RMET_RS06825 5fbff0ab52c90b487a28c37d399ae90f 263 Gene3D G3DSA:3.60.140.10 3 262 1.9E-94 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RMET_RS06825 5fbff0ab52c90b487a28c37d399ae90f 263 SUPERFAMILY SSF64438 4 262 4.21E-80 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic RMET_RS06825 5fbff0ab52c90b487a28c37d399ae90f 263 PANTHER PTHR30616:SF3 8 263 2.0E-116 T 22-04-2016 RMET_RS06825 5fbff0ab52c90b487a28c37d399ae90f 263 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 46 261 3.8E-52 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RMET_RS06825 5fbff0ab52c90b487a28c37d399ae90f 263 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 25 260 1.6E-72 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RMET_RS06825 5fbff0ab52c90b487a28c37d399ae90f 263 PANTHER PTHR30616 8 263 2.0E-116 T 22-04-2016 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 Gene3D G3DSA:3.30.43.10 15 110 3.2E-28 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 Gene3D G3DSA:1.10.45.10 433 472 1.3E-5 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 SUPERFAMILY SSF55103 206 475 2.94E-73 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 Pfam PF01565 FAD binding domain 57 195 4.3E-41 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 Gene3D G3DSA:3.30.465.10 112 232 9.1E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 SUPERFAMILY SSF56176 21 232 8.88E-70 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 PANTHER PTHR11748 13 491 2.7E-190 T 22-04-2016 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 471 1.7E-64 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RMET_RS14665 8836c12f18073874afa2c733d72455bd 500 PANTHER PTHR11748:SF78 13 491 2.7E-190 T 22-04-2016 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Gene3D G3DSA:3.40.50.1380 946 1080 6.8E-41 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1077 13.431 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Gene3D G3DSA:3.30.1490.20 692 749 3.8E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 SUPERFAMILY SSF52335 944 1080 6.54E-39 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 SUPERFAMILY SSF52440 561 680 3.02E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1061 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Gene3D G3DSA:3.30.1490.20 143 206 5.8E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 678 883 3.9E-35 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 3.2E-70 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 171 185 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 714 728 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PANTHER PTHR11405:SF5 1 1070 0.0 T 22-04-2016 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Gene3D G3DSA:3.30.470.20 207 406 1.4E-75 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Gene3D G3DSA:3.30.470.20 750 943 2.6E-79 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 SUPERFAMILY SSF56059 678 942 3.71E-103 T 22-04-2016 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Gene3D G3DSA:1.10.1030.10 407 539 7.8E-48 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PANTHER PTHR11405 1 1070 0.0 T 22-04-2016 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 SMART SM01096 426 549 6.2E-69 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Gene3D G3DSA:3.40.50.20 540 667 3.2E-60 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 SUPERFAMILY SSF56059 128 408 4.24E-106 T 22-04-2016 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 SUPERFAMILY SSF52440 1 127 7.63E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 SUPERFAMILY SSF48108 403 554 2.35E-49 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 847 854 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1072 13.181 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 1.9E-37 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 SMART SM00851 964 1051 3.4E-28 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Pfam PF02142 MGS-like domain 965 1051 2.2E-19 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 Gene3D G3DSA:3.40.50.20 3 108 2.0E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11010 f51c47954a120c0f5d02a53f86414ef4 1082 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 6.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 6.1E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 231 251 1.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 Gene3D G3DSA:3.40.50.720 2 269 8.6E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 Pfam PF00106 short chain dehydrogenase 8 198 3.6E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 SUPERFAMILY SSF51735 6 269 1.91E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PANTHER PTHR24322 12 148 1.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS13085 46b74f897d2c2f9c43457f0caa34ac6b 270 PANTHER PTHR24322 164 195 1.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 Gene3D G3DSA:1.10.357.10 65 205 1.8E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 SUPERFAMILY SSF46689 6 86 2.15E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 PANTHER PTHR30328 6 210 8.6E-59 T 22-04-2016 RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 SUPERFAMILY SSF48498 85 209 2.23E-37 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 Gene3D G3DSA:1.10.10.60 4 64 1.9E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS05110 18b506b64e41fa8e76c4de9ca413e6c2 210 PANTHER PTHR30328:SF16 6 210 8.6E-59 T 22-04-2016 RMET_RS01745 c4ce6ce1af264e34f31cc5ac5d75c1ad 441 Pfam PF00202 Aminotransferase class-III 10 435 1.4E-102 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS01745 c4ce6ce1af264e34f31cc5ac5d75c1ad 441 Gene3D G3DSA:3.40.640.10 48 311 3.6E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS01745 c4ce6ce1af264e34f31cc5ac5d75c1ad 441 SUPERFAMILY SSF53383 7 436 6.25E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS01745 c4ce6ce1af264e34f31cc5ac5d75c1ad 441 Gene3D G3DSA:3.90.1150.10 312 438 7.4E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS01745 c4ce6ce1af264e34f31cc5ac5d75c1ad 441 PANTHER PTHR11986 1 439 9.8E-204 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS01745 c4ce6ce1af264e34f31cc5ac5d75c1ad 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS01745 c4ce6ce1af264e34f31cc5ac5d75c1ad 441 PANTHER PTHR11986:SF78 1 439 9.8E-204 T 22-04-2016 RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 PANTHER PTHR10992 9 272 4.1E-51 T 22-04-2016 RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 Pfam PF00561 alpha/beta hydrolase fold 32 258 3.0E-25 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 4.5E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 4.5E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 4.5E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 4.5E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 SUPERFAMILY SSF53474 12 270 2.96E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 21 270 3.6E-78 T 22-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 Gene3D G3DSA:3.40.50.1820 13 271 5.9E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00435 48ca176d30b20e852b38d3d01faade42 282 PANTHER PTHR10992:SF771 9 272 4.1E-51 T 22-04-2016 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 Pfam PF00501 AMP-binding enzyme 62 502 4.2E-84 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 PANTHER PTHR24095:SF165 10 628 0.0 T 22-04-2016 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 Gene3D G3DSA:3.40.50.980 55 242 3.0E-37 T 22-04-2016 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 PANTHER PTHR24095 10 628 0.0 T 22-04-2016 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 Gene3D G3DSA:3.40.50.980 243 394 1.6E-26 T 22-04-2016 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 Pfam PF13193 AMP-binding enzyme C-terminal domain 511 594 4.2E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 Gene3D G3DSA:3.30.300.30 497 610 3.4E-26 T 22-04-2016 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 5 58 7.2E-23 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 SUPERFAMILY SSF56801 6 626 1.2E-159 T 22-04-2016 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 238 249 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 5 628 0.0 T 22-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 RMET_RS11060 7b94aa8fa48a46aab1a65fe226e9f53e 629 Gene3D G3DSA:2.30.38.10 414 496 7.0E-7 T 22-04-2016 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 Gene3D G3DSA:1.10.287.130 208 271 3.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 SUPERFAMILY SSF158472 166 214 3.92E-5 T 22-04-2016 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 Gene3D G3DSA:3.30.565.10 277 424 3.8E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 SMART SM00387 313 422 1.4E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 273 9.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 420 4.7E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 1.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 1.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 SUPERFAMILY SSF47384 201 273 4.12E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 SMART SM00304 165 217 1.0E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 SMART SM00388 218 276 1.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 SUPERFAMILY SSF55874 275 421 6.16E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 Pfam PF00672 HAMP domain 149 213 5.1E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 PANTHER PTHR24423 159 421 9.3E-47 T 22-04-2016 RMET_RS02610 16c4e2a5f06b7ae411d938fcd6abee8d 427 PANTHER PTHR24423 1 14 9.3E-47 T 22-04-2016 RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 Pfam PF00462 Glutaredoxin 4 64 5.1E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 Gene3D G3DSA:3.40.30.10 1 79 9.8E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.8E-32 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 PANTHER PTHR10168 3 83 1.1E-22 T 22-04-2016 RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 PRINTS PR00160 Glutaredoxin signature 47 60 2.9E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 PRINTS PR00160 Glutaredoxin signature 61 74 2.9E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 PRINTS PR00160 Glutaredoxin signature 4 22 2.9E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 RMET_RS01285 977caba78b1593c0ed288d3c5a53f0a3 85 SUPERFAMILY SSF52833 3 84 1.04E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12370 65a48b356df6dca905330aec941449b9 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 33.873 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 PANTHER PTHR10314:SF4 74 163 4.9E-23 T 22-04-2016 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 PANTHER PTHR10314:SF4 1 51 4.9E-23 T 22-04-2016 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 PANTHER PTHR10314 74 163 4.9E-23 T 22-04-2016 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 PANTHER PTHR10314 1 51 4.9E-23 T 22-04-2016 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 Gene3D G3DSA:3.20.20.70 2 264 2.3E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 Pfam PF00290 Tryptophan synthase alpha chain 8 253 3.4E-85 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 SUPERFAMILY SSF51366 1 250 1.6E-90 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 4.2E-75 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS12370 65a48b356df6dca905330aec941449b9 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS11230 54ed1076416e0153b48bd166c1780c2b 283 Gene3D G3DSA:3.90.79.10 100 278 8.0E-46 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS11230 54ed1076416e0153b48bd166c1780c2b 283 PANTHER PTHR13622:SF8 101 241 5.0E-36 T 22-04-2016 RMET_RS11230 54ed1076416e0153b48bd166c1780c2b 283 PANTHER PTHR13622 101 241 5.0E-36 T 22-04-2016 RMET_RS11230 54ed1076416e0153b48bd166c1780c2b 283 Pfam PF00293 NUDIX domain 144 254 3.9E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS11230 54ed1076416e0153b48bd166c1780c2b 283 Pfam PF15916 Domain of unknown function (DUF4743) 28 131 3.0E-17 T 22-04-2016 IPR031804 Domain of unknown function DUF4743 RMET_RS11230 54ed1076416e0153b48bd166c1780c2b 283 SUPERFAMILY SSF55811 117 276 8.26E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS20985 862485abf1999e76750344af49918293 259 Gene3D G3DSA:3.10.580.10 193 259 1.8E-10 T 22-04-2016 RMET_RS20985 862485abf1999e76750344af49918293 259 SUPERFAMILY SSF54631 207 259 2.62E-12 T 22-04-2016 RMET_RS20985 862485abf1999e76750344af49918293 259 Pfam PF00571 CBS domain 217 259 1.5E-7 T 22-04-2016 IPR000644 CBS domain RMET_RS20985 862485abf1999e76750344af49918293 259 PANTHER PTHR33741 7 257 1.1E-30 T 22-04-2016 RMET_RS20985 862485abf1999e76750344af49918293 259 Pfam PF04982 HPP family 30 149 1.2E-38 T 22-04-2016 IPR007065 HPP RMET_RS16835 0317207dabd59f8c2173dfdde06e9ec0 297 PANTHER PTHR32552:SF34 1 285 1.4E-62 T 22-04-2016 RMET_RS16835 0317207dabd59f8c2173dfdde06e9ec0 297 Gene3D G3DSA:3.30.420.10 123 282 4.1E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS16835 0317207dabd59f8c2173dfdde06e9ec0 297 Pfam PF00665 Integrase core domain 130 241 9.6E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS16835 0317207dabd59f8c2173dfdde06e9ec0 297 Pfam PF13276 HTH-like domain 49 105 1.0E-17 T 22-04-2016 IPR025948 HTH-like domain RMET_RS16835 0317207dabd59f8c2173dfdde06e9ec0 297 SUPERFAMILY SSF53098 122 288 2.53E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS16835 0317207dabd59f8c2173dfdde06e9ec0 297 PANTHER PTHR32552 1 285 1.4E-62 T 22-04-2016 RMET_RS00170 0317207dabd59f8c2173dfdde06e9ec0 297 PANTHER PTHR32552:SF34 1 285 1.4E-62 T 22-04-2016 RMET_RS00170 0317207dabd59f8c2173dfdde06e9ec0 297 Gene3D G3DSA:3.30.420.10 123 282 4.1E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS00170 0317207dabd59f8c2173dfdde06e9ec0 297 Pfam PF00665 Integrase core domain 130 241 9.6E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS00170 0317207dabd59f8c2173dfdde06e9ec0 297 Pfam PF13276 HTH-like domain 49 105 1.0E-17 T 22-04-2016 IPR025948 HTH-like domain RMET_RS00170 0317207dabd59f8c2173dfdde06e9ec0 297 SUPERFAMILY SSF53098 122 288 2.53E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS00170 0317207dabd59f8c2173dfdde06e9ec0 297 PANTHER PTHR32552 1 285 1.4E-62 T 22-04-2016 RMET_RS08110 0317207dabd59f8c2173dfdde06e9ec0 297 PANTHER PTHR32552:SF34 1 285 1.4E-62 T 22-04-2016 RMET_RS08110 0317207dabd59f8c2173dfdde06e9ec0 297 Gene3D G3DSA:3.30.420.10 123 282 4.1E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08110 0317207dabd59f8c2173dfdde06e9ec0 297 Pfam PF00665 Integrase core domain 130 241 9.6E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS08110 0317207dabd59f8c2173dfdde06e9ec0 297 Pfam PF13276 HTH-like domain 49 105 1.0E-17 T 22-04-2016 IPR025948 HTH-like domain RMET_RS08110 0317207dabd59f8c2173dfdde06e9ec0 297 SUPERFAMILY SSF53098 122 288 2.53E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08110 0317207dabd59f8c2173dfdde06e9ec0 297 PANTHER PTHR32552 1 285 1.4E-62 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 216 227 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Pfam PF00384 Molybdopterin oxidoreductase 300 718 7.2E-72 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 PANTHER PTHR11615 21 69 4.2E-245 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Gene3D G3DSA:3.10.20.30 13 73 8.9E-9 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 SMART SM00926 243 297 5.3E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 94 5.7E-24 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Gene3D G3DSA:2.20.25.90 257 298 2.1E-18 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Pfam PF00037 4Fe-4S binding domain 212 230 8.1E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 PANTHER PTHR11615 241 943 4.2E-245 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Pfam PF01568 Molydopterin dinucleotide binding domain 815 919 9.0E-29 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 173 184 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 853 880 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Gene3D G3DSA:3.40.50.740 570 772 1.6E-85 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Gene3D G3DSA:3.40.50.740 300 377 1.6E-85 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 248 923 3.6E-283 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 SMART SM00929 101 141 1.8E-18 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Gene3D G3DSA:3.40.228.10 378 569 2.5E-55 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 PIRSF PIRSF036643 15 954 0.0 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 SUPERFAMILY SSF50692 783 924 4.97E-43 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Gene3D G3DSA:3.30.70.20 158 222 1.8E-15 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Gene3D G3DSA:2.40.40.20 773 926 4.3E-43 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 SUPERFAMILY SSF53706 246 765 5.5E-190 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 PANTHER PTHR11615:SF112 241 943 4.2E-245 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 PANTHER PTHR11615:SF112 21 69 4.2E-245 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 4.5E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Gene3D G3DSA:3.30.70.20 223 256 4.7E-5 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 248 295 3.9E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 SUPERFAMILY SSF54862 93 236 2.51E-37 T 22-04-2016 RMET_RS02805 d9e687bddd1112b21cd530b43f12bae7 957 SUPERFAMILY SSF54292 19 92 1.37E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS16375 24153920447241677bdf2cda7d873c73 382 Pfam PF13286 Phosphohydrolase-associated domain 288 374 9.4E-29 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain RMET_RS16375 24153920447241677bdf2cda7d873c73 382 SUPERFAMILY SSF109604 23 376 8.05E-94 T 22-04-2016 RMET_RS16375 24153920447241677bdf2cda7d873c73 382 Pfam PF01966 HD domain 72 202 6.5E-16 T 22-04-2016 IPR006674 HD domain RMET_RS16375 24153920447241677bdf2cda7d873c73 382 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 12 376 38.359 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RMET_RS16375 24153920447241677bdf2cda7d873c73 382 SMART SM00471 68 212 3.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain RMET_RS16375 24153920447241677bdf2cda7d873c73 382 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 35 169 1.3E-57 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 RMET_RS16375 24153920447241677bdf2cda7d873c73 382 Gene3D G3DSA:1.10.3210.10 33 221 7.7E-84 T 22-04-2016 IPR006674 HD domain RMET_RS16375 24153920447241677bdf2cda7d873c73 382 Gene3D G3DSA:1.10.3210.10 278 377 7.7E-84 T 22-04-2016 IPR006674 HD domain RMET_RS16375 24153920447241677bdf2cda7d873c73 382 PANTHER PTHR11373:SF25 9 165 2.4E-85 T 22-04-2016 RMET_RS16375 24153920447241677bdf2cda7d873c73 382 PANTHER PTHR11373 9 165 2.4E-85 T 22-04-2016 RMET_RS03270 98cea34f9257fc80e70e1ea2c2711dd0 281 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 275 6.2E-82 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB RMET_RS03270 98cea34f9257fc80e70e1ea2c2711dd0 281 Pfam PF08666 SAF domain 38 98 3.2E-11 T 22-04-2016 IPR013974 SAF domain RMET_RS03270 98cea34f9257fc80e70e1ea2c2711dd0 281 SMART SM00858 37 99 3.4E-12 T 22-04-2016 IPR013974 SAF domain RMET_RS03270 98cea34f9257fc80e70e1ea2c2711dd0 281 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 105 212 1.5E-30 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain RMET_RS25925 c1ee310fb0da3b5b800d705211a76c5d 226 Pfam PF01546 Peptidase family M20/M25/M40 67 209 1.5E-18 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS25925 c1ee310fb0da3b5b800d705211a76c5d 226 PANTHER PTHR32494 1 226 1.6E-114 T 22-04-2016 RMET_RS25925 c1ee310fb0da3b5b800d705211a76c5d 226 PANTHER PTHR32494:SF6 1 226 1.6E-114 T 22-04-2016 RMET_RS25925 c1ee310fb0da3b5b800d705211a76c5d 226 SUPERFAMILY SSF53187 2 213 5.09E-68 T 22-04-2016 RMET_RS25925 c1ee310fb0da3b5b800d705211a76c5d 226 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 2 226 1.0E-75 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS25925 c1ee310fb0da3b5b800d705211a76c5d 226 Gene3D G3DSA:3.40.630.10 2 224 2.9E-84 T 22-04-2016 RMET_RS12710 edd123ba8f75b714e9aeebfbeecee2bc 324 PIRSF PIRSF017082 1 317 5.2E-63 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS12710 edd123ba8f75b714e9aeebfbeecee2bc 324 SUPERFAMILY SSF53850 111 275 5.1E-11 T 22-04-2016 RMET_RS12710 edd123ba8f75b714e9aeebfbeecee2bc 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 301 9.1E-70 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS12710 edd123ba8f75b714e9aeebfbeecee2bc 324 PANTHER PTHR30349 1 309 1.0E-73 T 22-04-2016 RMET_RS12710 edd123ba8f75b714e9aeebfbeecee2bc 324 PANTHER PTHR30349:SF32 1 309 1.0E-73 T 22-04-2016 RMET_RS09115 2ed913a666aa3e453cb096599b21588a 447 Pfam PF00924 Mechanosensitive ion channel 148 397 5.3E-40 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RMET_RS09115 2ed913a666aa3e453cb096599b21588a 447 SUPERFAMILY SSF50182 185 252 4.25E-10 T 22-04-2016 IPR010920 LSM domain RMET_RS09115 2ed913a666aa3e453cb096599b21588a 447 Gene3D G3DSA:2.30.30.60 202 252 2.6E-8 T 22-04-2016 RMET_RS09115 2ed913a666aa3e453cb096599b21588a 447 PANTHER PTHR30414:SF0 1 416 3.4E-136 T 22-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 RMET_RS09115 2ed913a666aa3e453cb096599b21588a 447 PANTHER PTHR30414 1 416 3.4E-136 T 22-04-2016 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 PANTHER PTHR10909:SF305 1 375 1.6E-176 T 22-04-2016 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 Gene3D G3DSA:2.40.110.10 119 219 8.0E-43 T 22-04-2016 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 5.8E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 3.5E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 SUPERFAMILY SSF47203 225 375 1.35E-59 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.0E-52 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 PANTHER PTHR10909 1 375 1.6E-176 T 22-04-2016 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 Gene3D G3DSA:1.10.540.10 3 117 6.4E-41 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 Gene3D G3DSA:1.20.140.10 220 375 7.0E-74 T 22-04-2016 RMET_RS00555 386d968cf20f9d615ac6a310c1e1fccc 376 SUPERFAMILY SSF56645 2 240 1.24E-85 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS15405 c0e5345af99112d0e95a26b80ca76fa8 749 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 173 1.5E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS15405 c0e5345af99112d0e95a26b80ca76fa8 749 Pfam PF00593 TonB dependent receptor 518 748 1.6E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS15405 c0e5345af99112d0e95a26b80ca76fa8 749 Gene3D G3DSA:2.40.170.20 187 748 5.4E-133 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS15405 c0e5345af99112d0e95a26b80ca76fa8 749 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 747 1.2E-92 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RMET_RS15405 c0e5345af99112d0e95a26b80ca76fa8 749 PANTHER PTHR32552:SF8 14 749 7.5E-140 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RMET_RS15405 c0e5345af99112d0e95a26b80ca76fa8 749 Gene3D G3DSA:2.170.130.10 40 182 2.9E-35 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS15405 c0e5345af99112d0e95a26b80ca76fa8 749 SUPERFAMILY SSF56935 38 748 2.15E-128 T 22-04-2016 RMET_RS15405 c0e5345af99112d0e95a26b80ca76fa8 749 PANTHER PTHR32552 14 749 7.5E-140 T 22-04-2016 RMET_RS01360 bdc23abb3c5f5e8174b22df6c5726c9a 239 Pfam PF02104 SURF1 family 6 214 1.2E-33 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 RMET_RS01360 bdc23abb3c5f5e8174b22df6c5726c9a 239 PANTHER PTHR23427:SF2 1 132 1.3E-15 T 22-04-2016 RMET_RS01360 bdc23abb3c5f5e8174b22df6c5726c9a 239 PANTHER PTHR23427 1 132 1.3E-15 T 22-04-2016 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 SUPERFAMILY SSF55781 566 713 1.37E-6 T 22-04-2016 IPR029016 GAF domain-like RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Pfam PF00512 His Kinase A (phospho-acceptor) domain 730 795 9.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Gene3D G3DSA:1.20.120.620 456 560 1.6E-38 T 22-04-2016 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Gene3D G3DSA:3.40.50.300 44 252 3.2E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PANTHER PTHR24423 274 330 8.3E-134 T 22-04-2016 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PANTHER PTHR24423 30 220 8.3E-134 T 22-04-2016 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PANTHER PTHR24423 727 947 8.3E-134 T 22-04-2016 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PRINTS PR00344 Bacterial sensor protein C-terminal signature 910 928 3.05E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PRINTS PR00344 Bacterial sensor protein C-terminal signature 895 905 3.05E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PRINTS PR00344 Bacterial sensor protein C-terminal signature 934 947 3.05E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 891 3.05E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 SMART SM00387 840 950 9.3E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 SMART SM00388 729 796 3.6E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 SUPERFAMILY SSF47384 724 796 1.88E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PANTHER PTHR24423:SF562 274 330 8.3E-134 T 22-04-2016 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PANTHER PTHR24423:SF562 30 220 8.3E-134 T 22-04-2016 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 PANTHER PTHR24423:SF562 727 947 8.3E-134 T 22-04-2016 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 45 253 1.1E-93 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Gene3D G3DSA:1.10.287.130 725 782 1.6E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Pfam PF13492 GAF domain 587 710 7.1E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Gene3D G3DSA:3.30.565.10 783 949 2.3E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Gene3D G3DSA:3.30.450.40 565 713 2.3E-6 T 22-04-2016 IPR029016 GAF domain-like RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 844 948 6.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 SUPERFAMILY SSF55874 786 950 4.85E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00220 25e6a46fb269b672fe671392085423ea 967 Pfam PF13493 Domain of unknown function (DUF4118) 460 566 2.8E-31 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 SUPERFAMILY SSF56507 579 905 1.07E-121 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 Gene3D G3DSA:3.40.50.280 420 573 2.7E-62 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 SUPERFAMILY SSF52242 417 572 6.02E-42 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 Gene3D G3DSA:3.20.20.20 17 297 9.4E-117 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 Pfam PF00809 Pterin binding enzyme 21 259 7.9E-60 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 SUPERFAMILY SSF51717 17 291 2.35E-91 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 Gene3D G3DSA:1.10.1240.10 319 404 8.0E-34 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 615 891 9.6E-117 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 SMART SM01018 320 407 1.1E-40 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 TIGRFAM TIGR02082 metH: methionine synthase 1 875 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 PIRSF PIRSF000381 1 878 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 Pfam PF02607 B12 binding domain 324 399 1.9E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 SUPERFAMILY SSF47644 321 406 3.92E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 Gene3D G3DSA:3.10.196.10 635 905 1.9E-95 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RMET_RS00455 23d740e9af359471992e8ddf194b8abf 905 Pfam PF02310 B12 binding domain 422 515 8.2E-17 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS03950 a0adf6ebe2f95486fc1766c237ec823d 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 214 1.7E-68 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS03950 a0adf6ebe2f95486fc1766c237ec823d 216 Gene3D G3DSA:3.40.50.2020 9 215 6.6E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS03950 a0adf6ebe2f95486fc1766c237ec823d 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 215 43.089 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RMET_RS03950 a0adf6ebe2f95486fc1766c237ec823d 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 12 215 1.8E-75 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RMET_RS03950 a0adf6ebe2f95486fc1766c237ec823d 216 PANTHER PTHR10285 11 204 1.6E-80 T 22-04-2016 RMET_RS03950 a0adf6ebe2f95486fc1766c237ec823d 216 SUPERFAMILY SSF53271 10 213 1.08E-60 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS10655 6b15413b0494c064f293b2f82ddbcf16 108 PIRSF PIRSF004555 2 108 6.4E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RMET_RS10655 6b15413b0494c064f293b2f82ddbcf16 108 SUPERFAMILY SSF82607 10 102 1.44E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RMET_RS10655 6b15413b0494c064f293b2f82ddbcf16 108 Gene3D G3DSA:3.30.1310.10 1 108 1.8E-50 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RMET_RS10655 6b15413b0494c064f293b2f82ddbcf16 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.125 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RMET_RS10655 6b15413b0494c064f293b2f82ddbcf16 108 PANTHER PTHR33449 1 108 1.3E-47 T 22-04-2016 RMET_RS10655 6b15413b0494c064f293b2f82ddbcf16 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 9.2E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RMET_RS10655 6b15413b0494c064f293b2f82ddbcf16 108 PANTHER PTHR33449:SF1 1 108 1.3E-47 T 22-04-2016 RMET_RS10655 6b15413b0494c064f293b2f82ddbcf16 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 9.4E-34 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RMET_RS17710 a8fd13d98f11e3f73db556e7b91c6cf9 66 PRINTS PR00944 Copper ion binding protein signature 49 62 7.2E-5 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RMET_RS17710 a8fd13d98f11e3f73db556e7b91c6cf9 66 PRINTS PR00944 Copper ion binding protein signature 1 13 7.2E-5 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RMET_RS17710 a8fd13d98f11e3f73db556e7b91c6cf9 66 PRINTS PR00944 Copper ion binding protein signature 13 26 7.2E-5 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RMET_RS17710 a8fd13d98f11e3f73db556e7b91c6cf9 66 Gene3D G3DSA:3.30.70.100 1 62 1.6E-21 T 22-04-2016 RMET_RS17710 a8fd13d98f11e3f73db556e7b91c6cf9 66 Pfam PF00403 Heavy-metal-associated domain 4 60 1.7E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS17710 a8fd13d98f11e3f73db556e7b91c6cf9 66 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RMET_RS17710 a8fd13d98f11e3f73db556e7b91c6cf9 66 SUPERFAMILY SSF55008 2 63 1.07E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS08565 e1054c8e2c7d45ed54cfbc2ad7b2e5a7 388 PANTHER PTHR21716:SF20 9 373 3.3E-62 T 22-04-2016 RMET_RS08565 e1054c8e2c7d45ed54cfbc2ad7b2e5a7 388 PANTHER PTHR21716 9 373 3.3E-62 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RMET_RS08565 e1054c8e2c7d45ed54cfbc2ad7b2e5a7 388 Pfam PF01594 Domain of unknown function DUF20 22 348 6.9E-23 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RMET_RS17135 44e6112b1ff7996f681b98e29763e8f1 338 PANTHER PTHR30349:SF32 17 296 7.4E-82 T 22-04-2016 RMET_RS17135 44e6112b1ff7996f681b98e29763e8f1 338 PIRSF PIRSF017082 6 338 6.1E-78 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS17135 44e6112b1ff7996f681b98e29763e8f1 338 SUPERFAMILY SSF53850 135 301 1.4E-11 T 22-04-2016 RMET_RS17135 44e6112b1ff7996f681b98e29763e8f1 338 PANTHER PTHR30349 17 296 7.4E-82 T 22-04-2016 RMET_RS17135 44e6112b1ff7996f681b98e29763e8f1 338 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 64 334 5.4E-80 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 219 1.8E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 378 5.1E-38 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 SUPERFAMILY SSF56645 6 243 1.96E-85 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 PANTHER PTHR10909:SF190 1 379 5.7E-181 T 22-04-2016 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 126 138 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 Gene3D G3DSA:2.40.110.10 124 219 2.8E-40 T 22-04-2016 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 Gene3D G3DSA:1.10.540.10 8 121 3.0E-38 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 Gene3D G3DSA:1.20.140.10 220 379 3.0E-52 T 22-04-2016 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 SUPERFAMILY SSF47203 231 378 4.19E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 PANTHER PTHR10909 1 379 5.7E-181 T 22-04-2016 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS12690 e66b10ef6805bedf7469a962f8efac18 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 119 1.8E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS09775 c34c06036456d3267ec55afab46954ce 182 Gene3D G3DSA:3.40.30.10 4 181 1.9E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS09775 c34c06036456d3267ec55afab46954ce 182 PANTHER PTHR10681 11 182 7.7E-75 T 22-04-2016 RMET_RS09775 c34c06036456d3267ec55afab46954ce 182 SUPERFAMILY SSF52833 18 181 4.59E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS09775 c34c06036456d3267ec55afab46954ce 182 PANTHER PTHR10681:SF87 11 182 7.7E-75 T 22-04-2016 RMET_RS09775 c34c06036456d3267ec55afab46954ce 182 PIRSF PIRSF000239 1 182 7.7E-41 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RMET_RS09775 c34c06036456d3267ec55afab46954ce 182 Pfam PF00578 AhpC/TSA family 28 143 1.7E-25 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 SUPERFAMILY SSF56954 2 31 1.24E-96 T 22-04-2016 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 SUPERFAMILY SSF56954 64 478 1.24E-96 T 22-04-2016 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 PANTHER PTHR30203:SF3 2 487 3.7E-87 T 22-04-2016 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 476 5.3E-122 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 Gene3D G3DSA:2.20.200.10 110 153 4.5E-14 T 22-04-2016 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 Gene3D G3DSA:2.20.200.10 327 357 4.5E-14 T 22-04-2016 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 Pfam PF02321 Outer membrane efflux protein 73 266 2.4E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 Pfam PF02321 Outer membrane efflux protein 295 474 3.2E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 Gene3D G3DSA:1.20.1600.10 61 99 2.3E-81 T 22-04-2016 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 Gene3D G3DSA:1.20.1600.10 363 477 2.3E-81 T 22-04-2016 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 Gene3D G3DSA:1.20.1600.10 154 326 2.3E-81 T 22-04-2016 RMET_RS01760 af5882d4e3bc9c67d80b7b3ff6d1c8f3 488 PANTHER PTHR30203 2 487 3.7E-87 T 22-04-2016 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 Gene3D G3DSA:1.10.10.10 120 209 3.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 PANTHER PTHR26402:SF151 2 209 2.7E-67 T 22-04-2016 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.37E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.37E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.37E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 SUPERFAMILY SSF52172 1 133 1.71E-35 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 9.5E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 Pfam PF00072 Response regulator receiver domain 4 116 9.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 SMART SM00421 146 203 1.6E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 SUPERFAMILY SSF46894 141 209 3.2E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 SMART SM00448 2 115 1.0E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 PANTHER PTHR26402 2 209 2.7E-67 T 22-04-2016 RMET_RS00465 74e132dcd30daa021472a9bdb5e8ca7c 210 Gene3D G3DSA:3.40.50.2300 1 119 2.1E-37 T 22-04-2016 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 Gene3D G3DSA:3.30.559.10 318 554 1.5E-85 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 SUPERFAMILY SSF52777 316 554 1.56E-85 T 22-04-2016 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 Gene3D G3DSA:4.10.320.10 247 295 3.1E-19 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 SUPERFAMILY SSF47005 246 289 4.97E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 PANTHER PTHR23151 25 291 2.1E-251 T 22-04-2016 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 PANTHER PTHR23151 310 554 2.1E-251 T 22-04-2016 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 SUPERFAMILY SSF51230 3 97 1.11E-24 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 Gene3D G3DSA:2.40.50.100 5 81 1.2E-23 T 22-04-2016 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 SUPERFAMILY SSF51230 124 217 8.9E-25 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 Gene3D G3DSA:2.40.50.100 124 217 2.6E-24 T 22-04-2016 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 Pfam PF02817 e3 binding domain 251 285 4.1E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 114 554 6.8E-192 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 327 553 4.2E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 PANTHER PTHR23151:SF68 25 291 2.1E-251 T 22-04-2016 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 PANTHER PTHR23151:SF68 310 554 2.1E-251 T 22-04-2016 RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 Pfam PF00364 Biotin-requiring enzyme 126 197 2.0E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RMET_RS06040 46c06ec77d0feff77edde491a6acbf2b 554 Pfam PF00364 Biotin-requiring enzyme 6 77 2.0E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 Gene3D G3DSA:3.40.50.10490 249 445 1.6E-71 T 22-04-2016 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 Gene3D G3DSA:3.40.50.10490 446 612 5.4E-63 T 22-04-2016 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 Gene3D G3DSA:3.60.20.10 2 239 7.1E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 Pfam PF01380 SIS domain 295 420 2.3E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 Pfam PF01380 SIS domain 466 593 2.3E-23 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 PANTHER PTHR10937 1 612 1.8E-301 T 22-04-2016 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 38.906 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 SUPERFAMILY SSF56235 2 240 7.03E-69 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 8.5E-247 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 SUPERFAMILY SSF53697 250 612 2.97E-109 T 22-04-2016 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 PANTHER PTHR10937:SF0 1 612 1.8E-301 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RMET_RS00950 ba0034cd36be4b6c9d5ba893cdd4e7d4 612 Pfam PF13522 Glutamine amidotransferase domain 64 197 6.0E-22 T 22-04-2016 RMET_RS09250 bd53ddb910a9700d333e4d162e4fdbd5 277 SMART SM01007 43 223 4.8E-62 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS09250 bd53ddb910a9700d333e4d162e4fdbd5 277 SUPERFAMILY SSF53639 37 260 1.29E-69 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS09250 bd53ddb910a9700d333e4d162e4fdbd5 277 PANTHER PTHR10672 24 272 3.7E-130 T 22-04-2016 RMET_RS09250 bd53ddb910a9700d333e4d162e4fdbd5 277 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 43 223 1.5E-49 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS09250 bd53ddb910a9700d333e4d162e4fdbd5 277 PANTHER PTHR10672:SF17 24 272 3.7E-130 T 22-04-2016 RMET_RS09250 bd53ddb910a9700d333e4d162e4fdbd5 277 Gene3D G3DSA:3.40.225.10 38 258 2.7E-67 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 57 2.0E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 PANTHER PTHR21109 1 60 1.8E-21 T 22-04-2016 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.161 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.8E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 Pfam PF01165 Ribosomal protein S21 4 57 9.2E-21 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.8E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.8E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.8E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS13120 5535deee0b4d160c73be126aeea77edf 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.8E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS04960 31b7a7ff27213463e0032d8fa17bf30e 292 SUPERFAMILY SSF52540 24 248 5.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04960 31b7a7ff27213463e0032d8fa17bf30e 292 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 41 188 5.9E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS04960 31b7a7ff27213463e0032d8fa17bf30e 292 SMART SM00382 37 195 1.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS04960 31b7a7ff27213463e0032d8fa17bf30e 292 Gene3D G3DSA:3.40.50.300 9 50 2.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04960 31b7a7ff27213463e0032d8fa17bf30e 292 Gene3D G3DSA:3.40.50.300 51 243 7.0E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04960 31b7a7ff27213463e0032d8fa17bf30e 292 PANTHER PTHR22908 15 247 3.0E-74 T 22-04-2016 RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 PANTHER PTHR11921 3 231 1.1E-130 T 22-04-2016 RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 Gene3D G3DSA:3.10.20.30 2 102 7.3E-38 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 PANTHER PTHR11921:SF29 3 231 1.1E-130 T 22-04-2016 RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 Pfam PF13534 4Fe-4S dicluster domain 143 216 4.5E-9 T 22-04-2016 RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 107 1.9E-32 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 Gene3D G3DSA:1.10.1060.10 103 231 4.6E-47 T 22-04-2016 RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 SUPERFAMILY SSF46548 103 230 5.76E-38 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 SUPERFAMILY SSF54292 2 102 1.1E-28 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS12460 55f81d0af7baeae131572b34281d7507 233 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 225 4.5E-84 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 Gene3D G3DSA:1.10.3810.10 72 246 1.2E-71 T 22-04-2016 RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 SUPERFAMILY SSF56601 414 739 4.02E-112 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 SUPERFAMILY SSF56601 226 248 4.02E-112 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 SUPERFAMILY SSF56601 277 328 4.02E-112 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 SUPERFAMILY SSF53955 58 270 1.04E-74 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 Pfam PF00912 Transglycosylase 72 245 6.8E-63 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 PANTHER PTHR32282:SF5 413 715 3.0E-209 T 22-04-2016 RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 PANTHER PTHR32282:SF5 24 325 3.0E-209 T 22-04-2016 RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 Gene3D G3DSA:3.40.710.10 247 328 1.3E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 Gene3D G3DSA:3.40.710.10 412 730 1.3E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 80 699 1.4E-172 T 22-04-2016 RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 PANTHER PTHR32282 413 715 3.0E-209 T 22-04-2016 RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 PANTHER PTHR32282 24 325 3.0E-209 T 22-04-2016 RMET_RS10805 e3e537bce255e113a65a38c15ff19b4c 773 Pfam PF00905 Penicillin binding protein transpeptidase domain 419 662 1.1E-32 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 21.911 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 PANTHER PTHR18937 404 1170 1.6E-266 T 22-04-2016 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 PIRSF PIRSF005719 1 1170 1.2E-250 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 PANTHER PTHR18937:SF261 404 1170 1.6E-266 T 22-04-2016 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1154 3.7E-64 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 SMART SM00968 518 625 2.4E-9 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 Gene3D G3DSA:3.40.50.300 1011 1164 8.7E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 Gene3D G3DSA:3.40.50.300 2 166 8.7E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 PANTHER PTHR18937 2 384 1.6E-266 T 22-04-2016 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 SUPERFAMILY SSF75553 480 672 2.62E-8 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 Pfam PF06470 SMC proteins Flexible Hinge Domain 522 623 1.2E-5 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 PANTHER PTHR18937:SF261 2 384 1.6E-266 T 22-04-2016 RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 SUPERFAMILY SSF52540 2 210 1.63E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07185 4e176542e1241075e7dbb6eef6d79d53 1171 SUPERFAMILY SSF52540 960 1162 1.63E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 SUPERFAMILY SSF109998 260 443 1.28E-50 T 22-04-2016 IPR027304 Trigger factor/SurA domain RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 SUPERFAMILY SSF54534 98 253 2.95E-28 T 22-04-2016 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 PIRSF PIRSF003095 1 449 7.5E-128 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 168 249 1.8E-13 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 SUPERFAMILY SSF102735 1 131 3.01E-30 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 PANTHER PTHR30560 1 445 1.0E-105 T 22-04-2016 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 TIGRFAM TIGR00115 tig: trigger factor 12 426 3.7E-127 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 Pfam PF05697 Bacterial trigger factor protein (TF) 2 143 1.2E-32 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 Gene3D G3DSA:1.10.3120.10 216 404 3.0E-63 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 Gene3D G3DSA:3.30.70.1050 1 119 3.6E-30 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 274 427 1.2E-37 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 PANTHER PTHR30560:SF3 1 445 1.0E-105 T 22-04-2016 RMET_RS09455 028dc175cfea37fa11d6369d8cc94850 449 Hamap MF_00303 Trigger factor [tig]. 1 433 20.742 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 PANTHER PTHR33695 27 173 1.8E-50 T 22-04-2016 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 24 178 17.439 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 117 132 8.2E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 153 169 8.2E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 70 78 8.2E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 ProSitePatterns PS00855 Signal peptidases II signature. 120 132 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 PANTHER PTHR33695:SF1 27 173 1.8E-50 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 Pfam PF01252 Signal peptidase (SPase) II 33 171 1.5E-39 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS14465 1f5637a20c76e2eeda9962ec027065d5 178 TIGRFAM TIGR00077 lspA: signal peptidase II 28 175 1.0E-43 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS08920 e8f024ca20b656626b82823edbee9e5e 305 SUPERFAMILY SSF49482 3 291 3.14E-95 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RMET_RS08920 e8f024ca20b656626b82823edbee9e5e 305 PANTHER PTHR33711 1 301 9.7E-90 T 22-04-2016 RMET_RS08920 e8f024ca20b656626b82823edbee9e5e 305 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 4 284 1.8E-133 T 22-04-2016 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1|UniPathway: UPA00157 RMET_RS08920 e8f024ca20b656626b82823edbee9e5e 305 Gene3D G3DSA:2.60.130.10 2 301 9.7E-102 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RMET_RS08920 e8f024ca20b656626b82823edbee9e5e 305 Pfam PF00775 Dioxygenase 100 285 6.7E-62 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RMET_RS08920 e8f024ca20b656626b82823edbee9e5e 305 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 130 158 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RMET_RS08920 e8f024ca20b656626b82823edbee9e5e 305 Pfam PF04444 Catechol dioxygenase N terminus 22 90 3.8E-20 T 22-04-2016 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 RMET_RS08920 e8f024ca20b656626b82823edbee9e5e 305 PANTHER PTHR33711:SF4 1 301 9.7E-90 T 22-04-2016 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 Gene3D G3DSA:3.40.50.1360 78 225 5.0E-14 T 22-04-2016 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 Gene3D G3DSA:1.10.10.10 1 55 1.7E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 Pfam PF00455 DeoR C terminal sensor domain 78 235 6.6E-42 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 SMART SM00420 6 58 3.6E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 SUPERFAMILY SSF46785 4 59 5.27E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 SUPERFAMILY SSF100950 77 237 5.58E-30 T 22-04-2016 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 PANTHER PTHR30363 1 258 1.4E-66 T 22-04-2016 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 SMART SM01134 76 237 1.2E-60 T 22-04-2016 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 2.6E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 PANTHER PTHR30363:SF1 1 258 1.4E-66 T 22-04-2016 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.6E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RMET_RS13020 c7e44bd309a77ab6e9cb34c741ad396a 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.6E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 SUPERFAMILY SSF54292 1 89 3.8E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 Gene3D G3DSA:3.10.20.30 2 89 1.9E-25 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 Pfam PF00970 Oxidoreductase FAD-binding domain 108 202 1.2E-11 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 SUPERFAMILY SSF52343 206 339 1.44E-35 T 22-04-2016 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 3.2E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 Gene3D G3DSA:3.40.50.80 207 339 4.2E-37 T 22-04-2016 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 7.8E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 7.8E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 306 314 7.8E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 7.8E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 7.8E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 197 206 7.8E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 Gene3D G3DSA:2.40.30.10 105 203 6.9E-25 T 22-04-2016 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 SUPERFAMILY SSF63380 105 203 6.81E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 238 247 1.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 161 1.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 232 1.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 306 314 1.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 137 147 1.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 Pfam PF00175 Oxidoreductase NAD-binding domain 214 318 1.5E-17 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PANTHER PTHR19370 27 356 1.0E-64 T 22-04-2016 RMET_RS08925 6c9b1edd2dfad8396de1d139873b0c98 356 PANTHER PTHR19370:SF32 27 356 1.0E-64 T 22-04-2016 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PIRSF PIRSF000724 4 396 6.3E-131 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 19 29 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 Gene3D G3DSA:3.40.50.1260 14 179 9.6E-58 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 36 58 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 14 30 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 2.4E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 Pfam PF00162 Phosphoglycerate kinase 14 383 7.8E-133 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 37.672 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 PANTHER PTHR11406 17 396 4.4E-173 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 Gene3D G3DSA:3.40.50.1270 180 381 1.0E-80 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07625 ac170b965387b25e5d5138a08886c532 396 SUPERFAMILY SSF53748 14 392 6.36E-135 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 SUPERFAMILY SSF56420 1 165 1.44E-57 T 22-04-2016 IPR023635 Peptide deformylase RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 PIRSF PIRSF004749 1 169 4.1E-48 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 Gene3D G3DSA:3.90.45.10 1 164 1.4E-54 T 22-04-2016 IPR023635 Peptide deformylase RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 Pfam PF01327 Polypeptide deformylase 3 158 2.6E-48 T 22-04-2016 IPR023635 Peptide deformylase RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 PANTHER PTHR10458 1 165 4.5E-75 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 PANTHER PTHR10458:SF4 1 165 4.5E-75 T 22-04-2016 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 Hamap MF_00163 Peptide deformylase [def]. 1 170 26.589 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 PRINTS PR01576 Peptide deformylase signature 33 62 1.4E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 PRINTS PR01576 Peptide deformylase signature 128 157 1.4E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 PRINTS PR01576 Peptide deformylase signature 109 127 1.4E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 PRINTS PR01576 Peptide deformylase signature 97 108 1.4E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS07200 7d8f44a76a1139089dccc15ad13c2799 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 8.5E-34 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS02955 1bac68a33099a8e4c7ed816a290b2bec 292 Gene3D G3DSA:3.75.10.10 7 279 5.0E-51 T 22-04-2016 RMET_RS02955 1bac68a33099a8e4c7ed816a290b2bec 292 PANTHER PTHR12737:SF20 7 286 1.4E-67 T 22-04-2016 RMET_RS02955 1bac68a33099a8e4c7ed816a290b2bec 292 Pfam PF02274 Amidinotransferase 39 279 3.3E-26 T 22-04-2016 RMET_RS02955 1bac68a33099a8e4c7ed816a290b2bec 292 SUPERFAMILY SSF55909 3 282 3.03E-62 T 22-04-2016 RMET_RS02955 1bac68a33099a8e4c7ed816a290b2bec 292 PANTHER PTHR12737 7 286 1.4E-67 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 PANTHER PTHR32432 1 378 1.6E-155 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Pfam PF14450 Cell division protein FtsA 206 373 1.2E-25 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Pfam PF14450 Cell division protein FtsA 10 193 8.0E-12 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 SUPERFAMILY SSF53067 7 196 1.42E-63 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Gene3D G3DSA:3.30.420.40 3 82 2.7E-26 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Gene3D G3DSA:3.30.420.40 157 208 2.7E-26 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 SUPERFAMILY SSF53067 197 375 2.49E-48 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 PANTHER PTHR32432:SF4 1 378 1.6E-155 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Gene3D G3DSA:3.30.1490.110 85 156 1.0E-18 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 410 31.388 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Gene3D G3DSA:3.30.420.40 209 233 1.9E-32 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Gene3D G3DSA:3.30.420.40 297 351 1.9E-32 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Gene3D G3DSA:3.90.640.10 234 296 5.5E-19 T 22-04-2016 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 SMART SM00842 9 195 1.3E-107 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 376 5.7E-147 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 6.4E-33 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RMET_RS15645 2812a36b0b20a912ad3cb64c4c72d915 410 PIRSF PIRSF003101 1 410 3.8E-152 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 Pfam PF00107 Zinc-binding dehydrogenase 184 313 4.5E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 SMART SM00829 8 351 1.6E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 SUPERFAMILY SSF50129 1 186 2.13E-48 T 22-04-2016 IPR011032 GroES-like RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 Gene3D G3DSA:3.40.50.720 177 294 4.0E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 PANTHER PTHR11695 12 353 6.1E-91 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 136 6.0E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 SUPERFAMILY SSF51735 146 317 1.61E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 PANTHER PTHR11695:SF281 12 353 6.1E-91 T 22-04-2016 RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RMET_RS06595 77dc16ce8236d46566e0b38cc3049850 353 Gene3D G3DSA:3.90.180.10 1 176 1.5E-45 T 22-04-2016 IPR011032 GroES-like RMET_RS11140 882657e12c055aca043a49d651bc6971 341 Pfam PF09084 NMT1/THI5 like 58 271 1.1E-22 T 22-04-2016 IPR015168 SsuA/THI5-like RMET_RS11140 882657e12c055aca043a49d651bc6971 341 SUPERFAMILY SSF53850 58 328 6.95E-36 T 22-04-2016 RMET_RS11140 882657e12c055aca043a49d651bc6971 341 PANTHER PTHR30024 3 274 1.2E-52 T 22-04-2016 RMET_RS11140 882657e12c055aca043a49d651bc6971 341 PANTHER PTHR30024:SF14 3 274 1.2E-52 T 22-04-2016 RMET_RS11140 882657e12c055aca043a49d651bc6971 341 Gene3D G3DSA:3.40.190.10 128 214 1.9E-10 T 22-04-2016 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 SUPERFAMILY SSF52540 558 792 2.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Pfam PF05190 MutS family domain IV 419 510 1.7E-31 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Pfam PF05188 MutS domain II 120 244 3.4E-18 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 682 698 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 854 24.231 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Gene3D G3DSA:3.40.1170.10 1 111 6.0E-47 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 859 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 SUPERFAMILY SSF48334 259 556 2.62E-86 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 PANTHER PTHR11361:SF86 1 794 0.0 T 22-04-2016 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 SUPERFAMILY SSF53150 108 272 6.8E-35 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 SMART SM00534 601 788 1.7E-111 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Pfam PF05192 MutS domain III 261 550 1.5E-33 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Gene3D G3DSA:3.30.420.110 118 247 5.4E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 PANTHER PTHR11361 1 794 0.0 T 22-04-2016 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 SUPERFAMILY SSF55271 1 106 3.01E-40 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Pfam PF00488 MutS domain V 605 790 2.5E-81 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Gene3D G3DSA:1.10.1420.10 311 468 3.4E-48 T 22-04-2016 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 SMART SM00533 275 582 7.0E-93 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Pfam PF01624 MutS domain I 1 110 3.9E-40 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 RMET_RS05405 ce0a2cac62c067e7c99136ca98e319a2 868 Gene3D G3DSA:3.40.50.300 559 792 1.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 SUPERFAMILY SSF52518 19 343 4.0E-115 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 Pfam PF02779 Transketolase, pyrimidine binding domain 368 538 4.7E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 Pfam PF02780 Transketolase, C-terminal domain 554 664 1.8E-13 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 Gene3D G3DSA:3.40.50.970 340 547 1.2E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 TIGRFAM TIGR00232 tktlase_bact: transketolase 20 673 1.9E-270 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 Gene3D G3DSA:3.40.50.920 552 674 2.7E-38 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 Gene3D G3DSA:3.40.50.970 18 334 8.8E-124 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 SMART SM00861 368 540 1.1E-72 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 PANTHER PTHR11624 13 321 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 PANTHER PTHR11624 355 684 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 SUPERFAMILY SSF52518 365 540 3.44E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 19 347 6.2E-150 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 PANTHER PTHR11624:SF1 13 321 0.0 T 22-04-2016 RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 PANTHER PTHR11624:SF1 355 684 0.0 T 22-04-2016 RMET_RS07610 2bcc7a1077d393f4fafac1c3cb002d0e 684 SUPERFAMILY SSF52922 548 674 1.7E-39 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RMET_RS28905 da358b2b1eb943b3c39ad97b163dcb8c 177 Gene3D G3DSA:1.10.530.10 1 122 9.4E-35 T 22-04-2016 RMET_RS28905 da358b2b1eb943b3c39ad97b163dcb8c 177 PANTHER PTHR21666 1 177 3.6E-67 T 22-04-2016 RMET_RS28905 da358b2b1eb943b3c39ad97b163dcb8c 177 SUPERFAMILY SSF53955 2 125 8.81E-31 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS28905 da358b2b1eb943b3c39ad97b163dcb8c 177 PANTHER PTHR21666:SF206 1 177 3.6E-67 T 22-04-2016 RMET_RS28905 da358b2b1eb943b3c39ad97b163dcb8c 177 Pfam PF01464 Transglycosylase SLT domain 2 76 1.0E-17 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RMET_RS01125 9fedee0a1c2095f4f87c8ec7c55b3009 150 PANTHER PTHR35813 7 143 8.3E-45 T 22-04-2016 RMET_RS01125 9fedee0a1c2095f4f87c8ec7c55b3009 150 Pfam PF04304 Protein of unknown function (DUF454) 20 135 1.2E-42 T 22-04-2016 IPR007401 Protein of unknown function DUF454 RMET_RS01125 9fedee0a1c2095f4f87c8ec7c55b3009 150 PANTHER PTHR35813:SF1 7 143 8.3E-45 T 22-04-2016 RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 SUPERFAMILY SSF55031 221 331 1.2E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 Gene3D G3DSA:3.40.630.10 358 416 5.6E-95 T 22-04-2016 RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 Gene3D G3DSA:3.40.630.10 9 233 5.6E-95 T 22-04-2016 RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 PIRSF PIRSF001235 8 420 4.9E-116 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 Gene3D G3DSA:3.30.70.360 234 330 2.3E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 PANTHER PTHR32494 8 414 6.4E-134 T 22-04-2016 RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 SUPERFAMILY SSF53187 10 231 1.97E-77 T 22-04-2016 RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 SUPERFAMILY SSF53187 343 416 1.97E-77 T 22-04-2016 RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 24 411 1.3E-101 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS09750 7766f64777b0a1cdbed61819250dfc98 420 Pfam PF01546 Peptidase family M20/M25/M40 81 414 9.4E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS02795 2180e071990d5c1b46698a4a2f9eeb1b 169 PANTHER PTHR10371 30 165 2.3E-46 T 22-04-2016 RMET_RS02795 2180e071990d5c1b46698a4a2f9eeb1b 169 SUPERFAMILY SSF52833 16 165 3.69E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS02795 2180e071990d5c1b46698a4a2f9eeb1b 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 119 137 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RMET_RS02795 2180e071990d5c1b46698a4a2f9eeb1b 169 PIRSF PIRSF000216 6 169 2.4E-50 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RMET_RS02795 2180e071990d5c1b46698a4a2f9eeb1b 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 19 161 3.2E-45 T 22-04-2016 RMET_RS02795 2180e071990d5c1b46698a4a2f9eeb1b 169 Gene3D G3DSA:3.40.30.10 82 163 5.8E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 Gene3D G3DSA:1.20.970.10 24 89 1.9E-26 T 22-04-2016 RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 Gene3D G3DSA:3.40.1030.10 94 358 4.4E-108 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 28 354 2.9E-126 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 25 355 37.307 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 SUPERFAMILY SSF52418 96 358 6.28E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 SUPERFAMILY SSF47648 22 89 1.13E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 Pfam PF00591 Glycosyl transferase family, a/b domain 95 345 9.2E-94 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 Pfam PF02885 Glycosyl transferase family, helical bundle domain 25 86 8.2E-13 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 PANTHER PTHR11922:SF5 16 358 1.8E-115 T 22-04-2016 RMET_RS15945 71c35e7d2dc32c0d3e7cd3b80352969d 360 PANTHER PTHR11922 16 358 1.8E-115 T 22-04-2016 RMET_RS04095 2b81d9da4f272be8abd3780a4ffd4c5b 76 SUPERFAMILY SSF55174 4 65 2.75E-16 T 22-04-2016 RMET_RS04095 2b81d9da4f272be8abd3780a4ffd4c5b 76 PANTHER PTHR32319 9 61 1.7E-15 T 22-04-2016 RMET_RS04095 2b81d9da4f272be8abd3780a4ffd4c5b 76 Gene3D G3DSA:3.10.290.10 3 66 1.6E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS04095 2b81d9da4f272be8abd3780a4ffd4c5b 76 Pfam PF13275 S4 domain 8 65 1.5E-21 T 22-04-2016 RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 Gene3D G3DSA:3.40.50.980 231 376 9.0E-50 T 22-04-2016 RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 PANTHER PTHR24095 15 567 1.6E-207 T 22-04-2016 RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 SUPERFAMILY SSF56801 23 560 1.44E-162 T 22-04-2016 RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 ProSitePatterns PS00455 Putative AMP-binding domain signature. 216 227 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 Gene3D G3DSA:2.30.38.10 384 458 1.4E-27 T 22-04-2016 RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 549 1.3E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 Pfam PF00501 AMP-binding enzyme 37 465 1.7E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 Gene3D G3DSA:3.30.300.30 462 562 5.5E-36 T 22-04-2016 RMET_RS03085 7cf594b528a87ab6f87b2ff4814552d6 570 Gene3D G3DSA:3.40.50.980 29 230 1.1E-36 T 22-04-2016 RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 PANTHER PTHR11601 8 406 1.0E-233 T 22-04-2016 RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 PANTHER PTHR11601:SF34 8 406 1.0E-233 T 22-04-2016 RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 SUPERFAMILY SSF53383 8 392 2.55E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 5 397 54.482 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 Gene3D G3DSA:3.90.1150.10 257 376 3.9E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 Pfam PF00266 Aminotransferase class-V 9 370 2.3E-85 T 22-04-2016 IPR000192 Aminotransferase class V domain RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 PIRSF PIRSF005572 6 386 8.3E-134 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 Gene3D G3DSA:3.40.640.10 21 256 1.6E-97 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RMET_RS05155 a5e257d05f87cd761e3f5b62df1211e4 406 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 7 406 2.7E-228 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RMET_RS04485 6f70174c32f4fa00a501ddfe8754c25d 354 Hamap MF_01962 Adenine deaminase. 10 322 84.79 T 22-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 RMET_RS04485 6f70174c32f4fa00a501ddfe8754c25d 354 SUPERFAMILY SSF51556 10 341 4.19E-90 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS04485 6f70174c32f4fa00a501ddfe8754c25d 354 PANTHER PTHR11409:SF41 1 334 2.7E-152 T 22-04-2016 RMET_RS04485 6f70174c32f4fa00a501ddfe8754c25d 354 PANTHER PTHR11409 1 334 2.7E-152 T 22-04-2016 RMET_RS04485 6f70174c32f4fa00a501ddfe8754c25d 354 Pfam PF00962 Adenosine/AMP deaminase 14 330 1.4E-75 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 RMET_RS04485 6f70174c32f4fa00a501ddfe8754c25d 354 Gene3D G3DSA:3.20.20.140 11 337 1.3E-106 T 22-04-2016 RMET_RS04485 6f70174c32f4fa00a501ddfe8754c25d 354 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 15 333 2.1E-114 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 RMET_RS02505 1137e6f4004ab96fea9a1f095a4441ac 505 Pfam PF01425 Amidase 49 485 4.6E-91 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS02505 1137e6f4004ab96fea9a1f095a4441ac 505 PANTHER PTHR11895 61 504 3.9E-124 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS02505 1137e6f4004ab96fea9a1f095a4441ac 505 Gene3D G3DSA:3.90.1300.10 30 503 1.1E-115 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS02505 1137e6f4004ab96fea9a1f095a4441ac 505 PANTHER PTHR11895:SF55 61 504 3.9E-124 T 22-04-2016 RMET_RS02505 1137e6f4004ab96fea9a1f095a4441ac 505 SUPERFAMILY SSF75304 26 496 1.96E-114 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 354 3.0E-138 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 SUPERFAMILY SSF49493 263 349 6.67E-24 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Pfam PF00226 DnaJ domain 5 67 5.9E-30 T 22-04-2016 IPR001623 DnaJ domain RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 PANTHER PTHR24078 1 352 1.1E-156 T 22-04-2016 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 SMART SM00271 4 62 3.3E-35 T 22-04-2016 IPR001623 DnaJ domain RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Gene3D G3DSA:2.10.230.10 147 214 3.0E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 SUPERFAMILY SSF57938 139 215 5.36E-22 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 SUPERFAMILY SSF46565 1 114 2.09E-38 T 22-04-2016 IPR001623 DnaJ domain RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Gene3D G3DSA:2.60.260.20 261 338 1.6E-24 T 22-04-2016 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 377 41.918 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 SUPERFAMILY SSF49493 218 265 1.57E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 SUPERFAMILY SSF49493 120 174 1.57E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Gene3D G3DSA:1.10.287.110 1 99 8.7E-39 T 22-04-2016 IPR001623 DnaJ domain RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 PRINTS PR00625 DnaJ domain signature 7 25 4.1E-34 T 22-04-2016 IPR001623 DnaJ domain RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 PRINTS PR00625 DnaJ domain signature 42 62 4.1E-34 T 22-04-2016 IPR001623 DnaJ domain RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 PRINTS PR00625 DnaJ domain signature 62 81 4.1E-34 T 22-04-2016 IPR001623 DnaJ domain RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 PRINTS PR00625 DnaJ domain signature 25 40 4.1E-34 T 22-04-2016 IPR001623 DnaJ domain RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 PANTHER PTHR24078:SF190 1 352 1.1E-156 T 22-04-2016 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Pfam PF00684 DnaJ central domain 152 212 1.5E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Gene3D G3DSA:2.60.260.20 215 259 3.9E-19 T 22-04-2016 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Gene3D G3DSA:2.60.260.20 100 146 3.9E-19 T 22-04-2016 RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site RMET_RS14640 98498c31196a12e35308b7a4424a6aaa 379 Pfam PF01556 DnaJ C terminal domain 126 338 7.4E-42 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal RMET_RS23430 4b7fdf2caca0f3b133feb540a6174e7c 186 Pfam PF06804 NlpB/DapX lipoprotein 10 183 4.0E-27 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 SUPERFAMILY SSF54534 83 157 3.79E-22 T 22-04-2016 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 PANTHER PTHR30437 1 157 7.3E-60 T 22-04-2016 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 7.2E-55 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 PIRSF PIRSF006092 1 158 9.8E-49 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 6.7E-30 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 3.9E-26 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 Gene3D G3DSA:3.10.50.30 81 157 6.4E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.087 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 SUPERFAMILY SSF46557 3 78 1.44E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RMET_RS11005 808f947aea10d6a2a96111743e76c70b 158 Gene3D G3DSA:1.10.287.180 1 75 1.9E-32 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 Gene3D G3DSA:3.40.50.40 262 373 2.7E-34 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 PIRSF PIRSF001220 45 375 5.6E-89 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 SMART SM00870 50 369 4.2E-141 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 PRINTS PR00139 Asparaginase/glutaminase family signature 51 62 3.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 PRINTS PR00139 Asparaginase/glutaminase family signature 309 327 3.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 PRINTS PR00139 Asparaginase/glutaminase family signature 131 149 3.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 132 142 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 53 61 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 SUPERFAMILY SSF53774 50 374 1.1E-97 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 Pfam PF00710 Asparaginase, N-terminal 50 236 1.5E-54 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 Gene3D G3DSA:3.40.50.1170 48 258 1.6E-66 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 PANTHER PTHR11707:SF29 50 374 2.3E-92 T 22-04-2016 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 PIRSF PIRSF500176 47 375 5.9E-74 T 22-04-2016 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 PANTHER PTHR11707 50 374 2.3E-92 T 22-04-2016 RMET_RS07965 58c83fc4af85e27a94f16a356048284c 375 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 47 375 2.0E-122 T 22-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 PANTHER PTHR32282:SF2 1 183 0.0 T 22-04-2016 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 PANTHER PTHR32282:SF2 200 954 0.0 T 22-04-2016 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 SUPERFAMILY SSF52540 438 581 1.17E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 SUPERFAMILY SSF52540 1 204 1.17E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 951 22.304 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:3.40.50.300 832 950 6.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:3.40.50.300 616 703 6.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:3.40.50.300 2 51 6.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:3.40.50.300 490 608 6.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:3.30.1490.20 130 153 4.0E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:3.30.1490.20 210 257 4.0E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 PANTHER PTHR32282 1 183 0.0 T 22-04-2016 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 PANTHER PTHR32282 200 954 0.0 T 22-04-2016 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:1.20.1580.10 705 831 6.0E-54 T 22-04-2016 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 SUPERFAMILY SSF52540 631 924 2.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:1.20.1580.10 91 129 1.7E-49 T 22-04-2016 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:1.20.1580.10 415 489 1.7E-49 T 22-04-2016 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:1.20.1580.10 259 292 1.7E-49 T 22-04-2016 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 936 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS01590 60d6b23fc0bdfed85c987e3a2fb077a6 955 Gene3D G3DSA:1.10.8.280 295 414 1.7E-42 T 22-04-2016 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 Gene3D G3DSA:3.20.190.10 2 157 2.4E-35 T 22-04-2016 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 138 2.2E-31 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 SUPERFAMILY SSF81624 2 166 1.57E-35 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 SUPERFAMILY SSF46946 158 249 2.65E-25 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 PANTHER PTHR22993:SF15 1 296 4.2E-112 T 22-04-2016 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 Gene3D G3DSA:1.10.8.50 158 297 3.4E-47 T 22-04-2016 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 PANTHER PTHR22993 1 296 4.2E-112 T 22-04-2016 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 Pfam PF06827 Zinc finger found in FPG and IleRS 269 297 1.0E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 SMART SM01232 157 249 6.5E-43 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 296 8.2E-78 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 SMART SM00898 2 139 1.8E-50 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 SUPERFAMILY SSF57716 245 296 8.76E-18 T 22-04-2016 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 297 42.181 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RMET_RS01495 68bfa8e3b948ce0db54d22b16af9f596 297 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 157 246 7.8E-19 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 Pfam PF00654 Voltage gated chloride channel 67 409 1.7E-75 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 PANTHER PTHR11689 100 555 2.3E-58 T 22-04-2016 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 SMART SM00116 507 557 0.0028 T 22-04-2016 IPR000644 CBS domain RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 SMART SM00116 447 493 2.6 T 22-04-2016 IPR000644 CBS domain RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 SUPERFAMILY SSF81340 3 424 2.22E-83 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 PANTHER PTHR11689:SF14 100 555 2.3E-58 T 22-04-2016 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 Gene3D G3DSA:3.10.580.10 447 554 1.2E-12 T 22-04-2016 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 Gene3D G3DSA:1.10.3080.10 10 426 5.9E-66 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 Pfam PF00571 CBS domain 507 554 9.3E-5 T 22-04-2016 IPR000644 CBS domain RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 Pfam PF00571 CBS domain 448 491 7.3E-4 T 22-04-2016 IPR000644 CBS domain RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 SUPERFAMILY SSF54631 446 554 1.59E-13 T 22-04-2016 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 PRINTS PR00762 Chloride channel signature 329 349 3.1E-16 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 PRINTS PR00762 Chloride channel signature 110 129 3.1E-16 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 PRINTS PR00762 Chloride channel signature 359 375 3.1E-16 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 PRINTS PR00762 Chloride channel signature 377 396 3.1E-16 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02305 79223873361794b5b50cb4a5ae062fba 560 PRINTS PR00762 Chloride channel signature 165 184 3.1E-16 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Pfam PF00575 S1 RNA binding domain 621 692 3.9E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SMART SM00322 554 619 7.1E-14 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SUPERFAMILY SSF54211 297 490 2.38E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 322 2.5E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SUPERFAMILY SSF55666 452 550 2.24E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SUPERFAMILY SSF54211 2 146 9.62E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 PANTHER PTHR11252:SF0 3 698 0.0 T 22-04-2016 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Gene3D G3DSA:3.30.230.70 3 226 3.1E-83 T 22-04-2016 IPR027408 PNPase/RNase PH domain RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Gene3D G3DSA:3.30.230.70 317 543 2.1E-89 T 22-04-2016 IPR027408 PNPase/RNase PH domain RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SUPERFAMILY SSF55666 147 238 2.66E-29 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Gene3D G3DSA:1.10.10.400 229 316 9.8E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.915 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Pfam PF03725 3' exoribonuclease family, domain 2 149 211 1.4E-11 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Gene3D G3DSA:3.30.1370.10 553 620 4.8E-26 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SMART SM00316 622 692 1.5E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 PANTHER PTHR11252 3 698 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SUPERFAMILY SSF54791 556 642 7.96E-22 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SUPERFAMILY SSF46915 241 323 1.36E-14 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 2.0E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Pfam PF01138 3' exoribonuclease family, domain 1 18 146 3.3E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Gene3D G3DSA:2.40.50.140 621 695 6.2E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 Pfam PF00013 KH domain 559 615 2.1E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 SUPERFAMILY SSF50249 622 698 5.82E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS04640 cac5cb29e53d8d1ce644559573ba0c74 725 PIRSF PIRSF005499 3 715 1.4E-293 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RMET_RS08795 83b50019be16d0e4d6db6c33265b1959 297 PANTHER PTHR30537 1 295 8.0E-63 T 22-04-2016 RMET_RS08795 83b50019be16d0e4d6db6c33265b1959 297 Gene3D G3DSA:1.10.10.10 1 86 1.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08795 83b50019be16d0e4d6db6c33265b1959 297 Gene3D G3DSA:3.40.190.10 165 255 1.4E-19 T 22-04-2016 RMET_RS08795 83b50019be16d0e4d6db6c33265b1959 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.9E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08795 83b50019be16d0e4d6db6c33265b1959 297 SUPERFAMILY SSF46785 1 108 4.35E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08795 83b50019be16d0e4d6db6c33265b1959 297 Gene3D G3DSA:3.40.190.10 88 164 1.5E-5 T 22-04-2016 RMET_RS08795 83b50019be16d0e4d6db6c33265b1959 297 SUPERFAMILY SSF53850 89 295 6.98E-36 T 22-04-2016 RMET_RS08795 83b50019be16d0e4d6db6c33265b1959 297 Pfam PF03466 LysR substrate binding domain 88 294 5.1E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 Pfam PF02867 Ribonucleotide reductase, barrel domain 374 913 2.3E-183 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 Pfam PF03477 ATP cone domain 40 135 7.2E-16 T 22-04-2016 IPR005144 ATP-cone domain RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 PANTHER PTHR11573 156 979 0.0 T 22-04-2016 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 757 779 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 SUPERFAMILY SSF48168 161 372 4.19E-61 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 Gene3D G3DSA:3.20.70.20 768 813 4.8E-85 T 22-04-2016 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 Gene3D G3DSA:3.20.70.20 874 915 4.8E-85 T 22-04-2016 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 Gene3D G3DSA:3.20.70.20 291 495 4.8E-85 T 22-04-2016 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 Gene3D G3DSA:3.20.70.20 550 712 4.8E-85 T 22-04-2016 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 300 916 1.9E-212 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 297 370 8.6E-22 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 PRINTS PR01183 Ribonucleotide reductase large chain signature 664 686 1.3E-43 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 PRINTS PR01183 Ribonucleotide reductase large chain signature 768 795 1.3E-43 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 PRINTS PR01183 Ribonucleotide reductase large chain signature 449 468 1.3E-43 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 PRINTS PR01183 Ribonucleotide reductase large chain signature 584 595 1.3E-43 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 PRINTS PR01183 Ribonucleotide reductase large chain signature 626 649 1.3E-43 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 PRINTS PR01183 Ribonucleotide reductase large chain signature 692 715 1.3E-43 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 SUPERFAMILY SSF51998 373 817 5.8E-180 T 22-04-2016 RMET_RS15460 d4dc0558d7483ed568ae31a200f2f945 979 SUPERFAMILY SSF51998 848 916 5.8E-180 T 22-04-2016 RMET_RS11900 14f343d6495aa56ec96ccf4245de4169 175 Pfam PF11127 Protein of unknown function (DUF2892) 111 169 5.1E-11 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 RMET_RS11900 14f343d6495aa56ec96ccf4245de4169 175 SUPERFAMILY SSF52821 2 152 7.99E-31 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11900 14f343d6495aa56ec96ccf4245de4169 175 Pfam PF00581 Rhodanese-like domain 8 97 1.9E-11 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11900 14f343d6495aa56ec96ccf4245de4169 175 Gene3D G3DSA:3.40.250.10 2 102 2.4E-21 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11900 14f343d6495aa56ec96ccf4245de4169 175 SMART SM00450 6 100 3.6E-12 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS02120 39d396e7348ba715956032f86e90cfd5 224 PANTHER PTHR23029:SF1 15 212 3.3E-64 T 22-04-2016 RMET_RS02120 39d396e7348ba715956032f86e90cfd5 224 PANTHER PTHR23029 15 212 3.3E-64 T 22-04-2016 RMET_RS02120 39d396e7348ba715956032f86e90cfd5 224 Gene3D G3DSA:3.40.50.1240 13 215 2.3E-69 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RMET_RS02120 39d396e7348ba715956032f86e90cfd5 224 SMART SM00855 14 168 2.9E-26 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS02120 39d396e7348ba715956032f86e90cfd5 224 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 15 207 1.6E-69 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS02120 39d396e7348ba715956032f86e90cfd5 224 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 17 26 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RMET_RS02120 39d396e7348ba715956032f86e90cfd5 224 SUPERFAMILY SSF53254 12 213 3.01E-67 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RMET_RS05150 fe5f5e7c621aed59fe9e1db9a36020bb 184 PANTHER PTHR33221 2 155 4.8E-58 T 22-04-2016 RMET_RS05150 fe5f5e7c621aed59fe9e1db9a36020bb 184 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 2.1E-43 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RMET_RS05150 fe5f5e7c621aed59fe9e1db9a36020bb 184 SUPERFAMILY SSF46785 2 135 8.72E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05150 fe5f5e7c621aed59fe9e1db9a36020bb 184 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 137 5.4E-66 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 RMET_RS05150 fe5f5e7c621aed59fe9e1db9a36020bb 184 Pfam PF02082 Transcriptional regulator 1 83 6.0E-28 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RMET_RS05150 fe5f5e7c621aed59fe9e1db9a36020bb 184 Gene3D G3DSA:1.10.10.10 1 140 1.9E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05150 fe5f5e7c621aed59fe9e1db9a36020bb 184 PANTHER PTHR33221:SF1 2 155 4.8E-58 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PANTHER PTHR22912:SF131 1 280 5.5E-125 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 Gene3D G3DSA:3.50.50.60 52 246 8.9E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PANTHER PTHR22912 1 280 5.5E-125 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 88 106 2.9E-31 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 205 227 2.9E-31 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 49 67 2.9E-31 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 192 2.9E-31 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 Gene3D G3DSA:3.50.50.60 1 51 6.5E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 240 1.0E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 Gene3D G3DSA:3.30.390.30 247 280 3.0E-9 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 SUPERFAMILY SSF55424 255 280 1.72E-7 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 88 113 1.2E-37 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 191 1.2E-37 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 220 227 1.2E-37 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 276 1.2E-37 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 52 61 1.2E-37 T 22-04-2016 RMET_RS27970 129ba335d2ba8062054cd9aa70ba0d17 280 SUPERFAMILY SSF51905 17 250 6.79E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 PANTHER PTHR18919 7 382 1.3E-80 T 22-04-2016 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 SUPERFAMILY SSF53901 7 223 4.56E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 Gene3D G3DSA:3.40.47.10 193 218 2.4E-17 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 Gene3D G3DSA:3.40.47.10 12 117 2.4E-17 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 SUPERFAMILY SSF53901 251 369 3.14E-24 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 PANTHER PTHR18919:SF8 7 382 1.3E-80 T 22-04-2016 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 Gene3D G3DSA:3.40.47.10 240 372 1.4E-17 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 Gene3D G3DSA:3.40.47.10 138 178 1.4E-17 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 Pfam PF00108 Thiolase, N-terminal domain 24 181 3.4E-13 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 Pfam PF02803 Thiolase, C-terminal domain 260 350 8.9E-10 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RMET_RS13075 1346647501bd8642d3f0ef60a8f599b8 382 PIRSF PIRSF000429 5 379 3.8E-47 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 SUPERFAMILY SSF52009 353 472 1.14E-33 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 Gene3D G3DSA:3.20.20.60 486 793 3.6E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 Gene3D G3DSA:3.30.1490.20 9 199 5.0E-67 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 PANTHER PTHR22931 10 794 0.0 T 22-04-2016 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 SUPERFAMILY SSF51621 469 793 1.26E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 1.0E-114 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 SUPERFAMILY SSF56059 9 390 4.59E-106 T 22-04-2016 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 Gene3D G3DSA:3.50.30.10 378 479 1.1E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 793 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 3.5E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 Gene3D G3DSA:3.30.470.20 201 360 2.2E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 793 9.2E-59 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 PIRSF PIRSF000854 5 794 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07320 01c7bb2bf54568cdcb538a899ac3d89f 794 PANTHER PTHR22931:SF7 10 794 0.0 T 22-04-2016 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 PIRSF PIRSF015626 13 281 4.9E-79 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 Pfam PF02634 FdhD/NarQ family 41 278 6.2E-73 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 Gene3D G3DSA:3.40.140.10 142 279 1.5E-45 T 22-04-2016 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 PANTHER PTHR30592:SF1 23 280 3.8E-105 T 22-04-2016 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 SUPERFAMILY SSF53927 20 278 6.32E-78 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 PANTHER PTHR30592 23 280 3.8E-105 T 22-04-2016 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 279 7.5E-68 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 Gene3D G3DSA:3.10.20.10 43 129 1.1E-29 T 22-04-2016 RMET_RS02810 53f5dcdf229cdef6ae2d234a768b1d29 281 Hamap MF_00187 Protein FdhD [fdhD]. 17 279 36.174 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 SMART SM01209 114 293 0.0041 T 22-04-2016 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 PANTHER PTHR18866 1 673 0.0 T 22-04-2016 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 SUPERFAMILY SSF51246 331 458 3.98E-38 T 22-04-2016 IPR011054 Rudiment single hybrid motif RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 Pfam PF02785 Biotin carboxylase C-terminal domain 336 455 2.0E-37 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.6E-77 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 PANTHER PTHR18866:SF102 1 673 0.0 T 22-04-2016 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 Gene3D G3DSA:3.40.50.20 1 128 4.1E-53 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 Gene3D G3DSA:3.30.470.20 204 459 5.0E-105 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 SUPERFAMILY SSF56059 83 348 3.01E-66 T 22-04-2016 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 SUPERFAMILY SSF51230 593 671 2.49E-20 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 Pfam PF00364 Biotin-requiring enzyme 606 670 3.1E-17 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 Gene3D G3DSA:2.40.50.100 602 672 1.3E-23 T 22-04-2016 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.6E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 SUPERFAMILY SSF52440 1 113 1.22E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 SMART SM00878 336 454 1.1E-59 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 Gene3D G3DSA:3.30.1490.20 129 202 8.0E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS03075 639b202b418f5c024dd54cdd46c757af 679 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 629 646 - T 22-04-2016 IPR001882 Biotin-binding site RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PANTHER PTHR22912 26 342 4.4E-93 T 22-04-2016 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 Gene3D G3DSA:3.50.50.60 27 147 3.3E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 Gene3D G3DSA:3.50.50.60 270 350 3.3E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 SUPERFAMILY SSF51905 150 270 6.35E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 Gene3D G3DSA:3.50.50.60 149 267 1.8E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 9.5E-15 T 22-04-2016 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 9.5E-15 T 22-04-2016 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 9.5E-15 T 22-04-2016 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 29 48 9.5E-15 T 22-04-2016 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 SUPERFAMILY SSF51905 27 185 4.37E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 SUPERFAMILY SSF51905 265 338 4.37E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 85 95 3.5E-13 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 28 50 3.5E-13 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 196 3.5E-13 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 133 141 3.5E-13 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 PANTHER PTHR22912:SF158 26 342 4.4E-93 T 22-04-2016 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 Hamap MF_01685 Ferredoxin--NADP reductase. 26 352 41.131 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RMET_RS12300 adc0da9dc1ed44481a6095d48b2f922a 367 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 29 316 4.0E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 PANTHER PTHR11615:SF127 4 694 3.0E-194 T 22-04-2016 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 Gene3D G3DSA:2.20.25.90 2 62 3.1E-18 T 22-04-2016 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 58 1.6E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 Gene3D G3DSA:2.40.40.20 552 696 3.0E-43 T 22-04-2016 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 SUPERFAMILY SSF53706 4 579 2.49E-165 T 22-04-2016 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 Gene3D G3DSA:3.40.50.740 63 139 1.1E-54 T 22-04-2016 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 Gene3D G3DSA:3.40.50.740 327 545 1.1E-54 T 22-04-2016 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 423 440 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 SMART SM00926 3 58 1.1E-18 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 SUPERFAMILY SSF50692 539 693 1.08E-37 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RMET_RS15780 44d7668b59e6058bd59019677b365936 701 Gene3D G3DSA:3.40.228.10 149 326 9.8E-56 T 22-04-2016 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 Pfam PF00384 Molybdopterin oxidoreductase 61 478 1.7E-49 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 PANTHER PTHR11615 4 694 3.0E-194 T 22-04-2016 RMET_RS15780 44d7668b59e6058bd59019677b365936 701 Pfam PF01568 Molydopterin dinucleotide binding domain 578 687 3.7E-22 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 SMART SM00345 17 76 2.2E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 Pfam PF00155 Aminotransferase class I and II 114 454 7.8E-35 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 Gene3D G3DSA:3.40.640.10 140 361 6.7E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 SUPERFAMILY SSF53383 106 461 1.5E-82 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 9.6E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 2.9E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 2.9E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 Gene3D G3DSA:3.90.1150.10 366 452 2.2E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 PANTHER PTHR11751 90 461 1.5E-111 T 22-04-2016 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 PANTHER PTHR11751:SF386 90 461 1.5E-111 T 22-04-2016 RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 SUPERFAMILY SSF46785 5 80 5.25E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01060 0da8b3d73bf28c4ad7c97297984b38f3 466 Gene3D G3DSA:1.10.10.10 5 77 3.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04845 010d3e34fa18ebecb8aa1e3810063689 230 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 230 31.237 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RMET_RS04845 010d3e34fa18ebecb8aa1e3810063689 230 PIRSF PIRSF009467 3 230 7.8E-65 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RMET_RS04845 010d3e34fa18ebecb8aa1e3810063689 230 PANTHER PTHR33620 4 230 4.3E-33 T 22-04-2016 RMET_RS04845 010d3e34fa18ebecb8aa1e3810063689 230 Pfam PF01730 UreF 38 184 3.8E-46 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RMET_RS21765 47fd237b8e432f6f486c530d3576762b 262 ProSitePatterns PS00104 EPSP synthase signature 1. 188 202 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS21765 47fd237b8e432f6f486c530d3576762b 262 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 111 255 5.0E-46 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RMET_RS21765 47fd237b8e432f6f486c530d3576762b 262 SUPERFAMILY SSF55205 108 254 7.36E-42 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RMET_RS21765 47fd237b8e432f6f486c530d3576762b 262 PANTHER PTHR21090:SF21 99 252 1.1E-58 T 22-04-2016 RMET_RS21765 47fd237b8e432f6f486c530d3576762b 262 Gene3D G3DSA:3.65.10.10 123 255 2.6E-43 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RMET_RS21765 47fd237b8e432f6f486c530d3576762b 262 PANTHER PTHR21090 99 252 1.1E-58 T 22-04-2016 RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 Hamap MF_00900 GTPase HflX [hflX]. 30 395 45.589 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 PANTHER PTHR10229 10 364 2.9E-149 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 Pfam PF01926 50S ribosome-binding GTPase 204 322 1.6E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 Pfam PF13167 GTP-binding GTPase N-terminal 28 114 2.0E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 Pfam PF16360 GTP-binding GTPase Middle Region 117 196 1.1E-25 T 22-04-2016 IPR032305 GTP-binding protein, middle domain RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 PIRSF PIRSF006809 4 386 1.2E-139 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 PANTHER PTHR10229:SF0 10 364 2.9E-149 T 22-04-2016 RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 SUPERFAMILY SSF52540 202 368 1.14E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 1.7E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 1.7E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 Gene3D G3DSA:3.40.50.300 201 367 1.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10515 bdde1b5c75e6732e1b97d697b3d894e3 411 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 365 7.1E-145 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 647 1.3E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 SUPERFAMILY SSF52540 169 422 2.96E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 SMART SM01086 654 744 6.4E-32 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Gene3D G3DSA:1.10.8.60 352 433 5.7E-30 T 22-04-2016 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Gene3D G3DSA:1.10.1780.10 1 143 5.8E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.8E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 SUPERFAMILY SSF52540 438 743 1.04E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 SMART SM00382 207 352 3.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 SMART SM00382 488 664 3.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Gene3D G3DSA:3.40.50.300 170 350 2.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 1.3E-21 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 325 1.4E-11 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 SUPERFAMILY SSF81923 1 143 2.22E-57 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Gene3D G3DSA:3.40.50.300 443 665 1.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 Gene3D G3DSA:1.10.8.60 666 747 2.8E-28 T 22-04-2016 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 PANTHER PTHR11638 1 763 0.0 T 22-04-2016 RMET_RS14495 853706dbf80a4c8385a0e9b99d1bbb0b 765 PANTHER PTHR11638:SF111 1 763 0.0 T 22-04-2016 RMET_RS07950 090fa557511f8cf82faf0d74c534908e 235 Pfam PF03475 3-alpha domain 180 222 7.8E-14 T 22-04-2016 IPR005163 3-alpha domain RMET_RS07950 090fa557511f8cf82faf0d74c534908e 235 PANTHER PTHR30212 25 234 4.4E-83 T 22-04-2016 RMET_RS07950 090fa557511f8cf82faf0d74c534908e 235 Pfam PF03473 MOSC domain 52 170 1.2E-28 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RMET_RS07950 090fa557511f8cf82faf0d74c534908e 235 SUPERFAMILY SSF50800 6 234 3.09E-77 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RMET_RS07950 090fa557511f8cf82faf0d74c534908e 235 PANTHER PTHR30212:SF2 25 234 4.4E-83 T 22-04-2016 RMET_RS07950 090fa557511f8cf82faf0d74c534908e 235 Gene3D G3DSA:2.40.33.20 7 234 7.9E-91 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RMET_RS15260 1488d2f35a943d48017d1f1a937e04e4 399 Gene3D G3DSA:1.10.150.130 99 193 4.2E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS15260 1488d2f35a943d48017d1f1a937e04e4 399 Gene3D G3DSA:1.10.443.10 205 378 7.5E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS15260 1488d2f35a943d48017d1f1a937e04e4 399 PANTHER PTHR30629 2 378 2.4E-32 T 22-04-2016 RMET_RS15260 1488d2f35a943d48017d1f1a937e04e4 399 SUPERFAMILY SSF56349 98 378 3.53E-52 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS15260 1488d2f35a943d48017d1f1a937e04e4 399 Pfam PF00589 Phage integrase family 232 370 5.8E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS15260 1488d2f35a943d48017d1f1a937e04e4 399 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 154 1.1E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS15260 1488d2f35a943d48017d1f1a937e04e4 399 Pfam PF13356 Domain of unknown function (DUF4102) 6 93 4.4E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RMET_RS15260 1488d2f35a943d48017d1f1a937e04e4 399 PANTHER PTHR30629:SF2 2 378 2.4E-32 T 22-04-2016 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 Gene3D G3DSA:3.40.50.2300 4 141 8.3E-34 T 22-04-2016 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 PANTHER PTHR26402:SF613 6 206 1.6E-55 T 22-04-2016 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 Gene3D G3DSA:1.10.10.10 142 201 2.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 SUPERFAMILY SSF52172 6 152 1.71E-30 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 SMART SM00448 6 115 1.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 SMART SM00421 139 196 1.1E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 SUPERFAMILY SSF46894 129 201 8.5E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 Pfam PF00072 Response regulator receiver domain 8 115 5.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 PANTHER PTHR26402 6 206 1.6E-55 T 22-04-2016 RMET_RS08510 7ca612d09a01ad1f74ae7032ed1ecd12 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 2.4E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS06495 4534c3888df4b5fd75108250633af190 76 PRINTS PR00163 Rubredoxin signature 55 71 3.2E-9 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RMET_RS06495 4534c3888df4b5fd75108250633af190 76 PRINTS PR00163 Rubredoxin signature 25 41 3.2E-9 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RMET_RS06495 4534c3888df4b5fd75108250633af190 76 ProSitePatterns PS00202 Rubredoxin signature. 55 65 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RMET_RS06495 4534c3888df4b5fd75108250633af190 76 Pfam PF00301 Rubredoxin 26 71 7.3E-21 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RMET_RS06495 4534c3888df4b5fd75108250633af190 76 SUPERFAMILY SSF57802 25 75 5.22E-19 T 22-04-2016 RMET_RS06495 4534c3888df4b5fd75108250633af190 76 Gene3D G3DSA:2.20.28.10 26 71 2.1E-20 T 22-04-2016 IPR004039 Rubredoxin-type fold RMET_RS08025 a6869402eefe8561c9d8320e9325f62d 194 Pfam PF13590 Domain of unknown function (DUF4136) 31 189 5.1E-34 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 Gene3D G3DSA:2.60.40.420 109 272 2.8E-41 T 22-04-2016 IPR008972 Cupredoxin RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 11 232 4.1E-114 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 SUPERFAMILY SSF81464 12 111 1.8E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 Pfam PF06481 COX Aromatic Rich Motif 232 276 4.2E-16 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 PANTHER PTHR22888 12 260 5.9E-138 T 22-04-2016 RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 PANTHER PTHR22888:SF13 12 260 5.9E-138 T 22-04-2016 RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 SUPERFAMILY SSF49503 113 274 7.3E-50 T 22-04-2016 IPR008972 Cupredoxin RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 PIRSF PIRSF000292 2 288 2.8E-129 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 Gene3D G3DSA:1.10.287.90 23 106 1.2E-35 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RMET_RS04770 00a9296442a7648fe1812012bc442bcb 317 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 142 213 4.6E-6 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 SUPERFAMILY SSF51569 1 292 2.93E-96 T 22-04-2016 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 PANTHER PTHR10277:SF9 1 510 5.2E-240 T 22-04-2016 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 Gene3D G3DSA:3.20.20.70 1 347 3.3E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 501 2.0E-36 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 511 42.446 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 SMART SM00917 371 502 2.3E-42 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 499 1.7E-214 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 PANTHER PTHR10277 1 510 5.2E-240 T 22-04-2016 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 SUPERFAMILY SSF110921 392 501 8.76E-28 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RMET_RS04620 ad504fdfbf203f942f5bfc15e9b05bb2 513 Pfam PF00682 HMGL-like 5 274 2.3E-98 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RMET_RS05650 55249a2dd871a8be7b441b553d531fdf 303 PANTHER PTHR30085 6 297 7.8E-96 T 22-04-2016 RMET_RS05650 55249a2dd871a8be7b441b553d531fdf 303 Gene3D G3DSA:3.40.190.10 42 128 1.2E-27 T 22-04-2016 RMET_RS05650 55249a2dd871a8be7b441b553d531fdf 303 Gene3D G3DSA:3.40.190.10 237 276 1.2E-27 T 22-04-2016 RMET_RS05650 55249a2dd871a8be7b441b553d531fdf 303 Gene3D G3DSA:3.40.190.10 129 236 2.9E-23 T 22-04-2016 RMET_RS05650 55249a2dd871a8be7b441b553d531fdf 303 SMART SM00062 45 276 1.6E-59 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS05650 55249a2dd871a8be7b441b553d531fdf 303 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 274 2.7E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS05650 55249a2dd871a8be7b441b553d531fdf 303 SUPERFAMILY SSF53850 11 276 1.03E-60 T 22-04-2016 RMET_RS05650 55249a2dd871a8be7b441b553d531fdf 303 PANTHER PTHR30085:SF2 6 297 7.8E-96 T 22-04-2016 RMET_RS08515 75de204d39cb828c5163b590b81c4772 124 SUPERFAMILY SSF52172 9 122 5.27E-30 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS08515 75de204d39cb828c5163b590b81c4772 124 PANTHER PTHR26402 9 122 4.0E-31 T 22-04-2016 RMET_RS08515 75de204d39cb828c5163b590b81c4772 124 Pfam PF00072 Response regulator receiver domain 9 118 1.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08515 75de204d39cb828c5163b590b81c4772 124 Gene3D G3DSA:3.40.50.2300 9 122 2.1E-30 T 22-04-2016 RMET_RS08515 75de204d39cb828c5163b590b81c4772 124 SMART SM00448 6 118 5.8E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS01600 c77e7e88bf2d1b248d0b67b284d67645 181 Pfam PF00436 Single-strand binding protein family 4 108 9.3E-44 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RMET_RS01600 c77e7e88bf2d1b248d0b67b284d67645 181 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 181 1.1E-56 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RMET_RS01600 c77e7e88bf2d1b248d0b67b284d67645 181 SUPERFAMILY SSF50249 3 181 6.51E-63 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS01600 c77e7e88bf2d1b248d0b67b284d67645 181 PANTHER PTHR10302 3 181 7.9E-52 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RMET_RS01600 c77e7e88bf2d1b248d0b67b284d67645 181 Gene3D G3DSA:2.40.50.140 150 181 3.4E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS01600 c77e7e88bf2d1b248d0b67b284d67645 181 Gene3D G3DSA:2.40.50.140 1 111 3.4E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS01600 c77e7e88bf2d1b248d0b67b284d67645 181 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 39.273 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RMET_RS08215 44c98d7a82bc754bed637893d21c2549 261 SUPERFAMILY SSF51621 6 259 9.11E-84 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS08215 44c98d7a82bc754bed637893d21c2549 261 Gene3D G3DSA:3.20.20.60 11 259 1.2E-74 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS08215 44c98d7a82bc754bed637893d21c2549 261 PANTHER PTHR30502 12 259 1.2E-123 T 22-04-2016 RMET_RS08215 44c98d7a82bc754bed637893d21c2549 261 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 13 260 7.8E-143 T 22-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 RMET_RS08215 44c98d7a82bc754bed637893d21c2549 261 PANTHER PTHR30502:SF4 12 259 1.2E-123 T 22-04-2016 RMET_RS08215 44c98d7a82bc754bed637893d21c2549 261 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 26 250 6.6E-60 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 PANTHER PTHR19370 27 339 2.3E-49 T 22-04-2016 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 Gene3D G3DSA:2.40.30.10 105 188 7.9E-24 T 22-04-2016 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 2.2E-18 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 2.2E-18 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 2.2E-18 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 306 314 2.2E-18 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 193 202 2.2E-18 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 SUPERFAMILY SSF54292 5 90 4.33E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 Gene3D G3DSA:3.40.50.80 189 323 1.0E-29 T 22-04-2016 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 83 4.7E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 Gene3D G3DSA:3.10.20.30 3 94 3.3E-20 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 SUPERFAMILY SSF52343 203 339 2.1E-29 T 22-04-2016 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 SUPERFAMILY SSF63380 107 199 1.79E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 Pfam PF00175 Oxidoreductase NAD-binding domain 211 320 1.0E-12 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS06615 d415008a4d05fc2770469fd6aceda74f 340 Pfam PF00970 Oxidoreductase FAD-binding domain 108 197 8.8E-18 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 Pfam PF13401 AAA domain 35 140 3.9E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 SUPERFAMILY SSF52540 36 235 1.71E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 Pfam PF00196 Bacterial regulatory proteins, luxR family 851 906 2.9E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 882 1.2E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 852 866 1.2E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 882 894 1.2E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 Gene3D G3DSA:1.10.10.10 843 908 2.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 SMART SM00421 849 906 5.5E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 Gene3D G3DSA:3.40.50.300 117 170 7.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 Gene3D G3DSA:3.40.50.300 36 80 7.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 SUPERFAMILY SSF46894 847 910 1.8E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS12655 53b259a530d464f3a1d6beb7d3e85c8f 914 Gene3D G3DSA:1.25.40.10 455 795 1.4E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 Gene3D G3DSA:1.10.540.10 8 120 2.3E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 118 3.1E-34 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 4.5E-40 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 Gene3D G3DSA:2.40.110.10 123 220 5.0E-40 T 22-04-2016 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 SUPERFAMILY SSF47203 228 378 1.43E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 7.6E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 PANTHER PTHR10909:SF190 4 378 9.3E-186 T 22-04-2016 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 PANTHER PTHR10909 4 378 9.3E-186 T 22-04-2016 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 Gene3D G3DSA:1.20.140.10 221 378 4.9E-54 T 22-04-2016 RMET_RS12685 c62b615999aa506f054290e7d498096a 378 SUPERFAMILY SSF56645 6 242 5.5E-85 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 Pfam PF00285 Citrate synthase, C-terminal domain 50 416 1.6E-130 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 427 1.2E-242 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 Gene3D G3DSA:1.10.580.10 56 284 7.1E-97 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PRINTS PR00143 Citrate synthase signature 245 273 4.9E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PRINTS PR00143 Citrate synthase signature 384 398 4.9E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PRINTS PR00143 Citrate synthase signature 169 182 4.9E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PRINTS PR00143 Citrate synthase signature 223 238 4.9E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PRINTS PR00143 Citrate synthase signature 300 320 4.9E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PRINTS PR00143 Citrate synthase signature 364 380 4.9E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 SUPERFAMILY SSF48256 9 433 4.06E-163 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PANTHER PTHR11739 8 433 1.3E-198 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PIRSF PIRSF001369 41 433 1.2E-161 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 Gene3D G3DSA:1.10.230.10 285 378 3.0E-41 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RMET_RS12450 79726a2fb20c46275f60d0cca0cd8313 433 PANTHER PTHR11739:SF13 8 433 1.3E-198 T 22-04-2016 RMET_RS00380 8f0eb1e0cef1996221dab50ec0b804df 285 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 35 281 7.4E-41 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RMET_RS00380 8f0eb1e0cef1996221dab50ec0b804df 285 Pfam PF03099 Biotin/lipoate A/B protein ligase family 63 167 9.3E-14 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RMET_RS00380 8f0eb1e0cef1996221dab50ec0b804df 285 Pfam PF02237 Biotin protein ligase C terminal domain 237 281 4.8E-10 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 RMET_RS00380 8f0eb1e0cef1996221dab50ec0b804df 285 SUPERFAMILY SSF55681 30 232 8.75E-45 T 22-04-2016 RMET_RS00380 8f0eb1e0cef1996221dab50ec0b804df 285 Gene3D G3DSA:3.30.930.10 31 232 1.8E-51 T 22-04-2016 RMET_RS00380 8f0eb1e0cef1996221dab50ec0b804df 285 SUPERFAMILY SSF50037 235 281 2.56E-7 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal RMET_RS00380 8f0eb1e0cef1996221dab50ec0b804df 285 Gene3D G3DSA:2.30.30.100 234 283 5.6E-15 T 22-04-2016 RMET_RS00380 8f0eb1e0cef1996221dab50ec0b804df 285 PANTHER PTHR12835 33 281 1.8E-52 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 PRINTS PR00969 Pili chaperone signature 27 36 1.0E-32 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 PRINTS PR00969 Pili chaperone signature 76 97 1.0E-32 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 PRINTS PR00969 Pili chaperone signature 171 186 1.0E-32 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 PRINTS PR00969 Pili chaperone signature 104 121 1.0E-32 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 PRINTS PR00969 Pili chaperone signature 131 146 1.0E-32 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 177 239 2.3E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 Gene3D G3DSA:2.60.40.360 26 149 7.6E-45 T 22-04-2016 IPR008962 PapD-like RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 SUPERFAMILY SSF49584 143 244 2.62E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 SUPERFAMILY SSF49354 24 149 1.87E-42 T 22-04-2016 IPR008962 PapD-like RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 149 2.0E-45 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 Gene3D G3DSA:2.60.40.1070 152 240 2.3E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 PANTHER PTHR30251:SF2 1 250 1.1E-78 T 22-04-2016 RMET_RS02905 b87f19debfed0e708f259d4a6c1d779d 256 PANTHER PTHR30251 1 250 1.1E-78 T 22-04-2016 RMET_RS00195 0c1c5f52fdee066dbe51f9d378021ed4 323 SUPERFAMILY SSF144083 259 319 1.1E-15 T 22-04-2016 RMET_RS00195 0c1c5f52fdee066dbe51f9d378021ed4 323 Pfam PF01544 CorA-like Mg2+ transporter protein 33 318 1.3E-60 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RMET_RS00195 0c1c5f52fdee066dbe51f9d378021ed4 323 SUPERFAMILY SSF143865 4 255 4.71E-67 T 22-04-2016 RMET_RS00195 0c1c5f52fdee066dbe51f9d378021ed4 323 PANTHER PTHR21535 10 323 6.2E-50 T 22-04-2016 RMET_RS00195 0c1c5f52fdee066dbe51f9d378021ed4 323 Gene3D G3DSA:3.30.460.20 4 131 9.5E-34 T 22-04-2016 RMET_RS00195 0c1c5f52fdee066dbe51f9d378021ed4 323 Gene3D G3DSA:1.20.58.340 132 245 2.8E-36 T 22-04-2016 RMET_RS00195 0c1c5f52fdee066dbe51f9d378021ed4 323 Gene3D G3DSA:1.20.58.340 248 323 7.7E-19 T 22-04-2016 RMET_RS13645 e6feacef0b51a4cdfc11ae7a312a795f 389 SUPERFAMILY SSF53756 24 377 5.14E-78 T 22-04-2016 RMET_RS13645 e6feacef0b51a4cdfc11ae7a312a795f 389 Gene3D G3DSA:3.40.50.2000 71 151 4.7E-5 T 22-04-2016 RMET_RS13645 e6feacef0b51a4cdfc11ae7a312a795f 389 Pfam PF13439 Glycosyltransferase Family 4 30 191 6.2E-27 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RMET_RS13645 e6feacef0b51a4cdfc11ae7a312a795f 389 PANTHER PTHR12526 10 377 1.2E-59 T 22-04-2016 RMET_RS13645 e6feacef0b51a4cdfc11ae7a312a795f 389 Gene3D G3DSA:3.40.50.2000 204 353 1.1E-25 T 22-04-2016 RMET_RS13645 e6feacef0b51a4cdfc11ae7a312a795f 389 Pfam PF00534 Glycosyl transferases group 1 204 354 4.1E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RMET_RS08720 e657c35b130f592b496e3cb4828a5db4 143 Gene3D G3DSA:3.40.50.620 3 140 4.4E-25 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS08720 e657c35b130f592b496e3cb4828a5db4 143 PANTHER PTHR31964:SF26 1 142 9.1E-15 T 22-04-2016 RMET_RS08720 e657c35b130f592b496e3cb4828a5db4 143 Pfam PF00582 Universal stress protein family 3 136 1.8E-21 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS08720 e657c35b130f592b496e3cb4828a5db4 143 SUPERFAMILY SSF52402 2 140 3.6E-23 T 22-04-2016 RMET_RS08720 e657c35b130f592b496e3cb4828a5db4 143 PRINTS PR01438 Universal stress protein signature 115 137 3.1E-12 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08720 e657c35b130f592b496e3cb4828a5db4 143 PRINTS PR01438 Universal stress protein signature 97 109 3.1E-12 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08720 e657c35b130f592b496e3cb4828a5db4 143 PRINTS PR01438 Universal stress protein signature 1 18 3.1E-12 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08720 e657c35b130f592b496e3cb4828a5db4 143 PANTHER PTHR31964 1 142 9.1E-15 T 22-04-2016 RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 Pfam PF01047 MarR family 34 91 3.2E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 Gene3D G3DSA:1.10.10.10 3 141 3.9E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 SMART SM00347 27 127 2.9E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 SUPERFAMILY SSF46785 5 143 2.78E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 1.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 1.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 PANTHER PTHR33164 5 151 5.0E-25 T 22-04-2016 RMET_RS08175 ba0be579375fc1f7f4c02fb31d12fba4 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RMET_RS16595 5d539f40a83587d0cd055636d5eb2a7a 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16595 5d539f40a83587d0cd055636d5eb2a7a 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 8.4E-21 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16595 5d539f40a83587d0cd055636d5eb2a7a 64 PANTHER PTHR10916 1 64 2.9E-22 T 22-04-2016 RMET_RS16595 5d539f40a83587d0cd055636d5eb2a7a 64 PANTHER PTHR10916:SF0 1 64 2.9E-22 T 22-04-2016 RMET_RS16595 5d539f40a83587d0cd055636d5eb2a7a 64 Pfam PF00831 Ribosomal L29 protein 4 60 7.7E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16595 5d539f40a83587d0cd055636d5eb2a7a 64 SUPERFAMILY SSF46561 1 61 2.75E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16595 5d539f40a83587d0cd055636d5eb2a7a 64 Gene3D G3DSA:1.10.287.310 1 60 9.6E-26 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16595 5d539f40a83587d0cd055636d5eb2a7a 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.563 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS02235 d66fc5e389ad10ac22e9560afdef9ff1 135 PANTHER PTHR10374 1 125 9.6E-60 T 22-04-2016 RMET_RS02235 d66fc5e389ad10ac22e9560afdef9ff1 135 Gene3D G3DSA:3.10.180.10 1 128 1.9E-46 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS02235 d66fc5e389ad10ac22e9560afdef9ff1 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.7E-23 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RMET_RS02235 d66fc5e389ad10ac22e9560afdef9ff1 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RMET_RS02235 d66fc5e389ad10ac22e9560afdef9ff1 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 132 9.5E-66 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RMET_RS02235 d66fc5e389ad10ac22e9560afdef9ff1 135 SUPERFAMILY SSF54593 1 127 6.44E-35 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 18 349 4.4E-142 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 PANTHER PTHR30303:SF0 15 349 9.3E-157 T 22-04-2016 RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 Gene3D G3DSA:3.90.650.10 173 326 5.3E-29 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 SUPERFAMILY SSF55326 20 166 1.43E-31 T 22-04-2016 RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 163 4.3E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 PANTHER PTHR30303 15 349 9.3E-157 T 22-04-2016 RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 326 1.9E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 PIRSF PIRSF005644 14 349 3.0E-127 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 SUPERFAMILY SSF56042 170 345 3.14E-48 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS07750 3eadaf8ad7bdeb0d9243d2dd8036468e 349 Gene3D G3DSA:3.30.1330.10 30 165 4.2E-23 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 SUPERFAMILY SSF81271 279 359 7.19E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 Gene3D G3DSA:3.10.20.30 267 363 2.2E-48 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 PANTHER PTHR23305:SF12 1 363 1.8E-204 T 22-04-2016 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 SUPERFAMILY SSF52540 3 301 2.05E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.6E-156 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 Gene3D G3DSA:3.40.50.300 201 266 3.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 Gene3D G3DSA:3.40.50.300 4 130 3.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 Gene3D G3DSA:1.10.150.300 131 200 2.4E-25 T 22-04-2016 IPR023192 TGS-like domain RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 PANTHER PTHR23305 1 363 1.8E-204 T 22-04-2016 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.821 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.6E-38 T 22-04-2016 IPR013029 Domain of unknown function DUF933 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.9E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS16010 7b0b83c40401343f2b7c99bf01253574 363 PIRSF PIRSF006641 1 363 2.6E-152 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 SUPERFAMILY SSF55811 2 162 2.03E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 PANTHER PTHR22769:SF17 1 167 5.3E-74 T 22-04-2016 RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 Gene3D G3DSA:3.90.79.10 36 167 3.6E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 Pfam PF00293 NUDIX domain 38 141 1.3E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 PANTHER PTHR22769 1 167 5.3E-74 T 22-04-2016 RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 PRINTS PR00502 NUDIX hydrolase family signature 65 79 1.8E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 PRINTS PR00502 NUDIX hydrolase family signature 79 94 1.8E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 Gene3D G3DSA:2.20.70.10 1 34 5.9E-20 T 22-04-2016 RMET_RS06140 42d27aafd906a28341bfdc55d5f4c0d2 194 Pfam PF14803 Nudix N-terminal 2 34 2.0E-18 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 SUPERFAMILY SSF46894 142 237 8.72E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 Pfam PF00072 Response regulator receiver domain 5 114 9.4E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 234 2.7E-12 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 PANTHER PTHR26402:SF316 1 239 7.9E-34 T 22-04-2016 RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 SMART SM00448 1 113 2.1E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 Gene3D G3DSA:3.40.50.2300 2 120 7.2E-19 T 22-04-2016 RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 Gene3D G3DSA:1.10.10.10 138 238 2.6E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 SUPERFAMILY SSF52172 2 121 6.4E-20 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 SMART SM00862 160 237 1.8E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS00150 cd348f3fa2d8678b13536e6ca880ea9d 255 PANTHER PTHR26402 1 239 7.9E-34 T 22-04-2016 RMET_RS06460 d60768546bc221bde973fd549c36b369 387 PANTHER PTHR30149:SF0 2 380 7.7E-202 T 22-04-2016 RMET_RS06460 d60768546bc221bde973fd549c36b369 387 Pfam PF01924 Hydrogenase formation hypA family 12 369 1.6E-155 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 RMET_RS06460 d60768546bc221bde973fd549c36b369 387 PIRSF PIRSF005622 1 374 1.5E-157 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 RMET_RS06460 d60768546bc221bde973fd549c36b369 387 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 371 4.8E-146 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 RMET_RS06460 d60768546bc221bde973fd549c36b369 387 PANTHER PTHR30149 2 380 7.7E-202 T 22-04-2016 RMET_RS18125 c44738036757e500047d2376ce073515 198 Gene3D G3DSA:1.10.357.10 62 191 3.7E-38 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS18125 c44738036757e500047d2376ce073515 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18125 c44738036757e500047d2376ce073515 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18125 c44738036757e500047d2376ce073515 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RMET_RS18125 c44738036757e500047d2376ce073515 198 SUPERFAMILY SSF48498 84 191 3.0E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS18125 c44738036757e500047d2376ce073515 198 SUPERFAMILY SSF46689 1 79 3.59E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS18125 c44738036757e500047d2376ce073515 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 59 2.5E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18125 c44738036757e500047d2376ce073515 198 PANTHER PTHR30328:SF18 6 192 1.8E-30 T 22-04-2016 RMET_RS18125 c44738036757e500047d2376ce073515 198 Gene3D G3DSA:1.10.10.60 3 61 8.2E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS18125 c44738036757e500047d2376ce073515 198 PANTHER PTHR30328 6 192 1.8E-30 T 22-04-2016 RMET_RS16565 d9043e6b612ef52eaaa0c241863d9ba4 131 Gene3D G3DSA:3.30.1370.30 2 72 1.5E-28 T 22-04-2016 RMET_RS16565 d9043e6b612ef52eaaa0c241863d9ba4 131 Gene3D G3DSA:3.30.1490.10 75 130 1.5E-27 T 22-04-2016 RMET_RS16565 d9043e6b612ef52eaaa0c241863d9ba4 131 Pfam PF00410 Ribosomal protein S8 5 130 1.9E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RMET_RS16565 d9043e6b612ef52eaaa0c241863d9ba4 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.212 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RMET_RS16565 d9043e6b612ef52eaaa0c241863d9ba4 131 PANTHER PTHR11758 1 131 3.2E-58 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RMET_RS16565 d9043e6b612ef52eaaa0c241863d9ba4 131 SUPERFAMILY SSF56047 2 130 3.4E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RMET_RS16565 d9043e6b612ef52eaaa0c241863d9ba4 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RMET_RS02075 af26586393d203604ed382ca4ae1f338 130 Gene3D G3DSA:3.30.230.10 6 130 4.8E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS02075 af26586393d203604ed382ca4ae1f338 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RMET_RS02075 af26586393d203604ed382ca4ae1f338 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.3E-46 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RMET_RS02075 af26586393d203604ed382ca4ae1f338 130 PANTHER PTHR21569 7 130 7.5E-64 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RMET_RS02075 af26586393d203604ed382ca4ae1f338 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.365 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid RMET_RS02075 af26586393d203604ed382ca4ae1f338 130 SUPERFAMILY SSF54211 6 130 4.55E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS13435 d8369a075d33f052f5ddfc39476035b2 360 SUPERFAMILY SSF74653 270 359 1.44E-17 T 22-04-2016 RMET_RS13435 d8369a075d33f052f5ddfc39476035b2 360 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 300 358 6.9E-11 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RMET_RS13435 d8369a075d33f052f5ddfc39476035b2 360 Gene3D G3DSA:3.30.1150.10 257 360 7.1E-30 T 22-04-2016 RMET_RS13435 d8369a075d33f052f5ddfc39476035b2 360 Pfam PF13103 TonB C terminal 275 356 1.3E-21 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RMET_RS13435 d8369a075d33f052f5ddfc39476035b2 360 TIGRFAM TIGR02794 tolA_full: protein TolA 34 358 1.9E-59 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 SUPERFAMILY SSF56645 6 246 7.2E-62 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 Gene3D G3DSA:1.10.540.10 8 124 2.0E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 Gene3D G3DSA:2.40.110.10 125 225 1.2E-31 T 22-04-2016 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 SUPERFAMILY SSF47203 234 385 1.59E-44 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 121 2.5E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 223 5.7E-22 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 PANTHER PTHR10909 9 385 5.9E-111 T 22-04-2016 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 Gene3D G3DSA:1.20.140.10 226 385 2.7E-51 T 22-04-2016 RMET_RS09080 3b4acdb4e2d94921931de76e06159d80 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 383 5.8E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 SUPERFAMILY SSF53271 252 483 1.84E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.9E-154 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 Gene3D G3DSA:3.60.20.10 2 259 9.9E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 Pfam PF00156 Phosphoribosyl transferase domain 281 395 1.1E-10 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 SUPERFAMILY SSF56235 2 259 3.17E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 Pfam PF13537 Glutamine amidotransferase domain 81 214 2.3E-16 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 PANTHER PTHR11907:SF0 1 480 1.2E-240 T 22-04-2016 RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 Gene3D G3DSA:3.40.50.2020 273 445 7.4E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 PANTHER PTHR11907 1 480 1.2E-240 T 22-04-2016 RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 PIRSF PIRSF000485 1 483 7.6E-155 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RMET_RS12345 32384acc667da786dfeb308064c5a0f6 510 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.324 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Hamap MF_00204 UvrABC system protein B [uvrB]. 22 681 43.453 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 SMART SM00487 28 443 3.1E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Pfam PF02151 UvrB/uvrC motif 647 681 3.9E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 24 679 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Gene3D G3DSA:4.10.860.10 641 684 6.1E-19 T 22-04-2016 IPR001943 UVR domain GO:0005515 RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Pfam PF00271 Helicase conserved C-terminal domain 453 563 1.1E-19 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Gene3D G3DSA:3.40.50.300 297 357 5.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Gene3D G3DSA:3.40.50.300 25 108 5.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Gene3D G3DSA:3.40.50.300 407 428 5.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 SUPERFAMILY SSF46600 636 682 4.58E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Pfam PF04851 Type III restriction enzyme, res subunit 35 154 6.5E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 SMART SM00490 478 564 9.4E-20 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 SUPERFAMILY SSF52540 23 433 6.79E-136 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Gene3D G3DSA:3.40.50.300 437 598 4.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 SUPERFAMILY SSF52540 56 101 3.79E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 SUPERFAMILY SSF52540 477 603 3.79E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Gene3D G3DSA:3.30.2060.10 178 251 2.2E-12 T 22-04-2016 RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 Pfam PF12344 Ultra-violet resistance protein B 570 612 1.5E-20 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain RMET_RS05125 5449793b2e8b24a4ac123ec0acde8c6e 697 PANTHER PTHR24029 18 690 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RMET_RS15345 9ea2b8046aca0c82ab2cefc8b409a6d2 180 PANTHER PTHR10681:SF125 57 168 5.4E-20 T 22-04-2016 RMET_RS15345 9ea2b8046aca0c82ab2cefc8b409a6d2 180 Pfam PF08534 Redoxin 54 169 1.5E-21 T 22-04-2016 IPR013740 Redoxin GO:0016491 RMET_RS15345 9ea2b8046aca0c82ab2cefc8b409a6d2 180 Gene3D G3DSA:3.40.30.10 13 177 3.0E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15345 9ea2b8046aca0c82ab2cefc8b409a6d2 180 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS15345 9ea2b8046aca0c82ab2cefc8b409a6d2 180 PANTHER PTHR10681 57 168 5.4E-20 T 22-04-2016 RMET_RS15345 9ea2b8046aca0c82ab2cefc8b409a6d2 180 SUPERFAMILY SSF52833 15 177 1.73E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS04920 01fa5fe8e073f859e290d6eb692641ff 261 PANTHER PTHR30283 2 257 8.8E-103 T 22-04-2016 RMET_RS04920 01fa5fe8e073f859e290d6eb692641ff 261 PANTHER PTHR30283:SF3 2 257 8.8E-103 T 22-04-2016 RMET_RS04920 01fa5fe8e073f859e290d6eb692641ff 261 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 258 36.158 T 22-04-2016 IPR005583 Peroxide stress protein YaaA RMET_RS04920 01fa5fe8e073f859e290d6eb692641ff 261 Pfam PF03883 Protein of unknown function (DUF328) 1 246 1.8E-89 T 22-04-2016 IPR005583 Peroxide stress protein YaaA RMET_RS17735 503bd3541894bbc0e737fffba883e0fd 233 PANTHER PTHR31885 57 232 7.3E-25 T 22-04-2016 RMET_RS17735 503bd3541894bbc0e737fffba883e0fd 233 Pfam PF07947 YhhN-like protein 50 227 6.9E-44 T 22-04-2016 IPR012506 YhhN-like GO:0016021 RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 PANTHER PTHR10849 4 163 6.7E-85 T 22-04-2016 RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 PANTHER PTHR10849:SF20 4 163 6.7E-85 T 22-04-2016 RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 Pfam PF12838 4Fe-4S dicluster domain 63 117 3.7E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 6.9E-46 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 Gene3D G3DSA:1.10.1060.10 18 129 5.5E-22 T 22-04-2016 RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 28.031 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 SUPERFAMILY SSF54862 37 146 5.86E-26 T 22-04-2016 RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS04705 c93e18c1a6b2707435e11917abbd5004 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS16540 b54c5b19e4d4fe7fe11bf3e7bf38df30 144 Gene3D G3DSA:3.100.10.10 32 143 7.8E-27 T 22-04-2016 RMET_RS16540 b54c5b19e4d4fe7fe11bf3e7bf38df30 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.5E-31 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P RMET_RS16540 b54c5b19e4d4fe7fe11bf3e7bf38df30 144 PANTHER PTHR12934 1 143 1.0E-65 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16540 b54c5b19e4d4fe7fe11bf3e7bf38df30 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.876 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RMET_RS16540 b54c5b19e4d4fe7fe11bf3e7bf38df30 144 SUPERFAMILY SSF52080 4 143 1.7E-46 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P RMET_RS16540 b54c5b19e4d4fe7fe11bf3e7bf38df30 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.6E-48 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16165 fdd1819a039c1cbd07d579828912145f 299 PANTHER PTHR35273 52 259 3.6E-101 T 22-04-2016 RMET_RS16165 fdd1819a039c1cbd07d579828912145f 299 PANTHER PTHR35273:SF1 52 259 3.6E-101 T 22-04-2016 RMET_RS16165 fdd1819a039c1cbd07d579828912145f 299 SUPERFAMILY SSF51445 62 296 4.21E-52 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RMET_RS16165 fdd1819a039c1cbd07d579828912145f 299 Pfam PF03537 Glycoside-hydrolase family GH114 69 292 1.1E-84 T 22-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain RMET_RS10325 322f555b74fff5bf7b2e8e1f1d06974d 266 SMART SM00852 4 177 6.7E-34 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS10325 322f555b74fff5bf7b2e8e1f1d06974d 266 Pfam PF00994 Probable molybdopterin binding domain 5 170 3.5E-26 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS10325 322f555b74fff5bf7b2e8e1f1d06974d 266 Gene3D G3DSA:3.40.980.10 3 104 8.5E-31 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS10325 322f555b74fff5bf7b2e8e1f1d06974d 266 Gene3D G3DSA:3.40.980.10 137 180 8.5E-31 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS10325 322f555b74fff5bf7b2e8e1f1d06974d 266 PANTHER PTHR13939 1 220 7.5E-32 T 22-04-2016 RMET_RS10325 322f555b74fff5bf7b2e8e1f1d06974d 266 SUPERFAMILY SSF53218 3 209 4.71E-37 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 PANTHER PTHR11647:SF70 1 423 6.1E-125 T 22-04-2016 RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 Gene3D G3DSA:2.30.40.10 2 68 5.3E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 Pfam PF01979 Amidohydrolase family 224 420 5.8E-12 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 SUPERFAMILY SSF51338 1 55 5.91E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 SUPERFAMILY SSF51338 366 422 5.91E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 423 9.9E-98 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 SUPERFAMILY SSF51556 56 364 3.12E-84 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 424 32.127 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 PANTHER PTHR11647 1 423 6.1E-125 T 22-04-2016 RMET_RS13745 87d0e4b00f8f8395652c5b73d58e9185 424 Gene3D G3DSA:3.20.20.140 69 387 3.4E-83 T 22-04-2016 RMET_RS02185 e7809aa7cb672ba21355329043818767 235 SUPERFAMILY SSF53448 2 231 1.06E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS02185 e7809aa7cb672ba21355329043818767 235 Pfam PF00483 Nucleotidyl transferase 2 130 3.9E-19 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RMET_RS02185 e7809aa7cb672ba21355329043818767 235 PANTHER PTHR22572 2 231 5.6E-37 T 22-04-2016 RMET_RS02185 e7809aa7cb672ba21355329043818767 235 Gene3D G3DSA:3.90.550.10 2 233 1.1E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS07985 2bd91f069950c0b57ec763f61074fea7 302 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 13 297 4.1E-130 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RMET_RS07985 2bd91f069950c0b57ec763f61074fea7 302 PANTHER PTHR21631 11 298 2.2E-154 T 22-04-2016 RMET_RS07985 2bd91f069950c0b57ec763f61074fea7 302 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 260 5.1E-49 T 22-04-2016 RMET_RS07985 2bd91f069950c0b57ec763f61074fea7 302 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 10 298 49.998 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RMET_RS07985 2bd91f069950c0b57ec763f61074fea7 302 Gene3D G3DSA:3.20.20.60 11 292 2.2E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS07985 2bd91f069950c0b57ec763f61074fea7 302 PANTHER PTHR21631:SF4 11 298 2.2E-154 T 22-04-2016 RMET_RS07985 2bd91f069950c0b57ec763f61074fea7 302 SUPERFAMILY SSF51621 7 296 4.49E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS07985 2bd91f069950c0b57ec763f61074fea7 302 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 1.8E-79 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.177 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 SUPERFAMILY SSF55174 2 207 7.85E-67 T 22-04-2016 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 PANTHER PTHR11831:SF4 1 207 1.9E-88 T 22-04-2016 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 2.8E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 Pfam PF01479 S4 domain 98 144 2.1E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 SMART SM01390 3 96 8.4E-48 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 PANTHER PTHR11831 1 207 1.9E-88 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 Gene3D G3DSA:3.10.290.10 100 198 3.5E-31 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 Gene3D G3DSA:1.10.1050.10 2 99 5.4E-42 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RMET_RS16510 f198009f2c2784371387eed14791a9b5 207 SMART SM00363 97 161 8.9E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 Pfam PF09312 SurA N-terminal domain 81 198 2.1E-35 T 22-04-2016 IPR015391 SurA N-terminal RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 384 404 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 Hamap MF_01183 Chaperone SurA [surA]. 20 490 32.133 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 PANTHER PTHR10657:SF16 74 489 5.7E-82 T 22-04-2016 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 SUPERFAMILY SSF54534 348 447 2.88E-31 T 22-04-2016 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 SUPERFAMILY SSF109998 81 261 1.47E-39 T 22-04-2016 IPR027304 Trigger factor/SurA domain RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 Gene3D G3DSA:3.10.50.40 348 468 4.7E-38 T 22-04-2016 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 Gene3D G3DSA:3.10.50.40 228 343 6.0E-30 T 22-04-2016 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 Pfam PF00639 PPIC-type PPIASE domain 238 331 8.4E-20 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 SUPERFAMILY SSF54534 232 335 4.64E-25 T 22-04-2016 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 Pfam PF13616 PPIC-type PPIASE domain 347 445 8.8E-27 T 22-04-2016 RMET_RS02210 6882cae2dac39fc1aa45ccbcf3249fe7 493 PANTHER PTHR10657 74 489 5.7E-82 T 22-04-2016 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 SMART SM00387 481 594 1.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 Pfam PF02743 Cache domain 53 236 1.8E-16 T 22-04-2016 IPR033479 Double Cache domain 1 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 SUPERFAMILY SSF103190 104 204 6.02E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 PANTHER PTHR24423:SF451 98 137 1.1E-76 T 22-04-2016 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 PANTHER PTHR24423:SF451 348 592 1.1E-76 T 22-04-2016 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 Gene3D G3DSA:3.30.565.10 448 594 3.5E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 Gene3D G3DSA:1.10.287.130 370 435 3.9E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 SMART SM00388 371 439 7.7E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 SUPERFAMILY SSF47384 368 436 6.08E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 PANTHER PTHR24423 98 137 1.1E-76 T 22-04-2016 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 PANTHER PTHR24423 348 592 1.1E-76 T 22-04-2016 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 SUPERFAMILY SSF55874 439 592 6.68E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 593 1.8E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 Gene3D G3DSA:3.30.450.20 102 190 2.3E-4 T 22-04-2016 RMET_RS02975 55ce53af953a63c700b1f6d1a376b392 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 372 436 5.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SUPERFAMILY SSF48452 136 332 1.23E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SMART SM00028 161 194 170.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SMART SM00028 231 264 2.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SMART SM00028 482 515 250.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SMART SM00028 298 331 100.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SMART SM00028 332 365 350.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SMART SM00028 584 617 0.78 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 Gene3D G3DSA:1.25.40.10 387 620 2.7E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 Gene3D G3DSA:1.25.40.10 137 386 1.1E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 PANTHER PTHR23083 1 21 1.5E-40 T 22-04-2016 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 PANTHER PTHR23083 123 629 1.5E-40 T 22-04-2016 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SUPERFAMILY SSF48452 295 437 4.49E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 PANTHER PTHR23083:SF195 1 21 1.5E-40 T 22-04-2016 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 PANTHER PTHR23083:SF195 123 629 1.5E-40 T 22-04-2016 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 SUPERFAMILY SSF48452 457 619 6.83E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 Pfam PF14559 Tetratricopeptide repeat 563 619 1.4E-5 T 22-04-2016 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 Pfam PF13432 Tetratricopeptide repeat 336 398 7.0E-6 T 22-04-2016 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 Pfam PF13432 Tetratricopeptide repeat 211 263 8.8E-4 T 22-04-2016 RMET_RS01490 9ab6aa3f50765ff0d699549c8b7a76fe 635 Pfam PF13432 Tetratricopeptide repeat 457 499 0.0027 T 22-04-2016 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 194 293 5.5E-12 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 SUPERFAMILY SSF48179 343 464 2.13E-17 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 Gene3D G3DSA:3.90.226.10 492 637 2.9E-21 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 191 2.8E-44 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 Gene3D G3DSA:3.40.50.720 5 194 2.1E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 PANTHER PTHR23309 4 464 2.9E-114 T 22-04-2016 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 SUPERFAMILY SSF52096 490 804 4.98E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 Gene3D G3DSA:1.10.1040.10 195 294 3.6E-15 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 SUPERFAMILY SSF48179 193 311 2.13E-19 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 SUPERFAMILY SSF51735 5 191 5.45E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 Gene3D G3DSA:1.10.1040.10 357 408 4.0E-7 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 Pfam PF00378 Enoyl-CoA hydratase/isomerase 495 635 2.2E-9 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS01955 5b0b18423a506c8a72a67329b0687e72 808 PANTHER PTHR23309:SF2 4 464 2.9E-114 T 22-04-2016 RMET_RS08220 83749207199d053b90189c4b3cc08f82 364 PANTHER PTHR11091:SF2 2 357 1.9E-137 T 22-04-2016 RMET_RS08220 83749207199d053b90189c4b3cc08f82 364 Gene3D G3DSA:3.30.1370.60 75 281 2.1E-73 T 22-04-2016 RMET_RS08220 83749207199d053b90189c4b3cc08f82 364 Gene3D G3DSA:1.10.1530.10 5 74 1.8E-17 T 22-04-2016 RMET_RS08220 83749207199d053b90189c4b3cc08f82 364 SUPERFAMILY SSF89733 5 346 1.57E-99 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS08220 83749207199d053b90189c4b3cc08f82 364 Pfam PF02615 Malate/L-lactate dehydrogenase 9 340 3.1E-104 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS08220 83749207199d053b90189c4b3cc08f82 364 PANTHER PTHR11091 2 357 1.9E-137 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 SUPERFAMILY SSF54665 20 144 6.8E-41 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Gene3D G3DSA:3.90.1170.50 22 143 1.9E-41 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS04495 d2e47663e394251e3156804df9033f25 783 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 22 777 0.0 T 22-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 164 706 6.7E-196 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Gene3D G3DSA:3.30.365.10 464 632 6.1E-56 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Gene3D G3DSA:3.30.365.10 144 190 9.9E-21 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Gene3D G3DSA:3.30.365.10 287 362 9.9E-21 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Gene3D G3DSA:3.30.365.10 363 463 3.3E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Gene3D G3DSA:3.30.365.10 633 774 3.3E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 SMART SM01008 36 143 5.2E-47 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS04495 d2e47663e394251e3156804df9033f25 783 SUPERFAMILY SSF56003 143 774 2.75E-202 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 PANTHER PTHR11908 22 780 0.0 T 22-04-2016 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 37 143 2.9E-27 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS04495 d2e47663e394251e3156804df9033f25 783 Gene3D G3DSA:3.30.365.10 191 285 5.1E-33 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS04495 d2e47663e394251e3156804df9033f25 783 PANTHER PTHR11908:SF66 22 780 0.0 T 22-04-2016 RMET_RS15330 0af0227513468b0561e820a3b9b8f789 199 SUPERFAMILY SSF53474 2 189 4.19E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS15330 0af0227513468b0561e820a3b9b8f789 199 Gene3D G3DSA:3.40.50.1820 2 188 1.4E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS15330 0af0227513468b0561e820a3b9b8f789 199 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 189 1.5E-55 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RMET_RS15330 0af0227513468b0561e820a3b9b8f789 199 PANTHER PTHR35602:SF3 1 194 6.7E-59 T 22-04-2016 RMET_RS15330 0af0227513468b0561e820a3b9b8f789 199 PANTHER PTHR35602 1 194 6.7E-59 T 22-04-2016 RMET_RS09815 00f6ab09c4789be1e83f27ee05041e81 156 SUPERFAMILY SSF82784 5 151 2.22E-44 T 22-04-2016 IPR003718 OsmC/Ohr family RMET_RS09815 00f6ab09c4789be1e83f27ee05041e81 156 Pfam PF02566 OsmC-like protein 52 146 1.0E-15 T 22-04-2016 IPR003718 OsmC/Ohr family RMET_RS09815 00f6ab09c4789be1e83f27ee05041e81 156 Gene3D G3DSA:3.30.300.20 2 152 2.5E-61 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 Gene3D G3DSA:1.10.150.240 34 102 4.0E-7 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 208 7.7E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 Gene3D G3DSA:3.40.50.1000 107 238 5.4E-41 T 22-04-2016 IPR023214 HAD-like domain RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 Gene3D G3DSA:3.40.50.1000 9 33 5.4E-41 T 22-04-2016 IPR023214 HAD-like domain RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 169 3.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 122 135 3.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 3.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 77 203 1.2E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 PANTHER PTHR18901 5 238 2.1E-43 T 22-04-2016 RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 SUPERFAMILY SSF56784 11 238 7.88E-53 T 22-04-2016 IPR023214 HAD-like domain RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 207 3.9E-31 T 22-04-2016 IPR023214 HAD-like domain RMET_RS15930 3bbbf7a1539bea2c3132914302f40173 246 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 17 238 7.8E-60 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RMET_RS17370 b479397869091c3a46185f6a58129c32 128 SUPERFAMILY SSF56276 11 121 5.49E-33 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RMET_RS17370 b479397869091c3a46185f6a58129c32 128 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 11 121 8.7E-40 T 22-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RMET_RS17370 b479397869091c3a46185f6a58129c32 128 Gene3D G3DSA:3.60.90.10 11 121 2.2E-37 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RMET_RS17370 b479397869091c3a46185f6a58129c32 128 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 9 125 25.946 T 22-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RMET_RS17370 b479397869091c3a46185f6a58129c32 128 Pfam PF02675 S-adenosylmethionine decarboxylase 15 121 1.9E-33 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 RMET_RS17370 b479397869091c3a46185f6a58129c32 128 PANTHER PTHR33866:SF2 2 121 2.5E-34 T 22-04-2016 RMET_RS17370 b479397869091c3a46185f6a58129c32 128 PANTHER PTHR33866 2 121 2.5E-34 T 22-04-2016 RMET_RS00720 21759ebba19a5dcefbdc0119cdea765c 334 Gene3D G3DSA:3.40.50.1000 40 236 2.0E-21 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00720 21759ebba19a5dcefbdc0119cdea765c 334 Pfam PF13419 Haloacid dehalogenase-like hydrolase 42 224 1.2E-11 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00720 21759ebba19a5dcefbdc0119cdea765c 334 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 41 222 4.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS00720 21759ebba19a5dcefbdc0119cdea765c 334 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 39 212 1.2E-42 T 22-04-2016 IPR010237 Pyrimidine 5-nucleotidase RMET_RS00720 21759ebba19a5dcefbdc0119cdea765c 334 SUPERFAMILY SSF56784 40 230 4.58E-29 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00720 21759ebba19a5dcefbdc0119cdea765c 334 PANTHER PTHR12725 21 208 2.4E-18 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 Gene3D G3DSA:1.10.40.30 382 445 2.3E-29 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 467 43.449 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS13805 014358beceb9a095a3562c094081259c 469 Pfam PF14698 Argininosuccinate lyase C-terminal 371 445 4.0E-24 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS13805 014358beceb9a095a3562c094081259c 469 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 1.8E-69 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 1.8E-69 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 1.8E-69 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 1.8E-69 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 1.8E-69 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 1.8E-69 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 3.3E-30 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 3.3E-30 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 3.3E-30 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS13805 014358beceb9a095a3562c094081259c 469 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 3.3E-30 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS13805 014358beceb9a095a3562c094081259c 469 PANTHER PTHR11444 12 469 1.3E-222 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS13805 014358beceb9a095a3562c094081259c 469 SUPERFAMILY SSF48557 12 468 2.51E-149 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RMET_RS13805 014358beceb9a095a3562c094081259c 469 PANTHER PTHR11444:SF3 12 469 1.3E-222 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS13805 014358beceb9a095a3562c094081259c 469 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 468 2.6E-184 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS13805 014358beceb9a095a3562c094081259c 469 Pfam PF00206 Lyase 15 308 1.8E-76 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RMET_RS13805 014358beceb9a095a3562c094081259c 469 Gene3D G3DSA:1.20.200.10 115 381 6.2E-111 T 22-04-2016 RMET_RS13805 014358beceb9a095a3562c094081259c 469 Gene3D G3DSA:1.10.275.10 11 114 4.3E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RMET_RS12920 f647e4d7aa9baeacf09f09b9a156831d 202 SUPERFAMILY SSF158710 39 184 3.66E-47 T 22-04-2016 RMET_RS12920 f647e4d7aa9baeacf09f09b9a156831d 202 PANTHER PTHR38101:SF1 6 201 1.3E-50 T 22-04-2016 RMET_RS12920 f647e4d7aa9baeacf09f09b9a156831d 202 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 21 186 21.392 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RMET_RS12920 f647e4d7aa9baeacf09f09b9a156831d 202 PANTHER PTHR38101 6 201 1.3E-50 T 22-04-2016 RMET_RS12920 f647e4d7aa9baeacf09f09b9a156831d 202 Gene3D G3DSA:1.10.60.30 118 189 2.9E-27 T 22-04-2016 IPR023153 PSPTO4464-like domain RMET_RS12920 f647e4d7aa9baeacf09f09b9a156831d 202 Gene3D G3DSA:1.10.60.30 39 110 3.1E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain RMET_RS12920 f647e4d7aa9baeacf09f09b9a156831d 202 PIRSF PIRSF016183 18 190 3.0E-62 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RMET_RS12920 f647e4d7aa9baeacf09f09b9a156831d 202 Pfam PF04751 Protein of unknown function (DUF615) 30 182 3.1E-52 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 SUPERFAMILY SSF52518 358 556 6.51E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 SUPERFAMILY SSF52467 180 340 7.88E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 524 4.4E-33 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 Gene3D G3DSA:3.40.50.970 353 536 1.6E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 Gene3D G3DSA:3.40.50.970 3 175 9.5E-46 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 Gene3D G3DSA:3.40.50.1220 183 339 7.7E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 PANTHER PTHR18968 1 570 1.7E-243 T 22-04-2016 RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 2.4E-37 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 317 2.0E-29 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 SUPERFAMILY SSF52518 3 180 3.33E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09515 903513aaaca464b1131e4ed6c524fc81 570 PANTHER PTHR18968:SF12 1 570 1.7E-243 T 22-04-2016 RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 PANTHER PTHR10010 1 233 5.9E-69 T 22-04-2016 RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 Gene3D G3DSA:1.20.58.220 5 115 4.3E-33 T 22-04-2016 RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 2.0E-70 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 PANTHER PTHR10010:SF14 1 233 5.9E-69 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 SUPERFAMILY SSF109755 8 229 7.33E-68 T 22-04-2016 RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 Pfam PF01895 PhoU domain 21 109 8.3E-21 T 22-04-2016 IPR026022 PhoU domain RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 Pfam PF01895 PhoU domain 130 210 8.1E-16 T 22-04-2016 IPR026022 PhoU domain RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 Gene3D G3DSA:1.20.58.220 128 232 2.0E-31 T 22-04-2016 RMET_RS10950 92ba13d28e3e75a61d8a67073c2ba7ec 234 PIRSF PIRSF003107 3 224 1.6E-60 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RMET_RS09690 322cf3551cdda4b318ab51389ad70ac4 316 SUPERFAMILY SSF161098 92 301 1.31E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS09690 322cf3551cdda4b318ab51389ad70ac4 316 PANTHER PTHR30465 1 315 4.6E-99 T 22-04-2016 RMET_RS09690 322cf3551cdda4b318ab51389ad70ac4 316 PANTHER PTHR30465:SF0 1 315 4.6E-99 T 22-04-2016 RMET_RS09690 322cf3551cdda4b318ab51389ad70ac4 316 Gene3D G3DSA:1.10.3720.10 90 311 8.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS09690 322cf3551cdda4b318ab51389ad70ac4 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 314 1.4E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 SUPERFAMILY SSF54747 3 72 5.63E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 Gene3D G3DSA:1.10.10.250 73 141 2.8E-30 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 8.6E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 PANTHER PTHR11661 1 142 1.9E-69 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 22-04-2016 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-28 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.105 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 5.7E-64 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 SMART SM00649 9 141 3.3E-83 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 SUPERFAMILY SSF46906 68 141 1.18E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RMET_RS16740 4463d5c0163ead011a5deeb7b76256ce 143 Gene3D G3DSA:3.30.1550.10 2 72 9.6E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 2.5E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 2.5E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 128 148 2.5E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 2.5E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 SUPERFAMILY SSF46785 13 153 3.91E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 SMART SM00347 38 138 4.8E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 PANTHER PTHR33164 13 162 3.4E-28 T 22-04-2016 RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 Gene3D G3DSA:1.10.10.10 17 151 1.8E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 Pfam PF01047 MarR family 45 103 1.9E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS10135 50bf4c4921c2533297e775f548c114d6 168 ProSitePatterns PS01117 MarR-type HTH domain signature. 77 111 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RMET_RS07160 179e8bf0ad68ad2d6ae64ff6c9f7c56e 115 Gene3D G3DSA:3.40.30.10 4 115 8.2E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS07160 179e8bf0ad68ad2d6ae64ff6c9f7c56e 115 Pfam PF03960 ArsC family 6 113 5.7E-17 T 22-04-2016 IPR006660 Arsenate reductase-like RMET_RS07160 179e8bf0ad68ad2d6ae64ff6c9f7c56e 115 PANTHER PTHR30041 1 115 3.3E-36 T 22-04-2016 RMET_RS07160 179e8bf0ad68ad2d6ae64ff6c9f7c56e 115 SUPERFAMILY SSF52833 4 114 3.05E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS07160 179e8bf0ad68ad2d6ae64ff6c9f7c56e 115 PANTHER PTHR30041:SF3 1 115 3.3E-36 T 22-04-2016 RMET_RS07160 179e8bf0ad68ad2d6ae64ff6c9f7c56e 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 112 3.4E-28 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR RMET_RS08485 08ee06c8a142d3ca44bcbd3d30be5526 407 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 253 348 6.1E-16 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RMET_RS08485 08ee06c8a142d3ca44bcbd3d30be5526 407 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 184 5.0E-27 T 22-04-2016 IPR024478 4HB MCP domain RMET_RS08485 08ee06c8a142d3ca44bcbd3d30be5526 407 Gene3D G3DSA:1.10.287.950 243 324 5.5E-8 T 22-04-2016 RMET_RS08485 08ee06c8a142d3ca44bcbd3d30be5526 407 PANTHER PTHR32089:SF63 244 355 5.1E-27 T 22-04-2016 RMET_RS08485 08ee06c8a142d3ca44bcbd3d30be5526 407 Pfam PF00672 HAMP domain 194 261 1.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS08485 08ee06c8a142d3ca44bcbd3d30be5526 407 PANTHER PTHR32089 244 355 5.1E-27 T 22-04-2016 RMET_RS08485 08ee06c8a142d3ca44bcbd3d30be5526 407 SUPERFAMILY SSF58104 246 353 2.22E-13 T 22-04-2016 RMET_RS02705 9403b05900f55f04c907c3aae2f7133b 372 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 23 335 2.2E-102 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RMET_RS02705 9403b05900f55f04c907c3aae2f7133b 372 PANTHER PTHR30160 16 319 3.1E-73 T 22-04-2016 RMET_RS02705 9403b05900f55f04c907c3aae2f7133b 372 SUPERFAMILY SSF52540 56 167 5.98E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02705 9403b05900f55f04c907c3aae2f7133b 372 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 29 325 5.5E-69 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RMET_RS02705 9403b05900f55f04c907c3aae2f7133b 372 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 337 38.04 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RMET_RS02705 9403b05900f55f04c907c3aae2f7133b 372 Gene3D G3DSA:3.40.50.300 55 147 7.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02705 9403b05900f55f04c907c3aae2f7133b 372 PANTHER PTHR30160:SF13 16 319 3.1E-73 T 22-04-2016 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 PIRSF PIRSF000098 1 435 2.0E-165 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 Gene3D G3DSA:3.30.70.260 353 423 2.6E-11 T 22-04-2016 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 Gene3D G3DSA:3.40.50.720 1 148 9.5E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 Pfam PF01842 ACT domain 354 420 2.2E-14 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 SUPERFAMILY SSF51735 1 158 2.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 PANTHER PTHR21499:SF2 4 373 1.7E-130 T 22-04-2016 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 Gene3D G3DSA:3.30.360.10 149 299 2.4E-58 T 22-04-2016 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 Pfam PF00742 Homoserine dehydrogenase 137 315 6.3E-65 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 1.0E-22 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 SUPERFAMILY SSF55347 137 302 2.81E-53 T 22-04-2016 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 SUPERFAMILY SSF55021 353 424 8.68E-12 T 22-04-2016 RMET_RS09855 c8c1b21b7e43390a0b67418113d0b046 436 PANTHER PTHR21499 4 373 1.7E-130 T 22-04-2016 RMET_RS04085 557fde9ff03c6f58017ec7266afb78be 197 Pfam PF04264 YceI-like domain 23 186 7.4E-33 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS04085 557fde9ff03c6f58017ec7266afb78be 197 PANTHER PTHR34406 2 195 8.6E-37 T 22-04-2016 RMET_RS04085 557fde9ff03c6f58017ec7266afb78be 197 SUPERFAMILY SSF101874 21 188 3.01E-42 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS04085 557fde9ff03c6f58017ec7266afb78be 197 PANTHER PTHR34406:SF1 2 195 8.6E-37 T 22-04-2016 RMET_RS04085 557fde9ff03c6f58017ec7266afb78be 197 Gene3D G3DSA:2.40.128.110 20 187 8.9E-41 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS04085 557fde9ff03c6f58017ec7266afb78be 197 SMART SM00867 22 187 7.5E-47 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 Pfam PF02934 GatB/GatE catalytic domain 5 292 9.4E-109 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 SUPERFAMILY SSF89095 300 408 8.63E-30 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 SUPERFAMILY SSF55931 4 299 9.81E-117 T 22-04-2016 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 SMART SM00845 331 483 2.6E-79 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 Gene3D G3DSA:1.10.10.410 421 483 2.5E-7 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 147 161 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 PANTHER PTHR11659 2 483 1.9E-246 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 484 37.833 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 483 7.7E-167 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 PANTHER PTHR11659:SF0 2 483 1.9E-246 T 22-04-2016 RMET_RS00245 9a11f81c500f90af4c4a5e23b05672d0 484 Pfam PF02637 GatB domain 332 483 4.4E-50 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RMET_RS06450 bfdb5b41d7f61f8f35c5480f803eeee3 100 PANTHER PTHR24559:SF185 1 93 1.1E-54 T 22-04-2016 RMET_RS06450 bfdb5b41d7f61f8f35c5480f803eeee3 100 Gene3D G3DSA:3.30.420.10 1 88 3.0E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06450 bfdb5b41d7f61f8f35c5480f803eeee3 100 Pfam PF13683 Integrase core domain 22 87 1.0E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS06450 bfdb5b41d7f61f8f35c5480f803eeee3 100 SUPERFAMILY SSF53098 1 91 3.03E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06450 bfdb5b41d7f61f8f35c5480f803eeee3 100 PANTHER PTHR24559 1 93 1.1E-54 T 22-04-2016 RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 SUPERFAMILY SSF48019 220 353 3.23E-28 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 Gene3D G3DSA:1.10.8.60 147 230 4.5E-32 T 22-04-2016 RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 PANTHER PTHR34388 2 323 4.1E-57 T 22-04-2016 RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 223 321 1.1E-8 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 325 1.8E-80 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 Gene3D G3DSA:1.20.272.20 231 355 3.8E-38 T 22-04-2016 RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 Pfam PF06144 DNA polymerase III, delta subunit 24 197 4.0E-21 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 Gene3D G3DSA:3.40.50.300 1 142 6.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14895 363af4888fdbde2b9568a75dba954f43 356 SUPERFAMILY SSF52540 11 218 2.92E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01305 9def6f5dfd11b6c3dc4e582a6ac2de0c 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 322 1.1E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS01305 9def6f5dfd11b6c3dc4e582a6ac2de0c 327 Gene3D G3DSA:3.40.190.10 162 241 5.8E-4 T 22-04-2016 RMET_RS01305 9def6f5dfd11b6c3dc4e582a6ac2de0c 327 PANTHER PTHR30349:SF32 4 320 1.9E-90 T 22-04-2016 RMET_RS01305 9def6f5dfd11b6c3dc4e582a6ac2de0c 327 SUPERFAMILY SSF53850 113 288 3.8E-12 T 22-04-2016 RMET_RS01305 9def6f5dfd11b6c3dc4e582a6ac2de0c 327 PANTHER PTHR30349 4 320 1.9E-90 T 22-04-2016 RMET_RS01305 9def6f5dfd11b6c3dc4e582a6ac2de0c 327 PIRSF PIRSF017082 2 325 6.4E-75 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS11755 8ab3dcd243ef83c48dd92ec69103bf63 304 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 140 158 1.6E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS11755 8ab3dcd243ef83c48dd92ec69103bf63 304 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 68 86 1.6E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS11755 8ab3dcd243ef83c48dd92ec69103bf63 304 SMART SM00382 64 212 3.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS11755 8ab3dcd243ef83c48dd92ec69103bf63 304 Gene3D G3DSA:3.40.50.300 28 227 1.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11755 8ab3dcd243ef83c48dd92ec69103bf63 304 SUPERFAMILY SSF52540 24 293 3.31E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11755 8ab3dcd243ef83c48dd92ec69103bf63 304 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 68 211 1.9E-24 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS11755 8ab3dcd243ef83c48dd92ec69103bf63 304 PANTHER PTHR23077:SF10 17 304 4.0E-37 T 22-04-2016 RMET_RS11755 8ab3dcd243ef83c48dd92ec69103bf63 304 PANTHER PTHR23077 17 304 4.0E-37 T 22-04-2016 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.217 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.4E-54 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 Gene3D G3DSA:1.10.8.50 1 71 4.8E-30 T 22-04-2016 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 SUPERFAMILY SSF46946 2 114 2.83E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 PANTHER PTHR10871 1 115 1.3E-64 T 22-04-2016 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 Pfam PF00416 Ribosomal protein S13/S18 3 62 4.1E-14 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 Pfam PF00416 Ribosomal protein S13/S18 63 108 9.4E-17 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 Gene3D G3DSA:4.10.910.10 73 120 3.7E-25 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal RMET_RS16520 3d388864c4331eed0ef9ae3b9ae5b9c5 121 PIRSF PIRSF002134 1 121 3.0E-42 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14945 16342b4242f36990b4f0d69fad1929f9 324 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 106 119 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RMET_RS14945 16342b4242f36990b4f0d69fad1929f9 324 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 30 318 26.275 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RMET_RS14945 16342b4242f36990b4f0d69fad1929f9 324 Pfam PF01564 Spermine/spermidine synthase 37 269 2.0E-36 T 22-04-2016 RMET_RS14945 16342b4242f36990b4f0d69fad1929f9 324 SUPERFAMILY SSF53335 26 317 4.69E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14945 16342b4242f36990b4f0d69fad1929f9 324 PANTHER PTHR11558 55 319 1.4E-60 T 22-04-2016 RMET_RS14945 16342b4242f36990b4f0d69fad1929f9 324 Gene3D G3DSA:3.40.50.150 82 320 1.5E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14945 16342b4242f36990b4f0d69fad1929f9 324 Gene3D G3DSA:2.30.140.10 31 81 3.5E-11 T 22-04-2016 RMET_RS01400 09920f27bd1bc950a6240e4c794edd22 267 PANTHER PTHR24220 6 259 7.3E-114 T 22-04-2016 RMET_RS01400 09920f27bd1bc950a6240e4c794edd22 267 SUPERFAMILY SSF52540 5 233 3.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01400 09920f27bd1bc950a6240e4c794edd22 267 SMART SM00382 33 216 3.6E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01400 09920f27bd1bc950a6240e4c794edd22 267 Pfam PF00005 ABC transporter 24 166 2.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS01400 09920f27bd1bc950a6240e4c794edd22 267 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS01400 09920f27bd1bc950a6240e4c794edd22 267 PANTHER PTHR24220:SF361 6 259 7.3E-114 T 22-04-2016 RMET_RS01400 09920f27bd1bc950a6240e4c794edd22 267 Gene3D G3DSA:3.40.50.300 2 220 4.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01400 09920f27bd1bc950a6240e4c794edd22 267 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 7.3E-102 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 RMET_RS12645 e27f1cbded9926167cd9bef0a03480eb 403 Pfam PF07690 Major Facilitator Superfamily 14 322 3.2E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS12645 e27f1cbded9926167cd9bef0a03480eb 403 PANTHER PTHR11360 4 399 5.9E-128 T 22-04-2016 RMET_RS12645 e27f1cbded9926167cd9bef0a03480eb 403 Gene3D G3DSA:1.20.1250.20 12 189 2.3E-19 T 22-04-2016 RMET_RS12645 e27f1cbded9926167cd9bef0a03480eb 403 Gene3D G3DSA:1.20.1250.20 207 390 5.7E-21 T 22-04-2016 RMET_RS12645 e27f1cbded9926167cd9bef0a03480eb 403 PANTHER PTHR11360:SF115 4 399 5.9E-128 T 22-04-2016 RMET_RS12645 e27f1cbded9926167cd9bef0a03480eb 403 SUPERFAMILY SSF103473 9 391 1.11E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS01565 a366eaa9e2fa51a907cdfa2f6af450c8 659 SUPERFAMILY SSF116726 579 655 1.7E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS01565 a366eaa9e2fa51a907cdfa2f6af450c8 659 Gene3D G3DSA:3.30.70.1450 586 655 2.5E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS01565 a366eaa9e2fa51a907cdfa2f6af450c8 659 PANTHER PTHR16254 8 541 1.1E-171 T 22-04-2016 RMET_RS01565 a366eaa9e2fa51a907cdfa2f6af450c8 659 Pfam PF00999 Sodium/hydrogen exchanger family 8 376 6.5E-68 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RMET_RS01565 a366eaa9e2fa51a907cdfa2f6af450c8 659 Pfam PF02254 TrkA-N domain 414 526 5.5E-23 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RMET_RS01565 a366eaa9e2fa51a907cdfa2f6af450c8 659 Gene3D G3DSA:3.40.50.720 408 541 3.3E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01565 a366eaa9e2fa51a907cdfa2f6af450c8 659 Pfam PF02080 TrkA-C domain 589 655 3.7E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS01565 a366eaa9e2fa51a907cdfa2f6af450c8 659 SUPERFAMILY SSF51735 410 553 1.08E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07555 c8e305e1f2af121beadacb9013096946 118 Gene3D G3DSA:3.30.190.10 17 115 6.2E-41 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07555 c8e305e1f2af121beadacb9013096946 118 PANTHER PTHR31262:SF0 17 114 1.3E-27 T 22-04-2016 RMET_RS07555 c8e305e1f2af121beadacb9013096946 118 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 19 114 1.6E-37 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07555 c8e305e1f2af121beadacb9013096946 118 SMART SM00961 18 115 3.2E-46 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07555 c8e305e1f2af121beadacb9013096946 118 SUPERFAMILY SSF55239 17 115 4.32E-40 T 22-04-2016 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07555 c8e305e1f2af121beadacb9013096946 118 PANTHER PTHR31262 17 114 1.3E-27 T 22-04-2016 RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 SMART SM00965 302 350 6.3E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 Pfam PF00263 Bacterial type II and III secretion system protein 549 703 9.0E-49 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 Pfam PF11741 AMIN domain 47 127 5.3E-7 T 22-04-2016 IPR021731 AMIN domain RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 Pfam PF07660 Secretin and TonB N terminus short domain 303 350 8.1E-7 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 463 473 2.6E-19 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 668 686 2.6E-19 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 691 705 2.6E-19 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 569 2.6E-19 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 277 704 9.7E-153 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 Pfam PF03958 Bacterial type II/III secretion system short domain 376 463 3.2E-12 T 22-04-2016 IPR005644 NolW-like RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 PANTHER PTHR30604 149 394 9.4E-108 T 22-04-2016 RMET_RS16390 5a875f9f58d2798fe2c7c8188aa1302f 710 PANTHER PTHR30604 415 709 9.4E-108 T 22-04-2016 RMET_RS14160 791268b020530a875d2f6c4f28a669e4 313 Pfam PF07859 alpha/beta hydrolase fold 99 242 1.3E-16 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RMET_RS14160 791268b020530a875d2f6c4f28a669e4 313 PANTHER PTHR23024 97 313 7.8E-25 T 22-04-2016 RMET_RS14160 791268b020530a875d2f6c4f28a669e4 313 Gene3D G3DSA:3.40.50.1820 61 295 8.0E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS14160 791268b020530a875d2f6c4f28a669e4 313 PANTHER PTHR23024:SF163 97 313 7.8E-25 T 22-04-2016 RMET_RS14160 791268b020530a875d2f6c4f28a669e4 313 SUPERFAMILY SSF53474 31 305 1.76E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 79 287 2.5E-52 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 159 171 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 PANTHER PTHR12383:SF27 234 289 4.0E-87 T 22-04-2016 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 PANTHER PTHR12383:SF27 1 203 4.0E-87 T 22-04-2016 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 Pfam PF10502 Signal peptidase, peptidase S26 248 286 9.2E-8 T 22-04-2016 IPR019533 Peptidase S26 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 SUPERFAMILY SSF51306 91 295 1.31E-70 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 Gene3D G3DSA:2.10.109.10 249 295 6.4E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 Gene3D G3DSA:2.10.109.10 89 167 6.4E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 254 267 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 PANTHER PTHR12383 234 289 4.0E-87 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 PANTHER PTHR12383 1 203 4.0E-87 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 Pfam PF00717 Peptidase S24-like 99 181 2.9E-22 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 102 109 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 109 1.7E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 157 169 1.7E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RMET_RS12140 178f6d3e51d3fc513683c1af59a8ff98 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 249 268 1.7E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 SUPERFAMILY SSF46894 110 180 2.14E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 ProSitePatterns PS00622 LuxR-type HTH domain signature. 138 165 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 Gene3D G3DSA:3.30.450.20 6 114 6.6E-13 T 22-04-2016 RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 SUPERFAMILY SSF55785 6 114 1.74E-13 T 22-04-2016 IPR000014 PAS domain RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 Gene3D G3DSA:1.10.10.10 123 181 6.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 124 138 2.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 154 2.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 166 2.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 117 4.6E-9 T 22-04-2016 IPR000014 PAS domain RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 Pfam PF13426 PAS domain 16 116 2.1E-12 T 22-04-2016 IPR000014 PAS domain RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 176 7.4E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS05795 5a16af1febe771c81b4fcd84818b7ed4 181 SMART SM00421 121 178 6.9E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS16285 9b6174bf662179135492ecb87250e53f 366 Gene3D G3DSA:3.40.640.10 44 264 3.4E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS16285 9b6174bf662179135492ecb87250e53f 366 PANTHER PTHR11751:SF398 7 361 8.1E-68 T 22-04-2016 RMET_RS16285 9b6174bf662179135492ecb87250e53f 366 SUPERFAMILY SSF53383 13 362 1.42E-76 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS16285 9b6174bf662179135492ecb87250e53f 366 Gene3D G3DSA:3.90.1150.10 265 364 2.8E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS16285 9b6174bf662179135492ecb87250e53f 366 PANTHER PTHR11751 7 361 8.1E-68 T 22-04-2016 RMET_RS16285 9b6174bf662179135492ecb87250e53f 366 Pfam PF00155 Aminotransferase class I and II 43 359 3.9E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS16285 9b6174bf662179135492ecb87250e53f 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 12 364 55.581 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RMET_RS16285 9b6174bf662179135492ecb87250e53f 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 361 4.8E-96 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RMET_RS01310 149cd3c28f3abc03bf22f82939e33199 156 Pfam PF00588 SpoU rRNA Methylase family 2 143 7.7E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RMET_RS01310 149cd3c28f3abc03bf22f82939e33199 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 32.386 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RMET_RS01310 149cd3c28f3abc03bf22f82939e33199 156 PANTHER PTHR12029:SF31 1 154 3.6E-71 T 22-04-2016 RMET_RS01310 149cd3c28f3abc03bf22f82939e33199 156 SUPERFAMILY SSF75217 1 154 8.5E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RMET_RS01310 149cd3c28f3abc03bf22f82939e33199 156 PIRSF PIRSF029256 1 156 1.3E-63 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RMET_RS01310 149cd3c28f3abc03bf22f82939e33199 156 Gene3D G3DSA:3.40.1280.10 1 155 3.6E-64 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMET_RS01310 149cd3c28f3abc03bf22f82939e33199 156 PANTHER PTHR12029 1 154 3.6E-71 T 22-04-2016 RMET_RS01310 149cd3c28f3abc03bf22f82939e33199 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 154 1.6E-58 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 PANTHER PTHR24095 10 660 3.1E-270 T 22-04-2016 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 28 658 4.9E-295 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 Gene3D G3DSA:3.30.300.30 530 639 1.6E-27 T 22-04-2016 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 ProSitePatterns PS00455 Putative AMP-binding domain signature. 267 278 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 Gene3D G3DSA:3.40.50.980 273 434 5.0E-29 T 22-04-2016 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 Gene3D G3DSA:2.30.38.10 450 529 4.7E-8 T 22-04-2016 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 660 52.052 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 Pfam PF00501 AMP-binding enzyme 91 535 2.8E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 3.0E-23 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 Gene3D G3DSA:3.40.50.980 85 272 9.8E-40 T 22-04-2016 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 SUPERFAMILY SSF56801 16 656 1.31E-173 T 22-04-2016 RMET_RS11400 ac233d33eaba0e55b415445a0565048a 660 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 625 9.4E-28 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 SUPERFAMILY SSF56601 16 289 5.26E-77 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 PANTHER PTHR21581:SF3 30 396 2.7E-98 T 22-04-2016 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 PANTHER PTHR21581 30 396 2.7E-98 T 22-04-2016 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 SUPERFAMILY SSF69189 289 381 1.65E-21 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 267 1.8E-74 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 2.5E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.5E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.5E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 Gene3D G3DSA:3.40.710.10 22 287 1.9E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 Gene3D G3DSA:2.60.410.10 289 379 3.1E-25 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 289 379 1.3E-19 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS01145 9c522af962f61be5236ad95295448cf1 397 SMART SM00936 289 379 2.9E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15425 53a45d6020f49db167a64433383b95bc 277 PRINTS PR00069 Aldo-keto reductase signature 125 142 7.0E-18 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RMET_RS15425 53a45d6020f49db167a64433383b95bc 277 PRINTS PR00069 Aldo-keto reductase signature 39 63 7.0E-18 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RMET_RS15425 53a45d6020f49db167a64433383b95bc 277 PRINTS PR00069 Aldo-keto reductase signature 95 113 7.0E-18 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RMET_RS15425 53a45d6020f49db167a64433383b95bc 277 PRINTS PR00069 Aldo-keto reductase signature 199 223 7.0E-18 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RMET_RS15425 53a45d6020f49db167a64433383b95bc 277 PANTHER PTHR11732 1 273 3.7E-116 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RMET_RS15425 53a45d6020f49db167a64433383b95bc 277 SUPERFAMILY SSF51430 4 272 2.23E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS15425 53a45d6020f49db167a64433383b95bc 277 Pfam PF00248 Aldo/keto reductase family 15 264 8.8E-55 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS15425 53a45d6020f49db167a64433383b95bc 277 Gene3D G3DSA:3.20.20.100 5 271 5.7E-81 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 Pfam PF13545 Crp-like helix-turn-helix domain 153 223 2.4E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 SMART SM00100 14 132 5.8E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 SUPERFAMILY SSF46785 150 224 2.34E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 PANTHER PTHR24567 1 222 2.0E-30 T 22-04-2016 RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 Pfam PF00027 Cyclic nucleotide-binding domain 33 119 1.8E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 Gene3D G3DSA:2.60.120.10 11 140 6.9E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 PANTHER PTHR24567:SF30 1 222 2.0E-30 T 22-04-2016 RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 Gene3D G3DSA:1.10.10.10 150 223 6.9E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01085 b04561c053e45643ba96e26fd6ea961f 225 SUPERFAMILY SSF51206 7 140 9.43E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 PANTHER PTHR11908 2 475 4.4E-125 T 22-04-2016 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 6 475 1.9E-214 T 22-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 SMART SM01092 374 475 1.6E-35 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 SUPERFAMILY SSF54292 5 90 7.64E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 PIRSF PIRSF036557 3 487 7.0E-220 T 22-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 PANTHER PTHR11908:SF66 2 475 4.4E-125 T 22-04-2016 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 72 1.3E-4 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 374 474 4.9E-31 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Pfam PF01799 [2Fe-2S] binding domain 86 162 2.1E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 204 367 6.7E-47 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Gene3D G3DSA:1.10.150.120 88 174 1.4E-35 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 SUPERFAMILY SSF56176 188 367 1.12E-50 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Gene3D G3DSA:3.30.465.10 255 367 1.2E-33 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Gene3D G3DSA:3.30.390.50 375 475 1.5E-36 T 22-04-2016 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Gene3D G3DSA:3.10.20.30 2 87 4.3E-27 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 SUPERFAMILY SSF55447 371 477 1.96E-34 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 Gene3D G3DSA:3.30.43.10 205 254 6.1E-22 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS04500 f52ed342963e2ce6f358b8e408189f4f 498 SUPERFAMILY SSF47741 98 212 4.06E-32 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 Gene3D G3DSA:3.40.50.300 2 251 2.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 SMART SM00382 30 231 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 PANTHER PTHR24220 128 255 1.3E-122 T 22-04-2016 RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 PANTHER PTHR24220 7 112 1.3E-122 T 22-04-2016 RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 SUPERFAMILY SSF52540 5 253 9.24E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 PANTHER PTHR24220:SF358 128 255 1.3E-122 T 22-04-2016 RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 PANTHER PTHR24220:SF358 7 112 1.3E-122 T 22-04-2016 RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 7.9E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS12430 3ec2d547681af269cb433d0e4150fcce 255 Pfam PF00005 ABC transporter 22 181 1.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS15035 113a76a808c4e1fbd7f9d6fa9b3e2b2d 198 Gene3D G3DSA:1.20.144.10 4 170 4.1E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RMET_RS15035 113a76a808c4e1fbd7f9d6fa9b3e2b2d 198 Pfam PF01569 PAP2 superfamily 61 166 2.0E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RMET_RS15035 113a76a808c4e1fbd7f9d6fa9b3e2b2d 198 SUPERFAMILY SSF48317 1 170 3.53E-35 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RMET_RS15035 113a76a808c4e1fbd7f9d6fa9b3e2b2d 198 PANTHER PTHR14969:SF20 2 171 5.0E-30 T 22-04-2016 RMET_RS15035 113a76a808c4e1fbd7f9d6fa9b3e2b2d 198 PANTHER PTHR14969 2 171 5.0E-30 T 22-04-2016 RMET_RS15035 113a76a808c4e1fbd7f9d6fa9b3e2b2d 198 SMART SM00014 55 165 9.3E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RMET_RS11630 9fe5575ebc5987636d756e4c0beb9dd5 94 Pfam PF11284 Protein of unknown function (DUF3085) 1 88 3.0E-30 T 22-04-2016 IPR021436 Protein of unknown function DUF3085 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Gene3D G3DSA:2.120.10.90 527 720 2.4E-30 T 22-04-2016 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 PANTHER PTHR10169:SF30 297 552 6.3E-189 T 22-04-2016 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 PANTHER PTHR10169:SF30 17 273 6.3E-189 T 22-04-2016 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 627 665 0.14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 674 719 4.5E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 573 603 0.95 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 SMART SM00434 17 489 8.2E-218 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Gene3D G3DSA:3.30.1360.40 243 358 4.7E-20 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 10 771 32.765 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 SUPERFAMILY SSF101904 530 766 3.01E-47 T 22-04-2016 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 SUPERFAMILY SSF56719 37 507 8.76E-146 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 488 2.2E-131 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 PANTHER PTHR10169 297 552 6.3E-189 T 22-04-2016 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 PANTHER PTHR10169 17 273 6.3E-189 T 22-04-2016 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 16 712 1.5E-224 T 22-04-2016 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Gene3D G3DSA:3.90.199.10 361 426 6.0E-110 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RMET_RS12630 1db55b919e5ab3d61b3c846923f09500 776 Gene3D G3DSA:3.90.199.10 37 242 6.0E-110 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RMET_RS29750 63751dd5bf2a1460b6d182dfadb2bce7 233 PANTHER PTHR23501:SF73 1 233 3.9E-71 T 22-04-2016 RMET_RS29750 63751dd5bf2a1460b6d182dfadb2bce7 233 SUPERFAMILY SSF103473 129 233 1.83E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS29750 63751dd5bf2a1460b6d182dfadb2bce7 233 SUPERFAMILY SSF103473 2 74 1.83E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS29750 63751dd5bf2a1460b6d182dfadb2bce7 233 PANTHER PTHR23501 1 233 3.9E-71 T 22-04-2016 RMET_RS29750 63751dd5bf2a1460b6d182dfadb2bce7 233 Pfam PF07690 Major Facilitator Superfamily 1 228 7.6E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS29750 63751dd5bf2a1460b6d182dfadb2bce7 233 Gene3D G3DSA:1.20.1250.20 144 233 3.2E-8 T 22-04-2016 RMET_RS29750 63751dd5bf2a1460b6d182dfadb2bce7 233 Gene3D G3DSA:1.20.1250.20 2 71 6.5E-14 T 22-04-2016 RMET_RS00980 6d0e1400ebe8bf0088d7af4493d98ace 147 Gene3D G3DSA:3.30.700.10 11 116 1.4E-13 T 22-04-2016 RMET_RS00980 6d0e1400ebe8bf0088d7af4493d98ace 147 PANTHER PTHR30093 10 67 2.6E-16 T 22-04-2016 RMET_RS00980 6d0e1400ebe8bf0088d7af4493d98ace 147 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 32 124 4.9E-21 T 22-04-2016 IPR031982 Type IV minor pilin ComP RMET_RS00980 6d0e1400ebe8bf0088d7af4493d98ace 147 PANTHER PTHR30093:SF4 10 67 2.6E-16 T 22-04-2016 RMET_RS00980 6d0e1400ebe8bf0088d7af4493d98ace 147 SUPERFAMILY SSF54523 11 131 1.41E-21 T 22-04-2016 RMET_RS00980 6d0e1400ebe8bf0088d7af4493d98ace 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS00980 6d0e1400ebe8bf0088d7af4493d98ace 147 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 30 1.8E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS00980 6d0e1400ebe8bf0088d7af4493d98ace 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 8.2E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 SUPERFAMILY SSF54106 429 470 7.19E-7 T 22-04-2016 IPR018392 LysM domain RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 SMART SM00257 352 396 0.92 T 22-04-2016 IPR018392 LysM domain RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 SMART SM00257 426 471 6.8E-6 T 22-04-2016 IPR018392 LysM domain RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 Pfam PF01464 Transglycosylase SLT domain 130 233 1.8E-25 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 SUPERFAMILY SSF53955 122 282 3.71E-42 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 Gene3D G3DSA:3.10.350.10 354 396 6.2E-6 T 22-04-2016 IPR018392 LysM domain RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 Gene3D G3DSA:1.10.530.10 119 279 1.3E-45 T 22-04-2016 RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 Pfam PF01476 LysM domain 435 469 2.8E-6 T 22-04-2016 IPR018392 LysM domain RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 Gene3D G3DSA:3.10.350.10 433 470 6.0E-11 T 22-04-2016 IPR018392 LysM domain RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 143 171 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 PANTHER PTHR21666:SF206 75 490 5.4E-110 T 22-04-2016 RMET_RS11070 bf473981cd9bc076512b6049564c84dd 570 PANTHER PTHR21666 75 490 5.4E-110 T 22-04-2016 RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 PANTHER PTHR11908:SF79 21 386 5.3E-117 T 22-04-2016 RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 PANTHER PTHR11908 21 386 5.3E-117 T 22-04-2016 RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 202 373 4.3E-23 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 Gene3D G3DSA:3.30.365.10 207 223 5.9E-4 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 Gene3D G3DSA:3.30.365.10 341 366 5.9E-4 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 SUPERFAMILY SSF54665 72 181 1.1E-24 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 SUPERFAMILY SSF56003 207 386 3.27E-45 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 SMART SM01008 100 183 1.1E-12 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 Gene3D G3DSA:3.90.1170.50 69 181 2.3E-19 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 Gene3D G3DSA:3.30.365.10 224 338 1.0E-23 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS21065 f5b8107deb4f84b9bcd78cbed3edeac2 386 Gene3D G3DSA:3.30.365.10 2 67 3.8E-12 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 Pfam PF12833 Helix-turn-helix domain 197 271 2.2E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 Gene3D G3DSA:2.60.120.10 23 104 6.5E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 SUPERFAMILY SSF51182 11 202 7.56E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 Gene3D G3DSA:1.10.10.60 168 226 1.7E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 SMART SM00342 189 271 1.7E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 SUPERFAMILY SSF46689 226 270 2.47E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 Pfam PF02311 AraC-like ligand binding domain 41 119 6.2E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 Gene3D G3DSA:1.10.10.60 227 270 1.5E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 267 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 PANTHER PTHR11019:SF138 26 270 1.3E-75 T 22-04-2016 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 1.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 1.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RMET_RS00125 cb19e569c72f8d336a6c0a0e678a82c2 272 PANTHER PTHR11019 26 270 1.3E-75 T 22-04-2016 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PRINTS PR01441 Cellulose synthase subunit C signature 1161 1182 2.7E-18 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PRINTS PR01441 Cellulose synthase subunit C signature 49 69 2.7E-18 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PRINTS PR01441 Cellulose synthase subunit C signature 189 206 2.7E-18 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PRINTS PR01441 Cellulose synthase subunit C signature 508 528 2.7E-18 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PRINTS PR01441 Cellulose synthase subunit C signature 1121 1145 2.7E-18 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PRINTS PR01441 Cellulose synthase subunit C signature 159 171 2.7E-18 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SUPERFAMILY SSF48452 475 654 7.03E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SUPERFAMILY SSF48452 293 428 3.34E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SUPERFAMILY SSF48452 44 114 3.34E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PANTHER PTHR23083 834 865 1.8E-37 T 22-04-2016 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PANTHER PTHR23083 286 541 1.8E-37 T 22-04-2016 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PANTHER PTHR23083 44 108 1.8E-37 T 22-04-2016 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 PANTHER PTHR23083 734 798 1.8E-37 T 22-04-2016 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 Pfam PF14559 Tetratricopeptide repeat 748 802 3.1E-8 T 22-04-2016 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 Pfam PF14559 Tetratricopeptide repeat 377 436 2.1E-6 T 22-04-2016 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 Pfam PF14559 Tetratricopeptide repeat 298 361 8.2E-7 T 22-04-2016 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SUPERFAMILY SSF48452 741 791 1.64E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SUPERFAMILY SSF48452 489 525 1.64E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SUPERFAMILY SSF48452 371 422 1.64E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 913 1248 4.1E-112 T 22-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 Gene3D G3DSA:1.25.40.10 586 869 6.7E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 Gene3D G3DSA:1.25.40.10 287 546 3.8E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SUPERFAMILY SSF48452 714 868 4.03E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 Gene3D G3DSA:1.25.40.10 47 145 1.4E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 Gene3D G3DSA:1.25.40.10 181 277 1.4E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SMART SM00028 769 802 0.24 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SMART SM00028 321 354 0.013 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SMART SM00028 287 320 61.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SMART SM00028 365 398 31.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SMART SM00028 475 508 97.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SMART SM00028 838 871 3.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SMART SM00028 41 74 99.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS11305 8a7e87eb9b6e6039395fc3b34120a6fc 1267 SMART SM00028 735 768 39.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS08915 cf2c56a5f689294fbb2957fb33fff6ad 198 Pfam PF13649 Methyltransferase domain 43 138 5.3E-11 T 22-04-2016 RMET_RS08915 cf2c56a5f689294fbb2957fb33fff6ad 198 Gene3D G3DSA:3.40.50.150 23 182 4.1E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS08915 cf2c56a5f689294fbb2957fb33fff6ad 198 SUPERFAMILY SSF53335 22 192 9.09E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.981 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 Gene3D G3DSA:2.40.30.20 1 93 1.9E-35 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 Gene3D G3DSA:1.20.150.20 383 510 6.4E-50 T 22-04-2016 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 Gene3D G3DSA:3.40.50.300 94 382 1.2E-116 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 2.0E-16 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.8E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 SUPERFAMILY SSF52540 96 381 8.44E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 PANTHER PTHR15184:SF3 1 496 2.1E-296 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.1E-75 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 SUPERFAMILY SSF47917 383 510 1.99E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 PIRSF PIRSF039088 1 513 2.4E-242 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 PANTHER PTHR15184 1 496 2.1E-296 T 22-04-2016 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 1.6E-251 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17570 1f72b054ebd44ffa1b41ab224453e297 513 SUPERFAMILY SSF50615 10 94 1.28E-29 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 122 2.3E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 221 4.0E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 PANTHER PTHR10909 1 397 3.2E-129 T 22-04-2016 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 PANTHER PTHR10909:SF229 1 397 3.2E-129 T 22-04-2016 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 Gene3D G3DSA:2.40.110.10 126 222 1.4E-36 T 22-04-2016 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 SUPERFAMILY SSF56645 1 244 2.23E-76 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 SUPERFAMILY SSF47203 233 397 1.64E-9 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 394 7.4E-10 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 Gene3D G3DSA:1.10.540.10 1 123 4.6E-26 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04235 cdddcf55e99a6483b55701c6f773bbf3 398 Gene3D G3DSA:1.20.140.10 223 397 2.1E-17 T 22-04-2016 RMET_RS10500 7edde1ba4ac2868944dc9c772dd0fcdd 383 Pfam PF13393 Histidyl-tRNA synthetase 11 314 3.1E-121 T 22-04-2016 RMET_RS10500 7edde1ba4ac2868944dc9c772dd0fcdd 383 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 17 365 35.759 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RMET_RS10500 7edde1ba4ac2868944dc9c772dd0fcdd 383 Gene3D G3DSA:3.30.930.10 18 314 3.5E-68 T 22-04-2016 RMET_RS10500 7edde1ba4ac2868944dc9c772dd0fcdd 383 PANTHER PTHR11476 13 317 2.0E-51 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RMET_RS10500 7edde1ba4ac2868944dc9c772dd0fcdd 383 SUPERFAMILY SSF55681 5 317 2.71E-61 T 22-04-2016 RMET_RS10500 7edde1ba4ac2868944dc9c772dd0fcdd 383 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 13 317 9.4E-89 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RMET_RS10500 7edde1ba4ac2868944dc9c772dd0fcdd 383 PANTHER PTHR11476:SF5 13 317 2.0E-51 T 22-04-2016 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 PANTHER PTHR11142 3 250 2.0E-83 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 Gene3D G3DSA:3.30.70.580 2 104 2.6E-35 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 SUPERFAMILY SSF55120 3 256 2.16E-85 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 Pfam PF01416 tRNA pseudouridine synthase 148 249 3.7E-30 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 Pfam PF01416 tRNA pseudouridine synthase 9 103 3.7E-9 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 PIRSF PIRSF001430 1 264 2.3E-72 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 243 1.2E-64 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 248 33.831 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12390 7faa16ca5bd3fb2210478ff007ab28ef 276 Gene3D G3DSA:3.30.70.660 107 247 1.5E-42 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 Gene3D G3DSA:3.40.47.10 194 276 3.6E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 Gene3D G3DSA:3.40.47.10 3 123 3.6E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 SUPERFAMILY SSF53901 271 392 1.56E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 6.5E-55 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 PANTHER PTHR18919:SF95 1 393 1.8E-233 T 22-04-2016 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 PIRSF PIRSF000429 1 393 3.4E-135 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 7.0E-110 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 PANTHER PTHR18919 1 393 1.8E-233 T 22-04-2016 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 SUPERFAMILY SSF53901 3 270 3.36E-90 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 Gene3D G3DSA:3.40.47.10 142 193 3.0E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 Gene3D G3DSA:3.40.47.10 277 392 3.0E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06840 1bba2777587e8144162b9916dc39de51 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.3E-150 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PANTHER PTHR19370 1 229 4.7E-49 T 22-04-2016 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 SUPERFAMILY SSF54292 222 334 1.07E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 254 327 1.5E-16 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 113 132 2.6E-10 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 2.6E-10 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 2.6E-10 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 91 105 2.6E-10 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 SUPERFAMILY SSF52343 94 227 9.3E-30 T 22-04-2016 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 Gene3D G3DSA:3.40.50.80 107 227 4.4E-28 T 22-04-2016 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 Gene3D G3DSA:2.40.30.10 2 104 1.6E-25 T 22-04-2016 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 SUPERFAMILY SSF63380 2 107 5.96E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 285 293 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 Pfam PF00970 Oxidoreductase FAD-binding domain 7 103 5.7E-13 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 Gene3D G3DSA:3.10.20.30 228 332 1.2E-31 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 113 132 8.3E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 197 205 8.3E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 8.3E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 137 146 8.3E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS02745 9c87e845b1d39d33e396793bb9e6c127 339 Pfam PF00175 Oxidoreductase NAD-binding domain 115 211 2.1E-12 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 98 349 2.9E-10 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 TIGRFAM TIGR00260 thrC: threonine synthase 108 443 3.5E-65 T 22-04-2016 IPR004450 Threonine synthase-like RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 Gene3D G3DSA:3.40.50.1100 123 215 5.3E-7 T 22-04-2016 RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 Pfam PF14821 Threonine synthase N terminus 2 79 2.1E-29 T 22-04-2016 IPR029144 Threonine synthase, N-terminal RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 Gene3D G3DSA:3.90.1380.10 1 82 2.2E-32 T 22-04-2016 IPR029144 Threonine synthase, N-terminal RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 PANTHER PTHR10314:SF1 53 346 2.9E-117 T 22-04-2016 RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 PANTHER PTHR10314:SF1 379 479 2.9E-117 T 22-04-2016 RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 PANTHER PTHR10314:SF1 25 36 2.9E-117 T 22-04-2016 RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 SUPERFAMILY SSF53686 1 479 3.84E-151 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 PANTHER PTHR10314 53 346 2.9E-117 T 22-04-2016 RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 PANTHER PTHR10314 379 479 2.9E-117 T 22-04-2016 RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 PANTHER PTHR10314 25 36 2.9E-117 T 22-04-2016 RMET_RS09850 1887711065a5f2d451df132a21ed0c63 481 Gene3D G3DSA:3.40.50.1100 216 452 4.4E-88 T 22-04-2016 RMET_RS10855 25e606b3d2e3e3f4446c0a5fdbbd5697 710 SMART SM00530 12 67 5.8E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS10855 25e606b3d2e3e3f4446c0a5fdbbd5697 710 Pfam PF13560 Helix-turn-helix domain 8 66 2.8E-12 T 22-04-2016 RMET_RS10855 25e606b3d2e3e3f4446c0a5fdbbd5697 710 Gene3D G3DSA:1.10.260.40 3 65 2.5E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS10855 25e606b3d2e3e3f4446c0a5fdbbd5697 710 Gene3D G3DSA:3.40.50.300 192 215 7.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10855 25e606b3d2e3e3f4446c0a5fdbbd5697 710 Gene3D G3DSA:3.40.50.300 111 159 7.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10855 25e606b3d2e3e3f4446c0a5fdbbd5697 710 SUPERFAMILY SSF52540 121 221 9.8E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10855 25e606b3d2e3e3f4446c0a5fdbbd5697 710 SUPERFAMILY SSF52540 329 408 9.8E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10855 25e606b3d2e3e3f4446c0a5fdbbd5697 710 SUPERFAMILY SSF47413 6 63 2.73E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 ProSitePatterns PS00194 Thioredoxin family active site. 161 179 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 PANTHER PTHR10438:SF244 97 196 1.3E-27 T 22-04-2016 RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 PANTHER PTHR10438:SF244 220 265 1.3E-27 T 22-04-2016 RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 Gene3D G3DSA:3.40.30.10 130 265 1.5E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 Pfam PF08534 Redoxin 136 254 8.1E-16 T 22-04-2016 IPR013740 Redoxin GO:0016491 RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 SUPERFAMILY SSF52833 106 261 8.02E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 106 8.2E-9 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 PANTHER PTHR10438 97 196 1.3E-27 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RMET_RS12010 32e48ccec0a48d53d8f54617a4a416b6 278 PANTHER PTHR10438 220 265 1.3E-27 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RMET_RS11410 34d56168a502389317e7bb5256bc4834 184 PANTHER PTHR38596:SF1 7 174 1.1E-78 T 22-04-2016 RMET_RS11410 34d56168a502389317e7bb5256bc4834 184 PANTHER PTHR38596 7 174 1.1E-78 T 22-04-2016 RMET_RS11410 34d56168a502389317e7bb5256bc4834 184 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 168 97.502 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 RMET_RS11410 34d56168a502389317e7bb5256bc4834 184 Pfam PF03350 Uncharacterized protein family, UPF0114 13 129 1.9E-40 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 RMET_RS11410 34d56168a502389317e7bb5256bc4834 184 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 9 165 1.4E-64 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 Hamap MF_00186 Glycerol kinase [glpK]. 12 505 56.983 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 PANTHER PTHR10196 2 513 3.2E-249 T 22-04-2016 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 370 390 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 SUPERFAMILY SSF53067 263 505 3.37E-85 T 22-04-2016 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 269 458 1.5E-59 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 SUPERFAMILY SSF53067 14 263 7.0E-95 T 22-04-2016 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 PANTHER PTHR10196:SF9 2 513 3.2E-249 T 22-04-2016 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 13 504 2.6E-215 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 PIRSF PIRSF000538 12 510 1.5E-177 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 Gene3D G3DSA:3.30.420.40 11 261 1.1E-100 T 22-04-2016 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 14 260 8.1E-81 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 Gene3D G3DSA:3.30.420.40 263 506 2.5E-103 T 22-04-2016 RMET_RS11235 5c1f6bf201897f74e80431a7bd538da3 513 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 144 156 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RMET_RS19980 9cb6bcfd61a1a129504f58b34d9cece1 274 Pfam PF03109 ABC1 family 109 230 1.6E-32 T 22-04-2016 IPR004147 UbiB domain RMET_RS19980 9cb6bcfd61a1a129504f58b34d9cece1 274 SUPERFAMILY SSF56112 193 258 4.42E-17 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS19980 9cb6bcfd61a1a129504f58b34d9cece1 274 SUPERFAMILY SSF56112 91 158 4.42E-17 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS19980 9cb6bcfd61a1a129504f58b34d9cece1 274 PANTHER PTHR10566 4 274 3.7E-111 T 22-04-2016 RMET_RS19980 9cb6bcfd61a1a129504f58b34d9cece1 274 PANTHER PTHR10566:SF79 4 274 3.7E-111 T 22-04-2016 RMET_RS13415 900506d1eaac2cde16f25132d830bbe5 227 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 221 54.808 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RMET_RS13415 900506d1eaac2cde16f25132d830bbe5 227 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 208 1.0E-58 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RMET_RS13415 900506d1eaac2cde16f25132d830bbe5 227 PIRSF PIRSF006293 1 227 1.3E-77 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RMET_RS13415 900506d1eaac2cde16f25132d830bbe5 227 SUPERFAMILY SSF52402 3 224 5.73E-66 T 22-04-2016 RMET_RS13415 900506d1eaac2cde16f25132d830bbe5 227 Gene3D G3DSA:3.40.50.620 2 225 6.7E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS13415 900506d1eaac2cde16f25132d830bbe5 227 PANTHER PTHR11587 3 223 2.8E-103 T 22-04-2016 RMET_RS13415 900506d1eaac2cde16f25132d830bbe5 227 PANTHER PTHR11587:SF3 3 223 2.8E-103 T 22-04-2016 RMET_RS13415 900506d1eaac2cde16f25132d830bbe5 227 Pfam PF06508 Queuosine biosynthesis protein QueC 4 215 2.0E-76 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RMET_RS05540 a81643d708406b326b09ddef3ed9c323 187 PANTHER PTHR12589 3 152 9.3E-13 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RMET_RS05540 a81643d708406b326b09ddef3ed9c323 187 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 146 2.1E-23 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RMET_RS05540 a81643d708406b326b09ddef3ed9c323 187 PANTHER PTHR12589:SF5 3 152 9.3E-13 T 22-04-2016 RMET_RS05540 a81643d708406b326b09ddef3ed9c323 187 SUPERFAMILY SSF55620 1 147 7.78E-30 T 22-04-2016 RMET_RS05540 a81643d708406b326b09ddef3ed9c323 187 Gene3D G3DSA:3.30.479.10 1 147 5.1E-28 T 22-04-2016 RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 PANTHER PTHR10799 347 425 1.7E-16 T 22-04-2016 RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 PANTHER PTHR10799 71 208 1.7E-16 T 22-04-2016 RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 PANTHER PTHR10799 470 728 1.7E-16 T 22-04-2016 RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 Gene3D G3DSA:3.40.50.300 578 705 1.4E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 SMART SM00487 69 413 2.6E-10 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 SUPERFAMILY SSF52540 69 159 3.54E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 SUPERFAMILY SSF52540 187 206 3.54E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 SUPERFAMILY SSF52540 345 411 3.54E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 Gene3D G3DSA:3.40.50.300 345 403 2.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 Gene3D G3DSA:3.40.50.300 62 187 2.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 SUPERFAMILY SSF52540 571 736 1.51E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 SUPERFAMILY SSF52540 351 393 1.51E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 PANTHER PTHR10799:SF573 347 425 1.7E-16 T 22-04-2016 RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 PANTHER PTHR10799:SF573 71 208 1.7E-16 T 22-04-2016 RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 PANTHER PTHR10799:SF573 470 728 1.7E-16 T 22-04-2016 RMET_RS11690 7d36efc7a5e9e68e8d47e573315629e1 759 Pfam PF00271 Helicase conserved C-terminal domain 585 695 2.4E-6 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 PANTHER PTHR11085 1 239 1.4E-82 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 SUPERFAMILY SSF52467 4 242 1.66E-79 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 Pfam PF02146 Sir2 family 24 195 2.9E-46 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 17 242 56.43 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 Gene3D G3DSA:3.30.1600.10 122 164 1.0E-22 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 Gene3D G3DSA:3.30.1600.10 33 73 1.0E-22 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 Gene3D G3DSA:3.40.50.1220 81 121 2.1E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 Gene3D G3DSA:3.40.50.1220 174 238 2.1E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS10460 2998d47cb66f28525e7a47f10368ab9f 244 Gene3D G3DSA:3.40.50.1220 6 32 2.1E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS05395 04c4d47d5dc2ba3ad8832f6190cda6ee 177 PANTHER PTHR10516:SF316 130 168 3.9E-17 T 22-04-2016 RMET_RS05395 04c4d47d5dc2ba3ad8832f6190cda6ee 177 PANTHER PTHR10516 130 168 3.9E-17 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RMET_RS05395 04c4d47d5dc2ba3ad8832f6190cda6ee 177 PANTHER PTHR10516 1 82 3.9E-17 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RMET_RS05395 04c4d47d5dc2ba3ad8832f6190cda6ee 177 Gene3D G3DSA:3.10.50.40 3 68 3.4E-7 T 22-04-2016 RMET_RS05395 04c4d47d5dc2ba3ad8832f6190cda6ee 177 Gene3D G3DSA:3.10.50.40 123 142 3.4E-7 T 22-04-2016 RMET_RS05395 04c4d47d5dc2ba3ad8832f6190cda6ee 177 SUPERFAMILY SSF54534 2 141 4.12E-27 T 22-04-2016 RMET_RS05395 04c4d47d5dc2ba3ad8832f6190cda6ee 177 PANTHER PTHR10516:SF316 1 82 3.9E-17 T 22-04-2016 RMET_RS21905 1b882b4ca4303f1d76b7782acdda3c44 330 SUPERFAMILY SSF89550 2 245 5.69E-5 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RMET_RS21905 1b882b4ca4303f1d76b7782acdda3c44 330 PANTHER PTHR32294:SF0 1 330 5.5E-111 T 22-04-2016 RMET_RS21905 1b882b4ca4303f1d76b7782acdda3c44 330 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 274 330 3.8E-8 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS21905 1b882b4ca4303f1d76b7782acdda3c44 330 PANTHER PTHR32294 1 330 5.5E-111 T 22-04-2016 RMET_RS21905 1b882b4ca4303f1d76b7782acdda3c44 330 Gene3D G3DSA:3.20.20.140 1 238 1.0E-12 T 22-04-2016 RMET_RS21905 1b882b4ca4303f1d76b7782acdda3c44 330 Pfam PF02811 PHP domain 1 155 1.8E-31 T 22-04-2016 IPR004013 PHP domain GO:0003824 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 PIRSF PIRSF005261 2 320 1.3E-71 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 SUPERFAMILY SSF118352 263 318 4.05E-19 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 Gene3D G3DSA:3.55.30.10 5 189 1.9E-63 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 PANTHER PTHR30111:SF1 210 325 2.1E-54 T 22-04-2016 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 PANTHER PTHR30111:SF1 8 191 2.1E-54 T 22-04-2016 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 SUPERFAMILY SSF64397 8 269 1.07E-60 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 PANTHER PTHR30111 8 191 2.1E-54 T 22-04-2016 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 Pfam PF01430 Hsp33 protein 8 310 3.8E-85 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 PANTHER PTHR30111 210 325 2.1E-54 T 22-04-2016 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 Gene3D G3DSA:3.90.1280.10 263 318 1.8E-24 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RMET_RS05320 8155aff24df1dca7272177af6272c520 334 Gene3D G3DSA:1.10.287.480 211 260 1.2E-7 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RMET_RS15585 b08444bf7b19f4345956ac2991ead5c9 252 Gene3D G3DSA:2.60.440.10 173 250 8.2E-17 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain RMET_RS15585 b08444bf7b19f4345956ac2991ead5c9 252 Pfam PF07072 Protein of unknown function (DUF1342) 16 226 2.0E-77 T 22-04-2016 IPR009777 Cell division protein ZapD RMET_RS15585 b08444bf7b19f4345956ac2991ead5c9 252 Gene3D G3DSA:1.10.3900.10 10 172 3.4E-64 T 22-04-2016 RMET_RS15585 b08444bf7b19f4345956ac2991ead5c9 252 SUPERFAMILY SSF160950 2 250 2.48E-82 T 22-04-2016 RMET_RS15585 b08444bf7b19f4345956ac2991ead5c9 252 PANTHER PTHR39455:SF1 2 251 5.2E-52 T 22-04-2016 RMET_RS15585 b08444bf7b19f4345956ac2991ead5c9 252 PANTHER PTHR39455 2 251 5.2E-52 T 22-04-2016 RMET_RS15585 b08444bf7b19f4345956ac2991ead5c9 252 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 250 32.142 T 22-04-2016 IPR009777 Cell division protein ZapD RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 Gene3D G3DSA:3.10.20.70 5 107 3.6E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 PANTHER PTHR20852:SF15 4 140 1.8E-256 T 22-04-2016 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 PANTHER PTHR20852:SF15 163 471 1.8E-256 T 22-04-2016 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 SUPERFAMILY SSF55931 104 470 1.47E-136 T 22-04-2016 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 4.3E-136 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 1.2E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 SMART SM01230 104 381 1.4E-144 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 Gene3D G3DSA:3.30.590.10 108 458 6.5E-138 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 SUPERFAMILY SSF54368 5 101 4.97E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 2.0E-199 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 PANTHER PTHR20852 4 140 1.8E-256 T 22-04-2016 RMET_RS10315 591ef76a8067888991be9dced51c7bb3 471 PANTHER PTHR20852 163 471 1.8E-256 T 22-04-2016 RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 Pfam PF13411 MerR HTH family regulatory protein 31 98 2.6E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 Gene3D G3DSA:1.10.1660.10 31 103 3.1E-18 T 22-04-2016 RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 SMART SM00422 31 99 1.6E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 PANTHER PTHR30204 23 268 2.1E-25 T 22-04-2016 RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 43 56 1.4E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 32 43 1.4E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 66 86 1.4E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 SUPERFAMILY SSF46955 31 103 6.59E-17 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS18095 3eb032565e9cbee552f5ab95fa99b263 279 PANTHER PTHR30204:SF13 23 268 2.1E-25 T 22-04-2016 RMET_RS02275 6413e58b974aec8a8709f4f603a69631 521 Pfam PF00795 Carbon-nitrogen hydrolase 265 486 2.4E-28 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS02275 6413e58b974aec8a8709f4f603a69631 521 PANTHER PTHR38686 12 521 1.0E-88 T 22-04-2016 RMET_RS02275 6413e58b974aec8a8709f4f603a69631 521 SUPERFAMILY SSF56317 239 500 2.22E-40 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS02275 6413e58b974aec8a8709f4f603a69631 521 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 20 506 22.366 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RMET_RS02275 6413e58b974aec8a8709f4f603a69631 521 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 74 468 5.2E-102 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RMET_RS02275 6413e58b974aec8a8709f4f603a69631 521 Gene3D G3DSA:3.60.110.10 238 486 3.9E-28 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS14720 173d7f455a960fa07c6c1e7c0b012439 229 PANTHER PTHR10146 4 228 4.1E-106 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RMET_RS14720 173d7f455a960fa07c6c1e7c0b012439 229 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 228 3.1E-80 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RMET_RS14720 173d7f455a960fa07c6c1e7c0b012439 229 Gene3D G3DSA:3.20.20.10 2 228 4.0E-93 T 22-04-2016 IPR029066 PLP-binding barrel RMET_RS14720 173d7f455a960fa07c6c1e7c0b012439 229 Pfam PF01168 Alanine racemase, N-terminal domain 7 228 1.8E-33 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS14720 173d7f455a960fa07c6c1e7c0b012439 229 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 78 92 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RMET_RS14720 173d7f455a960fa07c6c1e7c0b012439 229 PIRSF PIRSF004848 1 229 2.6E-74 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RMET_RS14720 173d7f455a960fa07c6c1e7c0b012439 229 SUPERFAMILY SSF51419 3 226 4.58E-82 T 22-04-2016 IPR029066 PLP-binding barrel RMET_RS04650 3934f2bec8dadb24c881aae47c4852d1 234 Pfam PF00121 Triosephosphate isomerase 1 231 4.5E-80 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS04650 3934f2bec8dadb24c881aae47c4852d1 234 SUPERFAMILY SSF51351 3 232 2.62E-82 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS04650 3934f2bec8dadb24c881aae47c4852d1 234 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 234 34.112 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS04650 3934f2bec8dadb24c881aae47c4852d1 234 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 17 226 6.2E-55 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS04650 3934f2bec8dadb24c881aae47c4852d1 234 PANTHER PTHR21139 1 234 6.6E-105 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS04650 3934f2bec8dadb24c881aae47c4852d1 234 Gene3D G3DSA:3.20.20.70 1 233 3.0E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS08130 57f0046ef0c3c2f4f059c6ccd5799d75 279 PANTHER PTHR30465 1 276 2.8E-104 T 22-04-2016 RMET_RS08130 57f0046ef0c3c2f4f059c6ccd5799d75 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 275 1.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08130 57f0046ef0c3c2f4f059c6ccd5799d75 279 Gene3D G3DSA:1.10.3720.10 67 272 1.5E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08130 57f0046ef0c3c2f4f059c6ccd5799d75 279 PANTHER PTHR30465:SF2 1 276 2.8E-104 T 22-04-2016 RMET_RS08130 57f0046ef0c3c2f4f059c6ccd5799d75 279 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 2 36 8.5E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RMET_RS08130 57f0046ef0c3c2f4f059c6ccd5799d75 279 SUPERFAMILY SSF161098 70 256 1.02E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 125 134 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 Gene3D G3DSA:3.40.630.10 342 432 1.4E-49 T 22-04-2016 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 Gene3D G3DSA:3.40.630.10 40 233 1.4E-49 T 22-04-2016 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 PANTHER PTHR11014 34 436 3.5E-137 T 22-04-2016 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 157 196 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 Gene3D G3DSA:3.30.70.360 234 339 3.6E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 Pfam PF07687 Peptidase dimerisation domain 230 330 9.4E-18 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 Pfam PF01546 Peptidase family M20/M25/M40 126 429 6.6E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 PIRSF PIRSF037238 40 432 1.1E-105 T 22-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 PANTHER PTHR11014:SF64 34 436 3.5E-137 T 22-04-2016 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 SUPERFAMILY SSF55031 233 344 1.57E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 SUPERFAMILY SSF53187 353 430 5.71E-47 T 22-04-2016 RMET_RS00135 3ab91eaebc68d4152428eb3b99f919d1 438 SUPERFAMILY SSF53187 40 241 5.71E-47 T 22-04-2016 RMET_RS06415 defab7f4da7b8a4c0fe041c01b9573a0 315 SUPERFAMILY SSF56349 31 298 2.38E-29 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS06415 defab7f4da7b8a4c0fe041c01b9573a0 315 PANTHER PTHR30349:SF5 28 300 3.5E-16 T 22-04-2016 RMET_RS06415 defab7f4da7b8a4c0fe041c01b9573a0 315 Pfam PF00589 Phage integrase family 106 294 2.8E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06415 defab7f4da7b8a4c0fe041c01b9573a0 315 Gene3D G3DSA:1.10.443.10 104 299 2.6E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06415 defab7f4da7b8a4c0fe041c01b9573a0 315 PANTHER PTHR30349 28 300 3.5E-16 T 22-04-2016 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 Gene3D G3DSA:3.40.50.300 82 349 4.8E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 SUPERFAMILY SSF52540 83 353 7.03E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 79 1.1E-17 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 348 4.2E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 Gene3D G3DSA:2.40.10.170 2 81 5.6E-28 T 22-04-2016 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 SUPERFAMILY SSF47917 351 466 4.45E-55 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 SUPERFAMILY SSF50615 1 81 5.23E-24 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.843 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 SMART SM00382 148 387 0.001 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 PANTHER PTHR15184 1 467 0.0 T 22-04-2016 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 PANTHER PTHR15184:SF44 1 467 0.0 T 22-04-2016 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 Gene3D G3DSA:1.10.1140.10 351 467 3.6E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS17560 e13dd7ed9d0e6ea8ef5a9db5574bd5f1 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 1.8E-250 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS09835 75c5b323fb2fe2214df7fe405ccc3b34 163 SUPERFAMILY SSF54690 3 148 3.01E-52 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS09835 75c5b323fb2fe2214df7fe405ccc3b34 163 PANTHER PTHR23404:SF2 24 163 5.4E-40 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS09835 75c5b323fb2fe2214df7fe405ccc3b34 163 Gene3D G3DSA:3.90.1170.40 2 148 8.1E-57 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS09835 75c5b323fb2fe2214df7fe405ccc3b34 163 Pfam PF02391 MoaE protein 5 118 9.2E-38 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS09835 75c5b323fb2fe2214df7fe405ccc3b34 163 PANTHER PTHR23404 24 163 5.4E-40 T 22-04-2016 RMET_RS13525 b2ce1eda664f07da8ff18a71ba6056a5 169 SUPERFAMILY SSF52121 5 151 7.85E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13525 b2ce1eda664f07da8ff18a71ba6056a5 169 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 147 1.2E-39 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13525 b2ce1eda664f07da8ff18a71ba6056a5 169 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 151 27.817 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13525 b2ce1eda664f07da8ff18a71ba6056a5 169 Gene3D G3DSA:3.40.50.960 5 152 2.9E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13525 b2ce1eda664f07da8ff18a71ba6056a5 169 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 147 4.0E-49 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13525 b2ce1eda664f07da8ff18a71ba6056a5 169 PANTHER PTHR21058 8 157 9.5E-62 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 71 87 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 Gene3D G3DSA:3.40.630.20 4 218 4.0E-68 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 4 208 41.073 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 132 146 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 PANTHER PTHR23402:SF1 3 221 1.0E-66 T 22-04-2016 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 6 222 2.0E-91 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 PIRSF PIRSF015592 3 220 3.2E-81 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 SUPERFAMILY SSF53182 5 221 7.98E-71 T 22-04-2016 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 6 29 5.3E-39 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 64 76 5.3E-39 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 134 150 5.3E-39 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 82 102 5.3E-39 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 Pfam PF01470 Pyroglutamyl peptidase 5 209 1.0E-80 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RMET_RS00350 b4f022215c6901f959bb6c99047d9b38 222 PANTHER PTHR23402 3 221 1.0E-66 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 SUPERFAMILY SSF53187 13 209 1.07E-48 T 22-04-2016 RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 SUPERFAMILY SSF53187 334 420 1.07E-48 T 22-04-2016 RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 Gene3D G3DSA:3.40.630.10 20 218 1.5E-49 T 22-04-2016 RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 Gene3D G3DSA:3.40.630.10 358 420 1.5E-49 T 22-04-2016 RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 Pfam PF01546 Peptidase family M20/M25/M40 98 417 5.8E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 SUPERFAMILY SSF55031 210 329 2.54E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 PANTHER PTHR11014 3 422 4.2E-57 T 22-04-2016 RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 Gene3D G3DSA:3.30.70.360 219 325 1.7E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 Pfam PF07687 Peptidase dimerisation domain 207 317 8.8E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS17295 37200ad7dd45029e412f311209dd1581 422 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 96 105 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RMET_RS01875 ef5af8f1ef4c1029154136ec2df46c5e 138 Pfam PF06155 Protein of unknown function (DUF971) 15 98 3.2E-30 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 RMET_RS01875 ef5af8f1ef4c1029154136ec2df46c5e 138 PANTHER PTHR35303 8 123 8.7E-49 T 22-04-2016 RMET_RS01875 ef5af8f1ef4c1029154136ec2df46c5e 138 PANTHER PTHR35303:SF1 8 123 8.7E-49 T 22-04-2016 RMET_RS29735 cf421c4ce63226ef3202e5d77ee68488 75 Gene3D G3DSA:3.40.50.300 6 74 8.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS29735 cf421c4ce63226ef3202e5d77ee68488 75 PANTHER PTHR24031:SF180 3 74 3.3E-20 T 22-04-2016 RMET_RS29735 cf421c4ce63226ef3202e5d77ee68488 75 PANTHER PTHR24031 3 74 3.3E-20 T 22-04-2016 RMET_RS29735 cf421c4ce63226ef3202e5d77ee68488 75 Pfam PF00270 DEAD/DEAH box helicase 8 73 1.2E-11 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS29735 cf421c4ce63226ef3202e5d77ee68488 75 SUPERFAMILY SSF52540 7 73 2.23E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01750 c495b7a2559a96a0b780dddbe0ad801b 289 Pfam PF05853 beta-keto acid cleavage enzyme 18 287 2.2E-62 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 RMET_RS01750 c495b7a2559a96a0b780dddbe0ad801b 289 Gene3D G3DSA:3.20.20.70 15 286 1.3E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS01750 c495b7a2559a96a0b780dddbe0ad801b 289 PANTHER PTHR37418 14 287 9.1E-29 T 22-04-2016 RMET_RS08200 3c076b916870ea684993001658de2928 404 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 11 282 1.8E-74 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RMET_RS08200 3c076b916870ea684993001658de2928 404 PANTHER PTHR16254 2 377 3.0E-120 T 22-04-2016 RMET_RS08200 3c076b916870ea684993001658de2928 404 PANTHER PTHR16254:SF6 2 377 3.0E-120 T 22-04-2016 RMET_RS08200 3c076b916870ea684993001658de2928 404 Pfam PF00999 Sodium/hydrogen exchanger family 8 372 1.7E-61 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 Pfam PF00155 Aminotransferase class I and II 175 487 5.2E-33 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 SUPERFAMILY SSF53383 151 487 4.62E-76 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 Gene3D G3DSA:3.40.640.10 176 396 4.3E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 PANTHER PTHR11751 119 493 5.4E-102 T 22-04-2016 RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 SMART SM00345 49 108 1.6E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 Gene3D G3DSA:1.10.10.10 40 110 4.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 SUPERFAMILY SSF46785 41 112 6.66E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 PANTHER PTHR11751:SF386 119 493 5.4E-102 T 22-04-2016 RMET_RS12570 1091f8bc6174c8195c369068fd1f68e8 515 Pfam PF00392 Bacterial regulatory proteins, gntR family 54 108 8.2E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS16260 1edfd9701386be1ec847baf2a6e63116 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 49.318 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RMET_RS16260 1edfd9701386be1ec847baf2a6e63116 256 PANTHER PTHR21235:SF2 1 256 2.7E-125 T 22-04-2016 RMET_RS16260 1edfd9701386be1ec847baf2a6e63116 256 SUPERFAMILY SSF51366 1 255 2.67E-88 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RMET_RS16260 1edfd9701386be1ec847baf2a6e63116 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 1.5E-112 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RMET_RS16260 1edfd9701386be1ec847baf2a6e63116 256 PANTHER PTHR21235 1 256 2.7E-125 T 22-04-2016 RMET_RS16260 1edfd9701386be1ec847baf2a6e63116 256 Pfam PF00977 Histidine biosynthesis protein 5 238 1.2E-90 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RMET_RS16260 1edfd9701386be1ec847baf2a6e63116 256 Gene3D G3DSA:3.20.20.70 4 256 1.1E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 Gene3D G3DSA:3.30.565.10 297 445 2.9E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 SMART SM00388 230 295 1.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 SMART SM00387 339 450 1.6E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 294 3.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 SUPERFAMILY SSF47384 214 294 8.44E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 Gene3D G3DSA:1.10.287.130 222 291 4.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 3.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 3.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 PANTHER PTHR24423:SF474 171 450 2.4E-61 T 22-04-2016 RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 SUPERFAMILY SSF55874 284 431 2.36E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 440 6.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15060 d4c0c0c9849fc1cac502b01020d30ba5 450 PANTHER PTHR24423 171 450 2.4E-61 T 22-04-2016 RMET_RS11930 9d0132cba4b2d89b23e0911b1ea8a82b 365 SUPERFAMILY SSF46626 222 324 8.88E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11930 9d0132cba4b2d89b23e0911b1ea8a82b 365 Gene3D G3DSA:1.10.760.10 227 321 3.3E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11930 9d0132cba4b2d89b23e0911b1ea8a82b 365 Gene3D G3DSA:1.10.760.10 100 216 6.1E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11930 9d0132cba4b2d89b23e0911b1ea8a82b 365 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 237 316 1.7E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11930 9d0132cba4b2d89b23e0911b1ea8a82b 365 SUPERFAMILY SSF46626 103 215 6.97E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11930 9d0132cba4b2d89b23e0911b1ea8a82b 365 PANTHER PTHR35008:SF4 100 358 1.9E-67 T 22-04-2016 RMET_RS11930 9d0132cba4b2d89b23e0911b1ea8a82b 365 PANTHER PTHR35008 100 358 1.9E-67 T 22-04-2016 RMET_RS01815 38ce4aa22e53fac4bced4b510f76e5ce 198 SUPERFAMILY SSF53448 13 197 7.89E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS01815 38ce4aa22e53fac4bced4b510f76e5ce 198 Gene3D G3DSA:3.90.550.10 14 198 8.3E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS01815 38ce4aa22e53fac4bced4b510f76e5ce 198 Pfam PF12804 MobA-like NTP transferase domain 14 175 3.7E-34 T 22-04-2016 IPR025877 MobA-like NTP transferase RMET_RS01815 38ce4aa22e53fac4bced4b510f76e5ce 198 PANTHER PTHR19136 14 197 1.6E-24 T 22-04-2016 RMET_RS01815 38ce4aa22e53fac4bced4b510f76e5ce 198 PANTHER PTHR19136:SF78 14 197 1.6E-24 T 22-04-2016 RMET_RS31320 4a45bd398c80104219c4499643f851b6 155 PANTHER PTHR11820:SF85 1 155 1.1E-78 T 22-04-2016 RMET_RS31320 4a45bd398c80104219c4499643f851b6 155 PANTHER PTHR11820 1 155 1.1E-78 T 22-04-2016 RMET_RS31320 4a45bd398c80104219c4499643f851b6 155 SUPERFAMILY SSF56529 1 155 4.97E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS31320 4a45bd398c80104219c4499643f851b6 155 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 1 155 6.3E-30 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS31320 4a45bd398c80104219c4499643f851b6 155 Gene3D G3DSA:3.90.850.10 2 154 6.2E-29 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 Gene3D G3DSA:3.30.420.40 93 290 1.1E-87 T 22-04-2016 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 Gene3D G3DSA:3.30.420.40 1 91 3.1E-31 T 22-04-2016 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 SUPERFAMILY SSF53067 1 93 1.49E-28 T 22-04-2016 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 PANTHER PTHR10196 1 290 2.9E-150 T 22-04-2016 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 SUPERFAMILY SSF53067 93 291 8.1E-73 T 22-04-2016 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 90 2.0E-24 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 PANTHER PTHR10196:SF69 1 290 2.9E-150 T 22-04-2016 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 99 288 3.7E-60 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RMET_RS29085 c1256068fc7ffcc78d3ac4a813009836 291 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 200 220 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 PANTHER PTHR24095:SF46 9 667 2.5E-278 T 22-04-2016 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 Gene3D G3DSA:3.30.300.30 532 637 7.4E-13 T 22-04-2016 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 Gene3D G3DSA:3.40.50.980 108 281 9.3E-25 T 22-04-2016 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 42 96 6.0E-14 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 PANTHER PTHR24095 9 667 2.5E-278 T 22-04-2016 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 Pfam PF00501 AMP-binding enzyme 121 533 3.7E-44 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 9 655 2.6E-238 T 22-04-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 Gene3D G3DSA:3.40.50.980 282 413 1.5E-13 T 22-04-2016 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 SUPERFAMILY SSF56801 26 653 1.44E-118 T 22-04-2016 RMET_RS13550 1bf2ca3f5cfaf70f4630245117a93ec1 669 ProSitePatterns PS00455 Putative AMP-binding domain signature. 276 287 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS12385 7effd35768b898f795541d3c20010c15 235 Gene3D G3DSA:3.20.20.70 10 227 1.5E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS12385 7effd35768b898f795541d3c20010c15 235 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 11 228 41.53 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RMET_RS12385 7effd35768b898f795541d3c20010c15 235 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 13 223 1.8E-46 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RMET_RS12385 7effd35768b898f795541d3c20010c15 235 PANTHER PTHR22854 10 227 5.3E-63 T 22-04-2016 RMET_RS12385 7effd35768b898f795541d3c20010c15 235 SUPERFAMILY SSF51366 11 226 7.06E-59 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RMET_RS12385 7effd35768b898f795541d3c20010c15 235 PANTHER PTHR22854:SF6 10 227 5.3E-63 T 22-04-2016 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 Pfam PF07969 Amidohydrolase family 103 580 3.2E-100 T 22-04-2016 IPR013108 Amidohydrolase 3 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 PANTHER PTHR22642:SF2 46 579 3.5E-147 T 22-04-2016 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 PANTHER PTHR22642 46 579 3.5E-147 T 22-04-2016 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 SUPERFAMILY SSF51338 541 581 1.3E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 SUPERFAMILY SSF51338 35 115 1.3E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 SUPERFAMILY SSF51556 252 542 7.21E-32 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 SUPERFAMILY SSF51556 114 134 7.21E-32 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 Gene3D G3DSA:2.30.40.10 526 553 4.0E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 Gene3D G3DSA:2.30.40.10 54 116 1.1E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 Gene3D G3DSA:2.30.40.10 554 580 1.1E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS00040 4921fa3e3014840582d76f2df38545fa 584 Gene3D G3DSA:3.20.20.140 255 525 6.0E-29 T 22-04-2016 RMET_RS02910 aa766f45368f9981bef82ae308cd5856 182 PANTHER PTHR33420 4 182 1.1E-40 T 22-04-2016 RMET_RS02910 aa766f45368f9981bef82ae308cd5856 182 SUPERFAMILY SSF49401 28 181 4.57E-27 T 22-04-2016 IPR008966 Adhesion domain RMET_RS02910 aa766f45368f9981bef82ae308cd5856 182 Gene3D G3DSA:2.60.40.1090 27 181 1.1E-28 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RMET_RS02910 aa766f45368f9981bef82ae308cd5856 182 Pfam PF16970 Type-1 fimbrial protein, A 56 182 8.0E-28 T 22-04-2016 RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 Pfam PF00155 Aminotransferase class I and II 148 454 4.9E-29 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.8E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 Gene3D G3DSA:3.90.1150.10 351 468 9.7E-9 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 SUPERFAMILY SSF53383 60 466 1.75E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 Gene3D G3DSA:3.40.640.10 146 350 2.8E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 PANTHER PTHR11751:SF314 86 465 7.0E-141 T 22-04-2016 RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 SMART SM00345 7 66 3.8E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 PANTHER PTHR11751 86 465 7.0E-141 T 22-04-2016 RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 SUPERFAMILY SSF46785 2 70 3.63E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05665 e55bb869a26cf798443e76441fa02991 475 Gene3D G3DSA:1.10.10.10 2 67 8.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07500 1dbc6bd768448417653821b2a89d4b0e 195 SUPERFAMILY SSF51306 68 190 7.85E-19 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RMET_RS07500 1dbc6bd768448417653821b2a89d4b0e 195 Pfam PF10502 Signal peptidase, peptidase S26 46 191 1.3E-53 T 22-04-2016 IPR019533 Peptidase S26 RMET_RS07500 1dbc6bd768448417653821b2a89d4b0e 195 Gene3D G3DSA:2.10.109.10 47 115 1.4E-8 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS07500 1dbc6bd768448417653821b2a89d4b0e 195 Gene3D G3DSA:2.10.109.10 153 192 1.4E-8 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 Gene3D G3DSA:1.10.10.10 7 83 3.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 PANTHER PTHR30126 5 280 2.8E-61 T 22-04-2016 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 Gene3D G3DSA:3.40.190.10 177 258 8.0E-19 T 22-04-2016 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 SUPERFAMILY SSF46785 8 90 1.33E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 Gene3D G3DSA:3.40.190.10 106 176 5.6E-15 T 22-04-2016 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.1E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 SUPERFAMILY SSF53850 99 293 4.95E-35 T 22-04-2016 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 PANTHER PTHR30126:SF11 5 280 2.8E-61 T 22-04-2016 RMET_RS15015 adb906f89f9daf5f4db5a6ed8263197c 295 Pfam PF03466 LysR substrate binding domain 98 290 3.8E-38 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS07820 e750a122a842c852c68140251d359c1e 241 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 7 239 5.1E-69 T 22-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ RMET_RS07820 e750a122a842c852c68140251d359c1e 241 Pfam PF13605 Domain of unknown function (DUF4141) 5 36 6.4E-10 T 22-04-2016 IPR025415 Protein of unknown function DUF4141 RMET_RS07820 e750a122a842c852c68140251d359c1e 241 SUPERFAMILY SSF56954 1 211 6.02E-5 T 22-04-2016 RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 Gene3D G3DSA:3.40.190.10 193 257 2.1E-11 T 22-04-2016 RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 Gene3D G3DSA:1.10.10.10 3 83 7.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 Gene3D G3DSA:3.40.190.10 89 192 5.7E-14 T 22-04-2016 RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 PANTHER PTHR30126 1 274 3.0E-46 T 22-04-2016 RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 SUPERFAMILY SSF53850 90 293 1.36E-23 T 22-04-2016 RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 Pfam PF03466 LysR substrate binding domain 89 291 8.5E-25 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 SUPERFAMILY SSF46785 4 84 3.95E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04130 3c39cd96288c24482173ad5a3757b4e4 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.9E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 Gene3D G3DSA:3.40.50.720 176 201 3.2E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 Gene3D G3DSA:3.40.50.1770 4 175 6.6E-52 T 22-04-2016 RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 SMART SM01003 6 139 1.8E-52 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 SUPERFAMILY SSF51735 139 244 2.5E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 Gene3D G3DSA:3.40.50.1770 202 242 2.4E-6 T 22-04-2016 RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 139 1.7E-33 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 PANTHER PTHR10160 3 244 1.5E-90 T 22-04-2016 RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 SUPERFAMILY SSF52283 4 170 3.32E-41 T 22-04-2016 RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 SMART SM01002 148 251 9.0E-13 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 PANTHER PTHR10160:SF19 3 244 1.5E-90 T 22-04-2016 RMET_RS07685 83e74b8c28044d99d04c5a7ad80fd756 251 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 144 231 1.3E-24 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RMET_RS04735 0a81828278d20a7e22e3f57ddd264130 102 Pfam PF10993 Protein of unknown function (DUF2818) 8 98 8.6E-36 T 22-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RMET_RS04735 0a81828278d20a7e22e3f57ddd264130 102 PIRSF PIRSF019883 1 102 1.4E-42 T 22-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RMET_RS00845 56f457211047172b46c346d73e6c3572 376 Gene3D G3DSA:3.20.20.70 162 375 1.3E-50 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS00845 56f457211047172b46c346d73e6c3572 376 PANTHER PTHR20857 162 375 9.8E-39 T 22-04-2016 RMET_RS00845 56f457211047172b46c346d73e6c3572 376 SUPERFAMILY SSF51391 163 372 3.66E-47 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RMET_RS00845 56f457211047172b46c346d73e6c3572 376 Pfam PF02581 Thiamine monophosphate synthase/TENI 180 358 5.3E-44 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RMET_RS11980 9cb13148f665b30be2037bb2958140c9 148 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 33.113 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RMET_RS11980 9cb13148f665b30be2037bb2958140c9 148 PANTHER PTHR34128:SF1 4 145 8.1E-54 T 22-04-2016 RMET_RS11980 9cb13148f665b30be2037bb2958140c9 148 SUPERFAMILY SSF82093 29 136 7.06E-40 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RMET_RS11980 9cb13148f665b30be2037bb2958140c9 148 PANTHER PTHR34128 4 145 8.1E-54 T 22-04-2016 RMET_RS11980 9cb13148f665b30be2037bb2958140c9 148 Gene3D G3DSA:2.40.50.140 25 124 6.6E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS11980 9cb13148f665b30be2037bb2958140c9 148 Pfam PF03100 CcmE 4 130 1.0E-47 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RMET_RS03130 4c8b3f2e0cc2e403ed4bc1f06f906ab2 161 Gene3D G3DSA:2.30.110.20 1 158 8.1E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp RMET_RS03130 4c8b3f2e0cc2e403ed4bc1f06f906ab2 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 1.4E-51 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp RMET_RS03130 4c8b3f2e0cc2e403ed4bc1f06f906ab2 161 PANTHER PTHR34319:SF2 1 160 5.8E-102 T 22-04-2016 RMET_RS03130 4c8b3f2e0cc2e403ed4bc1f06f906ab2 161 SUPERFAMILY SSF141452 2 160 1.24E-42 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp RMET_RS03130 4c8b3f2e0cc2e403ed4bc1f06f906ab2 161 PANTHER PTHR34319 1 160 5.8E-102 T 22-04-2016 RMET_RS03130 4c8b3f2e0cc2e403ed4bc1f06f906ab2 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 3.9E-36 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp RMET_RS08700 f47eae412bbd48d046cb6733bdf8bcde 497 PANTHER PTHR30203 17 484 5.0E-159 T 22-04-2016 RMET_RS08700 f47eae412bbd48d046cb6733bdf8bcde 497 Gene3D G3DSA:1.20.1600.10 70 488 2.6E-107 T 22-04-2016 RMET_RS08700 f47eae412bbd48d046cb6733bdf8bcde 497 PANTHER PTHR30203:SF15 17 484 5.0E-159 T 22-04-2016 RMET_RS08700 f47eae412bbd48d046cb6733bdf8bcde 497 Pfam PF02321 Outer membrane efflux protein 84 273 8.4E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS08700 f47eae412bbd48d046cb6733bdf8bcde 497 Pfam PF02321 Outer membrane efflux protein 302 481 1.6E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS08700 f47eae412bbd48d046cb6733bdf8bcde 497 SUPERFAMILY SSF56954 7 41 1.44E-102 T 22-04-2016 RMET_RS08700 f47eae412bbd48d046cb6733bdf8bcde 497 SUPERFAMILY SSF56954 74 485 1.44E-102 T 22-04-2016 RMET_RS08700 f47eae412bbd48d046cb6733bdf8bcde 497 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 483 3.5E-117 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS06625 087359a92f41a3258aadf89b29c258f2 104 Pfam PF02406 MmoB/DmpM family 13 99 7.7E-30 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS06625 087359a92f41a3258aadf89b29c258f2 104 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 35 104 9.0E-35 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS06625 087359a92f41a3258aadf89b29c258f2 104 SUPERFAMILY SSF56029 8 101 6.8E-35 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS06625 087359a92f41a3258aadf89b29c258f2 104 Gene3D G3DSA:3.90.56.10 2 102 5.5E-46 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS13320 6a49cdd6bcad65fde5b9c893ecc95d46 418 Gene3D G3DSA:3.40.640.10 29 258 3.3E-21 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS13320 6a49cdd6bcad65fde5b9c893ecc95d46 418 PIRSF PIRSF038800 1 409 3.7E-142 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RMET_RS13320 6a49cdd6bcad65fde5b9c893ecc95d46 418 Pfam PF00266 Aminotransferase class-V 79 356 4.5E-13 T 22-04-2016 IPR000192 Aminotransferase class V domain RMET_RS13320 6a49cdd6bcad65fde5b9c893ecc95d46 418 Gene3D G3DSA:3.90.1150.10 259 418 1.4E-61 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS13320 6a49cdd6bcad65fde5b9c893ecc95d46 418 TIGRFAM TIGR01814 kynureninase: kynureninase 9 402 3.1E-106 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RMET_RS13320 6a49cdd6bcad65fde5b9c893ecc95d46 418 SUPERFAMILY SSF53383 6 402 2.21E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS13320 6a49cdd6bcad65fde5b9c893ecc95d46 418 Hamap MF_01970 Kynureninase [kynU]. 1 401 34.884 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RMET_RS13320 6a49cdd6bcad65fde5b9c893ecc95d46 418 PANTHER PTHR14084 4 411 7.4E-137 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 368 3.7E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 446 1.5E-14 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Gene3D G3DSA:3.40.120.10 180 254 6.3E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 PANTHER PTHR22573 3 447 1.0E-154 T 22-04-2016 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Gene3D G3DSA:3.40.120.10 255 369 4.5E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Gene3D G3DSA:3.40.120.10 3 157 2.3E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 139 8.8E-43 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 SUPERFAMILY SSF55957 361 446 5.36E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 SUPERFAMILY SSF53738 160 259 3.81E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 PANTHER PTHR22573:SF15 3 447 1.0E-154 T 22-04-2016 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 446 2.2E-180 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 258 5.3E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.4E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 178 197 1.4E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 1.4E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 SUPERFAMILY SSF53738 262 369 3.02E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 SUPERFAMILY SSF53738 2 185 5.49E-49 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 444 45.968 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS10975 90b447aa0f8b1df0249086f29ed5d9ab 447 Gene3D G3DSA:3.30.310.50 373 446 5.7E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 PANTHER PTHR19278 1 225 9.0E-65 T 22-04-2016 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 PANTHER PTHR19278:SF1 1 225 9.0E-65 T 22-04-2016 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 SMART SM00934 17 255 1.2E-49 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 SUPERFAMILY SSF51366 3 257 1.41E-78 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 255 3.5E-74 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 268 36.675 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 248 1.7E-34 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS15285 c662f386317222c91a5d823f40f56900 272 Gene3D G3DSA:3.20.20.70 5 257 6.3E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 SUPERFAMILY SSF82866 291 490 9.29E-44 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 SUPERFAMILY SSF82693 136 182 1.31E-19 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 SUPERFAMILY SSF82693 586 681 9.42E-13 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 SUPERFAMILY SSF82693 269 325 1.31E-19 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 Pfam PF00873 AcrB/AcrD/AcrF family 4 1041 5.4E-303 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 Gene3D G3DSA:3.30.2090.10 738 819 1.9E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 Gene3D G3DSA:1.20.1640.10 286 494 1.4E-55 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PANTHER PTHR32063:SF21 1 497 0.0 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PANTHER PTHR32063:SF21 523 1043 0.0 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 Gene3D G3DSA:3.30.2090.10 184 268 4.0E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 SUPERFAMILY SSF82714 185 267 2.49E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 SUPERFAMILY SSF82714 738 821 2.09E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.1E-62 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 5.1E-62 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.1E-62 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.1E-62 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 5.1E-62 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.1E-62 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 5.1E-62 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 Gene3D G3DSA:3.30.70.1430 589 678 1.2E-7 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 SUPERFAMILY SSF82866 819 1043 1.96E-42 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 Gene3D G3DSA:3.30.70.1430 41 141 1.0E-26 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 Gene3D G3DSA:1.10.3850.10 827 1043 3.4E-51 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 SUPERFAMILY SSF82693 41 134 1.08E-20 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PANTHER PTHR32063 1 497 0.0 T 22-04-2016 RMET_RS17995 640205334242bb1f208903a7c44cfd3d 1069 PANTHER PTHR32063 523 1043 0.0 T 22-04-2016 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 SUPERFAMILY SSF47384 217 286 1.55E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 436 8.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 SMART SM00304 178 231 4.0E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 Gene3D G3DSA:3.30.565.10 277 436 6.9E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 Pfam PF00672 HAMP domain 161 227 5.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 SUPERFAMILY SSF55874 291 436 7.07E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 SMART SM00387 329 437 5.7E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 PANTHER PTHR24423 173 437 9.4E-56 T 22-04-2016 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 274 9.5E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 Gene3D G3DSA:1.10.287.130 222 276 7.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17470 757e739a51e8a42ae48de9947044fbdc 437 SMART SM00388 232 290 2.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS26460 e8fbd195530ca2de345ba69f4957929d 79 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 45 59 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS26460 e8fbd195530ca2de345ba69f4957929d 79 SUPERFAMILY SSF56059 7 79 1.33E-17 T 22-04-2016 RMET_RS26460 e8fbd195530ca2de345ba69f4957929d 79 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 8 78 2.0E-15 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS26460 e8fbd195530ca2de345ba69f4957929d 79 PANTHER PTHR18866:SF102 1 79 6.2E-35 T 22-04-2016 RMET_RS26460 e8fbd195530ca2de345ba69f4957929d 79 Gene3D G3DSA:3.30.1490.20 20 79 4.8E-21 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS26460 e8fbd195530ca2de345ba69f4957929d 79 PANTHER PTHR18866 1 79 6.2E-35 T 22-04-2016 RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 SUPERFAMILY SSF50447 40 139 9.53E-16 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 41 220 23.137 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 Pfam PF05239 PRC-barrel domain 143 215 3.5E-10 T 22-04-2016 IPR027275 PRC-barrel domain RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 Gene3D G3DSA:2.40.30.60 36 140 3.2E-31 T 22-04-2016 IPR002676 RimM protein GO:0006364 RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 SUPERFAMILY SSF50346 146 217 1.35E-18 T 22-04-2016 IPR011033 PRC-barrel-like RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 PANTHER PTHR33692 37 219 1.8E-42 T 22-04-2016 RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 Gene3D G3DSA:2.30.30.240 146 220 3.3E-25 T 22-04-2016 RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 Pfam PF01782 RimM N-terminal domain 43 137 7.8E-22 T 22-04-2016 IPR002676 RimM protein GO:0006364 RMET_RS03760 22c1bfbbbb1c18609a0c1741ffb07bab 220 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 42 217 1.2E-41 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 SMART SM00387 333 448 1.7E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 5.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 5.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 Gene3D G3DSA:1.10.287.130 226 281 7.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 Pfam PF00672 HAMP domain 164 232 7.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 294 1.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 PANTHER PTHR24423 177 434 4.1E-46 T 22-04-2016 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 SMART SM00388 236 295 3.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 SMART SM00304 183 235 4.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 SUPERFAMILY SSF47384 221 293 6.08E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 48 154 2.5E-38 T 22-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 Gene3D G3DSA:3.30.565.10 282 435 5.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 434 4.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS09765 d1b6df6cb3e7d11316221645d3ee37b3 449 SUPERFAMILY SSF55874 285 435 5.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 Gene3D G3DSA:2.60.40.1250 32 147 1.4E-29 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 Gene3D G3DSA:3.40.30.10 499 610 2.6E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 PANTHER PTHR32234:SF0 195 612 1.1E-145 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 PANTHER PTHR32234:SF0 32 173 1.1E-145 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 SUPERFAMILY SSF52833 500 607 1.05E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 Pfam PF11412 Disulphide bond corrector protein DsbC 35 143 5.1E-25 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 ProSitePatterns PS00194 Thioredoxin family active site. 519 537 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 Pfam PF13899 Thioredoxin-like 502 584 1.6E-12 T 22-04-2016 RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 SUPERFAMILY SSF74863 33 146 2.35E-28 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 PANTHER PTHR32234 195 612 1.1E-145 T 22-04-2016 RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 PANTHER PTHR32234 32 173 1.1E-145 T 22-04-2016 RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 202 407 2.4E-12 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RMET_RS12005 855818d4c3c1a1c3877aeb94adfcbc66 612 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 4 611 32.447 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RMET_RS14815 94624efc5c042e586c353aaa2ebfc5c5 188 PANTHER PTHR30529 11 188 1.8E-51 T 22-04-2016 RMET_RS14815 94624efc5c042e586c353aaa2ebfc5c5 188 Pfam PF01292 Prokaryotic cytochrome b561 15 185 8.3E-27 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RMET_RS14815 94624efc5c042e586c353aaa2ebfc5c5 188 PANTHER PTHR30529:SF5 11 188 1.8E-51 T 22-04-2016 RMET_RS14815 94624efc5c042e586c353aaa2ebfc5c5 188 SUPERFAMILY SSF81342 11 185 3.77E-34 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RMET_RS08575 1ca12184ecf6bf27faa9f6387568cbe0 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 61 339 1.1E-7 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS08575 1ca12184ecf6bf27faa9f6387568cbe0 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 295 1.2E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS08575 1ca12184ecf6bf27faa9f6387568cbe0 378 PANTHER PTHR30367 31 378 4.8E-60 T 22-04-2016 RMET_RS08575 1ca12184ecf6bf27faa9f6387568cbe0 378 SUPERFAMILY SSF111369 167 301 2.22E-9 T 22-04-2016 RMET_RS08575 1ca12184ecf6bf27faa9f6387568cbe0 378 SUPERFAMILY SSF111369 63 142 5.23E-7 T 22-04-2016 RMET_RS08575 1ca12184ecf6bf27faa9f6387568cbe0 378 Gene3D G3DSA:2.40.50.100 65 96 6.9E-13 T 22-04-2016 RMET_RS08575 1ca12184ecf6bf27faa9f6387568cbe0 378 Gene3D G3DSA:2.40.50.100 218 250 6.9E-13 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 8.0E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 8.0E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.0E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 8.0E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 8.0E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 8.0E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 8.0E-40 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 SUPERFAMILY SSF82866 799 918 3.14E-22 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 SUPERFAMILY SSF82693 139 182 1.23E-18 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 SUPERFAMILY SSF82693 270 327 1.23E-18 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 Gene3D G3DSA:3.30.2090.10 183 266 1.0E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 Gene3D G3DSA:3.30.2090.10 716 799 7.4E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 SUPERFAMILY SSF82693 42 127 3.14E-16 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 Gene3D G3DSA:3.30.70.1430 42 142 5.8E-20 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 918 7.3E-257 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 Gene3D G3DSA:1.10.3850.10 281 500 2.5E-59 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 Gene3D G3DSA:1.10.3850.10 806 916 1.4E-21 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 SUPERFAMILY SSF82714 185 266 1.83E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 Pfam PF00873 AcrB/AcrD/AcrF family 6 918 3.6E-240 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PANTHER PTHR32063 2 919 0.0 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 SUPERFAMILY SSF82714 716 798 4.84E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 PANTHER PTHR32063:SF24 2 919 0.0 T 22-04-2016 RMET_RS15090 73a28aa51f7c25ffe50489e2dc43bd02 919 SUPERFAMILY SSF82866 293 498 8.11E-43 T 22-04-2016 RMET_RS00205 7332d209f0516edb8a0860213b30522c 610 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 6 602 35.751 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS00205 7332d209f0516edb8a0860213b30522c 610 PIRSF PIRSF001294 6 604 7.6E-239 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS00205 7332d209f0516edb8a0860213b30522c 610 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 240 601 1.8E-161 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS00205 7332d209f0516edb8a0860213b30522c 610 PANTHER PTHR30607 249 606 5.8E-294 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS00205 7332d209f0516edb8a0860213b30522c 610 PANTHER PTHR30607 6 219 5.8E-294 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS00205 7332d209f0516edb8a0860213b30522c 610 Pfam PF03814 Potassium-transporting ATPase A subunit 15 600 1.9E-244 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS10650 faccfbff4de6fc0f0696065ab3031f9b 204 SUPERFAMILY SSF111304 6 204 3.4E-72 T 22-04-2016 IPR023627 Recombination protein RecR RMET_RS10650 faccfbff4de6fc0f0696065ab3031f9b 204 Pfam PF02132 RecR protein 42 80 1.8E-14 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger RMET_RS10650 faccfbff4de6fc0f0696065ab3031f9b 204 PANTHER PTHR30446:SF0 3 204 4.2E-96 T 22-04-2016 RMET_RS10650 faccfbff4de6fc0f0696065ab3031f9b 204 Hamap MF_00017 Recombination protein RecR [recR]. 1 204 96.55 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RMET_RS10650 faccfbff4de6fc0f0696065ab3031f9b 204 PANTHER PTHR30446 3 204 4.2E-96 T 22-04-2016 RMET_RS10650 faccfbff4de6fc0f0696065ab3031f9b 204 Pfam PF13662 Toprim domain 84 177 1.1E-21 T 22-04-2016 IPR006171 Toprim domain RMET_RS10650 faccfbff4de6fc0f0696065ab3031f9b 204 TIGRFAM TIGR00615 recR: recombination protein RecR 6 202 3.6E-67 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RMET_RS10650 faccfbff4de6fc0f0696065ab3031f9b 204 SMART SM00493 82 171 1.1E-6 T 22-04-2016 IPR006171 Toprim domain RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 SUPERFAMILY SSF51246 337 453 3.61E-35 T 22-04-2016 IPR011054 Rudiment single hybrid motif RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 329 1.7E-76 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 SUPERFAMILY SSF51230 579 655 1.83E-18 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 Gene3D G3DSA:2.40.50.100 585 655 7.5E-22 T 22-04-2016 RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 Gene3D G3DSA:3.40.50.20 8 135 1.6E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 Pfam PF02785 Biotin carboxylase C-terminal domain 342 449 5.0E-31 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 612 629 - T 22-04-2016 IPR001882 Biotin-binding site RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 SUPERFAMILY SSF52440 4 119 1.22E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 116 1.6E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 Pfam PF00364 Biotin-requiring enzyme 598 654 1.8E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 Gene3D G3DSA:3.30.1490.20 136 207 2.4E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 SMART SM00878 342 449 7.9E-49 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 Gene3D G3DSA:3.30.470.20 211 453 2.0E-101 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 PANTHER PTHR18866 6 661 6.2E-300 T 22-04-2016 RMET_RS08640 b6d4889fe23e45696c81363aa7b6631b 665 SUPERFAMILY SSF56059 89 349 5.66E-67 T 22-04-2016 RMET_RS15365 3dea20813329566df9eb51c6e0f53048 304 PANTHER PTHR18895 16 289 8.5E-92 T 22-04-2016 RMET_RS15365 3dea20813329566df9eb51c6e0f53048 304 PIRSF PIRSF000401 1 298 5.3E-98 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RMET_RS15365 3dea20813329566df9eb51c6e0f53048 304 Gene3D G3DSA:3.40.50.150 108 291 1.1E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS15365 3dea20813329566df9eb51c6e0f53048 304 SUPERFAMILY SSF53335 68 276 2.69E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS15365 3dea20813329566df9eb51c6e0f53048 304 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 5 290 2.5E-71 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RMET_RS15365 3dea20813329566df9eb51c6e0f53048 304 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 296 3.4E-93 T 22-04-2016 RMET_RS15365 3dea20813329566df9eb51c6e0f53048 304 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 296 32.316 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RMET_RS15365 3dea20813329566df9eb51c6e0f53048 304 PANTHER PTHR18895:SF69 16 289 8.5E-92 T 22-04-2016 RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 SUPERFAMILY SSF54862 3 102 2.79E-25 T 22-04-2016 RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 PANTHER PTHR11938 1 82 9.7E-41 T 22-04-2016 RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 PANTHER PTHR11938:SF101 1 82 9.7E-41 T 22-04-2016 RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 Pfam PF12800 4Fe-4S binding domain 7 23 0.21 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 Gene3D G3DSA:3.30.70.20 4 103 4.3E-22 T 22-04-2016 RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 Pfam PF00037 4Fe-4S binding domain 34 56 1.8E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 1.8E-20 T 22-04-2016 IPR022569 Ferredoxin, C-terminal RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.5E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.5E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RMET_RS12295 3f1fe837663983e159ac976fb92dae08 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.5E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RMET_RS01130 1527db05268d54161c721f1416b3b2af 325 Gene3D G3DSA:3.20.20.70 13 307 3.1E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS01130 1527db05268d54161c721f1416b3b2af 325 Pfam PF03060 Nitronate monooxygenase 16 310 2.4E-23 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RMET_RS01130 1527db05268d54161c721f1416b3b2af 325 PANTHER PTHR32332:SF21 1 325 5.3E-150 T 22-04-2016 RMET_RS01130 1527db05268d54161c721f1416b3b2af 325 SUPERFAMILY SSF51412 9 307 4.21E-61 T 22-04-2016 RMET_RS01130 1527db05268d54161c721f1416b3b2af 325 PANTHER PTHR32332 1 325 5.3E-150 T 22-04-2016 RMET_RS13760 f1c57951e983cc460cc3e093bfed5441 145 SUPERFAMILY SSF53098 13 143 3.49E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS13760 f1c57951e983cc460cc3e093bfed5441 145 SMART SM00732 13 117 1.5E-23 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RMET_RS13760 f1c57951e983cc460cc3e093bfed5441 145 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 16 141 8.2E-22 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RMET_RS13760 f1c57951e983cc460cc3e093bfed5441 145 PANTHER PTHR33317 3 145 1.3E-22 T 22-04-2016 RMET_RS13760 f1c57951e983cc460cc3e093bfed5441 145 Gene3D G3DSA:3.30.420.140 13 143 1.4E-33 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RMET_RS13760 f1c57951e983cc460cc3e093bfed5441 145 Pfam PF03652 Holliday junction resolvase 14 142 2.9E-29 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RMET_RS13760 f1c57951e983cc460cc3e093bfed5441 145 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 13 144 20.243 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RMET_RS02255 93769f54055ea6a40ba5c0d46836c46a 193 Gene3D G3DSA:3.40.50.1000 3 180 5.0E-53 T 22-04-2016 IPR023214 HAD-like domain RMET_RS02255 93769f54055ea6a40ba5c0d46836c46a 193 PANTHER PTHR23133:SF7 7 180 3.3E-73 T 22-04-2016 RMET_RS02255 93769f54055ea6a40ba5c0d46836c46a 193 SUPERFAMILY SSF56784 4 180 2.28E-43 T 22-04-2016 IPR023214 HAD-like domain RMET_RS02255 93769f54055ea6a40ba5c0d46836c46a 193 PIRSF PIRSF004682 1 185 5.1E-51 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 RMET_RS02255 93769f54055ea6a40ba5c0d46836c46a 193 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 8 146 7.9E-44 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 RMET_RS02255 93769f54055ea6a40ba5c0d46836c46a 193 PANTHER PTHR23133 7 180 3.3E-73 T 22-04-2016 RMET_RS02255 93769f54055ea6a40ba5c0d46836c46a 193 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 149 2.5E-34 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RMET_RS02255 93769f54055ea6a40ba5c0d46836c46a 193 Pfam PF08645 Polynucleotide kinase 3 phosphatase 16 119 2.8E-8 T 22-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase RMET_RS14510 221b605829be59b695ce6fc080f79181 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 416 1.0E-224 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 PANTHER PTHR11835 1 164 5.1E-238 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 PANTHER PTHR11835 188 255 5.1E-238 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 PANTHER PTHR11835 275 416 5.1E-238 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 PANTHER PTHR11835:SF52 1 164 5.1E-238 T 22-04-2016 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 PANTHER PTHR11835:SF52 188 255 5.1E-238 T 22-04-2016 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 PANTHER PTHR11835:SF52 275 416 5.1E-238 T 22-04-2016 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 SUPERFAMILY SSF53659 2 416 2.69E-145 T 22-04-2016 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 410 8.8E-114 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 SMART SM01329 28 412 3.1E-174 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS14510 221b605829be59b695ce6fc080f79181 416 Gene3D G3DSA:3.40.718.10 11 416 1.9E-161 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS02585 7020e96c486246e696b811f2036d2b22 492 Pfam PF02321 Outer membrane efflux protein 75 258 4.6E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS02585 7020e96c486246e696b811f2036d2b22 492 Pfam PF02321 Outer membrane efflux protein 283 447 6.8E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS02585 7020e96c486246e696b811f2036d2b22 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 467 2.6E-133 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS02585 7020e96c486246e696b811f2036d2b22 492 Gene3D G3DSA:1.20.1600.10 63 470 1.2E-112 T 22-04-2016 RMET_RS02585 7020e96c486246e696b811f2036d2b22 492 PANTHER PTHR30203 16 486 1.9E-123 T 22-04-2016 RMET_RS02585 7020e96c486246e696b811f2036d2b22 492 SUPERFAMILY SSF56954 66 469 1.31E-110 T 22-04-2016 RMET_RS02585 7020e96c486246e696b811f2036d2b22 492 SUPERFAMILY SSF56954 6 33 1.31E-110 T 22-04-2016 RMET_RS02585 7020e96c486246e696b811f2036d2b22 492 PANTHER PTHR30203:SF7 16 486 1.9E-123 T 22-04-2016 RMET_RS01925 d7138fdc6f6b9fcdd99176422c5e39c2 163 SUPERFAMILY SSF55811 2 144 1.49E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS01925 d7138fdc6f6b9fcdd99176422c5e39c2 163 Pfam PF00293 NUDIX domain 7 140 1.3E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS01925 d7138fdc6f6b9fcdd99176422c5e39c2 163 Gene3D G3DSA:3.90.79.10 4 143 1.5E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS01925 d7138fdc6f6b9fcdd99176422c5e39c2 163 PRINTS PR01404 DATP pyrophosphohydrolase signature 69 88 3.5E-14 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RMET_RS01925 d7138fdc6f6b9fcdd99176422c5e39c2 163 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 3.5E-14 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RMET_RS01925 d7138fdc6f6b9fcdd99176422c5e39c2 163 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 3.5E-14 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RMET_RS01925 d7138fdc6f6b9fcdd99176422c5e39c2 163 PANTHER PTHR22769:SF28 1 141 2.6E-28 T 22-04-2016 RMET_RS01925 d7138fdc6f6b9fcdd99176422c5e39c2 163 PANTHER PTHR22769 1 141 2.6E-28 T 22-04-2016 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 Gene3D G3DSA:1.10.10.60 36 90 2.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 SUPERFAMILY SSF46689 89 133 3.3E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 PANTHER PTHR11019 6 142 1.1E-29 T 22-04-2016 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 118 134 5.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 103 118 5.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 PANTHER PTHR11019:SF53 6 142 1.1E-29 T 22-04-2016 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 SUPERFAMILY SSF46689 36 85 7.77E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 SMART SM00342 52 134 1.1E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 Pfam PF12833 Helix-turn-helix domain 58 133 5.6E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 Gene3D G3DSA:1.10.10.60 91 133 8.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07510 b8890a1f755988924f0ed55b8f1b751d 147 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 89 130 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RMET_RS12870 f1e8dcbf1814771881804f1c08542b32 458 Gene3D G3DSA:1.10.443.10 264 431 5.3E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS12870 f1e8dcbf1814771881804f1c08542b32 458 Pfam PF00589 Phage integrase family 265 432 1.5E-14 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS12870 f1e8dcbf1814771881804f1c08542b32 458 PANTHER PTHR30349:SF20 181 432 3.7E-22 T 22-04-2016 RMET_RS12870 f1e8dcbf1814771881804f1c08542b32 458 SUPERFAMILY SSF56349 157 446 2.94E-39 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS12870 f1e8dcbf1814771881804f1c08542b32 458 PANTHER PTHR30349 181 432 3.7E-22 T 22-04-2016 RMET_RS12870 f1e8dcbf1814771881804f1c08542b32 458 Gene3D G3DSA:1.10.150.130 179 254 6.9E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Pfam PF00403 Heavy-metal-associated domain 144 200 3.5E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 SUPERFAMILY SSF55008 134 207 4.97E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 748 767 1.3E-19 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 567 1.3E-19 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 771 783 1.3E-19 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 705 1.3E-19 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 404 418 1.3E-19 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 273 850 4.0E-138 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Pfam PF00702 haloacid dehalogenase-like hydrolase 552 761 9.9E-31 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Gene3D G3DSA:3.40.1110.10 575 674 5.0E-6 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Gene3D G3DSA:2.70.150.10 317 453 6.0E-21 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PANTHER PTHR24093:SF50 125 852 5.3E-161 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 SUPERFAMILY SSF81665 460 547 3.92E-9 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 SUPERFAMILY SSF81653 361 452 1.83E-21 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 748 764 6.7E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 779 804 6.7E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Gene3D G3DSA:3.40.50.1000 675 816 2.3E-40 T 22-04-2016 IPR023214 HAD-like domain RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Gene3D G3DSA:3.40.50.1000 529 569 2.3E-40 T 22-04-2016 IPR023214 HAD-like domain RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 SUPERFAMILY SSF56784 608 847 1.24E-42 T 22-04-2016 IPR023214 HAD-like domain RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 SUPERFAMILY SSF56784 553 571 1.24E-42 T 22-04-2016 IPR023214 HAD-like domain RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 PANTHER PTHR24093 125 852 5.3E-161 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 327 832 3.3E-66 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 47 131 4.6E-18 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 555 561 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Gene3D G3DSA:3.30.70.100 137 205 1.1E-13 T 22-04-2016 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 291 850 7.1E-146 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS10235 56b349ca8fb047e2543d9a96764575ff 861 Pfam PF00122 E1-E2 ATPase 324 544 3.4E-52 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 PANTHER PTHR11451:SF31 1 635 0.0 T 22-04-2016 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Gene3D G3DSA:3.10.20.30 1 64 4.7E-23 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 SMART SM00863 169 218 1.0E-23 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 1.6E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 1.6E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 1.6E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 1.6E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 1.6E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 SUPERFAMILY SSF55681 242 525 2.49E-101 T 22-04-2016 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Pfam PF02824 TGS domain 3 61 1.1E-10 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 PANTHER PTHR11451 1 635 0.0 T 22-04-2016 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Gene3D G3DSA:3.30.980.10 66 129 6.6E-43 T 22-04-2016 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Gene3D G3DSA:3.30.980.10 187 223 6.6E-43 T 22-04-2016 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 528 3.2E-43 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Gene3D G3DSA:3.30.54.20 130 186 4.2E-23 T 22-04-2016 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.343 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Gene3D G3DSA:3.30.930.10 241 529 1.2E-121 T 22-04-2016 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 218 1.3E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 SUPERFAMILY SSF52954 529 632 2.11E-30 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 6.1E-220 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 SUPERFAMILY SSF55186 64 240 4.06E-68 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 SUPERFAMILY SSF81271 2 61 3.27E-16 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Gene3D G3DSA:3.40.50.800 530 633 3.9E-33 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS05840 a8db6d473bf2053b8cb03b1d8de1713e 635 Pfam PF03129 Anticodon binding domain 540 629 1.3E-19 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS04110 a64dbf34aa530212acba752316244ea8 205 PANTHER PTHR30212 6 205 7.2E-79 T 22-04-2016 RMET_RS04110 a64dbf34aa530212acba752316244ea8 205 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 11 205 4.9E-81 T 22-04-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent RMET_RS04110 a64dbf34aa530212acba752316244ea8 205 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 31 123 1.1E-14 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RMET_RS04110 a64dbf34aa530212acba752316244ea8 205 SUPERFAMILY SSF50475 23 170 2.27E-19 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS04110 a64dbf34aa530212acba752316244ea8 205 PANTHER PTHR30212:SF4 6 205 7.2E-79 T 22-04-2016 RMET_RS04110 a64dbf34aa530212acba752316244ea8 205 Gene3D G3DSA:2.30.110.10 27 148 3.9E-22 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 Gene3D G3DSA:1.20.5.550 88 139 8.0E-22 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 PIRSF PIRSF000197 75 1320 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 PANTHER PTHR11699 664 1114 4.6E-174 T 22-04-2016 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 612 1114 5.7E-244 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 Gene3D G3DSA:3.40.309.10 901 1092 1.6E-45 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 Gene3D G3DSA:3.40.605.10 656 900 6.1E-66 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 SUPERFAMILY SSF53720 636 1113 7.59E-129 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 PANTHER PTHR11699:SF18 664 1114 4.6E-174 T 22-04-2016 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 SUPERFAMILY SSF81935 89 262 1.96E-65 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 Pfam PF00171 Aldehyde dehydrogenase family 663 1112 1.9E-114 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 913 924 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 Pfam PF01619 Proline dehydrogenase 271 570 5.9E-98 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 SUPERFAMILY SSF47598 3 45 2.45E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 Gene3D G3DSA:1.10.2060.10 145 261 4.9E-53 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 Gene3D G3DSA:3.20.20.220 262 618 1.5E-118 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 SUPERFAMILY SSF51730 263 618 2.9E-121 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RMET_RS17535 b94d7c9d16a7734e19d7e59643edf7d8 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 1.4E-45 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RMET_RS03205 a081c57efeadb0472c758191d0ca9068 606 PANTHER PTHR35370 7 606 1.4E-208 T 22-04-2016 RMET_RS03205 a081c57efeadb0472c758191d0ca9068 606 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 11 602 8.8E-191 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like RMET_RS03205 a081c57efeadb0472c758191d0ca9068 606 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 11 603 9.0E-183 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like RMET_RS03205 a081c57efeadb0472c758191d0ca9068 606 PIRSF PIRSF028304 6 606 8.6E-156 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like RMET_RS03205 a081c57efeadb0472c758191d0ca9068 606 PANTHER PTHR35370:SF4 7 606 1.4E-208 T 22-04-2016 RMET_RS00620 b0d438dee9a3b499cd0dfbf12f0f07d9 309 Pfam PF00753 Metallo-beta-lactamase superfamily 22 206 7.9E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00620 b0d438dee9a3b499cd0dfbf12f0f07d9 309 PANTHER PTHR11935 1 218 2.0E-34 T 22-04-2016 RMET_RS00620 b0d438dee9a3b499cd0dfbf12f0f07d9 309 Gene3D G3DSA:3.60.15.10 9 227 2.1E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00620 b0d438dee9a3b499cd0dfbf12f0f07d9 309 SUPERFAMILY SSF56281 17 227 1.76E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00620 b0d438dee9a3b499cd0dfbf12f0f07d9 309 SMART SM00849 21 206 7.2E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 4.3E-44 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 385 46.795 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 SUPERFAMILY SSF69055 296 386 6.28E-32 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 PANTHER PTHR30525 1 386 3.5E-217 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 232 6.3E-38 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 383 8.4E-153 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 Gene3D G3DSA:3.40.50.720 1 150 1.2E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 SUPERFAMILY SSF55347 126 267 9.81E-61 T 22-04-2016 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 SUPERFAMILY SSF51735 2 150 1.71E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 Pfam PF13288 DXP reductoisomerase C-terminal domain 264 380 1.3E-42 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 Gene3D G3DSA:1.10.1740.10 306 387 1.2E-31 T 22-04-2016 RMET_RS07260 4b25e7807c99f41b5487139181955c8b 392 PIRSF PIRSF006205 1 390 7.0E-152 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 Gene3D G3DSA:1.20.1560.10 35 361 4.5E-19 T 22-04-2016 RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 Pfam PF06472 ABC transporter transmembrane region 2 27 315 9.6E-65 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 PANTHER PTHR11384 27 603 3.7E-199 T 22-04-2016 RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 SMART SM00382 437 609 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 SUPERFAMILY SSF52540 418 602 7.91E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 PANTHER PTHR11384:SF3 27 603 3.7E-199 T 22-04-2016 RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 SUPERFAMILY SSF90123 32 362 4.05E-28 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 ProSitePatterns PS00211 ABC transporters family signature. 534 548 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 Gene3D G3DSA:3.40.50.300 423 600 2.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01870 90235e02e22791f10d1a56a2dc3783b0 636 Pfam PF00005 ABC transporter 431 562 2.3E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS11450 20aecddc58ab10a3b0957a4145d6e5d9 135 PANTHER PTHR34309 1 133 2.4E-52 T 22-04-2016 RMET_RS11450 20aecddc58ab10a3b0957a4145d6e5d9 135 Pfam PF03928 Haem-degrading 7 130 7.9E-32 T 22-04-2016 IPR005624 Haem-degrading RMET_RS11450 20aecddc58ab10a3b0957a4145d6e5d9 135 PANTHER PTHR34309:SF4 1 133 2.4E-52 T 22-04-2016 RMET_RS11450 20aecddc58ab10a3b0957a4145d6e5d9 135 SUPERFAMILY SSF143744 2 133 1.44E-37 T 22-04-2016 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 SUPERFAMILY SSF47203 217 363 2.09E-34 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 206 3.8E-12 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 216 348 6.0E-26 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 Gene3D G3DSA:1.10.540.10 1 104 1.2E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 Gene3D G3DSA:1.20.140.10 203 355 6.7E-33 T 22-04-2016 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 Gene3D G3DSA:2.40.110.10 118 202 7.4E-11 T 22-04-2016 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 SUPERFAMILY SSF56645 1 208 4.84E-36 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 PANTHER PTHR10909 1 356 2.0E-67 T 22-04-2016 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 101 1.3E-10 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04755 8c4dcfb43ab4014fabe19d16115c02a9 372 PANTHER PTHR10909:SF341 1 356 2.0E-67 T 22-04-2016 RMET_RS05820 d7f65ca21d750babfb4a27ba7038dd9b 293 SUPERFAMILY SSF53474 19 283 3.46E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05820 d7f65ca21d750babfb4a27ba7038dd9b 293 Pfam PF12697 Alpha/beta hydrolase family 35 283 8.1E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05820 d7f65ca21d750babfb4a27ba7038dd9b 293 Gene3D G3DSA:3.40.50.1820 18 290 1.9E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05820 d7f65ca21d750babfb4a27ba7038dd9b 293 PANTHER PTHR10992 166 293 9.2E-31 T 22-04-2016 RMET_RS05820 d7f65ca21d750babfb4a27ba7038dd9b 293 PANTHER PTHR10992 20 150 9.2E-31 T 22-04-2016 RMET_RS05820 d7f65ca21d750babfb4a27ba7038dd9b 293 PANTHER PTHR10992:SF771 166 293 9.2E-31 T 22-04-2016 RMET_RS05820 d7f65ca21d750babfb4a27ba7038dd9b 293 PANTHER PTHR10992:SF771 20 150 9.2E-31 T 22-04-2016 RMET_RS17120 2675779b7b06222337683f396865e7ea 473 TIGRFAM TIGR03471 HpnJ: hopanoid biosynthesis associated radical SAM protein HpnJ 1 472 1.9E-256 T 22-04-2016 IPR017834 Hopanoid biosynthesis associated radical SAM protein HpnJ RMET_RS17120 2675779b7b06222337683f396865e7ea 473 Pfam PF04055 Radical SAM superfamily 202 361 1.4E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS17120 2675779b7b06222337683f396865e7ea 473 SMART SM00729 196 402 1.4E-31 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS17120 2675779b7b06222337683f396865e7ea 473 PANTHER PTHR11918 46 386 1.4E-61 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RMET_RS17120 2675779b7b06222337683f396865e7ea 473 PANTHER PTHR11918:SF64 46 386 1.4E-61 T 22-04-2016 RMET_RS17120 2675779b7b06222337683f396865e7ea 473 SUPERFAMILY SSF102114 165 410 3.92E-45 T 22-04-2016 RMET_RS17120 2675779b7b06222337683f396865e7ea 473 Gene3D G3DSA:3.80.30.20 195 389 2.1E-44 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RMET_RS09915 cc93bb3853432c28ec4f67720fb415ee 99 Gene3D G3DSA:2.40.50.140 2 98 1.4E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS09915 cc93bb3853432c28ec4f67720fb415ee 99 SUPERFAMILY SSF50249 1 97 5.31E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS09915 cc93bb3853432c28ec4f67720fb415ee 99 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 94 3.3E-29 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RMET_RS00645 73bb60556e03557999285a6e5e231bf3 139 SUPERFAMILY SSF109635 5 98 2.62E-31 T 22-04-2016 RMET_RS00645 73bb60556e03557999285a6e5e231bf3 139 SUPERFAMILY SSF57716 99 137 3.28E-8 T 22-04-2016 RMET_RS00645 73bb60556e03557999285a6e5e231bf3 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 128 2.9E-44 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RMET_RS00645 73bb60556e03557999285a6e5e231bf3 139 PANTHER PTHR33823:SF2 1 135 1.4E-37 T 22-04-2016 RMET_RS00645 73bb60556e03557999285a6e5e231bf3 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 131 1.0E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RMET_RS00645 73bb60556e03557999285a6e5e231bf3 139 PANTHER PTHR33823 1 135 1.4E-37 T 22-04-2016 RMET_RS00645 73bb60556e03557999285a6e5e231bf3 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 138 28.196 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 Gene3D G3DSA:3.30.160.40 238 323 4.7E-24 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 PIRSF PIRSF001438 2 330 1.8E-116 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 242 314 3.2E-16 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 PRINTS PR00151 Porphobilinogen deaminase signature 61 81 9.7E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 PRINTS PR00151 Porphobilinogen deaminase signature 92 111 9.7E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 PRINTS PR00151 Porphobilinogen deaminase signature 246 263 9.7E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 PRINTS PR00151 Porphobilinogen deaminase signature 140 157 9.7E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 PRINTS PR00151 Porphobilinogen deaminase signature 159 176 9.7E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 PANTHER PTHR11557:SF0 1 325 5.7E-148 T 22-04-2016 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 22 228 3.4E-76 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 22 316 5.0E-103 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 247 263 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 Gene3D G3DSA:3.40.190.10 127 215 2.7E-37 T 22-04-2016 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 Gene3D G3DSA:3.40.190.10 20 126 3.8E-47 T 22-04-2016 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 SUPERFAMILY SSF54782 236 326 9.15E-23 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 21 316 37.504 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 PANTHER PTHR11557 1 325 5.7E-148 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13795 86c9a8bb84bf66d0bed073f61c47f47d 334 SUPERFAMILY SSF53850 21 235 1.3E-80 T 22-04-2016 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 2.2E-29 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 SUPERFAMILY SSF47203 228 381 1.51E-53 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 Gene3D G3DSA:1.20.140.10 218 383 7.9E-63 T 22-04-2016 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 Gene3D G3DSA:1.10.540.10 9 118 1.4E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 PANTHER PTHR10909:SF305 10 382 1.8E-141 T 22-04-2016 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 SUPERFAMILY SSF56645 7 241 1.44E-78 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 PANTHER PTHR10909 10 382 1.8E-141 T 22-04-2016 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 116 5.4E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 1.2E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS09090 c21c4fc59d28f22426a7960ce38be719 386 Gene3D G3DSA:2.40.110.10 121 217 1.5E-42 T 22-04-2016 RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 SUPERFAMILY SSF47384 266 347 3.73E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 SMART SM00388 283 348 3.0E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 SMART SM00387 404 555 2.8E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 Pfam PF08521 Two-component sensor kinase N-terminal 51 206 1.5E-28 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 Gene3D G3DSA:3.30.565.10 358 521 4.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 5.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 503 5.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 PANTHER PTHR24423:SF474 221 511 7.7E-52 T 22-04-2016 RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 348 6.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 517 7.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 Gene3D G3DSA:1.10.287.130 275 344 1.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 SUPERFAMILY SSF55874 337 511 3.14E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17765 66467c4bd7a777fee15126223adfe08a 560 PANTHER PTHR24423 221 511 7.7E-52 T 22-04-2016 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 Gene3D G3DSA:1.20.58.410 1 54 1.1E-7 T 22-04-2016 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 Pfam PF00472 RF-1 domain 168 275 1.7E-39 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 SMART SM00937 23 133 6.1E-54 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 301 5.4E-141 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 183 199 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 PANTHER PTHR11075 1 301 8.6E-145 T 22-04-2016 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 Gene3D G3DSA:3.30.160.20 166 244 3.3E-38 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 Pfam PF03462 PCRF domain 4 158 5.4E-45 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 SUPERFAMILY SSF75620 2 300 1.44E-122 T 22-04-2016 RMET_RS05210 2df3c98ffc82d38eb64fb0b516a481c0 303 PANTHER PTHR11075:SF6 1 301 8.6E-145 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 Gene3D G3DSA:3.90.1150.10 11 54 7.6E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 Gene3D G3DSA:3.90.1150.10 299 393 7.6E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 SUPERFAMILY SSF53383 7 394 1.5E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 Gene3D G3DSA:3.40.640.10 56 294 9.0E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 PANTHER PTHR11986 10 395 6.4E-174 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 392 40.916 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 PANTHER PTHR11986:SF88 10 395 6.4E-174 T 22-04-2016 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 PIRSF PIRSF000521 19 394 6.5E-44 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS14350 aaa4c4939f74d0dbbb1100a50b1d2b13 395 Pfam PF00202 Aminotransferase class-III 19 390 1.3E-101 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 46 1.3E-18 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 Pfam PF02779 Transketolase, pyrimidine binding domain 596 793 1.1E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 PANTHER PTHR23152:SF4 1 949 0.0 T 22-04-2016 RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 PANTHER PTHR23152 1 949 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 Gene3D G3DSA:3.40.50.970 164 520 4.6E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 SMART SM00861 597 794 2.8E-61 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 SUPERFAMILY SSF52518 123 549 7.36E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 Gene3D G3DSA:3.40.50.970 600 802 4.6E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 PIRSF PIRSF000157 1 942 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 799 940 1.6E-54 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 939 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 Pfam PF00676 Dehydrogenase E1 component 216 518 2.3E-46 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RMET_RS10255 cdc7eeb62f02543e5878ee7373a55760 950 SUPERFAMILY SSF52518 580 801 1.26E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 PANTHER PTHR11472:SF37 36 703 2.0E-173 T 22-04-2016 RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 PANTHER PTHR11472 36 703 2.0E-173 T 22-04-2016 RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 SUPERFAMILY SSF52540 526 624 1.67E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 SUPERFAMILY SSF52540 655 672 1.67E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 SUPERFAMILY SSF52540 230 272 1.67E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 Gene3D G3DSA:3.40.50.300 467 477 9.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 Gene3D G3DSA:3.40.50.300 232 297 9.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 Gene3D G3DSA:3.40.50.300 59 161 9.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 Pfam PF13307 Helicase C-terminal domain 536 698 2.0E-31 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 Pfam PF00270 DEAD/DEAH box helicase 74 123 3.9E-4 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 Gene3D G3DSA:3.40.50.300 526 680 1.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 SUPERFAMILY SSF52540 44 152 1.92E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 SUPERFAMILY SSF52540 229 286 1.92E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 SUPERFAMILY SSF52540 644 679 1.92E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06235 3ceb4256e8e22cc5d6a80ea44362108d 730 SMART SM00491 558 685 3.8E-40 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RMET_RS03180 7f2d82efbc9355c3bd965d4a0b38ca8d 410 SUPERFAMILY SSF81901 41 214 4.38E-22 T 22-04-2016 RMET_RS03180 7f2d82efbc9355c3bd965d4a0b38ca8d 410 Pfam PF08238 Sel1 repeat 104 139 3.9E-7 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03180 7f2d82efbc9355c3bd965d4a0b38ca8d 410 Pfam PF08238 Sel1 repeat 34 66 51.0 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03180 7f2d82efbc9355c3bd965d4a0b38ca8d 410 SMART SM00671 104 139 6.4E-7 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03180 7f2d82efbc9355c3bd965d4a0b38ca8d 410 SMART SM00671 32 66 9.0 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03180 7f2d82efbc9355c3bd965d4a0b38ca8d 410 PANTHER PTHR11102 104 197 8.8E-15 T 22-04-2016 RMET_RS03180 7f2d82efbc9355c3bd965d4a0b38ca8d 410 PANTHER PTHR11102 32 66 8.8E-15 T 22-04-2016 RMET_RS03180 7f2d82efbc9355c3bd965d4a0b38ca8d 410 Gene3D G3DSA:1.25.40.10 29 207 8.3E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.6E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 SMART SM01374 1 122 1.7E-83 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 6.5E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.721 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 Gene3D G3DSA:2.40.150.20 1 122 5.5E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 PANTHER PTHR11761 1 122 1.2E-71 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 SUPERFAMILY SSF50193 1 122 7.46E-50 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RMET_RS16585 a0cadd25ea2cfa43db25c75ec75799fd 122 PANTHER PTHR11761:SF3 1 122 1.2E-71 T 22-04-2016 RMET_RS00765 845438cf6bec386e38dd0f0c2f61c59a 225 Gene3D G3DSA:3.40.50.2020 13 224 8.1E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS00765 845438cf6bec386e38dd0f0c2f61c59a 225 PANTHER PTHR19278 14 225 1.1E-94 T 22-04-2016 RMET_RS00765 845438cf6bec386e38dd0f0c2f61c59a 225 SUPERFAMILY SSF53271 10 203 5.39E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS00765 845438cf6bec386e38dd0f0c2f61c59a 225 Pfam PF00156 Phosphoribosyl transferase domain 45 164 7.6E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RMET_RS00765 845438cf6bec386e38dd0f0c2f61c59a 225 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 17 197 1.1E-55 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS00765 845438cf6bec386e38dd0f0c2f61c59a 225 PANTHER PTHR19278:SF36 14 225 1.1E-94 T 22-04-2016 RMET_RS00765 845438cf6bec386e38dd0f0c2f61c59a 225 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 225 32.327 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 SUPERFAMILY SSF53187 3 186 4.65E-62 T 22-04-2016 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 SUPERFAMILY SSF53187 300 381 4.65E-62 T 22-04-2016 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 Pfam PF01546 Peptidase family M20/M25/M40 70 379 4.6E-45 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 69 78 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 381 8.2E-158 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 Pfam PF07687 Peptidase dimerisation domain 183 290 9.9E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 Gene3D G3DSA:3.30.70.360 196 296 5.5E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 Gene3D G3DSA:3.40.630.10 2 195 1.5E-73 T 22-04-2016 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 Gene3D G3DSA:3.40.630.10 324 382 1.5E-73 T 22-04-2016 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 383 51.581 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 PANTHER PTHR11014 2 383 6.0E-88 T 22-04-2016 RMET_RS07155 9285bd914eed75bdb2da2e430f64576f 383 SUPERFAMILY SSF55031 187 296 1.26E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS06360 24ae295cde1cb9a537c4ee1959e15e65 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RMET_RS06360 24ae295cde1cb9a537c4ee1959e15e65 416 Pfam PF00872 Transposase, Mutator family 37 391 8.2E-119 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RMET_RS06360 24ae295cde1cb9a537c4ee1959e15e65 416 PANTHER PTHR33217 42 412 9.9E-155 T 22-04-2016 RMET_RS02430 24ae295cde1cb9a537c4ee1959e15e65 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RMET_RS02430 24ae295cde1cb9a537c4ee1959e15e65 416 Pfam PF00872 Transposase, Mutator family 37 391 8.2E-119 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RMET_RS02430 24ae295cde1cb9a537c4ee1959e15e65 416 PANTHER PTHR33217 42 412 9.9E-155 T 22-04-2016 RMET_RS11390 24ae295cde1cb9a537c4ee1959e15e65 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RMET_RS11390 24ae295cde1cb9a537c4ee1959e15e65 416 Pfam PF00872 Transposase, Mutator family 37 391 8.2E-119 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RMET_RS11390 24ae295cde1cb9a537c4ee1959e15e65 416 PANTHER PTHR33217 42 412 9.9E-155 T 22-04-2016 RMET_RS07570 24ae295cde1cb9a537c4ee1959e15e65 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RMET_RS07570 24ae295cde1cb9a537c4ee1959e15e65 416 Pfam PF00872 Transposase, Mutator family 37 391 8.2E-119 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RMET_RS07570 24ae295cde1cb9a537c4ee1959e15e65 416 PANTHER PTHR33217 42 412 9.9E-155 T 22-04-2016 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 SUPERFAMILY SSF51690 118 386 1.75E-90 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 PANTHER PTHR11098:SF16 2 389 6.8E-188 T 22-04-2016 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 388 3.1E-148 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 SUPERFAMILY SSF54675 1 137 3.14E-46 T 22-04-2016 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 Gene3D G3DSA:3.20.140.10 1 372 1.3E-147 T 22-04-2016 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 390 47.303 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 PANTHER PTHR11098 2 389 6.8E-188 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 PIRSF PIRSF000484 1 379 1.7E-69 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RMET_RS12285 d89fec46ab3d289f7aafc19aa24d7f7d 392 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 164 388 1.6E-73 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 Pfam PF01018 GTP1/OBG 3 158 4.1E-59 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 6.5E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 6.5E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 6.5E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 6.5E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 1.0E-143 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.79 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 PANTHER PTHR11702:SF3 1 348 4.4E-161 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 PANTHER PTHR11702 1 348 4.4E-161 T 22-04-2016 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 Gene3D G3DSA:2.70.210.12 2 155 2.9E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 Pfam PF01926 50S ribosome-binding GTPase 161 285 5.3E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 SUPERFAMILY SSF82051 2 158 4.32E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 SUPERFAMILY SSF52540 152 338 8.28E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 PIRSF PIRSF002401 1 363 2.9E-136 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RMET_RS15540 bb21d3f43ff0cb9c3181669f7f8a44f4 365 Gene3D G3DSA:3.40.50.300 156 337 3.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06205 96f1a5cbc5c2debf031e0131bb01332a 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 250 5.3E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS06205 96f1a5cbc5c2debf031e0131bb01332a 255 PANTHER PTHR24220 11 253 1.7E-90 T 22-04-2016 RMET_RS06205 96f1a5cbc5c2debf031e0131bb01332a 255 Pfam PF00005 ABC transporter 26 180 2.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS06205 96f1a5cbc5c2debf031e0131bb01332a 255 SMART SM00382 34 228 0.0017 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06205 96f1a5cbc5c2debf031e0131bb01332a 255 PANTHER PTHR24220:SF491 11 253 1.7E-90 T 22-04-2016 RMET_RS06205 96f1a5cbc5c2debf031e0131bb01332a 255 Gene3D G3DSA:3.40.50.300 7 249 1.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06205 96f1a5cbc5c2debf031e0131bb01332a 255 SUPERFAMILY SSF52540 8 249 2.71E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 PIRSF PIRSF000124 1 452 9.9E-147 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 PANTHER PTHR11374 1 457 1.0E-242 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 3.2E-36 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 4.1E-65 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 433 2.0E-129 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 SMART SM00984 325 437 4.8E-49 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 PANTHER PTHR11374:SF18 1 457 1.0E-242 T 22-04-2016 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 PIRSF PIRSF500134 1 455 1.1E-184 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 SUPERFAMILY SSF51735 1 199 1.78E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 Gene3D G3DSA:3.40.50.720 1 211 1.1E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 436 5.1E-29 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 Gene3D G3DSA:3.40.50.720 240 455 1.4E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 SUPERFAMILY SSF48179 209 306 2.21E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 SUPERFAMILY SSF52413 310 447 2.09E-39 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RMET_RS03650 9e22ed00891c25956f157d98ca0f72af 457 Gene3D G3DSA:1.20.5.100 212 239 5.5E-17 T 22-04-2016 RMET_RS13150 7c055cb606c2e0ec28599b8a728a52ea 294 Gene3D G3DSA:1.10.600.10 3 287 4.9E-92 T 22-04-2016 IPR008949 Isoprenoid synthase domain RMET_RS13150 7c055cb606c2e0ec28599b8a728a52ea 294 SUPERFAMILY SSF48576 3 284 4.75E-86 T 22-04-2016 IPR008949 Isoprenoid synthase domain RMET_RS13150 7c055cb606c2e0ec28599b8a728a52ea 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RMET_RS13150 7c055cb606c2e0ec28599b8a728a52ea 294 PANTHER PTHR12001:SF23 3 294 3.5E-105 T 22-04-2016 RMET_RS13150 7c055cb606c2e0ec28599b8a728a52ea 294 PANTHER PTHR12001 3 294 3.5E-105 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RMET_RS13150 7c055cb606c2e0ec28599b8a728a52ea 294 Pfam PF00348 Polyprenyl synthetase 32 259 5.6E-55 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RMET_RS13150 7c055cb606c2e0ec28599b8a728a52ea 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RMET_RS07795 958ee865b975721071c065b83491c1e9 154 SUPERFAMILY SSF47598 4 42 3.22E-6 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RMET_RS07795 958ee865b975721071c065b83491c1e9 154 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 41 7.0E-5 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RMET_RS07795 958ee865b975721071c065b83491c1e9 154 Gene3D G3DSA:1.10.1220.10 6 38 1.2E-5 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RMET_RS06755 958ee865b975721071c065b83491c1e9 154 SUPERFAMILY SSF47598 4 42 3.22E-6 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RMET_RS06755 958ee865b975721071c065b83491c1e9 154 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 41 7.0E-5 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RMET_RS06755 958ee865b975721071c065b83491c1e9 154 Gene3D G3DSA:1.10.1220.10 6 38 1.2E-5 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 Pfam PF00873 AcrB/AcrD/AcrF family 4 1012 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 Gene3D G3DSA:1.10.3850.10 797 1014 1.1E-52 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 Gene3D G3DSA:3.30.2090.10 709 794 7.0E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82693 136 182 1.46E-23 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82693 268 324 1.46E-23 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 Gene3D G3DSA:3.30.70.1430 40 142 3.3E-30 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PANTHER PTHR32063 1 1026 0.0 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82693 556 652 3.66E-14 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82866 290 491 5.1E-48 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.3E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82866 815 1013 7.85E-42 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82693 40 133 8.63E-23 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82714 709 790 2.75E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 Gene3D G3DSA:3.30.70.1430 559 642 1.6E-8 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82693 792 841 1.05E-12 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82693 666 705 1.05E-12 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 Gene3D G3DSA:1.20.1640.10 285 496 2.5E-57 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 SUPERFAMILY SSF82714 183 264 1.7E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 PANTHER PTHR32063:SF21 1 1026 0.0 T 22-04-2016 RMET_RS02595 5819884b3371bc0c2c5e95903bbb7582 1051 Gene3D G3DSA:3.30.2090.10 183 263 6.3E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS16070 ec000bc9689a688f0eb724b43974e4ce 204 PANTHER PTHR30108 7 197 7.9E-83 T 22-04-2016 RMET_RS16070 ec000bc9689a688f0eb724b43974e4ce 204 Gene3D G3DSA:3.40.50.1950 11 197 3.1E-78 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RMET_RS16070 ec000bc9689a688f0eb724b43974e4ce 204 SUPERFAMILY SSF52507 11 185 3.01E-63 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RMET_RS16070 ec000bc9689a688f0eb724b43974e4ce 204 PANTHER PTHR30108:SF10 7 197 7.9E-83 T 22-04-2016 RMET_RS16070 ec000bc9689a688f0eb724b43974e4ce 204 Pfam PF02441 Flavoprotein 11 135 1.8E-27 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RMET_RS16070 ec000bc9689a688f0eb724b43974e4ce 204 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 10 197 37.208 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RMET_RS16070 ec000bc9689a688f0eb724b43974e4ce 204 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 11 184 2.5E-71 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RMET_RS19335 2c7eaeea4a7d87c918bd977a37a4a683 156 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 2 156 3.9E-53 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RMET_RS19335 2c7eaeea4a7d87c918bd977a37a4a683 156 SUPERFAMILY SSF51621 1 156 1.4E-45 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS19335 2c7eaeea4a7d87c918bd977a37a4a683 156 Gene3D G3DSA:3.20.20.60 1 156 3.8E-44 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS19335 2c7eaeea4a7d87c918bd977a37a4a683 156 PANTHER PTHR22931 1 156 1.3E-44 T 22-04-2016 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 PANTHER PTHR11693 1 291 5.4E-121 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 291 36.019 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 Gene3D G3DSA:1.10.287.80 240 286 9.9E-29 T 22-04-2016 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 Pfam PF00231 ATP synthase 4 290 2.8E-90 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 291 4.9E-104 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 SUPERFAMILY SSF52943 2 291 1.96E-95 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 Gene3D G3DSA:3.40.1380.10 64 191 2.0E-42 T 22-04-2016 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 1.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 1.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 Gene3D G3DSA:1.10.287.80 206 239 1.5E-41 T 22-04-2016 RMET_RS17565 a6cf3929662ce01297f4d912be177172 291 Gene3D G3DSA:1.10.287.80 19 60 1.5E-41 T 22-04-2016 RMET_RS14955 5d5232d1b47443e103ae28bf3bdde749 247 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 15 245 4.7E-53 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS14955 5d5232d1b47443e103ae28bf3bdde749 247 Pfam PF04452 RNA methyltransferase 18 241 2.2E-68 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS14955 5d5232d1b47443e103ae28bf3bdde749 247 PANTHER PTHR30027:SF3 1 245 3.2E-73 T 22-04-2016 RMET_RS14955 5d5232d1b47443e103ae28bf3bdde749 247 PIRSF PIRSF015601 1 246 2.1E-56 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS14955 5d5232d1b47443e103ae28bf3bdde749 247 SUPERFAMILY SSF75217 72 245 2.01E-51 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RMET_RS14955 5d5232d1b47443e103ae28bf3bdde749 247 Gene3D G3DSA:3.40.1280.10 3 245 6.7E-81 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMET_RS14955 5d5232d1b47443e103ae28bf3bdde749 247 PANTHER PTHR30027 1 245 3.2E-73 T 22-04-2016 RMET_RS14955 5d5232d1b47443e103ae28bf3bdde749 247 SUPERFAMILY SSF88697 2 63 6.46E-13 T 22-04-2016 IPR015947 PUA-like domain RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 SUPERFAMILY SSF48452 111 148 2.37E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 SUPERFAMILY SSF48452 202 245 2.37E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 Gene3D G3DSA:1.25.40.10 107 191 6.4E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 104 8.2E-32 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 Pfam PF14561 Tetratricopeptide repeat 195 279 2.4E-26 T 22-04-2016 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 PANTHER PTHR10438 223 244 3.8E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 PANTHER PTHR10438 3 108 3.8E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 Pfam PF00085 Thioredoxin 4 104 1.2E-25 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 Gene3D G3DSA:3.40.30.10 3 106 3.1E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 SUPERFAMILY SSF52833 3 108 1.08E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 PANTHER PTHR10438:SF282 223 244 3.8E-38 T 22-04-2016 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 PANTHER PTHR10438:SF282 3 108 3.8E-38 T 22-04-2016 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 Gene3D G3DSA:1.25.40.10 195 279 1.9E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 PRINTS PR00421 Thioredoxin family signature 70 81 1.0E-5 T 22-04-2016 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 PRINTS PR00421 Thioredoxin family signature 30 39 1.0E-5 T 22-04-2016 RMET_RS13250 9ae28d92e76c4cd6a227e346d695c20e 280 PRINTS PR00421 Thioredoxin family signature 22 30 1.0E-5 T 22-04-2016 RMET_RS16180 71f13cd13b03c94e729a64e33bc12118 165 SUPERFAMILY SSF101738 2 116 7.85E-47 T 22-04-2016 IPR007481 Stringent starvation protein B RMET_RS16180 71f13cd13b03c94e729a64e33bc12118 165 PIRSF PIRSF005276 1 165 5.3E-52 T 22-04-2016 IPR007481 Stringent starvation protein B RMET_RS16180 71f13cd13b03c94e729a64e33bc12118 165 PANTHER PTHR37486:SF1 1 165 2.6E-48 T 22-04-2016 RMET_RS16180 71f13cd13b03c94e729a64e33bc12118 165 Gene3D G3DSA:2.30.30.220 2 104 7.9E-48 T 22-04-2016 IPR007481 Stringent starvation protein B RMET_RS16180 71f13cd13b03c94e729a64e33bc12118 165 PANTHER PTHR37486 1 165 2.6E-48 T 22-04-2016 RMET_RS16180 71f13cd13b03c94e729a64e33bc12118 165 Pfam PF04386 Stringent starvation protein B 5 165 1.8E-37 T 22-04-2016 IPR007481 Stringent starvation protein B RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 Gene3D G3DSA:2.60.120.10 42 76 2.5E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 SMART SM00342 224 306 1.7E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 Pfam PF12852 Cupin 2 193 7.0E-29 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 SUPERFAMILY SSF51182 30 77 4.11E-5 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 SUPERFAMILY SSF46689 207 254 3.23E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 PANTHER PTHR11019 41 314 1.1E-46 T 22-04-2016 RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 Pfam PF12833 Helix-turn-helix domain 230 308 6.6E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 Gene3D G3DSA:1.10.10.60 207 261 2.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 SUPERFAMILY SSF46689 259 311 3.36E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 Gene3D G3DSA:1.10.10.60 262 310 5.2E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08070 17ce5d2ac0756bd68aaaeda279bab275 316 PANTHER PTHR11019:SF77 41 314 1.1E-46 T 22-04-2016 RMET_RS13980 73824fdb27a5b2584d3d22560cddd535 356 Gene3D G3DSA:3.40.50.10210 77 332 1.1E-111 T 22-04-2016 RMET_RS13980 73824fdb27a5b2584d3d22560cddd535 356 PANTHER PTHR21712 14 352 3.0E-118 T 22-04-2016 RMET_RS13980 73824fdb27a5b2584d3d22560cddd535 356 Gene3D G3DSA:1.10.1610.10 10 76 2.5E-32 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RMET_RS13980 73824fdb27a5b2584d3d22560cddd535 356 SUPERFAMILY SSF52733 11 352 7.46E-122 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RMET_RS13980 73824fdb27a5b2584d3d22560cddd535 356 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 19 350 6.2E-139 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RMET_RS13980 73824fdb27a5b2584d3d22560cddd535 356 PANTHER PTHR21712:SF4 14 352 3.0E-118 T 22-04-2016 RMET_RS13980 73824fdb27a5b2584d3d22560cddd535 356 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 17 352 36.922 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RMET_RS13980 73824fdb27a5b2584d3d22560cddd535 356 Pfam PF02277 Phosphoribosyltransferase 15 350 1.8E-135 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RMET_RS15505 920ccef760373bd624a368d30aa87dbd 473 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 RMET_RS15505 920ccef760373bd624a368d30aa87dbd 473 SUPERFAMILY SSF50494 48 272 6.19E-14 T 22-04-2016 IPR009003 Peptidase S1, PA clan RMET_RS15505 920ccef760373bd624a368d30aa87dbd 473 Gene3D G3DSA:2.40.10.10 65 176 3.3E-5 T 22-04-2016 RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 PANTHER PTHR10362:SF7 1 504 1.6E-228 T 22-04-2016 RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 Gene3D G3DSA:1.10.275.10 3 204 6.7E-70 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 Pfam PF00221 Aromatic amino acid lyase 19 476 3.2E-180 T 22-04-2016 IPR001106 Aromatic amino acid lyase RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 PANTHER PTHR10362 1 504 1.6E-228 T 22-04-2016 RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 Gene3D G3DSA:1.20.200.10 205 503 5.3E-123 T 22-04-2016 RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 12 503 2.5E-203 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 SUPERFAMILY SSF48557 4 504 2.2E-186 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 10 510 42.82 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14315 ac2c93abf0f564580bd7db752296701b 522 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 146 161 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 SUPERFAMILY SSF52540 761 1019 8.22E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 SMART SM00487 549 732 1.3E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 Pfam PF00176 SNF2 family N-terminal domain 568 843 6.3E-53 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 Gene3D G3DSA:3.40.50.300 852 1000 4.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 SMART SM00490 882 964 3.6E-20 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 PANTHER PTHR10799 544 1011 1.3E-172 T 22-04-2016 RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 SUPERFAMILY SSF52540 540 760 2.66E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 Gene3D G3DSA:3.40.50.300 548 718 1.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02500 525ae01efa19a635b8787bc40e1fed15 1025 Pfam PF00271 Helicase conserved C-terminal domain 854 964 5.1E-17 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS02675 491f7e31e7c16e17a6007de76478866a 256 Pfam PF08241 Methyltransferase domain 49 144 1.2E-23 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RMET_RS02675 491f7e31e7c16e17a6007de76478866a 256 PANTHER PTHR10108 7 249 7.0E-77 T 22-04-2016 RMET_RS02675 491f7e31e7c16e17a6007de76478866a 256 PANTHER PTHR10108:SF835 7 249 7.0E-77 T 22-04-2016 RMET_RS02675 491f7e31e7c16e17a6007de76478866a 256 SUPERFAMILY SSF53335 26 241 3.56E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS02675 491f7e31e7c16e17a6007de76478866a 256 Gene3D G3DSA:3.40.50.150 34 240 4.6E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS09825 44fd473d33dbef88ea53c471c563264c 722 PIRSF PIRSF011409 2 722 0.0 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RMET_RS09825 44fd473d33dbef88ea53c471c563264c 722 Hamap MF_01906 D-(-)-3-hydroxybutyrate oligomer hydrolase. 9 722 34.799 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RMET_RS09825 44fd473d33dbef88ea53c471c563264c 722 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 35 722 0.0 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RMET_RS17600 32773331678fbe98839d097d615a8d92 297 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 31 209 2.5E-60 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RMET_RS17600 32773331678fbe98839d097d615a8d92 297 PANTHER PTHR33375 1 292 4.8E-93 T 22-04-2016 RMET_RS17600 32773331678fbe98839d097d615a8d92 297 PANTHER PTHR33375:SF1 1 292 4.8E-93 T 22-04-2016 RMET_RS17600 32773331678fbe98839d097d615a8d92 297 Pfam PF02195 ParB-like nuclease domain 37 125 1.3E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS17600 32773331678fbe98839d097d615a8d92 297 Gene3D G3DSA:3.90.1530.10 31 131 6.8E-40 T 22-04-2016 RMET_RS17600 32773331678fbe98839d097d615a8d92 297 SUPERFAMILY SSF109709 118 224 8.11E-34 T 22-04-2016 RMET_RS17600 32773331678fbe98839d097d615a8d92 297 SUPERFAMILY SSF110849 36 127 6.8E-29 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS17600 32773331678fbe98839d097d615a8d92 297 SMART SM00470 34 125 1.5E-35 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 PANTHER PTHR11712 3 409 4.9E-211 T 22-04-2016 RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 367 1.3E-33 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 7.6E-60 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 SMART SM00825 Beta-ketoacyl synthase 6 410 1.4E-15 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 408 5.1E-197 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 Gene3D G3DSA:3.40.47.10 3 257 3.6E-83 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 SUPERFAMILY SSF53901 4 252 1.54E-80 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 PIRSF PIRSF000447 1 410 4.6E-185 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 Gene3D G3DSA:3.40.47.10 263 409 2.3E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 SUPERFAMILY SSF53901 215 409 4.99E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12170 a6c3e1fb008f593a2d7a711cc1a8b49a 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site RMET_RS09685 5e20d15d05f45cb7a4ab17cc51c3cf72 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 439 1.1E-67 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RMET_RS09685 5e20d15d05f45cb7a4ab17cc51c3cf72 544 Gene3D G3DSA:3.10.105.10 315 514 4.1E-36 T 22-04-2016 RMET_RS09685 5e20d15d05f45cb7a4ab17cc51c3cf72 544 PIRSF PIRSF002741 27 538 6.4E-68 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RMET_RS09685 5e20d15d05f45cb7a4ab17cc51c3cf72 544 Gene3D G3DSA:3.40.190.10 212 314 8.7E-28 T 22-04-2016 RMET_RS09685 5e20d15d05f45cb7a4ab17cc51c3cf72 544 PANTHER PTHR30290 22 544 1.6E-254 T 22-04-2016 RMET_RS09685 5e20d15d05f45cb7a4ab17cc51c3cf72 544 PANTHER PTHR30290:SF22 22 544 1.6E-254 T 22-04-2016 RMET_RS09685 5e20d15d05f45cb7a4ab17cc51c3cf72 544 SUPERFAMILY SSF53850 21 543 3.17E-98 T 22-04-2016 RMET_RS09685 5e20d15d05f45cb7a4ab17cc51c3cf72 544 Gene3D G3DSA:3.90.76.10 54 211 1.7E-30 T 22-04-2016 RMET_RS15255 bc570873a38ae033621b6ee31ab7cf5e 378 PANTHER PTHR30547 134 366 2.3E-143 T 22-04-2016 RMET_RS15255 bc570873a38ae033621b6ee31ab7cf5e 378 PANTHER PTHR30547 8 114 2.3E-143 T 22-04-2016 RMET_RS15255 bc570873a38ae033621b6ee31ab7cf5e 378 Pfam PF06250 Protein of unknown function (DUF1016) 27 359 6.5E-111 T 22-04-2016 IPR009362 Protein of unknown function DUF1016 RMET_RS15255 bc570873a38ae033621b6ee31ab7cf5e 378 PANTHER PTHR30547:SF5 134 366 2.3E-143 T 22-04-2016 RMET_RS15255 bc570873a38ae033621b6ee31ab7cf5e 378 PANTHER PTHR30547:SF5 8 114 2.3E-143 T 22-04-2016 RMET_RS00250 895a9d87e18aa08b9f7431829108e9dd 356 PANTHER PTHR17630 140 326 2.4E-13 T 22-04-2016 RMET_RS00250 895a9d87e18aa08b9f7431829108e9dd 356 PANTHER PTHR17630 106 119 2.4E-13 T 22-04-2016 RMET_RS00250 895a9d87e18aa08b9f7431829108e9dd 356 Pfam PF01738 Dienelactone hydrolase family 143 313 1.5E-17 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RMET_RS00250 895a9d87e18aa08b9f7431829108e9dd 356 Gene3D G3DSA:3.40.50.1820 72 314 3.9E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00250 895a9d87e18aa08b9f7431829108e9dd 356 SUPERFAMILY SSF53474 73 316 9.7E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 SUPERFAMILY SSF52540 143 386 4.99E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 SMART SM00382 164 307 2.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 SUPERFAMILY SSF52172 19 188 1.66E-10 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 Gene3D G3DSA:1.10.8.60 317 392 1.2E-19 T 22-04-2016 RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 SUPERFAMILY SSF46689 356 444 1.43E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 Pfam PF02954 Bacterial regulatory protein, Fis family 402 442 7.1E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 Gene3D G3DSA:1.10.10.60 393 444 3.0E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 Gene3D G3DSA:3.40.50.300 142 316 4.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 PANTHER PTHR32071 91 455 2.2E-138 T 22-04-2016 RMET_RS03325 c732ecdb36a60f74cae4d8d0d6db59d7 458 Pfam PF00158 Sigma-54 interaction domain 144 310 2.3E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS09175 f40c4eb205934f892cee075ad661bfe0 147 Gene3D G3DSA:3.40.630.30 20 144 3.3E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS09175 f40c4eb205934f892cee075ad661bfe0 147 SUPERFAMILY SSF55729 13 146 8.68E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS09175 f40c4eb205934f892cee075ad661bfe0 147 PANTHER PTHR13355 17 147 2.2E-38 T 22-04-2016 RMET_RS09175 f40c4eb205934f892cee075ad661bfe0 147 PANTHER PTHR13355:SF8 17 147 2.2E-38 T 22-04-2016 RMET_RS09175 f40c4eb205934f892cee075ad661bfe0 147 Pfam PF13673 Acetyltransferase (GNAT) domain 29 145 4.1E-23 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS09125 e22fcb1131b419aa4140c55ca13c13ed 345 SUPERFAMILY SSF46565 2 68 1.57E-19 T 22-04-2016 IPR001623 DnaJ domain RMET_RS09125 e22fcb1131b419aa4140c55ca13c13ed 345 PRINTS PR00625 DnaJ domain signature 40 60 4.1E-11 T 22-04-2016 IPR001623 DnaJ domain RMET_RS09125 e22fcb1131b419aa4140c55ca13c13ed 345 PRINTS PR00625 DnaJ domain signature 23 38 4.1E-11 T 22-04-2016 IPR001623 DnaJ domain RMET_RS09125 e22fcb1131b419aa4140c55ca13c13ed 345 PRINTS PR00625 DnaJ domain signature 5 23 4.1E-11 T 22-04-2016 IPR001623 DnaJ domain RMET_RS09125 e22fcb1131b419aa4140c55ca13c13ed 345 Gene3D G3DSA:1.10.287.110 3 79 4.5E-18 T 22-04-2016 IPR001623 DnaJ domain RMET_RS09125 e22fcb1131b419aa4140c55ca13c13ed 345 Pfam PF00226 DnaJ domain 3 65 3.0E-17 T 22-04-2016 IPR001623 DnaJ domain RMET_RS09125 e22fcb1131b419aa4140c55ca13c13ed 345 PANTHER PTHR24078 4 66 1.3E-16 T 22-04-2016 RMET_RS09125 e22fcb1131b419aa4140c55ca13c13ed 345 SMART SM00271 2 60 8.7E-18 T 22-04-2016 IPR001623 DnaJ domain RMET_RS16295 99ca03f7546832c126e2f75b55016a9f 224 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 11 221 56.677 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RMET_RS16295 99ca03f7546832c126e2f75b55016a9f 224 Pfam PF01634 ATP phosphoribosyltransferase 61 215 2.2E-48 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RMET_RS16295 99ca03f7546832c126e2f75b55016a9f 224 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RMET_RS16295 99ca03f7546832c126e2f75b55016a9f 224 PANTHER PTHR21403 9 219 2.0E-85 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RMET_RS16295 99ca03f7546832c126e2f75b55016a9f 224 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 12 197 1.1E-58 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RMET_RS16295 99ca03f7546832c126e2f75b55016a9f 224 PANTHER PTHR21403:SF3 9 219 2.0E-85 T 22-04-2016 RMET_RS16295 99ca03f7546832c126e2f75b55016a9f 224 Gene3D G3DSA:3.40.190.10 11 155 1.0E-43 T 22-04-2016 RMET_RS16295 99ca03f7546832c126e2f75b55016a9f 224 SUPERFAMILY SSF53850 12 217 3.47E-65 T 22-04-2016 RMET_RS07115 cfb75733c958e07e60a5aa8229ca6d6c 275 Pfam PF04951 D-aminopeptidase 1 265 2.0E-98 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RMET_RS07115 cfb75733c958e07e60a5aa8229ca6d6c 275 SUPERFAMILY SSF63992 1 274 3.27E-104 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RMET_RS07115 cfb75733c958e07e60a5aa8229ca6d6c 275 Gene3D G3DSA:3.40.50.10780 1 205 3.6E-81 T 22-04-2016 IPR027476 D-aminopeptidase, N-terminal RMET_RS07115 cfb75733c958e07e60a5aa8229ca6d6c 275 PIRSF PIRSF015853 1 275 3.5E-101 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RMET_RS00505 eb0b6310bbca5d860f62f64b021abf3a 212 SUPERFAMILY SSF52833 27 195 5.78E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS00505 eb0b6310bbca5d860f62f64b021abf3a 212 ProSitePatterns PS00194 Thioredoxin family active site. 50 68 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS00505 eb0b6310bbca5d860f62f64b021abf3a 212 Pfam PF01323 DSBA-like thioredoxin domain 97 184 3.9E-12 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RMET_RS00505 eb0b6310bbca5d860f62f64b021abf3a 212 PANTHER PTHR35891:SF2 3 211 2.5E-50 T 22-04-2016 RMET_RS00505 eb0b6310bbca5d860f62f64b021abf3a 212 PANTHER PTHR35891 3 211 2.5E-50 T 22-04-2016 RMET_RS00505 eb0b6310bbca5d860f62f64b021abf3a 212 PIRSF PIRSF001488 1 211 2.3E-55 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RMET_RS00505 eb0b6310bbca5d860f62f64b021abf3a 212 Gene3D G3DSA:3.40.30.10 26 205 3.3E-61 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS04550 c967bd14cab9112860a25728d4d1a8cf 131 PANTHER PTHR34299 1 131 4.7E-31 T 22-04-2016 RMET_RS04550 c967bd14cab9112860a25728d4d1a8cf 131 Gene3D G3DSA:1.10.3830.10 4 122 7.0E-41 T 22-04-2016 RMET_RS04550 c967bd14cab9112860a25728d4d1a8cf 131 Pfam PF01219 Prokaryotic diacylglycerol kinase 18 117 3.5E-30 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RMET_RS04550 c967bd14cab9112860a25728d4d1a8cf 131 PANTHER PTHR34299:SF1 1 131 4.7E-31 T 22-04-2016 RMET_RS05885 07703e858fc181ff21adca14356ddb14 217 Gene3D G3DSA:3.40.50.20 2 93 1.3E-11 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS05885 07703e858fc181ff21adca14356ddb14 217 PANTHER PTHR23416 107 215 1.3E-23 T 22-04-2016 RMET_RS05885 07703e858fc181ff21adca14356ddb14 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 214 1.8E-58 T 22-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like RMET_RS05885 07703e858fc181ff21adca14356ddb14 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 142 176 4.6E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS05885 07703e858fc181ff21adca14356ddb14 217 Gene3D G3DSA:2.160.10.10 98 215 3.5E-29 T 22-04-2016 RMET_RS05885 07703e858fc181ff21adca14356ddb14 217 SUPERFAMILY SSF51161 3 216 4.3E-36 T 22-04-2016 IPR011004 Trimeric LpxA-like RMET_RS06900 124401d87780ef71f59ed73911abf147 335 SUPERFAMILY SSF53850 23 331 1.43E-96 T 22-04-2016 RMET_RS06900 124401d87780ef71f59ed73911abf147 335 Gene3D G3DSA:3.40.190.10 24 165 1.7E-50 T 22-04-2016 RMET_RS06900 124401d87780ef71f59ed73911abf147 335 Gene3D G3DSA:3.40.190.10 173 298 3.4E-32 T 22-04-2016 RMET_RS06900 124401d87780ef71f59ed73911abf147 335 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RMET_RS06900 124401d87780ef71f59ed73911abf147 335 PANTHER PTHR30368:SF2 7 335 2.6E-192 T 22-04-2016 RMET_RS06900 124401d87780ef71f59ed73911abf147 335 Pfam PF13531 Bacterial extracellular solute-binding protein 44 283 1.8E-49 T 22-04-2016 RMET_RS06900 124401d87780ef71f59ed73911abf147 335 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 329 1.1E-156 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RMET_RS06900 124401d87780ef71f59ed73911abf147 335 PANTHER PTHR30368 7 335 2.6E-192 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 PANTHER PTHR10938 1 156 1.3E-60 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 Gene3D G3DSA:3.10.20.80 2 62 8.2E-28 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 68 153 6.9E-40 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 155 26.781 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 SUPERFAMILY SSF54364 1 62 2.88E-23 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 61 1.9E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 Gene3D G3DSA:3.30.110.10 64 156 1.9E-42 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 155 1.8E-64 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RMET_RS05845 6fddb0882298c2fbe5de64571997342c 156 SUPERFAMILY SSF55200 67 156 3.4E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 PANTHER PTHR10381 25 215 4.2E-136 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 PRINTS PR00127 Clp protease catalytic subunit P signature 112 129 4.1E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 PRINTS PR00127 Clp protease catalytic subunit P signature 81 101 4.1E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 PRINTS PR00127 Clp protease catalytic subunit P signature 190 209 4.1E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 PRINTS PR00127 Clp protease catalytic subunit P signature 41 56 4.1E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 PRINTS PR00127 Clp protease catalytic subunit P signature 133 152 4.1E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 Pfam PF00574 Clp protease 35 214 2.7E-88 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 PANTHER PTHR10381:SF22 25 215 4.2E-136 T 22-04-2016 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 134 147 - T 22-04-2016 IPR033135 ClpP, histidine active site RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 24 214 1.5E-105 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 SUPERFAMILY SSF52096 33 215 1.39E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 25 215 44.929 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 Gene3D G3DSA:3.90.226.10 25 214 3.1E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS09450 6d2a2d96d83c9d51a5b971efe3529642 216 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 112 123 - T 22-04-2016 IPR018215 ClpP, Ser active site RMET_RS16185 a065826a99287e35147033d8312d8022 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 8.6E-18 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS16185 a065826a99287e35147033d8312d8022 203 SUPERFAMILY SSF47616 73 202 2.27E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS16185 a065826a99287e35147033d8312d8022 203 Gene3D G3DSA:1.20.1050.10 91 194 6.9E-20 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS16185 a065826a99287e35147033d8312d8022 203 PANTHER PTHR11260 1 203 1.2E-62 T 22-04-2016 RMET_RS16185 a065826a99287e35147033d8312d8022 203 Gene3D G3DSA:3.40.30.10 1 90 9.1E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS16185 a065826a99287e35147033d8312d8022 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 188 2.8E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RMET_RS16185 a065826a99287e35147033d8312d8022 203 SUPERFAMILY SSF52833 1 101 1.88E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS16185 a065826a99287e35147033d8312d8022 203 PANTHER PTHR11260:SF44 1 203 1.2E-62 T 22-04-2016 RMET_RS16495 a85985e07484f67a6cbe1c9dd28a8a46 126 PANTHER PTHR23419 16 126 1.8E-33 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RMET_RS16495 a85985e07484f67a6cbe1c9dd28a8a46 126 Pfam PF03091 CutA1 divalent ion tolerance protein 21 117 1.9E-32 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RMET_RS16495 a85985e07484f67a6cbe1c9dd28a8a46 126 SUPERFAMILY SSF54913 17 119 5.19E-35 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RMET_RS16495 a85985e07484f67a6cbe1c9dd28a8a46 126 Gene3D G3DSA:3.30.70.830 9 118 1.3E-37 T 22-04-2016 RMET_RS15855 cf49e00be733af851707c750c23689d5 258 Gene3D G3DSA:3.90.226.10 1 256 1.5E-102 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS15855 cf49e00be733af851707c750c23689d5 258 PANTHER PTHR11941 1 255 4.1E-125 T 22-04-2016 RMET_RS15855 cf49e00be733af851707c750c23689d5 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 8.5E-84 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS15855 cf49e00be733af851707c750c23689d5 258 SUPERFAMILY SSF52096 1 258 5.86E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS15855 cf49e00be733af851707c750c23689d5 258 PANTHER PTHR11941:SF54 1 255 4.1E-125 T 22-04-2016 RMET_RS15855 cf49e00be733af851707c750c23689d5 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 Gene3D G3DSA:3.30.230.10 82 165 2.3E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 PANTHER PTHR13718 15 170 2.7E-66 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 9.2E-31 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 Gene3D G3DSA:3.30.160.20 15 79 1.3E-25 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 9.3E-65 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 SUPERFAMILY SSF54768 12 81 5.55E-21 T 22-04-2016 RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 80 2.4E-24 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 SUPERFAMILY SSF54211 85 165 3.79E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS16550 2f5e3ab6e17e7e0504456596c536b945 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 34.456 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 Gene3D G3DSA:1.10.1740.10 6 91 6.2E-22 T 22-04-2016 RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 SUPERFAMILY SSF88659 108 169 8.94E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 Gene3D G3DSA:1.10.10.10 109 170 1.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 Pfam PF04542 Sigma-70 region 2 13 78 2.9E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 SUPERFAMILY SSF88946 6 91 2.71E-19 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 168 7.2E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 35 65 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 PANTHER PTHR30173 7 183 6.8E-35 T 22-04-2016 RMET_RS03015 ba5f265ef052e76c0e293e4a1c0a3630 209 Pfam PF08281 Sigma-70, region 4 116 167 2.1E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 72 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 2.1E-94 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 SUPERFAMILY SSF51569 3 328 1.35E-106 T 22-04-2016 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 345 2.3E-184 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 4.1E-96 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 PIRSF PIRSF001359 1 329 1.9E-84 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 PANTHER PTHR30304 1 345 2.9E-115 T 22-04-2016 RMET_RS07635 557b64cda23b6ab5f4d0144365e8da94 345 Gene3D G3DSA:3.20.20.70 1 334 2.7E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS09120 b888541c92a00c7defba5e51a18bdbb3 395 Pfam PF11871 Domain of unknown function (DUF3391) 3 117 2.4E-29 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 RMET_RS09120 b888541c92a00c7defba5e51a18bdbb3 395 SMART SM00471 146 282 1.3E-4 T 22-04-2016 IPR003607 HD/PDEase domain RMET_RS09120 b888541c92a00c7defba5e51a18bdbb3 395 SUPERFAMILY SSF109604 142 311 4.45E-31 T 22-04-2016 RMET_RS09120 b888541c92a00c7defba5e51a18bdbb3 395 Gene3D G3DSA:1.10.3210.10 140 306 8.6E-20 T 22-04-2016 IPR006674 HD domain RMET_RS09120 b888541c92a00c7defba5e51a18bdbb3 395 Pfam PF13487 HD domain 201 263 4.6E-13 T 22-04-2016 RMET_RS17190 a5d8e1e253aee77a8985b64538b06a71 152 SUPERFAMILY SSF75169 38 152 2.02E-24 T 22-04-2016 IPR027396 DsrEFH-like RMET_RS17190 a5d8e1e253aee77a8985b64538b06a71 152 Pfam PF02635 DsrE/DsrF-like family 53 152 1.3E-13 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein RMET_RS17190 a5d8e1e253aee77a8985b64538b06a71 152 PANTHER PTHR37691 1 152 1.0E-18 T 22-04-2016 RMET_RS17190 a5d8e1e253aee77a8985b64538b06a71 152 PANTHER PTHR37691:SF1 1 152 1.0E-18 T 22-04-2016 RMET_RS17190 a5d8e1e253aee77a8985b64538b06a71 152 Gene3D G3DSA:3.40.1260.10 36 152 1.0E-34 T 22-04-2016 IPR027396 DsrEFH-like RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 Pfam PF03958 Bacterial type II/III secretion system short domain 216 289 5.4E-15 T 22-04-2016 IPR005644 NolW-like RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 Pfam PF03958 Bacterial type II/III secretion system short domain 297 425 4.2E-14 T 22-04-2016 IPR005644 NolW-like RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 Pfam PF03958 Bacterial type II/III secretion system short domain 153 212 3.2E-12 T 22-04-2016 IPR005644 NolW-like RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 PRINTS PR00811 Bacterial general secretion pathway protein D signature 651 669 3.3E-28 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 PRINTS PR00811 Bacterial general secretion pathway protein D signature 551 561 3.3E-28 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 PRINTS PR00811 Bacterial general secretion pathway protein D signature 516 540 3.3E-28 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 PRINTS PR00811 Bacterial general secretion pathway protein D signature 674 688 3.3E-28 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 PRINTS PR00811 Bacterial general secretion pathway protein D signature 425 435 3.3E-28 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 Pfam PF00263 Bacterial type II and III secretion system protein 520 687 1.8E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 PANTHER PTHR30332 55 751 7.3E-173 T 22-04-2016 RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 57 695 3.1E-190 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 RMET_RS17040 844ee8369acc40d3ba52e2dba4a72cde 782 PANTHER PTHR30332:SF8 55 751 7.3E-173 T 22-04-2016 RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 Pfam PF13525 Outer membrane lipoprotein 131 252 6.1E-13 T 22-04-2016 RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 131 248 6.0E-37 T 22-04-2016 IPR014162 Tol-Pal system, YbgF RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 Pfam PF16331 TolA binding protein trimerisation 56 117 1.7E-17 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 PANTHER PTHR26312:SF74 142 249 4.7E-18 T 22-04-2016 RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 PANTHER PTHR26312:SF74 13 20 4.7E-18 T 22-04-2016 RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 PANTHER PTHR26312 142 249 4.7E-18 T 22-04-2016 RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 PANTHER PTHR26312 13 20 4.7E-18 T 22-04-2016 RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 SUPERFAMILY SSF48452 135 242 7.85E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS13420 54c897070f9952f428bc9af3cf4910f9 252 Gene3D G3DSA:1.25.40.10 136 238 6.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS01420 16f6ee6c4b28201e916b79ae8b1c349c 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 232 1.0E-56 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS01420 16f6ee6c4b28201e916b79ae8b1c349c 233 PANTHER PTHR11820 25 233 1.1E-89 T 22-04-2016 RMET_RS01420 16f6ee6c4b28201e916b79ae8b1c349c 233 SUPERFAMILY SSF56529 20 233 9.68E-72 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS01420 16f6ee6c4b28201e916b79ae8b1c349c 233 Gene3D G3DSA:3.90.850.10 21 233 5.8E-84 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PANTHER PTHR30523:SF0 53 1009 0.0 T 22-04-2016 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 Pfam PF00311 Phosphoenolpyruvate carboxylase 208 1009 1.8E-293 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 74 1009 19.353 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 SUPERFAMILY SSF51621 82 1009 1.57E-297 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PANTHER PTHR30523 53 1009 0.0 T 22-04-2016 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 212 223 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 Gene3D G3DSA:1.20.1440.90 359 482 8.7E-23 T 22-04-2016 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 328 343 1.4E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 211 224 1.4E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 829 855 1.4E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 479 499 1.4E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 648 668 1.4E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 690 719 1.4E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 263 279 1.4E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS13800 034fb5546ff62039a6510aee06c1ee4f 1009 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 650 662 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RMET_RS00750 c4f1746878822e8b6780c36f6a556957 325 Gene3D G3DSA:3.30.2010.10 117 180 3.0E-15 T 22-04-2016 RMET_RS00750 c4f1746878822e8b6780c36f6a556957 325 PANTHER PTHR22726 54 290 3.2E-53 T 22-04-2016 RMET_RS00750 c4f1746878822e8b6780c36f6a556957 325 Pfam PF01435 Peptidase family M48 121 277 2.4E-30 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 PANTHER PTHR14021:SF15 4 160 6.5E-45 T 22-04-2016 RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 89 162 6.3E-17 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 Gene3D G3DSA:1.10.287.110 2 74 7.2E-26 T 22-04-2016 IPR001623 DnaJ domain RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 PANTHER PTHR14021 4 160 6.5E-45 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 SUPERFAMILY SSF46565 4 76 1.19E-17 T 22-04-2016 IPR001623 DnaJ domain RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 SUPERFAMILY SSF47144 79 170 1.06E-23 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 169 3.1E-28 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 3 171 23.142 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 Gene3D G3DSA:1.20.1280.20 83 171 2.2E-23 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RMET_RS05170 ba54d8c263f5a04b996ca452065a118a 172 SMART SM00271 3 68 2.9E-4 T 22-04-2016 IPR001623 DnaJ domain RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 Gene3D G3DSA:2.40.340.10 352 422 1.1E-32 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 Pfam PF03453 MoeA N-terminal region (domain I and II) 21 185 8.3E-35 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 Gene3D G3DSA:3.40.980.10 181 351 7.0E-64 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 195 334 2.3E-32 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 Pfam PF03454 MoeA C-terminal region (domain IV) 353 424 1.9E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 PANTHER PTHR10192 19 428 1.2E-163 T 22-04-2016 RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 SUPERFAMILY SSF63882 19 193 5.36E-51 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 Gene3D G3DSA:2.170.190.11 62 159 4.4E-26 T 22-04-2016 RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 Gene3D G3DSA:3.90.105.10 160 180 7.5E-21 T 22-04-2016 RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 Gene3D G3DSA:3.90.105.10 39 61 7.5E-21 T 22-04-2016 RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 SUPERFAMILY SSF53218 195 342 5.1E-44 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 Pfam PF00994 Probable molybdopterin binding domain 200 338 1.2E-30 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 SMART SM00852 198 339 4.8E-46 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12255 fc57540bd6a3172ec0a3903e8d68b9c1 428 SUPERFAMILY SSF63867 348 427 3.01E-25 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS01345 b7550473466812f473197efc8145c526 75 Pfam PF11174 Protein of unknown function (DUF2970) 17 72 4.9E-24 T 22-04-2016 IPR021344 Protein of unknown function DUF2970 RMET_RS10875 f4cb5619efedc8f85ff6297b2ac65cf0 249 PIRSF PIRSF005902 1 243 2.2E-35 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS10875 f4cb5619efedc8f85ff6297b2ac65cf0 249 Pfam PF01026 TatD related DNase 3 239 7.5E-38 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS10875 f4cb5619efedc8f85ff6297b2ac65cf0 249 SUPERFAMILY SSF51556 1 239 1.5E-45 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS10875 f4cb5619efedc8f85ff6297b2ac65cf0 249 PANTHER PTHR10060 1 242 1.0E-30 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS10875 f4cb5619efedc8f85ff6297b2ac65cf0 249 Gene3D G3DSA:3.20.20.140 1 239 2.1E-38 T 22-04-2016 RMET_RS04790 30b9e328dec867ae295acba73fc12795 419 SUPERFAMILY SSF53822 30 407 1.06E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS04790 30b9e328dec867ae295acba73fc12795 419 Gene3D G3DSA:3.40.50.2300 146 345 4.8E-77 T 22-04-2016 RMET_RS04790 30b9e328dec867ae295acba73fc12795 419 PANTHER PTHR30483 1 419 9.2E-217 T 22-04-2016 RMET_RS04790 30b9e328dec867ae295acba73fc12795 419 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 403 1.2E-181 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA RMET_RS04790 30b9e328dec867ae295acba73fc12795 419 Pfam PF13433 Periplasmic binding protein domain 31 405 1.2E-174 T 22-04-2016 RMET_RS04790 30b9e328dec867ae295acba73fc12795 419 PANTHER PTHR30483:SF8 1 419 9.2E-217 T 22-04-2016 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 214 384 2.9E-43 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 PANTHER PTHR11780:SF0 197 568 3.9E-151 T 22-04-2016 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 6 149 6.2E-37 T 22-04-2016 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 497 508 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 SMART SM00928 484 529 1.2E-13 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 486 567 9.2E-21 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 SUPERFAMILY SSF52833 3 167 9.17E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 332 347 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 SUPERFAMILY SSF142984 406 475 9.42E-11 T 22-04-2016 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 SUPERFAMILY SSF140490 481 572 2.75E-24 T 22-04-2016 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 PANTHER PTHR11780 197 568 3.9E-151 T 22-04-2016 RMET_RS07655 db07a414c0d9a7b8f84bb6aed8698e99 602 SUPERFAMILY SSF142019 190 405 1.7E-74 T 22-04-2016 RMET_RS17670 18c9e70e7aff537a6e22867566864264 294 PANTHER PTHR11795 1 293 3.6E-117 T 22-04-2016 RMET_RS17670 18c9e70e7aff537a6e22867566864264 294 PANTHER PTHR11795:SF379 1 293 3.6E-117 T 22-04-2016 RMET_RS17670 18c9e70e7aff537a6e22867566864264 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 4.1E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 PANTHER PTHR11938:SF1 1521 1572 0.0 T 22-04-2016 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 Pfam PF01645 Conserved region in glutamate synthase 832 1231 1.1E-153 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 PANTHER PTHR11938 18 946 0.0 T 22-04-2016 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 Pfam PF00310 Glutamine amidotransferases class-II 29 452 3.0E-185 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 Gene3D G3DSA:2.160.20.60 1290 1581 1.6E-104 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 Gene3D G3DSA:3.20.20.70 466 820 4.8E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 SUPERFAMILY SSF56235 29 454 8.06E-154 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 PANTHER PTHR11938:SF1 967 1500 0.0 T 22-04-2016 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 Gene3D G3DSA:3.60.20.10 29 463 1.1E-187 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 Pfam PF04898 Glutamate synthase central domain 483 769 6.7E-111 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 Pfam PF01493 GXGXG motif 1316 1501 1.4E-79 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 SUPERFAMILY SSF69336 1287 1570 7.59E-91 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 Gene3D G3DSA:3.20.20.70 873 1265 4.8E-180 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 SUPERFAMILY SSF51395 479 1276 2.08E-263 T 22-04-2016 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 PANTHER PTHR11938:SF1 18 946 0.0 T 22-04-2016 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 PANTHER PTHR11938 967 1500 0.0 T 22-04-2016 RMET_RS16365 6d1c8646e4fc443fe7836dd9ab0bf5e8 1587 PANTHER PTHR11938 1521 1572 0.0 T 22-04-2016 RMET_RS09205 541f8bca1f400ff0930d7f60b8e3b78e 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 217 1.2E-31 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RMET_RS09205 541f8bca1f400ff0930d7f60b8e3b78e 260 PANTHER PTHR12110:SF12 1 258 2.4E-105 T 22-04-2016 RMET_RS09205 541f8bca1f400ff0930d7f60b8e3b78e 260 PIRSF PIRSF006241 1 260 3.2E-96 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RMET_RS09205 541f8bca1f400ff0930d7f60b8e3b78e 260 SUPERFAMILY SSF51658 1 259 9.69E-85 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RMET_RS09205 541f8bca1f400ff0930d7f60b8e3b78e 260 PANTHER PTHR12110 1 258 2.4E-105 T 22-04-2016 RMET_RS09205 541f8bca1f400ff0930d7f60b8e3b78e 260 Gene3D G3DSA:3.20.20.150 1 259 1.6E-91 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 Gene3D G3DSA:3.40.1190.20 261 526 1.7E-76 T 22-04-2016 IPR029056 Ribokinase-like RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 SUPERFAMILY SSF53613 251 519 1.54E-61 T 22-04-2016 IPR029056 Ribokinase-like RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 256 518 7.3E-55 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 52 238 1.3E-28 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 Pfam PF01256 Carbohydrate kinase 275 516 4.1E-49 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 SUPERFAMILY SSF64153 31 272 6.54E-53 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 Gene3D G3DSA:3.40.50.10260 31 260 6.3E-60 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 465 475 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 251 531 22.076 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 PANTHER PTHR12592 21 535 1.3E-109 T 22-04-2016 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 PIRSF PIRSF017184 35 531 2.5E-111 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 Pfam PF03853 YjeF-related protein N-terminus 53 217 7.2E-39 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 32 238 20.209 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RMET_RS09405 f4c8d02c53412f147a63dbdc84fb38ad 535 PANTHER PTHR12592:SF0 21 535 1.3E-109 T 22-04-2016 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 PRINTS PR00423 Cell division protein FtsZ signature 125 146 3.3E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 PRINTS PR00423 Cell division protein FtsZ signature 188 210 3.3E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 PRINTS PR00423 Cell division protein FtsZ signature 211 232 3.3E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 PRINTS PR00423 Cell division protein FtsZ signature 97 117 3.3E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 SUPERFAMILY SSF55307 203 318 1.05E-39 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 PANTHER PTHR30314 4 394 3.0E-162 T 22-04-2016 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 PANTHER PTHR30314:SF3 4 394 3.0E-162 T 22-04-2016 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 381 34.858 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 SMART SM00865 206 324 5.5E-53 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 325 8.3E-118 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 172 2.7E-35 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 Pfam PF12327 FtsZ family, C-terminal domain 221 315 1.0E-31 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 Gene3D G3DSA:3.30.1330.20 214 321 1.1E-44 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 SUPERFAMILY SSF52490 16 207 2.88E-60 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 Gene3D G3DSA:3.40.50.1440 16 213 1.6E-83 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RMET_RS15640 02a405ca83e1d2802a9cf5c1af19910d 396 SMART SM00864 15 204 4.0E-100 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 SUPERFAMILY SSF82714 182 271 1.09E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 SUPERFAMILY SSF82714 723 808 2.35E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 Gene3D G3DSA:1.10.3850.10 815 1027 1.4E-57 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 Gene3D G3DSA:1.10.3850.10 279 498 8.9E-63 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 SUPERFAMILY SSF82693 135 182 2.44E-24 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 SUPERFAMILY SSF82693 274 330 2.44E-24 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PANTHER PTHR32063:SF13 1 1047 0.0 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PANTHER PTHR32063 1 1047 0.0 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 SUPERFAMILY SSF82693 566 670 6.28E-31 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 SUPERFAMILY SSF82866 807 1030 8.24E-47 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 Gene3D G3DSA:3.30.70.1430 568 671 4.0E-36 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 Gene3D G3DSA:3.30.2090.10 723 808 4.5E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.5E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 Gene3D G3DSA:3.30.2090.10 181 274 9.8E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 Gene3D G3DSA:3.30.70.1430 38 139 2.0E-31 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 SUPERFAMILY SSF82693 38 131 3.66E-24 T 22-04-2016 RMET_RS18030 73c5f38ad37397a9d65286a6b0be5344 1050 SUPERFAMILY SSF82866 298 497 1.57E-51 T 22-04-2016 RMET_RS10005 3bc9c1337b14cbd14fcaccde5270bdc6 277 Gene3D G3DSA:3.40.50.300 43 178 1.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10005 3bc9c1337b14cbd14fcaccde5270bdc6 277 Pfam PF13401 AAA domain 46 175 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10005 3bc9c1337b14cbd14fcaccde5270bdc6 277 SMART SM00382 46 199 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10005 3bc9c1337b14cbd14fcaccde5270bdc6 277 SUPERFAMILY SSF52540 45 263 2.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10005 3bc9c1337b14cbd14fcaccde5270bdc6 277 PANTHER PTHR35894 6 277 1.9E-27 T 22-04-2016 RMET_RS10055 3bc9c1337b14cbd14fcaccde5270bdc6 277 Gene3D G3DSA:3.40.50.300 43 178 1.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10055 3bc9c1337b14cbd14fcaccde5270bdc6 277 Pfam PF13401 AAA domain 46 175 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10055 3bc9c1337b14cbd14fcaccde5270bdc6 277 SMART SM00382 46 199 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10055 3bc9c1337b14cbd14fcaccde5270bdc6 277 SUPERFAMILY SSF52540 45 263 2.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10055 3bc9c1337b14cbd14fcaccde5270bdc6 277 PANTHER PTHR35894 6 277 1.9E-27 T 22-04-2016 RMET_RS15730 3bc9c1337b14cbd14fcaccde5270bdc6 277 Gene3D G3DSA:3.40.50.300 43 178 1.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15730 3bc9c1337b14cbd14fcaccde5270bdc6 277 Pfam PF13401 AAA domain 46 175 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS15730 3bc9c1337b14cbd14fcaccde5270bdc6 277 SMART SM00382 46 199 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS15730 3bc9c1337b14cbd14fcaccde5270bdc6 277 SUPERFAMILY SSF52540 45 263 2.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15730 3bc9c1337b14cbd14fcaccde5270bdc6 277 PANTHER PTHR35894 6 277 1.9E-27 T 22-04-2016 RMET_RS14225 3bc9c1337b14cbd14fcaccde5270bdc6 277 Gene3D G3DSA:3.40.50.300 43 178 1.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14225 3bc9c1337b14cbd14fcaccde5270bdc6 277 Pfam PF13401 AAA domain 46 175 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS14225 3bc9c1337b14cbd14fcaccde5270bdc6 277 SMART SM00382 46 199 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS14225 3bc9c1337b14cbd14fcaccde5270bdc6 277 SUPERFAMILY SSF52540 45 263 2.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14225 3bc9c1337b14cbd14fcaccde5270bdc6 277 PANTHER PTHR35894 6 277 1.9E-27 T 22-04-2016 RMET_RS01625 3bc9c1337b14cbd14fcaccde5270bdc6 277 Gene3D G3DSA:3.40.50.300 43 178 1.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01625 3bc9c1337b14cbd14fcaccde5270bdc6 277 Pfam PF13401 AAA domain 46 175 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01625 3bc9c1337b14cbd14fcaccde5270bdc6 277 SMART SM00382 46 199 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01625 3bc9c1337b14cbd14fcaccde5270bdc6 277 SUPERFAMILY SSF52540 45 263 2.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01625 3bc9c1337b14cbd14fcaccde5270bdc6 277 PANTHER PTHR35894 6 277 1.9E-27 T 22-04-2016 RMET_RS12060 3bc9c1337b14cbd14fcaccde5270bdc6 277 Gene3D G3DSA:3.40.50.300 43 178 1.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12060 3bc9c1337b14cbd14fcaccde5270bdc6 277 Pfam PF13401 AAA domain 46 175 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12060 3bc9c1337b14cbd14fcaccde5270bdc6 277 SMART SM00382 46 199 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12060 3bc9c1337b14cbd14fcaccde5270bdc6 277 SUPERFAMILY SSF52540 45 263 2.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12060 3bc9c1337b14cbd14fcaccde5270bdc6 277 PANTHER PTHR35894 6 277 1.9E-27 T 22-04-2016 RMET_RS12795 3bc9c1337b14cbd14fcaccde5270bdc6 277 Gene3D G3DSA:3.40.50.300 43 178 1.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12795 3bc9c1337b14cbd14fcaccde5270bdc6 277 Pfam PF13401 AAA domain 46 175 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12795 3bc9c1337b14cbd14fcaccde5270bdc6 277 SMART SM00382 46 199 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12795 3bc9c1337b14cbd14fcaccde5270bdc6 277 SUPERFAMILY SSF52540 45 263 2.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12795 3bc9c1337b14cbd14fcaccde5270bdc6 277 PANTHER PTHR35894 6 277 1.9E-27 T 22-04-2016 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 72 82 1.4E-21 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 290 308 1.4E-21 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 15 37 1.4E-21 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 132 1.4E-21 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 163 187 1.4E-21 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 Gene3D G3DSA:3.50.50.60 261 339 4.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 Gene3D G3DSA:3.50.50.60 11 138 4.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PANTHER PTHR22912 1 334 1.5E-76 T 22-04-2016 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 SUPERFAMILY SSF51905 5 322 1.62E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 4.8E-13 T 22-04-2016 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 4.8E-13 T 22-04-2016 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.8E-13 T 22-04-2016 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 PANTHER PTHR22912:SF158 1 334 1.5E-76 T 22-04-2016 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 308 1.2E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 Hamap MF_01685 Ferredoxin--NADP reductase. 13 343 39.3 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RMET_RS05345 4181cf7366f519b2dd1780b7ea5843e4 353 Gene3D G3DSA:3.50.50.60 143 257 3.9E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS15000 ea8d88ecdef5bd71cc9af6ec71f89995 266 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 26 265 2.1E-85 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 RMET_RS15000 ea8d88ecdef5bd71cc9af6ec71f89995 266 PANTHER PTHR30043 27 265 5.8E-80 T 22-04-2016 RMET_RS15000 ea8d88ecdef5bd71cc9af6ec71f89995 266 SUPERFAMILY SSF161098 70 255 3.27E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15000 ea8d88ecdef5bd71cc9af6ec71f89995 266 Gene3D G3DSA:1.10.3720.10 74 265 2.4E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15000 ea8d88ecdef5bd71cc9af6ec71f89995 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 8.6E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15000 ea8d88ecdef5bd71cc9af6ec71f89995 266 PANTHER PTHR30043:SF1 27 265 5.8E-80 T 22-04-2016 RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 SMART SM00345 33 92 4.4E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 Gene3D G3DSA:1.10.10.10 24 93 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 SUPERFAMILY SSF46785 27 95 1.93E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 PANTHER PTHR11751 121 514 2.3E-125 T 22-04-2016 RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 66 82 3.4E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 66 3.4E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 SUPERFAMILY SSF53383 141 503 2.72E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 Gene3D G3DSA:3.40.640.10 175 393 1.3E-56 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 PANTHER PTHR11751:SF10 121 514 2.3E-125 T 22-04-2016 RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 92 8.6E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS08095 6396af9c9f30601cf2a08e6b587b61f3 531 Pfam PF00155 Aminotransferase class I and II 174 447 4.8E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS16120 f041768c28516c431be516579bc9df72 500 PANTHER PTHR24096 16 500 3.8E-161 T 22-04-2016 RMET_RS16120 f041768c28516c431be516579bc9df72 500 PANTHER PTHR24096:SF106 16 500 3.8E-161 T 22-04-2016 RMET_RS16120 f041768c28516c431be516579bc9df72 500 Gene3D G3DSA:3.30.300.30 394 491 3.6E-27 T 22-04-2016 RMET_RS16120 f041768c28516c431be516579bc9df72 500 Gene3D G3DSA:2.30.38.10 316 389 1.8E-14 T 22-04-2016 RMET_RS16120 f041768c28516c431be516579bc9df72 500 ProSitePatterns PS00455 Putative AMP-binding domain signature. 144 155 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS16120 f041768c28516c431be516579bc9df72 500 Pfam PF00501 AMP-binding enzyme 11 398 4.9E-65 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS16120 f041768c28516c431be516579bc9df72 500 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 482 7.9E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS16120 f041768c28516c431be516579bc9df72 500 SUPERFAMILY SSF56801 6 494 9.81E-118 T 22-04-2016 RMET_RS16120 f041768c28516c431be516579bc9df72 500 Gene3D G3DSA:3.40.50.980 13 151 1.6E-24 T 22-04-2016 RMET_RS16120 f041768c28516c431be516579bc9df72 500 Gene3D G3DSA:3.40.50.980 152 315 7.2E-33 T 22-04-2016 RMET_RS15095 700b10d6ae652845a5ab17b191617f56 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 102 297 3.3E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS15095 700b10d6ae652845a5ab17b191617f56 407 SUPERFAMILY SSF111369 101 297 3.53E-15 T 22-04-2016 RMET_RS15095 700b10d6ae652845a5ab17b191617f56 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 79 401 9.8E-33 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS15095 700b10d6ae652845a5ab17b191617f56 407 Gene3D G3DSA:2.40.50.100 209 234 1.2E-11 T 22-04-2016 RMET_RS15095 700b10d6ae652845a5ab17b191617f56 407 Gene3D G3DSA:2.40.50.100 102 134 1.2E-11 T 22-04-2016 RMET_RS15095 700b10d6ae652845a5ab17b191617f56 407 PANTHER PTHR30469 74 407 7.0E-26 T 22-04-2016 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 Pfam PF02954 Bacterial regulatory protein, Fis family 541 579 1.7E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 Gene3D G3DSA:1.10.8.60 410 479 5.5E-23 T 22-04-2016 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 PANTHER PTHR32071 238 471 8.5E-141 T 22-04-2016 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 PANTHER PTHR32071 504 588 8.5E-141 T 22-04-2016 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 SUPERFAMILY SSF52540 238 470 4.93E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 SMART SM00382 257 401 9.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 SUPERFAMILY SSF46689 529 579 7.17E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 261 274 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 SUPERFAMILY SSF111126 33 176 5.75E-10 T 22-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 Pfam PF06505 Activator of aromatic catabolism 8 108 3.3E-39 T 22-04-2016 IPR010523 Activator of aromatic catabolism RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 Pfam PF00158 Sigma-54 interaction domain 238 403 5.8E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 Pfam PF02830 V4R domain 120 181 1.7E-16 T 22-04-2016 IPR004096 4-vinyl reductase, 4VR RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 28 134 5.0E-56 T 22-04-2016 IPR010523 Activator of aromatic catabolism RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 323 338 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 Gene3D G3DSA:1.10.10.60 537 578 4.4E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 545 562 3.8E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 562 582 3.8E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 SMART SM00989 119 181 8.8E-27 T 22-04-2016 IPR004096 4-vinyl reductase, 4VR RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 Gene3D G3DSA:3.30.1380.20 13 186 7.4E-18 T 22-04-2016 RMET_RS06580 4a04b74ac0cd5135de904630ab7c7ea6 589 Gene3D G3DSA:3.40.50.300 236 409 2.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SMART SM00091 561 627 1.6E-6 T 22-04-2016 IPR000014 PAS domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SMART SM00091 433 501 87.0 T 22-04-2016 IPR000014 PAS domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SMART SM00091 305 371 1.3E-11 T 22-04-2016 IPR000014 PAS domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Gene3D G3DSA:3.20.20.450 868 1118 2.1E-79 T 22-04-2016 IPR001633 EAL domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Pfam PF00563 EAL domain 873 1106 8.9E-62 T 22-04-2016 IPR001633 EAL domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Gene3D G3DSA:3.30.70.270 692 855 1.5E-54 T 22-04-2016 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 687 851 7.9E-42 T 22-04-2016 IPR000160 GGDEF domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SMART SM00267 680 852 9.7E-64 T 22-04-2016 IPR000160 GGDEF domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SMART SM00052 864 1111 1.3E-74 T 22-04-2016 IPR001633 EAL domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Gene3D G3DSA:3.30.450.20 298 417 4.0E-26 T 22-04-2016 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 PANTHER PTHR24423 163 566 2.0E-53 T 22-04-2016 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 PANTHER PTHR24423 1058 1073 2.0E-53 T 22-04-2016 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SUPERFAMILY SSF55785 297 418 5.64E-24 T 22-04-2016 IPR000014 PAS domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 558 687 1.4E-9 T 22-04-2016 IPR000014 PAS domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 301 428 4.3E-30 T 22-04-2016 IPR000014 PAS domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Gene3D G3DSA:3.30.450.20 418 557 1.4E-23 T 22-04-2016 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Pfam PF08448 PAS fold 567 681 6.8E-10 T 22-04-2016 IPR013656 PAS fold-4 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SUPERFAMILY SSF55785 418 547 7.15E-18 T 22-04-2016 IPR000014 PAS domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SUPERFAMILY SSF55073 696 853 5.73E-49 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Pfam PF00990 Diguanylate cyclase, GGDEF domain 691 848 1.6E-42 T 22-04-2016 IPR000160 GGDEF domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SUPERFAMILY SSF141868 872 1117 1.96E-74 T 22-04-2016 IPR001633 EAL domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SMART SM00086 638 680 46.0 T 22-04-2016 IPR001610 PAC motif RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SMART SM00086 378 421 2.0E-6 T 22-04-2016 IPR001610 PAC motif RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SMART SM00086 507 549 0.0061 T 22-04-2016 IPR001610 PAC motif RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Gene3D G3DSA:3.30.450.20 558 678 1.6E-18 T 22-04-2016 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Pfam PF08447 PAS fold 330 410 1.3E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Pfam PF08447 PAS fold 456 543 2.0E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 Pfam PF05231 MASE1 23 286 2.4E-10 T 22-04-2016 IPR007895 MASE1 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 SUPERFAMILY SSF55785 546 678 9.99E-18 T 22-04-2016 IPR000014 PAS domain RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 PANTHER PTHR24423:SF477 163 566 2.0E-53 T 22-04-2016 RMET_RS02985 dcdc7667b946ca3dc95096b568a03c84 1121 PANTHER PTHR24423:SF477 1058 1073 2.0E-53 T 22-04-2016 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 420 9.9E-125 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 SUPERFAMILY SSF69075 328 428 2.22E-28 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 Gene3D G3DSA:3.40.50.720 189 370 7.9E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 429 29.184 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 331 426 2.4E-26 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 SUPERFAMILY SSF51735 169 323 1.54E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 PANTHER PTHR21089 283 370 2.6E-109 T 22-04-2016 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 PANTHER PTHR21089 76 267 2.6E-109 T 22-04-2016 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 SUPERFAMILY SSF69742 1 164 3.14E-45 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 PIRSF PIRSF000445 1 434 3.6E-145 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 162 6.9E-48 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 105 128 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 178 316 1.9E-45 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 PANTHER PTHR21089:SF3 283 370 2.6E-109 T 22-04-2016 RMET_RS16045 752f7d2f49573c5a753d5789d900d87c 434 PANTHER PTHR21089:SF3 76 267 2.6E-109 T 22-04-2016 RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 Pfam PF13484 4Fe-4S double cluster binding domain 222 286 8.0E-20 T 22-04-2016 RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 Gene3D G3DSA:3.30.70.20 222 288 1.5E-5 T 22-04-2016 RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 PANTHER PTHR30002:SF4 26 392 1.6E-147 T 22-04-2016 RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 38 387 5.1E-134 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 223 234 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 Pfam PF08331 Domain of unknown function (DUF1730) 86 170 9.1E-21 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 PANTHER PTHR30002 26 392 1.6E-147 T 22-04-2016 RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 SUPERFAMILY SSF46548 172 286 3.98E-18 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RMET_RS02650 525b7c287b958f0562a51b7db8030702 394 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 31 345 47.657 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS03710 eed01462927ba62d6921beff9965467b 311 PIRSF PIRSF000089 1 311 1.8E-104 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 RMET_RS03710 eed01462927ba62d6921beff9965467b 311 SMART SM00893 3 182 2.9E-56 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RMET_RS03710 eed01462927ba62d6921beff9965467b 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 6.9E-35 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RMET_RS03710 eed01462927ba62d6921beff9965467b 311 PANTHER PTHR10909 104 307 1.6E-115 T 22-04-2016 RMET_RS03710 eed01462927ba62d6921beff9965467b 311 PANTHER PTHR10909:SF294 104 307 1.6E-115 T 22-04-2016 RMET_RS03710 eed01462927ba62d6921beff9965467b 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RMET_RS03710 eed01462927ba62d6921beff9965467b 311 SUPERFAMILY SSF52467 187 310 1.76E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS03710 eed01462927ba62d6921beff9965467b 311 Pfam PF01012 Electron transfer flavoprotein domain 4 169 4.1E-39 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RMET_RS03710 eed01462927ba62d6921beff9965467b 311 Gene3D G3DSA:3.40.50.1220 184 310 5.0E-60 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS03710 eed01462927ba62d6921beff9965467b 311 Gene3D G3DSA:3.40.50.620 1 182 1.0E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS03710 eed01462927ba62d6921beff9965467b 311 SUPERFAMILY SSF52402 3 186 2.93E-58 T 22-04-2016 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 SUPERFAMILY SSF56645 3 238 2.36E-66 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 375 2.5E-47 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 115 3.5E-24 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 PANTHER PTHR10909 6 378 7.4E-125 T 22-04-2016 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 SUPERFAMILY SSF47203 225 378 1.94E-55 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 2.4E-19 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 Gene3D G3DSA:1.10.540.10 1 117 8.8E-29 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 Gene3D G3DSA:2.40.110.10 123 216 1.7E-31 T 22-04-2016 RMET_RS13060 2c633a44ef2bdfac47a8e93f6fa0f2fd 382 Gene3D G3DSA:1.20.140.10 217 378 4.5E-66 T 22-04-2016 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 51 183 9.9E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 Gene3D G3DSA:1.10.340.30 36 137 1.1E-43 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 Pfam PF00633 Helix-hairpin-helix motif 115 143 1.6E-5 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 Gene3D G3DSA:1.10.1670.10 138 248 4.4E-31 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 Pfam PF14815 NUDIX domain 258 375 6.7E-22 T 22-04-2016 IPR029119 MutY, C-terminal RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 22 290 1.7E-94 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 PANTHER PTHR10359 23 348 3.1E-80 T 22-04-2016 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 SUPERFAMILY SSF48150 23 250 6.91E-67 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 PANTHER PTHR10359:SF1 23 348 3.1E-80 T 22-04-2016 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 Gene3D G3DSA:3.90.79.10 254 376 2.3E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 SMART SM00478 54 211 5.5E-41 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RMET_RS01505 285843355c03871b7ee2e067c02c522d 383 SUPERFAMILY SSF55811 245 376 3.35E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 Gene3D G3DSA:1.10.540.10 8 117 4.9E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 PIRSF PIRSF016578 2 402 7.3E-32 T 22-04-2016 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 225 1.0E-10 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 Gene3D G3DSA:1.20.140.10 227 400 7.9E-38 T 22-04-2016 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 Gene3D G3DSA:2.40.110.10 140 226 1.9E-28 T 22-04-2016 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 271 383 2.1E-15 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 SUPERFAMILY SSF56645 20 233 5.37E-40 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 PANTHER PTHR10909:SF152 21 234 5.6E-63 T 22-04-2016 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 PANTHER PTHR10909:SF152 252 382 5.6E-63 T 22-04-2016 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 SUPERFAMILY SSF47203 262 400 6.93E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 PANTHER PTHR10909 21 234 5.6E-63 T 22-04-2016 RMET_RS11130 ee51a5f20b24eed4c245a2ce594d33c0 402 PANTHER PTHR10909 252 382 5.6E-63 T 22-04-2016 RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 SUPERFAMILY SSF53187 25 200 1.45E-56 T 22-04-2016 RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 SUPERFAMILY SSF53187 327 407 1.45E-56 T 22-04-2016 RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 PANTHER PTHR11014:SF80 29 411 8.9E-130 T 22-04-2016 RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 Gene3D G3DSA:3.30.70.360 210 306 5.4E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 Pfam PF01546 Peptidase family M20/M25/M40 94 405 4.7E-37 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 SUPERFAMILY SSF55031 201 307 3.14E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 PANTHER PTHR11014 29 411 8.9E-130 T 22-04-2016 RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 Pfam PF07687 Peptidase dimerisation domain 197 307 2.8E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 Gene3D G3DSA:3.40.630.10 27 209 1.6E-60 T 22-04-2016 RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 Gene3D G3DSA:3.40.630.10 350 408 1.6E-60 T 22-04-2016 RMET_RS09805 61f87c5814b9e51448a7086f42cf10e3 411 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 33 405 4.0E-116 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376:SF32 1183 1268 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376:SF32 1309 1395 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376:SF32 576 949 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376:SF32 4 552 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376:SF32 968 1164 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 SUPERFAMILY SSF64484 16 950 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 SUPERFAMILY SSF64484 1140 1370 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 594 32.269 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 4.6E-87 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1026 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 SMART SM00663 236 515 2.0E-173 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 650 1.2E-20 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Gene3D G3DSA:2.40.50.100 1163 1215 4.6E-6 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Gene3D G3DSA:2.40.50.100 988 1024 8.7E-7 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 397 4.4E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 486 1.9E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1382 10.418 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376 1183 1268 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376 1309 1395 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376 576 949 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376 4 552 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 PANTHER PTHR19376 968 1164 0.0 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 769 1.2E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Gene3D G3DSA:2.40.40.20 418 490 1.6E-36 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Gene3D G3DSA:2.40.40.20 350 377 1.6E-36 T 22-04-2016 RMET_RS16715 bdf137c31278d8ee787fb56be31dbe04 1413 Pfam PF04998 RNA polymerase Rpb1, domain 5 772 1322 4.4E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 280 296 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 434 452 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 518 535 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 474 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 310 329 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 180 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 492 507 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 89 114 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 180 199 2.6E-64 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 68 612 1.2E-111 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PANTHER PTHR11686 32 619 2.4E-196 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 PANTHER PTHR11686:SF27 32 619 2.4E-196 T 22-04-2016 RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 SUPERFAMILY SSF56235 57 619 1.04E-156 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS04880 4b3262eafbec3d576c507843db3a2ae7 620 Pfam PF01019 Gamma-glutamyltranspeptidase 82 615 5.8E-146 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 SUPERFAMILY SSF46785 5 115 3.36E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 Gene3D G3DSA:3.40.190.10 206 244 4.5E-4 T 22-04-2016 RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 Pfam PF03466 LysR substrate binding domain 92 282 1.0E-24 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.2E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 Gene3D G3DSA:3.40.190.10 96 173 5.7E-12 T 22-04-2016 RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 Gene3D G3DSA:1.10.10.10 7 91 1.4E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 PANTHER PTHR30537 1 284 8.7E-47 T 22-04-2016 RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 PANTHER PTHR30537:SF3 1 284 8.7E-47 T 22-04-2016 RMET_RS11175 0dbe7d2f034070c08f32e1a46faeb6cf 286 SUPERFAMILY SSF53850 93 284 7.96E-26 T 22-04-2016 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 PIRSF PIRSF002158 10 276 4.8E-94 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 SMART SM01382 125 253 2.6E-84 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 2.5E-52 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 SUPERFAMILY SSF50249 3 126 3.05E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.431 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 Gene3D G3DSA:2.30.30.30 120 196 1.4E-30 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 SMART SM01383 42 119 2.2E-40 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 Gene3D G3DSA:4.10.950.10 197 274 1.5E-34 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 PANTHER PTHR13691:SF5 1 276 1.9E-133 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 PANTHER PTHR13691 1 276 1.9E-133 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 4.1E-121 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 SUPERFAMILY SSF50104 128 273 5.48E-58 T 22-04-2016 IPR008991 Translation protein SH3-like domain RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.1E-31 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16620 e36b61e4c9027ec6b4c5f3f24779774a 276 Gene3D G3DSA:2.40.50.140 1 115 4.6E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 Pfam PF02682 Allophanate hydrolase subunit 1 5 200 7.5E-71 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 PANTHER PTHR34698:SF2 1 213 2.0E-85 T 22-04-2016 RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 Gene3D G3DSA:3.30.1360.40 5 76 2.5E-10 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 SUPERFAMILY SSF50891 87 211 5.31E-45 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 Gene3D G3DSA:2.40.100.10 87 211 3.7E-51 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 210 1.9E-76 T 22-04-2016 IPR010016 KipI family RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 SMART SM00796 4 201 3.3E-98 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 PANTHER PTHR34698 1 213 2.0E-85 T 22-04-2016 RMET_RS00325 bd55803c0b7545f38c5ac2158e56d193 216 SUPERFAMILY SSF160467 6 91 8.89E-11 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 Gene3D G3DSA:1.20.1640.10 295 510 4.9E-62 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 SUPERFAMILY SSF82714 722 807 1.03E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 Gene3D G3DSA:3.30.2090.10 722 808 1.8E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 Gene3D G3DSA:3.30.70.1430 40 141 7.8E-34 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 SUPERFAMILY SSF82866 806 1031 1.44E-44 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PANTHER PTHR32063 1 1040 0.0 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 SUPERFAMILY SSF82693 566 671 3.45E-22 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 Gene3D G3DSA:1.10.3850.10 814 1028 4.2E-57 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 SUPERFAMILY SSF82693 40 134 4.03E-27 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1038 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 SUPERFAMILY SSF82693 138 184 7.5E-26 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 SUPERFAMILY SSF82693 278 334 7.5E-26 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 SUPERFAMILY SSF82714 185 275 4.19E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 474 497 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 340 363 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 449 472 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 395 419 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 367 388 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 7.0E-99 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 Pfam PF00873 AcrB/AcrD/AcrF family 4 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 Gene3D G3DSA:3.30.70.1430 568 671 4.4E-23 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 Gene3D G3DSA:3.30.2090.10 184 279 2.2E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 SUPERFAMILY SSF82866 300 501 1.83E-53 T 22-04-2016 RMET_RS08530 45220e560445d70d3ed26799be8d07ca 1063 PANTHER PTHR32063:SF11 1 1040 0.0 T 22-04-2016 RMET_RS00090 0b6c79d8eefe873a231a0a2b2b5496a4 227 Pfam PF00270 DEAD/DEAH box helicase 41 204 8.4E-29 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS00090 0b6c79d8eefe873a231a0a2b2b5496a4 227 SUPERFAMILY SSF52540 13 222 1.22E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00090 0b6c79d8eefe873a231a0a2b2b5496a4 227 Gene3D G3DSA:3.40.50.300 16 222 1.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00090 0b6c79d8eefe873a231a0a2b2b5496a4 227 PANTHER PTHR24031 16 222 1.7E-67 T 22-04-2016 RMET_RS00090 0b6c79d8eefe873a231a0a2b2b5496a4 227 PANTHER PTHR24031:SF180 16 222 1.7E-67 T 22-04-2016 RMET_RS00090 0b6c79d8eefe873a231a0a2b2b5496a4 227 SMART SM00487 35 225 3.9E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PANTHER PTHR24322 8 142 3.6E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PANTHER PTHR24322 158 190 3.6E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 SUPERFAMILY SSF51735 4 255 2.08E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 Gene3D G3DSA:3.40.50.720 6 257 1.9E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 Pfam PF00106 short chain dehydrogenase 5 198 2.0E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PANTHER PTHR24322:SF57 8 142 3.6E-35 T 22-04-2016 RMET_RS00510 e6f82845b73823a36e70f2e0af494ac6 265 PANTHER PTHR24322:SF57 158 190 3.6E-35 T 22-04-2016 RMET_RS09830 25aa8f482b2d38bf7d1ba1a9e9d123bd 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 17.588 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RMET_RS09830 25aa8f482b2d38bf7d1ba1a9e9d123bd 126 PANTHER PTHR28259 4 126 3.6E-32 T 22-04-2016 RMET_RS09830 25aa8f482b2d38bf7d1ba1a9e9d123bd 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 118 3.0E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RMET_RS09830 25aa8f482b2d38bf7d1ba1a9e9d123bd 126 TIGRFAM TIGR00494 crcB: protein CrcB 8 120 1.7E-28 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RMET_RS08280 60b3bd1ad2b17f71b236a9c006176343 557 Gene3D G3DSA:3.30.70.100 446 526 7.5E-7 T 22-04-2016 RMET_RS08280 60b3bd1ad2b17f71b236a9c006176343 557 SUPERFAMILY SSF82689 445 533 3.92E-12 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RMET_RS08280 60b3bd1ad2b17f71b236a9c006176343 557 Pfam PF00924 Mechanosensitive ion channel 324 528 1.1E-26 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RMET_RS08280 60b3bd1ad2b17f71b236a9c006176343 557 SUPERFAMILY SSF50182 366 432 1.77E-11 T 22-04-2016 IPR010920 LSM domain RMET_RS08280 60b3bd1ad2b17f71b236a9c006176343 557 PANTHER PTHR30221 127 534 1.6E-84 T 22-04-2016 RMET_RS08280 60b3bd1ad2b17f71b236a9c006176343 557 PANTHER PTHR30221:SF4 127 534 1.6E-84 T 22-04-2016 RMET_RS08280 60b3bd1ad2b17f71b236a9c006176343 557 Gene3D G3DSA:2.30.30.60 384 431 5.0E-10 T 22-04-2016 RMET_RS12315 7b82bd40224e119422f3804086d00931 202 PANTHER PTHR30086:SF12 2 196 1.9E-57 T 22-04-2016 RMET_RS12315 7b82bd40224e119422f3804086d00931 202 PANTHER PTHR30086 2 196 1.9E-57 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS12315 7b82bd40224e119422f3804086d00931 202 Pfam PF01810 LysE type translocator 16 194 2.0E-20 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS02205 695c6275e5ecf0ef7c66632d600bc9a5 824 Pfam PF04453 Organic solvent tolerance protein 353 729 4.3E-90 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 RMET_RS02205 695c6275e5ecf0ef7c66632d600bc9a5 824 Gene3D G3DSA:2.60.450.10 109 263 2.3E-12 T 22-04-2016 RMET_RS02205 695c6275e5ecf0ef7c66632d600bc9a5 824 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 35 791 19.488 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 RMET_RS02205 695c6275e5ecf0ef7c66632d600bc9a5 824 PANTHER PTHR30189 110 811 6.2E-59 T 22-04-2016 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 SMART SM00345 57 116 3.0E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 SUPERFAMILY SSF46785 51 120 3.38E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 Pfam PF00392 Bacterial regulatory proteins, gntR family 53 116 7.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 SMART SM00866 136 278 8.2E-34 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 Gene3D G3DSA:3.40.1410.10 141 282 7.8E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 90 106 2.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 76 90 2.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 Gene3D G3DSA:1.10.10.10 51 119 4.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 PANTHER PTHR11751 145 164 1.8E-23 T 22-04-2016 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 PANTHER PTHR11751 52 118 1.8E-23 T 22-04-2016 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 SUPERFAMILY SSF64288 105 283 2.98E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 PANTHER PTHR11751:SF292 145 164 1.8E-23 T 22-04-2016 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 PANTHER PTHR11751:SF292 52 118 1.8E-23 T 22-04-2016 RMET_RS12480 bca1242375f3e6c3fc27229a501da4e8 284 Pfam PF07702 UTRA domain 142 277 5.9E-33 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 188 35.462 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 SUPERFAMILY SSF53178 1 195 8.63E-65 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 Pfam PF01195 Peptidyl-tRNA hydrolase 4 191 9.3E-55 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 Gene3D G3DSA:3.40.50.1470 1 196 5.8E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 PANTHER PTHR17224 2 196 1.3E-71 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 PANTHER PTHR17224:SF1 2 196 1.3E-71 T 22-04-2016 RMET_RS01460 c39587119cc44dc751b111503a58bd73 198 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 193 1.9E-57 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 326 54.848 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 SUPERFAMILY SSF56327 158 326 9.73E-57 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 SUPERFAMILY SSF51735 4 156 2.41E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 320 2.1E-144 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 158 319 3.5E-29 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 153 7.4E-39 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 PIRSF PIRSF000102 2 325 2.4E-65 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 Gene3D G3DSA:3.40.50.720 4 154 1.9E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 PANTHER PTHR23382 2 327 4.7E-191 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RMET_RS12485 507df99cceb7f14091c3c94bf76603b3 327 Gene3D G3DSA:3.90.110.10 156 326 1.7E-68 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RMET_RS15010 cc17f24773ae2e7d7a20c18b9132d08a 279 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 10 249 2.2E-88 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 RMET_RS15010 cc17f24773ae2e7d7a20c18b9132d08a 279 PANTHER PTHR24220 11 249 1.3E-92 T 22-04-2016 RMET_RS15010 cc17f24773ae2e7d7a20c18b9132d08a 279 SMART SM00382 35 230 5.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS15010 cc17f24773ae2e7d7a20c18b9132d08a 279 SUPERFAMILY SSF52540 8 244 4.28E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15010 cc17f24773ae2e7d7a20c18b9132d08a 279 PANTHER PTHR24220:SF408 11 249 1.3E-92 T 22-04-2016 RMET_RS15010 cc17f24773ae2e7d7a20c18b9132d08a 279 Gene3D G3DSA:3.40.50.300 8 256 7.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15010 cc17f24773ae2e7d7a20c18b9132d08a 279 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS15010 cc17f24773ae2e7d7a20c18b9132d08a 279 Pfam PF00005 ABC transporter 26 181 6.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS04530 92438a8d917e25380040438f487aa7e7 147 Pfam PF01152 Bacterial-like globin 24 143 1.2E-45 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 RMET_RS04530 92438a8d917e25380040438f487aa7e7 147 Gene3D G3DSA:1.10.490.10 24 145 1.7E-41 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RMET_RS04530 92438a8d917e25380040438f487aa7e7 147 PANTHER PTHR10681 15 144 4.7E-15 T 22-04-2016 RMET_RS04530 92438a8d917e25380040438f487aa7e7 147 SUPERFAMILY SSF46458 24 144 2.06E-35 T 22-04-2016 IPR009050 Globin-like RMET_RS07810 79bb82c3bc76cf9646ec0f99d2537a6f 90 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 86 8.0E-5 T 22-04-2016 RMET_RS07810 79bb82c3bc76cf9646ec0f99d2537a6f 90 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 85 4.6E-11 T 22-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RMET_RS07810 79bb82c3bc76cf9646ec0f99d2537a6f 90 PIRSF PIRSF017854 5 90 3.3E-35 T 22-04-2016 IPR016704 Conjugal transfer, TrbD RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 43 59 4.6E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 67 83 4.6E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 138 156 4.6E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 PIRSF PIRSF005900 1 161 2.1E-48 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 Pfam PF00210 Ferritin-like domain 24 160 1.2E-28 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 ProSitePatterns PS00819 Dps protein family signature 2. 69 83 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 SUPERFAMILY SSF47240 10 160 4.24E-49 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 PANTHER PTHR30295:SF6 1 160 1.0E-69 T 22-04-2016 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 ProSitePatterns PS00818 Dps protein family signature 1. 43 59 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 PANTHER PTHR30295 1 160 1.0E-69 T 22-04-2016 RMET_RS14735 a21f9baaef567323dab3e52474ac5c31 161 Gene3D G3DSA:1.20.1260.10 4 160 4.1E-68 T 22-04-2016 IPR012347 Ferritin-related RMET_RS01415 55f0477c651b34fc4612d078a84dd484 211 Gene3D G3DSA:1.10.10.10 158 210 4.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01415 55f0477c651b34fc4612d078a84dd484 211 SUPERFAMILY SSF52172 18 207 6.12E-42 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS01415 55f0477c651b34fc4612d078a84dd484 211 Gene3D G3DSA:3.40.50.2300 15 147 1.8E-11 T 22-04-2016 RMET_RS01415 55f0477c651b34fc4612d078a84dd484 211 Pfam PF03861 ANTAR domain 157 207 5.5E-18 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 RMET_RS01415 55f0477c651b34fc4612d078a84dd484 211 PIRSF PIRSF036382 14 211 7.0E-59 T 22-04-2016 IPR008327 Signal transduction response regulator, antiterminator RMET_RS01415 55f0477c651b34fc4612d078a84dd484 211 SMART SM01012 152 207 1.6E-22 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 RMET_RS01415 55f0477c651b34fc4612d078a84dd484 211 PANTHER PTHR26402:SF567 21 206 1.1E-35 T 22-04-2016 RMET_RS01415 55f0477c651b34fc4612d078a84dd484 211 PANTHER PTHR26402 21 206 1.1E-35 T 22-04-2016 RMET_RS10285 1984ab9f7f0f25343221dffa51128646 268 SUPERFAMILY SSF56784 17 262 1.41E-29 T 22-04-2016 IPR023214 HAD-like domain RMET_RS10285 1984ab9f7f0f25343221dffa51128646 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 21 92 2.2E-6 T 22-04-2016 IPR023214 HAD-like domain RMET_RS10285 1984ab9f7f0f25343221dffa51128646 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 228 2.7E-26 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RMET_RS10285 1984ab9f7f0f25343221dffa51128646 268 Gene3D G3DSA:3.40.50.1000 15 86 2.8E-18 T 22-04-2016 IPR023214 HAD-like domain RMET_RS10285 1984ab9f7f0f25343221dffa51128646 268 Gene3D G3DSA:3.40.50.1000 170 262 2.8E-18 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00110 a458828b0b23dac27d86620ee12934d4 260 SMART SM00849 29 221 1.3E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00110 a458828b0b23dac27d86620ee12934d4 260 PANTHER PTHR32145 1 249 4.8E-70 T 22-04-2016 RMET_RS00110 a458828b0b23dac27d86620ee12934d4 260 SUPERFAMILY SSF56281 24 241 6.29E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00110 a458828b0b23dac27d86620ee12934d4 260 Pfam PF00753 Metallo-beta-lactamase superfamily 27 221 1.8E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00110 a458828b0b23dac27d86620ee12934d4 260 Gene3D G3DSA:3.60.15.10 23 242 7.2E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00110 a458828b0b23dac27d86620ee12934d4 260 PANTHER PTHR32145:SF7 1 249 4.8E-70 T 22-04-2016 RMET_RS18160 7c3d6538aceb79ca56238b3c85d57c56 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS18160 7c3d6538aceb79ca56238b3c85d57c56 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 7.0E-16 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS18160 7c3d6538aceb79ca56238b3c85d57c56 44 PANTHER PTHR14503 1 43 9.0E-19 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS18160 7c3d6538aceb79ca56238b3c85d57c56 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 4.3E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS18160 7c3d6538aceb79ca56238b3c85d57c56 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.615 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS18160 7c3d6538aceb79ca56238b3c85d57c56 44 Pfam PF00468 Ribosomal protein L34 1 43 9.4E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS11320 9dbd4329023c902de7b4a13823d2e0e7 251 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 242 5.1E-89 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ RMET_RS11320 9dbd4329023c902de7b4a13823d2e0e7 251 SUPERFAMILY SSF52540 1 242 1.9E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11320 9dbd4329023c902de7b4a13823d2e0e7 251 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 238 2.6E-23 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ RMET_RS11320 9dbd4329023c902de7b4a13823d2e0e7 251 Gene3D G3DSA:3.40.50.300 1 246 8.7E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11320 9dbd4329023c902de7b4a13823d2e0e7 251 PANTHER PTHR13696 1 250 6.1E-18 T 22-04-2016 RMET_RS10905 7075816d1fd89a7eaf75adb5ea58b4db 416 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 232 394 3.9E-39 T 22-04-2016 IPR000160 GGDEF domain RMET_RS10905 7075816d1fd89a7eaf75adb5ea58b4db 416 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 391 1.9E-40 T 22-04-2016 IPR000160 GGDEF domain RMET_RS10905 7075816d1fd89a7eaf75adb5ea58b4db 416 SUPERFAMILY SSF55073 241 396 6.04E-42 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS10905 7075816d1fd89a7eaf75adb5ea58b4db 416 PANTHER PTHR10799 198 391 4.5E-23 T 22-04-2016 RMET_RS10905 7075816d1fd89a7eaf75adb5ea58b4db 416 Gene3D G3DSA:3.30.70.270 237 398 1.4E-47 T 22-04-2016 RMET_RS10905 7075816d1fd89a7eaf75adb5ea58b4db 416 PANTHER PTHR10799:SF686 198 391 4.5E-23 T 22-04-2016 RMET_RS10905 7075816d1fd89a7eaf75adb5ea58b4db 416 SMART SM00267 225 396 1.9E-49 T 22-04-2016 IPR000160 GGDEF domain RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 PANTHER PTHR10799 284 565 3.1E-24 T 22-04-2016 RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 PANTHER PTHR10799 14 191 3.1E-24 T 22-04-2016 RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 566 5.8E-43 T 22-04-2016 IPR000160 GGDEF domain RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 Gene3D G3DSA:3.30.70.270 406 575 1.4E-48 T 22-04-2016 RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 SMART SM00267 393 570 3.0E-52 T 22-04-2016 IPR000160 GGDEF domain RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 Pfam PF17151 Periplasmic sensor domain 47 230 4.2E-61 T 22-04-2016 IPR033416 Periplasmic sensor domain CHASE7 UniPathway: UPA00694 RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 PANTHER PTHR10799:SF774 284 565 3.1E-24 T 22-04-2016 RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 PANTHER PTHR10799:SF774 14 191 3.1E-24 T 22-04-2016 RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 SUPERFAMILY SSF55073 409 570 8.63E-45 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS09375 80dcec7508a7c17f5e3951794ea4cd36 586 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 401 569 5.3E-48 T 22-04-2016 IPR000160 GGDEF domain RMET_RS14330 de980671db67c9694e2728190f8b5a71 304 Gene3D G3DSA:1.10.3720.10 100 297 2.4E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS14330 de980671db67c9694e2728190f8b5a71 304 PANTHER PTHR30151:SF0 55 301 2.2E-95 T 22-04-2016 RMET_RS14330 de980671db67c9694e2728190f8b5a71 304 PANTHER PTHR30151 55 301 2.2E-95 T 22-04-2016 RMET_RS14330 de980671db67c9694e2728190f8b5a71 304 SUPERFAMILY SSF161098 106 288 1.24E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS14330 de980671db67c9694e2728190f8b5a71 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 297 6.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS23225 f0da9c46353610ca86ba324220b243f5 84 PANTHER PTHR11717:SF7 1 84 6.5E-19 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RMET_RS23225 f0da9c46353610ca86ba324220b243f5 84 PANTHER PTHR11717 1 84 6.5E-19 T 22-04-2016 RMET_RS23225 f0da9c46353610ca86ba324220b243f5 84 Gene3D G3DSA:3.40.50.270 2 79 1.0E-20 T 22-04-2016 RMET_RS23225 f0da9c46353610ca86ba324220b243f5 84 SUPERFAMILY SSF52788 3 82 1.11E-19 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS23225 f0da9c46353610ca86ba324220b243f5 84 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 55 70 1.7E-5 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RMET_RS23225 f0da9c46353610ca86ba324220b243f5 84 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 21 37 1.7E-5 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RMET_RS23225 f0da9c46353610ca86ba324220b243f5 84 SMART SM00226 1 81 0.0063 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS23225 f0da9c46353610ca86ba324220b243f5 84 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 2 76 2.5E-14 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS03290 7b05ed1101f16c55304a388bf625c8e3 57 Pfam PF04964 Flp/Fap pilin component 11 55 2.8E-20 T 22-04-2016 IPR007047 Flp/Fap pilin component RMET_RS01735 cb2d863c3b79de129440b2393fa3be77 302 SMART SM00062 41 273 3.9E-54 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS01735 cb2d863c3b79de129440b2393fa3be77 302 SUPERFAMILY SSF53850 13 273 3.26E-60 T 22-04-2016 RMET_RS01735 cb2d863c3b79de129440b2393fa3be77 302 PANTHER PTHR30085 6 300 1.8E-112 T 22-04-2016 RMET_RS01735 cb2d863c3b79de129440b2393fa3be77 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 8.5E-44 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS01735 cb2d863c3b79de129440b2393fa3be77 302 PANTHER PTHR30085:SF2 6 300 1.8E-112 T 22-04-2016 RMET_RS01735 cb2d863c3b79de129440b2393fa3be77 302 Gene3D G3DSA:3.40.190.10 127 233 8.0E-29 T 22-04-2016 RMET_RS01735 cb2d863c3b79de129440b2393fa3be77 302 Gene3D G3DSA:3.40.190.10 38 126 4.0E-27 T 22-04-2016 RMET_RS01735 cb2d863c3b79de129440b2393fa3be77 302 Gene3D G3DSA:3.40.190.10 234 275 4.0E-27 T 22-04-2016 RMET_RS13175 b339fee0da47671f8d4f7b724505cac5 291 PANTHER PTHR16950 18 274 6.7E-39 T 22-04-2016 RMET_RS13175 b339fee0da47671f8d4f7b724505cac5 291 Pfam PF02535 ZIP Zinc transporter 108 269 1.7E-28 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 Gene3D G3DSA:3.40.1780.10 184 346 7.0E-99 T 22-04-2016 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 Gene3D G3DSA:3.40.1780.10 3 70 7.0E-99 T 22-04-2016 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 347 46.652 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 PANTHER PTHR30307 4 353 5.8E-161 T 22-04-2016 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 Pfam PF02547 Queuosine biosynthesis protein 4 346 5.2E-130 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 SUPERFAMILY SSF111337 3 346 1.44E-131 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 Gene3D G3DSA:2.40.10.240 72 141 4.3E-10 T 22-04-2016 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 PANTHER PTHR30307:SF0 4 353 5.8E-161 T 22-04-2016 RMET_RS14755 fb9f3932f4832712b4a4b072752a038a 353 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 346 6.7E-127 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 Gene3D G3DSA:3.40.50.300 284 538 1.2E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 Gene3D G3DSA:3.40.50.300 18 267 1.2E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 SUPERFAMILY SSF52540 17 264 4.17E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 PANTHER PTHR24220 18 422 4.2E-165 T 22-04-2016 RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 516 540 0.015 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 270 1.2E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 SMART SM00382 45 242 5.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 SMART SM00382 321 514 1.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 PANTHER PTHR24220:SF574 18 422 4.2E-165 T 22-04-2016 RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 Pfam PF00005 ABC transporter 37 192 5.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 Pfam PF00005 ABC transporter 313 465 3.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 SUPERFAMILY SSF52540 307 536 6.41E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS10760 67f1a667c9aa1009826e16e24a7a91e1 545 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-41 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.1E-41 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.1E-41 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-41 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.1E-41 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.1E-41 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.1E-41 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-41 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 Gene3D G3DSA:3.30.2090.10 726 826 1.0E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 Gene3D G3DSA:3.30.2090.10 183 268 1.2E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 Gene3D G3DSA:3.30.70.1430 40 140 3.5E-18 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 Pfam PF00873 AcrB/AcrD/AcrF family 3 1045 1.8E-194 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PANTHER PTHR32063 1 1044 0.0 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 SUPERFAMILY SSF82693 136 182 3.19E-11 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 SUPERFAMILY SSF82693 268 324 3.19E-11 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 PANTHER PTHR32063:SF8 1 1044 0.0 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 Gene3D G3DSA:1.10.3850.10 829 1045 5.9E-50 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 Gene3D G3DSA:1.10.3850.10 274 491 4.9E-53 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 SUPERFAMILY SSF82866 823 1050 5.62E-46 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 SUPERFAMILY SSF82866 291 489 1.31E-39 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 SUPERFAMILY SSF82714 728 823 6.02E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 SUPERFAMILY SSF82693 40 134 1.41E-17 T 22-04-2016 RMET_RS08765 d1a7280897cefe75f693f6e9405a9cea 1065 SUPERFAMILY SSF82714 183 266 1.57E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS06990 174dc7281cb07c59c0d9b0ada27aee5c 144 Pfam PF00582 Universal stress protein family 1 144 4.4E-28 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS06990 174dc7281cb07c59c0d9b0ada27aee5c 144 PRINTS PR01438 Universal stress protein signature 122 144 5.0E-16 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS06990 174dc7281cb07c59c0d9b0ada27aee5c 144 PRINTS PR01438 Universal stress protein signature 2 20 5.0E-16 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS06990 174dc7281cb07c59c0d9b0ada27aee5c 144 PRINTS PR01438 Universal stress protein signature 104 116 5.0E-16 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS06990 174dc7281cb07c59c0d9b0ada27aee5c 144 PANTHER PTHR31964:SF26 1 144 1.4E-25 T 22-04-2016 RMET_RS06990 174dc7281cb07c59c0d9b0ada27aee5c 144 SUPERFAMILY SSF52402 1 144 3.27E-31 T 22-04-2016 RMET_RS06990 174dc7281cb07c59c0d9b0ada27aee5c 144 PANTHER PTHR31964 1 144 1.4E-25 T 22-04-2016 RMET_RS06990 174dc7281cb07c59c0d9b0ada27aee5c 144 Gene3D G3DSA:3.40.50.620 1 144 4.5E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 SUPERFAMILY SSF52743 151 489 3.27E-60 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 TIGRFAM TIGR03867 MprA_tail: MprA protease C-terminal rhombosortase-interaction domain 508 534 2.6E-9 T 22-04-2016 IPR021206 MprA protease C-terminal rhombosortase-interaction domain RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 232 242 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PRINTS PR00723 Subtilisin serine protease family (S8) signature 166 185 3.1E-10 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PRINTS PR00723 Subtilisin serine protease family (S8) signature 228 241 3.1E-10 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PRINTS PR00723 Subtilisin serine protease family (S8) signature 421 437 3.1E-10 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PANTHER PTHR10795 1 213 1.7E-53 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PANTHER PTHR10795 231 395 1.7E-53 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PANTHER PTHR10795 420 489 1.7E-53 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PANTHER PTHR10795:SF419 1 213 1.7E-53 T 22-04-2016 RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PANTHER PTHR10795:SF419 231 395 1.7E-53 T 22-04-2016 RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 PANTHER PTHR10795:SF419 420 489 1.7E-53 T 22-04-2016 RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 Pfam PF00082 Subtilase family 167 460 4.5E-31 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 422 432 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site RMET_RS05010 4c7ab14a36686e03550604cd4fc2583d 540 Gene3D G3DSA:3.40.50.200 129 489 2.7E-67 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RMET_RS01595 a65ab6ea3af117d19309a2d4be4e71ba 418 PANTHER PTHR23504:SF37 19 406 2.5E-98 T 22-04-2016 RMET_RS01595 a65ab6ea3af117d19309a2d4be4e71ba 418 PANTHER PTHR23504 19 406 2.5E-98 T 22-04-2016 RMET_RS01595 a65ab6ea3af117d19309a2d4be4e71ba 418 Gene3D G3DSA:1.20.1250.20 36 214 1.5E-29 T 22-04-2016 RMET_RS01595 a65ab6ea3af117d19309a2d4be4e71ba 418 Gene3D G3DSA:1.20.1250.20 230 407 8.0E-20 T 22-04-2016 RMET_RS01595 a65ab6ea3af117d19309a2d4be4e71ba 418 SUPERFAMILY SSF103473 33 404 8.76E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS01595 a65ab6ea3af117d19309a2d4be4e71ba 418 Pfam PF07690 Major Facilitator Superfamily 40 220 1.2E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS01595 a65ab6ea3af117d19309a2d4be4e71ba 418 Pfam PF07690 Major Facilitator Superfamily 242 410 1.4E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS01595 a65ab6ea3af117d19309a2d4be4e71ba 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 90 106 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 PANTHER PTHR30136 9 257 3.9E-81 T 22-04-2016 RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 PANTHER PTHR30136:SF4 9 257 3.9E-81 T 22-04-2016 RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 SUPERFAMILY SSF55781 80 256 4.25E-37 T 22-04-2016 IPR029016 GAF domain-like RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 Pfam PF01614 Bacterial transcriptional regulator 136 249 1.0E-9 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 Pfam PF09339 IclR helix-turn-helix domain 16 65 6.7E-11 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 Gene3D G3DSA:3.30.450.40 84 257 5.8E-38 T 22-04-2016 IPR029016 GAF domain-like RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 SMART SM00346 13 103 2.8E-12 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 SUPERFAMILY SSF46785 15 85 9.09E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09095 ba7b7e02985959232f2284268c4ed54d 260 Gene3D G3DSA:1.10.10.10 8 82 3.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04515 338c2d40525a4c0b60a7acd0d7c72b44 365 Gene3D G3DSA:1.10.10.10 3 114 3.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04515 338c2d40525a4c0b60a7acd0d7c72b44 365 SUPERFAMILY SSF53850 196 339 2.72E-12 T 22-04-2016 RMET_RS04515 338c2d40525a4c0b60a7acd0d7c72b44 365 Pfam PF12727 PBP superfamily domain 135 324 3.7E-48 T 22-04-2016 IPR024370 PBP domain RMET_RS04515 338c2d40525a4c0b60a7acd0d7c72b44 365 SUPERFAMILY SSF46785 4 134 2.65E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04515 338c2d40525a4c0b60a7acd0d7c72b44 365 PANTHER PTHR38431 121 351 6.4E-26 T 22-04-2016 RMET_RS04515 338c2d40525a4c0b60a7acd0d7c72b44 365 Gene3D G3DSA:3.40.190.10 204 334 2.3E-6 T 22-04-2016 RMET_RS04515 338c2d40525a4c0b60a7acd0d7c72b44 365 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 3.5E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 181 1.6E-18 T 22-04-2016 IPR024478 4HB MCP domain RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 Pfam PF00672 HAMP domain 190 257 1.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 317 509 4.3E-59 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 7.0E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 7.0E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 7.0E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 22 7.0E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 7.0E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 SMART SM00304 209 262 0.0012 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 Gene3D G3DSA:1.10.287.950 277 482 2.4E-60 T 22-04-2016 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 PANTHER PTHR32089 156 513 1.4E-135 T 22-04-2016 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 PANTHER PTHR32089:SF63 156 513 1.4E-135 T 22-04-2016 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 SMART SM00283 263 510 2.8E-86 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RMET_RS00815 b0eb59a1e4387201a9183bdd9a2063f8 513 SUPERFAMILY SSF58104 230 511 6.67E-75 T 22-04-2016 RMET_RS01905 198344cfd205b1701f07a98a3050ad5b 109 PANTHER PTHR34404:SF2 2 96 3.0E-17 T 22-04-2016 RMET_RS01905 198344cfd205b1701f07a98a3050ad5b 109 SMART SM00834 1 43 6.2E-18 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RMET_RS01905 198344cfd205b1701f07a98a3050ad5b 109 Pfam PF09723 Zinc ribbon domain 1 37 4.9E-15 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RMET_RS01905 198344cfd205b1701f07a98a3050ad5b 109 PANTHER PTHR34404 2 96 3.0E-17 T 22-04-2016 RMET_RS01905 198344cfd205b1701f07a98a3050ad5b 109 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 53 1.5E-20 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 SUPERFAMILY SSF51419 25 276 1.28E-64 T 22-04-2016 IPR029066 PLP-binding barrel RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PANTHER PTHR11482:SF5 13 393 1.1E-78 T 22-04-2016 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 Gene3D G3DSA:2.40.37.10 262 393 1.3E-29 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 273 3.4E-33 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 SUPERFAMILY SSF50621 241 394 3.56E-35 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 218 231 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 Gene3D G3DSA:3.20.20.10 27 261 1.0E-66 T 22-04-2016 IPR029066 PLP-binding barrel RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 279 391 2.3E-11 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PRINTS PR01182 Ornithine decarboxylase signature 89 113 4.9E-7 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PRINTS PR01182 Ornithine decarboxylase signature 358 371 4.9E-7 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PRINTS PR01182 Ornithine decarboxylase signature 46 73 4.9E-7 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 179 192 3.7E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 48 66 3.7E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 68 80 3.7E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 282 3.7E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS05585 4c60d1f6505c3b623ab81b0d4c77efca 397 PANTHER PTHR11482 13 393 1.1E-78 T 22-04-2016 RMET_RS16610 1e2c823215f2e1ae8a8f5f2f1f717e39 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 2.3E-43 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16610 1e2c823215f2e1ae8a8f5f2f1f717e39 109 PANTHER PTHR13501 1 107 1.2E-47 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16610 1e2c823215f2e1ae8a8f5f2f1f717e39 109 Gene3D G3DSA:3.90.470.10 1 108 5.7E-42 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RMET_RS16610 1e2c823215f2e1ae8a8f5f2f1f717e39 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 3.8E-33 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RMET_RS16610 1e2c823215f2e1ae8a8f5f2f1f717e39 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16610 1e2c823215f2e1ae8a8f5f2f1f717e39 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.812 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16610 1e2c823215f2e1ae8a8f5f2f1f717e39 109 SUPERFAMILY SSF54843 1 108 6.93E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 Gene3D G3DSA:1.20.1250.20 51 224 1.3E-26 T 22-04-2016 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 164 1.0E-8 T 22-04-2016 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 174 198 1.0E-8 T 22-04-2016 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 53 77 1.0E-8 T 22-04-2016 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 PRINTS PR01036 Tetracycline resistance protein TetB signature 372 392 1.0E-8 T 22-04-2016 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 SUPERFAMILY SSF103473 283 506 7.19E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 SUPERFAMILY SSF103473 35 227 7.19E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 Pfam PF07690 Major Facilitator Superfamily 54 444 3.6E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 PANTHER PTHR23501 45 507 3.1E-98 T 22-04-2016 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 Gene3D G3DSA:1.20.1250.20 295 504 1.6E-12 T 22-04-2016 RMET_RS07020 9e780ffd69135f612cda9feb35f8a281 508 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 50 459 6.4E-77 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RMET_RS13255 b6b32203e5ecf17306e58bb011fc00ec 160 Pfam PF01814 Hemerythrin HHE cation binding domain 32 144 2.2E-7 T 22-04-2016 IPR012312 Haemerythrin-like RMET_RS13255 b6b32203e5ecf17306e58bb011fc00ec 160 ProSitePatterns PS00550 Hemerythrin family signature. 66 89 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 RMET_RS13255 b6b32203e5ecf17306e58bb011fc00ec 160 Gene3D G3DSA:1.20.120.50 21 146 7.8E-19 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RMET_RS13255 b6b32203e5ecf17306e58bb011fc00ec 160 SUPERFAMILY SSF47188 20 147 9.29E-23 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RMET_RS15400 9a51d0ecde1110cc90bc1d330d4061c1 323 PIRSF PIRSF017082 1 323 9.5E-71 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS15400 9a51d0ecde1110cc90bc1d330d4061c1 323 SUPERFAMILY SSF53850 115 284 6.98E-14 T 22-04-2016 RMET_RS15400 9a51d0ecde1110cc90bc1d330d4061c1 323 PANTHER PTHR30349 6 294 6.9E-65 T 22-04-2016 RMET_RS15400 9a51d0ecde1110cc90bc1d330d4061c1 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 319 2.7E-74 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS15400 9a51d0ecde1110cc90bc1d330d4061c1 323 PANTHER PTHR30349:SF1 6 294 6.9E-65 T 22-04-2016 RMET_RS02900 f1726f131d67a59c460cd7ccf1798bdd 854 Pfam PF00577 Outer membrane usher protein 205 757 1.4E-166 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02900 f1726f131d67a59c460cd7ccf1798bdd 854 PANTHER PTHR30451 42 850 3.7E-270 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02900 f1726f131d67a59c460cd7ccf1798bdd 854 SUPERFAMILY SSF141729 42 168 3.4E-27 T 22-04-2016 RMET_RS02900 f1726f131d67a59c460cd7ccf1798bdd 854 Pfam PF13954 PapC N-terminal domain 43 190 4.7E-37 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 RMET_RS02900 f1726f131d67a59c460cd7ccf1798bdd 854 Pfam PF13953 PapC C-terminal domain 767 831 2.1E-22 T 22-04-2016 IPR025949 PapC-like, C-terminal domain RMET_RS02900 f1726f131d67a59c460cd7ccf1798bdd 854 PANTHER PTHR30451:SF1 42 850 3.7E-270 T 22-04-2016 RMET_RS14380 f9986599e5a1e717e93cd46c98290df6 330 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 19 301 37.378 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RMET_RS14380 f9986599e5a1e717e93cd46c98290df6 330 Pfam PF02401 LytB protein 21 297 1.4E-91 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RMET_RS14380 f9986599e5a1e717e93cd46c98290df6 330 PANTHER PTHR30426 19 324 1.9E-148 T 22-04-2016 RMET_RS14380 f9986599e5a1e717e93cd46c98290df6 330 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 20 299 9.8E-100 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RMET_RS13685 763035d3e1b06fc2827b56ab644bd583 197 Pfam PF02397 Bacterial sugar transferase 2 176 2.3E-57 T 22-04-2016 IPR003362 Bacterial sugar transferase RMET_RS13685 763035d3e1b06fc2827b56ab644bd583 197 PANTHER PTHR30576 1 184 5.2E-111 T 22-04-2016 RMET_RS13685 763035d3e1b06fc2827b56ab644bd583 197 PANTHER PTHR30576:SF8 1 184 5.2E-111 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Gene3D G3DSA:3.30.365.10 377 452 1.0E-7 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 PANTHER PTHR11908 640 684 2.1E-119 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 PANTHER PTHR11908 753 940 2.1E-119 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 PANTHER PTHR11908 43 197 2.1E-119 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 PANTHER PTHR11908 240 612 2.1E-119 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 SUPERFAMILY SSF56003 264 612 7.59E-111 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 SUPERFAMILY SSF56003 796 940 7.59E-111 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 SUPERFAMILY SSF56003 640 744 7.59E-111 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 685 880 1.9E-14 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 265 604 3.2E-54 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Gene3D G3DSA:3.30.365.10 454 554 3.8E-51 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Gene3D G3DSA:3.30.365.10 806 940 3.8E-51 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 SUPERFAMILY SSF54665 51 175 6.63E-15 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Gene3D G3DSA:3.30.365.10 555 719 1.1E-20 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Gene3D G3DSA:3.30.365.10 790 805 1.1E-20 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Gene3D G3DSA:3.90.1170.50 39 171 4.5E-6 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 PANTHER PTHR11908:SF71 640 684 2.1E-119 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 PANTHER PTHR11908:SF71 753 940 2.1E-119 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 PANTHER PTHR11908:SF71 43 197 2.1E-119 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 PANTHER PTHR11908:SF71 240 612 2.1E-119 T 22-04-2016 RMET_RS07130 7d3710d594f6313c57d22bdb301e176a 941 Gene3D G3DSA:3.30.365.10 264 374 1.2E-11 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS00160 abdf0e85ee4a9a10534a5941ba1acaf0 277 Gene3D G3DSA:2.40.160.10 1 277 7.3E-51 T 22-04-2016 IPR023614 Porin domain RMET_RS00160 abdf0e85ee4a9a10534a5941ba1acaf0 277 SUPERFAMILY SSF56935 1 277 6.11E-46 T 22-04-2016 RMET_RS00160 abdf0e85ee4a9a10534a5941ba1acaf0 277 Pfam PF13609 Gram-negative porin 1 252 3.2E-27 T 22-04-2016 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PANTHER PTHR10992 47 319 5.0E-54 T 22-04-2016 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 263 277 1.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 1.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 108 1.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 157 170 1.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 Gene3D G3DSA:3.40.50.1820 35 318 8.0E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PRINTS PR00412 Epoxide hydrolase signature 143 156 2.1E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PRINTS PR00412 Epoxide hydrolase signature 74 92 2.1E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PRINTS PR00412 Epoxide hydrolase signature 294 316 2.1E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 PRINTS PR00412 Epoxide hydrolase signature 261 277 2.1E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 SUPERFAMILY SSF53474 45 318 1.01E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS18085 a11220faa1f7101d894f4452e088747c 333 Pfam PF00561 alpha/beta hydrolase fold 69 306 2.0E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06480 a70c02c7e143fa5e305a171033c6fe26 115 PANTHER PTHR34535:SF2 2 115 8.1E-33 T 22-04-2016 RMET_RS06480 a70c02c7e143fa5e305a171033c6fe26 115 PANTHER PTHR34535 2 115 8.1E-33 T 22-04-2016 RMET_RS06480 a70c02c7e143fa5e305a171033c6fe26 115 PIRSF PIRSF004761 1 115 1.4E-29 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RMET_RS06480 a70c02c7e143fa5e305a171033c6fe26 115 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 22.381 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RMET_RS06480 a70c02c7e143fa5e305a171033c6fe26 115 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 6.2E-26 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RMET_RS08850 664c3d98c7753b2c2716157d6fbec5a4 294 Gene3D G3DSA:3.40.190.10 195 263 2.0E-14 T 22-04-2016 RMET_RS08850 664c3d98c7753b2c2716157d6fbec5a4 294 Pfam PF03466 LysR substrate binding domain 90 290 4.2E-38 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS08850 664c3d98c7753b2c2716157d6fbec5a4 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.1E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08850 664c3d98c7753b2c2716157d6fbec5a4 294 SUPERFAMILY SSF46785 4 114 1.21E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08850 664c3d98c7753b2c2716157d6fbec5a4 294 Gene3D G3DSA:1.10.10.10 4 87 1.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08850 664c3d98c7753b2c2716157d6fbec5a4 294 SUPERFAMILY SSF53850 90 291 1.69E-35 T 22-04-2016 RMET_RS08850 664c3d98c7753b2c2716157d6fbec5a4 294 Gene3D G3DSA:3.40.190.10 91 194 1.0E-22 T 22-04-2016 RMET_RS08850 664c3d98c7753b2c2716157d6fbec5a4 294 PANTHER PTHR30126 4 291 2.4E-56 T 22-04-2016 RMET_RS04155 760cb6c8bfbb6803b5d1789efab1a2fd 151 Pfam PF09980 Predicted membrane protein (DUF2214) 4 149 5.8E-53 T 22-04-2016 IPR018706 Protein of unknown function DUF2214, membrane RMET_RS15300 920ee1cb5cb2a8b2c2a014318ab8ff6a 233 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 7 231 9.8E-97 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 RMET_RS15300 920ee1cb5cb2a8b2c2a014318ab8ff6a 233 PANTHER PTHR30400:SF0 2 199 5.7E-69 T 22-04-2016 RMET_RS15300 920ee1cb5cb2a8b2c2a014318ab8ff6a 233 SUPERFAMILY SSF53955 52 208 2.81E-56 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS15300 920ee1cb5cb2a8b2c2a014318ab8ff6a 233 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 3 232 38.309 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 RMET_RS15300 920ee1cb5cb2a8b2c2a014318ab8ff6a 233 Gene3D G3DSA:1.10.3810.10 58 226 2.2E-63 T 22-04-2016 RMET_RS15300 920ee1cb5cb2a8b2c2a014318ab8ff6a 233 Pfam PF00912 Transglycosylase 57 212 2.0E-52 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RMET_RS15300 920ee1cb5cb2a8b2c2a014318ab8ff6a 233 PANTHER PTHR30400 2 199 5.7E-69 T 22-04-2016 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 PANTHER PTHR24423:SF505 57 275 3.5E-52 T 22-04-2016 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 Gene3D G3DSA:3.30.565.10 130 275 4.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 Pfam PF00512 His Kinase A (phospho-acceptor) domain 58 120 4.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 210 224 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 239 257 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 276 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 228 238 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 SMART SM00388 56 126 9.9E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 SMART SM00387 168 277 3.4E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 168 277 1.8E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 SUPERFAMILY SSF47384 57 120 1.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 Gene3D G3DSA:1.10.287.130 58 116 5.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 SUPERFAMILY SSF55874 130 275 2.75E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08505 4c1ace125c5f243164d3bb89cfaea98b 317 PANTHER PTHR24423 57 275 3.5E-52 T 22-04-2016 RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 PANTHER PTHR11265:SF0 1 322 2.2E-131 T 22-04-2016 RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 Pfam PF01795 MraW methylase family 12 319 3.7E-93 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 PIRSF PIRSF004486 9 321 3.6E-93 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 SUPERFAMILY SSF81799 118 221 7.98E-32 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 SUPERFAMILY SSF53335 14 117 8.04E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 SUPERFAMILY SSF53335 221 320 8.04E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 Gene3D G3DSA:1.10.150.170 117 223 1.1E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 14 320 36.681 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 13 319 1.5E-97 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 Gene3D G3DSA:3.40.50.150 224 321 7.4E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 Gene3D G3DSA:3.40.50.150 14 114 7.4E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS15705 9406794356d37b6c3291c9507c2220a6 325 PANTHER PTHR11265 1 322 2.2E-131 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 SUPERFAMILY SSF64518 1 364 6.41E-51 T 22-04-2016 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 PRINTS PR00207 Flagellin signature 111 134 2.4E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 PRINTS PR00207 Flagellin signature 37 54 2.4E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 PRINTS PR00207 Flagellin signature 76 95 2.4E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 Pfam PF00700 Bacterial flagellin C-terminal helical region 542 626 2.2E-22 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 Gene3D G3DSA:1.20.1330.10 529 583 6.9E-45 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 Gene3D G3DSA:1.20.1330.10 54 173 6.9E-45 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 PANTHER PTHR30244 2 180 2.1E-85 T 22-04-2016 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 PANTHER PTHR30244 446 626 2.1E-85 T 22-04-2016 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 PANTHER PTHR30244:SF1 2 180 2.1E-85 T 22-04-2016 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 PANTHER PTHR30244:SF1 446 626 2.1E-85 T 22-04-2016 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 SUPERFAMILY SSF64518 358 626 8.63E-29 T 22-04-2016 RMET_RS10795 3254e0e8d7d5ceba6617ee3c0ff7060f 629 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.4E-31 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RMET_RS04905 fc8a846d4cc9f7a5213c02582fbf6fb2 213 SUPERFAMILY SSF52833 1 95 1.05E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS04905 fc8a846d4cc9f7a5213c02582fbf6fb2 213 PANTHER PTHR11260 2 211 1.0E-25 T 22-04-2016 RMET_RS04905 fc8a846d4cc9f7a5213c02582fbf6fb2 213 Gene3D G3DSA:3.40.30.10 1 86 2.4E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS04905 fc8a846d4cc9f7a5213c02582fbf6fb2 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 75 1.2E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS04905 fc8a846d4cc9f7a5213c02582fbf6fb2 213 SUPERFAMILY SSF47616 72 202 2.27E-21 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS04905 fc8a846d4cc9f7a5213c02582fbf6fb2 213 Gene3D G3DSA:1.20.1050.10 87 210 2.7E-37 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS04905 fc8a846d4cc9f7a5213c02582fbf6fb2 213 Pfam PF13410 Glutathione S-transferase, C-terminal domain 120 180 1.9E-6 T 22-04-2016 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 142 2.8E-10 T 22-04-2016 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 SMART SM00853 468 611 2.6E-56 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 SUPERFAMILY SSF54211 203 338 3.79E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 Gene3D G3DSA:3.30.565.10 18 225 2.4E-69 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 SUPERFAMILY SSF55874 17 213 2.62E-52 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 221 337 2.0E-37 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 17 651 28.163 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 Pfam PF08676 MutL C terminal dimerisation domain 464 611 1.5E-49 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 18 318 1.4E-89 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 SMART SM01340 220 338 3.1E-57 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 109 115 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 SUPERFAMILY SSF118116 463 653 6.02E-61 T 22-04-2016 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 PANTHER PTHR10073 19 651 1.3E-157 T 22-04-2016 RMET_RS14575 cd89ce2be7ab272d93f2b72d8abc4594 655 Gene3D G3DSA:3.30.230.10 226 336 1.0E-36 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS17055 d6f7c6d623e91a1ce660aa5ed10c9669 432 Pfam PF01936 NYN domain 11 144 8.2E-30 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type RMET_RS17055 d6f7c6d623e91a1ce660aa5ed10c9669 432 Pfam PF12872 OST-HTH/LOTUS domain 174 242 1.3E-16 T 22-04-2016 IPR025605 OST-HTH/LOTUS domain RMET_RS17055 d6f7c6d623e91a1ce660aa5ed10c9669 432 SUPERFAMILY SSF81995 259 314 3.14E-5 T 22-04-2016 RMET_RS17055 d6f7c6d623e91a1ce660aa5ed10c9669 432 Gene3D G3DSA:3.40.50.1010 6 145 4.2E-29 T 22-04-2016 IPR029060 PIN domain-like RMET_RS17055 d6f7c6d623e91a1ce660aa5ed10c9669 432 PANTHER PTHR35811:SF1 11 265 8.2E-63 T 22-04-2016 RMET_RS17055 d6f7c6d623e91a1ce660aa5ed10c9669 432 PANTHER PTHR35811 11 265 8.2E-63 T 22-04-2016 RMET_RS06265 2a2972943160231234f06433ca1ba8cb 336 SUPERFAMILY SSF56349 120 311 9.42E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS06265 2a2972943160231234f06433ca1ba8cb 336 PANTHER PTHR30349:SF5 14 312 1.8E-54 T 22-04-2016 RMET_RS06265 2a2972943160231234f06433ca1ba8cb 336 Gene3D G3DSA:1.10.150.130 13 98 1.7E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS06265 2a2972943160231234f06433ca1ba8cb 336 Pfam PF00589 Phage integrase family 125 297 1.2E-32 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06265 2a2972943160231234f06433ca1ba8cb 336 SUPERFAMILY SSF47823 12 98 3.53E-6 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RMET_RS06265 2a2972943160231234f06433ca1ba8cb 336 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 95 6.7E-10 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS06265 2a2972943160231234f06433ca1ba8cb 336 Gene3D G3DSA:1.10.443.10 125 307 2.0E-41 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06265 2a2972943160231234f06433ca1ba8cb 336 PANTHER PTHR30349 14 312 1.8E-54 T 22-04-2016 RMET_RS03670 7fb45c6f92d70a278154538d080651ab 482 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 393 413 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RMET_RS03670 7fb45c6f92d70a278154538d080651ab 482 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 71 466 2.3E-96 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RMET_RS03670 7fb45c6f92d70a278154538d080651ab 482 PANTHER PTHR11119:SF49 20 470 8.2E-176 T 22-04-2016 RMET_RS03670 7fb45c6f92d70a278154538d080651ab 482 PANTHER PTHR11119 20 470 8.2E-176 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS03670 7fb45c6f92d70a278154538d080651ab 482 Pfam PF00860 Permease family 75 446 1.2E-85 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 PANTHER PTHR35008 352 487 6.6E-202 T 22-04-2016 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 PANTHER PTHR35008 64 332 6.6E-202 T 22-04-2016 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Gene3D G3DSA:1.10.3820.10 335 336 2.5E-5 T 22-04-2016 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 SUPERFAMILY SSF46626 612 712 2.54E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Gene3D G3DSA:1.10.760.10 504 593 7.4E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 SUPERFAMILY SSF46626 363 455 1.4E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Gene3D G3DSA:1.10.760.10 62 164 8.8E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Gene3D G3DSA:1.10.760.10 208 317 5.3E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 SUPERFAMILY SSF46626 51 189 7.34E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 363 443 7.8E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Pfam PF00034 Cytochrome c 65 164 1.5E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Pfam PF00034 Cytochrome c 615 703 2.3E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 SUPERFAMILY SSF46626 212 347 7.62E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 SUPERFAMILY SSF46626 511 592 4.0E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 PANTHER PTHR35008:SF3 352 487 6.6E-202 T 22-04-2016 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 PANTHER PTHR35008:SF3 64 332 6.6E-202 T 22-04-2016 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Gene3D G3DSA:1.10.760.10 617 727 1.3E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10820 f6651da1f5bdfab445bb884754132f86 728 Gene3D G3DSA:1.10.760.10 363 475 1.4E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16005 1b7e5a74460e1fc8a19db8831aca9eca 311 Pfam PF14378 PAP2 superfamily 112 291 2.2E-35 T 22-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 RMET_RS16005 1b7e5a74460e1fc8a19db8831aca9eca 311 Gene3D G3DSA:1.20.144.10 191 293 9.8E-5 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 Pfam PF11870 Domain of unknown function (DUF3390) 393 467 9.6E-13 T 22-04-2016 IPR024569 4Fe-4S binding protein, C-terminal RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 PANTHER PTHR32479 55 468 1.0E-155 T 22-04-2016 RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 Gene3D G3DSA:3.40.50.10420 62 125 4.4E-44 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 Gene3D G3DSA:3.40.50.10420 187 293 4.4E-44 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 17 452 1.4E-135 T 22-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 SUPERFAMILY SSF100950 132 293 4.6E-35 T 22-04-2016 RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 SUPERFAMILY SSF100950 61 86 4.6E-35 T 22-04-2016 RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 Pfam PF13183 4Fe-4S dicluster domain 307 374 1.7E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 PANTHER PTHR32479:SF10 55 468 1.0E-155 T 22-04-2016 RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 67 292 2.3E-51 T 22-04-2016 IPR003741 LUD domain RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 SUPERFAMILY SSF54862 308 401 2.05E-14 T 22-04-2016 RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 Gene3D G3DSA:1.10.1060.10 305 397 2.1E-12 T 22-04-2016 RMET_RS06090 a2d8767d8f0d600afc708d0054d3ee5a 470 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 310 321 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS07175 05e722ad9b7c4a07f13042e985f16b13 399 SUPERFAMILY SSF53383 2 396 2.06E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS07175 05e722ad9b7c4a07f13042e985f16b13 399 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 395 3.5E-180 T 22-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 RMET_RS07175 05e722ad9b7c4a07f13042e985f16b13 399 PANTHER PTHR11751:SF354 12 394 1.5E-115 T 22-04-2016 RMET_RS07175 05e722ad9b7c4a07f13042e985f16b13 399 Pfam PF00155 Aminotransferase class I and II 31 388 1.6E-41 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS07175 05e722ad9b7c4a07f13042e985f16b13 399 Gene3D G3DSA:3.40.640.10 42 285 2.2E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS07175 05e722ad9b7c4a07f13042e985f16b13 399 Gene3D G3DSA:3.90.1150.10 286 398 1.4E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS07175 05e722ad9b7c4a07f13042e985f16b13 399 PANTHER PTHR11751 12 394 1.5E-115 T 22-04-2016 RMET_RS09380 80047735867bd69263352905974e1137 450 Pfam PF01425 Amidase 28 433 4.6E-84 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09380 80047735867bd69263352905974e1137 450 PANTHER PTHR11895 4 450 2.9E-106 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09380 80047735867bd69263352905974e1137 450 Gene3D G3DSA:3.90.1300.10 4 445 5.2E-112 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09380 80047735867bd69263352905974e1137 450 SUPERFAMILY SSF75304 4 444 1.05E-111 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09380 80047735867bd69263352905974e1137 450 ProSitePatterns PS00571 Amidases signature. 151 182 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS01780 92271b63dbb0db6eb421b0c1de5e0b28 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 2.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS01780 92271b63dbb0db6eb421b0c1de5e0b28 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 2.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS01780 92271b63dbb0db6eb421b0c1de5e0b28 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 80 3.9E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS01780 92271b63dbb0db6eb421b0c1de5e0b28 230 SUPERFAMILY SSF48498 107 221 3.41E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS01780 92271b63dbb0db6eb421b0c1de5e0b28 230 Gene3D G3DSA:1.10.357.10 18 223 1.2E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS01780 92271b63dbb0db6eb421b0c1de5e0b28 230 SUPERFAMILY SSF46689 23 99 1.03E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS01780 92271b63dbb0db6eb421b0c1de5e0b28 230 PANTHER PTHR30055 9 186 1.8E-24 T 22-04-2016 RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 PANTHER PTHR11088 3 296 1.1E-108 T 22-04-2016 RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 Gene3D G3DSA:3.40.50.300 6 174 3.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 Pfam PF01715 IPP transferase 43 294 2.7E-88 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 311 29.637 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 Gene3D G3DSA:1.10.287.890 210 291 6.0E-32 T 22-04-2016 RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 SUPERFAMILY SSF52540 10 154 4.48E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 292 3.7E-92 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 SUPERFAMILY SSF52540 187 272 8.87E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14580 687fa5d1c3fc125d9085164a1d571cda 315 SUPERFAMILY SSF52540 6 109 8.87E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 Gene3D G3DSA:3.40.50.300 29 55 6.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 15 193 8.2E-72 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 Gene3D G3DSA:3.30.63.10 56 96 6.6E-28 T 22-04-2016 RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 SMART SM00072 14 196 4.7E-60 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 PANTHER PTHR23117 6 216 1.2E-85 T 22-04-2016 RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 ProSitePatterns PS00856 Guanylate kinase-like signature. 49 66 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 SUPERFAMILY SSF52540 13 198 1.07E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 Hamap MF_00328 Guanylate kinase [gmk]. 13 196 35.309 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 Pfam PF00625 Guanylate kinase 17 194 3.4E-50 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 Gene3D G3DSA:3.40.50.300 13 28 5.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04300 6cf04d68d0cb5cbe8aea57004d99e64e 216 Gene3D G3DSA:3.40.50.300 97 209 5.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 Gene3D G3DSA:1.10.45.10 430 469 3.8E-13 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 Gene3D G3DSA:3.30.465.10 98 218 8.0E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 PANTHER PTHR11748 1 470 4.7E-184 T 22-04-2016 RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 SUPERFAMILY SSF56176 5 217 6.54E-74 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 PANTHER PTHR11748:SF76 1 470 4.7E-184 T 22-04-2016 RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 Gene3D G3DSA:3.30.43.10 3 97 1.3E-25 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 Pfam PF01565 FAD binding domain 42 180 3.4E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 SUPERFAMILY SSF55103 222 470 8.83E-54 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS08965 c88d857525cc0019d7e70b4f49234468 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 469 4.8E-50 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RMET_RS15455 3e039d84a0c62e374a19a466185438f3 395 PIRSF PIRSF000355 47 395 1.5E-131 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RMET_RS15455 3e039d84a0c62e374a19a466185438f3 395 SUPERFAMILY SSF47240 56 366 9.07E-96 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS15455 3e039d84a0c62e374a19a466185438f3 395 PANTHER PTHR23409:SF18 46 390 1.7E-147 T 22-04-2016 RMET_RS15455 3e039d84a0c62e374a19a466185438f3 395 Pfam PF00268 Ribonucleotide reductase, small chain 75 362 4.1E-81 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RMET_RS15455 3e039d84a0c62e374a19a466185438f3 395 PANTHER PTHR23409 46 390 1.7E-147 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RMET_RS15455 3e039d84a0c62e374a19a466185438f3 395 Gene3D G3DSA:1.10.620.20 57 370 1.4E-110 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS01580 ebe8144613a19e64032e7e54b858b1c9 190 PANTHER PTHR11776 17 190 3.1E-77 T 22-04-2016 RMET_RS01580 ebe8144613a19e64032e7e54b858b1c9 190 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 18 187 37.387 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RMET_RS01580 ebe8144613a19e64032e7e54b858b1c9 190 PANTHER PTHR11776:SF0 17 190 3.1E-77 T 22-04-2016 RMET_RS01580 ebe8144613a19e64032e7e54b858b1c9 190 Pfam PF00156 Phosphoribosyl transferase domain 42 167 8.2E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RMET_RS01580 ebe8144613a19e64032e7e54b858b1c9 190 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 18 186 4.3E-66 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RMET_RS01580 ebe8144613a19e64032e7e54b858b1c9 190 Gene3D G3DSA:3.40.50.2020 18 188 1.3E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS01580 ebe8144613a19e64032e7e54b858b1c9 190 SUPERFAMILY SSF53271 20 188 4.85E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS07285 72f2dd1e4f4776c1c938d822534c735c 150 Gene3D G3DSA:3.10.129.10 5 146 6.4E-57 T 22-04-2016 IPR029069 HotDog domain RMET_RS07285 72f2dd1e4f4776c1c938d822534c735c 150 PANTHER PTHR30272 6 149 9.8E-75 T 22-04-2016 RMET_RS07285 72f2dd1e4f4776c1c938d822534c735c 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 6 147 35.602 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RMET_RS07285 72f2dd1e4f4776c1c938d822534c735c 150 Pfam PF07977 FabA-like domain 15 140 3.5E-35 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RMET_RS07285 72f2dd1e4f4776c1c938d822534c735c 150 SUPERFAMILY SSF54637 5 145 8.81E-48 T 22-04-2016 IPR029069 HotDog domain RMET_RS07285 72f2dd1e4f4776c1c938d822534c735c 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 6 144 8.3E-61 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 78 1617 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 SUPERFAMILY SSF51735 1097 1295 3.02E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 SUPERFAMILY SSF51735 959 1061 3.02E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 Gene3D G3DSA:3.40.50.720 1118 1212 9.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 Gene3D G3DSA:3.40.50.720 956 1067 9.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PANTHER PTHR11606 14 151 0.0 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PANTHER PTHR11606 220 569 0.0 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PANTHER PTHR11606 1136 1381 0.0 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PANTHER PTHR11606 683 1111 0.0 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PANTHER PTHR11606:SF1 14 151 0.0 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PANTHER PTHR11606:SF1 220 569 0.0 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PANTHER PTHR11606:SF1 1136 1381 0.0 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PANTHER PTHR11606:SF1 683 1111 0.0 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 SUPERFAMILY SSF53223 769 955 4.03E-26 T 22-04-2016 RMET_RS05950 c985d203fb4215be623c1630f450c3e8 1623 PIRSF PIRSF036761 5 1623 0.0 T 22-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 RMET_RS13765 70ec2301dde1ad3ac7ff79bfc401cd00 190 PANTHER PTHR30327 6 190 3.7E-63 T 22-04-2016 RMET_RS13765 70ec2301dde1ad3ac7ff79bfc401cd00 190 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 8 190 39.004 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 RMET_RS13765 70ec2301dde1ad3ac7ff79bfc401cd00 190 PANTHER PTHR30327:SF1 6 190 3.7E-63 T 22-04-2016 RMET_RS13765 70ec2301dde1ad3ac7ff79bfc401cd00 190 Pfam PF02622 Uncharacterized ACR, COG1678 19 177 1.2E-50 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 RMET_RS13765 70ec2301dde1ad3ac7ff79bfc401cd00 190 SUPERFAMILY SSF143456 8 190 1.44E-66 T 22-04-2016 RMET_RS13765 70ec2301dde1ad3ac7ff79bfc401cd00 190 Gene3D G3DSA:3.40.1740.10 134 180 1.7E-35 T 22-04-2016 RMET_RS13765 70ec2301dde1ad3ac7ff79bfc401cd00 190 Gene3D G3DSA:3.40.1740.10 5 47 1.7E-35 T 22-04-2016 RMET_RS13765 70ec2301dde1ad3ac7ff79bfc401cd00 190 Gene3D G3DSA:3.30.70.1300 48 133 2.0E-31 T 22-04-2016 RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 Gene3D G3DSA:3.40.50.300 220 489 2.7E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 5 488 1.1E-222 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 PANTHER PTHR30258:SF9 8 491 2.2E-224 T 22-04-2016 RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 PANTHER PTHR30258 8 491 2.2E-224 T 22-04-2016 RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 SMART SM00382 242 368 2.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 SUPERFAMILY SSF160246 5 67 5.49E-7 T 22-04-2016 RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 309 323 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 SUPERFAMILY SSF52540 91 488 4.83E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 Pfam PF00437 Type II/IV secretion system protein 118 381 3.3E-84 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS17045 f7a7fdfb310f3ec84abe8b5a92ca237d 491 Gene3D G3DSA:3.30.450.90 85 214 2.7E-52 T 22-04-2016 RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 PANTHER PTHR21000 4 557 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 SUPERFAMILY SSF143975 3 378 9.29E-134 T 22-04-2016 RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 Pfam PF00920 Dehydratase family 35 554 2.7E-204 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 PANTHER PTHR21000:SF5 4 557 0.0 T 22-04-2016 RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 43.684 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 SUPERFAMILY SSF52016 380 557 2.12E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 3.7E-224 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS14070 eeb8cc7e3b989131dd2569b9870e41a0 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 Pfam PF03054 tRNA methyl transferase 4 358 4.5E-134 T 22-04-2016 RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 PANTHER PTHR11933 1 359 3.4E-183 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 Gene3D G3DSA:2.30.30.280 211 279 4.1E-32 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 Gene3D G3DSA:3.40.50.620 2 209 4.9E-95 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 359 39.093 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 Gene3D G3DSA:2.40.30.10 280 358 4.6E-29 T 22-04-2016 RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 358 2.7E-131 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 SUPERFAMILY SSF52402 2 242 2.43E-56 T 22-04-2016 RMET_RS14830 01af5e90d0ac1fdf37438589ad98ad5f 359 PANTHER PTHR11933:SF10 1 359 3.4E-183 T 22-04-2016 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 SUPERFAMILY SSF81442 43 559 2.22E-180 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PANTHER PTHR10422:SF26 33 613 0.0 T 22-04-2016 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PANTHER PTHR10422 33 613 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 2.2E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 646 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 Gene3D G3DSA:1.20.210.10 39 587 2.1E-187 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS04775 ef12a0115e14b4ff482fb8292956de6e 657 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 1.0E-138 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS02700 63431a4eeb9c534ce94d9a49f35e1407 69 SUPERFAMILY SSF158997 1 52 8.5E-22 T 22-04-2016 RMET_RS02700 63431a4eeb9c534ce94d9a49f35e1407 69 Gene3D G3DSA:2.20.25.10 8 52 4.2E-27 T 22-04-2016 RMET_RS02700 63431a4eeb9c534ce94d9a49f35e1407 69 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.393 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RMET_RS02700 63431a4eeb9c534ce94d9a49f35e1407 69 Pfam PF03966 Trm112p-like protein 2 41 2.7E-12 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RMET_RS02700 63431a4eeb9c534ce94d9a49f35e1407 69 PANTHER PTHR33505 1 53 9.7E-26 T 22-04-2016 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 SUPERFAMILY SSF52343 192 335 4.19E-35 T 22-04-2016 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 80 4.0E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 Pfam PF00175 Oxidoreductase NAD-binding domain 213 318 6.7E-16 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 Gene3D G3DSA:3.10.20.30 2 91 3.9E-25 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 SUPERFAMILY SSF63380 105 202 1.07E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 237 246 4.4E-28 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 4.4E-28 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 305 313 4.4E-28 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 4.4E-28 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 205 4.4E-28 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 231 4.4E-28 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 SUPERFAMILY SSF54292 1 89 5.64E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 PANTHER PTHR19370:SF32 27 354 5.3E-74 T 22-04-2016 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 PANTHER PTHR19370 27 354 5.3E-74 T 22-04-2016 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 Pfam PF00970 Oxidoreductase FAD-binding domain 107 201 6.0E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 Gene3D G3DSA:3.40.50.80 206 338 1.7E-34 T 22-04-2016 RMET_RS06690 cfa57025ff9da08a3dd629ad2adfa436 354 Gene3D G3DSA:2.40.30.10 105 202 3.4E-28 T 22-04-2016 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 SUPERFAMILY SSF46894 152 208 7.48E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 PANTHER PTHR26402 3 207 1.5E-44 T 22-04-2016 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 SMART SM00448 3 118 3.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 Gene3D G3DSA:1.10.10.10 161 208 5.9E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 SMART SM00421 153 210 1.2E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.7E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.7E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.7E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 Gene3D G3DSA:3.40.50.2300 2 160 6.8E-30 T 22-04-2016 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 207 2.3E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 SUPERFAMILY SSF52172 1 133 1.71E-25 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS10810 1af30daf20254a5db46cfd360a61c9a2 213 Pfam PF00072 Response regulator receiver domain 5 118 5.8E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS11890 0ccf411f440fbd3af29860bec5be119f 408 Pfam PF07690 Major Facilitator Superfamily 24 322 1.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS11890 0ccf411f440fbd3af29860bec5be119f 408 Gene3D G3DSA:1.20.1250.20 17 201 8.0E-11 T 22-04-2016 RMET_RS11890 0ccf411f440fbd3af29860bec5be119f 408 Gene3D G3DSA:1.20.1250.20 221 401 5.5E-10 T 22-04-2016 RMET_RS11890 0ccf411f440fbd3af29860bec5be119f 408 SUPERFAMILY SSF103473 13 402 5.75E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS11890 0ccf411f440fbd3af29860bec5be119f 408 PANTHER PTHR23534 1 408 7.3E-69 T 22-04-2016 RMET_RS11090 4c9d0aa0819c0abe7b42b2e898d46ef4 241 SUPERFAMILY SSF53098 1 175 1.18E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS11090 4c9d0aa0819c0abe7b42b2e898d46ef4 241 SMART SM00479 2 174 1.8E-50 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RMET_RS11090 4c9d0aa0819c0abe7b42b2e898d46ef4 241 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 213 3.8E-65 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS11090 4c9d0aa0819c0abe7b42b2e898d46ef4 241 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 231 8.9E-89 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS11090 4c9d0aa0819c0abe7b42b2e898d46ef4 241 PANTHER PTHR30231:SF0 1 241 2.1E-95 T 22-04-2016 RMET_RS11090 4c9d0aa0819c0abe7b42b2e898d46ef4 241 PANTHER PTHR30231 1 241 2.1E-95 T 22-04-2016 RMET_RS11090 4c9d0aa0819c0abe7b42b2e898d46ef4 241 Pfam PF00929 Exonuclease 4 165 1.6E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RMET_RS11090 4c9d0aa0819c0abe7b42b2e898d46ef4 241 Gene3D G3DSA:3.30.420.10 1 175 3.3E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS13450 e5e597b5add59886c5c061a7bf40b04f 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 122 3.1E-35 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RMET_RS13450 e5e597b5add59886c5c061a7bf40b04f 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 127 2.1E-50 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RMET_RS13450 e5e597b5add59886c5c061a7bf40b04f 134 Pfam PF03061 Thioesterase superfamily 18 103 6.1E-18 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS13450 e5e597b5add59886c5c061a7bf40b04f 134 Gene3D G3DSA:3.10.129.10 2 132 2.5E-50 T 22-04-2016 IPR029069 HotDog domain RMET_RS13450 e5e597b5add59886c5c061a7bf40b04f 134 PANTHER PTHR31793 2 131 2.3E-45 T 22-04-2016 RMET_RS13450 e5e597b5add59886c5c061a7bf40b04f 134 PANTHER PTHR31793:SF9 2 131 2.3E-45 T 22-04-2016 RMET_RS13450 e5e597b5add59886c5c061a7bf40b04f 134 PIRSF PIRSF003230 1 134 6.0E-46 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RMET_RS13450 e5e597b5add59886c5c061a7bf40b04f 134 SUPERFAMILY SSF54637 2 131 5.87E-42 T 22-04-2016 IPR029069 HotDog domain RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 Gene3D G3DSA:3.30.300.30 441 543 2.7E-29 T 22-04-2016 RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 533 2.2E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 PANTHER PTHR24095 34 545 2.2E-156 T 22-04-2016 RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 32 541 9.1E-241 T 22-04-2016 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 SUPERFAMILY SSF56801 28 545 5.1E-145 T 22-04-2016 RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 Gene3D G3DSA:2.30.38.10 368 440 1.2E-19 T 22-04-2016 RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 Gene3D G3DSA:3.40.50.980 206 367 2.2E-35 T 22-04-2016 RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 Gene3D G3DSA:3.40.50.980 45 205 1.5E-33 T 22-04-2016 RMET_RS06180 682aaf22f9445a44ef22f6ed4edc2f0b 549 Pfam PF00501 AMP-binding enzyme 48 446 5.6E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 Gene3D G3DSA:2.40.30.10 328 432 2.0E-10 T 22-04-2016 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 11 430 6.6E-162 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 SUPERFAMILY SSF52540 8 224 4.64E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 SUPERFAMILY SSF50465 328 431 1.01E-31 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 Gene3D G3DSA:3.40.50.300 3 224 7.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 PANTHER PTHR23115 12 323 1.8E-59 T 22-04-2016 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 SUPERFAMILY SSF50447 234 323 1.77E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 PRINTS PR00315 GTP-binding elongation factor signature 153 162 6.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 PRINTS PR00315 GTP-binding elongation factor signature 92 102 6.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 PRINTS PR00315 GTP-binding elongation factor signature 108 119 6.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 PRINTS PR00315 GTP-binding elongation factor signature 72 80 6.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 Gene3D G3DSA:2.40.30.10 234 323 4.8E-18 T 22-04-2016 RMET_RS14110 54dfe94b5de414c3b8be8d25fffcd410 434 Pfam PF00009 Elongation factor Tu GTP binding domain 11 204 2.1E-36 T 22-04-2016 RMET_RS03480 0584fe2b13afb4e9c2edc6483bcd50c1 231 Gene3D G3DSA:1.10.3720.10 16 226 1.3E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03480 0584fe2b13afb4e9c2edc6483bcd50c1 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 222 1.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03480 0584fe2b13afb4e9c2edc6483bcd50c1 231 PANTHER PTHR30085 11 231 5.3E-71 T 22-04-2016 RMET_RS03480 0584fe2b13afb4e9c2edc6483bcd50c1 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 121 2.2E-18 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RMET_RS03480 0584fe2b13afb4e9c2edc6483bcd50c1 231 SUPERFAMILY SSF161098 16 212 2.62E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03480 0584fe2b13afb4e9c2edc6483bcd50c1 231 PANTHER PTHR30085:SF1 11 231 5.3E-71 T 22-04-2016 RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 Pfam PF08447 PAS fold 258 343 2.7E-19 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 PANTHER PTHR24423 203 405 7.0E-24 T 22-04-2016 RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 SMART SM00091 235 303 6.2E-6 T 22-04-2016 IPR000014 PAS domain RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 SMART SM00091 363 428 3.1 T 22-04-2016 IPR000014 PAS domain RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 SUPERFAMILY SSF55785 243 353 1.22E-21 T 22-04-2016 IPR000014 PAS domain RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 SMART SM00086 309 351 4.9E-5 T 22-04-2016 IPR001610 PAC motif RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 SUPERFAMILY SSF55785 347 415 3.14E-12 T 22-04-2016 IPR000014 PAS domain RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 232 358 3.0E-11 T 22-04-2016 IPR000014 PAS domain RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 Gene3D G3DSA:3.30.450.20 357 414 2.4E-11 T 22-04-2016 RMET_RS13365 30a1239caae16ee637f5ad1399a6d919 444 Gene3D G3DSA:3.30.450.20 222 356 5.7E-29 T 22-04-2016 RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 Gene3D G3DSA:1.10.10.10 10 80 5.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 PANTHER PTHR11751:SF386 89 472 3.8E-100 T 22-04-2016 RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 SMART SM00345 20 79 2.2E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 Gene3D G3DSA:3.90.1150.10 367 459 1.7E-8 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 3.3E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 Gene3D G3DSA:3.40.640.10 146 364 1.2E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 SUPERFAMILY SSF46785 10 83 3.45E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 Pfam PF00155 Aminotransferase class I and II 126 463 2.7E-39 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 PANTHER PTHR11751 89 472 3.8E-100 T 22-04-2016 RMET_RS01040 4bf7fe9f3a66ca0138e1e9b62688caaf 481 SUPERFAMILY SSF53383 116 469 2.29E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS10635 940adec43d80df9e724f13de6d226bc5 322 PANTHER PTHR10277 4 304 2.3E-112 T 22-04-2016 RMET_RS10635 940adec43d80df9e724f13de6d226bc5 322 Gene3D G3DSA:3.20.20.70 12 297 2.3E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS10635 940adec43d80df9e724f13de6d226bc5 322 SUPERFAMILY SSF51569 11 303 2.2E-73 T 22-04-2016 RMET_RS10635 940adec43d80df9e724f13de6d226bc5 322 PANTHER PTHR10277:SF1 4 304 2.3E-112 T 22-04-2016 RMET_RS10635 940adec43d80df9e724f13de6d226bc5 322 Pfam PF00682 HMGL-like 13 284 4.2E-45 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RMET_RS10800 a453c0d6414c2c30f89af9e4fa67a248 581 Gene3D G3DSA:3.90.1310.10 155 250 4.4E-23 T 22-04-2016 RMET_RS10800 a453c0d6414c2c30f89af9e4fa67a248 581 PANTHER PTHR30627:SF1 25 574 9.1E-147 T 22-04-2016 RMET_RS10800 a453c0d6414c2c30f89af9e4fa67a248 581 Pfam PF03717 Penicillin-binding Protein dimerisation domain 84 230 5.4E-15 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RMET_RS10800 a453c0d6414c2c30f89af9e4fa67a248 581 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 559 4.5E-50 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RMET_RS10800 a453c0d6414c2c30f89af9e4fa67a248 581 Gene3D G3DSA:3.40.710.10 251 565 2.6E-71 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS10800 a453c0d6414c2c30f89af9e4fa67a248 581 SUPERFAMILY SSF56519 81 243 2.22E-35 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RMET_RS10800 a453c0d6414c2c30f89af9e4fa67a248 581 SUPERFAMILY SSF56601 196 574 1.13E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS10800 a453c0d6414c2c30f89af9e4fa67a248 581 PANTHER PTHR30627 25 574 9.1E-147 T 22-04-2016 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 SUPERFAMILY SSF52172 11 206 5.12E-36 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 SMART SM00448 9 120 3.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 Pfam PF02954 Bacterial regulatory protein, Fis family 495 534 1.6E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 PANTHER PTHR32071:SF28 11 415 2.6E-188 T 22-04-2016 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 Gene3D G3DSA:1.10.8.60 335 405 2.6E-22 T 22-04-2016 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 PANTHER PTHR32071 451 547 2.6E-188 T 22-04-2016 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 Gene3D G3DSA:3.40.50.300 162 334 2.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 248 263 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 Gene3D G3DSA:1.10.10.60 490 533 5.9E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 SUPERFAMILY SSF46689 485 537 5.38E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 SUPERFAMILY SSF46689 377 419 5.38E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 Pfam PF00072 Response regulator receiver domain 11 120 1.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 Pfam PF00158 Sigma-54 interaction domain 164 328 1.2E-63 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 SUPERFAMILY SSF52540 164 404 8.04E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 PANTHER PTHR32071:SF28 451 547 2.6E-188 T 22-04-2016 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 376 385 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 SMART SM00382 182 326 3.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 Gene3D G3DSA:3.40.50.2300 11 131 7.9E-32 T 22-04-2016 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 PANTHER PTHR32071 11 415 2.6E-188 T 22-04-2016 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 518 538 4.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS15470 e8bdaefed19bcdce9ef99756da343289 547 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 501 518 4.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS18105 30d8ff9889675ddf73117c08aa55e101 323 PANTHER PTHR30349:SF32 8 323 5.4E-79 T 22-04-2016 RMET_RS18105 30d8ff9889675ddf73117c08aa55e101 323 SUPERFAMILY SSF53850 105 285 1.41E-8 T 22-04-2016 RMET_RS18105 30d8ff9889675ddf73117c08aa55e101 323 PIRSF PIRSF017082 1 323 7.0E-72 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS18105 30d8ff9889675ddf73117c08aa55e101 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 319 2.0E-82 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS18105 30d8ff9889675ddf73117c08aa55e101 323 PANTHER PTHR30349 8 323 5.4E-79 T 22-04-2016 RMET_RS03485 38f910df836a747e9aa3bdd05c9bb91c 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 2.9E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03485 38f910df836a747e9aa3bdd05c9bb91c 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 116 1.9E-27 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RMET_RS03485 38f910df836a747e9aa3bdd05c9bb91c 230 Gene3D G3DSA:1.10.3720.10 22 223 1.3E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03485 38f910df836a747e9aa3bdd05c9bb91c 230 SUPERFAMILY SSF161098 21 208 3.14E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03485 38f910df836a747e9aa3bdd05c9bb91c 230 PANTHER PTHR30614 1 228 1.1E-76 T 22-04-2016 RMET_RS06135 ce939cd0174bc1afbad81942dbdbf48b 249 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 223 2.6E-54 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RMET_RS06135 ce939cd0174bc1afbad81942dbdbf48b 249 PANTHER PTHR30098 23 241 3.2E-63 T 22-04-2016 RMET_RS06135 ce939cd0174bc1afbad81942dbdbf48b 249 SUPERFAMILY SSF55729 2 225 3.71E-84 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS06135 ce939cd0174bc1afbad81942dbdbf48b 249 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 249 97.177 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RMET_RS06135 ce939cd0174bc1afbad81942dbdbf48b 249 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 211 4.4E-70 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 PIRSF PIRSF001594 1 1167 0.0 T 22-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Gene3D G3DSA:3.30.1490.20 135 206 5.5E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Pfam PF00682 HMGL-like 551 822 3.0E-29 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 SUPERFAMILY SSF56059 88 337 1.24E-61 T 22-04-2016 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Pfam PF02785 Biotin carboxylase C-terminal domain 361 468 3.9E-33 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 115 1.3E-40 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 SUPERFAMILY SSF89000 851 1028 2.16E-50 T 22-04-2016 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Gene3D G3DSA:2.40.50.100 1091 1166 1.7E-24 T 22-04-2016 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Gene3D G3DSA:3.20.20.70 528 837 1.4E-135 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 9 1165 0.0 T 22-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 SUPERFAMILY SSF52440 4 118 9.35E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Gene3D G3DSA:3.40.50.20 6 134 5.1E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Gene3D G3DSA:1.10.10.60 969 1005 2.2E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 PANTHER PTHR18866:SF103 5 1165 0.0 T 22-04-2016 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 326 2.0E-67 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Gene3D G3DSA:3.30.470.20 209 475 1.2E-93 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Gene3D G3DSA:3.10.600.10 1006 1079 2.2E-25 T 22-04-2016 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 SUPERFAMILY SSF51246 356 474 3.03E-37 T 22-04-2016 IPR011054 Rudiment single hybrid motif RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Pfam PF00364 Biotin-requiring enzyme 1100 1165 4.9E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 SUPERFAMILY SSF51230 1089 1165 2.49E-20 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 PANTHER PTHR18866 5 1165 0.0 T 22-04-2016 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 SUPERFAMILY SSF51569 543 854 1.45E-86 T 22-04-2016 RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 Pfam PF02436 Conserved carboxylase domain 846 1045 6.2E-67 T 22-04-2016 IPR003379 Carboxylase, conserved domain RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1122 1139 - T 22-04-2016 IPR001882 Biotin-binding site RMET_RS08240 71b92841a2eb4a8bf0a46aa8eae730e4 1167 SMART SM00878 361 468 9.7E-53 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 PANTHER PTHR10909 3 474 3.6E-193 T 22-04-2016 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 1.1E-25 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 35 156 7.4E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 3.7E-15 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 586 7.5E-27 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 Gene3D G3DSA:2.40.110.10 160 270 3.6E-26 T 22-04-2016 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 33 7.3E-14 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 Gene3D G3DSA:1.20.140.10 271 458 7.6E-52 T 22-04-2016 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 PANTHER PTHR10909:SF296 3 474 3.6E-193 T 22-04-2016 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 SUPERFAMILY SSF47203 288 457 1.34E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 SUPERFAMILY SSF56645 34 279 1.96E-60 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS03715 6f395edef31211b5bcdd4eebf88dba1f 594 Gene3D G3DSA:1.10.540.10 33 157 8.7E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 SUPERFAMILY SSF56281 1 461 8.78E-134 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 SMART SM00849 13 224 1.6E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 PANTHER PTHR11203:SF11 1 461 3.0E-118 T 22-04-2016 RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 Pfam PF00753 Metallo-beta-lactamase superfamily 11 197 2.6E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 391 454 5.4E-14 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 Gene3D G3DSA:3.60.15.10 134 262 2.8E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 Gene3D G3DSA:3.60.15.10 1 100 2.8E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 Pfam PF10996 Beta-Casp domain 252 377 1.6E-25 T 22-04-2016 IPR022712 Beta-Casp domain RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 SMART SM01027 252 377 9.2E-58 T 22-04-2016 IPR022712 Beta-Casp domain RMET_RS06380 6b479fae4f82d37cb27067aad0138be5 469 PANTHER PTHR11203 1 461 3.0E-118 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Gene3D G3DSA:3.30.70.20 216 269 1.0E-10 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Gene3D G3DSA:3.30.70.20 584 635 3.7E-15 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Pfam PF13187 4Fe-4S dicluster domain 594 641 8.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 375 386 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 595 606 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 222 233 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 626 637 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 PANTHER PTHR24960:SF43 587 718 6.0E-79 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 PANTHER PTHR24960:SF43 271 410 6.0E-79 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Gene3D G3DSA:3.30.70.20 343 384 3.6E-14 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Pfam PF00037 4Fe-4S binding domain 217 237 8.9E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Gene3D G3DSA:1.10.1060.10 385 411 2.8E-12 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Gene3D G3DSA:1.10.1060.10 498 499 2.8E-12 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Gene3D G3DSA:1.10.1060.10 636 672 1.6E-6 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 SUPERFAMILY SSF54862 586 710 1.85E-58 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 SUPERFAMILY SSF54862 217 396 1.85E-58 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 Pfam PF12838 4Fe-4S dicluster domain 343 389 6.8E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 PANTHER PTHR24960 587 718 6.0E-79 T 22-04-2016 RMET_RS13870 d307c32ff14a617d5d7f960901bb58e5 726 PANTHER PTHR24960 271 410 6.0E-79 T 22-04-2016 RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 PANTHER PTHR30537 1 308 2.7E-123 T 22-04-2016 RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 SUPERFAMILY SSF53850 91 295 2.48E-50 T 22-04-2016 RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 Gene3D G3DSA:3.40.190.10 178 258 3.1E-25 T 22-04-2016 RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 PANTHER PTHR30537:SF5 1 308 2.7E-123 T 22-04-2016 RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 Pfam PF03466 LysR substrate binding domain 90 291 1.3E-50 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 SUPERFAMILY SSF46785 2 112 1.17E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 Gene3D G3DSA:1.10.10.10 4 86 1.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03735 74141c0da8c15c6a7e434e24f93db3df 310 Gene3D G3DSA:3.40.190.10 93 177 1.1E-26 T 22-04-2016 RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 Gene3D G3DSA:1.10.10.10 153 230 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 SMART SM00448 4 114 3.7E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 Pfam PF00072 Response regulator receiver domain 6 114 1.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 229 3.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 PANTHER PTHR26402 4 232 1.4E-113 T 22-04-2016 RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 SUPERFAMILY SSF52172 2 125 8.82E-40 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 PANTHER PTHR26402:SF573 4 232 1.4E-113 T 22-04-2016 RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 SMART SM00862 153 229 1.3E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 Gene3D G3DSA:3.40.50.2300 2 152 3.3E-39 T 22-04-2016 RMET_RS08310 77ee098fd220e61be91cea4e8d834761 232 SUPERFAMILY SSF46894 137 230 1.05E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS03460 f9ffeff006ce8994d826eb40aaa53ef0 214 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 204 7.3E-44 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RMET_RS03460 f9ffeff006ce8994d826eb40aaa53ef0 214 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 14 214 29.902 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RMET_RS03460 f9ffeff006ce8994d826eb40aaa53ef0 214 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 14 213 2.7E-17 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RMET_RS03460 f9ffeff006ce8994d826eb40aaa53ef0 214 Gene3D G3DSA:2.50.20.10 29 214 1.9E-67 T 22-04-2016 RMET_RS03460 f9ffeff006ce8994d826eb40aaa53ef0 214 SUPERFAMILY SSF89392 30 214 2.9E-48 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RMET_RS03460 f9ffeff006ce8994d826eb40aaa53ef0 214 PANTHER PTHR35869 1 214 6.3E-39 T 22-04-2016 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 82 118 9.1E-13 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 Pfam PF13459 4Fe-4S single cluster domain 138 203 1.4E-5 T 22-04-2016 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 PIRSF PIRSF000309 1 232 3.7E-82 T 22-04-2016 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit MetaCyc: PWY-5382|MetaCyc: PWY-6758 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 SUPERFAMILY SSF54292 3 124 4.84E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 PANTHER PTHR11615:SF38 4 210 1.1E-37 T 22-04-2016 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 74 5.3E-14 T 22-04-2016 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 Gene3D G3DSA:3.10.20.30 2 59 5.1E-8 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 Gene3D G3DSA:3.30.70.20 137 203 2.1E-4 T 22-04-2016 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 SMART SM00929 82 122 1.9E-14 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RMET_RS07660 8cd2fa5c59d52fbc61c2798ca6254f87 236 PANTHER PTHR11615 4 210 1.1E-37 T 22-04-2016 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 247 263 8.2E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 155 174 8.2E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 8.2E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 272 287 8.2E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 302 321 8.2E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 193 212 8.2E-58 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 247 259 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 PANTHER PTHR11458 4 329 7.1E-185 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 Gene3D G3DSA:3.20.20.70 3 329 1.8E-152 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 SMART SM01004 4 328 8.3E-248 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 PIRSF PIRSF001415 1 330 1.2E-149 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 326 7.8E-142 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS16480 2e3729afacfbe7e07cb704bdfb966ca8 330 SUPERFAMILY SSF51569 3 329 2.93E-146 T 22-04-2016 RMET_RS00735 10579a183a3cd31278447c58644cb801 203 Pfam PF07021 Methionine biosynthesis protein MetW 13 200 3.0E-82 T 22-04-2016 IPR010743 Methionine biosynthesis MetW RMET_RS00735 10579a183a3cd31278447c58644cb801 203 PANTHER PTHR10108:SF831 9 176 5.6E-46 T 22-04-2016 RMET_RS00735 10579a183a3cd31278447c58644cb801 203 SUPERFAMILY SSF53335 13 187 1.42E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS00735 10579a183a3cd31278447c58644cb801 203 PANTHER PTHR10108 9 176 5.6E-46 T 22-04-2016 RMET_RS00735 10579a183a3cd31278447c58644cb801 203 Gene3D G3DSA:3.40.50.150 18 187 4.2E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS00735 10579a183a3cd31278447c58644cb801 203 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 13 200 9.3E-84 T 22-04-2016 IPR010743 Methionine biosynthesis MetW RMET_RS02215 8c710bcacfea81cbb14176c0eceb01fb 358 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 337 35.106 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RMET_RS02215 8c710bcacfea81cbb14176c0eceb01fb 358 PANTHER PTHR30004:SF5 3 349 3.3E-139 T 22-04-2016 RMET_RS02215 8c710bcacfea81cbb14176c0eceb01fb 358 Gene3D G3DSA:3.40.718.10 7 339 2.6E-125 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS02215 8c710bcacfea81cbb14176c0eceb01fb 358 SUPERFAMILY SSF53659 8 339 1.8E-103 T 22-04-2016 RMET_RS02215 8c710bcacfea81cbb14176c0eceb01fb 358 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 47 333 9.0E-107 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RMET_RS02215 8c710bcacfea81cbb14176c0eceb01fb 358 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 337 1.6E-122 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RMET_RS02215 8c710bcacfea81cbb14176c0eceb01fb 358 PANTHER PTHR30004 3 349 3.3E-139 T 22-04-2016 RMET_RS12330 2655ace4af6df433f3b547b53d681896 297 PANTHER PTHR24220 1 265 8.4E-99 T 22-04-2016 RMET_RS12330 2655ace4af6df433f3b547b53d681896 297 Gene3D G3DSA:3.40.50.300 1 220 1.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12330 2655ace4af6df433f3b547b53d681896 297 PANTHER PTHR24220:SF165 1 265 8.4E-99 T 22-04-2016 RMET_RS12330 2655ace4af6df433f3b547b53d681896 297 TIGRFAM TIGR01288 nodI: nodulation ABC transporter NodI 2 297 3.3E-137 T 22-04-2016 IPR005978 Nodulation ABC transporter, NodI GO:0005215|GO:0005524|GO:0006810|GO:0009877|GO:0016020 RMET_RS12330 2655ace4af6df433f3b547b53d681896 297 SMART SM00382 23 205 1.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12330 2655ace4af6df433f3b547b53d681896 297 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS12330 2655ace4af6df433f3b547b53d681896 297 SUPERFAMILY SSF52540 2 219 8.74E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12330 2655ace4af6df433f3b547b53d681896 297 Pfam PF00005 ABC transporter 14 157 9.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 1.6E-165 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 SMART SM00937 63 178 6.7E-64 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 Gene3D G3DSA:3.30.160.20 214 288 2.0E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 Gene3D G3DSA:1.20.58.410 7 93 4.3E-17 T 22-04-2016 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.855 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 Pfam PF03462 PCRF domain 13 203 3.1E-73 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 Pfam PF00472 RF-1 domain 214 321 2.1E-43 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 PANTHER PTHR11075 1 356 7.3E-176 T 22-04-2016 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 SUPERFAMILY SSF75620 12 353 6.8E-139 T 22-04-2016 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 PANTHER PTHR11075:SF9 1 356 7.3E-176 T 22-04-2016 RMET_RS16050 2b07cccc3f3ca32ea55c9b0531b95a05 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RMET_RS08790 2413a730416529f214145c36dc048c0b 403 PANTHER PTHR24023:SF593 49 390 5.4E-31 T 22-04-2016 RMET_RS08790 2413a730416529f214145c36dc048c0b 403 PANTHER PTHR24023 49 390 5.4E-31 T 22-04-2016 RMET_RS08790 2413a730416529f214145c36dc048c0b 403 Pfam PF02515 CoA-transferase family III 11 379 3.5E-124 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS08790 2413a730416529f214145c36dc048c0b 403 Gene3D G3DSA:3.30.1540.10 228 311 3.5E-32 T 22-04-2016 RMET_RS08790 2413a730416529f214145c36dc048c0b 403 Gene3D G3DSA:3.40.50.10540 312 403 3.0E-111 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS08790 2413a730416529f214145c36dc048c0b 403 Gene3D G3DSA:3.40.50.10540 7 222 3.0E-111 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS08790 2413a730416529f214145c36dc048c0b 403 SUPERFAMILY SSF89796 9 403 2.09E-131 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 Gene3D G3DSA:2.40.170.20 243 815 1.1E-72 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 SMART SM00965 48 99 2.2E-14 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 SUPERFAMILY SSF56935 127 815 2.88E-92 T 22-04-2016 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 PANTHER PTHR32552:SF0 58 815 1.5E-173 T 22-04-2016 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 Pfam PF07660 Secretin and TonB N terminus short domain 52 98 7.0E-10 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 Pfam PF00593 TonB dependent receptor 567 811 5.7E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 PANTHER PTHR32552 58 815 1.5E-173 T 22-04-2016 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 Pfam PF07715 TonB-dependent Receptor Plug Domain 144 241 3.5E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 Gene3D G3DSA:2.170.130.10 117 242 1.7E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS05625 581d7e1ef03a67e5721555e23aced424 815 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 142 810 2.5E-149 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RMET_RS16065 865757849c182a83be51b356b0361ae0 103 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 102 8.7E-46 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related RMET_RS16065 865757849c182a83be51b356b0361ae0 103 SUPERFAMILY SSF52833 1 102 3.42E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS16065 865757849c182a83be51b356b0361ae0 103 Pfam PF00462 Glutaredoxin 17 82 1.1E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RMET_RS16065 865757849c182a83be51b356b0361ae0 103 PIRSF PIRSF005894 1 103 1.1E-48 T 22-04-2016 IPR014434 Monothiol glutaredoxin RMET_RS16065 865757849c182a83be51b356b0361ae0 103 PANTHER PTHR10293 2 102 1.2E-64 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related RMET_RS16065 865757849c182a83be51b356b0361ae0 103 Gene3D G3DSA:3.40.30.10 8 102 6.7E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Pfam PF09334 tRNA synthetases class I (M) 44 177 1.1E-19 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 419 5.0E-66 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 873 22.9 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 SUPERFAMILY SSF52374 432 684 3.55E-147 T 22-04-2016 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 SUPERFAMILY SSF52374 7 231 3.55E-147 T 22-04-2016 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Gene3D G3DSA:3.90.740.10 233 473 1.4E-61 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 SUPERFAMILY SSF47323 679 872 2.24E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PANTHER PTHR11946 635 873 0.0 T 22-04-2016 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PANTHER PTHR11946 253 590 0.0 T 22-04-2016 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PANTHER PTHR11946 1 212 0.0 T 22-04-2016 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 1.4E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 540 562 1.4E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 133 150 1.4E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 191 204 1.4E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 159 175 1.4E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 503 521 1.4E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 573 583 1.4E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Gene3D G3DSA:3.40.50.620 635 662 9.6E-130 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Gene3D G3DSA:3.40.50.620 8 232 9.6E-130 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Gene3D G3DSA:3.40.50.620 506 589 9.6E-130 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 SUPERFAMILY SSF50677 231 430 1.7E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PANTHER PTHR11946:SF7 635 873 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PANTHER PTHR11946:SF7 253 590 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 PANTHER PTHR11946:SF7 1 212 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 433 588 2.7E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 635 675 4.5E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Gene3D G3DSA:1.10.730.10 663 809 9.1E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 Pfam PF08264 Anticodon-binding domain of tRNA 714 835 5.0E-14 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RMET_RS14905 9c104e42577c1fd056ed6e12c6591800 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 873 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RMET_RS16340 447a174904532002c62f48abe4b98000 258 PANTHER PTHR30188 4 257 6.5E-103 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RMET_RS16340 447a174904532002c62f48abe4b98000 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 257 6.7E-84 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RMET_RS16340 447a174904532002c62f48abe4b98000 258 PANTHER PTHR30188:SF4 4 257 6.5E-103 T 22-04-2016 RMET_RS16340 447a174904532002c62f48abe4b98000 258 Pfam PF02405 Permease MlaE 44 255 2.1E-74 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 SUPERFAMILY SSF46894 130 232 1.13E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 SMART SM00448 6 118 7.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 SMART SM00862 155 231 2.0E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 PANTHER PTHR26402 6 232 2.9E-60 T 22-04-2016 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 Pfam PF00072 Response regulator receiver domain 11 118 2.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 SUPERFAMILY SSF52172 3 128 4.41E-31 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 Gene3D G3DSA:3.40.50.2300 4 130 2.7E-30 T 22-04-2016 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 3.7E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 PANTHER PTHR26402:SF405 6 232 2.9E-60 T 22-04-2016 RMET_RS00155 a7d6f50159aaa50f3d905cc6438a4382 268 Gene3D G3DSA:1.10.10.10 133 232 2.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06070 b0489e26f538f0e4c4833776da348192 231 PANTHER PTHR23026:SF90 78 230 2.5E-39 T 22-04-2016 RMET_RS06070 b0489e26f538f0e4c4833776da348192 231 PANTHER PTHR23026:SF90 10 59 2.5E-39 T 22-04-2016 RMET_RS06070 b0489e26f538f0e4c4833776da348192 231 PANTHER PTHR23026 78 230 2.5E-39 T 22-04-2016 RMET_RS06070 b0489e26f538f0e4c4833776da348192 231 PANTHER PTHR23026 10 59 2.5E-39 T 22-04-2016 RMET_RS06070 b0489e26f538f0e4c4833776da348192 231 SUPERFAMILY SSF55469 11 229 3.4E-50 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RMET_RS06070 b0489e26f538f0e4c4833776da348192 231 Pfam PF00881 Nitroreductase family 14 206 1.1E-36 T 22-04-2016 IPR029479 Nitroreductase RMET_RS06070 b0489e26f538f0e4c4833776da348192 231 Gene3D G3DSA:3.40.109.10 132 229 3.3E-47 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RMET_RS06070 b0489e26f538f0e4c4833776da348192 231 Gene3D G3DSA:3.40.109.10 10 88 3.3E-47 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 Gene3D G3DSA:3.40.50.980 168 325 2.6E-43 T 22-04-2016 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 PANTHER PTHR24096 1 513 1.4E-190 T 22-04-2016 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 PANTHER PTHR24096:SF206 1 513 1.4E-190 T 22-04-2016 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 Gene3D G3DSA:3.30.300.30 415 513 1.1E-29 T 22-04-2016 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 SUPERFAMILY SSF56801 14 516 3.66E-142 T 22-04-2016 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 Gene3D G3DSA:2.30.38.10 327 414 1.6E-26 T 22-04-2016 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 Pfam PF00501 AMP-binding enzyme 13 420 8.8E-90 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 Gene3D G3DSA:3.40.50.980 9 167 2.2E-33 T 22-04-2016 RMET_RS14025 a3650ffe6c6a824fc9a54a62eee62c69 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 504 2.4E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 Gene3D G3DSA:3.40.50.300 15 171 1.9E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 PANTHER PTHR11669:SF0 1 373 3.6E-164 T 22-04-2016 RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 SUPERFAMILY SSF48019 249 369 1.5E-30 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 Gene3D G3DSA:1.20.272.10 248 365 2.4E-40 T 22-04-2016 RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 675 786 2.9E-6 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 SUPERFAMILY SSF52540 32 228 3.68E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 237 369 2.3E-22 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 Gene3D G3DSA:1.10.8.60 172 247 4.0E-32 T 22-04-2016 RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 SMART SM00382 37 184 6.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 Pfam PF13177 DNA polymerase III, delta subunit 20 183 1.3E-39 T 22-04-2016 RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 PANTHER PTHR11669 1 373 3.6E-164 T 22-04-2016 RMET_RS10660 ce858cf69be89df990d72fc2015045b6 795 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 360 3.7E-128 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 Gene3D G3DSA:3.90.180.10 1 172 6.7E-66 T 22-04-2016 IPR011032 GroES-like RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 Pfam PF00107 Zinc-binding dehydrogenase 179 304 6.8E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 PANTHER PTHR11695 17 342 3.1E-142 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 Gene3D G3DSA:3.40.50.720 173 288 1.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 134 1.4E-31 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 PANTHER PTHR11695:SF280 17 342 3.1E-142 T 22-04-2016 RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 SUPERFAMILY SSF51735 142 308 5.15E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 SUPERFAMILY SSF50129 1 184 1.22E-54 T 22-04-2016 IPR011032 GroES-like RMET_RS05500 2bf565952a63ca6b843c3fcb0fb02a4d 342 SMART SM00829 14 338 5.9E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 Hamap MF_00577 Urocanate hydratase [hutU]. 5 566 50.563 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 Gene3D G3DSA:3.40.50.10730 148 359 4.5E-93 T 22-04-2016 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 Pfam PF01175 Urocanase 18 557 2.1E-261 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 TIGRFAM TIGR01228 hutU: urocanate hydratase 16 564 2.5E-296 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 PIRSF PIRSF001423 1 568 1.4E-296 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 Gene3D G3DSA:3.40.1770.10 370 565 1.7E-162 T 22-04-2016 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 Gene3D G3DSA:3.40.1770.10 16 147 1.7E-162 T 22-04-2016 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 PANTHER PTHR12216:SF3 16 568 0.0 T 22-04-2016 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 PANTHER PTHR12216 16 568 0.0 T 22-04-2016 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 ProSitePatterns PS01233 Urocanase signature. 452 467 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14310 86f6436ba6d8742cc4eec90876ac1c63 568 SUPERFAMILY SSF111326 13 565 1.01E-261 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 SMART SM00859 5 120 1.3E-5 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 292 2.1E-145 T 22-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 116 1.1E-10 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 303 150.74 T 22-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 SUPERFAMILY SSF51735 1 154 9.17E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 PANTHER PTHR41706 1 299 3.3E-121 T 22-04-2016 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 130 267 7.0E-66 T 22-04-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 SUPERFAMILY SSF55347 130 267 1.05E-60 T 22-04-2016 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 Gene3D G3DSA:3.40.50.720 1 142 1.4E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 PIRSF PIRSF015689 1 297 1.3E-135 T 22-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RMET_RS06660 32853d0f61f7cd4d82eb95fc585274d4 303 Gene3D G3DSA:3.30.360.10 143 267 1.5E-67 T 22-04-2016 RMET_RS02200 1004ad4f69ded1031df2b8b53034f7d2 348 PANTHER PTHR33540:SF1 23 341 2.1E-108 T 22-04-2016 RMET_RS02200 1004ad4f69ded1031df2b8b53034f7d2 348 SUPERFAMILY SSF56112 15 328 2.62E-57 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS02200 1004ad4f69ded1031df2b8b53034f7d2 348 Gene3D G3DSA:3.30.200.20 11 106 2.0E-30 T 22-04-2016 RMET_RS02200 1004ad4f69ded1031df2b8b53034f7d2 348 Pfam PF01636 Phosphotransferase enzyme family 37 261 7.1E-31 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RMET_RS02200 1004ad4f69ded1031df2b8b53034f7d2 348 PANTHER PTHR33540 23 341 2.1E-108 T 22-04-2016 RMET_RS02200 1004ad4f69ded1031df2b8b53034f7d2 348 Gene3D G3DSA:3.90.1200.10 108 337 9.2E-76 T 22-04-2016 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 PANTHER PTHR11918 1 455 1.2E-218 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 PANTHER PTHR11918:SF57 1 455 1.2E-218 T 22-04-2016 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 Pfam PF04055 Radical SAM superfamily 153 334 5.5E-31 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 Gene3D G3DSA:3.80.30.20 145 388 1.7E-69 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 11 455 60.857 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 Pfam PF01938 TRAM domain 387 455 1.9E-5 T 22-04-2016 IPR002792 TRAM domain RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 SMART SM00729 147 376 3.1E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 Pfam PF00919 Uncharacterized protein family UPF0004 12 91 1.4E-18 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 12 453 4.7E-170 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 SUPERFAMILY SSF102114 122 381 7.46E-51 T 22-04-2016 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 12 453 1.9E-97 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RMET_RS06860 9f050e51e423cb758a54a0d58d60c671 456 Gene3D G3DSA:2.40.50.140 391 455 1.9E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 PANTHER PTHR26402 1 218 4.4E-88 T 22-04-2016 RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 SMART SM00448 1 112 3.2E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 Pfam PF00072 Response regulator receiver domain 3 112 7.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-38 T 22-04-2016 RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 SUPERFAMILY SSF46894 119 216 8.79E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 216 3.1E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 PANTHER PTHR26402:SF279 1 218 4.4E-88 T 22-04-2016 RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 SMART SM00862 146 217 6.5E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 SUPERFAMILY SSF52172 1 128 8.4E-37 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS15055 f54df5678d91103e772e3cf36f56797d 221 Gene3D G3DSA:1.10.10.10 124 217 3.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 SMART SM00267 244 417 8.0E-57 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 410 1.9E-39 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 Gene3D G3DSA:3.30.70.270 257 418 9.2E-52 T 22-04-2016 RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 PANTHER PTHR10799 174 409 3.3E-42 T 22-04-2016 RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 SUPERFAMILY SSF55073 260 415 1.18E-44 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 PANTHER PTHR10799:SF774 174 409 3.3E-42 T 22-04-2016 RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 Pfam PF00672 HAMP domain 170 238 1.5E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 SMART SM00304 189 242 4.8E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 Pfam PF17152 Periplasmic sensor domain 51 151 4.4E-27 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 RMET_RS11270 2b6918f09f4241e057bfb349314b44ea 426 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 410 3.9E-42 T 22-04-2016 IPR000160 GGDEF domain RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 SUPERFAMILY SSF54814 202 280 3.34E-27 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 SUPERFAMILY SSF50249 135 201 3.9E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 344 9.9E-122 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 PANTHER PTHR22648 1 448 7.4E-156 T 22-04-2016 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Pfam PF08529 NusA N-terminal domain 4 127 7.2E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 SUPERFAMILY SSF54814 281 344 5.04E-14 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Pfam PF13184 NusA-like KH domain 232 299 3.8E-24 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Gene3D G3DSA:3.30.300.20 201 279 4.1E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 416 2.3E-20 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Gene3D G3DSA:3.30.300.20 280 348 3.2E-28 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Gene3D G3DSA:3.30.1480.10 1 128 1.6E-44 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 PANTHER PTHR22648:SF0 1 448 7.4E-156 T 22-04-2016 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 SUPERFAMILY SSF47794 359 418 3.92E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Gene3D G3DSA:2.40.50.140 139 200 9.3E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Pfam PF14520 Helix-hairpin-helix domain 432 487 3.5E-10 T 22-04-2016 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Gene3D G3DSA:1.10.150.20 428 490 3.3E-21 T 22-04-2016 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Gene3D G3DSA:1.10.150.20 357 422 3.2E-23 T 22-04-2016 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 SMART SM00316 136 202 1.2E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Pfam PF00575 S1 RNA binding domain 139 198 7.4E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 SUPERFAMILY SSF47794 429 490 5.34E-14 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 SUPERFAMILY SSF69705 1 129 1.05E-39 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RMET_RS10170 7edb609cffc70c8d8150b6a6947f4a97 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.172 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RMET_RS13290 f497055516e51c2d4af73fce9923a631 413 PIRSF PIRSF003085 5 406 1.2E-128 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 RMET_RS13290 f497055516e51c2d4af73fce9923a631 413 SUPERFAMILY SSF53335 123 389 5.27E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS13290 f497055516e51c2d4af73fce9923a631 413 PANTHER PTHR10108 113 305 2.9E-112 T 22-04-2016 RMET_RS13290 f497055516e51c2d4af73fce9923a631 413 PANTHER PTHR10108 322 406 2.9E-112 T 22-04-2016 RMET_RS13290 f497055516e51c2d4af73fce9923a631 413 PANTHER PTHR10108:SF743 113 305 2.9E-112 T 22-04-2016 RMET_RS13290 f497055516e51c2d4af73fce9923a631 413 PANTHER PTHR10108:SF743 322 406 2.9E-112 T 22-04-2016 RMET_RS13290 f497055516e51c2d4af73fce9923a631 413 Gene3D G3DSA:3.40.50.150 113 389 2.4E-99 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS13290 f497055516e51c2d4af73fce9923a631 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 114 385 9.6E-102 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS08135 22742feac513095980beded12232e6be 547 Pfam PF00005 ABC transporter 32 189 1.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS08135 22742feac513095980beded12232e6be 547 Pfam PF00005 ABC transporter 308 456 4.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS08135 22742feac513095980beded12232e6be 547 SUPERFAMILY SSF52540 11 261 2.83E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08135 22742feac513095980beded12232e6be 547 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS08135 22742feac513095980beded12232e6be 547 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS08135 22742feac513095980beded12232e6be 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 273 6.0E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS08135 22742feac513095980beded12232e6be 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 509 534 1.6E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS08135 22742feac513095980beded12232e6be 547 PANTHER PTHR24220 13 417 1.7E-165 T 22-04-2016 RMET_RS08135 22742feac513095980beded12232e6be 547 SMART SM00382 40 239 2.7E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS08135 22742feac513095980beded12232e6be 547 SMART SM00382 316 507 3.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS08135 22742feac513095980beded12232e6be 547 PANTHER PTHR24220:SF132 13 417 1.7E-165 T 22-04-2016 RMET_RS08135 22742feac513095980beded12232e6be 547 SUPERFAMILY SSF52540 281 529 1.66E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08135 22742feac513095980beded12232e6be 547 Gene3D G3DSA:3.40.50.300 10 263 1.3E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08135 22742feac513095980beded12232e6be 547 Gene3D G3DSA:3.40.50.300 280 531 3.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 Gene3D G3DSA:2.30.40.10 32 81 4.3E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 Gene3D G3DSA:3.20.20.140 82 369 4.1E-108 T 22-04-2016 RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 PANTHER PTHR11271 34 437 1.7E-143 T 22-04-2016 RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 36 436 1.0E-176 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 SUPERFAMILY SSF51556 80 383 1.24E-96 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 Pfam PF01979 Amidohydrolase family 78 437 9.0E-59 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 Gene3D G3DSA:2.30.40.10 370 408 1.9E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 SUPERFAMILY SSF51338 22 96 3.7E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS04480 b016793cf443cb9cc621ff822907ad13 444 PANTHER PTHR11271:SF6 34 437 1.7E-143 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RMET_RS01640 b5432d45b37d9ee25c3a18c6598d0a33 371 Pfam PF00589 Phage integrase family 113 229 3.1E-7 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS01640 b5432d45b37d9ee25c3a18c6598d0a33 371 Gene3D G3DSA:1.10.443.10 30 237 2.7E-11 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS01640 b5432d45b37d9ee25c3a18c6598d0a33 371 SUPERFAMILY SSF56349 28 236 3.24E-11 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 Gene3D G3DSA:3.40.309.10 228 418 4.3E-56 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 Gene3D G3DSA:3.40.605.10 10 227 1.2E-54 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 SUPERFAMILY SSF53720 8 463 5.11E-118 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 PANTHER PTHR11699 29 465 2.1E-144 T 22-04-2016 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 Pfam PF00171 Aldehyde dehydrogenase family 12 436 8.4E-87 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 PIRSF PIRSF036492 1 467 7.3E-160 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 PANTHER PTHR11699:SF216 29 465 2.1E-144 T 22-04-2016 RMET_RS00805 9a4a697e7f25d81c1ba92ccc900d9b9e 467 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 241 252 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RMET_RS15375 a803b7f761d300d15223832027033b02 166 SUPERFAMILY SSF52833 1 163 4.94E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15375 a803b7f761d300d15223832027033b02 166 PANTHER PTHR10681 3 166 1.2E-47 T 22-04-2016 RMET_RS15375 a803b7f761d300d15223832027033b02 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RMET_RS15375 a803b7f761d300d15223832027033b02 166 PANTHER PTHR10681:SF81 3 166 1.2E-47 T 22-04-2016 RMET_RS15375 a803b7f761d300d15223832027033b02 166 Gene3D G3DSA:3.40.30.10 3 166 1.4E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15375 a803b7f761d300d15223832027033b02 166 Pfam PF08534 Redoxin 20 162 6.9E-29 T 22-04-2016 IPR013740 Redoxin GO:0016491 RMET_RS15375 a803b7f761d300d15223832027033b02 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 38.422 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 RMET_RS02005 75a0b4cd19c712c8ded01b8cc4a105e5 184 PANTHER PTHR12918 65 164 1.2E-15 T 22-04-2016 RMET_RS02005 75a0b4cd19c712c8ded01b8cc4a105e5 184 Pfam PF05995 Cysteine dioxygenase type I 63 164 8.3E-13 T 22-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 RMET_RS02005 75a0b4cd19c712c8ded01b8cc4a105e5 184 SUPERFAMILY SSF51182 50 168 5.44E-38 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS02005 75a0b4cd19c712c8ded01b8cc4a105e5 184 Gene3D G3DSA:2.60.120.10 59 171 9.3E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 376 395 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 Pfam PF00875 DNA photolyase 28 187 8.3E-47 T 22-04-2016 IPR006050 DNA photolyase, N-terminal RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 PANTHER PTHR11455 28 505 1.4E-182 T 22-04-2016 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 Gene3D G3DSA:1.25.40.80 232 311 1.7E-34 T 22-04-2016 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 Gene3D G3DSA:1.25.40.80 171 186 1.7E-34 T 22-04-2016 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 PANTHER PTHR11455:SF18 28 505 1.4E-182 T 22-04-2016 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 Gene3D G3DSA:1.10.579.10 312 508 7.7E-76 T 22-04-2016 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 PRINTS PR00147 DNA photolyase signature 167 183 1.1E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 PRINTS PR00147 DNA photolyase signature 415 429 1.1E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 PRINTS PR00147 DNA photolyase signature 376 394 1.1E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 PRINTS PR00147 DNA photolyase signature 356 372 1.1E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 Pfam PF03441 FAD binding domain of DNA photolyase 303 505 7.8E-80 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 SUPERFAMILY SSF48173 227 510 5.23E-104 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 SUPERFAMILY SSF52425 26 207 5.49E-51 T 22-04-2016 IPR006050 DNA photolyase, N-terminal RMET_RS13775 9b823a8943ae5a8cdc8ca9d4cba61dcf 513 Gene3D G3DSA:3.40.50.620 26 170 3.5E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS08595 7084bcbed6c26de4ce511c60b83aaf89 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 201 1.8E-53 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RMET_RS08595 7084bcbed6c26de4ce511c60b83aaf89 333 SUPERFAMILY SSF46689 279 329 3.94E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08595 7084bcbed6c26de4ce511c60b83aaf89 333 PANTHER PTHR11019 194 333 1.6E-16 T 22-04-2016 RMET_RS08595 7084bcbed6c26de4ce511c60b83aaf89 333 Gene3D G3DSA:1.10.10.60 279 329 5.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08595 7084bcbed6c26de4ce511c60b83aaf89 333 Pfam PF12833 Helix-turn-helix domain 251 328 2.2E-13 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS08595 7084bcbed6c26de4ce511c60b83aaf89 333 SMART SM00342 244 326 1.2E-14 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS08595 7084bcbed6c26de4ce511c60b83aaf89 333 PANTHER PTHR11019:SF52 194 333 1.6E-16 T 22-04-2016 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 SMART SM00091 188 254 1.2E-5 T 22-04-2016 IPR000014 PAS domain RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Pfam PF06506 Propionate catabolism activator 18 182 2.2E-48 T 22-04-2016 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Pfam PF02954 Bacterial regulatory protein, Fis family 598 632 1.5E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Gene3D G3DSA:3.40.50.300 313 488 1.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 530 539 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 PANTHER PTHR32071 284 632 5.5E-138 T 22-04-2016 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 SUPERFAMILY SSF46689 530 632 4.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 402 417 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 SUPERFAMILY SSF159800 2 178 1.96E-47 T 22-04-2016 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Gene3D G3DSA:3.40.50.2300 1 82 2.7E-36 T 22-04-2016 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Pfam PF00158 Sigma-54 interaction domain 316 482 3.2E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 SUPERFAMILY SSF55785 187 277 1.71E-12 T 22-04-2016 IPR000014 PAS domain RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 339 352 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Pfam PF00989 PAS fold 190 286 2.9E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Gene3D G3DSA:3.40.50.10660 83 161 2.5E-31 T 22-04-2016 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 SUPERFAMILY SSF52540 314 555 4.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 2 631 4.1E-183 T 22-04-2016 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Gene3D G3DSA:1.10.10.60 597 632 2.6E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 SMART SM00382 335 480 1.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Gene3D G3DSA:3.30.450.20 186 286 1.5E-11 T 22-04-2016 RMET_RS07990 c0d5493d033b0e2abd5283696757a991 633 Gene3D G3DSA:1.10.8.60 489 565 4.3E-19 T 22-04-2016 RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 Gene3D G3DSA:1.10.486.10 423 550 3.6E-8 T 22-04-2016 RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 PANTHER PTHR11070:SF3 24 643 4.6E-246 T 22-04-2016 RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 Gene3D G3DSA:3.40.50.300 314 422 2.7E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 Gene3D G3DSA:3.40.50.300 572 637 2.7E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 Gene3D G3DSA:3.40.50.300 26 305 7.4E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 PANTHER PTHR11070 24 643 4.6E-246 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 SUPERFAMILY SSF52540 22 643 6.59E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 Pfam PF13361 UvrD-like helicase C-terminal domain 569 632 1.8E-17 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 Pfam PF13361 UvrD-like helicase C-terminal domain 312 460 8.3E-20 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RMET_RS01180 8ab7822d787073cb7acc8346a95c7e80 702 Pfam PF00580 UvrD/REP helicase N-terminal domain 28 304 2.0E-55 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 18 295 30.879 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 SUPERFAMILY SSF51735 118 296 4.41E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 Gene3D G3DSA:3.40.192.10 18 122 1.0E-37 T 22-04-2016 RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 21 296 2.5E-77 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 23 104 7.5E-25 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 Gene3D G3DSA:3.40.50.720 123 297 1.4E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 PANTHER PTHR21089 18 302 5.3E-142 T 22-04-2016 RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 134 217 5.8E-8 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 PANTHER PTHR21089:SF2 18 302 5.3E-142 T 22-04-2016 RMET_RS15305 7dd5228d6cd58af73db76e0af41a0df5 302 SUPERFAMILY SSF53223 18 117 2.19E-31 T 22-04-2016 RMET_RS11945 9606b751bf200ea5e55c956a47a80a74 342 Pfam PF13936 Helix-turn-helix domain 6 48 4.2E-16 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RMET_RS11945 9606b751bf200ea5e55c956a47a80a74 342 Gene3D G3DSA:3.30.420.10 180 330 9.2E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS11945 9606b751bf200ea5e55c956a47a80a74 342 PANTHER PTHR10948 1 341 1.5E-80 T 22-04-2016 RMET_RS11945 9606b751bf200ea5e55c956a47a80a74 342 ProSitePatterns PS01043 Transposases, IS30 family, signature. 275 291 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 RMET_RS11945 9606b751bf200ea5e55c956a47a80a74 342 Gene3D G3DSA:1.10.10.60 8 42 6.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS11945 9606b751bf200ea5e55c956a47a80a74 342 SUPERFAMILY SSF53098 180 333 2.28E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS11945 9606b751bf200ea5e55c956a47a80a74 342 Pfam PF00665 Integrase core domain 180 288 1.2E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS08010 9606b751bf200ea5e55c956a47a80a74 342 Pfam PF13936 Helix-turn-helix domain 6 48 4.2E-16 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RMET_RS08010 9606b751bf200ea5e55c956a47a80a74 342 Gene3D G3DSA:3.30.420.10 180 330 9.2E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08010 9606b751bf200ea5e55c956a47a80a74 342 PANTHER PTHR10948 1 341 1.5E-80 T 22-04-2016 RMET_RS08010 9606b751bf200ea5e55c956a47a80a74 342 ProSitePatterns PS01043 Transposases, IS30 family, signature. 275 291 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 RMET_RS08010 9606b751bf200ea5e55c956a47a80a74 342 Gene3D G3DSA:1.10.10.60 8 42 6.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08010 9606b751bf200ea5e55c956a47a80a74 342 SUPERFAMILY SSF53098 180 333 2.28E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08010 9606b751bf200ea5e55c956a47a80a74 342 Pfam PF00665 Integrase core domain 180 288 1.2E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS07690 9606b751bf200ea5e55c956a47a80a74 342 Pfam PF13936 Helix-turn-helix domain 6 48 4.2E-16 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RMET_RS07690 9606b751bf200ea5e55c956a47a80a74 342 Gene3D G3DSA:3.30.420.10 180 330 9.2E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS07690 9606b751bf200ea5e55c956a47a80a74 342 PANTHER PTHR10948 1 341 1.5E-80 T 22-04-2016 RMET_RS07690 9606b751bf200ea5e55c956a47a80a74 342 ProSitePatterns PS01043 Transposases, IS30 family, signature. 275 291 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 RMET_RS07690 9606b751bf200ea5e55c956a47a80a74 342 Gene3D G3DSA:1.10.10.60 8 42 6.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07690 9606b751bf200ea5e55c956a47a80a74 342 SUPERFAMILY SSF53098 180 333 2.28E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS07690 9606b751bf200ea5e55c956a47a80a74 342 Pfam PF00665 Integrase core domain 180 288 1.2E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 267 45.782 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 PIRSF PIRSF000456 1 267 9.8E-100 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 Gene3D G3DSA:2.160.10.10 2 184 1.1E-47 T 22-04-2016 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 Gene3D G3DSA:1.20.1180.10 197 267 2.8E-23 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 139 1.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 48 3.5E-8 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 SUPERFAMILY SSF51161 2 265 2.07E-73 T 22-04-2016 IPR011004 Trimeric LpxA-like RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 266 3.3E-26 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 PANTHER PTHR23416:SF8 1 259 1.1E-117 T 22-04-2016 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 266 7.1E-101 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RMET_RS07290 848d4b2560b968792cfed0bbcf2f8e4c 267 PANTHER PTHR23416 1 259 1.1E-117 T 22-04-2016 RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 PANTHER PTHR24220:SF132 14 325 2.1E-125 T 22-04-2016 RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 Pfam PF00005 ABC transporter 33 190 3.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 PANTHER PTHR24220 14 325 2.1E-125 T 22-04-2016 RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 SMART SM00382 41 248 7.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 SUPERFAMILY SSF52540 13 261 4.99E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 325 2.3E-22 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 Gene3D G3DSA:3.40.50.300 12 265 2.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09705 187c727dcd3b6f112626c53b1568946f 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 306 2.2E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 Gene3D G3DSA:2.30.38.10 384 455 1.1E-30 T 22-04-2016 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 Pfam PF00501 AMP-binding enzyme 30 464 1.0E-108 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 473 547 7.8E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 Gene3D G3DSA:3.30.300.30 461 556 9.0E-29 T 22-04-2016 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 Gene3D G3DSA:3.40.50.980 184 214 7.9E-40 T 22-04-2016 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 Gene3D G3DSA:3.40.50.980 24 151 7.9E-40 T 22-04-2016 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 SUPERFAMILY SSF56801 20 555 2.49E-153 T 22-04-2016 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 PANTHER PTHR24096 16 154 3.4E-176 T 22-04-2016 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 PANTHER PTHR24096 175 555 3.4E-176 T 22-04-2016 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 Gene3D G3DSA:3.40.50.980 215 383 1.6E-42 T 22-04-2016 RMET_RS15765 b746cba8d94688c0b8f6a812da73dca3 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 PANTHER PTHR33910 2 126 5.8E-17 T 22-04-2016 RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 PANTHER PTHR33910:SF1 2 126 5.8E-17 T 22-04-2016 RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 120 11.284 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 8.0E-12 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 8.0E-12 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 8.0E-12 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 Gene3D G3DSA:1.20.5.1030 64 121 1.7E-23 T 22-04-2016 RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 119 1.3E-19 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RMET_RS16750 1038246b964ef3b0543fac1f5500e9b6 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 122 1.3E-18 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 SUPERFAMILY SSF63411 298 487 1.59E-36 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 PANTHER PTHR11851:SF136 71 500 4.3E-111 T 22-04-2016 RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 Pfam PF00675 Insulinase (Peptidase family M16) 83 228 1.1E-25 T 22-04-2016 IPR011765 Peptidase M16, N-terminal RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 Pfam PF05193 Peptidase M16 inactive domain 239 419 2.5E-30 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 Gene3D G3DSA:3.30.830.10 72 288 4.1E-56 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 PANTHER PTHR11851 71 500 4.3E-111 T 22-04-2016 RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 SUPERFAMILY SSF63411 72 285 4.89E-60 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 Gene3D G3DSA:3.30.830.10 289 482 4.5E-29 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RMET_RS01435 c50e3407e3bd571f1fee967d8c630e74 504 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 104 127 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RMET_RS14325 55e9981a268de6c38b11ebdf13fa526a 259 PANTHER PTHR24220 5 229 1.9E-95 T 22-04-2016 RMET_RS14325 55e9981a268de6c38b11ebdf13fa526a 259 SUPERFAMILY SSF52540 4 233 1.35E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14325 55e9981a268de6c38b11ebdf13fa526a 259 SMART SM00382 33 212 1.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS14325 55e9981a268de6c38b11ebdf13fa526a 259 PANTHER PTHR24220:SF10 5 229 1.9E-95 T 22-04-2016 RMET_RS14325 55e9981a268de6c38b11ebdf13fa526a 259 Gene3D G3DSA:3.40.50.300 3 222 2.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14325 55e9981a268de6c38b11ebdf13fa526a 259 Pfam PF00005 ABC transporter 26 163 2.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 464 48.71 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 SUPERFAMILY SSF51735 231 390 5.19E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 SUPERFAMILY SSF52283 9 147 3.68E-113 T 22-04-2016 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 SUPERFAMILY SSF52283 183 230 3.68E-113 T 22-04-2016 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 SUPERFAMILY SSF52283 391 472 3.68E-113 T 22-04-2016 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 471 1.4E-145 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 Gene3D G3DSA:3.40.50.1480 182 269 1.6E-122 T 22-04-2016 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 Gene3D G3DSA:3.40.50.1480 8 146 1.6E-122 T 22-04-2016 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 253 269 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 Gene3D G3DSA:3.40.50.720 270 348 3.0E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 PANTHER PTHR23420 8 145 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 PANTHER PTHR23420 181 472 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 SMART SM00997 231 390 5.2E-113 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 231 390 3.7E-81 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 464 1.3E-183 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 PIRSF PIRSF001109 2 472 6.1E-190 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 Gene3D G3DSA:3.40.50.1480 391 472 7.1E-33 T 22-04-2016 RMET_RS00865 8fb68e5ac05250a4b130ace6b895bfbf 472 SMART SM00996 10 471 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS12350 7bbb2e02668fc9f2b49c2fef819ed127 165 PANTHER PTHR36926 2 156 1.3E-32 T 22-04-2016 RMET_RS12350 7bbb2e02668fc9f2b49c2fef819ed127 165 PANTHER PTHR36926:SF1 2 156 1.3E-32 T 22-04-2016 RMET_RS12350 7bbb2e02668fc9f2b49c2fef819ed127 165 Pfam PF02674 Colicin V production protein 6 147 1.8E-35 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RMET_RS07915 80bd4ffc981ea38045570603b5e09dcd 189 Pfam PF14437 MafB19-like deaminase 16 158 3.9E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RMET_RS07915 80bd4ffc981ea38045570603b5e09dcd 189 PANTHER PTHR11079 14 160 4.5E-46 T 22-04-2016 RMET_RS07915 80bd4ffc981ea38045570603b5e09dcd 189 Gene3D G3DSA:3.40.140.10 10 155 4.4E-59 T 22-04-2016 RMET_RS07915 80bd4ffc981ea38045570603b5e09dcd 189 PANTHER PTHR11079:SF72 14 160 4.5E-46 T 22-04-2016 RMET_RS07915 80bd4ffc981ea38045570603b5e09dcd 189 SUPERFAMILY SSF53927 11 163 8.2E-57 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RMET_RS07915 80bd4ffc981ea38045570603b5e09dcd 189 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 18 159 47.636 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RMET_RS07915 80bd4ffc981ea38045570603b5e09dcd 189 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 63 100 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RMET_RS02470 3a3a94e9a678c31db8078e00a1692149 190 Pfam PF11161 Protein of unknown function (DUF2946) 1 187 4.5E-69 T 22-04-2016 IPR021332 Protein of unknown function DUF2944 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82866 830 1029 1.22E-42 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 Gene3D G3DSA:3.30.70.1430 40 142 8.1E-29 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82693 136 182 1.1E-18 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82693 677 718 1.52E-9 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 Gene3D G3DSA:1.20.1640.10 297 509 3.2E-55 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82693 807 849 1.52E-9 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 Gene3D G3DSA:1.10.3850.10 814 1029 1.9E-53 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 Pfam PF00873 AcrB/AcrD/AcrF family 3 1027 2.2E-292 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PANTHER PTHR32063 1 1038 0.0 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PANTHER PTHR32063:SF30 1 1038 0.0 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82693 571 663 2.14E-10 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 558 575 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 450 473 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 342 365 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 475 498 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 PRINTS PR00702 Acriflavin resistance protein family signature 369 390 5.4E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82714 183 265 6.54E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82866 302 502 1.23E-44 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 Gene3D G3DSA:3.30.70.1430 573 661 9.2E-7 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 Gene3D G3DSA:3.30.2090.10 182 261 2.8E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 Gene3D G3DSA:3.30.2090.10 723 803 3.1E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82693 40 133 6.63E-23 T 22-04-2016 RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82714 722 803 9.16E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS03035 32d6d4c3dd69c462a56ef0e08938ab25 1066 SUPERFAMILY SSF82693 280 336 1.1E-18 T 22-04-2016 RMET_RS16300 a22995fdafa3f896955cc6d5adb44f15 416 SUPERFAMILY SSF55205 1 415 2.78E-142 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RMET_RS16300 a22995fdafa3f896955cc6d5adb44f15 416 Gene3D G3DSA:3.65.10.10 220 414 5.5E-59 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RMET_RS16300 a22995fdafa3f896955cc6d5adb44f15 416 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 46.083 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS16300 a22995fdafa3f896955cc6d5adb44f15 416 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 7.6E-176 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS16300 a22995fdafa3f896955cc6d5adb44f15 416 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 405 2.3E-108 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RMET_RS16300 a22995fdafa3f896955cc6d5adb44f15 416 PANTHER PTHR21090 1 416 3.9E-192 T 22-04-2016 RMET_RS16300 a22995fdafa3f896955cc6d5adb44f15 416 Gene3D G3DSA:3.65.10.10 21 219 1.4E-70 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RMET_RS04675 3095f66a4b566fbc728fe0c8dd6f9c21 199 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 86 147 3.0E-25 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RMET_RS04675 3095f66a4b566fbc728fe0c8dd6f9c21 199 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 120 141 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 RMET_RS04675 3095f66a4b566fbc728fe0c8dd6f9c21 199 SUPERFAMILY SSF143243 8 181 3.27E-55 T 22-04-2016 RMET_RS04675 3095f66a4b566fbc728fe0c8dd6f9c21 199 PANTHER PTHR10884 23 177 1.5E-69 T 22-04-2016 RMET_RS04675 3095f66a4b566fbc728fe0c8dd6f9c21 199 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 33 158 7.1E-42 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RMET_RS04675 3095f66a4b566fbc728fe0c8dd6f9c21 199 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 160 2.2E-43 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RMET_RS04675 3095f66a4b566fbc728fe0c8dd6f9c21 199 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 7 167 34.924 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 SUPERFAMILY SSF54913 1 112 7.31E-46 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 PIRSF PIRSF039144 1 112 6.9E-54 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 Gene3D G3DSA:3.30.70.120 1 112 5.1E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 PANTHER PTHR30115:SF12 1 112 9.4E-68 T 22-04-2016 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 PRINTS PR00340 P-II protein signature 83 103 1.6E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 PRINTS PR00340 P-II protein signature 52 75 1.6E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 PRINTS PR00340 P-II protein signature 23 41 1.6E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 PRINTS PR00340 P-II protein signature 2 17 1.6E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 SMART SM00938 4 105 5.8E-66 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 PANTHER PTHR30115 1 112 9.4E-68 T 22-04-2016 RMET_RS01220 46cf3ca0dce33d2f0a29f361377d5c8a 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.3E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS04510 2bf01672a19972ea3a89e53227abda80 284 PANTHER PTHR37945 10 284 1.2E-99 T 22-04-2016 RMET_RS04510 2bf01672a19972ea3a89e53227abda80 284 Gene3D G3DSA:3.40.190.10 26 166 6.7E-39 T 22-04-2016 RMET_RS04510 2bf01672a19972ea3a89e53227abda80 284 Pfam PF12849 PBP superfamily domain 35 261 5.7E-31 T 22-04-2016 IPR024370 PBP domain RMET_RS04510 2bf01672a19972ea3a89e53227abda80 284 Gene3D G3DSA:3.40.190.10 201 283 1.7E-26 T 22-04-2016 RMET_RS04510 2bf01672a19972ea3a89e53227abda80 284 SUPERFAMILY SSF53850 40 270 1.13E-31 T 22-04-2016 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 PANTHER PTHR14226 20 108 1.2E-61 T 22-04-2016 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 PANTHER PTHR14226 199 353 1.2E-61 T 22-04-2016 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 Pfam PF01734 Patatin-like phospholipase 23 244 4.5E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 PANTHER PTHR14226:SF34 20 108 1.2E-61 T 22-04-2016 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 PANTHER PTHR14226 132 181 1.2E-61 T 22-04-2016 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 PANTHER PTHR14226:SF34 132 181 1.2E-61 T 22-04-2016 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 PANTHER PTHR14226:SF34 199 353 1.2E-61 T 22-04-2016 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 SUPERFAMILY SSF52151 19 302 6.54E-40 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS00405 3798736160ddf398e6fcd84f4e21549e 418 Gene3D G3DSA:3.40.1090.10 17 245 1.1E-11 T 22-04-2016 RMET_RS09145 0877e4edd70b3888c6b74642e327c990 337 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 215 1.2E-59 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS09145 0877e4edd70b3888c6b74642e327c990 337 Gene3D G3DSA:3.40.50.300 5 184 1.9E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09145 0877e4edd70b3888c6b74642e327c990 337 PANTHER PTHR11669:SF8 108 230 2.2E-46 T 22-04-2016 RMET_RS09145 0877e4edd70b3888c6b74642e327c990 337 PANTHER PTHR11669:SF8 17 85 2.2E-46 T 22-04-2016 RMET_RS09145 0877e4edd70b3888c6b74642e327c990 337 PANTHER PTHR11669 108 230 2.2E-46 T 22-04-2016 RMET_RS09145 0877e4edd70b3888c6b74642e327c990 337 PANTHER PTHR11669 17 85 2.2E-46 T 22-04-2016 RMET_RS09145 0877e4edd70b3888c6b74642e327c990 337 Pfam PF13177 DNA polymerase III, delta subunit 17 183 2.0E-39 T 22-04-2016 RMET_RS09145 0877e4edd70b3888c6b74642e327c990 337 SUPERFAMILY SSF52540 5 220 1.31E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 Pfam PF07729 FCD domain 100 222 4.1E-23 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 SUPERFAMILY SSF48008 96 229 1.18E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 Gene3D G3DSA:1.20.120.530 93 229 1.6E-31 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 PANTHER PTHR11751 27 116 1.6E-22 T 22-04-2016 RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 90 4.3E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 SUPERFAMILY SSF46785 23 94 2.79E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 SMART SM00345 32 90 2.3E-4 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 SMART SM00895 100 224 5.6E-17 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS04455 3c9ac61577bb7d0b74aa4a9d5c676e11 247 Gene3D G3DSA:1.10.10.10 17 91 4.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 Gene3D G3DSA:3.30.572.10 1 264 3.0E-136 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 Pfam PF00303 Thymidylate synthase 2 264 2.7E-125 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 SUPERFAMILY SSF55831 1 264 6.41E-132 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 PANTHER PTHR11548 1 264 2.1E-190 T 22-04-2016 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 3.2E-96 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 6.6E-42 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.0E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.0E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.0E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.0E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.0E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS12905 bcbb58a743f7dff39e6d18ea48da5b62 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.022 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RMET_RS11815 77a495d14dad2bf7ad3c5ffa596eb2c3 254 Pfam PF13462 Thioredoxin 65 209 1.7E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS11815 77a495d14dad2bf7ad3c5ffa596eb2c3 254 SUPERFAMILY SSF52833 35 229 3.69E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS11815 77a495d14dad2bf7ad3c5ffa596eb2c3 254 Gene3D G3DSA:3.40.30.10 65 232 4.9E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS17390 b2135f3b62b4f1cec398c02c4c1bbc64 503 Gene3D G3DSA:3.40.50.150 262 476 1.5E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS17390 b2135f3b62b4f1cec398c02c4c1bbc64 503 SUPERFAMILY SSF103473 2 190 5.49E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS17390 b2135f3b62b4f1cec398c02c4c1bbc64 503 PANTHER PTHR11558:SF26 227 501 1.7E-78 T 22-04-2016 RMET_RS17390 b2135f3b62b4f1cec398c02c4c1bbc64 503 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 285 298 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RMET_RS17390 b2135f3b62b4f1cec398c02c4c1bbc64 503 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 218 481 23.469 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RMET_RS17390 b2135f3b62b4f1cec398c02c4c1bbc64 503 SUPERFAMILY SSF53335 207 476 1.18E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS17390 b2135f3b62b4f1cec398c02c4c1bbc64 503 PANTHER PTHR11558 227 501 1.7E-78 T 22-04-2016 RMET_RS17390 b2135f3b62b4f1cec398c02c4c1bbc64 503 Pfam PF01564 Spermine/spermidine synthase 227 444 9.0E-42 T 22-04-2016 RMET_RS16230 460b5252be8adee9b9fc1b6b4033e048 168 PANTHER PTHR33162 1 104 2.2E-15 T 22-04-2016 RMET_RS16230 460b5252be8adee9b9fc1b6b4033e048 168 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 119 16.004 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RMET_RS16230 460b5252be8adee9b9fc1b6b4033e048 168 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 69 1.1E-18 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RMET_RS16230 460b5252be8adee9b9fc1b6b4033e048 168 PANTHER PTHR33162:SF1 1 104 2.2E-15 T 22-04-2016 RMET_RS16230 460b5252be8adee9b9fc1b6b4033e048 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.7E-15 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RMET_RS16230 460b5252be8adee9b9fc1b6b4033e048 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.7E-15 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RMET_RS16230 460b5252be8adee9b9fc1b6b4033e048 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 6.7E-15 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RMET_RS16230 460b5252be8adee9b9fc1b6b4033e048 168 Pfam PF02416 mttA/Hcf106 family 4 34 5.0E-7 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 SUPERFAMILY SSF56672 386 782 3.06E-112 T 22-04-2016 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 Gene3D G3DSA:3.30.420.10 150 367 8.5E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 PANTHER PTHR10322 74 784 8.9E-198 T 22-04-2016 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 SUPERFAMILY SSF53098 4 391 4.44E-89 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 Pfam PF00136 DNA polymerase family B 379 710 5.5E-38 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 73 298 8.2E-10 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 SMART SM00486 150 557 5.5E-61 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 Gene3D G3DSA:3.90.1600.10 514 559 4.5E-10 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS08275 78fa3027c925cd091ae06a80501af179 789 Gene3D G3DSA:3.90.1600.10 399 433 4.5E-10 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS01340 758b718b253eec1a79b54f81d58bbfbb 198 PANTHER PTHR21320:SF3 4 179 6.9E-41 T 22-04-2016 RMET_RS01340 758b718b253eec1a79b54f81d58bbfbb 198 PANTHER PTHR21320 4 179 6.9E-41 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RMET_RS01340 758b718b253eec1a79b54f81d58bbfbb 198 Gene3D G3DSA:2.60.370.10 62 190 4.8E-50 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RMET_RS01340 758b718b253eec1a79b54f81d58bbfbb 198 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 34 178 6.7E-51 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RMET_RS01340 758b718b253eec1a79b54f81d58bbfbb 198 SUPERFAMILY SSF110111 62 180 6.02E-46 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RMET_RS01340 758b718b253eec1a79b54f81d58bbfbb 198 PIRSF PIRSF005413 4 196 9.7E-66 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RMET_RS16145 85f14954857933e1204fb3a682339c9b 380 SUPERFAMILY SSF56300 154 377 6.92E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS16145 85f14954857933e1204fb3a682339c9b 380 Pfam PF00149 Calcineurin-like phosphoesterase 154 322 1.5E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RMET_RS16145 85f14954857933e1204fb3a682339c9b 380 PANTHER PTHR31302:SF7 116 379 2.2E-82 T 22-04-2016 RMET_RS16145 85f14954857933e1204fb3a682339c9b 380 PANTHER PTHR31302 116 379 2.2E-82 T 22-04-2016 RMET_RS16145 85f14954857933e1204fb3a682339c9b 380 Gene3D G3DSA:3.60.21.10 154 330 2.8E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.7E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.7E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.7E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.4E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 SUPERFAMILY SSF110324 2 80 3.84E-32 T 22-04-2016 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 Gene3D G3DSA:2.40.50.100 20 84 8.2E-30 T 22-04-2016 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.533 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 Pfam PF01016 Ribosomal L27 protein 2 82 7.2E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15545 e3d01b715c74d8f46a1fe81e931dfb21 86 PANTHER PTHR15893 1 86 1.5E-44 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 PANTHER PTHR30487 3 40 3.1E-111 T 22-04-2016 RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 PANTHER PTHR30487 60 281 3.1E-111 T 22-04-2016 RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 203 213 9.9E-27 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 146 163 9.9E-27 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 214 225 9.9E-27 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 226 241 9.9E-27 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 Pfam PF01478 Type IV leader peptidase family 138 245 1.9E-27 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 127 3.2E-36 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 PANTHER PTHR30487:SF0 3 40 3.1E-111 T 22-04-2016 RMET_RS15575 db743fc2ec5d49b2b447e614fa18b3dc 289 PANTHER PTHR30487:SF0 60 281 3.1E-111 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 PANTHER PTHR10909 380 435 1.8E-106 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 PANTHER PTHR10909 13 361 1.8E-106 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 227 7.6E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Gene3D G3DSA:2.40.110.10 131 229 8.7E-35 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Gene3D G3DSA:1.10.540.10 424 518 1.9E-8 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 409 9.2E-12 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 654 788 5.5E-19 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 126 3.6E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 426 502 1.6E-6 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 SUPERFAMILY SSF56645 421 638 4.32E-29 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Gene3D G3DSA:1.20.140.10 230 411 2.5E-19 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Gene3D G3DSA:1.20.140.10 631 784 3.6E-23 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 SUPERFAMILY SSF56645 14 249 5.5E-68 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 PANTHER PTHR10909:SF229 380 435 1.8E-106 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 PANTHER PTHR10909:SF229 13 361 1.8E-106 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 SUPERFAMILY SSF47203 239 410 1.26E-11 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Gene3D G3DSA:2.40.110.10 547 630 4.7E-9 T 22-04-2016 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 SUPERFAMILY SSF47203 651 788 9.5E-26 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS17140 df5a67a6b44c6d67cceaaacbd8b58c7a 800 Gene3D G3DSA:1.10.540.10 14 128 2.9E-24 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS16655 ca6e6b135ca7700a94010f76e65b394b 409 Pfam PF01738 Dienelactone hydrolase family 14 228 5.3E-46 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RMET_RS16655 ca6e6b135ca7700a94010f76e65b394b 409 SUPERFAMILY SSF53474 2 227 7.3E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS16655 ca6e6b135ca7700a94010f76e65b394b 409 Gene3D G3DSA:3.10.450.50 248 377 9.1E-17 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS16655 ca6e6b135ca7700a94010f76e65b394b 409 PANTHER PTHR32083 198 408 1.1E-75 T 22-04-2016 RMET_RS16655 ca6e6b135ca7700a94010f76e65b394b 409 Pfam PF12680 SnoaL-like domain 247 355 3.0E-6 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RMET_RS16655 ca6e6b135ca7700a94010f76e65b394b 409 Gene3D G3DSA:3.40.50.1820 3 228 3.7E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS16655 ca6e6b135ca7700a94010f76e65b394b 409 SUPERFAMILY SSF54427 236 379 1.16E-25 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS16655 ca6e6b135ca7700a94010f76e65b394b 409 PANTHER PTHR32083:SF28 198 408 1.1E-75 T 22-04-2016 RMET_RS04955 9390a6af372e25d24f5fb9ad6421e301 197 PANTHER PTHR13256:SF20 6 195 4.8E-88 T 22-04-2016 RMET_RS04955 9390a6af372e25d24f5fb9ad6421e301 197 PANTHER PTHR13256 6 195 4.8E-88 T 22-04-2016 RMET_RS04955 9390a6af372e25d24f5fb9ad6421e301 197 SUPERFAMILY SSF55729 6 178 2.78E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS04955 9390a6af372e25d24f5fb9ad6421e301 197 Gene3D G3DSA:3.40.630.30 4 193 1.9E-56 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS04955 9390a6af372e25d24f5fb9ad6421e301 197 Pfam PF13302 Acetyltransferase (GNAT) domain 16 153 3.7E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 Pfam PF02321 Outer membrane efflux protein 278 460 2.7E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 Pfam PF02321 Outer membrane efflux protein 63 253 5.8E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 PANTHER PTHR30203 2 481 2.1E-104 T 22-04-2016 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 PANTHER PTHR30203:SF3 2 481 2.1E-104 T 22-04-2016 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 Gene3D G3DSA:2.20.200.10 99 140 5.2E-18 T 22-04-2016 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 Gene3D G3DSA:2.20.200.10 312 347 5.2E-18 T 22-04-2016 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 SUPERFAMILY SSF56954 2 464 7.72E-113 T 22-04-2016 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 Gene3D G3DSA:1.20.1600.10 51 89 1.3E-99 T 22-04-2016 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 Gene3D G3DSA:1.20.1600.10 141 311 1.3E-99 T 22-04-2016 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 Gene3D G3DSA:1.20.1600.10 349 463 1.3E-99 T 22-04-2016 RMET_RS08535 cb466f2763724fa2498bf98ca575ee0f 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 462 1.8E-118 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 PIRSF PIRSF010376 12 291 9.7E-89 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 Gene3D G3DSA:3.30.70.890 169 291 1.1E-40 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 SUPERFAMILY SSF55060 169 290 1.3E-32 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 SUPERFAMILY SSF54211 16 166 4.71E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 13 285 32.618 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 15 288 4.3E-80 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 PANTHER PTHR20861 16 281 3.2E-87 T 22-04-2016 RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 Gene3D G3DSA:3.30.230.10 15 167 4.2E-53 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 Pfam PF08544 GHMP kinases C terminal 223 275 1.5E-7 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 Pfam PF00288 GHMP kinases N terminal domain 95 152 3.2E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 RMET_RS01480 50dc3245415ca5070198e8c0c8435d8f 292 PANTHER PTHR20861:SF2 16 281 3.2E-87 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS04490 dc3a0b78ca40b4c566a7b9da5fddb716 331 Pfam PF02625 XdhC and CoxI family 17 78 1.2E-19 T 22-04-2016 IPR003777 XdhC- CoxI RMET_RS04490 dc3a0b78ca40b4c566a7b9da5fddb716 331 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 26 311 8.5E-103 T 22-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC RMET_RS04490 dc3a0b78ca40b4c566a7b9da5fddb716 331 Pfam PF13478 XdhC Rossmann domain 169 310 1.8E-35 T 22-04-2016 IPR027051 XdhC Rossmann domain RMET_RS04490 dc3a0b78ca40b4c566a7b9da5fddb716 331 PANTHER PTHR30388:SF5 11 327 3.4E-76 T 22-04-2016 RMET_RS04490 dc3a0b78ca40b4c566a7b9da5fddb716 331 PANTHER PTHR30388 11 327 3.4E-76 T 22-04-2016 RMET_RS04490 dc3a0b78ca40b4c566a7b9da5fddb716 331 Gene3D G3DSA:3.40.50.720 163 247 3.2E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01630 aa9aa73f490f2e92894acc67862e0501 479 SUPERFAMILY SSF53098 171 327 6.32E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS01630 aa9aa73f490f2e92894acc67862e0501 479 Pfam PF00665 Integrase core domain 176 294 1.3E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS01630 aa9aa73f490f2e92894acc67862e0501 479 Gene3D G3DSA:3.30.420.10 170 334 5.3E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS15735 aa9aa73f490f2e92894acc67862e0501 479 SUPERFAMILY SSF53098 171 327 6.32E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS15735 aa9aa73f490f2e92894acc67862e0501 479 Pfam PF00665 Integrase core domain 176 294 1.3E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS15735 aa9aa73f490f2e92894acc67862e0501 479 Gene3D G3DSA:3.30.420.10 170 334 5.3E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS12800 aa9aa73f490f2e92894acc67862e0501 479 SUPERFAMILY SSF53098 171 327 6.32E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS12800 aa9aa73f490f2e92894acc67862e0501 479 Pfam PF00665 Integrase core domain 176 294 1.3E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS12800 aa9aa73f490f2e92894acc67862e0501 479 Gene3D G3DSA:3.30.420.10 170 334 5.3E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS12055 aa9aa73f490f2e92894acc67862e0501 479 SUPERFAMILY SSF53098 171 327 6.32E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS12055 aa9aa73f490f2e92894acc67862e0501 479 Pfam PF00665 Integrase core domain 176 294 1.3E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS12055 aa9aa73f490f2e92894acc67862e0501 479 Gene3D G3DSA:3.30.420.10 170 334 5.3E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS14230 aa9aa73f490f2e92894acc67862e0501 479 SUPERFAMILY SSF53098 171 327 6.32E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS14230 aa9aa73f490f2e92894acc67862e0501 479 Pfam PF00665 Integrase core domain 176 294 1.3E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS14230 aa9aa73f490f2e92894acc67862e0501 479 Gene3D G3DSA:3.30.420.10 170 334 5.3E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10050 aa9aa73f490f2e92894acc67862e0501 479 SUPERFAMILY SSF53098 171 327 6.32E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10050 aa9aa73f490f2e92894acc67862e0501 479 Pfam PF00665 Integrase core domain 176 294 1.3E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS10050 aa9aa73f490f2e92894acc67862e0501 479 Gene3D G3DSA:3.30.420.10 170 334 5.3E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10010 aa9aa73f490f2e92894acc67862e0501 479 SUPERFAMILY SSF53098 171 327 6.32E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10010 aa9aa73f490f2e92894acc67862e0501 479 Pfam PF00665 Integrase core domain 176 294 1.3E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS10010 aa9aa73f490f2e92894acc67862e0501 479 Gene3D G3DSA:3.30.420.10 170 334 5.3E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 SUPERFAMILY SSF52833 3 108 1.48E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 PIRSF PIRSF000077 2 108 3.7E-45 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 PANTHER PTHR10438 4 105 5.5E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 6.2E-41 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 Pfam PF00085 Thioredoxin 5 106 4.0E-36 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 Gene3D G3DSA:3.40.30.10 2 107 6.7E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 PRINTS PR00421 Thioredoxin family signature 24 32 9.6E-10 T 22-04-2016 RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 PRINTS PR00421 Thioredoxin family signature 72 83 9.6E-10 T 22-04-2016 RMET_RS10685 43c73285f60ddc2ca906f6ea422e1bc3 108 PRINTS PR00421 Thioredoxin family signature 32 41 9.6E-10 T 22-04-2016 RMET_RS12115 68521a1652a80b562249c9b8d9d50eb1 260 Gene3D G3DSA:3.20.20.70 10 247 2.1E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS12115 68521a1652a80b562249c9b8d9d50eb1 260 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 249 127.268 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RMET_RS12115 68521a1652a80b562249c9b8d9d50eb1 260 SUPERFAMILY SSF63892 10 246 6.41E-97 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RMET_RS12115 68521a1652a80b562249c9b8d9d50eb1 260 PANTHER PTHR30456:SF0 8 251 6.8E-137 T 22-04-2016 RMET_RS12115 68521a1652a80b562249c9b8d9d50eb1 260 PANTHER PTHR30456 8 251 6.8E-137 T 22-04-2016 RMET_RS12115 68521a1652a80b562249c9b8d9d50eb1 260 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 12 244 6.8E-96 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RMET_RS12115 68521a1652a80b562249c9b8d9d50eb1 260 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 12 244 2.1E-102 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 PANTHER PTHR21091 3 254 1.1E-70 T 22-04-2016 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 95 106 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 17 242 34.367 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 Gene3D G3DSA:3.40.1010.10 16 124 2.2E-12 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 18 295 5.6E-72 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 PANTHER PTHR21091:SF18 3 254 1.1E-70 T 22-04-2016 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 220 2.1E-27 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 Gene3D G3DSA:3.30.950.10 125 243 4.6E-33 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 PIRSF PIRSF005917 7 299 4.8E-90 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS17240 4e53cc1e9988d4ba1b0afb246b05b8dd 299 SUPERFAMILY SSF53790 16 240 2.75E-71 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 SUPERFAMILY SSF56176 157 424 2.17E-53 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 SUPERFAMILY SSF46548 826 947 2.14E-13 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Gene3D G3DSA:1.10.1060.10 848 949 3.6E-14 T 22-04-2016 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 PANTHER PTHR11748 167 341 6.3E-32 T 22-04-2016 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 PANTHER PTHR11748 607 817 6.3E-32 T 22-04-2016 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 PANTHER PTHR11748 407 483 6.3E-32 T 22-04-2016 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Pfam PF11880 Domain of unknown function (DUF3400) 1280 1324 2.9E-24 T 22-04-2016 IPR021817 Protein of unknown function DUF3400 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 916 927 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Pfam PF12447 Protein of unknown function (DUF3683) 19 143 4.4E-53 T 22-04-2016 IPR022153 Protein of unknown function DUF3683 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Pfam PF13183 4Fe-4S dicluster domain 851 930 2.5E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Gene3D G3DSA:3.30.43.10 153 309 8.6E-31 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Pfam PF02913 FAD linked oxidases, C-terminal domain 727 815 2.8E-17 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Pfam PF02913 FAD linked oxidases, C-terminal domain 461 575 1.7E-4 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Pfam PF02754 Cysteine-rich domain 1186 1277 1.9E-4 T 22-04-2016 IPR004017 Cysteine-rich domain RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Pfam PF02754 Cysteine-rich domain 1061 1150 2.3E-6 T 22-04-2016 IPR004017 Cysteine-rich domain RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 Pfam PF01565 FAD binding domain 193 338 2.1E-23 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 SUPERFAMILY SSF55103 461 589 6.54E-37 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS01860 932d22174444dfa0eb08776d31e447a3 1324 SUPERFAMILY SSF55103 735 817 6.54E-37 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.013 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 9.7E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.2E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 SUPERFAMILY SSF50465 304 396 4.32E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 SUPERFAMILY SSF52540 6 221 3.07E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 Gene3D G3DSA:3.40.50.300 4 213 1.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 PANTHER PTHR23115 1 394 2.4E-261 T 22-04-2016 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 2.2E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.1E-58 T 22-04-2016 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 6.4E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 PANTHER PTHR23115:SF151 1 394 2.4E-261 T 22-04-2016 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 Gene3D G3DSA:2.40.30.10 302 395 1.6E-46 T 22-04-2016 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 Gene3D G3DSA:2.40.30.10 214 300 2.8E-36 T 22-04-2016 RMET_RS16760 4ca0e07b973d085ec29e6f76714155d5 396 SUPERFAMILY SSF50447 207 303 7.66E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.013 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 9.7E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.2E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 SUPERFAMILY SSF50465 304 396 4.32E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 SUPERFAMILY SSF52540 6 221 3.07E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 Gene3D G3DSA:3.40.50.300 4 213 1.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 PANTHER PTHR23115 1 394 2.4E-261 T 22-04-2016 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 2.2E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.1E-58 T 22-04-2016 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 6.4E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 PANTHER PTHR23115:SF151 1 394 2.4E-261 T 22-04-2016 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 Gene3D G3DSA:2.40.30.10 302 395 1.6E-46 T 22-04-2016 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 Gene3D G3DSA:2.40.30.10 214 300 2.8E-36 T 22-04-2016 RMET_RS16670 4ca0e07b973d085ec29e6f76714155d5 396 SUPERFAMILY SSF50447 207 303 7.66E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 Pfam PF01979 Amidohydrolase family 12 311 2.2E-23 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 44.13 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 PIRSF PIRSF001237 1 344 1.6E-141 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.5E-146 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 PANTHER PTHR11647:SF59 1 319 4.8E-165 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 Gene3D G3DSA:3.20.20.140 1 342 1.6E-137 T 22-04-2016 RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 SUPERFAMILY SSF51556 3 343 1.15E-149 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS02055 11ab4c41afa385de2c03c389f0489f67 344 PANTHER PTHR11647 1 319 4.8E-165 T 22-04-2016 RMET_RS01150 686a647db74855e8e8956c33e763c411 214 Gene3D G3DSA:3.40.50.1820 9 214 6.3E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS01150 686a647db74855e8e8956c33e763c411 214 PANTHER PTHR12277 12 209 1.2E-29 T 22-04-2016 RMET_RS01150 686a647db74855e8e8956c33e763c411 214 PANTHER PTHR12277:SF79 12 209 1.2E-29 T 22-04-2016 RMET_RS01150 686a647db74855e8e8956c33e763c411 214 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 46 129 2.6E-9 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RMET_RS01150 686a647db74855e8e8956c33e763c411 214 SUPERFAMILY SSF53474 3 213 2.23E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS04990 cef637680d58ba6028a47687a0f87286 273 SUPERFAMILY SSF56317 6 271 6.8E-82 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS04990 cef637680d58ba6028a47687a0f87286 273 PANTHER PTHR23088:SF27 6 271 2.6E-95 T 22-04-2016 RMET_RS04990 cef637680d58ba6028a47687a0f87286 273 PANTHER PTHR23088 6 271 2.6E-95 T 22-04-2016 RMET_RS04990 cef637680d58ba6028a47687a0f87286 273 Gene3D G3DSA:3.60.110.10 3 271 3.6E-84 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS04990 cef637680d58ba6028a47687a0f87286 273 Pfam PF00795 Carbon-nitrogen hydrolase 8 263 3.4E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS07895 fa04f452ffdef6b25da6c54594cc4c19 198 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 6 196 4.1E-81 T 22-04-2016 IPR018715 Protein of unknown function DUF2239 RMET_RS09470 07fa6dc80517b1ff632582240163119c 174 PANTHER PTHR21248 29 170 2.7E-33 T 22-04-2016 RMET_RS09470 07fa6dc80517b1ff632582240163119c 174 Gene3D G3DSA:3.30.870.10 31 171 2.0E-34 T 22-04-2016 RMET_RS09470 07fa6dc80517b1ff632582240163119c 174 SUPERFAMILY SSF56024 25 171 3.36E-37 T 22-04-2016 RMET_RS09470 07fa6dc80517b1ff632582240163119c 174 Pfam PF13091 PLD-like domain 40 165 1.2E-25 T 22-04-2016 IPR025202 Phospholipase D-like domain RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 Gene3D G3DSA:2.30.38.10 364 438 4.0E-16 T 22-04-2016 RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 PANTHER PTHR24096 1 543 9.5E-237 T 22-04-2016 RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 Pfam PF00501 AMP-binding enzyme 38 445 1.5E-80 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 536 3.8E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 Gene3D G3DSA:3.40.50.980 194 342 5.1E-32 T 22-04-2016 RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 PANTHER PTHR24096:SF136 1 543 9.5E-237 T 22-04-2016 RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 Gene3D G3DSA:3.30.300.30 440 543 5.2E-27 T 22-04-2016 RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 SUPERFAMILY SSF56801 13 544 5.76E-130 T 22-04-2016 RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 Gene3D G3DSA:3.40.50.980 169 193 4.6E-29 T 22-04-2016 RMET_RS08610 7c6000379728b8184a688cc56b3671fc 548 Gene3D G3DSA:3.40.50.980 17 129 4.6E-29 T 22-04-2016 RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 3.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 Pfam PF03466 LysR substrate binding domain 92 294 6.0E-41 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 PANTHER PTHR30537:SF28 1 295 8.2E-116 T 22-04-2016 RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 SUPERFAMILY SSF46785 5 113 1.53E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 SUPERFAMILY SSF53850 92 295 3.41E-42 T 22-04-2016 RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 Gene3D G3DSA:3.40.190.10 92 167 3.5E-8 T 22-04-2016 RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 Gene3D G3DSA:3.40.190.10 168 262 1.7E-20 T 22-04-2016 RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 Gene3D G3DSA:1.10.10.10 7 86 4.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09505 309e776ec171b44bb8d9da023e111c81 301 PANTHER PTHR30537 1 295 8.2E-116 T 22-04-2016 RMET_RS03575 eab47cc2bb458cf81e510d651d689d88 247 Gene3D G3DSA:3.40.50.150 35 230 4.6E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS03575 eab47cc2bb458cf81e510d651d689d88 247 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 24 241 3.8E-85 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RMET_RS03575 eab47cc2bb458cf81e510d651d689d88 247 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 22 247 38.959 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RMET_RS03575 eab47cc2bb458cf81e510d651d689d88 247 PANTHER PTHR10108:SF910 13 245 1.6E-112 T 22-04-2016 RMET_RS03575 eab47cc2bb458cf81e510d651d689d88 247 SUPERFAMILY SSF53335 26 247 7.28E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS03575 eab47cc2bb458cf81e510d651d689d88 247 PANTHER PTHR10108 13 245 1.6E-112 T 22-04-2016 RMET_RS03575 eab47cc2bb458cf81e510d651d689d88 247 Pfam PF13489 Methyltransferase domain 63 217 1.4E-21 T 22-04-2016 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.6E-55 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 PANTHER PTHR30204:SF16 1 127 1.3E-57 T 22-04-2016 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 Pfam PF09278 MerR, DNA binding 44 108 9.6E-23 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 Pfam PF00376 MerR family regulatory protein 2 39 1.3E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 SMART SM00422 1 70 6.9E-33 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 SUPERFAMILY SSF46955 1 126 4.4E-39 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 PANTHER PTHR30204 1 127 1.3E-57 T 22-04-2016 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 Gene3D G3DSA:1.10.1660.10 1 55 2.7E-26 T 22-04-2016 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 5.0E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 5.0E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 5.0E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17700 c261cbefd9a6910f600063ff4ca51e69 139 Gene3D G3DSA:1.10.1660.10 56 131 1.1E-30 T 22-04-2016 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 Pfam PF01979 Amidohydrolase family 68 436 1.0E-25 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 SUPERFAMILY SSF51338 18 70 1.17E-31 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 SUPERFAMILY SSF51338 382 453 1.17E-31 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 Gene3D G3DSA:3.20.20.140 85 420 3.1E-96 T 22-04-2016 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 SUPERFAMILY SSF51556 71 383 4.15E-95 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 34 439 1.5E-90 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 Gene3D G3DSA:2.30.40.10 19 84 4.4E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 PANTHER PTHR11647 1 462 1.9E-128 T 22-04-2016 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 PANTHER PTHR11647:SF1 1 462 1.9E-128 T 22-04-2016 RMET_RS05550 c4988cf6d16aae4e1c308c331b886893 465 ProSitePatterns PS00483 Dihydroorotase signature 2. 318 329 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS05060 c61f9200cb1610df2eb3efbf684d7ce8 433 PANTHER PTHR40457 215 421 9.8E-21 T 22-04-2016 RMET_RS05060 c61f9200cb1610df2eb3efbf684d7ce8 433 Pfam PF02253 Phospholipase A1 215 428 1.6E-39 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RMET_RS05060 c61f9200cb1610df2eb3efbf684d7ce8 433 PRINTS PR01486 Bacterial phospholipase A1 protein signature 213 230 4.8E-13 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RMET_RS05060 c61f9200cb1610df2eb3efbf684d7ce8 433 PRINTS PR01486 Bacterial phospholipase A1 protein signature 342 360 4.8E-13 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RMET_RS05060 c61f9200cb1610df2eb3efbf684d7ce8 433 PRINTS PR01486 Bacterial phospholipase A1 protein signature 403 423 4.8E-13 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RMET_RS05060 c61f9200cb1610df2eb3efbf684d7ce8 433 PRINTS PR01486 Bacterial phospholipase A1 protein signature 260 279 4.8E-13 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RMET_RS05060 c61f9200cb1610df2eb3efbf684d7ce8 433 Gene3D G3DSA:2.40.230.10 213 433 5.3E-59 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RMET_RS05060 c61f9200cb1610df2eb3efbf684d7ce8 433 SUPERFAMILY SSF56931 194 432 1.1E-59 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 83 5.0E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 Gene3D G3DSA:3.40.640.10 159 379 2.4E-56 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 PANTHER PTHR11751:SF10 132 497 7.5E-94 T 22-04-2016 RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 PANTHER PTHR11751 132 497 7.5E-94 T 22-04-2016 RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 SUPERFAMILY SSF53383 130 491 6.48E-82 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 Gene3D G3DSA:1.10.10.10 11 84 2.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 Pfam PF00155 Aminotransferase class I and II 149 431 2.6E-20 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 SUPERFAMILY SSF46785 15 87 1.97E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16695 3eb8fd8e69ffd91e6c8ff30e934a566a 515 SMART SM00345 24 83 5.3E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 20 34 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 191 207 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 1 174 2.0E-75 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 Gene3D G3DSA:3.40.50.1480 1 84 1.7E-94 T 22-04-2016 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 Gene3D G3DSA:3.40.50.1480 120 220 1.7E-94 T 22-04-2016 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 SUPERFAMILY SSF52283 1 170 4.34E-66 T 22-04-2016 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 SUPERFAMILY SSF51735 169 245 2.24E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 SMART SM00997 169 246 1.2E-18 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 PANTHER PTHR23420 119 245 1.7E-189 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 PANTHER PTHR23420 1 83 1.7E-189 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 SMART SM00996 1 246 9.3E-72 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS18950 27fb23a6eb74f77de597a59f185759ec 246 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 169 244 1.3E-38 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 PANTHER PTHR11986 14 462 4.6E-158 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 Gene3D G3DSA:3.40.640.10 76 358 5.2E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 SUPERFAMILY SSF53383 13 457 5.36E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 PIRSF PIRSF000521 41 457 5.4E-24 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 Gene3D G3DSA:3.90.1150.10 14 75 7.8E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 Gene3D G3DSA:3.90.1150.10 361 457 7.8E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 23 441 4.5E-148 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 PANTHER PTHR11986:SF8 14 462 4.6E-158 T 22-04-2016 RMET_RS00585 c28e70e36c5d8a6a8cffe55297f9e6ac 468 Pfam PF00202 Aminotransferase class-III 38 453 2.6E-106 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS12425 33217500e21b0475b83c29f62f0f051a 233 Gene3D G3DSA:3.40.50.300 1 228 7.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12425 33217500e21b0475b83c29f62f0f051a 233 PANTHER PTHR24220:SF568 3 232 1.3E-132 T 22-04-2016 RMET_RS12425 33217500e21b0475b83c29f62f0f051a 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS12425 33217500e21b0475b83c29f62f0f051a 233 Pfam PF00005 ABC transporter 17 161 2.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS12425 33217500e21b0475b83c29f62f0f051a 233 SMART SM00382 26 227 6.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12425 33217500e21b0475b83c29f62f0f051a 233 PIRSF PIRSF039137 1 233 3.0E-107 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RMET_RS12425 33217500e21b0475b83c29f62f0f051a 233 PANTHER PTHR24220 3 232 1.3E-132 T 22-04-2016 RMET_RS12425 33217500e21b0475b83c29f62f0f051a 233 SUPERFAMILY SSF52540 2 230 4.39E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06285 b4edf90585b822eaeeba3924ebd8b3fd 172 PANTHER PTHR23091:SF237 1 153 2.2E-31 T 22-04-2016 RMET_RS06285 b4edf90585b822eaeeba3924ebd8b3fd 172 Gene3D G3DSA:3.40.630.30 1 136 2.7E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS06285 b4edf90585b822eaeeba3924ebd8b3fd 172 Pfam PF13527 Acetyltransferase (GNAT) domain 5 133 1.3E-13 T 22-04-2016 RMET_RS06285 b4edf90585b822eaeeba3924ebd8b3fd 172 PANTHER PTHR23091 1 153 2.2E-31 T 22-04-2016 RMET_RS06285 b4edf90585b822eaeeba3924ebd8b3fd 172 SUPERFAMILY SSF55729 4 151 1.03E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 Gene3D G3DSA:2.30.130.10 3 71 3.3E-26 T 22-04-2016 IPR015947 PUA-like domain RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 PANTHER PTHR11061 3 397 5.6E-107 T 22-04-2016 RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 SUPERFAMILY SSF88697 1 71 6.63E-19 T 22-04-2016 IPR015947 PUA-like domain RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 Gene3D G3DSA:3.40.50.150 186 395 1.5E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 352 1.8E-28 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 SUPERFAMILY SSF53335 78 393 1.41E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 SMART SM00359 2 87 2.0E-16 T 22-04-2016 IPR002478 PUA domain GO:0003723 RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 PANTHER PTHR11061:SF12 3 397 5.6E-107 T 22-04-2016 RMET_RS01135 6a1f68fb3a84bc476c6598296b75d0e1 397 Gene3D G3DSA:3.30.750.80 73 180 6.1E-37 T 22-04-2016 RMET_RS00935 bfb8e9e88d8b77545a18769f4950ac56 314 PANTHER PTHR11807:SF16 6 258 3.8E-107 T 22-04-2016 RMET_RS00935 bfb8e9e88d8b77545a18769f4950ac56 314 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 2 263 56.289 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 RMET_RS00935 bfb8e9e88d8b77545a18769f4950ac56 314 Gene3D G3DSA:3.40.50.620 21 199 3.2E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS00935 bfb8e9e88d8b77545a18769f4950ac56 314 SUPERFAMILY SSF52402 20 248 1.28E-52 T 22-04-2016 RMET_RS00935 bfb8e9e88d8b77545a18769f4950ac56 314 Pfam PF01171 PP-loop family 34 194 4.0E-14 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RMET_RS00935 bfb8e9e88d8b77545a18769f4950ac56 314 PANTHER PTHR11807 6 258 3.8E-107 T 22-04-2016 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Pfam PF02810 SEC-C motif 910 928 2.2E-10 T 22-04-2016 IPR004027 SEC-C motif RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Gene3D G3DSA:3.40.50.300 421 629 6.5E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 SMART SM00958 228 361 2.3E-78 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 SUPERFAMILY SSF81886 906 918 2.62E-80 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 SUPERFAMILY SSF81886 632 850 2.62E-80 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 ProSitePatterns PS01312 SecA family signature. 503 518 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Gene3D G3DSA:1.10.3060.10 658 841 2.2E-56 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 19.943 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PRINTS PR00906 SecA protein signature 101 115 5.2E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PRINTS PR00906 SecA protein signature 117 127 5.2E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PRINTS PR00906 SecA protein signature 63 87 5.2E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PRINTS PR00906 SecA protein signature 170 190 5.2E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PRINTS PR00906 SecA protein signature 342 364 5.2E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PRINTS PR00906 SecA protein signature 416 429 5.2E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PRINTS PR00906 SecA protein signature 379 396 5.2E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 SUPERFAMILY SSF81767 230 371 3.66E-43 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 SUPERFAMILY SSF52540 421 628 4.05E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Gene3D G3DSA:3.90.1440.10 230 371 9.3E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PANTHER PTHR30612 5 523 0.0 T 22-04-2016 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 PANTHER PTHR30612 560 930 0.0 T 22-04-2016 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 SMART SM00957 6 405 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Gene3D G3DSA:3.40.50.300 372 419 6.9E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Gene3D G3DSA:3.40.50.300 3 228 6.9E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Pfam PF07517 SecA DEAD-like domain 6 405 3.0E-132 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 SUPERFAMILY SSF52540 371 418 1.63E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 SUPERFAMILY SSF52540 5 228 1.63E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 827 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Pfam PF01043 SecA preprotein cross-linking domain 232 361 2.3E-37 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RMET_RS15615 03045c6b5d11b37980f0d25964446c01 930 Pfam PF07516 SecA Wing and Scaffold domain 627 839 2.1E-66 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 149 419 1.4E-101 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 PANTHER PTHR11564:SF16 120 419 1.0E-121 T 22-04-2016 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 SMART SM00962 220 420 1.2E-110 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 Pfam PF00448 SRP54-type protein, GTPase domain 221 420 1.1E-71 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 SMART SM00963 130 206 2.3E-15 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 SMART SM00382 219 398 1.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 Gene3D G3DSA:1.20.120.140 150 231 1.2E-27 T 22-04-2016 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 149 420 58.856 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 Gene3D G3DSA:3.40.50.300 232 420 6.0E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 SUPERFAMILY SSF52540 218 419 1.17E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 Pfam PF02881 SRP54-type protein, helical bundle domain 148 201 2.4E-9 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 PANTHER PTHR11564 120 419 1.0E-121 T 22-04-2016 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 SUPERFAMILY SSF47364 125 200 7.07E-17 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS01430 dc1d598fd710280b315ba1303f43a8f8 420 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 393 406 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS07520 33103036dd4d177972c9d99aa90adbab 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 279 9.7E-84 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS07520 33103036dd4d177972c9d99aa90adbab 286 SUPERFAMILY SSF51569 2 280 3.11E-80 T 22-04-2016 RMET_RS07520 33103036dd4d177972c9d99aa90adbab 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 255 1.8E-65 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS07520 33103036dd4d177972c9d99aa90adbab 286 Gene3D G3DSA:3.20.20.70 1 279 5.7E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS07520 33103036dd4d177972c9d99aa90adbab 286 PIRSF PIRSF001359 1 281 2.2E-74 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS07520 33103036dd4d177972c9d99aa90adbab 286 PANTHER PTHR30304 1 280 9.4E-70 T 22-04-2016 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 32 535 4.2E-211 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 Gene3D G3DSA:1.20.210.10 18 535 5.5E-218 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 259 313 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PANTHER PTHR10422:SF27 17 536 0.0 T 22-04-2016 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PANTHER PTHR10422 17 536 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 SUPERFAMILY SSF81442 28 535 1.96E-191 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 303 318 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 78 101 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 440 461 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 390 409 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 327 348 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 257 278 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 31 56 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 362 380 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 148 160 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 206 225 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 105 129 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 177 195 1.7E-118 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01335 e075816a4eebdc42f6f4a6d0049be573 536 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 40 480 3.1E-151 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS01575 a4f6f42b766a74640065a8f21f4b4135 192 SUPERFAMILY SSF52317 3 187 3.73E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS01575 a4f6f42b766a74640065a8f21f4b4135 192 Gene3D G3DSA:3.40.50.880 2 186 4.2E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS01575 a4f6f42b766a74640065a8f21f4b4135 192 Pfam PF01965 DJ-1/PfpI family 3 184 2.7E-54 T 22-04-2016 IPR002818 DJ-1/PfpI RMET_RS01575 a4f6f42b766a74640065a8f21f4b4135 192 PANTHER PTHR11019:SF112 111 144 5.0E-59 T 22-04-2016 RMET_RS01575 a4f6f42b766a74640065a8f21f4b4135 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 186 2.1E-59 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 RMET_RS01575 a4f6f42b766a74640065a8f21f4b4135 192 PANTHER PTHR11019 111 144 5.0E-59 T 22-04-2016 RMET_RS01575 a4f6f42b766a74640065a8f21f4b4135 192 PANTHER PTHR11019 3 93 5.0E-59 T 22-04-2016 RMET_RS01575 a4f6f42b766a74640065a8f21f4b4135 192 PANTHER PTHR11019:SF112 3 93 5.0E-59 T 22-04-2016 RMET_RS13680 8558e5fc1e789736f43f41eec434cd41 391 Gene3D G3DSA:3.40.640.10 9 255 1.5E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS13680 8558e5fc1e789736f43f41eec434cd41 391 SUPERFAMILY SSF53383 8 386 1.36E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS13680 8558e5fc1e789736f43f41eec434cd41 391 PANTHER PTHR30244 10 389 1.1E-89 T 22-04-2016 RMET_RS13680 8558e5fc1e789736f43f41eec434cd41 391 Gene3D G3DSA:3.90.1150.10 257 382 2.5E-14 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS13680 8558e5fc1e789736f43f41eec434cd41 391 PIRSF PIRSF000390 1 390 1.6E-117 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RMET_RS13680 8558e5fc1e789736f43f41eec434cd41 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 381 4.1E-99 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RMET_RS13680 8558e5fc1e789736f43f41eec434cd41 391 PANTHER PTHR30244:SF16 10 389 1.1E-89 T 22-04-2016 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PRINTS PR00412 Epoxide hydrolase signature 282 304 2.9E-14 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PRINTS PR00412 Epoxide hydrolase signature 249 265 2.9E-14 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PRINTS PR00412 Epoxide hydrolase signature 38 56 2.9E-14 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PRINTS PR00412 Epoxide hydrolase signature 117 130 2.9E-14 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PRINTS PR00412 Epoxide hydrolase signature 103 116 2.9E-14 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 SUPERFAMILY SSF53474 12 305 2.7E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 Gene3D G3DSA:3.40.50.1820 10 305 7.9E-78 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PANTHER PTHR10992:SF793 191 303 2.3E-79 T 22-04-2016 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PANTHER PTHR10992:SF793 11 175 2.3E-79 T 22-04-2016 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PANTHER PTHR10992 191 303 2.3E-79 T 22-04-2016 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PANTHER PTHR10992 11 175 2.3E-79 T 22-04-2016 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 2.2E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 2.2E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 2.2E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS09235 685339eb1dfa2edcb420c99fc8a7c788 306 Pfam PF00561 alpha/beta hydrolase fold 32 292 5.3E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 Gene3D G3DSA:3.40.50.2300 2 120 2.9E-35 T 22-04-2016 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 SMART SM00421 153 210 2.2E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 SUPERFAMILY SSF46894 145 215 5.78E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 PANTHER PTHR26402:SF151 3 215 9.2E-75 T 22-04-2016 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 PANTHER PTHR26402 3 215 9.2E-75 T 22-04-2016 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 1.7E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 Pfam PF00072 Response regulator receiver domain 5 117 3.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 Gene3D G3DSA:1.10.10.10 121 216 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 SUPERFAMILY SSF52172 2 133 9.82E-35 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS10445 235d6eee96eaa1b044e3159308ffc2c5 217 SMART SM00448 3 116 7.9E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 SUPERFAMILY SSF82866 196 342 4.19E-33 T 22-04-2016 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 PANTHER PTHR32063:SF34 153 342 3.9E-152 T 22-04-2016 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 Pfam PF00873 AcrB/AcrD/AcrF family 2 91 4.7E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 Pfam PF00873 AcrB/AcrD/AcrF family 159 341 7.9E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 Gene3D G3DSA:1.10.3850.10 181 341 4.1E-41 T 22-04-2016 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 PANTHER PTHR32063:SF34 1 90 3.9E-152 T 22-04-2016 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 PANTHER PTHR32063 1 90 3.9E-152 T 22-04-2016 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 PRINTS PR00702 Acriflavin resistance protein family signature 263 284 3.7E-34 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 PRINTS PR00702 Acriflavin resistance protein family signature 236 259 3.7E-34 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 PRINTS PR00702 Acriflavin resistance protein family signature 291 315 3.7E-34 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 Gene3D G3DSA:3.30.2090.10 157 169 1.8E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 Gene3D G3DSA:3.30.2090.10 25 92 1.8E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 SUPERFAMILY SSF82714 25 92 1.57E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS20605 b37347a0e90153b4de32e0f31968be39 342 PANTHER PTHR32063 153 342 3.9E-152 T 22-04-2016 RMET_RS12085 12fdebaab376dcf4250dc3e95046127f 199 PIRSF PIRSF000847 1 192 6.3E-44 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RMET_RS12085 12fdebaab376dcf4250dc3e95046127f 199 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 1.8E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RMET_RS12085 12fdebaab376dcf4250dc3e95046127f 199 PANTHER PTHR14269:SF13 2 192 1.4E-64 T 22-04-2016 RMET_RS12085 12fdebaab376dcf4250dc3e95046127f 199 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 185 4.9E-52 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RMET_RS12085 12fdebaab376dcf4250dc3e95046127f 199 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RMET_RS12085 12fdebaab376dcf4250dc3e95046127f 199 PANTHER PTHR14269 2 192 1.4E-64 T 22-04-2016 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 SUPERFAMILY SSF50621 227 357 1.12E-43 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 TIGRFAM TIGR00492 alr: alanine racemase 4 357 5.2E-113 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 Pfam PF00842 Alanine racemase, C-terminal domain 232 357 2.4E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 Gene3D G3DSA:3.20.20.10 13 207 3.4E-66 T 22-04-2016 IPR029066 PLP-binding barrel RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 SMART SM01005 232 360 6.3E-64 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 Hamap MF_01201 Alanine racemase. 2 360 33.346 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PRINTS PR00992 Alanine racemase signature 265 280 6.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PRINTS PR00992 Alanine racemase signature 121 133 6.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PRINTS PR00992 Alanine racemase signature 248 263 6.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PRINTS PR00992 Alanine racemase signature 190 217 6.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PRINTS PR00992 Alanine racemase signature 27 43 6.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PRINTS PR00992 Alanine racemase signature 61 79 6.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PRINTS PR00992 Alanine racemase signature 342 355 6.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PRINTS PR00992 Alanine racemase signature 155 166 6.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PANTHER PTHR30511:SF4 3 365 5.0E-131 T 22-04-2016 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 PANTHER PTHR30511 3 365 5.0E-131 T 22-04-2016 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 SUPERFAMILY SSF51419 9 233 2.18E-62 T 22-04-2016 IPR029066 PLP-binding barrel RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 Gene3D G3DSA:2.40.37.10 208 359 1.2E-51 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 3.7E-66 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS07055 fc8423e588ac3dce8778e4096ae39283 368 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 SUPERFAMILY SSF82866 72 299 4.19E-40 T 22-04-2016 RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 299 28.997 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 103 285 2.1E-50 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 Pfam PF02355 Protein export membrane protein 115 296 5.5E-64 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 288 2.3E-74 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 Pfam PF07549 SecD/SecF GG Motif 32 59 1.8E-8 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 PANTHER PTHR30081 8 303 1.5E-74 T 22-04-2016 RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 3.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 PRINTS PR01755 Bacterial translocase SecF protein signature 236 251 3.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 3.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 PRINTS PR01755 Bacterial translocase SecF protein signature 204 222 3.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RMET_RS14775 7efe546c33039bfce5877dfdee17ab69 324 Gene3D G3DSA:1.20.1640.10 97 302 8.4E-29 T 22-04-2016 RMET_RS07995 56505476661cecccd329427d3757e42f 429 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 20 426 1.9E-174 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 RMET_RS07995 56505476661cecccd329427d3757e42f 429 PANTHER PTHR23150 18 428 5.1E-113 T 22-04-2016 RMET_RS07995 56505476661cecccd329427d3757e42f 429 Gene3D G3DSA:3.90.1580.10 181 428 1.6E-63 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RMET_RS07995 56505476661cecccd329427d3757e42f 429 PANTHER PTHR23150:SF24 18 428 5.1E-113 T 22-04-2016 RMET_RS07995 56505476661cecccd329427d3757e42f 429 Pfam PF03781 Sulfatase-modifying factor enzyme 1 345 426 1.7E-8 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RMET_RS07995 56505476661cecccd329427d3757e42f 429 Pfam PF03781 Sulfatase-modifying factor enzyme 1 187 324 1.6E-25 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RMET_RS07995 56505476661cecccd329427d3757e42f 429 SUPERFAMILY SSF109854 14 151 6.41E-9 T 22-04-2016 RMET_RS07995 56505476661cecccd329427d3757e42f 429 Pfam PF12867 DinB superfamily 22 151 6.4E-13 T 22-04-2016 IPR024775 DinB-like domain RMET_RS07995 56505476661cecccd329427d3757e42f 429 SUPERFAMILY SSF56436 186 428 6.83E-71 T 22-04-2016 IPR016187 C-type lectin fold RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 ProSitePatterns PS00211 ABC transporters family signature. 435 449 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 Gene3D G3DSA:3.40.50.300 311 529 4.4E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 Gene3D G3DSA:3.40.50.300 2 266 7.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 PANTHER PTHR19211 2 559 0.0 T 22-04-2016 RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 Pfam PF00005 ABC transporter 332 463 8.9E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 Pfam PF00005 ABC transporter 18 178 2.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 Pfam PF16326 ABC transporter C-terminal domain 570 634 2.2E-11 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 SMART SM00382 341 508 4.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 SMART SM00382 26 225 4.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 Pfam PF12848 ABC transporter 217 292 2.7E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 SUPERFAMILY SSF52540 119 256 7.31E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 SUPERFAMILY SSF52540 2 92 7.31E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 PANTHER PTHR19211:SF49 2 559 0.0 T 22-04-2016 RMET_RS07075 5d5b3d857ef4e39f9b402891d7e42463 640 SUPERFAMILY SSF52540 303 518 4.1E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16825 c08d61ed0be554a03f682fcbe880882b 156 Gene3D G3DSA:3.40.50.620 5 151 1.3E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS16825 c08d61ed0be554a03f682fcbe880882b 156 PANTHER PTHR31964:SF26 1 156 3.5E-29 T 22-04-2016 RMET_RS16825 c08d61ed0be554a03f682fcbe880882b 156 SUPERFAMILY SSF52402 6 151 2.93E-35 T 22-04-2016 RMET_RS16825 c08d61ed0be554a03f682fcbe880882b 156 PANTHER PTHR31964 1 156 3.5E-29 T 22-04-2016 RMET_RS16825 c08d61ed0be554a03f682fcbe880882b 156 PRINTS PR01438 Universal stress protein signature 110 122 3.2E-21 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS16825 c08d61ed0be554a03f682fcbe880882b 156 PRINTS PR01438 Universal stress protein signature 6 24 3.2E-21 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS16825 c08d61ed0be554a03f682fcbe880882b 156 PRINTS PR01438 Universal stress protein signature 128 150 3.2E-21 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS16825 c08d61ed0be554a03f682fcbe880882b 156 Pfam PF00582 Universal stress protein family 6 150 6.0E-31 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS00290 4ab8d23519d19a55a65b1b907ad47cd6 380 PANTHER PTHR30474:SF1 1 379 7.8E-140 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RMET_RS00290 4ab8d23519d19a55a65b1b907ad47cd6 380 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 18 375 2.8E-127 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RMET_RS00290 4ab8d23519d19a55a65b1b907ad47cd6 380 PANTHER PTHR30474 1 379 7.8E-140 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RMET_RS00290 4ab8d23519d19a55a65b1b907ad47cd6 380 Pfam PF01098 Cell cycle protein 23 376 4.1E-100 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RMET_RS01970 f56bf66bf3bbfc384b73953306772b42 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 255 2.7E-55 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS01970 f56bf66bf3bbfc384b73953306772b42 258 SUPERFAMILY SSF52096 3 256 9.16E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS01970 f56bf66bf3bbfc384b73953306772b42 258 Gene3D G3DSA:3.90.226.10 3 254 1.2E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS01970 f56bf66bf3bbfc384b73953306772b42 258 PANTHER PTHR11941 3 254 1.0E-82 T 22-04-2016 RMET_RS01970 f56bf66bf3bbfc384b73953306772b42 258 PANTHER PTHR11941:SF17 3 254 1.0E-82 T 22-04-2016 RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 Gene3D G3DSA:3.40.50.20 1 129 4.3E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 SUPERFAMILY SSF56059 83 348 2.02E-71 T 22-04-2016 RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.8E-80 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.7E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 3.8E-222 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 SMART SM00878 336 441 2.9E-63 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 Gene3D G3DSA:3.30.1490.20 130 203 5.2E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.1E-37 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 SUPERFAMILY SSF52440 1 113 1.08E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 Gene3D G3DSA:3.30.470.20 204 444 1.8E-96 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 SUPERFAMILY SSF51246 331 444 1.2E-42 T 22-04-2016 IPR011054 Rudiment single hybrid motif RMET_RS15360 e7d9bd43d3274721ca22d6cef405300f 455 PANTHER PTHR18866 1 447 9.3E-289 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 Gene3D G3DSA:3.50.50.60 2 147 5.5E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 Gene3D G3DSA:3.30.390.30 343 470 7.4E-48 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 336 1.7E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 7.4E-44 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 7.4E-44 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.4E-44 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 7.4E-44 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 184 202 7.4E-44 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 SUPERFAMILY SSF55424 351 472 1.31E-40 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 Gene3D G3DSA:3.50.50.60 148 342 3.8E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 474 1.6E-167 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PANTHER PTHR22912:SF131 1 467 2.4E-230 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PIRSF PIRSF000350 1 473 1.3E-87 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 184 209 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 351 372 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 157 5.8E-78 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 463 9.2E-37 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 PANTHER PTHR22912 1 467 2.4E-230 T 22-04-2016 RMET_RS10245 b82ea7d7190c279f2a76329fcd7a10e9 474 SUPERFAMILY SSF51905 1 344 3.89E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 PANTHER PTHR24096 3 537 1.6E-246 T 22-04-2016 RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 523 1.9E-11 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 Pfam PF00501 AMP-binding enzyme 20 439 1.6E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 PANTHER PTHR24096:SF53 3 537 1.6E-246 T 22-04-2016 RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 Gene3D G3DSA:2.30.38.10 360 433 7.7E-17 T 22-04-2016 RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 Gene3D G3DSA:3.30.300.30 434 532 7.2E-23 T 22-04-2016 RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 Gene3D G3DSA:3.40.50.980 15 190 1.2E-29 T 22-04-2016 RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 SUPERFAMILY SSF56801 7 535 7.85E-132 T 22-04-2016 RMET_RS09325 51814020e559dd7f4aa3b1d600246ad9 541 Gene3D G3DSA:3.40.50.980 191 340 4.8E-31 T 22-04-2016 RMET_RS09610 608eb3c9f0d32a7ee1cf44834930c96c 217 Gene3D G3DSA:3.40.30.10 2 208 1.3E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS09610 608eb3c9f0d32a7ee1cf44834930c96c 217 PANTHER PTHR13887:SF10 4 213 3.1E-41 T 22-04-2016 RMET_RS09610 608eb3c9f0d32a7ee1cf44834930c96c 217 SUPERFAMILY SSF52833 3 211 2.42E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS09610 608eb3c9f0d32a7ee1cf44834930c96c 217 Pfam PF01323 DSBA-like thioredoxin domain 6 208 2.6E-30 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RMET_RS09610 608eb3c9f0d32a7ee1cf44834930c96c 217 PANTHER PTHR13887 4 213 3.1E-41 T 22-04-2016 RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 SUPERFAMILY SSF55785 67 169 2.0E-7 T 22-04-2016 IPR000014 PAS domain RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 Gene3D G3DSA:3.30.450.20 225 320 6.2E-13 T 22-04-2016 RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 Gene3D G3DSA:3.30.450.20 162 190 6.2E-13 T 22-04-2016 RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 Pfam PF13188 PAS domain 176 272 1.0E-9 T 22-04-2016 IPR000014 PAS domain RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 Pfam PF13188 PAS domain 14 111 0.0041 T 22-04-2016 IPR000014 PAS domain RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 Gene3D G3DSA:3.30.450.20 14 29 3.1E-7 T 22-04-2016 RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 Gene3D G3DSA:3.30.450.20 64 158 3.1E-7 T 22-04-2016 RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 SMART SM00267 320 482 3.5E-35 T 22-04-2016 IPR000160 GGDEF domain RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 478 1.2E-30 T 22-04-2016 IPR000160 GGDEF domain RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 Gene3D G3DSA:3.30.70.270 333 478 9.4E-35 T 22-04-2016 RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 SMART SM00086 118 160 21.0 T 22-04-2016 IPR001610 PAC motif RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 SMART SM00086 278 320 0.27 T 22-04-2016 IPR001610 PAC motif RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 328 478 8.8E-30 T 22-04-2016 IPR000160 GGDEF domain RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 PANTHER PTHR10799 360 478 2.3E-12 T 22-04-2016 RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 SUPERFAMILY SSF55073 336 478 1.02E-30 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS04365 aa0316bc9c2eb3ce4ffb1b6bf8496da6 492 SUPERFAMILY SSF55785 212 323 1.03E-11 T 22-04-2016 IPR000014 PAS domain RMET_RS11310 01e398045beca75f9a240e90ef01da73 582 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 189 510 2.3E-131 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE RMET_RS11310 01e398045beca75f9a240e90ef01da73 582 Pfam PF10995 GGDEF I-site like or GIL domain 194 509 3.3E-108 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 SUPERFAMILY SSF53850 92 295 6.21E-36 T 22-04-2016 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 Gene3D G3DSA:3.40.190.10 92 177 7.3E-10 T 22-04-2016 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 PANTHER PTHR30419 1 295 2.0E-99 T 22-04-2016 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 Gene3D G3DSA:1.10.10.10 3 87 3.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 Pfam PF03466 LysR substrate binding domain 91 294 1.7E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 Gene3D G3DSA:3.40.190.10 178 267 1.0E-21 T 22-04-2016 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 PANTHER PTHR30419:SF8 1 295 2.0E-99 T 22-04-2016 RMET_RS08990 5cb782d895a41604e65f54cb1d65a279 296 SUPERFAMILY SSF46785 3 87 6.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08635 c2af05abe913b2fdcbddf2251894520b 277 PANTHER PTHR11941 3 260 1.9E-67 T 22-04-2016 RMET_RS08635 c2af05abe913b2fdcbddf2251894520b 277 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 261 4.9E-38 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS08635 c2af05abe913b2fdcbddf2251894520b 277 Gene3D G3DSA:3.90.226.10 5 260 1.5E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS08635 c2af05abe913b2fdcbddf2251894520b 277 PANTHER PTHR11941:SF86 3 260 1.9E-67 T 22-04-2016 RMET_RS08635 c2af05abe913b2fdcbddf2251894520b 277 SUPERFAMILY SSF52096 2 260 1.17E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS16730 91ca17b1bf68c513e80d846e4a6d2aa8 173 Pfam PF00466 Ribosomal protein L10 5 100 3.2E-22 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RMET_RS16730 91ca17b1bf68c513e80d846e4a6d2aa8 173 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16730 91ca17b1bf68c513e80d846e4a6d2aa8 173 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.326 T 22-04-2016 IPR022973 Ribosomal protein L10 RMET_RS16730 91ca17b1bf68c513e80d846e4a6d2aa8 173 PANTHER PTHR11560 3 161 2.3E-47 T 22-04-2016 RMET_RS16730 91ca17b1bf68c513e80d846e4a6d2aa8 173 SUPERFAMILY SSF160369 4 159 1.11E-49 T 22-04-2016 RMET_RS07445 69247a2de136d3da6ec6b0b5b5bae660 680 Gene3D G3DSA:1.10.287.40 306 385 2.2E-4 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RMET_RS07445 69247a2de136d3da6ec6b0b5b5bae660 680 PANTHER PTHR33375 32 677 3.1E-80 T 22-04-2016 RMET_RS07445 69247a2de136d3da6ec6b0b5b5bae660 680 Pfam PF02195 ParB-like nuclease domain 32 124 3.2E-11 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS07445 69247a2de136d3da6ec6b0b5b5bae660 680 SMART SM00470 30 127 1.2E-15 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS07445 69247a2de136d3da6ec6b0b5b5bae660 680 Gene3D G3DSA:3.90.1530.10 24 132 5.0E-16 T 22-04-2016 RMET_RS07445 69247a2de136d3da6ec6b0b5b5bae660 680 PANTHER PTHR33375:SF2 32 677 3.1E-80 T 22-04-2016 RMET_RS07445 69247a2de136d3da6ec6b0b5b5bae660 680 SUPERFAMILY SSF109709 121 224 5.75E-19 T 22-04-2016 RMET_RS07445 69247a2de136d3da6ec6b0b5b5bae660 680 SUPERFAMILY SSF110849 32 129 1.49E-12 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS06710 878ac404948cdd97d79f5c8c71a3848f 331 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 52 274 6.7E-71 T 22-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 RMET_RS06710 878ac404948cdd97d79f5c8c71a3848f 331 SUPERFAMILY SSF47240 1 329 5.14E-116 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS06710 878ac404948cdd97d79f5c8c71a3848f 331 PIRSF PIRSF000040 1 331 1.9E-96 T 22-04-2016 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 RMET_RS06710 878ac404948cdd97d79f5c8c71a3848f 331 Gene3D G3DSA:1.10.620.20 1 329 3.6E-98 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS15380 e5d8c344980a3d0dfafae6c46f5d79f7 315 Pfam PF00294 pfkB family carbohydrate kinase 28 294 4.2E-44 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RMET_RS15380 e5d8c344980a3d0dfafae6c46f5d79f7 315 PANTHER PTHR10584 1 307 2.8E-97 T 22-04-2016 RMET_RS15380 e5d8c344980a3d0dfafae6c46f5d79f7 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RMET_RS15380 e5d8c344980a3d0dfafae6c46f5d79f7 315 Gene3D G3DSA:3.40.1190.20 3 308 1.9E-58 T 22-04-2016 IPR029056 Ribokinase-like RMET_RS15380 e5d8c344980a3d0dfafae6c46f5d79f7 315 PANTHER PTHR10584:SF15 1 307 2.8E-97 T 22-04-2016 RMET_RS15380 e5d8c344980a3d0dfafae6c46f5d79f7 315 SUPERFAMILY SSF53613 4 300 7.33E-67 T 22-04-2016 IPR029056 Ribokinase-like RMET_RS04840 123c6688f83bf92c0472bf2d1d506e42 206 Gene3D G3DSA:2.60.260.20 24 77 1.5E-19 T 22-04-2016 RMET_RS04840 123c6688f83bf92c0472bf2d1d506e42 206 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 145 24.806 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 RMET_RS04840 123c6688f83bf92c0472bf2d1d506e42 206 SMART SM00988 7 71 2.4E-21 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RMET_RS04840 123c6688f83bf92c0472bf2d1d506e42 206 Pfam PF05194 UreE urease accessory protein, C-terminal domain 78 182 3.4E-17 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RMET_RS04840 123c6688f83bf92c0472bf2d1d506e42 206 Gene3D G3DSA:3.30.70.790 78 149 3.9E-32 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RMET_RS04840 123c6688f83bf92c0472bf2d1d506e42 206 SUPERFAMILY SSF69287 19 76 4.05E-17 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RMET_RS04840 123c6688f83bf92c0472bf2d1d506e42 206 SUPERFAMILY SSF69737 78 144 4.05E-21 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RMET_RS04840 123c6688f83bf92c0472bf2d1d506e42 206 Pfam PF02814 UreE urease accessory protein, N-terminal domain 20 71 6.3E-19 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RMET_RS07210 d1047f792625bc80aa4c2bf61a35e4cf 294 Gene3D G3DSA:1.10.260.40 15 93 5.0E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS07210 d1047f792625bc80aa4c2bf61a35e4cf 294 Pfam PF13560 Helix-turn-helix domain 18 97 8.9E-16 T 22-04-2016 RMET_RS07210 d1047f792625bc80aa4c2bf61a35e4cf 294 PANTHER PTHR35010:SF3 7 287 1.3E-109 T 22-04-2016 RMET_RS07210 d1047f792625bc80aa4c2bf61a35e4cf 294 SUPERFAMILY SSF47413 42 93 7.62E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS07210 d1047f792625bc80aa4c2bf61a35e4cf 294 SMART SM00530 22 94 4.0E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS07210 d1047f792625bc80aa4c2bf61a35e4cf 294 PANTHER PTHR35010 7 287 1.3E-109 T 22-04-2016 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 342 1.9E-128 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 PANTHER PTHR11938 9 344 3.4E-87 T 22-04-2016 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 Pfam PF01180 Dihydroorotate dehydrogenase 51 340 3.1E-87 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 298 318 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 SUPERFAMILY SSF51395 6 343 7.69E-104 T 22-04-2016 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 Gene3D G3DSA:3.20.20.70 4 343 2.5E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 342 51.559 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS06120 af27308a3b198bb33a49c93823db1c09 344 PIRSF PIRSF000164 17 344 2.2E-96 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 Gene3D G3DSA:3.30.450.20 217 267 1.5E-5 T 22-04-2016 RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 541 627 1.4E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 Pfam PF13188 PAS domain 228 284 8.4E-6 T 22-04-2016 IPR000014 PAS domain RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 SUPERFAMILY SSF55785 216 267 2.51E-5 T 22-04-2016 IPR000014 PAS domain RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 SUPERFAMILY SSF55874 516 627 1.31E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 SUPERFAMILY SSF47384 414 486 1.31E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 Gene3D G3DSA:3.30.565.10 494 627 3.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 SMART SM00388 422 489 5.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 PANTHER PTHR24423 202 320 3.5E-41 T 22-04-2016 RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 PANTHER PTHR24423 20 51 3.5E-41 T 22-04-2016 RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 PANTHER PTHR24423 410 618 3.5E-41 T 22-04-2016 RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 SMART SM00387 538 663 7.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 Pfam PF00512 His Kinase A (phospho-acceptor) domain 422 486 9.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15475 5128414a4269228b98fa9e3c2f6f2d6f 678 Gene3D G3DSA:1.10.287.130 416 485 2.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15605 f19f3718642d28a09c6a67f309c3a4f9 303 PANTHER PTHR13779:SF28 25 189 1.5E-74 T 22-04-2016 RMET_RS15605 f19f3718642d28a09c6a67f309c3a4f9 303 PANTHER PTHR13779:SF28 217 288 1.5E-74 T 22-04-2016 RMET_RS15605 f19f3718642d28a09c6a67f309c3a4f9 303 Gene3D G3DSA:3.40.50.300 56 231 9.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15605 f19f3718642d28a09c6a67f309c3a4f9 303 SMART SM00382 85 213 0.0012 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS15605 f19f3718642d28a09c6a67f309c3a4f9 303 PANTHER PTHR13779 25 189 1.5E-74 T 22-04-2016 RMET_RS15605 f19f3718642d28a09c6a67f309c3a4f9 303 PANTHER PTHR13779 217 288 1.5E-74 T 22-04-2016 RMET_RS15605 f19f3718642d28a09c6a67f309c3a4f9 303 Pfam PF05673 Protein of unknown function (DUF815) 30 286 5.7E-104 T 22-04-2016 IPR008533 Domain of unknown function DUF815 RMET_RS15605 f19f3718642d28a09c6a67f309c3a4f9 303 SUPERFAMILY SSF52540 47 194 8.42E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 SUPERFAMILY SSF55816 422 645 1.18E-35 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 Pfam PF02872 5'-nucleotidase, C-terminal domain 426 611 4.8E-23 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 PRINTS PR01607 Apyrase family signature 64 82 1.1E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 PRINTS PR01607 Apyrase family signature 280 297 1.1E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 PRINTS PR01607 Apyrase family signature 308 331 1.1E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 PRINTS PR01607 Apyrase family signature 352 372 1.1E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 PRINTS PR01607 Apyrase family signature 586 605 1.1E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 PRINTS PR01607 Apyrase family signature 496 519 1.1E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 PANTHER PTHR11575 65 657 1.8E-155 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 Gene3D G3DSA:3.90.780.10 424 645 8.8E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 PANTHER PTHR11575:SF6 65 657 1.8E-155 T 22-04-2016 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 Pfam PF00149 Calcineurin-like phosphoesterase 71 325 7.8E-5 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 SUPERFAMILY SSF56300 65 421 1.75E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 Gene3D G3DSA:3.60.21.10 60 422 1.4E-80 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS02890 dc953415897a5fa8605dfa34a44d76b8 702 ProSitePatterns PS00786 5'-nucleotidase signature 2. 152 163 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 SUPERFAMILY SSF54211 3 124 3.03E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 PANTHER PTHR33694 1 305 1.4E-132 T 22-04-2016 RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 Gene3D G3DSA:3.30.1700.10 128 282 5.9E-60 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 SUPERFAMILY SSF54211 133 277 1.37E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 Gene3D G3DSA:3.30.230.20 3 125 6.1E-45 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 2.4E-108 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.527 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 PANTHER PTHR33694:SF1 1 305 1.4E-132 T 22-04-2016 RMET_RS15630 d92ddcb37fc6d6539d11d3deed7ea1b5 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 296 1.0E-122 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RMET_RS15555 56a392b2dbaf1994309277ece960732e 309 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 190 202 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RMET_RS15555 56a392b2dbaf1994309277ece960732e 309 PANTHER PTHR12001:SF47 1 309 9.4E-118 T 22-04-2016 RMET_RS15555 56a392b2dbaf1994309277ece960732e 309 Gene3D G3DSA:1.10.600.10 2 308 3.4E-100 T 22-04-2016 IPR008949 Isoprenoid synthase domain RMET_RS15555 56a392b2dbaf1994309277ece960732e 309 SUPERFAMILY SSF48576 3 308 1.92E-98 T 22-04-2016 IPR008949 Isoprenoid synthase domain RMET_RS15555 56a392b2dbaf1994309277ece960732e 309 PANTHER PTHR12001 1 309 9.4E-118 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RMET_RS15555 56a392b2dbaf1994309277ece960732e 309 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 68 82 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RMET_RS15555 56a392b2dbaf1994309277ece960732e 309 Pfam PF00348 Polyprenyl synthetase 18 247 1.1E-76 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 74 97 6.64E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 66 6.64E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 SUPERFAMILY SSF46689 42 125 3.95E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 65 95 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 Gene3D G3DSA:1.10.10.60 43 97 4.5E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 SUPERFAMILY SSF48498 120 232 6.75E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 53 97 1.4E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 Gene3D G3DSA:1.10.357.10 98 228 8.2E-18 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS15770 ddf6c9f358e6b4f4479487e9d11c8638 233 PANTHER PTHR30055 37 227 6.5E-29 T 22-04-2016 RMET_RS17550 f3b53723b1216847263582b6c76ed1ac 318 Gene3D G3DSA:3.40.50.1820 3 314 2.2E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS17550 f3b53723b1216847263582b6c76ed1ac 318 PANTHER PTHR23024 64 309 9.5E-67 T 22-04-2016 RMET_RS17550 f3b53723b1216847263582b6c76ed1ac 318 Pfam PF07859 alpha/beta hydrolase fold 79 291 2.2E-61 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RMET_RS17550 f3b53723b1216847263582b6c76ed1ac 318 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 79 95 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RMET_RS17550 f3b53723b1216847263582b6c76ed1ac 318 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 151 163 - T 22-04-2016 IPR033140 Lipase, GDXG, putative serine active site RMET_RS17550 f3b53723b1216847263582b6c76ed1ac 318 SUPERFAMILY SSF53474 31 315 2.9E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS09465 da564217396d90070ce7ee681a0770b5 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 272 39.603 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RMET_RS09465 da564217396d90070ce7ee681a0770b5 285 PANTHER PTHR37426 2 281 1.2E-105 T 22-04-2016 RMET_RS09465 da564217396d90070ce7ee681a0770b5 285 PANTHER PTHR37426:SF1 2 281 1.2E-105 T 22-04-2016 RMET_RS09465 da564217396d90070ce7ee681a0770b5 285 Gene3D G3DSA:3.40.50.150 1 282 5.6E-117 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS09465 da564217396d90070ce7ee681a0770b5 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 279 1.6E-70 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RMET_RS09465 da564217396d90070ce7ee681a0770b5 285 SUPERFAMILY SSF53335 9 281 3.8E-93 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 5 359 1.9E-142 T 22-04-2016 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00930 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 146 155 2.0E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 121 140 2.0E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 2.0E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 83 92 2.0E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 217 225 2.0E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PANTHER PTHR19370:SF93 5 269 1.3E-73 T 22-04-2016 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PANTHER PTHR19370 5 269 1.3E-73 T 22-04-2016 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 SUPERFAMILY SSF54292 240 357 1.75E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 Gene3D G3DSA:3.40.50.80 101 243 5.5E-39 T 22-04-2016 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 SUPERFAMILY SSF63380 3 110 9.24E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 277 349 3.0E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 Pfam PF00175 Oxidoreductase NAD-binding domain 124 231 2.1E-16 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 SUPERFAMILY SSF52343 113 251 1.96E-35 T 22-04-2016 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 Gene3D G3DSA:2.40.30.10 4 100 6.3E-25 T 22-04-2016 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 Gene3D G3DSA:3.10.20.30 244 360 6.1E-29 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 Pfam PF00970 Oxidoreductase FAD-binding domain 9 109 2.6E-12 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00406 Cytochrome B5 reductase signature 96 110 2.7E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00406 Cytochrome B5 reductase signature 121 140 2.7E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00406 Cytochrome B5 reductase signature 158 169 2.7E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 RMET_RS16945 a8083865ebec473dd15ea041125ba41b 361 PRINTS PR00406 Cytochrome B5 reductase signature 217 225 2.7E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 Gene3D G3DSA:3.40.50.720 1 226 6.3E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 Pfam PF00106 short chain dehydrogenase 3 188 8.7E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 PANTHER PTHR24322 6 130 1.7E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 PANTHER PTHR24322 150 180 1.7E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 PANTHER PTHR24322:SF540 6 130 1.7E-28 T 22-04-2016 RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 PANTHER PTHR24322:SF540 150 180 1.7E-28 T 22-04-2016 RMET_RS00550 f3d985970272dce440b0a654af8a8d6e 226 SUPERFAMILY SSF51735 1 226 6.16E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07110 629384f06422b25803499ac8fa9fc2dd 352 PANTHER PTHR36512 13 351 7.6E-70 T 22-04-2016 RMET_RS07110 629384f06422b25803499ac8fa9fc2dd 352 Gene3D G3DSA:3.60.70.12 16 350 1.5E-125 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RMET_RS07110 629384f06422b25803499ac8fa9fc2dd 352 PANTHER PTHR36512:SF1 13 351 7.6E-70 T 22-04-2016 RMET_RS07110 629384f06422b25803499ac8fa9fc2dd 352 Pfam PF03576 Peptidase family S58 29 339 2.2E-109 T 22-04-2016 IPR005321 Peptidase S58, DmpA RMET_RS07110 629384f06422b25803499ac8fa9fc2dd 352 SUPERFAMILY SSF56266 16 341 4.71E-106 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 SMART SM00433 36 658 1.3E-178 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 5 662 43.814 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 SUPERFAMILY SSF55874 7 223 1.23E-58 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PANTHER PTHR10169:SF45 5 664 0.0 T 22-04-2016 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 590 654 2.2E-23 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 Gene3D G3DSA:3.40.50.670 419 643 3.3E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 Gene3D G3DSA:3.30.565.10 18 223 4.8E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 SUPERFAMILY SSF56719 409 656 2.04E-73 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 Pfam PF01751 Toprim domain 434 532 4.3E-11 T 22-04-2016 IPR006171 Toprim domain RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR01098 Topoisomerase IV subunit B signature 315 331 4.7E-28 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR01098 Topoisomerase IV subunit B signature 260 283 4.7E-28 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR01098 Topoisomerase IV subunit B signature 29 42 4.7E-28 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR01098 Topoisomerase IV subunit B signature 332 347 4.7E-28 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR01098 Topoisomerase IV subunit B signature 383 408 4.7E-28 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR01098 Topoisomerase IV subunit B signature 469 490 4.7E-28 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR01098 Topoisomerase IV subunit B signature 359 382 4.7E-28 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 SUPERFAMILY SSF54211 263 408 1.9E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 Pfam PF00204 DNA gyrase B 267 406 4.7E-32 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 179 3.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 Gene3D G3DSA:3.30.230.10 264 408 2.7E-36 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PANTHER PTHR10169 5 664 0.0 T 22-04-2016 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 ProSitePatterns PS00177 DNA topoisomerase II signature. 437 445 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 SMART SM00387 30 181 9.8E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 594 610 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 504 520 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 542 554 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 522 539 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 69 82 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 287 300 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 435 449 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS12640 166a8084c125cb79d093b2cdcb9713f6 664 PRINTS PR00418 DNA topoisomerase II family signature 34 49 1.6E-57 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS17155 fd88f3b56a85790c8af8b72a7122683c 324 PANTHER PTHR30349:SF32 1 279 3.0E-80 T 22-04-2016 RMET_RS17155 fd88f3b56a85790c8af8b72a7122683c 324 PANTHER PTHR30349 1 279 3.0E-80 T 22-04-2016 RMET_RS17155 fd88f3b56a85790c8af8b72a7122683c 324 PIRSF PIRSF017082 3 323 1.9E-63 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS17155 fd88f3b56a85790c8af8b72a7122683c 324 SUPERFAMILY SSF53850 113 283 1.05E-10 T 22-04-2016 RMET_RS17155 fd88f3b56a85790c8af8b72a7122683c 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 320 1.0E-72 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 SUPERFAMILY SSF52402 1 214 2.37E-53 T 22-04-2016 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 PANTHER PTHR11807 1 415 2.8E-70 T 22-04-2016 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 185 1.7E-50 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 355 400 1.1E-10 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 Pfam PF09179 TilS substrate binding domain 237 302 2.0E-13 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 Pfam PF11734 TilS substrate C-terminal domain 355 428 1.1E-18 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 Gene3D G3DSA:3.40.50.620 1 164 5.6E-11 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 PANTHER PTHR11807:SF2 1 415 2.8E-70 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 Pfam PF01171 PP-loop family 1 183 4.5E-55 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 SUPERFAMILY SSF56037 313 428 9.94E-23 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 SUPERFAMILY SSF82829 236 306 3.79E-13 T 22-04-2016 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 296 20.774 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RMET_RS05470 e9f4c969a72961b6f4b6223dd29c60e6 436 SMART SM00977 354 428 3.4E-14 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RMET_RS10185 558321471ace5f90802973041be549a4 302 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 167 1.3E-49 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RMET_RS10185 558321471ace5f90802973041be549a4 302 SUPERFAMILY SSF46785 1 80 4.62E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10185 558321471ace5f90802973041be549a4 302 PANTHER PTHR34298 1 200 4.2E-60 T 22-04-2016 RMET_RS10185 558321471ace5f90802973041be549a4 302 PANTHER PTHR34298:SF2 1 200 4.2E-60 T 22-04-2016 RMET_RS10185 558321471ace5f90802973041be549a4 302 Gene3D G3DSA:1.10.10.10 1 79 4.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10185 558321471ace5f90802973041be549a4 302 SUPERFAMILY SSF46785 83 158 1.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10185 558321471ace5f90802973041be549a4 302 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 12 172 9.7E-34 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RMET_RS10185 558321471ace5f90802973041be549a4 302 Gene3D G3DSA:1.10.10.10 82 158 1.4E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04225 0b6d4630dc0458b3c102189df0ded15e 323 PIRSF PIRSF017082 1 323 1.8E-80 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04225 0b6d4630dc0458b3c102189df0ded15e 323 SUPERFAMILY SSF53850 102 282 1.48E-12 T 22-04-2016 RMET_RS04225 0b6d4630dc0458b3c102189df0ded15e 323 PANTHER PTHR30349:SF16 1 293 3.5E-94 T 22-04-2016 RMET_RS04225 0b6d4630dc0458b3c102189df0ded15e 323 PANTHER PTHR30349 1 293 3.5E-94 T 22-04-2016 RMET_RS04225 0b6d4630dc0458b3c102189df0ded15e 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 317 5.2E-90 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 PRINTS PR01874 DNA repair protein radA signature 121 138 2.3E-95 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 PRINTS PR01874 DNA repair protein radA signature 210 238 2.3E-95 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 PRINTS PR01874 DNA repair protein radA signature 80 108 2.3E-95 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 PRINTS PR01874 DNA repair protein radA signature 10 34 2.3E-95 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 PRINTS PR01874 DNA repair protein radA signature 171 195 2.3E-95 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 PRINTS PR01874 DNA repair protein radA signature 245 271 2.3E-95 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 PRINTS PR01874 DNA repair protein radA signature 319 342 2.3E-95 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 SUPERFAMILY SSF54211 252 266 6.07E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 SUPERFAMILY SSF54211 300 452 6.07E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 Gene3D G3DSA:3.30.230.10 281 450 2.1E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 Pfam PF13481 AAA domain 61 219 2.6E-18 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 PANTHER PTHR32472 1 452 3.9E-214 T 22-04-2016 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 SMART SM00382 88 241 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 Gene3D G3DSA:3.40.50.300 57 272 2.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 3.9E-198 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RMET_RS07060 7e9701876a4bd53a18531826f90d3f34 455 SUPERFAMILY SSF52540 67 286 1.11E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.2E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.2E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.2E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.2E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 Gene3D G3DSA:2.30.33.40 1 94 2.1E-38 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 SMART SM00883 2 94 5.8E-57 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 SUPERFAMILY SSF50129 1 95 1.51E-34 T 22-04-2016 IPR011032 GroES-like RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.3E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.763 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS03105 0e6a489db35ecd53863c247d0ed87216 96 PANTHER PTHR10772 1 94 1.1E-41 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RMET_RS16555 2965056cc108536e24e2396f60d1883a 118 SUPERFAMILY SSF53137 3 116 2.4E-47 T 22-04-2016 RMET_RS16555 2965056cc108536e24e2396f60d1883a 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 118 2.0E-34 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16555 2965056cc108536e24e2396f60d1883a 118 Gene3D G3DSA:3.30.420.100 24 118 6.6E-34 T 22-04-2016 RMET_RS16555 2965056cc108536e24e2396f60d1883a 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 118 2.9E-35 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16555 2965056cc108536e24e2396f60d1883a 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 118 25.125 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16555 2965056cc108536e24e2396f60d1883a 118 PANTHER PTHR12899 1 118 5.0E-34 T 22-04-2016 RMET_RS03170 6e67f451df161b91b4ccefb171f7ac11 413 Pfam PF08238 Sel1 repeat 56 66 110.0 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03170 6e67f451df161b91b4ccefb171f7ac11 413 Pfam PF08238 Sel1 repeat 104 139 3.9E-7 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03170 6e67f451df161b91b4ccefb171f7ac11 413 SUPERFAMILY SSF81901 35 208 1.13E-23 T 22-04-2016 RMET_RS03170 6e67f451df161b91b4ccefb171f7ac11 413 SMART SM00671 32 66 120.0 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03170 6e67f451df161b91b4ccefb171f7ac11 413 SMART SM00671 104 139 6.4E-7 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03170 6e67f451df161b91b4ccefb171f7ac11 413 Gene3D G3DSA:1.25.40.10 31 207 3.2E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS03170 6e67f451df161b91b4ccefb171f7ac11 413 PANTHER PTHR11102 48 181 1.6E-13 T 22-04-2016 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 SUPERFAMILY SSF52151 2 126 2.27E-70 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 SUPERFAMILY SSF52151 198 291 2.27E-70 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 Pfam PF00698 Acyl transferase domain 5 280 8.2E-33 T 22-04-2016 IPR014043 Acyl transferase RMET_RS12185 658f248f102d5bf728527a742b8645af 311 Gene3D G3DSA:3.30.70.250 123 196 7.2E-29 T 22-04-2016 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 SUPERFAMILY SSF55048 126 197 2.35E-16 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 PANTHER PTHR10982 1 307 2.6E-131 T 22-04-2016 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 291 7.0E-104 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 PIRSF PIRSF000446 1 311 2.4E-105 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 Gene3D G3DSA:3.40.366.10 2 120 1.7E-67 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 Gene3D G3DSA:3.40.366.10 197 290 1.7E-67 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RMET_RS12185 658f248f102d5bf728527a742b8645af 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 305 1.3E-35 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 PANTHER PTHR30371 10 247 2.3E-96 T 22-04-2016 RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 234 6.0E-67 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 248 18.939 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 PANTHER PTHR30371:SF0 10 247 2.3E-96 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 136 2.9E-45 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 92 110 2.9E-45 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 2.9E-45 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 15 42 2.9E-45 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RMET_RS16225 56e8426621e5bd0188c946f1a458fff1 260 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 229 1.6E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RMET_RS01140 2da29bdc8afddcf18875bff97d0cb53e 102 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 14 102 21.92 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 RMET_RS01140 2da29bdc8afddcf18875bff97d0cb53e 102 PANTHER PTHR38036 12 102 5.0E-18 T 22-04-2016 RMET_RS01140 2da29bdc8afddcf18875bff97d0cb53e 102 SUPERFAMILY SSF117991 18 102 1.28E-26 T 22-04-2016 IPR027471 YbeD-like domain RMET_RS01140 2da29bdc8afddcf18875bff97d0cb53e 102 Gene3D G3DSA:3.30.70.1460 18 102 2.9E-31 T 22-04-2016 IPR027471 YbeD-like domain RMET_RS01140 2da29bdc8afddcf18875bff97d0cb53e 102 Pfam PF04359 Protein of unknown function (DUF493) 20 102 1.8E-30 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 RMET_RS01140 2da29bdc8afddcf18875bff97d0cb53e 102 PANTHER PTHR38036:SF1 12 102 5.0E-18 T 22-04-2016 RMET_RS07135 454490469dc458bd0e55501e7b575bb6 184 PANTHER PTHR11908:SF82 3 160 6.9E-20 T 22-04-2016 RMET_RS07135 454490469dc458bd0e55501e7b575bb6 184 SUPERFAMILY SSF47741 100 174 5.1E-22 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS07135 454490469dc458bd0e55501e7b575bb6 184 Gene3D G3DSA:3.10.20.30 5 84 1.5E-17 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS07135 454490469dc458bd0e55501e7b575bb6 184 Pfam PF01799 [2Fe-2S] binding domain 83 168 1.6E-21 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS07135 454490469dc458bd0e55501e7b575bb6 184 PANTHER PTHR11908 3 160 6.9E-20 T 22-04-2016 RMET_RS07135 454490469dc458bd0e55501e7b575bb6 184 Gene3D G3DSA:1.10.150.120 85 174 2.2E-24 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS07135 454490469dc458bd0e55501e7b575bb6 184 SUPERFAMILY SSF54292 7 88 2.36E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS08425 17b19161b7b8cd7ae63b263f3f9fae47 380 PANTHER PTHR21225 1 380 6.9E-214 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS08425 17b19161b7b8cd7ae63b263f3f9fae47 380 PIRSF PIRSF001361 16 377 8.0E-159 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS08425 17b19161b7b8cd7ae63b263f3f9fae47 380 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 26 374 2.6E-162 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS08425 17b19161b7b8cd7ae63b263f3f9fae47 380 Gene3D G3DSA:3.20.20.70 29 376 1.5E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS08425 17b19161b7b8cd7ae63b263f3f9fae47 380 Pfam PF00793 DAHP synthetase I family 65 363 2.6E-105 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RMET_RS08425 17b19161b7b8cd7ae63b263f3f9fae47 380 SUPERFAMILY SSF51569 28 373 1.15E-134 T 22-04-2016 RMET_RS05615 5a57bc3e1fe27c4d5af6c82ec1ef1c23 355 PIRSF PIRSF001439 19 355 1.6E-108 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RMET_RS05615 5a57bc3e1fe27c4d5af6c82ec1ef1c23 355 PANTHER PTHR13812:SF19 1 355 1.1E-73 T 22-04-2016 RMET_RS05615 5a57bc3e1fe27c4d5af6c82ec1ef1c23 355 PANTHER PTHR13812 1 355 1.1E-73 T 22-04-2016 RMET_RS05615 5a57bc3e1fe27c4d5af6c82ec1ef1c23 355 Gene3D G3DSA:3.30.1780.10 24 170 2.8E-41 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal RMET_RS05615 5a57bc3e1fe27c4d5af6c82ec1ef1c23 355 SUPERFAMILY SSF51735 22 354 1.03E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05615 5a57bc3e1fe27c4d5af6c82ec1ef1c23 355 TIGRFAM TIGR03944 dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB 25 354 5.5E-120 T 22-04-2016 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB RMET_RS05615 5a57bc3e1fe27c4d5af6c82ec1ef1c23 355 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 42 346 7.3E-59 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RMET_RS05615 5a57bc3e1fe27c4d5af6c82ec1ef1c23 355 Gene3D G3DSA:3.40.50.720 171 327 5.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 PANTHER PTHR21621 1 317 1.2E-115 T 22-04-2016 RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 SUPERFAMILY SSF52440 1 121 3.74E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 Gene3D G3DSA:3.30.470.20 191 299 3.7E-45 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 Gene3D G3DSA:3.40.50.20 1 127 2.3E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 Gene3D G3DSA:3.30.1490.20 136 190 1.1E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 PANTHER PTHR21621:SF4 1 317 1.2E-115 T 22-04-2016 RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 6.7E-46 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 311 7.0E-130 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 SUPERFAMILY SSF56059 123 310 6.87E-56 T 22-04-2016 RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 163.862 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RMET_RS01235 54805467ca192f2416f34b8ff4758bd8 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 3.2E-72 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 3.5E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 SUPERFAMILY SSF54909 62 149 6.3E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.3E-18 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 Gene3D G3DSA:3.30.70.920 54 137 2.5E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.2E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.2E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.2E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 SMART SM00344 1 110 1.0E-43 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 SUPERFAMILY SSF46785 1 59 3.33E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 Gene3D G3DSA:1.10.10.10 2 53 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 PANTHER PTHR30154:SF17 1 150 1.9E-75 T 22-04-2016 RMET_RS02000 b42030ad2fd5057a7f7954d118f28fa1 152 PANTHER PTHR30154 1 150 1.9E-75 T 22-04-2016 RMET_RS07240 ffe92da3ad1ca3cea82f8e6feff125c2 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 235 3.5E-101 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RMET_RS07240 ffe92da3ad1ca3cea82f8e6feff125c2 236 SUPERFAMILY SSF53633 2 235 7.07E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS07240 ffe92da3ad1ca3cea82f8e6feff125c2 236 PIRSF PIRSF005650 1 236 1.6E-92 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RMET_RS07240 ffe92da3ad1ca3cea82f8e6feff125c2 236 Gene3D G3DSA:3.40.1160.10 2 235 3.8E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS07240 ffe92da3ad1ca3cea82f8e6feff125c2 236 PANTHER PTHR21499 2 234 1.4E-111 T 22-04-2016 RMET_RS07240 ffe92da3ad1ca3cea82f8e6feff125c2 236 PANTHER PTHR21499:SF23 2 234 1.4E-111 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RMET_RS07240 ffe92da3ad1ca3cea82f8e6feff125c2 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 44.538 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RMET_RS07240 ffe92da3ad1ca3cea82f8e6feff125c2 236 Pfam PF00696 Amino acid kinase family 5 214 9.2E-30 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 Pfam PF05746 DALR anticodon binding domain 600 691 5.1E-8 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 259 274 8.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 10 23 8.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 412 431 8.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 55 67 8.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 331 347 8.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 Gene3D G3DSA:1.10.730.10 600 691 4.0E-5 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 SUPERFAMILY SSF109604 354 509 6.28E-12 T 22-04-2016 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 PANTHER PTHR30075 5 707 1.6E-247 T 22-04-2016 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 9 568 4.7E-189 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 6 705 1.6E-188 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02260 867bdb0b7c34a3fddda6463b9917a05f 707 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 6 705 23.906 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Gene3D G3DSA:2.40.240.10 492 578 3.5E-35 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Gene3D G3DSA:1.10.1160.10 291 366 1.4E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Gene3D G3DSA:3.40.50.620 43 112 2.1E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Gene3D G3DSA:3.40.50.620 235 290 2.1E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 4 580 53.816 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Gene3D G3DSA:2.40.240.10 376 491 1.7E-49 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 PANTHER PTHR11451 295 582 7.8E-219 T 22-04-2016 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 PANTHER PTHR11451 44 270 7.8E-219 T 22-04-2016 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Gene3D G3DSA:3.90.800.10 124 232 3.3E-47 T 22-04-2016 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 44 364 5.6E-109 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 368 559 6.2E-59 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 SUPERFAMILY SSF50715 368 579 4.39E-77 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 SUPERFAMILY SSF52374 44 373 3.38E-98 T 22-04-2016 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 PANTHER PTHR11451:SF29 295 582 7.8E-219 T 22-04-2016 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 PANTHER PTHR11451:SF29 44 270 7.8E-219 T 22-04-2016 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 PRINTS PR00987 Glutamyl-tRNA synthetase signature 47 59 1.5E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 PRINTS PR00987 Glutamyl-tRNA synthetase signature 233 243 1.5E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 PRINTS PR00987 Glutamyl-tRNA synthetase signature 76 89 1.5E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 PRINTS PR00987 Glutamyl-tRNA synthetase signature 61 72 1.5E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS04100 a54ca71a1d301da43b40771d97ee16c0 582 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 44 582 3.3E-229 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 RMET_RS06350 cbf47032e230d5057c094dc4ac89acac 157 Gene3D G3DSA:1.20.120.10 45 147 1.2E-9 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 RMET_RS06350 cbf47032e230d5057c094dc4ac89acac 157 Pfam PF01322 Cytochrome C' 99 146 2.5E-7 T 22-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 RMET_RS06350 cbf47032e230d5057c094dc4ac89acac 157 SUPERFAMILY SSF47175 44 146 2.5E-20 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 RMET_RS22595 30ac656a0de182380c8d4d80d7a6b412 138 Gene3D G3DSA:3.40.190.10 103 138 1.4E-6 T 22-04-2016 RMET_RS22595 30ac656a0de182380c8d4d80d7a6b412 138 PANTHER PTHR30118:SF4 1 138 9.3E-24 T 22-04-2016 RMET_RS22595 30ac656a0de182380c8d4d80d7a6b412 138 SUPERFAMILY SSF53850 13 138 8.32E-25 T 22-04-2016 RMET_RS22595 30ac656a0de182380c8d4d80d7a6b412 138 Pfam PF03466 LysR substrate binding domain 19 134 1.9E-16 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS22595 30ac656a0de182380c8d4d80d7a6b412 138 PANTHER PTHR30118 1 138 9.3E-24 T 22-04-2016 RMET_RS22595 30ac656a0de182380c8d4d80d7a6b412 138 Gene3D G3DSA:3.40.190.10 13 102 4.8E-26 T 22-04-2016 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 SUPERFAMILY SSF68912 1 46 4.32E-11 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 Gene3D G3DSA:1.10.720.10 1 47 8.4E-20 T 22-04-2016 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.6E-207 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.6E-21 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 8.9E-15 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 Gene3D G3DSA:2.40.50.140 49 117 2.2E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 SUPERFAMILY SSF52540 90 371 1.29E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 PANTHER PTHR15184 21 141 1.6E-184 T 22-04-2016 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 PANTHER PTHR15184 160 418 1.6E-184 T 22-04-2016 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 SMART SM00959 5 47 1.3E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 Gene3D G3DSA:3.40.50.300 130 418 3.0E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 SMART SM00382 170 349 3.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 241.528 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 SUPERFAMILY SSF50249 49 125 4.68E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 7.1E-31 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 PANTHER PTHR15184:SF34 21 141 1.6E-184 T 22-04-2016 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 PANTHER PTHR15184:SF34 160 418 1.6E-184 T 22-04-2016 RMET_RS10690 4ef8314db0bef0bd2d8eaae28dc0c56b 420 SMART SM00357 52 118 4.6E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RMET_RS01665 a6db759df89d5cac2147d2ff466d0cf9 254 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 5 223 9.9E-125 T 22-04-2016 IPR014063 Arsenate resistance ArsH RMET_RS01665 a6db759df89d5cac2147d2ff466d0cf9 254 PANTHER PTHR30041:SF1 12 246 1.2E-134 T 22-04-2016 RMET_RS01665 a6db759df89d5cac2147d2ff466d0cf9 254 SUPERFAMILY SSF52218 23 224 1.24E-62 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS01665 a6db759df89d5cac2147d2ff466d0cf9 254 Gene3D G3DSA:3.40.50.360 4 225 4.2E-103 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS01665 a6db759df89d5cac2147d2ff466d0cf9 254 Pfam PF03358 NADPH-dependent FMN reductase 31 174 2.7E-26 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RMET_RS01665 a6db759df89d5cac2147d2ff466d0cf9 254 PANTHER PTHR30041 12 246 1.2E-134 T 22-04-2016 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 SUPERFAMILY SSF52210 137 299 1.18E-36 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 Pfam PF13549 ATP-grasp domain 483 700 3.7E-63 T 22-04-2016 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 161 296 8.3E-43 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 PANTHER PTHR33303 461 700 5.7E-184 T 22-04-2016 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 PANTHER PTHR33303 2 441 5.7E-184 T 22-04-2016 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 Gene3D G3DSA:3.40.50.720 5 134 2.7E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 SUPERFAMILY SSF51735 3 142 1.09E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 SUPERFAMILY SSF52210 305 460 1.23E-25 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 SMART SM00881 10 106 2.4E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 Pfam PF13380 CoA binding domain 14 139 6.5E-21 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 PANTHER PTHR33303:SF3 461 700 5.7E-184 T 22-04-2016 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 PANTHER PTHR33303:SF3 2 441 5.7E-184 T 22-04-2016 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 SUPERFAMILY SSF56059 485 701 1.14E-35 T 22-04-2016 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 Gene3D G3DSA:3.30.1490.20 497 561 1.4E-4 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 Gene3D G3DSA:3.40.50.261 301 450 4.6E-6 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS13055 789d053d8dbfcf62f336328cbf58f5bc 708 Gene3D G3DSA:3.40.50.261 135 294 1.6E-24 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 SUPERFAMILY SSF52540 15 254 3.87E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 SMART SM00382 44 226 6.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 Pfam PF09821 C-terminal AAA-associated domain 310 427 1.3E-35 T 22-04-2016 IPR018632 C-terminal AAA-associated domain RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 PANTHER PTHR24220 16 299 1.4E-114 T 22-04-2016 RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 PANTHER PTHR24220 320 429 1.4E-114 T 22-04-2016 RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 PANTHER PTHR24220:SF589 16 299 1.4E-114 T 22-04-2016 RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 PANTHER PTHR24220:SF589 320 429 1.4E-114 T 22-04-2016 RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 Pfam PF00005 ABC transporter 35 174 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 Gene3D G3DSA:3.40.50.300 12 234 4.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15975 afe715d241855612c6fea5f18e2af0e5 448 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS16380 9f23847d05d97a2964e2bed179053dc7 368 SUPERFAMILY SSF56796 4 354 3.01E-119 T 22-04-2016 RMET_RS16380 9f23847d05d97a2964e2bed179053dc7 368 Pfam PF01761 3-dehydroquinate synthase 67 324 9.9E-109 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS16380 9f23847d05d97a2964e2bed179053dc7 368 Gene3D G3DSA:3.40.50.1970 3 172 2.0E-69 T 22-04-2016 RMET_RS16380 9f23847d05d97a2964e2bed179053dc7 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 8.4E-123 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS16380 9f23847d05d97a2964e2bed179053dc7 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 43.003 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS16380 9f23847d05d97a2964e2bed179053dc7 368 PANTHER PTHR21090 1 355 3.6E-192 T 22-04-2016 RMET_RS16380 9f23847d05d97a2964e2bed179053dc7 368 PIRSF PIRSF001455 4 360 1.5E-111 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS16380 9f23847d05d97a2964e2bed179053dc7 368 Gene3D G3DSA:1.20.1090.10 173 355 4.3E-67 T 22-04-2016 RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 Gene3D G3DSA:3.40.190.10 91 185 3.1E-12 T 22-04-2016 RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 Gene3D G3DSA:1.10.10.10 4 88 1.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 PANTHER PTHR30126 3 307 4.8E-109 T 22-04-2016 RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 SUPERFAMILY SSF46785 3 110 3.16E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 PANTHER PTHR30126:SF4 3 307 4.8E-109 T 22-04-2016 RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 Pfam PF03466 LysR substrate binding domain 90 286 1.7E-20 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 Gene3D G3DSA:3.40.190.10 186 255 2.1E-8 T 22-04-2016 RMET_RS12965 2405ef0f2f6d5031a2aebc8dddc75c49 311 SUPERFAMILY SSF53850 90 290 2.35E-23 T 22-04-2016 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 Gene3D G3DSA:1.10.287.130 198 258 8.7E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 SUPERFAMILY SSF55874 261 426 1.31E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 Gene3D G3DSA:3.30.565.10 259 427 2.4E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 Gene3D G3DSA:3.30.450.20 93 197 1.7E-11 T 22-04-2016 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 SUPERFAMILY SSF55785 89 158 1.5E-6 T 22-04-2016 IPR000014 PAS domain RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 9.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 9.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 9.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 9.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 SMART SM00388 206 272 9.4E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 Pfam PF13188 PAS domain 99 144 4.8E-6 T 22-04-2016 IPR000014 PAS domain RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 PANTHER PTHR24423:SF554 65 429 9.0E-111 T 22-04-2016 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 2.1E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 SUPERFAMILY SSF47384 193 271 6.08E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 7.4E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 SMART SM00387 316 428 3.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 Pfam PF11808 Domain of unknown function (DUF3329) 5 89 4.6E-18 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 PANTHER PTHR24423 65 429 9.0E-111 T 22-04-2016 RMET_RS10940 908df03267b6213fef86f9f86ae52643 450 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 5.3E-133 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 RMET_RS10415 5a49d6dfd61fdb73786134a257393b72 163 PANTHER PTHR30154 4 159 2.2E-42 T 22-04-2016 RMET_RS10415 5a49d6dfd61fdb73786134a257393b72 163 Gene3D G3DSA:1.10.10.10 3 56 9.0E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10415 5a49d6dfd61fdb73786134a257393b72 163 Pfam PF13404 AsnC-type helix-turn-helix domain 4 47 1.7E-6 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS10415 5a49d6dfd61fdb73786134a257393b72 163 PANTHER PTHR30154:SF27 4 159 2.2E-42 T 22-04-2016 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 SMART SM00421 155 212 4.5E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 SUPERFAMILY SSF52172 6 131 7.54E-23 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 Pfam PF00072 Response regulator receiver domain 9 120 1.0E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 209 7.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 PANTHER PTHR26402 6 207 9.5E-42 T 22-04-2016 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 SUPERFAMILY SSF46894 149 216 6.12E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 Gene3D G3DSA:1.10.10.10 156 214 1.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 SMART SM00448 6 120 8.8E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14440 628ab8bb820c2821b5f61c390036ad2b 219 Gene3D G3DSA:3.40.50.2300 6 131 2.3E-25 T 22-04-2016 RMET_RS15005 598b824ce9b4bbde10a5f128c85d45b0 292 SMART SM00062 33 270 0.0033 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS15005 598b824ce9b4bbde10a5f128c85d45b0 292 SUPERFAMILY SSF53850 41 243 3.26E-38 T 22-04-2016 RMET_RS15005 598b824ce9b4bbde10a5f128c85d45b0 292 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 37 274 8.4E-71 T 22-04-2016 RMET_RS15005 598b824ce9b4bbde10a5f128c85d45b0 292 Gene3D G3DSA:3.40.190.10 121 255 1.5E-13 T 22-04-2016 RMET_RS15005 598b824ce9b4bbde10a5f128c85d45b0 292 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 7 252 1.4E-71 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 RMET_RS15005 598b824ce9b4bbde10a5f128c85d45b0 292 PANTHER PTHR30024 1 256 2.4E-25 T 22-04-2016 RMET_RS15005 598b824ce9b4bbde10a5f128c85d45b0 292 PANTHER PTHR30024:SF17 1 256 2.4E-25 T 22-04-2016 RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 SUPERFAMILY SSF55326 5 144 1.69E-36 T 22-04-2016 RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 8 319 28.679 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 PIRSF PIRSF005303 4 322 1.7E-78 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 PANTHER PTHR30270:SF0 7 325 4.4E-105 T 22-04-2016 RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 Gene3D G3DSA:3.30.1330.10 8 142 6.6E-48 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 SUPERFAMILY SSF56042 145 308 1.64E-35 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 183 305 1.2E-7 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 31 139 4.9E-26 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 10 322 1.0E-95 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 PANTHER PTHR30270 7 325 4.4E-105 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RMET_RS15270 347bd4547d85631024b024de5a08c61d 325 Gene3D G3DSA:3.90.650.10 147 322 1.8E-39 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS01965 cbaebca292a26ef19ec344be7be690e5 318 Gene3D G3DSA:3.40.50.10170 4 168 2.6E-20 T 22-04-2016 RMET_RS01965 cbaebca292a26ef19ec344be7be690e5 318 SUPERFAMILY SSF82549 1 311 9.68E-50 T 22-04-2016 RMET_RS01965 cbaebca292a26ef19ec344be7be690e5 318 PANTHER PTHR33434 1 313 6.7E-28 T 22-04-2016 RMET_RS01965 cbaebca292a26ef19ec344be7be690e5 318 Gene3D G3DSA:3.30.1180.10 174 312 1.6E-15 T 22-04-2016 RMET_RS01965 cbaebca292a26ef19ec344be7be690e5 318 PANTHER PTHR33434:SF2 1 313 6.7E-28 T 22-04-2016 RMET_RS01965 cbaebca292a26ef19ec344be7be690e5 318 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 311 5.6E-39 T 22-04-2016 IPR003797 DegV RMET_RS08690 c08f14dc273abbd5d3d3d67beb0800da 443 SUPERFAMILY SSF103473 17 425 2.49E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS08690 c08f14dc273abbd5d3d3d67beb0800da 443 Pfam PF07690 Major Facilitator Superfamily 36 385 8.8E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS08690 c08f14dc273abbd5d3d3d67beb0800da 443 Gene3D G3DSA:1.20.1250.20 236 433 1.1E-16 T 22-04-2016 RMET_RS08690 c08f14dc273abbd5d3d3d67beb0800da 443 Gene3D G3DSA:1.20.1250.20 24 206 7.0E-30 T 22-04-2016 RMET_RS08690 c08f14dc273abbd5d3d3d67beb0800da 443 PANTHER PTHR23505 14 439 3.0E-43 T 22-04-2016 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Gene3D G3DSA:3.40.50.300 158 341 2.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 846 1.8E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 4.9E-9 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.1E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Gene3D G3DSA:1.10.1780.10 1 146 1.4E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Gene3D G3DSA:1.10.8.60 342 427 1.2E-36 T 22-04-2016 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Gene3D G3DSA:1.10.8.60 778 857 3.9E-30 T 22-04-2016 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 1.2E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 SMART SM00382 600 742 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 SMART SM00382 197 342 1.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Gene3D G3DSA:3.40.50.300 553 777 6.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 SUPERFAMILY SSF52540 549 855 2.32E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 7.0E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 7.0E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 7.0E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 7.0E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 SMART SM01086 768 857 6.1E-37 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 762 1.0E-54 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 SUPERFAMILY SSF81923 4 155 3.43E-38 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 SUPERFAMILY SSF52540 158 548 6.86E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 PANTHER PTHR11638 1 857 0.0 T 22-04-2016 RMET_RS09820 5738c714b090f4f1cd8bb3cdbd065324 862 PANTHER PTHR11638:SF18 1 857 0.0 T 22-04-2016 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 SUPERFAMILY SSF53041 1 159 1.44E-23 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 Gene3D G3DSA:1.10.10.60 170 212 2.0E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 Gene3D G3DSA:3.40.50.1390 4 143 2.0E-22 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 SMART SM00857 3 162 9.5E-28 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 PANTHER PTHR30461 126 187 3.7E-33 T 22-04-2016 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 PANTHER PTHR30461 1 110 3.7E-33 T 22-04-2016 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 PANTHER PTHR30461:SF4 126 187 3.7E-33 T 22-04-2016 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 PANTHER PTHR30461:SF4 1 110 3.7E-33 T 22-04-2016 RMET_RS12850 d7863ab5777eeb87976a6f2bad34af18 222 Pfam PF00239 Resolvase, N terminal domain 4 160 1.2E-27 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 SUPERFAMILY SSF46785 1 86 8.99E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 Gene3D G3DSA:1.10.10.10 1 86 2.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 Pfam PF03466 LysR substrate binding domain 88 297 3.7E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 PANTHER PTHR30537:SF5 1 299 5.4E-82 T 22-04-2016 RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 SUPERFAMILY SSF53850 89 300 9.46E-37 T 22-04-2016 RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 Gene3D G3DSA:3.40.190.10 91 176 2.1E-17 T 22-04-2016 RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 PANTHER PTHR30537 1 299 5.4E-82 T 22-04-2016 RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS16125 bab70e31c638770573d5204cc0d4af2b 306 Gene3D G3DSA:3.40.190.10 177 263 1.5E-14 T 22-04-2016 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 17 137 9.3E-44 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 Gene3D G3DSA:3.20.20.110 143 455 4.9E-175 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 Gene3D G3DSA:3.30.70.150 16 140 2.9E-61 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 147 455 2.1E-130 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 PANTHER PTHR23321:SF31 18 448 9.3E-294 T 22-04-2016 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 PANTHER PTHR23321 18 448 9.3E-294 T 22-04-2016 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 SUPERFAMILY SSF54966 4 140 2.88E-55 T 22-04-2016 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 2 468 59.45 T 22-04-2016 IPR020888 Ribulose bisphosphate carboxylase, large subunit GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS07560 5a6d6166b8602aa3313fbc1fe0133549 473 SUPERFAMILY SSF51649 143 469 1.22E-143 T 22-04-2016 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 RMET_RS17855 06276546335302c13c8e552767ed9f09 302 Pfam PF03466 LysR substrate binding domain 88 294 4.1E-28 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS17855 06276546335302c13c8e552767ed9f09 302 Gene3D G3DSA:3.40.190.10 183 263 6.5E-6 T 22-04-2016 RMET_RS17855 06276546335302c13c8e552767ed9f09 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17855 06276546335302c13c8e552767ed9f09 302 PANTHER PTHR30419 1 294 1.5E-52 T 22-04-2016 RMET_RS17855 06276546335302c13c8e552767ed9f09 302 SUPERFAMILY SSF46785 3 111 2.45E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17855 06276546335302c13c8e552767ed9f09 302 Gene3D G3DSA:1.10.10.10 4 86 2.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17855 06276546335302c13c8e552767ed9f09 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17855 06276546335302c13c8e552767ed9f09 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17855 06276546335302c13c8e552767ed9f09 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17855 06276546335302c13c8e552767ed9f09 302 Gene3D G3DSA:3.40.190.10 88 182 9.8E-19 T 22-04-2016 RMET_RS17855 06276546335302c13c8e552767ed9f09 302 SUPERFAMILY SSF53850 88 297 5.19E-32 T 22-04-2016 RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 PANTHER PTHR35177:SF2 1 71 3.8E-22 T 22-04-2016 RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 3.1E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 3.1E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 3.1E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.1E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 SUPERFAMILY SSF159127 1 73 1.44E-24 T 22-04-2016 RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 Pfam PF01455 HupF/HypC family 1 66 2.9E-26 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 72 6.3E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06465 8b97ca3119bbb9358dcffc788aafc73d 75 PANTHER PTHR35177 1 71 3.8E-22 T 22-04-2016 RMET_RS06100 ccc187c1c0a471ca0605c0d6a937d25d 264 Pfam PF00005 ABC transporter 22 177 2.4E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS06100 ccc187c1c0a471ca0605c0d6a937d25d 264 Gene3D G3DSA:3.40.50.300 1 233 1.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06100 ccc187c1c0a471ca0605c0d6a937d25d 264 PANTHER PTHR24220:SF534 3 250 8.9E-123 T 22-04-2016 RMET_RS06100 ccc187c1c0a471ca0605c0d6a937d25d 264 SMART SM00382 31 243 2.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06100 ccc187c1c0a471ca0605c0d6a937d25d 264 SUPERFAMILY SSF52540 1 233 5.22E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06100 ccc187c1c0a471ca0605c0d6a937d25d 264 PANTHER PTHR24220 3 250 8.9E-123 T 22-04-2016 RMET_RS09350 0861cd4af9ee20a8c4ca4822dbda9d84 104 Gene3D G3DSA:3.30.70.1500 4 85 2.8E-27 T 22-04-2016 RMET_RS09350 0861cd4af9ee20a8c4ca4822dbda9d84 104 Pfam PF01722 BolA-like protein 12 88 1.1E-27 T 22-04-2016 IPR002634 BolA protein RMET_RS09350 0861cd4af9ee20a8c4ca4822dbda9d84 104 PANTHER PTHR12735 8 90 9.3E-27 T 22-04-2016 RMET_RS09350 0861cd4af9ee20a8c4ca4822dbda9d84 104 SUPERFAMILY SSF82657 5 91 1.07E-25 T 22-04-2016 IPR002634 BolA protein RMET_RS09350 0861cd4af9ee20a8c4ca4822dbda9d84 104 PANTHER PTHR12735:SF24 8 90 9.3E-27 T 22-04-2016 RMET_RS09350 0861cd4af9ee20a8c4ca4822dbda9d84 104 PIRSF PIRSF003113 1 103 4.2E-27 T 22-04-2016 IPR002634 BolA protein RMET_RS12120 514e2ecac34de5dbfc51f9e7be46197f 298 Pfam PF02565 Recombination protein O C terminal 144 289 8.9E-25 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RMET_RS12120 514e2ecac34de5dbfc51f9e7be46197f 298 Gene3D G3DSA:2.40.50.140 63 138 3.2E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12120 514e2ecac34de5dbfc51f9e7be46197f 298 SUPERFAMILY SSF57863 148 276 2.38E-11 T 22-04-2016 RMET_RS12120 514e2ecac34de5dbfc51f9e7be46197f 298 Pfam PF11967 Recombination protein O N terminal 66 138 3.8E-22 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal RMET_RS12120 514e2ecac34de5dbfc51f9e7be46197f 298 SUPERFAMILY SSF50249 65 138 4.63E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12120 514e2ecac34de5dbfc51f9e7be46197f 298 Hamap MF_00201 DNA repair protein RecO [recO]. 63 295 23.948 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RMET_RS12120 514e2ecac34de5dbfc51f9e7be46197f 298 PANTHER PTHR33991 63 298 9.4E-51 T 22-04-2016 RMET_RS12120 514e2ecac34de5dbfc51f9e7be46197f 298 TIGRFAM TIGR00613 reco: DNA repair protein RecO 68 240 2.2E-32 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 5 122 1.7E-50 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 Pfam PF02142 MGS-like domain 19 111 2.6E-15 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 ProSitePatterns PS01335 Methylglyoxal synthase active site. 58 66 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 SUPERFAMILY SSF52335 4 123 4.58E-48 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 PANTHER PTHR30492 6 120 5.1E-54 T 22-04-2016 RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 SMART SM00851 18 111 1.1E-23 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 PIRSF PIRSF006614 1 139 1.6E-52 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 Gene3D G3DSA:3.40.50.1380 3 123 1.9E-54 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS03970 14cfc20c5fed57872d70736c953902af 140 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 5 124 31.711 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RMET_RS30210 fce046d62d84d2a8ada9253b84a2dbc3 64 Gene3D G3DSA:3.40.50.620 1 63 1.1E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS30210 fce046d62d84d2a8ada9253b84a2dbc3 64 PANTHER PTHR11956:SF6 1 63 1.9E-31 T 22-04-2016 RMET_RS30210 fce046d62d84d2a8ada9253b84a2dbc3 64 PRINTS PR01038 Arginyl-tRNA synthetase signature 14 30 2.2E-7 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS30210 fce046d62d84d2a8ada9253b84a2dbc3 64 PRINTS PR01038 Arginyl-tRNA synthetase signature 38 51 2.2E-7 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS30210 fce046d62d84d2a8ada9253b84a2dbc3 64 PANTHER PTHR11956 1 63 1.9E-31 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS30210 fce046d62d84d2a8ada9253b84a2dbc3 64 Pfam PF00750 tRNA synthetases class I (R) 2 60 2.3E-9 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS30210 fce046d62d84d2a8ada9253b84a2dbc3 64 SUPERFAMILY SSF52374 2 62 4.97E-23 T 22-04-2016 RMET_RS30210 fce046d62d84d2a8ada9253b84a2dbc3 64 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 Gene3D G3DSA:1.10.1660.10 57 130 9.4E-26 T 22-04-2016 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.4E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.4E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.4E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 SMART SM00422 2 71 1.6E-27 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 PANTHER PTHR30204 1 119 8.4E-43 T 22-04-2016 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 SUPERFAMILY SSF46955 2 128 2.23E-32 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 PANTHER PTHR30204:SF18 1 119 8.4E-43 T 22-04-2016 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 Gene3D G3DSA:1.10.1660.10 1 56 2.6E-23 T 22-04-2016 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 2 128 1.3E-51 T 22-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 Pfam PF09278 MerR, DNA binding 45 109 1.5E-18 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding RMET_RS11555 201f56cb0332c48dd4d809a079547a8b 132 Pfam PF00376 MerR family regulatory protein 3 40 1.3E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS02920 766135b68d9a7676e71e645f9e24d513 195 Gene3D G3DSA:3.40.50.10610 18 193 5.3E-23 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RMET_RS02920 766135b68d9a7676e71e645f9e24d513 195 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 27 187 7.4E-37 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RMET_RS02920 766135b68d9a7676e71e645f9e24d513 195 SUPERFAMILY SSF159594 24 193 6.54E-33 T 22-04-2016 RMET_RS04210 d483c31582b1c1f92f67ebb0ed9c6916 256 SMART SM00346 13 104 3.8E-25 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS04210 d483c31582b1c1f92f67ebb0ed9c6916 256 SUPERFAMILY SSF46785 14 87 8.24E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04210 d483c31582b1c1f92f67ebb0ed9c6916 256 SUPERFAMILY SSF55781 80 248 1.5E-28 T 22-04-2016 IPR029016 GAF domain-like RMET_RS04210 d483c31582b1c1f92f67ebb0ed9c6916 256 Pfam PF09339 IclR helix-turn-helix domain 16 66 7.7E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS04210 d483c31582b1c1f92f67ebb0ed9c6916 256 Gene3D G3DSA:3.30.450.40 85 246 4.7E-28 T 22-04-2016 IPR029016 GAF domain-like RMET_RS04210 d483c31582b1c1f92f67ebb0ed9c6916 256 PANTHER PTHR30136 1 249 3.3E-43 T 22-04-2016 RMET_RS04210 d483c31582b1c1f92f67ebb0ed9c6916 256 Gene3D G3DSA:1.10.10.10 12 84 1.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12325 ad7724aa145d7318c01009990f4ba6c9 205 PANTHER PTHR30086 1 203 4.2E-45 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS12325 ad7724aa145d7318c01009990f4ba6c9 205 PANTHER PTHR30086:SF14 1 203 4.2E-45 T 22-04-2016 RMET_RS12325 ad7724aa145d7318c01009990f4ba6c9 205 PIRSF PIRSF006324 1 205 5.4E-58 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS12325 ad7724aa145d7318c01009990f4ba6c9 205 Pfam PF01810 LysE type translocator 15 203 7.5E-30 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 Pfam PF01225 Mur ligase family, catalytic domain 31 96 4.3E-10 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 PANTHER PTHR23135 16 459 1.3E-139 T 22-04-2016 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 SUPERFAMILY SSF53244 323 459 1.47E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 Gene3D G3DSA:3.40.1390.10 18 94 3.2E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 PANTHER PTHR23135:SF3 16 459 1.3E-139 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 Pfam PF08245 Mur ligase middle domain 110 303 3.7E-40 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 Gene3D G3DSA:3.40.1190.10 95 321 3.3E-62 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 SUPERFAMILY SSF63418 8 101 1.14E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 7 460 32.362 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 459 4.3E-126 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 Gene3D G3DSA:3.90.190.20 323 460 1.6E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 391 4.8E-15 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15685 9a8bd6a2e890bbdab0980692d4249858 466 SUPERFAMILY SSF53623 105 320 1.27E-46 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 SUPERFAMILY SSF53383 30 456 6.31E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 SUPERFAMILY SSF53383 488 901 9.01E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 SUPERFAMILY SSF53383 944 966 9.01E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 30 965 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 Pfam PF02347 Glycine cleavage system P-protein 472 760 2.9E-11 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 Pfam PF02347 Glycine cleavage system P-protein 30 455 1.5E-176 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 PANTHER PTHR11773 7 974 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 Gene3D G3DSA:3.40.640.10 516 752 1.2E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 Gene3D G3DSA:3.40.640.10 102 320 2.6E-16 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 PANTHER PTHR11773:SF1 7 974 0.0 T 22-04-2016 RMET_RS17500 3e818937c95a56dc3f3b082daa3e97cb 974 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 21 971 25.81 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RMET_RS17680 410fea46bf674c15637b801d654f89e4 241 PANTHER PTHR24220:SF469 10 230 6.1E-89 T 22-04-2016 RMET_RS17680 410fea46bf674c15637b801d654f89e4 241 SUPERFAMILY SSF52540 7 234 7.04E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17680 410fea46bf674c15637b801d654f89e4 241 SMART SM00382 33 220 1.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS17680 410fea46bf674c15637b801d654f89e4 241 PANTHER PTHR24220 10 230 6.1E-89 T 22-04-2016 RMET_RS17680 410fea46bf674c15637b801d654f89e4 241 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS17680 410fea46bf674c15637b801d654f89e4 241 Gene3D G3DSA:3.40.50.300 5 231 2.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17680 410fea46bf674c15637b801d654f89e4 241 Pfam PF00005 ABC transporter 24 168 9.6E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS11350 711600e0d4e76ae8658173bd8ef1f1ac 129 Pfam PF09345 Domain of unknown function (DUF1987) 13 112 1.0E-36 T 22-04-2016 IPR018530 Domain of unknown function DUF1987 RMET_RS11350 711600e0d4e76ae8658173bd8ef1f1ac 129 Gene3D G3DSA:3.30.870.10 45 95 7.5E-4 T 22-04-2016 RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 211 347 1.6E-47 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 Gene3D G3DSA:3.40.50.970 374 575 6.0E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 21 581 2.6E-257 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 Gene3D G3DSA:3.40.50.1220 205 373 2.8E-66 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 SUPERFAMILY SSF52518 388 582 3.93E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 410 558 3.4E-49 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 PANTHER PTHR18968 1 582 0.0 T 22-04-2016 RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 SUPERFAMILY SSF52467 204 377 6.26E-65 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 Gene3D G3DSA:3.40.50.970 20 196 9.2E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 23 186 1.7E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 SUPERFAMILY SSF52518 19 199 4.98E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS04590 6c72f6ee91d85f2a090b5f1f64495456 587 PANTHER PTHR18968:SF116 1 582 0.0 T 22-04-2016 RMET_RS13340 0bca3172055a24b81de07bfc6d5d272d 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 194 3.3E-9 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS13340 0bca3172055a24b81de07bfc6d5d272d 212 PANTHER PTHR10681:SF99 3 207 1.3E-90 T 22-04-2016 RMET_RS13340 0bca3172055a24b81de07bfc6d5d272d 212 Gene3D G3DSA:3.40.30.10 4 157 1.5E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13340 0bca3172055a24b81de07bfc6d5d272d 212 PIRSF PIRSF000239 1 209 2.5E-77 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RMET_RS13340 0bca3172055a24b81de07bfc6d5d272d 212 Gene3D G3DSA:3.30.1020.10 158 211 1.1E-27 T 22-04-2016 RMET_RS13340 0bca3172055a24b81de07bfc6d5d272d 212 PANTHER PTHR10681 3 207 1.3E-90 T 22-04-2016 RMET_RS13340 0bca3172055a24b81de07bfc6d5d272d 212 SUPERFAMILY SSF52833 3 209 2.88E-67 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13340 0bca3172055a24b81de07bfc6d5d272d 212 Pfam PF00578 AhpC/TSA family 6 135 9.9E-30 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS06395 123889416e4d172129a4773336ab046a 372 Pfam PF12698 ABC-2 family transporter protein 32 363 5.3E-38 T 22-04-2016 RMET_RS06395 123889416e4d172129a4773336ab046a 372 PANTHER PTHR30294:SF15 4 359 2.2E-85 T 22-04-2016 RMET_RS06395 123889416e4d172129a4773336ab046a 372 PRINTS PR00164 ABC-2 type transport system membrane protein signature 294 313 3.7E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS06395 123889416e4d172129a4773336ab046a 372 PRINTS PR00164 ABC-2 type transport system membrane protein signature 257 281 3.7E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS06395 123889416e4d172129a4773336ab046a 372 PRINTS PR00164 ABC-2 type transport system membrane protein signature 314 333 3.7E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS06395 123889416e4d172129a4773336ab046a 372 PANTHER PTHR30294 4 359 2.2E-85 T 22-04-2016 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 7.0E-48 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 PANTHER PTHR10210 1 314 3.3E-176 T 22-04-2016 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 315 48.424 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 SUPERFAMILY SSF53271 10 102 2.42E-6 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 6.8E-121 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 5.1E-27 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 PANTHER PTHR10210:SF41 1 314 3.3E-176 T 22-04-2016 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 SMART SM01400 6 123 1.9E-77 T 22-04-2016 RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 Gene3D G3DSA:3.40.50.2020 162 289 2.9E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 SUPERFAMILY SSF53271 71 305 1.43E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS01470 89fcbb3847274913755e6b01511192ea 317 Gene3D G3DSA:3.40.50.2020 2 161 8.3E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 Gene3D G3DSA:1.10.10.10 1 84 1.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 Gene3D G3DSA:3.40.190.10 171 263 4.6E-12 T 22-04-2016 RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 SUPERFAMILY SSF46785 1 110 1.58E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 PANTHER PTHR30427 1 314 1.3E-71 T 22-04-2016 RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 Pfam PF03466 LysR substrate binding domain 90 293 5.0E-36 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 Gene3D G3DSA:3.40.190.10 90 170 5.8E-21 T 22-04-2016 RMET_RS03520 1c8ee95fd32ca16cd2f4f58ff3c0f3c1 317 SUPERFAMILY SSF53850 90 297 7.24E-34 T 22-04-2016 RMET_RS05545 0b3431175b0ae426b7d66b53de003e3c 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 2.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS05545 0b3431175b0ae426b7d66b53de003e3c 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 4.1E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS05545 0b3431175b0ae426b7d66b53de003e3c 186 Gene3D G3DSA:2.160.10.10 9 147 1.3E-35 T 22-04-2016 RMET_RS05545 0b3431175b0ae426b7d66b53de003e3c 186 SUPERFAMILY SSF51161 8 142 3.85E-32 T 22-04-2016 IPR011004 Trimeric LpxA-like RMET_RS05545 0b3431175b0ae426b7d66b53de003e3c 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 87 115 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RMET_RS05545 0b3431175b0ae426b7d66b53de003e3c 186 PANTHER PTHR13061 5 179 1.3E-51 T 22-04-2016 RMET_RS05545 0b3431175b0ae426b7d66b53de003e3c 186 PANTHER PTHR13061:SF8 5 179 1.3E-51 T 22-04-2016 RMET_RS09620 387250658cf741e5ebeca0ded248616d 237 PANTHER PTHR37314 23 225 4.6E-29 T 22-04-2016 RMET_RS09620 387250658cf741e5ebeca0ded248616d 237 Pfam PF06912 Protein of unknown function (DUF1275) 24 226 1.3E-28 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 RMET_RS09620 387250658cf741e5ebeca0ded248616d 237 PANTHER PTHR37314:SF1 23 225 4.6E-29 T 22-04-2016 RMET_RS11925 edfc505c90a799668292b375c2eca389 272 PANTHER PTHR33751:SF3 93 266 1.0E-48 T 22-04-2016 RMET_RS11925 edfc505c90a799668292b375c2eca389 272 Pfam PF00034 Cytochrome c 173 259 2.9E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11925 edfc505c90a799668292b375c2eca389 272 SUPERFAMILY SSF46626 170 258 3.99E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11925 edfc505c90a799668292b375c2eca389 272 SUPERFAMILY SSF46626 87 157 3.49E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11925 edfc505c90a799668292b375c2eca389 272 PANTHER PTHR33751 93 266 1.0E-48 T 22-04-2016 RMET_RS11925 edfc505c90a799668292b375c2eca389 272 Gene3D G3DSA:1.10.760.10 91 159 3.7E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11925 edfc505c90a799668292b375c2eca389 272 Gene3D G3DSA:1.10.760.10 172 259 3.6E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 Pfam PF13567 Domain of unknown function (DUF4131) 11 201 2.7E-30 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 SUPERFAMILY SSF56281 579 843 5.55E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 Pfam PF03772 Competence protein 243 543 7.0E-59 T 22-04-2016 IPR004477 ComEC/Rec2-related protein RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 264 391 3.3E-14 T 22-04-2016 IPR004477 ComEC/Rec2-related protein RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 Pfam PF00753 Metallo-beta-lactamase superfamily 588 785 1.2E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 SMART SM00849 591 790 6.1E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 PANTHER PTHR30619 420 846 1.1E-149 T 22-04-2016 RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 PANTHER PTHR30619 137 398 1.1E-149 T 22-04-2016 RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 PANTHER PTHR30619 1 121 1.1E-149 T 22-04-2016 RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 Gene3D G3DSA:3.60.15.10 581 821 2.2E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 144 819 6.6E-92 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 PANTHER PTHR30619:SF2 420 846 1.1E-149 T 22-04-2016 RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 PANTHER PTHR30619:SF2 137 398 1.1E-149 T 22-04-2016 RMET_RS05245 c161aefd72d9b59bcc71f1b045ed986a 851 PANTHER PTHR30619:SF2 1 121 1.1E-149 T 22-04-2016 RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 66 3.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 SUPERFAMILY SSF48498 90 204 6.4E-18 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 Gene3D G3DSA:1.10.10.60 17 70 8.0E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 65 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 SUPERFAMILY SSF46689 10 92 5.64E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 Gene3D G3DSA:1.10.357.10 71 207 7.6E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 PANTHER PTHR30055 6 244 8.0E-28 T 22-04-2016 RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.9E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS03090 0a54ff24257d31e21e7f38171a455d12 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.9E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS11135 0d93d0d9cecf957d3c5acd040a45ee01 363 SUPERFAMILY SSF51679 19 355 2.09E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS11135 0d93d0d9cecf957d3c5acd040a45ee01 363 Gene3D G3DSA:3.20.20.30 1 355 1.1E-95 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS11135 0d93d0d9cecf957d3c5acd040a45ee01 363 Pfam PF00296 Luciferase-like monooxygenase 11 323 1.4E-79 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS11135 0d93d0d9cecf957d3c5acd040a45ee01 363 PANTHER PTHR30011 1 355 1.8E-159 T 22-04-2016 RMET_RS11135 0d93d0d9cecf957d3c5acd040a45ee01 363 PANTHER PTHR30011:SF29 1 355 1.8E-159 T 22-04-2016 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 Gene3D G3DSA:3.40.50.720 6 92 3.7E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 SUPERFAMILY SSF53244 313 462 2.38E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 SUPERFAMILY SSF53623 91 312 3.01E-70 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 Pfam PF08245 Mur ligase middle domain 110 294 1.2E-26 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 Gene3D G3DSA:3.40.1190.10 94 315 3.3E-81 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 459 1.3E-164 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 Pfam PF01225 Mur ligase family, catalytic domain 8 105 1.6E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 PANTHER PTHR23135:SF5 1 457 2.9E-196 T 22-04-2016 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 Gene3D G3DSA:3.90.190.20 316 464 2.6E-53 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 406 3.4E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 SUPERFAMILY SSF51984 6 92 1.96E-29 T 22-04-2016 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 468 43.014 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15660 89b0d84a1ac73755788bbeea17933d72 471 PANTHER PTHR23135 1 457 2.9E-196 T 22-04-2016 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 PANTHER PTHR36918:SF1 1 161 1.4E-50 T 22-04-2016 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 SUPERFAMILY SSF54611 4 147 5.45E-50 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 Pfam PF02556 Preprotein translocase subunit SecB 10 148 2.7E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 Hamap MF_00821 Protein-export protein SecB [secB]. 1 150 30.667 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 148 1.3E-44 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 Gene3D G3DSA:3.10.420.10 8 155 2.8E-58 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 PANTHER PTHR36918 1 161 1.4E-50 T 22-04-2016 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 78 98 1.2E-27 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 18 35 1.2E-27 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 128 146 1.2E-27 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS01295 1fd5e24001c790330e3fc495e22ace4d 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 102 124 1.2E-27 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 Gene3D G3DSA:3.30.565.10 337 452 2.4E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 Pfam PF17200 Single Cache domain 2 47 189 6.6E-42 T 22-04-2016 IPR033480 Single Cache domain 2 RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 SMART SM01049 42 132 1.7E-30 T 22-04-2016 IPR033480 Single Cache domain 2 RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 PANTHER PTHR24421:SF1 101 462 4.5E-50 T 22-04-2016 RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 Gene3D G3DSA:3.30.450.20 41 184 3.2E-48 T 22-04-2016 RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 450 6.8E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 PIRSF PIRSF037314 1 462 1.5E-191 T 22-04-2016 IPR017171 Signal transduction histidine kinase, MctS RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 SUPERFAMILY SSF55874 323 449 2.88E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 Pfam PF07730 Histidine kinase 249 319 1.8E-15 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 PANTHER PTHR24421 101 462 4.5E-50 T 22-04-2016 RMET_RS17960 f0b6ad3c71d0504e76c8194d61918305 462 SMART SM00387 357 452 7.5E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS13975 2dffe66f44470a16cdda829df05ad5cf 259 PANTHER PTHR34148 1 256 8.7E-47 T 22-04-2016 RMET_RS13975 2dffe66f44470a16cdda829df05ad5cf 259 Pfam PF02654 Cobalamin-5-phosphate synthase 12 250 4.9E-49 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RMET_RS13975 2dffe66f44470a16cdda829df05ad5cf 259 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 259 51.018 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RMET_RS13975 2dffe66f44470a16cdda829df05ad5cf 259 PANTHER PTHR34148:SF1 1 256 8.7E-47 T 22-04-2016 RMET_RS14685 79bd27c6fba5478039de429082415b5a 128 Pfam PF03788 LrgA family 12 105 5.8E-31 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 RMET_RS14685 79bd27c6fba5478039de429082415b5a 128 PANTHER PTHR33931 1 111 2.8E-31 T 22-04-2016 RMET_RS14685 79bd27c6fba5478039de429082415b5a 128 PANTHER PTHR33931:SF2 1 111 2.8E-31 T 22-04-2016 RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 PANTHER PTHR24960 24 423 1.2E-130 T 22-04-2016 RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 Gene3D G3DSA:1.10.1060.10 247 304 2.1E-7 T 22-04-2016 RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 384 506 1.4E-24 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 Gene3D G3DSA:3.30.70.20 305 352 7.3E-8 T 22-04-2016 RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 Gene3D G3DSA:2.60.40.10 384 507 7.1E-28 T 22-04-2016 IPR013783 Immunoglobulin-like fold RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 296 307 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 Pfam PF13746 4Fe-4S dicluster domain 243 349 2.0E-43 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 PANTHER PTHR24960:SF45 24 423 1.2E-130 T 22-04-2016 RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 Pfam PF12801 4Fe-4S binding domain 119 160 7.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 65 504 7.4E-153 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 SUPERFAMILY SSF54862 129 151 6.63E-34 T 22-04-2016 RMET_RS10205 2bb6c24a3f5b6b48f9616afd47ffcf66 509 SUPERFAMILY SSF54862 197 392 6.63E-34 T 22-04-2016 RMET_RS11125 2ad040726f79ac1b5f08d54276b46613 206 Gene3D G3DSA:2.60.120.10 50 187 1.1E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS11125 2ad040726f79ac1b5f08d54276b46613 206 Gene3D G3DSA:1.20.5.440 5 49 1.7E-21 T 22-04-2016 RMET_RS11125 2ad040726f79ac1b5f08d54276b46613 206 PANTHER PTHR12918 14 179 7.5E-21 T 22-04-2016 RMET_RS11125 2ad040726f79ac1b5f08d54276b46613 206 SUPERFAMILY SSF51182 12 200 3.62E-58 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS11125 2ad040726f79ac1b5f08d54276b46613 206 Pfam PF05995 Cysteine dioxygenase type I 47 165 1.4E-10 T 22-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 Gene3D G3DSA:3.30.470.20 186 314 8.5E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 Gene3D G3DSA:3.30.470.20 97 115 8.5E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 Pfam PF01820 D-ala D-ala ligase N-terminus 16 98 3.1E-21 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 16 314 3.1E-98 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 75 86 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 Pfam PF07478 D-ala D-ala ligase C-terminus 115 311 4.0E-57 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 PANTHER PTHR23132 16 314 3.8E-93 T 22-04-2016 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 15 315 35.143 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 SUPERFAMILY SSF56059 108 320 3.36E-55 T 22-04-2016 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 SUPERFAMILY SSF52440 16 108 1.06E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 Gene3D G3DSA:3.30.1490.20 119 185 1.4E-18 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS15655 36656625d1b4ad4a95634b4587f16b88 327 Gene3D G3DSA:3.40.50.20 16 96 1.0E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 149 163 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 PANTHER PTHR11079:SF84 20 328 7.0E-118 T 22-04-2016 RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 29 327 5.3E-80 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 SMART SM00363 33 92 4.4E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 SUPERFAMILY SSF55120 100 329 1.54E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 Pfam PF00849 RNA pseudouridylate synthase 111 258 9.9E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 SUPERFAMILY SSF55174 32 83 2.06E-7 T 22-04-2016 RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 Pfam PF01479 S4 domain 33 79 2.9E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS12235 5cddfd7898373c85ba1a7f182c2d18c2 336 PANTHER PTHR11079 20 328 7.0E-118 T 22-04-2016 RMET_RS02290 626159528a8f46a1bc48e37ba62e6f46 331 Pfam PF02562 PhoH-like protein 120 322 8.7E-93 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 RMET_RS02290 626159528a8f46a1bc48e37ba62e6f46 331 PANTHER PTHR30473:SF1 1 330 2.8E-160 T 22-04-2016 RMET_RS02290 626159528a8f46a1bc48e37ba62e6f46 331 PANTHER PTHR30473 1 330 2.8E-160 T 22-04-2016 RMET_RS02290 626159528a8f46a1bc48e37ba62e6f46 331 Gene3D G3DSA:3.40.50.300 119 321 4.7E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02290 626159528a8f46a1bc48e37ba62e6f46 331 SUPERFAMILY SSF52540 118 297 9.19E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08600 d57ba459e126666add7f485192f6069a 326 PANTHER PTHR11695:SF605 16 326 5.8E-119 T 22-04-2016 RMET_RS08600 d57ba459e126666add7f485192f6069a 326 SMART SM00829 11 324 2.0E-31 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS08600 d57ba459e126666add7f485192f6069a 326 Gene3D G3DSA:3.90.180.10 3 149 4.0E-41 T 22-04-2016 IPR011032 GroES-like RMET_RS08600 d57ba459e126666add7f485192f6069a 326 Gene3D G3DSA:3.40.50.720 150 258 4.0E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08600 d57ba459e126666add7f485192f6069a 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 5.0E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RMET_RS08600 d57ba459e126666add7f485192f6069a 326 Pfam PF00107 Zinc-binding dehydrogenase 153 259 1.9E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS08600 d57ba459e126666add7f485192f6069a 326 SUPERFAMILY SSF50129 3 146 4.4E-36 T 22-04-2016 IPR011032 GroES-like RMET_RS08600 d57ba459e126666add7f485192f6069a 326 SUPERFAMILY SSF51735 113 264 1.25E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08600 d57ba459e126666add7f485192f6069a 326 PANTHER PTHR11695 16 326 5.8E-119 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS08600 d57ba459e126666add7f485192f6069a 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 142 163 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RMET_RS01865 40ad974579ee1c9e4ec0fd44896c6f03 144 Pfam PF01230 HIT domain 22 101 1.2E-13 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS01865 40ad974579ee1c9e4ec0fd44896c6f03 144 PANTHER PTHR23089:SF13 22 119 2.2E-20 T 22-04-2016 RMET_RS01865 40ad974579ee1c9e4ec0fd44896c6f03 144 PIRSF PIRSF000714 4 142 4.0E-39 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type RMET_RS01865 40ad974579ee1c9e4ec0fd44896c6f03 144 SUPERFAMILY SSF54197 6 138 5.88E-38 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RMET_RS01865 40ad974579ee1c9e4ec0fd44896c6f03 144 Gene3D G3DSA:3.30.428.10 4 131 7.8E-41 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RMET_RS01865 40ad974579ee1c9e4ec0fd44896c6f03 144 PANTHER PTHR23089 22 119 2.2E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 SUPERFAMILY SSF52172 4 130 2.85E-41 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 PANTHER PTHR26402 7 242 4.7E-86 T 22-04-2016 RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 Pfam PF00072 Response regulator receiver domain 9 119 8.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 SMART SM00448 7 118 1.3E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 PANTHER PTHR26402:SF292 7 242 4.7E-86 T 22-04-2016 RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 SMART SM00862 157 233 6.6E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 Gene3D G3DSA:1.10.10.10 134 236 2.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 Gene3D G3DSA:3.40.50.2300 4 126 1.8E-41 T 22-04-2016 RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 SUPERFAMILY SSF46894 134 235 1.96E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS02605 9bb896cb689fd9e98987d01fdc7d7fd5 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.2E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS11085 b931b9bcd9a2a242bacc26112d1782be 145 Pfam PF00075 RNase H 2 140 2.0E-53 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RMET_RS11085 b931b9bcd9a2a242bacc26112d1782be 145 SUPERFAMILY SSF53098 2 140 4.05E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS11085 b931b9bcd9a2a242bacc26112d1782be 145 Hamap MF_00042 Ribonuclease H [rnhA]. 1 145 34.472 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 RMET_RS11085 b931b9bcd9a2a242bacc26112d1782be 145 Gene3D G3DSA:3.30.420.10 2 141 2.4E-63 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS11085 b931b9bcd9a2a242bacc26112d1782be 145 PANTHER PTHR10642 4 141 2.3E-62 T 22-04-2016 RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 Pfam PF01614 Bacterial transcriptional regulator 141 267 3.1E-10 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 PANTHER PTHR30136 1 282 1.4E-83 T 22-04-2016 RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 Gene3D G3DSA:3.30.450.40 92 272 1.3E-45 T 22-04-2016 IPR029016 GAF domain-like RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 SMART SM00346 22 112 5.8E-20 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 SUPERFAMILY SSF46785 22 95 9.45E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 SUPERFAMILY SSF55781 88 272 1.7E-38 T 22-04-2016 IPR029016 GAF domain-like RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 Pfam PF09339 IclR helix-turn-helix domain 24 74 6.1E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 PANTHER PTHR30136:SF8 1 282 1.4E-83 T 22-04-2016 RMET_RS00425 80e9578a64aeb86b402ce98093872f94 285 Gene3D G3DSA:1.10.10.10 16 91 4.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 PANTHER PTHR33164 9 143 5.5E-24 T 22-04-2016 RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 SUPERFAMILY SSF46785 4 143 4.29E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 Gene3D G3DSA:1.10.10.10 5 143 8.8E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 SMART SM00347 32 132 4.7E-19 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.1E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 1.1E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.1E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.1E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS08055 b6300d24b7b03675d120ffde1f213c7a 145 Pfam PF01047 MarR family 60 97 1.1E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS02390 9fa2527e09ae093fb6832d66fe72bf47 152 Gene3D G3DSA:3.30.700.10 19 142 2.6E-36 T 22-04-2016 RMET_RS02390 9fa2527e09ae093fb6832d66fe72bf47 152 SUPERFAMILY SSF54523 16 138 1.62E-31 T 22-04-2016 RMET_RS02390 9fa2527e09ae093fb6832d66fe72bf47 152 Pfam PF00114 Pilin (bacterial filament) 23 137 1.5E-19 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 Gene3D G3DSA:3.30.565.10 494 663 2.0E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 Gene3D G3DSA:3.30.450.20 112 200 1.7E-4 T 22-04-2016 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 552 660 3.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 Gene3D G3DSA:1.10.287.130 437 493 2.1E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 SMART SM00387 551 663 1.5E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 SUPERFAMILY SSF47384 436 503 2.16E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PANTHER PTHR24423 105 203 4.7E-72 T 22-04-2016 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PANTHER PTHR24423 417 668 4.7E-72 T 22-04-2016 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PANTHER PTHR24423:SF451 105 203 4.7E-72 T 22-04-2016 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PANTHER PTHR24423:SF451 417 668 4.7E-72 T 22-04-2016 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 SUPERFAMILY SSF55874 498 660 6.68E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 606 2.129287E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 620 2.129287E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 641 2.129287E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 660 2.129287E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 PIRSF PIRSF036431 14 668 6.2E-222 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 Pfam PF00512 His Kinase A (phospho-acceptor) domain 440 502 6.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 Pfam PF02743 Cache domain 59 252 3.0E-15 T 22-04-2016 IPR033479 Double Cache domain 1 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 SMART SM00388 440 508 2.2E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS01165 e2211fdc51f9ed6df6122640d03ee55a 668 SUPERFAMILY SSF103190 73 205 6.87E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 4.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 PANTHER PTHR38779 7 130 9.0E-23 T 22-04-2016 RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 Gene3D G3DSA:3.30.1300.30 44 117 2.8E-10 T 22-04-2016 RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 Pfam PF02501 Type II secretion system (T2SS), protein I 47 126 1.4E-22 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 TIGRFAM TIGR01707 gspI: type II secretion system protein I 13 109 1.9E-22 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 PANTHER PTHR38779:SF1 7 130 9.0E-23 T 22-04-2016 RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 Pfam PF13633 Prokaryotic N-terminal methylation site 12 36 1.2E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17010 73d307ff755a961ba602c2c69541c367 134 SUPERFAMILY SSF54523 47 127 1.69E-18 T 22-04-2016 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 PANTHER PTHR11014:SF63 46 423 9.1E-153 T 22-04-2016 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 Gene3D G3DSA:3.30.70.360 220 336 3.3E-43 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 SUPERFAMILY SSF55031 222 335 1.83E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 SUPERFAMILY SSF53187 48 236 1.68E-86 T 22-04-2016 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 SUPERFAMILY SSF53187 337 423 1.68E-86 T 22-04-2016 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 PANTHER PTHR11014 46 423 9.1E-153 T 22-04-2016 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 52 411 1.7E-115 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 Pfam PF07687 Peptidase dimerisation domain 224 322 1.6E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 Pfam PF01546 Peptidase family M20/M25/M40 110 420 3.5E-36 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 PIRSF PIRSF005962 40 425 8.5E-127 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 Gene3D G3DSA:3.40.630.10 337 424 5.1E-99 T 22-04-2016 RMET_RS00120 6a3af66a186d52ab5a4272e1531a760d 425 Gene3D G3DSA:3.40.630.10 47 217 5.1E-99 T 22-04-2016 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 SMART SM00228 219 286 6.3E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 SMART SM00228 111 195 13.0 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 PANTHER PTHR22939:SF78 214 460 1.4E-71 T 22-04-2016 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 Pfam PF02163 Peptidase family M50 6 446 3.9E-74 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 459 2.1E-99 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 SUPERFAMILY SSF50156 228 300 3.94E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 SUPERFAMILY SSF50156 104 200 2.53E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 Gene3D G3DSA:2.30.42.10 100 181 3.4E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 PANTHER PTHR22939 214 460 1.4E-71 T 22-04-2016 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 Gene3D G3DSA:2.30.42.10 216 301 8.3E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS07265 57335f3fd95928f651227a2e7d16e7b8 463 Pfam PF13180 PDZ domain 229 295 2.9E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS10280 29b743d754ac4616c20f96d4ae0daf99 436 PANTHER PTHR30061 11 432 4.1E-151 T 22-04-2016 RMET_RS10280 29b743d754ac4616c20f96d4ae0daf99 436 SUPERFAMILY SSF53850 22 424 5.69E-78 T 22-04-2016 RMET_RS10280 29b743d754ac4616c20f96d4ae0daf99 436 Gene3D G3DSA:3.40.190.10 147 354 5.7E-43 T 22-04-2016 RMET_RS10280 29b743d754ac4616c20f96d4ae0daf99 436 PANTHER PTHR30061:SF7 11 432 4.1E-151 T 22-04-2016 RMET_RS10280 29b743d754ac4616c20f96d4ae0daf99 436 Pfam PF13416 Bacterial extracellular solute-binding protein 44 366 8.5E-43 T 22-04-2016 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 PANTHER PTHR30445:SF2 2 561 3.3E-274 T 22-04-2016 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 PANTHER PTHR30445 2 561 3.3E-274 T 22-04-2016 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 394 543 5.1E-26 T 22-04-2016 IPR006512 YidE/YbjL duplication RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 SUPERFAMILY SSF116726 291 375 6.54E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 Gene3D G3DSA:3.30.70.1450 214 280 4.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 3 559 2.6E-198 T 22-04-2016 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 Pfam PF02080 TrkA-C domain 217 280 1.3E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 Pfam PF02080 TrkA-C domain 310 372 1.8E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 Gene3D G3DSA:3.30.70.1450 309 369 5.9E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 Pfam PF06826 Predicted Permease Membrane Region 15 178 4.8E-36 T 22-04-2016 IPR006512 YidE/YbjL duplication RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 Pfam PF06826 Predicted Permease Membrane Region 389 557 2.3E-43 T 22-04-2016 IPR006512 YidE/YbjL duplication RMET_RS09945 03611922ad639c16ec36c497c3eec685 561 SUPERFAMILY SSF116726 213 282 2.75E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 Gene3D G3DSA:3.30.450.90 170 296 1.8E-48 T 22-04-2016 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 PANTHER PTHR30258 2 568 7.4E-205 T 22-04-2016 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 40 134 9.1E-10 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 Pfam PF00437 Type II/IV secretion system protein 187 463 8.1E-84 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 SUPERFAMILY SSF52540 173 569 3.51E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 PANTHER PTHR30258:SF1 2 568 7.4E-205 T 22-04-2016 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 3 572 7.1E-232 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 391 405 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 SUPERFAMILY SSF160246 2 133 1.75E-23 T 22-04-2016 RMET_RS15565 8d01ab4676be1828ee64ec9c1186ad20 573 Gene3D G3DSA:3.40.50.300 302 571 7.3E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 Gene3D G3DSA:3.40.30.10 2 97 2.5E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 Pfam PF13410 Glutathione S-transferase, C-terminal domain 130 177 5.8E-6 T 22-04-2016 RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 Gene3D G3DSA:1.20.1050.10 98 214 1.9E-54 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 PANTHER PTHR11260:SF289 1 215 1.7E-98 T 22-04-2016 RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 SUPERFAMILY SSF52833 1 106 5.4E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 82 9.0E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 214 2.6E-86 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 SUPERFAMILY SSF47616 84 213 5.68E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS01425 b9a3da01e287f882d3081330055c077d 215 PANTHER PTHR11260 1 215 1.7E-98 T 22-04-2016 RMET_RS08005 d930dc4f37b2c17e2dfa1467b5139429 153 PANTHER PTHR30537:SF29 1 152 8.1E-62 T 22-04-2016 RMET_RS08005 d930dc4f37b2c17e2dfa1467b5139429 153 Gene3D G3DSA:1.10.10.10 3 87 6.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08005 d930dc4f37b2c17e2dfa1467b5139429 153 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08005 d930dc4f37b2c17e2dfa1467b5139429 153 Pfam PF03466 LysR substrate binding domain 88 148 1.5E-10 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS08005 d930dc4f37b2c17e2dfa1467b5139429 153 Gene3D G3DSA:3.40.190.10 94 147 6.7E-12 T 22-04-2016 RMET_RS08005 d930dc4f37b2c17e2dfa1467b5139429 153 SUPERFAMILY SSF46785 2 111 2.52E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08005 d930dc4f37b2c17e2dfa1467b5139429 153 PANTHER PTHR30537 1 152 8.1E-62 T 22-04-2016 RMET_RS08005 d930dc4f37b2c17e2dfa1467b5139429 153 SUPERFAMILY SSF53850 88 150 1.57E-11 T 22-04-2016 RMET_RS25800 bbb1a146d0be1d4af12318f378104a6b 98 SUPERFAMILY SSF51182 24 98 6.88E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS25800 bbb1a146d0be1d4af12318f378104a6b 98 Gene3D G3DSA:2.60.120.10 8 98 6.5E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS25800 bbb1a146d0be1d4af12318f378104a6b 98 Pfam PF07883 Cupin domain 34 97 1.6E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RMET_RS09790 8b53ec68d7ea911da046bc8de7c6181e 168 PANTHER PTHR32125 4 163 9.3E-56 T 22-04-2016 RMET_RS09790 8b53ec68d7ea911da046bc8de7c6181e 168 Gene3D G3DSA:3.30.1330.50 4 161 4.4E-71 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS09790 8b53ec68d7ea911da046bc8de7c6181e 168 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 40 55 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS09790 8b53ec68d7ea911da046bc8de7c6181e 168 SUPERFAMILY SSF69765 6 162 1.31E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS09790 8b53ec68d7ea911da046bc8de7c6181e 168 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 6 161 36.608 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS09790 8b53ec68d7ea911da046bc8de7c6181e 168 Pfam PF02542 YgbB family 6 159 1.1E-64 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS09790 8b53ec68d7ea911da046bc8de7c6181e 168 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 7 160 1.4E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Gene3D G3DSA:2.40.30.10 312 412 1.2E-38 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 700 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Pfam PF03764 Elongation factor G, domain IV 486 606 1.0E-47 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Pfam PF14492 Elongation Factor G, domain II 411 484 5.6E-35 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.8E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.4E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.4E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.4E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.4E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.4E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 111.378 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PANTHER PTHR23115 310 700 0.0 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 SMART SM00889 487 606 8.1E-74 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Gene3D G3DSA:3.40.50.300 6 293 7.5E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Gene3D G3DSA:3.30.70.240 607 694 2.9E-35 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 SMART SM00838 608 696 6.6E-57 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Gene3D G3DSA:3.30.70.870 413 487 4.1E-39 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 SUPERFAMILY SSF52540 6 288 3.7E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 SUPERFAMILY SSF54211 486 607 1.97E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Pfam PF00679 Elongation factor G C-terminus 608 694 3.4E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Gene3D G3DSA:3.30.230.10 491 606 4.1E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 SUPERFAMILY SSF50447 271 409 2.83E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PANTHER PTHR23115:SF66 310 700 0.0 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.5E-64 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 SUPERFAMILY SSF54980 611 698 1.69E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 SUPERFAMILY SSF54980 411 488 2.91E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RMET_RS16675 1653c6388237d43ff808c31585c4a753 703 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.3E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 112 139 2.3E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 2.3E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 90 112 2.3E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 2.3E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 2.3E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 2.3E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 Pfam PF00551 Formyl transferase 90 269 2.0E-36 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 SUPERFAMILY SSF55021 6 86 9.99E-21 T 22-04-2016 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 287 47.809 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 Gene3D G3DSA:3.30.70.260 4 84 5.8E-30 T 22-04-2016 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PANTHER PTHR10520:SF7 1 281 4.0E-146 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 SUPERFAMILY SSF53328 90 288 9.03E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 Pfam PF13740 ACT domain 6 82 5.7E-7 T 22-04-2016 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PIRSF PIRSF036480 3 288 9.9E-108 T 22-04-2016 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 PANTHER PTHR10520 1 281 4.0E-146 T 22-04-2016 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 Gene3D G3DSA:3.40.50.170 88 283 7.4E-55 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS11225 8e3f54beda1bc14df179233be8756c83 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 287 1.1E-100 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RMET_RS09555 8cbbe5ed661ce36dc8c7588feeca68a9 371 Pfam PF13609 Gram-negative porin 22 341 1.5E-39 T 22-04-2016 RMET_RS09555 8cbbe5ed661ce36dc8c7588feeca68a9 371 Gene3D G3DSA:2.40.160.10 30 371 6.7E-68 T 22-04-2016 IPR023614 Porin domain RMET_RS09555 8cbbe5ed661ce36dc8c7588feeca68a9 371 SUPERFAMILY SSF56935 30 371 6.41E-59 T 22-04-2016 RMET_RS09555 8cbbe5ed661ce36dc8c7588feeca68a9 371 PRINTS PR00184 Neisseria sp. porin signature 294 320 1.7E-10 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS09555 8cbbe5ed661ce36dc8c7588feeca68a9 371 PRINTS PR00184 Neisseria sp. porin signature 64 89 1.7E-10 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS09555 8cbbe5ed661ce36dc8c7588feeca68a9 371 PRINTS PR00184 Neisseria sp. porin signature 100 119 1.7E-10 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS09555 8cbbe5ed661ce36dc8c7588feeca68a9 371 PRINTS PR00184 Neisseria sp. porin signature 258 278 1.7E-10 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS17825 7dfdcf9f9f2b7cf73575ed682a99bafe 322 PIRSF PIRSF017082 1 322 7.8E-92 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS17825 7dfdcf9f9f2b7cf73575ed682a99bafe 322 Gene3D G3DSA:3.40.190.10 126 220 1.7E-6 T 22-04-2016 RMET_RS17825 7dfdcf9f9f2b7cf73575ed682a99bafe 322 PANTHER PTHR30349:SF25 1 285 1.1E-87 T 22-04-2016 RMET_RS17825 7dfdcf9f9f2b7cf73575ed682a99bafe 322 SUPERFAMILY SSF53850 92 275 8.79E-11 T 22-04-2016 RMET_RS17825 7dfdcf9f9f2b7cf73575ed682a99bafe 322 PANTHER PTHR30349 1 285 1.1E-87 T 22-04-2016 RMET_RS17825 7dfdcf9f9f2b7cf73575ed682a99bafe 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 68 319 7.5E-36 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 152 1.1E-52 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 1.1E-50 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 Gene3D G3DSA:3.30.420.10 1 154 3.0E-64 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 9.7E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 9.7E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 9.7E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 9.7E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 9.7E-34 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 SUPERFAMILY SSF53098 1 155 3.54E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 PANTHER PTHR30194 1 169 2.1E-63 T 22-04-2016 RMET_RS02150 91ddeacf31e260ca877609ad8985f869 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 46.975 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 PANTHER PTHR11922 1 536 4.0E-274 T 22-04-2016 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 Pfam PF00958 GMP synthase C terminal domain 453 538 2.0E-40 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 2.3E-72 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 Pfam PF00117 Glutamine amidotransferase class-I 7 195 5.2E-34 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 Gene3D G3DSA:3.40.50.880 2 218 5.3E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 Gene3D G3DSA:3.30.300.10 396 539 1.7E-50 T 22-04-2016 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 PANTHER PTHR11922:SF2 1 536 4.0E-274 T 22-04-2016 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 Gene3D G3DSA:3.40.50.620 219 394 5.7E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 SUPERFAMILY SSF52402 192 414 1.52E-58 T 22-04-2016 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 9.2E-5 T 22-04-2016 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 9.2E-5 T 22-04-2016 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 SUPERFAMILY SSF52317 1 232 4.95E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 SUPERFAMILY SSF54810 400 539 1.96E-44 T 22-04-2016 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 539 54.721 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 Pfam PF02540 NAD synthase 211 249 6.3E-7 T 22-04-2016 IPR022310 NAD/GMP synthase RMET_RS07370 9ca9f872345eddbf336102cd9e498c1f 539 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 539 1.2E-140 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RMET_RS03805 3cf8ca70a7019895e284080a56a38365 194 PANTHER PTHR35446:SF2 3 194 2.9E-98 T 22-04-2016 RMET_RS03805 3cf8ca70a7019895e284080a56a38365 194 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 64 96 1.3E-11 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS03805 3cf8ca70a7019895e284080a56a38365 194 Gene3D G3DSA:1.20.5.810 13 64 2.0E-30 T 22-04-2016 RMET_RS03805 3cf8ca70a7019895e284080a56a38365 194 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 6 183 3.2E-72 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related RMET_RS03805 3cf8ca70a7019895e284080a56a38365 194 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 129 4.8E-11 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS03805 3cf8ca70a7019895e284080a56a38365 194 PANTHER PTHR35446 3 194 2.9E-98 T 22-04-2016 RMET_RS03805 3cf8ca70a7019895e284080a56a38365 194 SUPERFAMILY SSF69118 4 191 4.06E-57 T 22-04-2016 IPR029032 AhpD-like RMET_RS03805 3cf8ca70a7019895e284080a56a38365 194 Gene3D G3DSA:1.20.1290.10 65 185 5.7E-36 T 22-04-2016 IPR029032 AhpD-like RMET_RS00320 d09beb4070f7adce46252990b75075af 330 SMART SM00729 93 301 1.9E-15 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS00320 d09beb4070f7adce46252990b75075af 330 Pfam PF04055 Radical SAM superfamily 100 260 7.9E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS00320 d09beb4070f7adce46252990b75075af 330 PANTHER PTHR10949 42 323 9.4E-162 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS00320 d09beb4070f7adce46252990b75075af 330 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 34 82 5.8E-7 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS00320 d09beb4070f7adce46252990b75075af 330 Gene3D G3DSA:3.20.20.70 62 323 7.4E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS00320 d09beb4070f7adce46252990b75075af 330 TIGRFAM TIGR00510 lipA: lipoyl synthase 42 323 6.0E-128 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS00320 d09beb4070f7adce46252990b75075af 330 Hamap MF_00206 Lipoyl synthase [lipA]. 1 330 152.07 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS00320 d09beb4070f7adce46252990b75075af 330 SUPERFAMILY SSF102114 61 327 2.35E-66 T 22-04-2016 RMET_RS00320 d09beb4070f7adce46252990b75075af 330 PIRSF PIRSF005963 3 330 1.0E-127 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS08945 37088424b64467328a2e62a80f73e501 331 Gene3D G3DSA:1.10.620.20 1 328 1.2E-98 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS08945 37088424b64467328a2e62a80f73e501 331 PIRSF PIRSF000040 1 331 8.5E-88 T 22-04-2016 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 RMET_RS08945 37088424b64467328a2e62a80f73e501 331 SUPERFAMILY SSF47240 1 328 7.3E-101 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS08945 37088424b64467328a2e62a80f73e501 331 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 53 273 3.0E-69 T 22-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 Pfam PF00034 Cytochrome c 47 146 8.1E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 PIRSF PIRSF000018 23 421 1.6E-120 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 SUPERFAMILY SSF46626 192 296 1.44E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 Gene3D G3DSA:1.10.760.10 301 417 4.4E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 311 396 2.0E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 SUPERFAMILY SSF46626 43 168 3.86E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 PANTHER PTHR35008 43 417 1.9E-125 T 22-04-2016 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 PANTHER PTHR35008:SF5 43 417 1.9E-125 T 22-04-2016 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 Gene3D G3DSA:1.10.760.10 43 145 5.2E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 Gene3D G3DSA:1.10.760.10 190 291 1.7E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS07140 b1b94e9c01c12475ae4f32a701fe1445 421 SUPERFAMILY SSF46626 299 415 1.13E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS02860 0f9e578d74b7cd227814b5659c7aabd2 80 SUPERFAMILY SSF54928 3 72 6.38E-6 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RMET_RS02860 0f9e578d74b7cd227814b5659c7aabd2 80 Gene3D G3DSA:3.30.70.330 3 73 1.7E-6 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RMET_RS05165 8a3e5858f6800e810b295a2aa64720a0 106 Gene3D G3DSA:2.60.300.12 1 95 4.3E-35 T 22-04-2016 IPR000361 FeS cluster biogenesis RMET_RS05165 8a3e5858f6800e810b295a2aa64720a0 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 9.5E-53 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 RMET_RS05165 8a3e5858f6800e810b295a2aa64720a0 106 PANTHER PTHR10072 1 106 7.2E-52 T 22-04-2016 RMET_RS05165 8a3e5858f6800e810b295a2aa64720a0 106 SUPERFAMILY SSF89360 1 95 1.44E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis RMET_RS05165 8a3e5858f6800e810b295a2aa64720a0 106 PANTHER PTHR10072:SF48 1 106 7.2E-52 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 RMET_RS05165 8a3e5858f6800e810b295a2aa64720a0 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 2.1E-37 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RMET_RS05165 8a3e5858f6800e810b295a2aa64720a0 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RMET_RS05165 8a3e5858f6800e810b295a2aa64720a0 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 4.1E-23 T 22-04-2016 IPR000361 FeS cluster biogenesis RMET_RS04075 ffc25f6734041c3780d5984bb5c1129b 182 SUPERFAMILY SSF52980 2 179 7.24E-70 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RMET_RS04075 ffc25f6734041c3780d5984bb5c1129b 182 PANTHER PTHR38784:SF1 1 182 1.1E-73 T 22-04-2016 RMET_RS04075 ffc25f6734041c3780d5984bb5c1129b 182 PANTHER PTHR38784 1 182 1.1E-73 T 22-04-2016 RMET_RS04075 ffc25f6734041c3780d5984bb5c1129b 182 SMART SM01322 1 176 5.6E-110 T 22-04-2016 IPR009822 YaeQ RMET_RS04075 ffc25f6734041c3780d5984bb5c1129b 182 Gene3D G3DSA:3.10.640.10 1 179 3.6E-79 T 22-04-2016 RMET_RS04075 ffc25f6734041c3780d5984bb5c1129b 182 Pfam PF07152 YaeQ protein 1 173 3.3E-75 T 22-04-2016 IPR009822 YaeQ RMET_RS04075 ffc25f6734041c3780d5984bb5c1129b 182 PIRSF PIRSF011484 1 181 8.8E-71 T 22-04-2016 IPR009822 YaeQ RMET_RS10770 58b5ab1852a50eb26a5adb81049fa487 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 342 6.3E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10770 58b5ab1852a50eb26a5adb81049fa487 349 PANTHER PTHR30465 1 344 2.2E-176 T 22-04-2016 RMET_RS10770 58b5ab1852a50eb26a5adb81049fa487 349 Gene3D G3DSA:1.10.3720.10 116 333 1.3E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10770 58b5ab1852a50eb26a5adb81049fa487 349 PANTHER PTHR30465:SF66 1 344 2.2E-176 T 22-04-2016 RMET_RS10770 58b5ab1852a50eb26a5adb81049fa487 349 SUPERFAMILY SSF161098 115 326 1.02E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 4.4E-78 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 SUPERFAMILY SSF51246 327 420 6.91E-31 T 22-04-2016 IPR011054 Rudiment single hybrid motif RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 6.8E-172 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 PANTHER PTHR10520 1 422 3.1E-265 T 22-04-2016 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 SUPERFAMILY SSF56059 102 324 1.94E-65 T 22-04-2016 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 SUPERFAMILY SSF52440 1 101 3.31E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 SMART SM01210 328 420 8.9E-52 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 Gene3D G3DSA:3.30.470.20 189 326 1.9E-62 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.4E-35 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 Gene3D G3DSA:3.90.600.10 329 420 1.6E-34 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 43.443 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 SMART SM01209 101 294 6.4E-138 T 22-04-2016 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 4.5E-29 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 Gene3D G3DSA:3.30.1490.20 120 188 5.4E-34 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS03935 69ba781a39847fc76b380a5c90e8f93b 422 Gene3D G3DSA:3.40.50.20 2 93 1.9E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 PANTHER PTHR11228 16 236 2.8E-77 T 22-04-2016 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 PANTHER PTHR11228 271 380 2.8E-77 T 22-04-2016 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 Gene3D G3DSA:3.20.20.70 22 361 3.3E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 SUPERFAMILY SSF102114 21 218 3.92E-68 T 22-04-2016 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 SUPERFAMILY SSF102114 253 350 3.92E-68 T 22-04-2016 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 25 377 1.4E-180 T 22-04-2016 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 PIRSF PIRSF037420 18 387 6.0E-128 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 SMART SM00729 26 235 0.0014 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 PANTHER PTHR11228:SF7 16 236 2.8E-77 T 22-04-2016 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 PANTHER PTHR11228:SF7 271 380 2.8E-77 T 22-04-2016 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 Pfam PF04055 Radical SAM superfamily 32 172 1.3E-25 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS15895 a48848735d40d0e19355de2f2e83768d 387 Pfam PF13353 4Fe-4S single cluster domain 28 134 1.7E-12 T 22-04-2016 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 PRINTS PR00974 Ribosomal protein S18 family signature 44 54 2.3E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 PRINTS PR00974 Ribosomal protein S18 family signature 54 61 2.3E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 PRINTS PR00974 Ribosomal protein S18 family signature 62 76 2.3E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 PRINTS PR00974 Ribosomal protein S18 family signature 76 86 2.3E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 TIGRFAM TIGR00165 S18: ribosomal protein bS18 21 88 9.6E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 37 87 2.0E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 SUPERFAMILY SSF46911 15 88 1.11E-26 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 PANTHER PTHR13479 20 88 4.4E-22 T 22-04-2016 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 8 89 19.47 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 Gene3D G3DSA:4.10.640.10 24 90 1.5E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 ProSitePatterns PS00057 Ribosomal protein S18 signature. 37 60 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09910 680c7273e7bac4d95272f784bcb5d0b1 92 Pfam PF01084 Ribosomal protein S18 35 84 5.9E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16345 4058572a9d58d9aed4f0fc5c3bdd504d 283 PANTHER PTHR24220:SF368 20 268 8.2E-131 T 22-04-2016 RMET_RS16345 4058572a9d58d9aed4f0fc5c3bdd504d 283 SMART SM00382 45 242 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS16345 4058572a9d58d9aed4f0fc5c3bdd504d 283 PANTHER PTHR24220 20 268 8.2E-131 T 22-04-2016 RMET_RS16345 4058572a9d58d9aed4f0fc5c3bdd504d 283 Pfam PF00005 ABC transporter 36 185 5.8E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS16345 4058572a9d58d9aed4f0fc5c3bdd504d 283 SUPERFAMILY SSF52540 18 248 6.07E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16345 4058572a9d58d9aed4f0fc5c3bdd504d 283 Gene3D G3DSA:3.40.50.300 18 255 1.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16345 4058572a9d58d9aed4f0fc5c3bdd504d 283 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03150 bb05242fb1b0111df641d27a596afbb1 525 PANTHER PTHR35565:SF1 6 45 0.0 T 22-04-2016 RMET_RS03150 bb05242fb1b0111df641d27a596afbb1 525 PANTHER PTHR35565:SF1 63 516 0.0 T 22-04-2016 RMET_RS03150 bb05242fb1b0111df641d27a596afbb1 525 PANTHER PTHR35565 6 45 0.0 T 22-04-2016 RMET_RS03150 bb05242fb1b0111df641d27a596afbb1 525 PANTHER PTHR35565 63 516 0.0 T 22-04-2016 RMET_RS03150 bb05242fb1b0111df641d27a596afbb1 525 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 48 511 1.9E-206 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RMET_RS03150 bb05242fb1b0111df641d27a596afbb1 525 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 92 511 1.5E-174 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 PANTHER PTHR11938 13 148 1.7E-51 T 22-04-2016 RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 121 132 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 Pfam PF04060 Putative Fe-S cluster 19 51 2.5E-13 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 Gene3D G3DSA:3.30.70.20 54 146 4.7E-16 T 22-04-2016 RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 SUPERFAMILY SSF54862 14 146 1.48E-29 T 22-04-2016 RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 PANTHER PTHR11938:SF64 13 148 1.7E-51 T 22-04-2016 RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 Pfam PF14697 4Fe-4S dicluster domain 84 138 1.5E-17 T 22-04-2016 RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 161 1.1E-68 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 RMET_RS05105 972e58e06b511e90b3366f80bd2eb57e 279 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 SUPERFAMILY SSF54849 137 203 5.72E-24 T 22-04-2016 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 SUPERFAMILY SSF48592 406 521 4.58E-79 T 22-04-2016 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 SUPERFAMILY SSF48592 7 134 4.58E-79 T 22-04-2016 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 Gene3D G3DSA:1.10.560.10 369 518 3.2E-43 T 22-04-2016 IPR027413 GroEL-like equatorial domain RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 Gene3D G3DSA:1.10.560.10 4 188 1.0E-47 T 22-04-2016 IPR027413 GroEL-like equatorial domain RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 PANTHER PTHR11353 2 547 2.4E-255 T 22-04-2016 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 Gene3D G3DSA:3.50.7.10 189 368 5.6E-99 T 22-04-2016 IPR027409 GroEL-like apical domain RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 SUPERFAMILY SSF52029 185 376 2.79E-83 T 22-04-2016 IPR027409 GroEL-like apical domain RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.1E-254 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.5E-98 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RMET_RS03110 047f378d5c420d8a2972e4d3d9a1596c 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.726 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RMET_RS05490 1216ef1244eec697c22193579afe04bf 653 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 641 9.8E-52 T 22-04-2016 IPR000160 GGDEF domain RMET_RS05490 1216ef1244eec697c22193579afe04bf 653 PANTHER PTHR10799 512 638 4.9E-25 T 22-04-2016 RMET_RS05490 1216ef1244eec697c22193579afe04bf 653 Gene3D G3DSA:3.30.450.20 365 466 9.7E-4 T 22-04-2016 RMET_RS05490 1216ef1244eec697c22193579afe04bf 653 Pfam PF00990 Diguanylate cyclase, GGDEF domain 480 638 5.1E-47 T 22-04-2016 IPR000160 GGDEF domain RMET_RS05490 1216ef1244eec697c22193579afe04bf 653 Gene3D G3DSA:3.30.70.270 483 646 4.2E-54 T 22-04-2016 RMET_RS05490 1216ef1244eec697c22193579afe04bf 653 SUPERFAMILY SSF55073 485 642 2.28E-47 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS05490 1216ef1244eec697c22193579afe04bf 653 SMART SM00267 469 642 7.3E-62 T 22-04-2016 IPR000160 GGDEF domain RMET_RS02880 a0f12fd1a7b9aaa96208a54dc234a0d2 238 Gene3D G3DSA:1.10.3720.10 4 214 1.1E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02880 a0f12fd1a7b9aaa96208a54dc234a0d2 238 SUPERFAMILY SSF161098 4 214 2.09E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02880 a0f12fd1a7b9aaa96208a54dc234a0d2 238 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 9 210 4.3E-72 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 RMET_RS02880 a0f12fd1a7b9aaa96208a54dc234a0d2 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 212 1.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02880 a0f12fd1a7b9aaa96208a54dc234a0d2 238 PANTHER PTHR30183 2 215 7.9E-69 T 22-04-2016 RMET_RS10480 8769e5748539a5de983c2b2bd3561a22 144 SUPERFAMILY SSF46785 6 132 5.62E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10480 8769e5748539a5de983c2b2bd3561a22 144 Gene3D G3DSA:1.10.10.10 1 138 4.4E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10480 8769e5748539a5de983c2b2bd3561a22 144 PANTHER PTHR33221 2 143 1.3E-37 T 22-04-2016 RMET_RS10480 8769e5748539a5de983c2b2bd3561a22 144 PANTHER PTHR33221:SF5 2 143 1.3E-37 T 22-04-2016 RMET_RS10480 8769e5748539a5de983c2b2bd3561a22 144 Pfam PF02082 Transcriptional regulator 1 80 8.0E-21 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 Pfam PF13932 GidA associated domain 403 626 2.2E-72 T 22-04-2016 IPR026904 GidA associated domain 3 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 634 42.596 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 22-04-2016 IPR020595 MnmG-related, conserved site RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 22-04-2016 IPR020595 MnmG-related, conserved site RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 632 1.8E-271 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 SMART SM01228 556 627 5.6E-42 T 22-04-2016 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 SUPERFAMILY SSF51905 6 66 4.62E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 SUPERFAMILY SSF51905 97 262 4.62E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 Pfam PF01134 Glucose inhibited division protein A 8 399 3.3E-165 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 Gene3D G3DSA:3.50.50.60 6 233 7.0E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 PANTHER PTHR11806:SF0 1 652 0.0 T 22-04-2016 RMET_RS17615 358eec6bb26e10dcb54cffd6e2a144e6 654 PANTHER PTHR11806 1 652 0.0 T 22-04-2016 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 SUPERFAMILY SSF52540 135 379 2.71E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 SMART SM00448 2 113 2.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 384 5.6E-191 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 499 519 3.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 482 499 3.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 Gene3D G3DSA:1.10.10.60 347 381 3.5E-37 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 Gene3D G3DSA:1.10.10.60 464 518 3.5E-37 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 Gene3D G3DSA:3.40.50.300 134 308 1.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 Gene3D G3DSA:3.40.50.2300 4 129 3.2E-33 T 22-04-2016 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 Pfam PF02954 Bacterial regulatory protein, Fis family 477 516 8.6E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 SUPERFAMILY SSF46689 444 518 2.6E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 Pfam PF00158 Sigma-54 interaction domain 136 302 6.5E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 PANTHER PTHR32071 1 387 6.2E-214 T 22-04-2016 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 PANTHER PTHR32071 433 519 6.2E-214 T 22-04-2016 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 PANTHER PTHR32071:SF15 1 387 6.2E-214 T 22-04-2016 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 PANTHER PTHR32071:SF15 433 519 6.2E-214 T 22-04-2016 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 Pfam PF00072 Response regulator receiver domain 4 113 3.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 SUPERFAMILY SSF52172 2 181 3.56E-40 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS10300 b4eb908c9c18ab8d66594de1244e7acf 519 SMART SM00382 156 303 3.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS04445 1e64e1700fecc7b4db7b7b14a917855f 314 Pfam PF01522 Polysaccharide deacetylase 76 164 3.8E-9 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RMET_RS04445 1e64e1700fecc7b4db7b7b14a917855f 314 PANTHER PTHR10587 11 308 3.4E-153 T 22-04-2016 RMET_RS04445 1e64e1700fecc7b4db7b7b14a917855f 314 PANTHER PTHR10587:SF72 11 308 3.4E-153 T 22-04-2016 RMET_RS04445 1e64e1700fecc7b4db7b7b14a917855f 314 Gene3D G3DSA:3.20.20.370 5 311 1.1E-105 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RMET_RS04445 1e64e1700fecc7b4db7b7b14a917855f 314 SUPERFAMILY SSF88713 5 310 2.97E-89 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RMET_RS04445 1e64e1700fecc7b4db7b7b14a917855f 314 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 310 1.2E-159 T 22-04-2016 IPR017625 Putative urate catabolism protein RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 220 7.4E-6 T 22-04-2016 RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 Gene3D G3DSA:3.40.50.720 2 248 1.2E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 247 1.0E-101 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 SUPERFAMILY SSF51735 6 248 3.82E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PANTHER PTHR24322 12 140 5.3E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PANTHER PTHR24322 156 188 5.3E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 2.0E-68 T 22-04-2016 RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PANTHER PTHR24322:SF635 12 140 5.3E-63 T 22-04-2016 RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PANTHER PTHR24322:SF635 156 188 5.3E-63 T 22-04-2016 RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.8E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.8E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12180 d346103d9850b23dbdf5ac9079f19ee2 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.8E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 SUPERFAMILY SSF51905 2 311 3.19E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 Gene3D G3DSA:3.50.50.60 118 237 1.4E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PANTHER PTHR22912 4 317 7.2E-157 T 22-04-2016 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 313 3.0E-118 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.5E-41 T 22-04-2016 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.5E-41 T 22-04-2016 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.5E-41 T 22-04-2016 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 2.5E-41 T 22-04-2016 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.5E-41 T 22-04-2016 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 300 1.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PANTHER PTHR22912:SF48 4 317 7.2E-157 T 22-04-2016 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 Gene3D G3DSA:3.50.50.60 3 117 6.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 Gene3D G3DSA:3.50.50.60 238 314 1.1E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03450 f0c91f5f276f81e25668730a297f6aae 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 Gene3D G3DSA:1.10.8.260 282 330 1.7E-7 T 22-04-2016 IPR023166 HI0933 insert-like domain RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 SUPERFAMILY SSF51905 345 404 9.36E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 SUPERFAMILY SSF51905 8 193 9.36E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 Gene3D G3DSA:2.40.30.10 193 281 2.4E-25 T 22-04-2016 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 Gene3D G3DSA:3.50.50.60 7 191 7.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 Gene3D G3DSA:3.50.50.60 347 404 7.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 11 399 5.9E-115 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 Pfam PF03486 HI0933-like protein 9 400 2.4E-136 T 22-04-2016 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 PANTHER PTHR10617:SF103 1 296 9.0E-105 T 22-04-2016 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 PANTHER PTHR10617:SF103 338 407 9.0E-105 T 22-04-2016 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 SUPERFAMILY SSF160996 194 348 9.16E-39 T 22-04-2016 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 1.6E-5 T 22-04-2016 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.6E-5 T 22-04-2016 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 PANTHER PTHR10617 1 296 9.0E-105 T 22-04-2016 RMET_RS13125 dc4a6076560395918d3cfd06a133be18 413 PANTHER PTHR10617 338 407 9.0E-105 T 22-04-2016 RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 PANTHER PTHR11071 5 166 5.1E-71 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 SUPERFAMILY SSF50891 4 164 1.27E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 PANTHER PTHR11071:SF192 5 166 5.1E-71 T 22-04-2016 RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 Gene3D G3DSA:2.40.100.10 3 165 1.6E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 4.0E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 4.0E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 4.0E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 163 5.0E-47 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RMET_RS05440 002dd89bc7b8eef209298ea6c038f6ee 166 PIRSF PIRSF001467 1 166 1.2E-26 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 SUPERFAMILY SSF109736 172 228 1.44E-19 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1348 21.066 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 SUPERFAMILY SSF82697 4 160 1.1E-42 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 SUPERFAMILY SSF56042 454 681 4.64E-49 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 PANTHER PTHR10099 3 362 0.0 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 PANTHER PTHR10099 380 941 0.0 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 PANTHER PTHR10099 967 1348 0.0 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1092 1347 9.2E-101 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 8 1347 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 SUPERFAMILY SSF56042 853 1085 7.92E-50 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 Gene3D G3DSA:3.40.50.880 1093 1312 1.4E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 Gene3D G3DSA:3.30.1330.10 219 443 9.7E-38 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 Gene3D G3DSA:3.30.1330.10 672 837 4.0E-14 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 SUPERFAMILY SSF55326 229 451 1.26E-57 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 SMART SM01211 1092 1347 7.5E-144 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 PANTHER PTHR10099:SF5 3 362 0.0 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 PANTHER PTHR10099:SF5 380 941 0.0 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 PANTHER PTHR10099:SF5 967 1348 0.0 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 Pfam PF02769 AIR synthase related protein, C-terminal domain 865 1010 1.1E-12 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 Pfam PF02769 AIR synthase related protein, C-terminal domain 454 611 8.9E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 SUPERFAMILY SSF55326 646 843 4.97E-67 T 22-04-2016 RMET_RS09365 2c460a84898d20c48fc6529f5bc0f7a1 1348 SUPERFAMILY SSF52317 1089 1347 7.92E-89 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS24060 19acddf533b12df9255122db46318666 98 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1 97 3.9E-22 T 22-04-2016 IPR000014 PAS domain RMET_RS24060 19acddf533b12df9255122db46318666 98 Gene3D G3DSA:3.30.450.20 1 89 4.8E-18 T 22-04-2016 RMET_RS24060 19acddf533b12df9255122db46318666 98 SUPERFAMILY SSF55785 1 97 2.26E-20 T 22-04-2016 IPR000014 PAS domain RMET_RS24060 19acddf533b12df9255122db46318666 98 SMART SM00086 48 90 1.8E-4 T 22-04-2016 IPR001610 PAC motif RMET_RS24060 19acddf533b12df9255122db46318666 98 Pfam PF00989 PAS fold 1 87 4.6E-12 T 22-04-2016 IPR013767 PAS fold GO:0006355 RMET_RS05800 f5b53a952f15ab21681ae070649b069b 232 SUPERFAMILY SSF100950 2 227 1.62E-90 T 22-04-2016 RMET_RS05800 f5b53a952f15ab21681ae070649b069b 232 Gene3D G3DSA:3.40.1080.10 2 215 5.5E-104 T 22-04-2016 RMET_RS05800 f5b53a952f15ab21681ae070649b069b 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 5.8E-83 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RMET_RS05800 f5b53a952f15ab21681ae070649b069b 232 Pfam PF01144 Coenzyme A transferase 6 217 3.8E-82 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS05800 f5b53a952f15ab21681ae070649b069b 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RMET_RS05800 f5b53a952f15ab21681ae070649b069b 232 SMART SM00882 5 217 5.2E-95 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS05800 f5b53a952f15ab21681ae070649b069b 232 PANTHER PTHR13707 1 231 1.7E-144 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 SMART SM00382 179 322 0.22 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 SMART SM00382 1 170 6.4 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 436 1.6E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 436 1.2E-169 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.5E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 SUPERFAMILY SSF52540 138 443 3.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 PANTHER PTHR11649 1 439 2.3E-142 T 22-04-2016 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 PIRSF PIRSF006485 1 444 8.4E-169 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 SUPERFAMILY SSF52540 4 165 1.26E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 Pfam PF01926 50S ribosome-binding GTPase 182 300 1.5E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 Pfam PF01926 50S ribosome-binding GTPase 5 120 2.5E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 Hamap MF_00195 GTPase Der [der]. 2 439 37.619 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 PANTHER PTHR11649:SF5 1 439 2.3E-142 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 180 341 2.7E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 4.2E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 Gene3D G3DSA:3.30.300.20 362 438 6.3E-25 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 Gene3D G3DSA:3.40.50.300 3 170 6.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10525 1b6c4be3bff16a66edf9b64b5ca80e60 447 Gene3D G3DSA:3.40.50.300 179 361 3.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 PANTHER PTHR24096 7 616 3.3E-213 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 Pfam PF00501 AMP-binding enzyme 16 477 1.0E-82 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 PANTHER PTHR24096:SF151 7 616 3.3E-213 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 Gene3D G3DSA:2.30.38.10 412 471 4.9E-15 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 Gene3D G3DSA:3.40.50.980 344 401 2.2E-25 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 Gene3D G3DSA:3.40.50.980 199 290 2.2E-25 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 Gene3D G3DSA:3.40.50.980 7 132 6.3E-29 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 Gene3D G3DSA:3.40.50.980 165 198 6.3E-29 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 SUPERFAMILY SSF56801 347 608 2.22E-104 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 SUPERFAMILY SSF56801 7 295 2.22E-104 T 22-04-2016 RMET_RS01090 42ec4dcda15fb89fb9728bc2088d81cd 654 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS10765 b118ba5171f59f634038e2df85021311 376 PANTHER PTHR30325 14 357 1.3E-153 T 22-04-2016 RMET_RS10765 b118ba5171f59f634038e2df85021311 376 Gene3D G3DSA:1.10.3720.10 144 349 6.6E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10765 b118ba5171f59f634038e2df85021311 376 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 171 352 1.5E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10765 b118ba5171f59f634038e2df85021311 376 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 55 6.1E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RMET_RS10765 b118ba5171f59f634038e2df85021311 376 SUPERFAMILY SSF161098 148 335 5.63E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 PANTHER PTHR11879 1 398 5.7E-238 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 PANTHER PTHR11879:SF11 1 398 5.7E-238 T 22-04-2016 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 1.7E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 1.7E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 1.7E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 1.7E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 Gene3D G3DSA:3.40.640.10 48 317 5.7E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 SUPERFAMILY SSF53383 1 397 3.64E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RMET_RS05120 848c2536efba63082dddee0f44f09e19 398 Pfam PF00155 Aminotransferase class I and II 29 394 1.9E-81 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 Gene3D G3DSA:1.20.1250.20 500 526 2.9E-19 T 22-04-2016 RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 Gene3D G3DSA:1.20.1250.20 42 218 8.4E-29 T 22-04-2016 RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 Gene3D G3DSA:1.20.1250.20 291 448 2.9E-19 T 22-04-2016 RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 Pfam PF07690 Major Facilitator Superfamily 44 437 6.7E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 PANTHER PTHR23501 29 528 2.7E-229 T 22-04-2016 RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 PANTHER PTHR23501:SF52 29 528 2.7E-229 T 22-04-2016 RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 40 520 8.0E-157 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 SUPERFAMILY SSF103473 23 221 3.79E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 SUPERFAMILY SSF103473 499 524 3.79E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS10150 39f5fef6da4c853d16fbb7776b0a2a73 537 SUPERFAMILY SSF103473 276 447 3.79E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 SUPERFAMILY SSF48403 8 195 6.36E-51 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 SMART SM00248 69 98 2.3E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 SMART SM00248 135 169 0.93 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 SMART SM00248 36 65 0.041 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 SMART SM00248 102 131 0.076 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 SMART SM00248 3 32 600.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 PANTHER PTHR24198 8 196 1.8E-50 T 22-04-2016 RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 Pfam PF12796 Ankyrin repeats (3 copies) 8 67 2.6E-7 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 Pfam PF12796 Ankyrin repeats (3 copies) 76 171 1.7E-14 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 Gene3D G3DSA:1.25.40.20 66 193 1.9E-36 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS13240 7644992d76cf5e8a6a83cdbeda6401be 199 Gene3D G3DSA:1.25.40.20 8 65 9.7E-17 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PANTHER PTHR11405 9 322 2.2E-126 T 22-04-2016 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 Gene3D G3DSA:3.40.50.1370 163 298 4.0E-51 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 SUPERFAMILY SSF53671 16 321 4.71E-97 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 16 321 41.592 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 Gene3D G3DSA:3.40.50.1370 17 162 3.2E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 8.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 8.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 151 162 8.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 8.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 315 2.6E-25 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 17 318 8.2E-94 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PANTHER PTHR11405:SF16 9 322 2.2E-126 T 22-04-2016 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 17 163 7.1E-38 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 150 167 3.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 3.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 3.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 3.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 3.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS13750 51e016bb4da8cfbe52e18b0285c388a5 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 3.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RMET_RS11405 e809c3eae1768ca1232e08fc371f00eb 297 PANTHER PTHR12715:SF11 1 282 1.2E-54 T 22-04-2016 RMET_RS11405 e809c3eae1768ca1232e08fc371f00eb 297 SUPERFAMILY SSF103481 190 285 1.16E-15 T 22-04-2016 RMET_RS11405 e809c3eae1768ca1232e08fc371f00eb 297 Pfam PF00892 EamA-like transporter family 145 281 2.6E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS11405 e809c3eae1768ca1232e08fc371f00eb 297 Pfam PF00892 EamA-like transporter family 5 124 5.3E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS11405 e809c3eae1768ca1232e08fc371f00eb 297 SUPERFAMILY SSF103481 26 128 9.15E-18 T 22-04-2016 RMET_RS11405 e809c3eae1768ca1232e08fc371f00eb 297 PANTHER PTHR12715 1 282 1.2E-54 T 22-04-2016 RMET_RS13050 d85e49468046a14ce9ca8ca57260ab11 367 Pfam PF02515 CoA-transferase family III 24 362 4.5E-89 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS13050 d85e49468046a14ce9ca8ca57260ab11 367 Gene3D G3DSA:3.30.1540.10 247 318 1.6E-14 T 22-04-2016 RMET_RS13050 d85e49468046a14ce9ca8ca57260ab11 367 PANTHER PTHR24023:SF577 85 357 5.4E-35 T 22-04-2016 RMET_RS13050 d85e49468046a14ce9ca8ca57260ab11 367 PANTHER PTHR24023 85 357 5.4E-35 T 22-04-2016 RMET_RS13050 d85e49468046a14ce9ca8ca57260ab11 367 SUPERFAMILY SSF89796 22 364 1.7E-97 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS13050 d85e49468046a14ce9ca8ca57260ab11 367 Gene3D G3DSA:3.40.50.10540 319 364 1.1E-80 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS13050 d85e49468046a14ce9ca8ca57260ab11 367 Gene3D G3DSA:3.40.50.10540 21 229 1.1E-80 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 SMART SM00448 10 123 3.7E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 Gene3D G3DSA:1.10.287.130 138 199 4.8E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 270 367 3.4E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 367 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 348 1.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 SMART SM00387 261 370 3.5E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 SUPERFAMILY SSF47384 131 214 2.94E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 SUPERFAMILY SSF55874 228 368 3.93E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 PANTHER PTHR24423 114 367 3.0E-26 T 22-04-2016 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 SUPERFAMILY SSF52172 9 150 3.98E-24 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 Gene3D G3DSA:3.40.50.2300 11 137 5.1E-24 T 22-04-2016 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 Gene3D G3DSA:3.30.565.10 200 369 2.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 212 2.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 Pfam PF00072 Response regulator receiver domain 12 123 2.6E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14790 79cc81149780afc9bb048bd9f4ddc3db 378 SMART SM00388 142 214 4.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08390 3a1d797cc0c8bfdf6bd408a2195485c9 442 Pfam PF13163 Protein of unknown function (DUF3999) 20 427 6.7E-117 T 22-04-2016 IPR025060 Protein of unknown function DUF3999 RMET_RS07345 f7ba5ecfbbafab35137ea1aafacb01f3 121 Pfam PF03658 RnfH family Ubiquitin 15 96 3.6E-28 T 22-04-2016 IPR005346 RnfH protein RMET_RS07345 f7ba5ecfbbafab35137ea1aafacb01f3 121 SUPERFAMILY SSF54285 14 87 1.05E-21 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RMET_RS07345 f7ba5ecfbbafab35137ea1aafacb01f3 121 Hamap MF_00460 Protein RnfH [rnfH]. 14 104 23.075 T 22-04-2016 IPR005346 RnfH protein RMET_RS07345 f7ba5ecfbbafab35137ea1aafacb01f3 121 PANTHER PTHR37483:SF1 11 116 2.9E-25 T 22-04-2016 RMET_RS07345 f7ba5ecfbbafab35137ea1aafacb01f3 121 PANTHER PTHR37483 11 116 2.9E-25 T 22-04-2016 RMET_RS07345 f7ba5ecfbbafab35137ea1aafacb01f3 121 Gene3D G3DSA:3.10.20.280 14 98 8.7E-30 T 22-04-2016 IPR005346 RnfH protein RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 PANTHER PTHR11941 2 186 6.2E-112 T 22-04-2016 RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 PANTHER PTHR11941 250 327 6.2E-112 T 22-04-2016 RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 SUPERFAMILY SSF52096 3 186 9.36E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 SUPERFAMILY SSF52096 254 348 9.36E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 PANTHER PTHR11941:SF53 2 186 6.2E-112 T 22-04-2016 RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 PANTHER PTHR11941:SF53 250 327 6.2E-112 T 22-04-2016 RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 Pfam PF16113 Enoyl-CoA hydratase/isomerase 14 344 3.0E-126 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 Gene3D G3DSA:3.90.226.10 3 196 1.3E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS10120 7b43fcd6febe79e6000c2470f1e8f0e6 360 Gene3D G3DSA:1.10.12.10 270 317 4.4E-7 T 22-04-2016 IPR014748 Crontonase, C-terminal RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 SUPERFAMILY SSF55781 20 167 1.2E-12 T 22-04-2016 IPR029016 GAF domain-like RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 Pfam PF00158 Sigma-54 interaction domain 189 355 9.5E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 Gene3D G3DSA:3.30.450.40 20 165 2.3E-10 T 22-04-2016 IPR029016 GAF domain-like RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 SMART SM00065 15 164 4.7E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 213 226 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 275 290 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 Gene3D G3DSA:1.10.8.60 362 409 1.9E-18 T 22-04-2016 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 SMART SM00382 209 352 3.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 Pfam PF02954 Bacterial regulatory protein, Fis family 472 502 4.8E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 PANTHER PTHR32071:SF35 188 521 2.1E-157 T 22-04-2016 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 Gene3D G3DSA:3.40.50.300 187 361 5.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 PANTHER PTHR32071 188 521 2.1E-157 T 22-04-2016 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 491 511 1.74E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 474 491 1.74E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 Gene3D G3DSA:1.10.10.60 410 510 6.5E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 402 411 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 SUPERFAMILY SSF52540 188 430 1.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15875 9ec87097a4cf1d9cec64ca653acdc1cd 525 SUPERFAMILY SSF46689 459 510 2.46E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08570 e86f7bc62b30294a7969b758c1608b49 519 Gene3D G3DSA:1.20.1600.10 58 472 5.5E-100 T 22-04-2016 RMET_RS08570 e86f7bc62b30294a7969b758c1608b49 519 PANTHER PTHR30203:SF3 12 492 1.7E-104 T 22-04-2016 RMET_RS08570 e86f7bc62b30294a7969b758c1608b49 519 SUPERFAMILY SSF56954 8 472 9.55E-99 T 22-04-2016 RMET_RS08570 e86f7bc62b30294a7969b758c1608b49 519 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 470 6.2E-90 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS08570 e86f7bc62b30294a7969b758c1608b49 519 PANTHER PTHR30203 12 492 1.7E-104 T 22-04-2016 RMET_RS08570 e86f7bc62b30294a7969b758c1608b49 519 Pfam PF02321 Outer membrane efflux protein 68 257 3.1E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS08570 e86f7bc62b30294a7969b758c1608b49 519 Pfam PF02321 Outer membrane efflux protein 284 468 5.7E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 Pfam PF05199 GMC oxidoreductase 444 572 1.3E-23 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 Gene3D G3DSA:3.50.50.60 5 158 5.9E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 Gene3D G3DSA:3.50.50.60 454 467 5.9E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 Gene3D G3DSA:3.50.50.60 512 580 5.9E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 Gene3D G3DSA:3.50.50.60 243 349 5.9E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 PANTHER PTHR11552:SF139 4 583 2.1E-134 T 22-04-2016 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 Pfam PF00732 GMC oxidoreductase 202 344 3.9E-13 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 SUPERFAMILY SSF51905 521 582 5.18E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 SUPERFAMILY SSF51905 5 341 5.18E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 SUPERFAMILY SSF54373 432 492 3.84E-7 T 22-04-2016 RMET_RS12550 9c2b94e01cab4e561194964540c290c6 591 PANTHER PTHR11552 4 583 2.1E-134 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 875 894 2.8E-23 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 526 540 2.8E-23 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 822 832 2.8E-23 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 691 2.8E-23 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 899 911 2.8E-23 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 115 177 2.62E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 460 480 8.4E-16 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 542 558 8.4E-16 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 561 575 8.4E-16 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 218 227 8.4E-16 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 406 418 8.4E-16 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PANTHER PTHR24093 214 973 2.1E-267 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 214 278 2.62E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PANTHER PTHR24093:SF317 214 973 2.1E-267 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 42 107 1.17E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81665 577 668 8.37E-13 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81665 424 479 8.37E-13 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 425 978 4.1E-180 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:2.70.150.10 425 577 3.5E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 44 109 3.0E-8 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 448 959 1.3E-79 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00702 haloacid dehalogenase-like hydrolase 674 889 6.6E-42 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.40.1110.10 691 802 8.4E-22 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00122 E1-E2 ATPase 446 668 9.5E-66 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.40.50.1000 803 944 2.4E-44 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.40.50.1000 650 690 2.4E-44 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81653 478 576 2.88E-23 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 407 978 4.4E-121 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 284 354 1.44E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF56784 676 695 6.34E-54 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF56784 733 975 6.34E-54 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 116 178 2.5E-8 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 215 278 2.4E-7 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 286 351 7.4E-10 T 22-04-2016 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 679 685 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 217 268 1.2E-4 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 117 162 1.4E-6 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 288 344 1.3E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11560 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 46 93 2.0E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 28 183 1.7E-66 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 Hamap MF_00105 Transcription elongation factor GreA [greA]. 28 181 27.042 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 SUPERFAMILY SSF54534 108 182 9.55E-20 T 22-04-2016 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 Gene3D G3DSA:1.10.287.180 29 101 7.2E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 PANTHER PTHR30437 1 184 8.5E-58 T 22-04-2016 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 PANTHER PTHR30437:SF6 1 184 8.5E-58 T 22-04-2016 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 146 162 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 43 74 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 Pfam PF03449 Transcription elongation factor, N-terminal 30 100 4.9E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 109 182 1.9E-23 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 Hamap MF_00930 Transcription elongation factor GreB [greB]. 27 183 50.498 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 Gene3D G3DSA:3.10.50.30 106 184 2.8E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 PIRSF PIRSF006092 26 184 1.5E-42 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RMET_RS04315 254c755643e0899f821c55403cf21d45 186 SUPERFAMILY SSF46557 29 104 1.31E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RMET_RS11170 a4bf7a51ffe69bbc179b39a3a363ba89 202 PANTHER PTHR11080 1 200 8.5E-54 T 22-04-2016 RMET_RS11170 a4bf7a51ffe69bbc179b39a3a363ba89 202 SUPERFAMILY SSF52499 5 199 7.06E-47 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS11170 a4bf7a51ffe69bbc179b39a3a363ba89 202 Pfam PF00857 Isochorismatase family 27 196 8.5E-35 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS11170 a4bf7a51ffe69bbc179b39a3a363ba89 202 Gene3D G3DSA:3.40.50.850 6 196 1.1E-48 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS11170 a4bf7a51ffe69bbc179b39a3a363ba89 202 PANTHER PTHR11080:SF17 1 200 8.5E-54 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 42 738 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 424 662 5.8E-40 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 108 388 9.0E-30 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 SUPERFAMILY SSF56784 494 620 2.82E-36 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 SUPERFAMILY SSF56784 339 363 2.82E-36 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 SUPERFAMILY SSF56784 426 468 2.82E-36 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PANTHER PTHR24093:SF49 42 648 0.0 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PANTHER PTHR24093:SF49 686 739 0.0 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 SUPERFAMILY SSF81665 62 139 5.62E-13 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 SUPERFAMILY SSF81665 248 345 5.62E-13 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 SUPERFAMILY SSF81665 675 723 5.62E-13 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PANTHER PTHR24093 42 648 0.0 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PANTHER PTHR24093 686 739 0.0 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 194 208 1.3E-23 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 596 1.3E-23 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 534 1.3E-23 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 351 365 1.3E-23 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 612 1.3E-23 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 Gene3D G3DSA:3.40.50.1000 504 624 1.2E-34 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 Pfam PF00122 E1-E2 ATPase 108 342 7.1E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 Pfam PF00702 haloacid dehalogenase-like hydrolase 347 591 2.0E-33 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 Gene3D G3DSA:2.70.150.10 102 248 9.0E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 42 741 40.947 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 SUPERFAMILY SSF81653 155 247 1.01E-19 T 22-04-2016 RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 353 359 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RMET_RS00210 1a1940433db1036e67302cdb7682be47 743 Gene3D G3DSA:3.40.1110.10 362 503 6.5E-44 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RMET_RS14615 a162864d5cb90492ecae50484620d495 213 SUPERFAMILY SSF52540 3 203 5.02E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14615 a162864d5cb90492ecae50484620d495 213 PANTHER PTHR10513:SF16 8 201 5.8E-30 T 22-04-2016 RMET_RS14615 a162864d5cb90492ecae50484620d495 213 PANTHER PTHR10513 8 201 5.8E-30 T 22-04-2016 RMET_RS14615 a162864d5cb90492ecae50484620d495 213 Gene3D G3DSA:3.40.50.300 6 200 9.0E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14615 a162864d5cb90492ecae50484620d495 213 PIRSF PIRSF000705 2 207 1.2E-46 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 RMET_RS14615 a162864d5cb90492ecae50484620d495 213 Pfam PF01712 Deoxynucleoside kinase 8 200 1.3E-30 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain RMET_RS03310 49940aa988c2e77d9645d202b2b1ac14 338 PANTHER PTHR10859:SF81 1 338 2.6E-145 T 22-04-2016 RMET_RS03310 49940aa988c2e77d9645d202b2b1ac14 338 PANTHER PTHR10859 1 338 2.6E-145 T 22-04-2016 RMET_RS03310 49940aa988c2e77d9645d202b2b1ac14 338 Pfam PF00535 Glycosyl transferase family 2 11 172 4.6E-30 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RMET_RS03310 49940aa988c2e77d9645d202b2b1ac14 338 SUPERFAMILY SSF53448 9 243 6.28E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS03310 49940aa988c2e77d9645d202b2b1ac14 338 Gene3D G3DSA:3.90.550.10 9 146 2.0E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 Gene3D G3DSA:3.40.50.1950 2 185 4.5E-65 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 SUPERFAMILY SSF52507 3 181 4.71E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 390 5.6E-126 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 366 2.6E-65 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 PANTHER PTHR14359 1 398 4.1E-165 T 22-04-2016 RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 PANTHER PTHR14359:SF20 1 398 4.1E-165 T 22-04-2016 RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 SUPERFAMILY SSF102645 183 394 7.32E-71 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 Pfam PF02441 Flavoprotein 6 133 1.6E-35 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RMET_RS14470 64f2e302e0aba69b16171c4757d3679d 399 Gene3D G3DSA:3.40.50.10300 186 395 1.9E-81 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RMET_RS03055 f10730d737e00910f767724cb339df24 407 SUPERFAMILY SSF54427 273 390 1.96E-15 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS03055 f10730d737e00910f767724cb339df24 407 PANTHER PTHR11614 1 279 1.2E-22 T 22-04-2016 RMET_RS03055 f10730d737e00910f767724cb339df24 407 PANTHER PTHR11614:SF89 1 279 1.2E-22 T 22-04-2016 RMET_RS03055 f10730d737e00910f767724cb339df24 407 Pfam PF12697 Alpha/beta hydrolase family 12 247 2.0E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS03055 f10730d737e00910f767724cb339df24 407 Pfam PF12680 SnoaL-like domain 282 387 5.5E-7 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RMET_RS03055 f10730d737e00910f767724cb339df24 407 Gene3D G3DSA:3.40.50.1820 9 254 1.2E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS03055 f10730d737e00910f767724cb339df24 407 SUPERFAMILY SSF53474 10 254 1.51E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS03055 f10730d737e00910f767724cb339df24 407 Gene3D G3DSA:3.10.450.50 277 389 1.7E-12 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 Gene3D G3DSA:3.30.360.10 126 289 1.1E-38 T 22-04-2016 RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 SUPERFAMILY SSF51735 6 137 7.25E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 PANTHER PTHR32338 1 306 8.9E-104 T 22-04-2016 RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 SUPERFAMILY SSF55347 117 289 3.01E-36 T 22-04-2016 RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 41 104 6.4E-12 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 PANTHER PTHR32338:SF9 1 306 8.9E-104 T 22-04-2016 RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 306 1.0E-119 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 SMART SM00859 5 106 1.4E-17 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 308 50.906 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS08855 3d23d909c69ff213c3145b4cebb005ed 309 Gene3D G3DSA:3.40.50.720 36 125 8.1E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 Pfam PF00072 Response regulator receiver domain 3 111 6.8E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 SUPERFAMILY SSF52172 1 173 1.87E-40 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 Gene3D G3DSA:1.10.10.10 122 221 5.1E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 PANTHER PTHR26402:SF575 1 220 2.5E-105 T 22-04-2016 RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 SMART SM00448 1 111 1.6E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 8.3E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 1.1E-103 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 PANTHER PTHR26402 1 220 2.5E-105 T 22-04-2016 RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 SMART SM00862 144 219 8.6E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS08770 6d9d76e2b21ebb2d5159b7a8686811c0 224 Gene3D G3DSA:3.40.50.2300 1 120 2.4E-39 T 22-04-2016 RMET_RS04885 36c4c512716c68861e6ae891328748af 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 328 2.0E-67 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04885 36c4c512716c68861e6ae891328748af 333 PANTHER PTHR30349:SF1 23 294 1.0E-67 T 22-04-2016 RMET_RS04885 36c4c512716c68861e6ae891328748af 333 PIRSF PIRSF017082 1 331 1.4E-67 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04885 36c4c512716c68861e6ae891328748af 333 PANTHER PTHR30349 23 294 1.0E-67 T 22-04-2016 RMET_RS04885 36c4c512716c68861e6ae891328748af 333 SUPERFAMILY SSF53850 120 292 1.95E-8 T 22-04-2016 RMET_RS14760 9e90a5ed4d168a39609b3314fa543c2b 376 SUPERFAMILY SSF51713 1 370 3.53E-157 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS14760 9e90a5ed4d168a39609b3314fa543c2b 376 PANTHER PTHR21148:SF26 1 373 9.4E-171 T 22-04-2016 RMET_RS14760 9e90a5ed4d168a39609b3314fa543c2b 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 370 8.4E-165 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS14760 9e90a5ed4d168a39609b3314fa543c2b 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 365 56.632 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS14760 9e90a5ed4d168a39609b3314fa543c2b 376 PANTHER PTHR21148 1 373 9.4E-171 T 22-04-2016 RMET_RS14760 9e90a5ed4d168a39609b3314fa543c2b 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 367 5.3E-92 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS14760 9e90a5ed4d168a39609b3314fa543c2b 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 370 3.2E-157 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS14760 9e90a5ed4d168a39609b3314fa543c2b 376 Gene3D G3DSA:3.20.20.105 1 371 8.9E-166 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 Pfam PF00691 OmpA family 64 158 2.9E-20 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 PANTHER PTHR30128 19 167 2.3E-50 T 22-04-2016 RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 Gene3D G3DSA:3.30.1330.60 51 165 3.2E-35 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 147 167 8.7E-11 T 22-04-2016 RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 109 126 8.7E-11 T 22-04-2016 RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 127 146 8.7E-11 T 22-04-2016 RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 SUPERFAMILY SSF103088 50 164 1.24E-35 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 PANTHER PTHR30128:SF12 19 167 2.3E-50 T 22-04-2016 RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 PRINTS PR01021 OMPA domain signature 109 125 2.1E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 PRINTS PR01021 OMPA domain signature 64 86 2.1E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS11275 12db0afb59558ccdcbebdc353b7236c8 167 PRINTS PR01021 OMPA domain signature 94 109 2.1E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS09020 7001df415d5e2df513b1c82b89466cf4 343 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 64 338 2.1E-64 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS09020 7001df415d5e2df513b1c82b89466cf4 343 SUPERFAMILY SSF53850 127 308 4.78E-9 T 22-04-2016 RMET_RS09020 7001df415d5e2df513b1c82b89466cf4 343 PIRSF PIRSF017082 10 343 4.2E-64 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS09020 7001df415d5e2df513b1c82b89466cf4 343 PANTHER PTHR30349:SF1 40 305 7.4E-62 T 22-04-2016 RMET_RS09020 7001df415d5e2df513b1c82b89466cf4 343 PANTHER PTHR30349 40 305 7.4E-62 T 22-04-2016 RMET_RS12955 c78897937d37063bab646adf5555e0dd 326 Pfam PF03186 CobD/Cbib protein 28 255 1.8E-25 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RMET_RS12955 c78897937d37063bab646adf5555e0dd 326 PANTHER PTHR38684 2 261 1.2E-29 T 22-04-2016 RMET_RS12955 c78897937d37063bab646adf5555e0dd 326 PANTHER PTHR38684 297 326 1.2E-29 T 22-04-2016 RMET_RS12955 c78897937d37063bab646adf5555e0dd 326 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 326 61.697 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 248 2.7E-63 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 PANTHER PTHR21198 2 263 3.4E-83 T 22-04-2016 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 SUPERFAMILY SSF53681 108 260 6.05E-32 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 214 2.7E-36 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 PANTHER PTHR21198:SF2 2 263 3.4E-83 T 22-04-2016 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 Hamap MF_00258 Glutamate racemase [murI]. 4 255 35.034 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 Gene3D G3DSA:3.40.50.1860 3 172 4.0E-50 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS11420 e572eecfb1ffaa299b727921585cb919 270 SUPERFAMILY SSF53681 5 106 2.29E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 461 9.2E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 Pfam PF04273 Putative phosphatase (DUF442) 3 110 4.6E-34 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 SUPERFAMILY SSF52799 7 108 1.5E-5 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 Gene3D G3DSA:3.90.190.10 1 137 2.3E-49 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 2 133 8.7E-38 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 PANTHER PTHR10632 100 547 2.8E-180 T 22-04-2016 RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 Gene3D G3DSA:3.50.50.60 150 263 4.5E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 Gene3D G3DSA:3.50.50.60 406 474 4.5E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 SUPERFAMILY SSF51905 345 471 2.31E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 SUPERFAMILY SSF51905 149 248 2.31E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11910 035ace2bee6774282b567a3756d7c439 556 PANTHER PTHR10632:SF2 100 547 2.8E-180 T 22-04-2016 RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 SUPERFAMILY SSF51735 6 272 4.38E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 8.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 8.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 5.2E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.2E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.2E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 5.2E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 5.2E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 Gene3D G3DSA:3.40.50.720 2 272 5.0E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PANTHER PTHR24322:SF328 11 195 8.1E-39 T 22-04-2016 RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 272 1.9E-44 T 22-04-2016 RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 PANTHER PTHR24322 11 195 8.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS12665 a667d4ec964b9aa5b257bb987cfb54a5 277 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 0.0035 T 22-04-2016 RMET_RS11915 eeae01590c0cd8b36c4c88a14c124a24 518 Gene3D G3DSA:1.20.210.10 80 514 7.1E-35 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS11915 eeae01590c0cd8b36c4c88a14c124a24 518 SUPERFAMILY SSF81442 77 515 6.93E-85 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS11915 eeae01590c0cd8b36c4c88a14c124a24 518 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 80 492 1.0E-73 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS11915 eeae01590c0cd8b36c4c88a14c124a24 518 PANTHER PTHR10422:SF21 52 507 1.6E-31 T 22-04-2016 RMET_RS11915 eeae01590c0cd8b36c4c88a14c124a24 518 PANTHER PTHR10422 52 507 1.6E-31 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 SUPERFAMILY SSF55120 130 373 5.14E-75 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 Pfam PF00849 RNA pseudouridylate synthase 144 298 1.1E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 SMART SM00363 69 134 6.6E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 PANTHER PTHR11079:SF73 58 312 2.2E-124 T 22-04-2016 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 PANTHER PTHR11079:SF73 330 379 2.2E-124 T 22-04-2016 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 186 200 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 Gene3D G3DSA:3.10.290.10 69 118 9.8E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 SUPERFAMILY SSF55174 69 119 3.92E-10 T 22-04-2016 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 66 368 2.1E-92 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 PANTHER PTHR11079 58 312 2.2E-124 T 22-04-2016 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 PANTHER PTHR11079 330 379 2.2E-124 T 22-04-2016 RMET_RS06820 31899a0e508d61913080fd3aea74072e 403 Pfam PF01479 S4 domain 69 111 7.7E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 PANTHER PTHR11573 19 832 3.8E-198 T 22-04-2016 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 22 583 5.2E-176 T 22-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 16 82 1.8E-5 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 Pfam PF02867 Ribonucleotide reductase, barrel domain 89 580 2.5E-137 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 SUPERFAMILY SSF51998 448 610 1.56E-176 T 22-04-2016 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 SUPERFAMILY SSF51998 255 413 1.56E-176 T 22-04-2016 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 SUPERFAMILY SSF51998 10 211 1.56E-176 T 22-04-2016 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 Gene3D G3DSA:3.20.70.20 448 495 9.8E-128 T 22-04-2016 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 Gene3D G3DSA:3.20.70.20 255 413 9.8E-128 T 22-04-2016 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 Gene3D G3DSA:3.20.70.20 17 211 9.8E-128 T 22-04-2016 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 Gene3D G3DSA:3.20.70.20 539 583 9.8E-128 T 22-04-2016 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 289 300 7.0E-28 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 393 416 7.0E-28 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 365 387 7.0E-28 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 448 475 7.0E-28 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 170 189 7.0E-28 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 327 350 7.0E-28 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10665 0d3d7a39260925cc34f807ab6ee11609 832 PANTHER PTHR11573:SF3 19 832 3.8E-198 T 22-04-2016 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 ProSitePatterns PS00480 Citrate synthase signature. 267 279 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 Gene3D G3DSA:1.10.580.10 23 246 6.9E-76 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 SUPERFAMILY SSF48256 18 384 1.96E-122 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 17 384 2.6E-155 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PANTHER PTHR11739 18 384 1.6E-151 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PRINTS PR00143 Citrate synthase signature 207 235 1.5E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PRINTS PR00143 Citrate synthase signature 317 333 1.5E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PRINTS PR00143 Citrate synthase signature 260 280 1.5E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PRINTS PR00143 Citrate synthase signature 185 200 1.5E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PRINTS PR00143 Citrate synthase signature 337 351 1.5E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PRINTS PR00143 Citrate synthase signature 135 148 1.5E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 Gene3D G3DSA:1.10.230.10 247 331 1.0E-27 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 Pfam PF00285 Citrate synthase, C-terminal domain 18 367 7.8E-113 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PIRSF PIRSF001369 11 385 8.1E-111 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RMET_RS07980 e319d8dc52226df78043ef5be9f238c0 385 PANTHER PTHR11739:SF4 18 384 1.6E-151 T 22-04-2016 RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 PANTHER PTHR13767 10 312 1.5E-121 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 39 188 4.2E-59 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 18 226 1.5E-80 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 SUPERFAMILY SSF55120 17 252 3.45E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 189 246 1.6E-15 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 250 312 1.6E-15 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 Gene3D G3DSA:2.30.130.10 250 313 3.1E-9 T 22-04-2016 IPR015947 PUA-like domain RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 PANTHER PTHR13767:SF2 10 312 1.5E-121 T 22-04-2016 RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 17 312 19.692 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS10155 649f352df32789d3f001c7b6d1d3b0c3 314 SUPERFAMILY SSF88697 249 313 6.46E-8 T 22-04-2016 IPR015947 PUA-like domain RMET_RS03945 2c121437351c70c2d2caa6f52d0f7298 511 SUPERFAMILY SSF52540 4 368 4.37E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03945 2c121437351c70c2d2caa6f52d0f7298 511 PANTHER PTHR30121:SF3 18 438 1.9E-168 T 22-04-2016 RMET_RS03945 2c121437351c70c2d2caa6f52d0f7298 511 PANTHER PTHR30121 18 438 1.9E-168 T 22-04-2016 RMET_RS03945 2c121437351c70c2d2caa6f52d0f7298 511 Gene3D G3DSA:3.40.50.300 4 108 5.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03945 2c121437351c70c2d2caa6f52d0f7298 511 Gene3D G3DSA:3.40.50.300 204 379 5.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03945 2c121437351c70c2d2caa6f52d0f7298 511 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 510 1.9E-240 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 SMART SM00833 267 355 6.3E-8 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 Gene3D G3DSA:3.40.50.300 3 203 6.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 PANTHER PTHR13748:SF43 3 211 1.5E-123 T 22-04-2016 RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 PANTHER PTHR13748:SF43 243 355 1.5E-123 T 22-04-2016 RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 PANTHER PTHR13748 3 211 1.5E-123 T 22-04-2016 RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 PANTHER PTHR13748 243 355 1.5E-123 T 22-04-2016 RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 Gene3D G3DSA:3.30.1220.10 247 354 5.7E-31 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 184 2.2E-55 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 267 353 7.3E-19 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 SUPERFAMILY SSF52540 3 204 2.95E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS31510 9561559c40d27c0c2d06bc792cfd822d 355 SUPERFAMILY SSF90002 267 354 5.1E-23 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 50 69 3.3E-18 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 98 118 3.3E-18 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 498 519 3.3E-18 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 438 460 3.3E-18 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 284 306 3.3E-18 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 72 96 3.3E-18 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 Pfam PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus 490 586 3.9E-6 T 22-04-2016 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal KEGG: 00624+1.6.5.- RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PANTHER PTHR22773:SF50 1 637 2.2E-258 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 684 2.5E-243 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PANTHER PTHR22773 1 637 2.2E-258 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 439 458 1.5E-67 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 124 144 1.5E-67 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 96 121 1.5E-67 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 334 346 1.5E-67 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 266 292 1.5E-67 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 171 192 1.5E-67 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 265 1.5E-67 T 22-04-2016 RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 78 135 3.3E-26 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RMET_RS04720 5658a5552c26d9976ac81f292cbea25f 692 Pfam PF00361 Proton-conducting membrane transporter 147 429 2.0E-84 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RMET_RS16640 f0349e8777d4543cbbe26c4b43e54918 170 SUPERFAMILY SSF50475 16 167 1.08E-43 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS16640 f0349e8777d4543cbbe26c4b43e54918 170 Pfam PF01613 Flavin reductase like domain 25 168 3.9E-31 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RMET_RS16640 f0349e8777d4543cbbe26c4b43e54918 170 SMART SM00903 24 167 3.6E-51 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RMET_RS16640 f0349e8777d4543cbbe26c4b43e54918 170 PANTHER PTHR30466 16 170 2.9E-32 T 22-04-2016 RMET_RS16640 f0349e8777d4543cbbe26c4b43e54918 170 Gene3D G3DSA:2.30.110.10 14 165 1.9E-48 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS07460 4c2f4a330458099dfdee5c4462662801 97 PANTHER PTHR10245 1 84 3.1E-16 T 22-04-2016 RMET_RS07460 4c2f4a330458099dfdee5c4462662801 97 Pfam PF01381 Helix-turn-helix 29 82 2.6E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS07460 4c2f4a330458099dfdee5c4462662801 97 SMART SM00530 28 83 1.0E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS07460 4c2f4a330458099dfdee5c4462662801 97 PANTHER PTHR10245:SF41 1 84 3.1E-16 T 22-04-2016 RMET_RS07460 4c2f4a330458099dfdee5c4462662801 97 SUPERFAMILY SSF47413 22 88 7.51E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS07460 4c2f4a330458099dfdee5c4462662801 97 Gene3D G3DSA:1.10.260.40 18 90 8.5E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 242 35.754 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 242 1.1E-81 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 151 165 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 PANTHER PTHR10108 4 243 8.8E-135 T 22-04-2016 RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 SUPERFAMILY SSF53335 1 233 1.09E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 PANTHER PTHR10108:SF864 4 243 8.8E-135 T 22-04-2016 RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 242 5.1E-75 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RMET_RS01880 1449a59ccb31cb7df95fa88b4a9e7a3d 243 Gene3D G3DSA:3.40.50.150 19 236 4.3E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 4.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PRINTS PR00986 Valyl-tRNA synthetase signature 357 370 4.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PRINTS PR00986 Valyl-tRNA synthetase signature 241 258 4.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PRINTS PR00986 Valyl-tRNA synthetase signature 470 491 4.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PRINTS PR00986 Valyl-tRNA synthetase signature 501 519 4.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 SUPERFAMILY SSF47323 637 903 7.66E-63 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 889 953 7.8E-20 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Pfam PF08264 Anticodon-binding domain of tRNA 677 830 4.3E-42 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 954 15.496 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PANTHER PTHR11946:SF5 885 948 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PANTHER PTHR11946:SF5 1 565 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PANTHER PTHR11946:SF5 603 863 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Gene3D G3DSA:1.10.730.10 626 823 2.4E-63 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Gene3D G3DSA:3.40.50.620 604 625 3.0E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Gene3D G3DSA:3.40.50.620 352 566 3.0E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Gene3D G3DSA:3.40.50.620 10 199 3.0E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PANTHER PTHR11946 885 948 0.0 T 22-04-2016 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PANTHER PTHR11946 1 565 0.0 T 22-04-2016 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 PANTHER PTHR11946 603 863 0.0 T 22-04-2016 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 SUPERFAMILY SSF46589 889 953 1.1E-16 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 SUPERFAMILY SSF52374 8 198 3.34E-131 T 22-04-2016 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 SUPERFAMILY SSF52374 604 636 3.34E-131 T 22-04-2016 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 SUPERFAMILY SSF52374 352 566 3.34E-131 T 22-04-2016 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 SUPERFAMILY SSF50677 198 353 2.09E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Gene3D G3DSA:1.10.287.380 887 953 1.1E-4 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 24 626 6.1E-201 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 935 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RMET_RS13220 99a38b9d96c5274710dd393466eeeb11 955 Gene3D G3DSA:3.90.740.10 200 348 9.3E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 SUPERFAMILY SSF52172 3 126 5.98E-43 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 SMART SM00862 152 229 1.1E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 Gene3D G3DSA:3.40.50.2300 3 125 4.0E-41 T 22-04-2016 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 PANTHER PTHR26402 3 231 7.8E-112 T 22-04-2016 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 229 1.4E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 Gene3D G3DSA:1.10.10.10 129 230 2.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 PANTHER PTHR26402:SF576 3 231 7.8E-112 T 22-04-2016 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 229 2.2E-104 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 SMART SM00448 3 116 2.2E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 SUPERFAMILY SSF46894 124 230 1.22E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS10945 d2ff7ce1ebefe5269f6282718556a4fe 235 Pfam PF00072 Response regulator receiver domain 5 117 3.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 SUPERFAMILY SSF55594 1 87 9.29E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.4E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 PANTHER PTHR33705 1 89 6.9E-39 T 22-04-2016 RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 9.7E-32 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 PANTHER PTHR33705:SF2 1 89 6.9E-39 T 22-04-2016 RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 Gene3D G3DSA:3.30.1340.10 1 87 2.7E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.2E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.2E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RMET_RS01245 36fb6186547c1d1a8e7471feb7f7ee04 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.2E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 ProSitePatterns PS00145 Urease active site. 318 334 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 572 1.2E-294 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 SUPERFAMILY SSF51338 427 482 2.59E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 Pfam PF01979 Amidohydrolase family 126 459 1.3E-80 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 Hamap MF_01953 Urease subunit alpha [ureC]. 3 572 57.231 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 3.9E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 3.9E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 3.9E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 3.9E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 Gene3D G3DSA:3.20.20.140 493 570 6.3E-213 T 22-04-2016 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 Gene3D G3DSA:3.20.20.140 145 434 6.3E-213 T 22-04-2016 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 Gene3D G3DSA:2.30.40.10 69 144 5.1E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 PANTHER PTHR22642 321 506 4.4E-259 T 22-04-2016 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 PANTHER PTHR22642 20 297 4.4E-259 T 22-04-2016 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 SUPERFAMILY SSF51338 3 178 1.64E-64 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 PANTHER PTHR22642:SF7 321 506 4.4E-259 T 22-04-2016 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 PANTHER PTHR22642:SF7 20 297 4.4E-259 T 22-04-2016 RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 SUPERFAMILY SSF51556 130 437 2.26E-198 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 SUPERFAMILY SSF51556 486 572 2.26E-198 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS04835 2ee017e86d8e31f377643101f6b5a715 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 120 5.5E-57 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04725 725403094562eda140ce4497b725ad24 488 PANTHER PTHR22773 1 483 3.9E-208 T 22-04-2016 RMET_RS04725 725403094562eda140ce4497b725ad24 488 Pfam PF00361 Proton-conducting membrane transporter 130 413 1.7E-80 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RMET_RS04725 725403094562eda140ce4497b725ad24 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 2.8E-50 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RMET_RS04725 725403094562eda140ce4497b725ad24 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 2.8E-50 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RMET_RS04725 725403094562eda140ce4497b725ad24 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 2.8E-50 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RMET_RS04725 725403094562eda140ce4497b725ad24 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 2.8E-50 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RMET_RS04725 725403094562eda140ce4497b725ad24 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 2.8E-50 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RMET_RS04725 725403094562eda140ce4497b725ad24 488 PANTHER PTHR22773:SF40 1 483 3.9E-208 T 22-04-2016 RMET_RS04725 725403094562eda140ce4497b725ad24 488 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 482 7.1E-188 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 SUPERFAMILY SSF53474 14 263 8.17E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 4.8E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 4.8E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 4.8E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 4.8E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 Pfam PF00561 alpha/beta hydrolase fold 26 249 2.0E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 Gene3D G3DSA:3.40.50.1820 15 264 1.6E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 PANTHER PTHR10992:SF771 13 264 4.3E-34 T 22-04-2016 RMET_RS07880 f7c96ff4fd74f33b3618ac0ed0cc4888 277 PANTHER PTHR10992 13 264 4.3E-34 T 22-04-2016 RMET_RS08225 80f14bff3268f4882681ae116f1cc597 326 Gene3D G3DSA:3.40.190.10 128 227 1.3E-5 T 22-04-2016 RMET_RS08225 80f14bff3268f4882681ae116f1cc597 326 PIRSF PIRSF017082 1 325 3.0E-89 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08225 80f14bff3268f4882681ae116f1cc597 326 PANTHER PTHR30349 4 294 1.9E-101 T 22-04-2016 RMET_RS08225 80f14bff3268f4882681ae116f1cc597 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 322 1.8E-94 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08225 80f14bff3268f4882681ae116f1cc597 326 SUPERFAMILY SSF53850 113 284 2.92E-16 T 22-04-2016 RMET_RS08225 80f14bff3268f4882681ae116f1cc597 326 PANTHER PTHR30349:SF16 4 294 1.9E-101 T 22-04-2016 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 SMART SM00481 7 74 6.1E-22 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1038 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 Gene3D G3DSA:3.20.20.140 6 263 3.8E-17 T 22-04-2016 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 Pfam PF14579 Helix-hairpin-helix motif 811 900 2.7E-29 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 299 738 3.7E-175 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 Gene3D G3DSA:1.10.150.280 838 884 8.4E-4 T 22-04-2016 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 Gene3D G3DSA:2.40.50.140 1002 1080 4.1E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 Pfam PF02811 PHP domain 8 180 1.6E-38 T 22-04-2016 IPR004013 PHP domain GO:0003824 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 PANTHER PTHR32294 2 1167 0.0 T 22-04-2016 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 PANTHER PTHR32294:SF0 2 1167 0.0 T 22-04-2016 RMET_RS03785 c0fcfa859135019e55edccfd153a5046 1167 SUPERFAMILY SSF89550 6 270 1.08E-8 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RMET_RS17280 22b70df2f78ad2c75cf21abd083f2485 149 Gene3D G3DSA:3.40.630.30 7 147 2.9E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS17280 22b70df2f78ad2c75cf21abd083f2485 149 PANTHER PTHR10545:SF33 64 137 1.7E-15 T 22-04-2016 RMET_RS17280 22b70df2f78ad2c75cf21abd083f2485 149 SUPERFAMILY SSF55729 16 139 1.89E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS17280 22b70df2f78ad2c75cf21abd083f2485 149 PANTHER PTHR10545 64 137 1.7E-15 T 22-04-2016 RMET_RS17280 22b70df2f78ad2c75cf21abd083f2485 149 Pfam PF00583 Acetyltransferase (GNAT) family 58 136 6.9E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 412 5.8E-205 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 Gene3D G3DSA:1.10.8.60 317 418 2.5E-36 T 22-04-2016 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 SMART SM00994 12 51 8.7E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 PANTHER PTHR11262:SF4 3 422 1.1E-244 T 22-04-2016 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 416 53.314 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 SMART SM00382 114 334 2.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 PANTHER PTHR11262 3 422 1.1E-244 T 22-04-2016 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 311 3.8E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 SMART SM01086 318 413 4.7E-33 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 Gene3D G3DSA:3.40.50.300 295 312 5.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 Gene3D G3DSA:3.40.50.300 68 256 5.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 389 2.7E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 SUPERFAMILY SSF57716 13 48 1.01E-11 T 22-04-2016 RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 SUPERFAMILY SSF52540 65 401 1.07E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09445 0dc01d4d6cc53b2d733eb0ef3a3b31c4 425 Pfam PF06689 ClpX C4-type zinc finger 13 49 3.4E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 SMART SM00342 243 326 1.4E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 Gene3D G3DSA:1.10.10.60 280 329 2.5E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 Pfam PF01965 DJ-1/PfpI family 9 188 8.4E-23 T 22-04-2016 IPR002818 DJ-1/PfpI RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 PANTHER PTHR11019:SF58 84 334 1.6E-81 T 22-04-2016 RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 SUPERFAMILY SSF52317 9 208 2.55E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 Pfam PF12833 Helix-turn-helix domain 249 327 2.0E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 Gene3D G3DSA:3.40.50.880 11 232 1.5E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 SUPERFAMILY SSF46689 279 330 4.03E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 PANTHER PTHR11019 84 334 1.6E-81 T 22-04-2016 RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 SUPERFAMILY SSF46689 227 276 2.15E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS17410 1759901315fc2f7a74a33486e3c266da 341 Gene3D G3DSA:1.10.10.60 233 279 5.6E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 SMART SM00662 20 230 4.9E-95 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 306 7.2E-25 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 SUPERFAMILY SSF56553 50 174 7.59E-42 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 314 1.8E-107 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 315 35.367 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 5.0E-35 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 SUPERFAMILY SSF55257 175 228 5.4E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 SUPERFAMILY SSF55257 5 50 5.4E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 6.3E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 Gene3D G3DSA:3.30.1360.10 5 63 1.0E-10 T 22-04-2016 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 PANTHER PTHR32108:SF0 6 326 4.0E-141 T 22-04-2016 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 Gene3D G3DSA:2.170.120.12 64 173 3.5E-42 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 SUPERFAMILY SSF47789 249 322 4.58E-27 T 22-04-2016 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 2.0E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 Gene3D G3DSA:1.10.150.20 245 322 1.6E-36 T 22-04-2016 RMET_RS16505 e6957463b1da984a7a63e74375af0e0b 326 PANTHER PTHR32108 6 326 4.0E-141 T 22-04-2016 RMET_RS11920 b94aa56fcb6b024eee30655bf61751c8 213 SUPERFAMILY SSF46626 90 186 5.64E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11920 b94aa56fcb6b024eee30655bf61751c8 213 SUPERFAMILY SSF46626 5 63 5.64E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11920 b94aa56fcb6b024eee30655bf61751c8 213 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 147 1.1E-29 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RMET_RS11920 b94aa56fcb6b024eee30655bf61751c8 213 PANTHER PTHR10422:SF23 38 143 5.1E-18 T 22-04-2016 RMET_RS11920 b94aa56fcb6b024eee30655bf61751c8 213 PANTHER PTHR10422 38 143 5.1E-18 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS11920 b94aa56fcb6b024eee30655bf61751c8 213 Gene3D G3DSA:1.10.760.10 32 185 5.2E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS04910 2f7b619b0975dbf980c98f3271e69c9d 389 SUPERFAMILY SSF53383 14 388 1.26E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS04910 2f7b619b0975dbf980c98f3271e69c9d 389 Pfam PF00155 Aminotransferase class I and II 35 386 3.8E-61 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS04910 2f7b619b0975dbf980c98f3271e69c9d 389 Gene3D G3DSA:3.40.640.10 49 277 9.1E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS04910 2f7b619b0975dbf980c98f3271e69c9d 389 PANTHER PTHR11751:SF301 15 389 1.9E-133 T 22-04-2016 RMET_RS04910 2f7b619b0975dbf980c98f3271e69c9d 389 PANTHER PTHR11751 15 389 1.9E-133 T 22-04-2016 RMET_RS04910 2f7b619b0975dbf980c98f3271e69c9d 389 Gene3D G3DSA:3.90.1150.10 278 388 2.3E-15 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 SUPERFAMILY SSF101904 540 872 1.23E-107 T 22-04-2016 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Gene3D G3DSA:3.90.199.10 34 216 9.4E-87 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 2.5E-155 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Gene3D G3DSA:2.120.10.90 538 862 8.8E-134 T 22-04-2016 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Gene3D G3DSA:3.30.1360.40 236 333 2.6E-40 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RMET_RS03585 7be52c927e058de255114a37c87fa519 897 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 863 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 SUPERFAMILY SSF56719 30 528 1.7E-180 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 SMART SM00434 11 506 1.2E-289 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 PANTHER PTHR10169 457 832 0.0 T 22-04-2016 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 PANTHER PTHR10169 2 417 0.0 T 22-04-2016 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 PANTHER PTHR10169:SF48 457 832 0.0 T 22-04-2016 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 PANTHER PTHR10169:SF48 2 417 0.0 T 22-04-2016 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 866 29.579 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Gene3D G3DSA:1.10.268.10 363 504 7.4E-47 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 766 813 8.5E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 700 745 6.5E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 545 592 2.2E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 816 859 4.5E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 695 7.8E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS03585 7be52c927e058de255114a37c87fa519 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 595 641 1.2E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 SMART SM00382 165 308 4.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 SUPERFAMILY SSF52172 3 189 7.83E-42 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 SUPERFAMILY SSF52540 145 374 6.81E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 Gene3D G3DSA:3.40.50.2300 2 129 1.1E-33 T 22-04-2016 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 Gene3D G3DSA:1.10.10.60 367 441 8.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 Gene3D G3DSA:3.40.50.300 144 317 3.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 441 1.3E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 1.3E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 SUPERFAMILY SSF46689 388 441 6.09E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 PANTHER PTHR32071 5 441 1.6E-212 T 22-04-2016 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 Pfam PF00158 Sigma-54 interaction domain 145 311 3.9E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 Pfam PF00072 Response regulator receiver domain 7 116 4.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 SMART SM00448 5 116 3.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 Gene3D G3DSA:1.10.8.60 318 366 7.6E-19 T 22-04-2016 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 PANTHER PTHR32071:SF11 5 441 1.6E-212 T 22-04-2016 RMET_RS01170 5e5bef30aa3558c3f63977683b11dc85 441 Pfam PF02954 Bacterial regulatory protein, Fis family 400 439 5.3E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS14785 ca791b44fb6c519492808003b8f23e83 332 SMART SM00448 11 124 7.5E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14785 ca791b44fb6c519492808003b8f23e83 332 Pfam PF00072 Response regulator receiver domain 13 122 5.8E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14785 ca791b44fb6c519492808003b8f23e83 332 SUPERFAMILY SSF52172 11 154 1.2E-21 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS14785 ca791b44fb6c519492808003b8f23e83 332 Gene3D G3DSA:3.40.50.2300 12 140 2.1E-20 T 22-04-2016 RMET_RS14785 ca791b44fb6c519492808003b8f23e83 332 PANTHER PTHR26402:SF509 11 142 2.4E-17 T 22-04-2016 RMET_RS14785 ca791b44fb6c519492808003b8f23e83 332 PANTHER PTHR26402:SF509 196 210 2.4E-17 T 22-04-2016 RMET_RS14785 ca791b44fb6c519492808003b8f23e83 332 PANTHER PTHR26402 11 142 2.4E-17 T 22-04-2016 RMET_RS14785 ca791b44fb6c519492808003b8f23e83 332 PANTHER PTHR26402 196 210 2.4E-17 T 22-04-2016 RMET_RS11485 da14ef3eb119495394a04d637302f52d 166 Pfam PF03713 Domain of unknown function (DUF305) 111 161 3.4E-11 T 22-04-2016 IPR005183 Domain of unknown function DUF305 RMET_RS11485 da14ef3eb119495394a04d637302f52d 166 Gene3D G3DSA:1.20.1260.10 59 164 1.5E-21 T 22-04-2016 IPR012347 Ferritin-related RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 PANTHER PTHR31689:SF0 1 287 3.8E-127 T 22-04-2016 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 281 9.7E-90 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 Gene3D G3DSA:3.10.310.10 1 120 3.3E-55 T 22-04-2016 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 PANTHER PTHR31689 1 287 3.8E-127 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 Gene3D G3DSA:3.10.310.10 121 271 4.2E-51 T 22-04-2016 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 Pfam PF01678 Diaminopimelate epimerase 162 275 7.5E-31 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 Pfam PF01678 Diaminopimelate epimerase 5 125 6.7E-35 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 SUPERFAMILY SSF54506 3 283 9.74E-54 T 22-04-2016 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS00780 bd9a2bd674738e686725b637d062ac10 288 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 283 39.235 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14290 e0fdfab46506ec4b83fc5c6e1f6fb0ba 271 Pfam PF05013 N-formylglutamate amidohydrolase 18 237 2.0E-67 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase RMET_RS14290 e0fdfab46506ec4b83fc5c6e1f6fb0ba 271 Gene3D G3DSA:3.40.630.40 4 269 2.5E-89 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RMET_RS14290 e0fdfab46506ec4b83fc5c6e1f6fb0ba 271 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 10 268 6.2E-107 T 22-04-2016 IPR010247 N-formylglutamate deformylase RMET_RS14290 e0fdfab46506ec4b83fc5c6e1f6fb0ba 271 SUPERFAMILY SSF53187 9 267 4.39E-79 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 Gene3D G3DSA:3.40.228.10 188 399 8.7E-52 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 PIRSF PIRSF000144 1 768 0.0 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 PANTHER PTHR11615:SF114 276 767 1.3E-252 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 PANTHER PTHR11615:SF114 54 257 1.3E-252 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 Pfam PF00384 Molybdopterin oxidoreductase 114 499 1.1E-20 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 SUPERFAMILY SSF53706 52 634 6.02E-142 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 SUPERFAMILY SSF50692 651 767 1.02E-15 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 18 766 1.6E-281 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 PANTHER PTHR11615 276 767 1.3E-252 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 PANTHER PTHR11615 54 257 1.3E-252 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 Gene3D G3DSA:2.40.40.20 649 767 9.7E-9 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 Pfam PF01568 Molydopterin dinucleotide binding domain 654 760 5.1E-9 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 Gene3D G3DSA:3.40.50.740 114 187 1.2E-53 T 22-04-2016 RMET_RS05655 12e14a6d431d03d336b98c6b0b38d11a 768 Gene3D G3DSA:3.40.50.740 400 630 1.2E-53 T 22-04-2016 RMET_RS14430 01494ff07b876a43db8f949893f0304e 220 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 2.0E-74 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RMET_RS14430 01494ff07b876a43db8f949893f0304e 220 PANTHER PTHR10520 1 194 2.3E-104 T 22-04-2016 RMET_RS14430 01494ff07b876a43db8f949893f0304e 220 Pfam PF00551 Formyl transferase 2 182 8.6E-62 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS14430 01494ff07b876a43db8f949893f0304e 220 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 32.382 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RMET_RS14430 01494ff07b876a43db8f949893f0304e 220 Gene3D G3DSA:3.40.50.170 1 194 2.3E-73 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS14430 01494ff07b876a43db8f949893f0304e 220 SUPERFAMILY SSF53328 2 194 5.49E-68 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS02695 7c07259d70a4eac768bde0ef77754942 269 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 4 261 41.735 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RMET_RS02695 7c07259d70a4eac768bde0ef77754942 269 SUPERFAMILY SSF53448 6 265 3.29E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS02695 7c07259d70a4eac768bde0ef77754942 269 Gene3D G3DSA:3.90.550.10 6 260 1.7E-79 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS02695 7c07259d70a4eac768bde0ef77754942 269 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 5 254 1.3E-86 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RMET_RS02695 7c07259d70a4eac768bde0ef77754942 269 Pfam PF02348 Cytidylyltransferase 8 234 2.0E-54 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RMET_RS02695 7c07259d70a4eac768bde0ef77754942 269 PANTHER PTHR21485:SF4 6 260 3.4E-105 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RMET_RS02695 7c07259d70a4eac768bde0ef77754942 269 PANTHER PTHR21485 6 260 3.4E-105 T 22-04-2016 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 SUPERFAMILY SSF46785 15 87 1.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 SMART SM00866 104 241 4.2E-38 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 PANTHER PTHR11751 15 90 2.0E-33 T 22-04-2016 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 PANTHER PTHR11751 128 146 2.0E-33 T 22-04-2016 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 1.8E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 1.8E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 PANTHER PTHR11751:SF364 15 90 2.0E-33 T 22-04-2016 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 PANTHER PTHR11751:SF364 128 146 2.0E-33 T 22-04-2016 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 SUPERFAMILY SSF64288 71 247 1.1E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 Gene3D G3DSA:3.40.1410.10 101 237 8.1E-51 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 SMART SM00345 24 83 1.7E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 7.6E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 Pfam PF07702 UTRA domain 105 241 2.3E-37 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 246 3.6E-90 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 RMET_RS14320 9d4f740692773d45361d10024dee3f33 255 Gene3D G3DSA:1.10.10.10 16 91 2.8E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 SUPERFAMILY SSF52821 2 142 1.24E-40 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 SMART SM00450 8 134 3.3E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 SMART SM00450 159 279 2.1E-8 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 PANTHER PTHR11364:SF0 1 284 1.9E-86 T 22-04-2016 RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 ProSitePatterns PS00683 Rhodanese C-terminal signature. 263 273 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 SUPERFAMILY SSF52821 162 284 5.76E-32 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 ProSitePatterns PS00380 Rhodanese signature 1. 41 52 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 Pfam PF00581 Rhodanese-like domain 7 130 2.2E-15 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 Pfam PF00581 Rhodanese-like domain 161 275 4.2E-7 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 Gene3D G3DSA:3.40.250.10 2 141 1.2E-46 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 Gene3D G3DSA:3.40.250.10 158 284 3.7E-35 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13170 d0521842430a9078cc46cb324ad849e7 285 PANTHER PTHR11364 1 284 1.9E-86 T 22-04-2016 RMET_RS09045 e0d0aac5e187fea389f06db75f7a8d85 251 Pfam PF12804 MobA-like NTP transferase domain 3 121 4.8E-18 T 22-04-2016 IPR025877 MobA-like NTP transferase RMET_RS09045 e0d0aac5e187fea389f06db75f7a8d85 251 SUPERFAMILY SSF53448 1 245 4.12E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS09045 e0d0aac5e187fea389f06db75f7a8d85 251 Gene3D G3DSA:3.90.550.10 1 240 2.7E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS06590 9e7a0aaac2c9a7792615736063f5bb89 442 PANTHER PTHR35093 18 189 4.8E-35 T 22-04-2016 RMET_RS06590 9e7a0aaac2c9a7792615736063f5bb89 442 PANTHER PTHR35093 205 440 4.8E-35 T 22-04-2016 RMET_RS06590 9e7a0aaac2c9a7792615736063f5bb89 442 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 4 442 2.1E-101 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) RMET_RS06590 9e7a0aaac2c9a7792615736063f5bb89 442 Gene3D G3DSA:2.40.160.60 9 442 9.0E-96 T 22-04-2016 RMET_RS06590 9e7a0aaac2c9a7792615736063f5bb89 442 SUPERFAMILY SSF56935 9 442 1.19E-81 T 22-04-2016 RMET_RS03755 17b19f28426c47c97e22edcec884a0bf 83 SUPERFAMILY SSF54565 1 80 3.4E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain RMET_RS03755 17b19f28426c47c97e22edcec884a0bf 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.783 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03755 17b19f28426c47c97e22edcec884a0bf 83 PANTHER PTHR12919 1 79 3.3E-37 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03755 17b19f28426c47c97e22edcec884a0bf 83 Gene3D G3DSA:3.30.1320.10 1 79 1.2E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain RMET_RS03755 17b19f28426c47c97e22edcec884a0bf 83 Pfam PF00886 Ribosomal protein S16 8 68 1.9E-23 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03755 17b19f28426c47c97e22edcec884a0bf 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 9.2E-27 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS05755 ac7d0bbad065d9420de61da91b43b6ee 230 SUPERFAMILY SSF89155 15 207 4.84E-30 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS05755 ac7d0bbad065d9420de61da91b43b6ee 230 Gene3D G3DSA:1.10.3480.10 16 201 3.6E-18 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS05755 ac7d0bbad065d9420de61da91b43b6ee 230 Pfam PF02613 Nitrate reductase delta subunit 58 177 1.8E-14 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS01910 524ca3afee6771449e43c22790681d04 249 PANTHER PTHR31876:SF1 12 240 4.3E-57 T 22-04-2016 RMET_RS01910 524ca3afee6771449e43c22790681d04 249 PANTHER PTHR31876 12 240 4.3E-57 T 22-04-2016 RMET_RS01910 524ca3afee6771449e43c22790681d04 249 Pfam PF04367 Protein of unknown function (DUF502) 78 183 9.8E-38 T 22-04-2016 IPR007462 Protein of unknown function DUF502 RMET_RS04145 1cf8495b669b8ce5b6e5f6888b8df1bb 605 SMART SM01091 490 570 3.2E-10 T 22-04-2016 IPR005170 Transporter-associated domain RMET_RS04145 1cf8495b669b8ce5b6e5f6888b8df1bb 605 PANTHER PTHR32507:SF7 1 570 2.1E-183 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 RMET_RS04145 1cf8495b669b8ce5b6e5f6888b8df1bb 605 Pfam PF03471 Transporter associated domain 496 566 2.9E-10 T 22-04-2016 IPR005170 Transporter-associated domain RMET_RS04145 1cf8495b669b8ce5b6e5f6888b8df1bb 605 Pfam PF00999 Sodium/hydrogen exchanger family 9 384 1.6E-41 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RMET_RS04145 1cf8495b669b8ce5b6e5f6888b8df1bb 605 PANTHER PTHR32507 1 570 2.1E-183 T 22-04-2016 RMET_RS04145 1cf8495b669b8ce5b6e5f6888b8df1bb 605 SUPERFAMILY SSF56176 497 567 1.53E-8 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS04145 1cf8495b669b8ce5b6e5f6888b8df1bb 605 Gene3D G3DSA:3.30.465.10 497 565 2.2E-9 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS14985 28dcd673ca8ace388651555e183a53de 158 PANTHER PTHR30126:SF25 3 146 6.0E-69 T 22-04-2016 RMET_RS14985 28dcd673ca8ace388651555e183a53de 158 Gene3D G3DSA:3.40.190.10 19 112 1.2E-17 T 22-04-2016 RMET_RS14985 28dcd673ca8ace388651555e183a53de 158 SUPERFAMILY SSF53850 6 147 1.28E-24 T 22-04-2016 RMET_RS14985 28dcd673ca8ace388651555e183a53de 158 Pfam PF03466 LysR substrate binding domain 6 144 4.0E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS14985 28dcd673ca8ace388651555e183a53de 158 PANTHER PTHR30126 3 146 6.0E-69 T 22-04-2016 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 304 7.0E-146 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 3.56E-58 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 3.56E-58 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 3.56E-58 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 3.56E-58 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 3.56E-58 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 305 60.576 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 Gene3D G3DSA:1.20.58.180 214 310 3.4E-36 T 22-04-2016 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 Gene3D G3DSA:3.30.930.10 1 212 4.6E-104 T 22-04-2016 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 PANTHER PTHR30075 2 316 7.1E-235 T 22-04-2016 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 SUPERFAMILY SSF55681 3 304 2.13E-127 T 22-04-2016 RMET_RS02270 75cb72dec54c92da8d93d79239b44e07 317 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 312 1.0E-152 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RMET_RS13825 165bdffa8b742b903fa8a3bbaaf2384e 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 4.3E-49 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RMET_RS13825 165bdffa8b742b903fa8a3bbaaf2384e 188 PANTHER PTHR11241:SF1 1 187 6.6E-77 T 22-04-2016 RMET_RS13825 165bdffa8b742b903fa8a3bbaaf2384e 188 PANTHER PTHR11241 1 187 6.6E-77 T 22-04-2016 RMET_RS13825 165bdffa8b742b903fa8a3bbaaf2384e 188 SUPERFAMILY SSF51283 3 187 5.37E-53 T 22-04-2016 IPR029054 dUTPase-like RMET_RS13825 165bdffa8b742b903fa8a3bbaaf2384e 188 Gene3D G3DSA:2.70.40.10 3 187 8.9E-69 T 22-04-2016 IPR029054 dUTPase-like RMET_RS13825 165bdffa8b742b903fa8a3bbaaf2384e 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.445 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RMET_RS13825 165bdffa8b742b903fa8a3bbaaf2384e 188 Pfam PF00692 dUTPase 82 184 2.0E-6 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RMET_RS01055 23bf39702fec8697d59e9a942f4455c4 469 Pfam PF13520 Amino acid permease 26 429 1.2E-62 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RMET_RS01055 23bf39702fec8697d59e9a942f4455c4 469 PANTHER PTHR11785 151 456 1.1E-214 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RMET_RS01055 23bf39702fec8697d59e9a942f4455c4 469 PANTHER PTHR11785 2 135 1.1E-214 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RMET_RS01055 23bf39702fec8697d59e9a942f4455c4 469 PANTHER PTHR11785:SF405 151 456 1.1E-214 T 22-04-2016 RMET_RS01055 23bf39702fec8697d59e9a942f4455c4 469 PANTHER PTHR11785:SF405 2 135 1.1E-214 T 22-04-2016 RMET_RS01055 23bf39702fec8697d59e9a942f4455c4 469 PIRSF PIRSF006060 6 468 2.1E-90 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 Gene3D G3DSA:3.90.930.12 2 82 1.7E-27 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 PIRSF PIRSF002162 1 177 4.7E-44 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 PANTHER PTHR11655 1 176 1.1E-86 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 SUPERFAMILY SSF56053 83 177 1.83E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 8.2E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 8.2E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 8.2E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 Gene3D G3DSA:3.90.930.12 83 177 1.7E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.6E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 PANTHER PTHR11655:SF14 1 176 1.1E-86 T 22-04-2016 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 Pfam PF00347 Ribosomal protein L6 90 164 2.3E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 Pfam PF00347 Ribosomal protein L6 12 82 6.5E-15 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 SUPERFAMILY SSF56053 1 82 7.67E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS16560 08180f37c8ea5612c1494ccd7740851a 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.967 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS12105 beabdc291b58c612c7ea1d113b8be232 349 PANTHER PTHR30480 13 302 7.2E-100 T 22-04-2016 RMET_RS12105 beabdc291b58c612c7ea1d113b8be232 349 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 12 347 49.215 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 RMET_RS12105 beabdc291b58c612c7ea1d113b8be232 349 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 244 261 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 RMET_RS12105 beabdc291b58c612c7ea1d113b8be232 349 Gene3D G3DSA:3.20.20.300 13 315 2.2E-88 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RMET_RS12105 beabdc291b58c612c7ea1d113b8be232 349 PANTHER PTHR30480:SF7 13 302 7.2E-100 T 22-04-2016 RMET_RS12105 beabdc291b58c612c7ea1d113b8be232 349 SUPERFAMILY SSF51445 12 316 4.84E-81 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RMET_RS12105 beabdc291b58c612c7ea1d113b8be232 349 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 17 314 2.1E-70 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RMET_RS14555 1bfdb9ef18dc13efdfeddb1c117bb407 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.7E-22 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14555 1bfdb9ef18dc13efdfeddb1c117bb407 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.973 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14555 1bfdb9ef18dc13efdfeddb1c117bb407 88 Gene3D G3DSA:1.20.58.110 1 86 5.3E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14555 1bfdb9ef18dc13efdfeddb1c117bb407 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 88 4.0E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14555 1bfdb9ef18dc13efdfeddb1c117bb407 88 PANTHER PTHR33398 1 88 7.3E-26 T 22-04-2016 RMET_RS14555 1bfdb9ef18dc13efdfeddb1c117bb407 88 Pfam PF01649 Ribosomal protein S20 2 84 2.6E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14555 1bfdb9ef18dc13efdfeddb1c117bb407 88 SUPERFAMILY SSF46992 3 86 1.18E-25 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 SUPERFAMILY SSF88659 223 299 3.97E-10 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 SUPERFAMILY SSF88946 112 220 2.62E-43 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 345 371 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 PANTHER PTHR30603 67 381 1.7E-113 T 22-04-2016 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 SUPERFAMILY SSF88659 283 380 4.74E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 Gene3D G3DSA:1.10.601.10 107 219 2.5E-52 T 22-04-2016 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 Gene3D G3DSA:1.10.10.10 317 381 1.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 Pfam PF04539 Sigma-70 region 3 230 306 3.8E-13 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 Pfam PF04542 Sigma-70 region 2 150 219 7.7E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 104 385 2.0E-135 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 Pfam PF04545 Sigma-70, region 4 320 372 9.9E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 146 374 1.3E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 Pfam PF00140 Sigma-70 factor, region 1.2 112 144 1.5E-5 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 65 386 37.936 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 PANTHER PTHR30603:SF15 67 381 1.7E-113 T 22-04-2016 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 174 187 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 PRINTS PR00046 Major sigma-70 factor signature 345 360 5.2E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 PRINTS PR00046 Major sigma-70 factor signature 360 371 5.2E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 PRINTS PR00046 Major sigma-70 factor signature 174 187 5.2E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 PRINTS PR00046 Major sigma-70 factor signature 324 336 5.2E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 PRINTS PR00046 Major sigma-70 factor signature 198 206 5.2E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS10590 e9743f3da5f1f45125feaf0e8ea883a3 386 Gene3D G3DSA:1.10.10.10 223 274 9.0E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05025 d378a6ba469dd27a6929261502d5097e 305 Gene3D G3DSA:2.60.200.30 157 269 8.9E-42 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RMET_RS05025 d378a6ba469dd27a6929261502d5097e 305 PANTHER PTHR20275 67 295 1.0E-84 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RMET_RS05025 d378a6ba469dd27a6929261502d5097e 305 SUPERFAMILY SSF111331 16 297 9.03E-87 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RMET_RS05025 d378a6ba469dd27a6929261502d5097e 305 Hamap MF_00361 NAD kinase [nadK]. 15 295 32.588 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RMET_RS05025 d378a6ba469dd27a6929261502d5097e 305 Pfam PF01513 ATP-NAD kinase 67 277 1.2E-55 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RMET_RS05025 d378a6ba469dd27a6929261502d5097e 305 Gene3D G3DSA:3.40.50.10330 13 156 5.8E-37 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RMET_RS08080 9f4d9017b23478ac6c9c87235c9912bb 186 PANTHER PTHR33931 48 181 2.6E-30 T 22-04-2016 RMET_RS08080 9f4d9017b23478ac6c9c87235c9912bb 186 PANTHER PTHR33931:SF3 48 181 2.6E-30 T 22-04-2016 RMET_RS08080 9f4d9017b23478ac6c9c87235c9912bb 186 Pfam PF03788 LrgA family 70 162 5.8E-22 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 RMET_RS18110 0dec0457cd5665fea5b97b9c26ab90cb 324 Gene3D G3DSA:3.40.630.10 33 154 1.1E-7 T 22-04-2016 RMET_RS18110 0dec0457cd5665fea5b97b9c26ab90cb 324 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 41 236 1.5E-12 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 RMET_RS18110 0dec0457cd5665fea5b97b9c26ab90cb 324 SUPERFAMILY SSF53187 9 321 2.82E-53 T 22-04-2016 RMET_RS05825 2e62461dde1f6dd763b244a6c020953a 120 PANTHER PTHR11803 14 120 1.0E-31 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RMET_RS05825 2e62461dde1f6dd763b244a6c020953a 120 PANTHER PTHR11803:SF17 14 120 1.0E-31 T 22-04-2016 RMET_RS05825 2e62461dde1f6dd763b244a6c020953a 120 Pfam PF01042 Endoribonuclease L-PSP 14 118 1.7E-23 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RMET_RS05825 2e62461dde1f6dd763b244a6c020953a 120 SUPERFAMILY SSF55298 10 119 7.23E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RMET_RS05825 2e62461dde1f6dd763b244a6c020953a 120 Gene3D G3DSA:3.30.1330.40 15 118 4.4E-24 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RMET_RS09245 23867136fd812fd2fc9f05be7407ba25 310 Gene3D G3DSA:3.40.30.10 2 90 2.5E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS09245 23867136fd812fd2fc9f05be7407ba25 310 PANTHER PTHR11260:SF192 1 216 2.8E-29 T 22-04-2016 RMET_RS09245 23867136fd812fd2fc9f05be7407ba25 310 SUPERFAMILY SSF52833 3 93 1.17E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS09245 23867136fd812fd2fc9f05be7407ba25 310 Pfam PF13410 Glutathione S-transferase, C-terminal domain 153 215 1.0E-8 T 22-04-2016 RMET_RS09245 23867136fd812fd2fc9f05be7407ba25 310 PANTHER PTHR11260 1 216 2.8E-29 T 22-04-2016 RMET_RS09245 23867136fd812fd2fc9f05be7407ba25 310 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 80 5.0E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS09245 23867136fd812fd2fc9f05be7407ba25 310 SUPERFAMILY SSF47616 150 218 2.7E-8 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS09245 23867136fd812fd2fc9f05be7407ba25 310 Gene3D G3DSA:1.20.1050.10 91 219 3.7E-11 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS11950 4dc887c290a767f1881755115327f61e 348 Gene3D G3DSA:1.10.287.130 216 284 4.9E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS11950 4dc887c290a767f1881755115327f61e 348 SUPERFAMILY SSF47384 208 287 1.08E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS11950 4dc887c290a767f1881755115327f61e 348 PANTHER PTHR24423 162 348 3.7E-23 T 22-04-2016 RMET_RS11950 4dc887c290a767f1881755115327f61e 348 PANTHER PTHR24423 25 35 3.7E-23 T 22-04-2016 RMET_RS11950 4dc887c290a767f1881755115327f61e 348 SMART SM00388 224 288 1.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS11950 4dc887c290a767f1881755115327f61e 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 287 4.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS11950 4dc887c290a767f1881755115327f61e 348 Pfam PF08521 Two-component sensor kinase N-terminal 15 147 1.0E-8 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RMET_RS11950 4dc887c290a767f1881755115327f61e 348 PANTHER PTHR24423:SF474 25 35 3.7E-23 T 22-04-2016 RMET_RS11950 4dc887c290a767f1881755115327f61e 348 PANTHER PTHR24423:SF474 162 348 3.7E-23 T 22-04-2016 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 Pfam PF04408 Helicase associated domain (HA2) 478 547 1.2E-19 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 SMART SM00490 315 415 1.1E-14 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 SMART SM00847 475 565 2.8E-35 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 SMART SM00382 83 381 1.6E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 Pfam PF00270 DEAD/DEAH box helicase 77 231 4.1E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 PANTHER PTHR18934 66 715 7.3E-304 T 22-04-2016 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 PANTHER PTHR18934 750 878 7.3E-304 T 22-04-2016 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 SMART SM00487 43 261 7.9E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 Pfam PF11898 Domain of unknown function (DUF3418) 723 1312 8.9E-221 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 PANTHER PTHR18934:SF109 66 715 7.3E-304 T 22-04-2016 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 PANTHER PTHR18934:SF109 750 878 7.3E-304 T 22-04-2016 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 Gene3D G3DSA:3.40.50.300 289 427 5.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 609 709 3.6E-14 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 Pfam PF00271 Helicase conserved C-terminal domain 298 414 7.5E-10 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 SUPERFAMILY SSF52540 65 614 5.3E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 Gene3D G3DSA:3.40.50.300 68 232 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10350 a82d8303708856d5bbcc3d62621253f6 1316 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 57 1312 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 SUPERFAMILY SSF53822 29 368 2.5E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 335 350 8.7E-39 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 8.7E-39 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 8.7E-39 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 8.7E-39 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 283 296 8.7E-39 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 8.7E-39 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 93 103 8.7E-39 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PANTHER PTHR30483 1 365 3.4E-129 T 22-04-2016 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 PANTHER PTHR30483:SF16 1 365 3.4E-129 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 Pfam PF13458 Periplasmic binding protein 30 366 3.6E-60 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS12445 2e985c3f5dec0b6af04cb391ff451f6d 375 Gene3D G3DSA:3.40.50.2300 29 230 1.3E-65 T 22-04-2016 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 Pfam PF00271 Helicase conserved C-terminal domain 810 914 1.2E-16 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SUPERFAMILY SSF52540 17 345 1.9E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SMART SM00487 605 795 9.6E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SUPERFAMILY SSF143517 999 1149 5.62E-40 T 22-04-2016 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 Pfam PF03461 TRCF domain 1015 1105 2.4E-26 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 Gene3D G3DSA:3.30.2060.10 140 212 3.6E-12 T 22-04-2016 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 Pfam PF02559 CarD-like/TRCF domain 485 580 4.0E-26 T 22-04-2016 IPR003711 CarD-like/TRCF domain RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SUPERFAMILY SSF52540 788 995 7.99E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 Gene3D G3DSA:3.40.50.300 593 791 1.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SMART SM01058 484 581 5.9E-48 T 22-04-2016 IPR003711 CarD-like/TRCF domain RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SMART SM00982 1013 1113 6.5E-45 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SMART SM00490 831 915 3.1E-15 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 PANTHER PTHR14025 388 1142 0.0 T 22-04-2016 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1109 27.998 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SUPERFAMILY SSF141259 476 553 9.15E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 PANTHER PTHR14025:SF21 388 1142 0.0 T 22-04-2016 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SUPERFAMILY SSF52540 362 469 6.37E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1086 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 SUPERFAMILY SSF52540 528 788 9.23E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 Pfam PF00270 DEAD/DEAH box helicase 610 767 1.4E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS09800 f38bec5c4ada3049d730004ab4a0df82 1150 Gene3D G3DSA:3.40.50.300 803 961 1.9E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07760 2c904699e3ee3c751d1c1fe9855b9568 148 PANTHER PTHR32071:SF16 10 148 9.6E-33 T 22-04-2016 RMET_RS07760 2c904699e3ee3c751d1c1fe9855b9568 148 SUPERFAMILY SSF52172 8 140 1.08E-33 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS07760 2c904699e3ee3c751d1c1fe9855b9568 148 SMART SM00448 8 119 1.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS07760 2c904699e3ee3c751d1c1fe9855b9568 148 Pfam PF00072 Response regulator receiver domain 10 118 5.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS07760 2c904699e3ee3c751d1c1fe9855b9568 148 Gene3D G3DSA:3.40.50.2300 9 139 1.5E-34 T 22-04-2016 RMET_RS07760 2c904699e3ee3c751d1c1fe9855b9568 148 PANTHER PTHR32071 10 148 9.6E-33 T 22-04-2016 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 SUPERFAMILY SSF47729 1 91 6.33E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.0E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.0E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.0E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.2E-36 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 SMART SM00411 1 91 2.1E-36 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 Gene3D G3DSA:4.10.520.10 1 91 1.4E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.9E-26 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.549 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 PANTHER PTHR33175:SF5 1 109 2.2E-41 T 22-04-2016 RMET_RS03635 8cf446e09baeeec726e302ce09543cb0 135 PANTHER PTHR33175 1 109 2.2E-41 T 22-04-2016 RMET_RS10560 e044b32cf8e7dfc3933738539745ccdc 384 Pfam PF04055 Radical SAM superfamily 108 286 1.7E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS10560 e044b32cf8e7dfc3933738539745ccdc 384 SUPERFAMILY SSF102114 104 320 8.11E-13 T 22-04-2016 RMET_RS10560 e044b32cf8e7dfc3933738539745ccdc 384 PANTHER PTHR30544 6 356 2.2E-168 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS10560 e044b32cf8e7dfc3933738539745ccdc 384 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 353 73.95 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS10560 e044b32cf8e7dfc3933738539745ccdc 384 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 357 4.1E-138 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS10560 e044b32cf8e7dfc3933738539745ccdc 384 Gene3D G3DSA:3.20.20.70 104 334 2.9E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS10560 e044b32cf8e7dfc3933738539745ccdc 384 PIRSF PIRSF006004 3 365 1.0E-147 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS10560 e044b32cf8e7dfc3933738539745ccdc 384 PANTHER PTHR30544:SF5 6 356 2.2E-168 T 22-04-2016 RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 PIRSF PIRSF000139 7 421 1.4E-113 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 PANTHER PTHR32479:SF2 14 414 5.4E-116 T 22-04-2016 RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 Pfam PF12838 4Fe-4S dicluster domain 24 89 1.5E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 PANTHER PTHR32479 14 414 5.4E-116 T 22-04-2016 RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 SUPERFAMILY SSF54862 21 118 1.88E-20 T 22-04-2016 RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 Gene3D G3DSA:1.10.1060.10 10 102 3.8E-22 T 22-04-2016 RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 Pfam PF02754 Cysteine-rich domain 312 395 1.2E-11 T 22-04-2016 IPR004017 Cysteine-rich domain RMET_RS14680 33b12cd2a0618e1ddfc398d8cdc30c08 423 Pfam PF02754 Cysteine-rich domain 177 260 1.9E-12 T 22-04-2016 IPR004017 Cysteine-rich domain RMET_RS00625 4bf72c13ee82402ab796fb402b04a530 183 PANTHER PTHR13256:SF29 4 176 1.1E-28 T 22-04-2016 RMET_RS00625 4bf72c13ee82402ab796fb402b04a530 183 PANTHER PTHR13256 4 176 1.1E-28 T 22-04-2016 RMET_RS00625 4bf72c13ee82402ab796fb402b04a530 183 Gene3D G3DSA:3.40.630.30 2 176 8.2E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS00625 4bf72c13ee82402ab796fb402b04a530 183 SUPERFAMILY SSF55729 2 175 5.8E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS00625 4bf72c13ee82402ab796fb402b04a530 183 Pfam PF13302 Acetyltransferase (GNAT) domain 9 150 9.7E-22 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 PANTHER PTHR12231:SF83 24 33 6.5E-39 T 22-04-2016 RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 PANTHER PTHR12231:SF83 260 404 6.5E-39 T 22-04-2016 RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 SMART SM00450 135 234 2.2E-6 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 SMART SM00450 11 110 3.1E-13 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 SMART SM00450 271 360 1.0 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 SMART SM00450 383 477 1.1E-8 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 SUPERFAMILY SSF52821 379 527 6.29E-34 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 Gene3D G3DSA:3.40.250.10 125 242 3.9E-17 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 Gene3D G3DSA:3.40.250.10 371 483 8.7E-22 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 Gene3D G3DSA:3.40.250.10 269 356 5.3E-13 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 SUPERFAMILY SSF52821 8 126 1.57E-25 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 PANTHER PTHR12231 24 33 6.5E-39 T 22-04-2016 RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 PANTHER PTHR12231 260 404 6.5E-39 T 22-04-2016 RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 Pfam PF00581 Rhodanese-like domain 18 106 2.4E-11 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 Pfam PF00581 Rhodanese-like domain 139 230 1.7E-8 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 Pfam PF00581 Rhodanese-like domain 289 356 1.1E-4 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 Pfam PF00581 Rhodanese-like domain 387 473 5.4E-8 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 Gene3D G3DSA:3.40.250.10 6 121 7.7E-20 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 SUPERFAMILY SSF52821 112 241 5.24E-28 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS11120 a83c9de09c4fa579bb38fd03f7d83536 532 SUPERFAMILY SSF52821 263 356 1.83E-18 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 Gene3D G3DSA:3.30.70.240 400 478 1.5E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 SUPERFAMILY SSF54980 399 514 2.21E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 Gene3D G3DSA:2.40.50.250 484 578 9.3E-42 T 22-04-2016 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 SUPERFAMILY SSF50447 152 300 3.53E-26 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 SUPERFAMILY SSF54980 303 388 9.35E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 PANTHER PTHR23115 5 594 2.3E-275 T 22-04-2016 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 SUPERFAMILY SSF52540 4 207 1.15E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 600 4.7E-283 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 155 4.6E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 Pfam PF00679 Elongation factor G C-terminus 399 478 2.9E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 Gene3D G3DSA:3.30.70.870 305 399 1.4E-37 T 22-04-2016 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 PANTHER PTHR23115:SF14 5 594 2.3E-275 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 Pfam PF03144 Elongation factor Tu domain 2 219 290 4.2E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 Gene3D G3DSA:3.40.50.300 4 205 1.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 Gene3D G3DSA:2.40.30.10 206 304 2.1E-21 T 22-04-2016 RMET_RS10130 5d88cf1dabecba39619540ccf37a5a21 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 2.9E-55 T 22-04-2016 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 SMART SM00342 188 270 6.1E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 Gene3D G3DSA:1.10.10.60 175 225 8.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 PANTHER PTHR11019:SF108 16 278 6.4E-102 T 22-04-2016 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 Pfam PF12833 Helix-turn-helix domain 194 272 6.6E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 Gene3D G3DSA:2.60.120.280 16 157 9.0E-20 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 Pfam PF02311 AraC-like ligand binding domain 16 154 2.6E-27 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 PANTHER PTHR11019 16 278 6.4E-102 T 22-04-2016 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 SUPERFAMILY SSF46689 175 222 1.61E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 Gene3D G3DSA:1.10.10.60 226 272 5.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 SUPERFAMILY SSF46689 224 273 2.46E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS12310 ce324360ba454c59b11f281cd733837e 279 SUPERFAMILY SSF51215 15 155 6.54E-28 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RMET_RS00300 5107d7dd19d69686ca7f1172d0e83f61 369 Gene3D G3DSA:1.10.150.130 30 125 2.2E-20 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS00300 5107d7dd19d69686ca7f1172d0e83f61 369 Pfam PF00589 Phage integrase family 141 323 3.8E-37 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS00300 5107d7dd19d69686ca7f1172d0e83f61 369 SUPERFAMILY SSF56349 33 331 2.24E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS00300 5107d7dd19d69686ca7f1172d0e83f61 369 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 33 114 4.9E-16 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS00300 5107d7dd19d69686ca7f1172d0e83f61 369 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 27 337 32.74 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RMET_RS00300 5107d7dd19d69686ca7f1172d0e83f61 369 Gene3D G3DSA:1.10.443.10 138 331 2.9E-50 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS00300 5107d7dd19d69686ca7f1172d0e83f61 369 PANTHER PTHR30349:SF17 33 351 1.7E-103 T 22-04-2016 RMET_RS00300 5107d7dd19d69686ca7f1172d0e83f61 369 PANTHER PTHR30349 33 351 1.7E-103 T 22-04-2016 RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 PANTHER PTHR24096 15 558 7.1E-165 T 22-04-2016 RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 Gene3D G3DSA:3.40.50.980 30 220 9.6E-39 T 22-04-2016 RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 473 550 6.5E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 SUPERFAMILY SSF56801 24 559 3.27E-153 T 22-04-2016 RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 Gene3D G3DSA:3.40.50.980 221 377 2.8E-47 T 22-04-2016 RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 Pfam PF00501 AMP-binding enzyme 34 463 4.7E-109 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 Gene3D G3DSA:2.30.38.10 378 455 6.3E-26 T 22-04-2016 RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS13245 3a55304660835e8fa6ef8e6d83b77999 566 Gene3D G3DSA:3.30.300.30 461 561 6.6E-29 T 22-04-2016 RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 SMART SM00418 20 99 8.1E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 Pfam PF01022 Bacterial regulatory protein, arsR family 28 74 1.8E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 1.7E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.7E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 1.7E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 SUPERFAMILY SSF46785 17 102 1.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 Gene3D G3DSA:1.10.10.10 11 102 2.0E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 PANTHER PTHR33154:SF10 11 103 1.5E-28 T 22-04-2016 RMET_RS11895 9f8f3ea309ee6dbba7bfb7121efadb0c 103 PANTHER PTHR33154 11 103 1.5E-28 T 22-04-2016 RMET_RS05040 0ef1091784a8aeec227c130ab5a1cce9 131 PANTHER PTHR11079:SF70 1 43 4.1E-12 T 22-04-2016 RMET_RS05040 0ef1091784a8aeec227c130ab5a1cce9 131 Pfam PF01479 S4 domain 12 57 8.2E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS05040 0ef1091784a8aeec227c130ab5a1cce9 131 SMART SM00363 11 78 1.3E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS05040 0ef1091784a8aeec227c130ab5a1cce9 131 Gene3D G3DSA:3.10.290.10 10 105 1.9E-34 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS05040 0ef1091784a8aeec227c130ab5a1cce9 131 PIRSF PIRSF016821 8 131 2.9E-41 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 RMET_RS05040 0ef1091784a8aeec227c130ab5a1cce9 131 PANTHER PTHR11079 1 43 4.1E-12 T 22-04-2016 RMET_RS05040 0ef1091784a8aeec227c130ab5a1cce9 131 SUPERFAMILY SSF55174 10 108 2.75E-28 T 22-04-2016 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 369 1.1E-113 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 PANTHER PTHR13847:SF5 6 367 1.7E-59 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 PIRSF PIRSF006487 1 373 2.0E-77 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 Hamap MF_00259 Aminomethyltransferase [gcvT]. 2 369 43.62 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 268 4.2E-84 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RMET_RS17490 5a6a465d1117d212a59943626308df22 375 Gene3D G3DSA:3.30.1360.120 3 54 6.2E-50 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 Gene3D G3DSA:3.30.1360.120 156 246 6.2E-50 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 PANTHER PTHR13847 6 367 1.7E-59 T 22-04-2016 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 276 364 1.7E-16 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 SUPERFAMILY SSF103025 3 286 1.07E-88 T 22-04-2016 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 Gene3D G3DSA:3.30.70.1400 55 140 6.7E-29 T 22-04-2016 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 Gene3D G3DSA:2.40.30.110 290 371 1.4E-24 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RMET_RS17490 5a6a465d1117d212a59943626308df22 375 SUPERFAMILY SSF101790 285 371 4.91E-21 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RMET_RS10240 731aa3488b7759743cb893eb7a193875 365 PANTHER PTHR12169 1 358 2.8E-152 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RMET_RS10240 731aa3488b7759743cb893eb7a193875 365 Pfam PF03969 AFG1-like ATPase 3 355 2.6E-128 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RMET_RS10240 731aa3488b7759743cb893eb7a193875 365 Gene3D G3DSA:3.40.50.300 15 167 7.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10240 731aa3488b7759743cb893eb7a193875 365 SUPERFAMILY SSF52540 47 209 1.44E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10240 731aa3488b7759743cb893eb7a193875 365 PANTHER PTHR12169:SF11 1 358 2.8E-152 T 22-04-2016 RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 254 371 1.6E-19 T 22-04-2016 IPR000014 PAS domain RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 SUPERFAMILY SSF55785 256 362 6.28E-27 T 22-04-2016 IPR000014 PAS domain RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 SUPERFAMILY SSF55073 380 536 7.85E-51 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 Pfam PF13426 PAS domain 261 362 3.8E-17 T 22-04-2016 IPR000014 PAS domain RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 PANTHER PTHR10799 38 531 4.3E-33 T 22-04-2016 RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 Gene3D G3DSA:3.30.450.20 261 363 2.0E-25 T 22-04-2016 RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 SMART SM00267 364 536 1.7E-62 T 22-04-2016 IPR000160 GGDEF domain RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 Pfam PF02203 Tar ligand binding domain homologue 38 178 5.8E-10 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 531 4.5E-49 T 22-04-2016 IPR000160 GGDEF domain RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 372 533 1.8E-43 T 22-04-2016 IPR000160 GGDEF domain RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 SMART SM00091 245 316 7.7E-6 T 22-04-2016 IPR000014 PAS domain RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 PANTHER PTHR10799:SF774 38 531 4.3E-33 T 22-04-2016 RMET_RS08460 51cfa9d24f2c01a13dbc9c33111a8fde 546 Gene3D G3DSA:3.30.70.270 376 537 1.4E-55 T 22-04-2016 RMET_RS05215 957716b9f219891b48a83c1801d3fe59 240 Gene3D G3DSA:2.70.70.10 106 237 9.5E-32 T 22-04-2016 RMET_RS05215 957716b9f219891b48a83c1801d3fe59 240 SMART SM00257 46 90 2.9E-12 T 22-04-2016 IPR018392 LysM domain RMET_RS05215 957716b9f219891b48a83c1801d3fe59 240 Pfam PF01551 Peptidase family M23 144 232 2.1E-21 T 22-04-2016 IPR016047 Peptidase M23 RMET_RS05215 957716b9f219891b48a83c1801d3fe59 240 Gene3D G3DSA:3.10.350.10 46 89 2.6E-16 T 22-04-2016 IPR018392 LysM domain RMET_RS05215 957716b9f219891b48a83c1801d3fe59 240 Pfam PF01476 LysM domain 47 89 1.8E-11 T 22-04-2016 IPR018392 LysM domain RMET_RS05215 957716b9f219891b48a83c1801d3fe59 240 SUPERFAMILY SSF51261 47 236 7.32E-37 T 22-04-2016 IPR011055 Duplicated hybrid motif RMET_RS05215 957716b9f219891b48a83c1801d3fe59 240 PANTHER PTHR21666 127 240 1.5E-27 T 22-04-2016 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 SUPERFAMILY SSF53067 170 400 2.88E-71 T 22-04-2016 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PANTHER PTHR21060:SF11 4 401 1.2E-141 T 22-04-2016 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 SUPERFAMILY SSF53067 7 206 7.12E-57 T 22-04-2016 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 Hamap MF_00020 Acetate kinase [ackA]. 1 405 149.112 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PRINTS PR00471 Acetate kinase family signature 307 320 1.7E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PRINTS PR00471 Acetate kinase family signature 329 345 1.7E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PRINTS PR00471 Acetate kinase family signature 185 198 1.7E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PRINTS PR00471 Acetate kinase family signature 214 235 1.7E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PRINTS PR00471 Acetate kinase family signature 382 394 1.7E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PRINTS PR00471 Acetate kinase family signature 8 19 1.7E-36 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PANTHER PTHR21060 4 401 1.2E-141 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 Gene3D G3DSA:3.30.420.40 116 215 8.5E-10 T 22-04-2016 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 PIRSF PIRSF000722 4 404 3.2E-128 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 Gene3D G3DSA:3.30.420.40 216 400 2.9E-64 T 22-04-2016 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 214 231 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 TIGRFAM TIGR00016 ackA: acetate kinase 6 399 1.1E-102 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS02840 c3b36ba49fd305afd32a99204279ff2d 405 Pfam PF00871 Acetokinase family 8 394 3.0E-100 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 RMET_RS09135 0cf8dbd6e27c5907edd01d822dc93300 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RMET_RS09135 0cf8dbd6e27c5907edd01d822dc93300 265 Gene3D G3DSA:3.20.20.140 1 257 2.2E-89 T 22-04-2016 RMET_RS09135 0cf8dbd6e27c5907edd01d822dc93300 265 PANTHER PTHR10060:SF20 1 260 1.2E-117 T 22-04-2016 RMET_RS09135 0cf8dbd6e27c5907edd01d822dc93300 265 PIRSF PIRSF005902 1 260 2.4E-77 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS09135 0cf8dbd6e27c5907edd01d822dc93300 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 257 6.6E-83 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 RMET_RS09135 0cf8dbd6e27c5907edd01d822dc93300 265 Pfam PF01026 TatD related DNase 3 257 2.2E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS09135 0cf8dbd6e27c5907edd01d822dc93300 265 PANTHER PTHR10060 1 260 1.2E-117 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS09135 0cf8dbd6e27c5907edd01d822dc93300 265 SUPERFAMILY SSF51556 1 257 3.72E-89 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 PANTHER PTHR11700 1 102 2.4E-50 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 SUPERFAMILY SSF54999 5 102 4.19E-38 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 102 4.4E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.9E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.9E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.9E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.729 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 SMART SM01403 7 101 6.0E-57 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 9.6E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RMET_RS16665 5d43d9aba72cd3c6369477972bb14339 102 Gene3D G3DSA:3.30.70.600 3 102 5.4E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RMET_RS13535 9192e59f67b6ffab192131865b33e16f 393 Gene3D G3DSA:3.40.640.10 53 273 1.1E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS13535 9192e59f67b6ffab192131865b33e16f 393 Gene3D G3DSA:3.90.1150.10 274 392 1.3E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS13535 9192e59f67b6ffab192131865b33e16f 393 PANTHER PTHR11751:SF401 11 393 5.0E-137 T 22-04-2016 RMET_RS13535 9192e59f67b6ffab192131865b33e16f 393 SUPERFAMILY SSF53383 9 392 7.84E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS13535 9192e59f67b6ffab192131865b33e16f 393 Pfam PF00155 Aminotransferase class I and II 36 388 2.8E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS13535 9192e59f67b6ffab192131865b33e16f 393 PANTHER PTHR11751 11 393 5.0E-137 T 22-04-2016 RMET_RS13535 9192e59f67b6ffab192131865b33e16f 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 SUPERFAMILY SSF56731 116 428 2.22E-101 T 22-04-2016 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Pfam PF01807 CHC2 zinc finger 3 97 1.0E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Gene3D G3DSA:3.40.1360.10 248 374 1.5E-44 T 22-04-2016 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Gene3D G3DSA:1.10.860.10 451 596 1.3E-6 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 258 7.2E-36 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 TIGRFAM TIGR01391 dnaG: DNA primase 2 424 3.3E-138 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Gene3D G3DSA:3.90.580.10 2 98 1.4E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 PIRSF PIRSF002811 1 603 3.4E-143 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Pfam PF08278 DNA primase DnaG DnaB-binding 466 593 2.7E-13 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Pfam PF13662 Toprim domain 268 334 1.9E-15 T 22-04-2016 IPR006171 Toprim domain RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 SMART SM00400 33 87 2.1E-34 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 SMART SM00493 266 337 3.5E-15 T 22-04-2016 IPR006171 Toprim domain RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Pfam PF10410 DnaB-helicase binding domain of primase 376 427 6.4E-10 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 PANTHER PTHR30313 1 436 6.7E-142 T 22-04-2016 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 SMART SM00766 464 594 3.1E-9 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 SUPERFAMILY SSF57783 2 97 9.52E-37 T 22-04-2016 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Hamap MF_00974 DNA primase [dnaG]. 1 594 28.292 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Gene3D G3DSA:1.20.50.20 375 432 2.1E-16 T 22-04-2016 RMET_RS13110 d703a78eff62297bac16d9389aea4872 613 Gene3D G3DSA:3.90.980.10 116 247 4.5E-41 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 Pfam PF03466 LysR substrate binding domain 91 302 2.6E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 PANTHER PTHR30293:SF0 1 319 1.2E-72 T 22-04-2016 RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 Gene3D G3DSA:3.40.190.10 92 199 4.6E-20 T 22-04-2016 RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 Gene3D G3DSA:3.40.190.10 200 268 4.0E-13 T 22-04-2016 RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 SUPERFAMILY SSF53850 91 305 3.1E-36 T 22-04-2016 RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 SUPERFAMILY SSF46785 3 112 3.23E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 Gene3D G3DSA:1.10.10.10 4 86 3.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17160 ed2f1bf3062f9a813bce59216948bad6 320 PANTHER PTHR30293 1 319 1.2E-72 T 22-04-2016 RMET_RS06730 fe9710d51817701473de3e77c1894b1e 154 Gene3D G3DSA:3.40.50.620 1 148 4.7E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS06730 fe9710d51817701473de3e77c1894b1e 154 PANTHER PTHR31964:SF45 1 152 3.2E-34 T 22-04-2016 RMET_RS06730 fe9710d51817701473de3e77c1894b1e 154 SUPERFAMILY SSF52402 1 146 1.59E-38 T 22-04-2016 RMET_RS06730 fe9710d51817701473de3e77c1894b1e 154 PRINTS PR01438 Universal stress protein signature 124 146 9.1E-19 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS06730 fe9710d51817701473de3e77c1894b1e 154 PRINTS PR01438 Universal stress protein signature 106 118 9.1E-19 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS06730 fe9710d51817701473de3e77c1894b1e 154 PRINTS PR01438 Universal stress protein signature 2 20 9.1E-19 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS06730 fe9710d51817701473de3e77c1894b1e 154 PANTHER PTHR31964 1 152 3.2E-34 T 22-04-2016 RMET_RS06730 fe9710d51817701473de3e77c1894b1e 154 Pfam PF00582 Universal stress protein family 1 146 3.5E-33 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 SMART SM00387 331 443 1.8E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 284 2.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 SMART SM00388 221 289 8.9E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 SUPERFAMILY SSF47384 216 284 3.73E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 5.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 5.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 5.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 440 5.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 SUPERFAMILY SSF55874 314 441 9.82E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 PANTHER PTHR24423 191 443 1.8E-48 T 22-04-2016 RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 441 2.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 Gene3D G3DSA:3.30.565.10 300 441 9.4E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14795 eaca4a43eecdfad8a2523694c1aae628 443 PANTHER PTHR24423:SF497 191 443 1.8E-48 T 22-04-2016 RMET_RS06470 d8e6ba1b576a10becf8bc496523c81a0 379 PANTHER PTHR10029 1 368 8.9E-96 T 22-04-2016 RMET_RS06470 d8e6ba1b576a10becf8bc496523c81a0 379 PANTHER PTHR10029:SF4 1 368 8.9E-96 T 22-04-2016 RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 SUPERFAMILY SSF53335 5 267 2.48E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 Pfam PF00398 Ribosomal RNA adenine dimethylase 10 265 2.4E-56 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 PANTHER PTHR11727 7 267 2.8E-84 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 Gene3D G3DSA:1.10.8.100 205 268 7.1E-19 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 Gene3D G3DSA:3.40.50.150 6 194 1.2E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 269 53.998 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 SMART SM00650 25 195 1.6E-78 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RMET_RS02220 6f1e99fc8ad8772949497c651250c774 278 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 266 1.2E-77 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RMET_RS13490 3eaf2247b295860fa1496eadeed1090e 174 Pfam PF12019 Type II transport protein GspH 50 160 2.0E-7 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RMET_RS13490 3eaf2247b295860fa1496eadeed1090e 174 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 34 1.9E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS13490 3eaf2247b295860fa1496eadeed1090e 174 SUPERFAMILY SSF54523 16 143 2.04E-10 T 22-04-2016 RMET_RS13490 3eaf2247b295860fa1496eadeed1090e 174 Pfam PF13633 Prokaryotic N-terminal methylation site 13 38 6.0E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS01885 f50e8d1a7c6f29906954de33da6e523f 329 Pfam PF04280 Tim44-like domain 197 327 4.9E-17 T 22-04-2016 IPR007379 Tim44-like domain RMET_RS01885 f50e8d1a7c6f29906954de33da6e523f 329 SMART SM00978 196 327 2.0E-48 T 22-04-2016 IPR007379 Tim44-like domain RMET_RS01885 f50e8d1a7c6f29906954de33da6e523f 329 SUPERFAMILY SSF54427 196 328 2.63E-12 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS01885 f50e8d1a7c6f29906954de33da6e523f 329 PANTHER PTHR41542 1 328 3.6E-36 T 22-04-2016 RMET_RS01885 f50e8d1a7c6f29906954de33da6e523f 329 PANTHER PTHR41542:SF1 1 328 3.6E-36 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 ProSitePatterns PS00756 Protein secY signature 2. 172 189 - T 22-04-2016 IPR030659 SecY conserved site RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 271 290 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 372 390 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 77 97 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 153 178 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 404 422 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 179 202 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 118 141 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 317 339 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 25 43 2.9E-93 T 22-04-2016 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PIRSF PIRSF004557 2 442 7.8E-124 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 22 431 4.2E-128 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 SUPERFAMILY SSF103491 12 426 4.05E-131 T 22-04-2016 IPR023201 SecY subunit domain RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 Hamap MF_01465 Protein translocase subunit SecY [secY]. 12 435 29.474 T 22-04-2016 IPR026593 Protein translocase subunit SecY RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PANTHER PTHR10906 12 447 3.3E-214 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 ProSitePatterns PS00755 Protein secY signature 1. 78 97 - T 22-04-2016 IPR030659 SecY conserved site RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 Gene3D G3DSA:1.10.3370.10 12 439 9.7E-165 T 22-04-2016 IPR023201 SecY subunit domain RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 Pfam PF00344 SecY translocase 78 419 1.2E-114 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RMET_RS16535 333404be4fc4ca3b067963299b3981b9 447 PANTHER PTHR10906:SF2 12 447 3.3E-214 T 22-04-2016 RMET_RS14995 b7fbd6a8580e5e262fdb28573594634f 327 Gene3D G3DSA:3.40.50.720 5 115 1.2E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14995 b7fbd6a8580e5e262fdb28573594634f 327 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 289 6.7E-41 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RMET_RS14995 b7fbd6a8580e5e262fdb28573594634f 327 PANTHER PTHR10996 6 316 7.1E-74 T 22-04-2016 RMET_RS14995 b7fbd6a8580e5e262fdb28573594634f 327 SUPERFAMILY SSF52283 5 131 2.84E-28 T 22-04-2016 RMET_RS14995 b7fbd6a8580e5e262fdb28573594634f 327 Gene3D G3DSA:3.40.50.720 116 291 4.1E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14995 b7fbd6a8580e5e262fdb28573594634f 327 SUPERFAMILY SSF51735 102 290 1.88E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14995 b7fbd6a8580e5e262fdb28573594634f 327 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 319 1.3E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RMET_RS10220 f4f8119ade6a55b73f71b5d5f026d766 221 SUPERFAMILY SSF46626 21 201 1.05E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10220 f4f8119ade6a55b73f71b5d5f026d766 221 PANTHER PTHR10422:SF23 26 166 1.3E-82 T 22-04-2016 RMET_RS10220 f4f8119ade6a55b73f71b5d5f026d766 221 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 10 188 1.4E-82 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RMET_RS10220 f4f8119ade6a55b73f71b5d5f026d766 221 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 10 189 3.3E-79 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RMET_RS10220 f4f8119ade6a55b73f71b5d5f026d766 221 PANTHER PTHR10422 26 166 1.3E-82 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS10220 f4f8119ade6a55b73f71b5d5f026d766 221 Gene3D G3DSA:1.10.760.10 21 202 4.9E-35 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS13080 60fc0f128f5f2ba4741c9b2cec32c964 263 Gene3D G3DSA:3.90.226.10 1 260 3.7E-94 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS13080 60fc0f128f5f2ba4741c9b2cec32c964 263 PANTHER PTHR11941 3 260 2.6E-96 T 22-04-2016 RMET_RS13080 60fc0f128f5f2ba4741c9b2cec32c964 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RMET_RS13080 60fc0f128f5f2ba4741c9b2cec32c964 263 SUPERFAMILY SSF52096 1 262 1.51E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS13080 60fc0f128f5f2ba4741c9b2cec32c964 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 262 2.7E-68 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 SUPERFAMILY SSF53067 188 383 1.98E-68 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Gene3D G3DSA:3.30.30.30 53 106 1.8E-24 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 SUPERFAMILY SSF100920 386 541 1.57E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 389 408 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 366 386 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 199 209 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 335 351 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 470 486 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Gene3D G3DSA:2.60.34.10 391 532 7.9E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 SUPERFAMILY SSF53067 4 184 2.91E-63 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Gene3D G3DSA:1.20.1270.10 533 604 7.5E-29 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Gene3D G3DSA:3.30.420.40 195 230 2.1E-33 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Gene3D G3DSA:3.30.420.40 320 361 2.1E-33 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 4.4E-290 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PANTHER PTHR19375 2 648 0.0 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 644 36.798 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 SUPERFAMILY SSF100934 508 611 5.62E-23 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Pfam PF00012 Hsp70 protein 4 604 8.3E-261 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Gene3D G3DSA:3.30.420.40 4 52 4.4E-61 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Gene3D G3DSA:3.30.420.40 119 194 4.4E-61 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 Gene3D G3DSA:3.90.640.10 231 315 7.0E-31 T 22-04-2016 RMET_RS14645 acf50c3df6632dc5af72ee5141f083fe 648 PANTHER PTHR19375:SF173 2 648 0.0 T 22-04-2016 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SMART SM00086 442 484 1.8E-4 T 22-04-2016 IPR001610 PAC motif RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 PANTHER PTHR24423 366 505 2.1E-78 T 22-04-2016 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 PANTHER PTHR24423 634 870 2.1E-78 T 22-04-2016 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 PANTHER PTHR24423 64 126 2.1E-78 T 22-04-2016 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SMART SM00388 636 706 4.8E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 Gene3D G3DSA:3.30.565.10 706 864 9.1E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SUPERFAMILY SSF55785 355 482 3.66E-26 T 22-04-2016 IPR000014 PAS domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 Gene3D G3DSA:3.30.450.20 355 481 1.6E-25 T 22-04-2016 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SUPERFAMILY SSF47384 629 704 6.08E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SMART SM00387 748 865 3.3E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SMART SM00091 496 562 64.0 T 22-04-2016 IPR000014 PAS domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SMART SM00091 368 435 4.2E-10 T 22-04-2016 IPR000014 PAS domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SUPERFAMILY SSF55785 481 612 1.93E-9 T 22-04-2016 IPR000014 PAS domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 Gene3D G3DSA:3.30.450.20 482 612 2.3E-10 T 22-04-2016 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 Pfam PF00989 PAS fold 369 481 2.0E-18 T 22-04-2016 IPR013767 PAS fold GO:0006355 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 750 864 5.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 Pfam PF13188 PAS domain 497 538 0.0065 T 22-04-2016 IPR000014 PAS domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 SUPERFAMILY SSF55874 696 863 1.18E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 495 620 5.9E-7 T 22-04-2016 IPR000014 PAS domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 368 491 7.4E-29 T 22-04-2016 IPR000014 PAS domain RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 862 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 823 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 824 842 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS06030 ec16f24875955a2cf0fec595c26fc702 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 809 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PANTHER PTHR24322:SF328 12 150 2.5E-48 T 22-04-2016 RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PANTHER PTHR24322:SF328 166 198 2.5E-48 T 22-04-2016 RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 Gene3D G3DSA:3.40.50.720 1 273 1.0E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 SUPERFAMILY SSF51735 6 273 4.14E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PANTHER PTHR24322 12 150 2.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PANTHER PTHR24322 166 198 2.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.7E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.7E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 1.7E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.7E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.7E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 Pfam PF00106 short chain dehydrogenase 8 210 3.2E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS12700 78cbf11e2a399be8aa4717dad1d2ad26 276 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 0.0011 T 22-04-2016 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 9 103 1.3E-7 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 177 276 2.8E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 Gene3D G3DSA:2.160.20.70 165 280 7.7E-39 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 PANTHER PTHR34108:SF1 169 282 4.4E-34 T 22-04-2016 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 PANTHER PTHR34108:SF1 1 135 4.4E-34 T 22-04-2016 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 280 24.749 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 279 7.2E-48 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 SUPERFAMILY SSF63848 174 280 2.35E-32 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 PANTHER PTHR34108 169 282 4.4E-34 T 22-04-2016 RMET_RS00190 9edb728b612c8354506e1151294bb2ab 282 PANTHER PTHR34108 1 135 4.4E-34 T 22-04-2016 RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 PRINTS PR00189 Transthyretin signature 3 23 5.2E-6 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 PRINTS PR00189 Transthyretin signature 95 117 5.2E-6 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 22-04-2016 IPR023418 Transthyretin, thyroxine binding site RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 PANTHER PTHR10395:SF7 1 117 1.1E-44 T 22-04-2016 RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 PANTHER PTHR10395 1 117 1.1E-44 T 22-04-2016 RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 SUPERFAMILY SSF49472 1 117 1.44E-41 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 22-04-2016 IPR023419 Transthyretin, conserved site RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 Pfam PF00576 HIUase/Transthyretin family 4 116 4.0E-35 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 Gene3D G3DSA:2.60.40.180 2 117 1.3E-37 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RMET_RS04460 a3282ecf1113cd53a8e7b151014afe1a 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 4.8E-40 T 22-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 SUPERFAMILY SSF52540 272 488 2.95E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 Gene3D G3DSA:3.40.50.300 9 231 7.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 Pfam PF00005 ABC transporter 25 171 1.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 Pfam PF00005 ABC transporter 275 431 7.2E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 PANTHER PTHR24220:SF239 10 384 6.0E-157 T 22-04-2016 RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 PANTHER PTHR24220 10 384 6.0E-157 T 22-04-2016 RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 Gene3D G3DSA:3.40.50.300 253 492 8.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 SMART SM00382 33 227 8.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03995 fcad17e5d90198ab9e834a93533af1e8 522 SUPERFAMILY SSF52540 9 228 1.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05285 0ddb77b3cc14987e256780a9637ab24f 273 SUPERFAMILY SSF53474 4 265 1.25E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05285 0ddb77b3cc14987e256780a9637ab24f 273 PANTHER PTHR10992 71 267 3.7E-18 T 22-04-2016 RMET_RS05285 0ddb77b3cc14987e256780a9637ab24f 273 Gene3D G3DSA:3.40.50.1820 5 267 8.5E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05285 0ddb77b3cc14987e256780a9637ab24f 273 Pfam PF12697 Alpha/beta hydrolase family 5 258 7.8E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS02615 48ee098e60849de97f6c6284fac643b8 202 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 197 19.689 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RMET_RS02615 48ee098e60849de97f6c6284fac643b8 202 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 198 5.6E-57 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RMET_RS02615 48ee098e60849de97f6c6284fac643b8 202 PANTHER PTHR30309:SF0 1 201 5.3E-67 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RMET_RS02615 48ee098e60849de97f6c6284fac643b8 202 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 188 5.6E-48 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RMET_RS02615 48ee098e60849de97f6c6284fac643b8 202 SMART SM01207 8 189 2.2E-78 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RMET_RS02615 48ee098e60849de97f6c6284fac643b8 202 PANTHER PTHR30309 1 201 5.3E-67 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SMART SM00260 1668 1808 5.5E-12 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Pfam PF00072 Response regulator receiver domain 1856 1967 2.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PANTHER PTHR22617:SF20 1182 1403 5.5E-100 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PANTHER PTHR22617:SF20 1468 1824 5.5E-100 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PANTHER PTHR22617:SF20 8 44 5.5E-100 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:3.40.50.2300 1853 1974 2.2E-36 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SUPERFAMILY SSF55874 1492 1674 6.31E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SUPERFAMILY SSF47226 61 172 1.96E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SMART SM00073 940 1038 0.027 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SMART SM00073 1179 1282 0.021 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SMART SM00073 748 845 1.7E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SMART SM00387 1535 1676 3.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Pfam PF01584 CheW-like domain 1680 1807 1.3E-16 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:1.10.287.560 1356 1409 8.3E-4 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PANTHER PTHR22617 1182 1403 5.5E-100 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PANTHER PTHR22617 1468 1824 5.5E-100 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PANTHER PTHR22617 8 44 5.5E-100 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SMART SM01231 1354 1490 1.2E-4 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1539 1675 4.9E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SMART SM00448 1854 1967 1.2E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Pfam PF01627 Hpt domain 945 1035 5.6E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Pfam PF01627 Hpt domain 750 844 1.2E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Pfam PF01627 Hpt domain 1189 1284 1.6E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SUPERFAMILY SSF47226 1186 1302 3.27E-24 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SUPERFAMILY SSF47226 945 1059 4.45E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:3.30.565.10 1491 1675 1.4E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:1.20.120.160 932 1047 6.0E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:2.30.30.40 1763 1805 1.4E-19 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:2.30.30.40 1676 1697 1.4E-19 T 22-04-2016 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SUPERFAMILY SSF47226 747 870 1.83E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SUPERFAMILY SSF50341 1675 1805 9.81E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1620 1630 4.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1660 1673 4.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1636 1654 4.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1580 1594 4.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 SUPERFAMILY SSF52172 1853 1973 3.84E-35 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:1.20.120.160 80 174 9.9E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:1.20.120.160 1185 1316 6.4E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS03395 c9951f355a4e80568e6d7a093f9929c4 1989 Gene3D G3DSA:1.20.120.160 746 884 1.0E-28 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RMET_RS00265 0c4cf8a76b6d73e7e6e7983aeb14c92a 99 PANTHER PTHR15004 6 99 6.9E-25 T 22-04-2016 RMET_RS00265 0c4cf8a76b6d73e7e6e7983aeb14c92a 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 99 21.734 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RMET_RS00265 0c4cf8a76b6d73e7e6e7983aeb14c92a 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 94 1.6E-17 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RMET_RS00265 0c4cf8a76b6d73e7e6e7983aeb14c92a 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 99 9.3E-30 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RMET_RS00265 0c4cf8a76b6d73e7e6e7983aeb14c92a 99 SUPERFAMILY SSF141000 6 97 7.32E-26 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RMET_RS00265 0c4cf8a76b6d73e7e6e7983aeb14c92a 99 PANTHER PTHR15004:SF0 6 99 6.9E-25 T 22-04-2016 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 PANTHER PTHR14226 195 343 1.5E-106 T 22-04-2016 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 PANTHER PTHR14226 68 162 1.5E-106 T 22-04-2016 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 PANTHER PTHR14226:SF31 195 343 1.5E-106 T 22-04-2016 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 PANTHER PTHR14226:SF31 68 162 1.5E-106 T 22-04-2016 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 Gene3D G3DSA:3.40.1090.10 66 138 1.3E-7 T 22-04-2016 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 Gene3D G3DSA:3.40.1090.10 185 285 1.3E-7 T 22-04-2016 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 Pfam PF12536 Patatin phospholipase 321 425 2.7E-39 T 22-04-2016 IPR021095 Protein of unknown function DUF3734 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 SUPERFAMILY SSF52151 190 413 1.41E-48 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 SUPERFAMILY SSF52151 67 138 1.41E-48 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS00770 8e0869f42edad3bfcc8f371fe9131f75 442 Pfam PF01734 Patatin-like phospholipase 69 285 4.6E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 PANTHER PTHR30126:SF26 10 313 1.4E-100 T 22-04-2016 RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 SUPERFAMILY SSF46785 11 90 1.56E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 SUPERFAMILY SSF53850 95 301 3.57E-37 T 22-04-2016 RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 Gene3D G3DSA:3.40.190.10 98 184 5.8E-18 T 22-04-2016 RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 PANTHER PTHR30126 10 313 1.4E-100 T 22-04-2016 RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 Pfam PF03466 LysR substrate binding domain 95 299 2.0E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.5E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 Gene3D G3DSA:1.10.10.10 10 89 2.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09490 88fd891e2dfa10eedb8423564af682e8 324 Gene3D G3DSA:3.40.190.10 185 267 1.2E-17 T 22-04-2016 RMET_RS01770 0d1b7f638c97d82aaebcc789ae44a500 328 SUPERFAMILY SSF52540 3 227 4.99E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01770 0d1b7f638c97d82aaebcc789ae44a500 328 SMART SM00382 31 210 2.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01770 0d1b7f638c97d82aaebcc789ae44a500 328 Gene3D G3DSA:3.40.50.300 3 226 1.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01770 0d1b7f638c97d82aaebcc789ae44a500 328 Pfam PF00005 ABC transporter 23 164 5.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS01770 0d1b7f638c97d82aaebcc789ae44a500 328 PANTHER PTHR24220 8 240 1.5E-98 T 22-04-2016 RMET_RS01770 0d1b7f638c97d82aaebcc789ae44a500 328 PANTHER PTHR24220:SF0 8 240 1.5E-98 T 22-04-2016 RMET_RS01770 0d1b7f638c97d82aaebcc789ae44a500 328 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 PANTHER PTHR11741 1 289 2.2E-119 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 Gene3D G3DSA:3.30.479.20 233 268 8.9E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 Gene3D G3DSA:3.30.479.20 150 184 8.9E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 SUPERFAMILY SSF54713 56 144 2.22E-25 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 Gene3D G3DSA:1.10.286.20 189 232 1.1E-19 T 22-04-2016 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 SUPERFAMILY SSF46934 3 56 5.0E-13 T 22-04-2016 IPR009060 UBA-like GO:0005515 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 4.5E-93 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 Gene3D G3DSA:3.30.479.20 57 147 2.6E-19 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 Gene3D G3DSA:1.10.8.10 3 55 8.4E-21 T 22-04-2016 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 Pfam PF00889 Elongation factor TS 71 269 1.6E-68 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 78.821 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RMET_RS07235 87b43edc775bbd32a05135943bde3023 292 SUPERFAMILY SSF54713 149 286 1.87E-49 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Gene3D G3DSA:3.40.50.300 287 388 7.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Gene3D G3DSA:3.40.50.300 580 671 7.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Gene3D G3DSA:1.10.10.160 112 184 3.8E-22 T 22-04-2016 IPR013986 DExx box DNA helicase domain RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 PANTHER PTHR11070:SF7 557 671 7.5E-208 T 22-04-2016 RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 PANTHER PTHR11070:SF7 1 508 7.5E-208 T 22-04-2016 RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Gene3D G3DSA:3.40.50.300 185 286 4.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Gene3D G3DSA:3.40.50.300 2 108 4.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Pfam PF13361 UvrD-like helicase C-terminal domain 278 644 2.6E-70 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 SUPERFAMILY SSF52540 581 668 1.65E-175 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 SUPERFAMILY SSF52540 1 528 1.65E-175 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Gene3D G3DSA:1.10.486.10 551 568 2.4E-42 T 22-04-2016 RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Gene3D G3DSA:1.10.486.10 389 512 2.4E-42 T 22-04-2016 RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 PANTHER PTHR11070 557 671 7.5E-208 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 PANTHER PTHR11070 1 508 7.5E-208 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS13215 4274f49361df4e0f72043ee8cdf95115 787 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 272 1.1E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 Pfam PF02321 Outer membrane efflux protein 84 274 1.2E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 Pfam PF02321 Outer membrane efflux protein 302 482 6.0E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 34 484 1.9E-115 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 SUPERFAMILY SSF56954 21 484 1.05E-106 T 22-04-2016 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 PANTHER PTHR30203:SF15 10 484 2.0E-134 T 22-04-2016 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 PANTHER PTHR30203 10 484 2.0E-134 T 22-04-2016 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 Gene3D G3DSA:1.20.1600.10 162 333 2.9E-95 T 22-04-2016 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 Gene3D G3DSA:1.20.1600.10 371 485 2.9E-95 T 22-04-2016 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 Gene3D G3DSA:1.20.1600.10 73 110 2.9E-95 T 22-04-2016 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 Gene3D G3DSA:2.20.200.10 120 161 7.0E-25 T 22-04-2016 RMET_RS08450 2fd721a2ce65b5f5b9fcacc48672d4d6 516 Gene3D G3DSA:2.20.200.10 334 369 7.0E-25 T 22-04-2016 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 SUPERFAMILY SSF102114 36 336 3.92E-75 T 22-04-2016 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 Pfam PF04055 Radical SAM superfamily 47 216 9.9E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 Pfam PF13394 4Fe-4S single cluster domain 50 159 2.8E-9 T 22-04-2016 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 35 374 6.3E-116 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 34 374 40.842 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 Pfam PF06463 Molybdenum Cofactor Synthesis C 224 350 1.9E-36 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 SMART SM00729 43 256 1.4E-6 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 PANTHER PTHR22960 36 322 1.1E-110 T 22-04-2016 RMET_RS12245 eb8ac7684d1c33687c12b9b83e5e4c0f 374 Gene3D G3DSA:3.20.20.70 36 339 2.4E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 PANTHER PTHR18919:SF110 1 394 3.5E-217 T 22-04-2016 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 SUPERFAMILY SSF53901 6 271 1.11E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 Gene3D G3DSA:3.40.47.10 278 392 2.9E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 Gene3D G3DSA:3.40.47.10 144 196 2.9E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 Pfam PF00108 Thiolase, N-terminal domain 6 264 6.5E-88 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 3.2E-38 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 SUPERFAMILY SSF53901 272 393 8.23E-38 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 8.9E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 PANTHER PTHR18919 1 394 3.5E-217 T 22-04-2016 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 PIRSF PIRSF000429 1 394 1.1E-116 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 Gene3D G3DSA:3.40.47.10 6 125 7.7E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS00545 f51e1c44d0ec64135059c2bc4eed4ad9 394 Gene3D G3DSA:3.40.47.10 197 276 7.7E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 PANTHER PTHR11070:SF19 3 522 6.1E-274 T 22-04-2016 RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 PANTHER PTHR11070:SF19 552 665 6.1E-274 T 22-04-2016 RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Gene3D G3DSA:1.10.10.160 118 188 1.3E-17 T 22-04-2016 IPR013986 DExx box DNA helicase domain RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Gene3D G3DSA:3.40.50.300 575 664 2.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Gene3D G3DSA:3.40.50.300 291 393 2.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Gene3D G3DSA:3.40.50.300 3 114 1.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Gene3D G3DSA:3.40.50.300 189 290 1.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 PANTHER PTHR11070 3 522 6.1E-274 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 PANTHER PTHR11070 552 665 6.1E-274 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 276 2.5E-67 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 3 690 38.319 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 SUPERFAMILY SSF52540 3 526 4.52E-153 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 SUPERFAMILY SSF52540 567 662 4.52E-153 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Pfam PF13361 UvrD-like helicase C-terminal domain 282 641 6.8E-61 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RMET_RS17480 b22d39644606be15b1dc0db921d9c948 695 Gene3D G3DSA:1.10.486.10 394 535 2.8E-35 T 22-04-2016 RMET_RS16085 73a53bc46c0bcca2f17b88ab373a25fa 397 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 139 373 1.7E-11 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal RMET_RS16085 73a53bc46c0bcca2f17b88ab373a25fa 397 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 23 117 8.0E-14 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 RMET_RS16085 73a53bc46c0bcca2f17b88ab373a25fa 397 SUPERFAMILY SSF51735 22 198 1.12E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16085 73a53bc46c0bcca2f17b88ab373a25fa 397 SUPERFAMILY SSF55347 140 394 3.01E-63 T 22-04-2016 RMET_RS16085 73a53bc46c0bcca2f17b88ab373a25fa 397 Gene3D G3DSA:3.30.360.10 144 286 2.5E-19 T 22-04-2016 RMET_RS16085 73a53bc46c0bcca2f17b88ab373a25fa 397 Gene3D G3DSA:3.40.50.720 19 143 2.2E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 SUPERFAMILY SSF50447 453 552 9.15E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 PANTHER PTHR11777 1 874 0.0 T 22-04-2016 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 Pfam PF02272 DHHA1 domain 800 866 1.2E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 695 2.0E-16 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 SUPERFAMILY SSF55681 2 251 7.45E-109 T 22-04-2016 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 205.478 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 Gene3D G3DSA:3.30.930.10 1 247 6.4E-126 T 22-04-2016 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 SUPERFAMILY SSF101353 252 444 1.44E-61 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 PANTHER PTHR11777:SF9 1 874 0.0 T 22-04-2016 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 Pfam PF01411 tRNA synthetases class II (A) 5 554 1.7E-218 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 SMART SM00863 653 695 8.1E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RMET_RS04165 856d6baae1ba3b82de513c8cd607048f 874 SUPERFAMILY SSF55186 552 707 7.72E-49 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RMET_RS16130 d83ce6f10e27020cdd20f4ee9960df58 170 Pfam PF01638 HxlR-like helix-turn-helix 20 105 2.9E-19 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type RMET_RS16130 d83ce6f10e27020cdd20f4ee9960df58 170 Gene3D G3DSA:1.10.10.10 5 107 2.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16130 d83ce6f10e27020cdd20f4ee9960df58 170 PANTHER PTHR33204:SF10 1 161 5.1E-48 T 22-04-2016 RMET_RS16130 d83ce6f10e27020cdd20f4ee9960df58 170 SUPERFAMILY SSF46785 5 145 4.63E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16130 d83ce6f10e27020cdd20f4ee9960df58 170 PANTHER PTHR33204 1 161 5.1E-48 T 22-04-2016 RMET_RS06505 3b202c0dd5f66a9dd9e891a35eaa3ad5 149 Gene3D G3DSA:3.40.30.10 22 102 1.4E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS06505 3b202c0dd5f66a9dd9e891a35eaa3ad5 149 Pfam PF07449 Hydrogenase-1 expression protein HyaE 11 117 8.3E-37 T 22-04-2016 IPR010893 [NiFe]-hydrogenase maturation factor HyaE RMET_RS06505 3b202c0dd5f66a9dd9e891a35eaa3ad5 149 PIRSF PIRSF038934 6 138 5.2E-33 T 22-04-2016 IPR010893 [NiFe]-hydrogenase maturation factor HyaE RMET_RS06505 3b202c0dd5f66a9dd9e891a35eaa3ad5 149 SUPERFAMILY SSF52833 9 133 7.22E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 PANTHER PTHR11624 341 678 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 PANTHER PTHR11624 13 322 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 SUPERFAMILY SSF52922 545 677 8.38E-43 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 SUPERFAMILY SSF52518 15 331 4.53E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 Gene3D G3DSA:3.40.50.920 550 676 3.8E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 Gene3D G3DSA:3.40.50.970 13 331 3.9E-130 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 ProSitePatterns PS00801 Transketolase signature 1. 25 45 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 Gene3D G3DSA:3.40.50.970 340 542 2.1E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 Pfam PF02779 Transketolase, pyrimidine binding domain 366 536 5.3E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 19 346 4.4E-158 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 Pfam PF02780 Transketolase, C-terminal domain 562 668 4.8E-16 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 SMART SM00861 367 537 2.1E-67 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 SUPERFAMILY SSF52518 347 537 2.68E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 TIGRFAM TIGR00232 tktlase_bact: transketolase 19 676 2.3E-287 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 PANTHER PTHR11624:SF1 341 678 0.0 T 22-04-2016 RMET_RS14940 c856e43079936aa2bcb46e3c75c94624 678 PANTHER PTHR11624:SF1 13 322 0.0 T 22-04-2016 RMET_RS00850 28eccf7f5713e3c7314bce342f9a2e63 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 134 1.8E-17 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RMET_RS00850 28eccf7f5713e3c7314bce342f9a2e63 144 Gene3D G3DSA:3.10.129.10 21 138 1.1E-31 T 22-04-2016 IPR029069 HotDog domain RMET_RS00850 28eccf7f5713e3c7314bce342f9a2e63 144 Pfam PF03061 Thioesterase superfamily 54 129 6.7E-14 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS00850 28eccf7f5713e3c7314bce342f9a2e63 144 SUPERFAMILY SSF54637 18 139 2.28E-31 T 22-04-2016 IPR029069 HotDog domain RMET_RS00850 28eccf7f5713e3c7314bce342f9a2e63 144 PANTHER PTHR12418 21 140 3.8E-22 T 22-04-2016 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 Gene3D G3DSA:1.10.10.10 6 84 2.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 PANTHER PTHR30537:SF26 1 294 4.2E-93 T 22-04-2016 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 SUPERFAMILY SSF46785 4 83 1.45E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 SUPERFAMILY SSF53850 93 296 1.61E-36 T 22-04-2016 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 Gene3D G3DSA:3.40.190.10 165 261 7.5E-31 T 22-04-2016 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 Gene3D G3DSA:3.40.190.10 92 130 1.6E-5 T 22-04-2016 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.3E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.3E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.3E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 PANTHER PTHR30537 1 294 4.2E-93 T 22-04-2016 RMET_RS04945 69c594d5374886c2e94d50d5b0ddb978 300 Pfam PF03466 LysR substrate binding domain 91 295 1.7E-33 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS06055 05390cbae6692037cf79138f534fb93a 192 Pfam PF09361 Phasin protein 6 104 3.2E-31 T 22-04-2016 IPR018968 Phasin RMET_RS06055 05390cbae6692037cf79138f534fb93a 192 TIGRFAM TIGR01841 phasin: phasin family protein 26 113 1.4E-28 T 22-04-2016 IPR010127 Phasin, subfamily 1 RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 Pfam PF03796 DnaB-like helicase C terminal domain 196 451 1.6E-118 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 Pfam PF00772 DnaB-like helicase N terminal domain 16 117 6.7E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 SUPERFAMILY SSF48024 14 125 9.02E-38 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 452 1.1E-178 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 SMART SM00382 213 411 5.6E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 Gene3D G3DSA:3.40.50.300 180 453 4.4E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 PANTHER PTHR30153 1 461 1.2E-209 T 22-04-2016 RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 Gene3D G3DSA:1.10.860.10 16 118 2.9E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RMET_RS09900 6c884abe4491dd5705d06b11a48fae37 463 SUPERFAMILY SSF52540 194 444 1.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10860 bb913df3b40a80f2a1440c481ff87d27 622 PANTHER PTHR22674:SF6 212 393 4.3E-15 T 22-04-2016 RMET_RS10860 bb913df3b40a80f2a1440c481ff87d27 622 Gene3D G3DSA:3.40.50.300 177 224 5.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10860 bb913df3b40a80f2a1440c481ff87d27 622 Gene3D G3DSA:3.40.50.300 28 124 5.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10860 bb913df3b40a80f2a1440c481ff87d27 622 PANTHER PTHR22674 212 393 4.3E-15 T 22-04-2016 RMET_RS10860 bb913df3b40a80f2a1440c481ff87d27 622 Pfam PF07693 KAP family P-loop domain 14 390 2.0E-52 T 22-04-2016 IPR011646 KAP family P-loop domain RMET_RS10860 bb913df3b40a80f2a1440c481ff87d27 622 SUPERFAMILY SSF52540 181 297 4.58E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10860 bb913df3b40a80f2a1440c481ff87d27 622 SUPERFAMILY SSF52540 21 94 4.58E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 SMART SM00919 179 416 1.3E-138 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 Gene3D G3DSA:3.40.50.720 177 464 1.7E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 Gene3D G3DSA:3.40.50.10380 23 176 1.4E-54 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 Pfam PF03949 Malic enzyme, NAD binding domain 181 373 1.1E-24 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 Pfam PF00390 Malic enzyme, N-terminal domain 35 167 3.5E-30 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 Gene3D G3DSA:3.40.50.10750 584 741 2.3E-50 T 22-04-2016 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 PANTHER PTHR23406 48 450 6.0E-169 T 22-04-2016 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 SUPERFAMILY SSF53223 26 177 6.76E-55 T 22-04-2016 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 SUPERFAMILY SSF51735 179 468 5.5E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 SUPERFAMILY SSF53659 445 768 3.58E-85 T 22-04-2016 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 PIRSF PIRSF036684 15 773 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 SMART SM01274 34 167 2.6E-82 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RMET_RS04425 e979b3630e7e61cf0db011747f273f08 773 Pfam PF01515 Phosphate acetyl/butaryl transferase 444 766 4.1E-92 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 PANTHER PTHR10909:SF296 3 477 5.7E-226 T 22-04-2016 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 8.5E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 451 1.4E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 158 7.3E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 Gene3D G3DSA:1.10.540.10 39 160 8.2E-18 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 PANTHER PTHR10909 3 477 5.7E-226 T 22-04-2016 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 Gene3D G3DSA:1.20.140.10 270 465 1.3E-53 T 22-04-2016 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 1.9E-13 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 Gene3D G3DSA:2.40.110.10 162 269 1.2E-26 T 22-04-2016 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 SUPERFAMILY SSF47203 288 466 3.87E-52 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 SUPERFAMILY SSF56645 38 293 4.71E-59 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS01950 50b6517ba0933840b2fce80cf4496855 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 591 6.2E-33 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 Gene3D G3DSA:1.10.3810.10 53 214 3.1E-41 T 22-04-2016 RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 PANTHER PTHR32282:SF0 6 690 6.5E-117 T 22-04-2016 RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 626 708 7.2E-24 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 Pfam PF00905 Penicillin binding protein transpeptidase domain 308 559 1.4E-9 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 PANTHER PTHR32282 6 690 6.5E-117 T 22-04-2016 RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 Pfam PF00912 Transglycosylase 55 220 1.4E-43 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 Gene3D G3DSA:3.40.710.10 276 618 6.0E-74 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 28 588 1.3E-177 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 SUPERFAMILY SSF56601 274 602 1.63E-82 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS17730 283963fb13636287cc07e6159ca0ddf8 735 SUPERFAMILY SSF53955 36 208 1.1E-40 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS00760 7ede97626a382eb30991ed57cfc1d0c6 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 247 3.8E-23 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS00760 7ede97626a382eb30991ed57cfc1d0c6 258 Gene3D G3DSA:3.60.10.10 1 255 7.2E-94 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS00760 7ede97626a382eb30991ed57cfc1d0c6 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 252 2.8E-76 T 22-04-2016 RMET_RS00760 7ede97626a382eb30991ed57cfc1d0c6 258 SUPERFAMILY SSF56219 2 255 7.07E-75 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS00760 7ede97626a382eb30991ed57cfc1d0c6 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 254 1.1E-79 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RMET_RS00760 7ede97626a382eb30991ed57cfc1d0c6 258 PANTHER PTHR22748 1 258 8.5E-105 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 SUPERFAMILY SSF50129 1 145 1.38E-37 T 22-04-2016 IPR011032 GroES-like RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 PANTHER PTHR11695 15 333 2.8E-134 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 SUPERFAMILY SSF51735 115 296 2.08E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 334 5.4E-147 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 9.0E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 PANTHER PTHR11695:SF610 15 333 2.8E-134 T 22-04-2016 RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 SMART SM00829 10 332 1.5E-49 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 Gene3D G3DSA:3.90.180.10 1 158 2.6E-39 T 22-04-2016 IPR011032 GroES-like RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 Pfam PF00107 Zinc-binding dehydrogenase 160 286 1.1E-33 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS04645 3e9c7ad12e168c9a7f492c146729514e 334 Gene3D G3DSA:3.40.50.720 159 271 1.1E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14420 a48dc3e8c36f3ca90e123b866c622152 456 Gene3D G3DSA:3.30.70.100 345 430 1.5E-15 T 22-04-2016 RMET_RS14420 a48dc3e8c36f3ca90e123b866c622152 456 Gene3D G3DSA:2.30.30.60 292 339 6.8E-10 T 22-04-2016 RMET_RS14420 a48dc3e8c36f3ca90e123b866c622152 456 Pfam PF00924 Mechanosensitive ion channel 233 432 2.1E-43 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RMET_RS14420 a48dc3e8c36f3ca90e123b866c622152 456 SUPERFAMILY SSF82689 344 443 4.58E-24 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RMET_RS14420 a48dc3e8c36f3ca90e123b866c622152 456 PANTHER PTHR30347 139 446 7.5E-66 T 22-04-2016 RMET_RS14420 a48dc3e8c36f3ca90e123b866c622152 456 SUPERFAMILY SSF82861 191 274 1.31E-10 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RMET_RS14420 a48dc3e8c36f3ca90e123b866c622152 456 PANTHER PTHR30347:SF3 139 446 7.5E-66 T 22-04-2016 RMET_RS14420 a48dc3e8c36f3ca90e123b866c622152 456 SUPERFAMILY SSF50182 276 340 2.55E-12 T 22-04-2016 IPR010920 LSM domain RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 PANTHER PTHR10947:SF0 2 814 1.0E-254 T 22-04-2016 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 PANTHER PTHR10947 2 814 1.0E-254 T 22-04-2016 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 SUPERFAMILY SSF56037 202 398 5.23E-69 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 808 43.485 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Gene3D G3DSA:3.30.56.20 407 484 5.4E-25 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 SUPERFAMILY SSF54991 707 814 3.53E-20 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 814 2.5E-227 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Gene3D G3DSA:2.40.50.140 43 161 1.5E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 SUPERFAMILY SSF50249 37 205 1.03E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Gene3D G3DSA:3.50.40.10 205 398 6.9E-77 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 SUPERFAMILY SSF46955 409 484 8.33E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Pfam PF01588 Putative tRNA binding domain 46 152 7.3E-23 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Pfam PF03483 B3/4 domain 220 392 5.9E-62 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Gene3D G3DSA:3.30.930.10 501 700 3.2E-61 T 22-04-2016 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 SMART SM00896 712 814 3.4E-29 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Gene3D G3DSA:3.30.56.10 162 191 1.3E-22 T 22-04-2016 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Gene3D G3DSA:3.30.56.10 1 39 1.3E-22 T 22-04-2016 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 SUPERFAMILY SSF55681 476 700 3.38E-49 T 22-04-2016 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Gene3D G3DSA:3.30.70.380 714 814 9.8E-23 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Pfam PF03147 Ferredoxin-fold anticodon binding domain 712 814 1.6E-21 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 SMART SM00874 408 480 1.1E-28 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 SMART SM00873 219 392 1.9E-81 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RMET_RS05865 b027be67bc00311619fb7e70e51dc960 815 Pfam PF03484 tRNA synthetase B5 domain 411 480 1.1E-19 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RMET_RS13885 023f1a4cf7ad20fb116751e4699759ca 362 SUPERFAMILY SSF117916 3 85 1.96E-19 T 22-04-2016 RMET_RS13885 023f1a4cf7ad20fb116751e4699759ca 362 Gene3D G3DSA:3.40.50.300 93 339 2.1E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13885 023f1a4cf7ad20fb116751e4699759ca 362 SUPERFAMILY SSF52540 89 324 7.72E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13885 023f1a4cf7ad20fb116751e4699759ca 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 RMET_RS13885 023f1a4cf7ad20fb116751e4699759ca 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 38.036 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RMET_RS13885 023f1a4cf7ad20fb116751e4699759ca 362 Pfam PF01883 Domain of unknown function DUF59 6 76 2.7E-23 T 22-04-2016 IPR002744 Domain of unknown function DUF59 RMET_RS13885 023f1a4cf7ad20fb116751e4699759ca 362 PANTHER PTHR23264 1 355 9.9E-164 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RMET_RS13885 023f1a4cf7ad20fb116751e4699759ca 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 339 1.4E-103 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 Gene3D G3DSA:1.10.8.60 502 586 4.7E-33 T 22-04-2016 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 Hamap MF_01973 Lon protease [lon]. 14 774 71.632 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 SUPERFAMILY SSF88697 13 204 2.98E-53 T 22-04-2016 IPR015947 PUA-like domain RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 203 3.5E-44 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 SUPERFAMILY SSF54211 597 772 1.9E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 SUPERFAMILY SSF52540 314 588 1.44E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 PIRSF PIRSF001174 4 777 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 TIGRFAM TIGR00763 lon: endopeptidase La 15 773 6.7E-303 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 Gene3D G3DSA:3.30.230.10 593 773 3.9E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 Gene3D G3DSA:3.40.50.300 313 501 5.4E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 571 774 4.0E-98 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 PANTHER PTHR10046:SF43 11 778 0.0 T 22-04-2016 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 SMART SM00464 13 205 2.1E-78 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 PANTHER PTHR10046 11 778 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 5.4E-56 T 22-04-2016 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 5.4E-56 T 22-04-2016 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 5.4E-56 T 22-04-2016 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 5.4E-56 T 22-04-2016 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 5.4E-56 T 22-04-2016 RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 SMART SM00382 350 494 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09440 856375378f356080d1c0143f5245e1ab 803 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 1.7E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS03390 60ef5658a9196ca46c97c11f5dcf0e7c 733 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 525 730 9.8E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RMET_RS03390 60ef5658a9196ca46c97c11f5dcf0e7c 733 PANTHER PTHR32089:SF43 438 733 1.3E-92 T 22-04-2016 RMET_RS03390 60ef5658a9196ca46c97c11f5dcf0e7c 733 PANTHER PTHR32089 438 733 1.3E-92 T 22-04-2016 RMET_RS03390 60ef5658a9196ca46c97c11f5dcf0e7c 733 Gene3D G3DSA:1.10.287.950 484 702 4.0E-48 T 22-04-2016 RMET_RS03390 60ef5658a9196ca46c97c11f5dcf0e7c 733 SMART SM00283 470 731 5.4E-77 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RMET_RS03390 60ef5658a9196ca46c97c11f5dcf0e7c 733 SUPERFAMILY SSF58104 430 732 4.62E-64 T 22-04-2016 RMET_RS03390 60ef5658a9196ca46c97c11f5dcf0e7c 733 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 220 310 4.9E-6 T 22-04-2016 IPR029095 NarX-like, N-terminal RMET_RS03390 60ef5658a9196ca46c97c11f5dcf0e7c 733 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 85 189 7.9E-16 T 22-04-2016 IPR029095 NarX-like, N-terminal RMET_RS06110 c5b4e0ef8be05c055b0f3222ce829b60 323 Pfam PF04392 ABC transporter substrate binding protein 31 321 2.5E-106 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein RMET_RS06110 c5b4e0ef8be05c055b0f3222ce829b60 323 PANTHER PTHR35271 1 323 3.2E-70 T 22-04-2016 RMET_RS06110 c5b4e0ef8be05c055b0f3222ce829b60 323 Gene3D G3DSA:3.40.50.2300 30 156 2.9E-55 T 22-04-2016 RMET_RS06110 c5b4e0ef8be05c055b0f3222ce829b60 323 Gene3D G3DSA:3.40.50.2300 157 287 5.0E-51 T 22-04-2016 RMET_RS06110 c5b4e0ef8be05c055b0f3222ce829b60 323 SUPERFAMILY SSF53822 37 286 3.05E-17 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 360 6.0E-67 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 PIRSF PIRSF019169 2 361 3.9E-93 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 PANTHER PTHR32432 2 361 6.1E-33 T 22-04-2016 RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 SMART SM00842 14 181 7.4E-5 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 Pfam PF11104 Type IV pilus assembly protein PilM; 16 359 4.5E-105 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 Gene3D G3DSA:3.30.420.40 202 326 1.2E-10 T 22-04-2016 RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 PANTHER PTHR32432:SF3 2 361 6.1E-33 T 22-04-2016 RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 SUPERFAMILY SSF53067 201 359 7.07E-12 T 22-04-2016 RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 SUPERFAMILY SSF53067 14 180 1.81E-15 T 22-04-2016 RMET_RS16410 0a8f44840d3eb37def808d8da0d95c9c 361 Gene3D G3DSA:3.30.420.40 13 105 4.7E-7 T 22-04-2016 RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 SUPERFAMILY SSF51338 9 67 8.64E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 SUPERFAMILY SSF51338 380 455 8.64E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 SUPERFAMILY SSF51556 67 380 2.54E-95 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 Gene3D G3DSA:3.20.20.140 76 365 1.1E-100 T 22-04-2016 RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 PANTHER PTHR11271 11 456 3.5E-184 T 22-04-2016 RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 PANTHER PTHR11271:SF37 11 456 3.5E-184 T 22-04-2016 RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 Pfam PF01979 Amidohydrolase family 64 429 4.4E-62 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 Gene3D G3DSA:2.30.40.10 1 75 1.5E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS05980 1d835f350bd15244bb1fdcfd60f10ba6 463 Gene3D G3DSA:2.30.40.10 366 437 3.0E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS14355 477adae50cef38a4cf0e500016a36bd2 238 SMART SM00382 30 217 2.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS14355 477adae50cef38a4cf0e500016a36bd2 238 Gene3D G3DSA:3.40.50.300 2 235 5.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14355 477adae50cef38a4cf0e500016a36bd2 238 SUPERFAMILY SSF52540 4 236 1.36E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14355 477adae50cef38a4cf0e500016a36bd2 238 PANTHER PTHR24220 7 238 4.1E-123 T 22-04-2016 RMET_RS14355 477adae50cef38a4cf0e500016a36bd2 238 Pfam PF00005 ABC transporter 22 166 2.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS14355 477adae50cef38a4cf0e500016a36bd2 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS14355 477adae50cef38a4cf0e500016a36bd2 238 PANTHER PTHR24220:SF568 7 238 4.1E-123 T 22-04-2016 RMET_RS14355 477adae50cef38a4cf0e500016a36bd2 238 PIRSF PIRSF039137 1 238 1.9E-108 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 Gene3D G3DSA:1.20.1250.20 5 204 6.0E-12 T 22-04-2016 RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 PANTHER PTHR23513 331 426 1.4E-79 T 22-04-2016 RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 PANTHER PTHR23513 1 147 1.4E-79 T 22-04-2016 RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 PANTHER PTHR23513 164 313 1.4E-79 T 22-04-2016 RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 SUPERFAMILY SSF103473 5 423 2.22E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 Pfam PF07690 Major Facilitator Superfamily 9 359 1.2E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 PANTHER PTHR23513:SF8 331 426 1.4E-79 T 22-04-2016 RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 PANTHER PTHR23513:SF8 1 147 1.4E-79 T 22-04-2016 RMET_RS07050 0da462f26a61d099d9b9dbb1d1d25802 439 PANTHER PTHR23513:SF8 164 313 1.4E-79 T 22-04-2016 RMET_RS17100 33258cb906c6e1076c7520215c8eec0e 208 Gene3D G3DSA:1.10.340.30 12 194 8.9E-76 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RMET_RS17100 33258cb906c6e1076c7520215c8eec0e 208 PANTHER PTHR30037:SF4 1 208 5.4E-94 T 22-04-2016 RMET_RS17100 33258cb906c6e1076c7520215c8eec0e 208 Pfam PF03352 Methyladenine glycosylase 16 192 5.0E-72 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 RMET_RS17100 33258cb906c6e1076c7520215c8eec0e 208 SUPERFAMILY SSF48150 12 197 2.12E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RMET_RS17100 33258cb906c6e1076c7520215c8eec0e 208 PANTHER PTHR30037 1 208 5.4E-94 T 22-04-2016 RMET_RS01610 772990014b9f714bdb702bdd2bb72167 398 Gene3D G3DSA:1.10.443.10 172 367 5.1E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS01610 772990014b9f714bdb702bdd2bb72167 398 Pfam PF00589 Phage integrase family 173 369 1.7E-13 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS01610 772990014b9f714bdb702bdd2bb72167 398 SUPERFAMILY SSF56349 168 371 5.0E-22 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.3E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 PANTHER PTHR26402:SF50 5 234 4.8E-86 T 22-04-2016 RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 Gene3D G3DSA:3.40.50.2300 2 124 8.1E-39 T 22-04-2016 RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 SUPERFAMILY SSF52172 4 127 1.57E-38 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 SMART SM00862 155 231 2.4E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 PANTHER PTHR26402 5 234 4.8E-86 T 22-04-2016 RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 Gene3D G3DSA:1.10.10.10 136 234 2.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 SUPERFAMILY SSF46894 130 233 1.04E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 SMART SM00448 5 116 6.8E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS05910 ba90c5b9fea35498b58b7aea83673d75 247 Pfam PF00072 Response regulator receiver domain 7 116 9.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 Gene3D G3DSA:3.20.20.70 1 293 4.3E-121 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 288 1.1E-109 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 67.987 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 2.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 2.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 PANTHER PTHR12128 2 293 2.3E-134 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 3.9E-101 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 SMART SM01130 3 291 2.4E-145 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 SUPERFAMILY SSF51569 2 293 1.78E-105 T 22-04-2016 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 PANTHER PTHR12128:SF34 2 293 2.3E-134 T 22-04-2016 RMET_RS05370 41d292feb1423d37b4bbc2eb77e33234 294 PIRSF PIRSF001365 1 293 1.6E-93 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS03530 47c9e2b345379f7bbe394cd604ade328 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 271 2.4E-44 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS03530 47c9e2b345379f7bbe394cd604ade328 302 PANTHER PTHR30085 11 300 9.1E-114 T 22-04-2016 RMET_RS03530 47c9e2b345379f7bbe394cd604ade328 302 SUPERFAMILY SSF53850 14 274 1.03E-60 T 22-04-2016 RMET_RS03530 47c9e2b345379f7bbe394cd604ade328 302 Gene3D G3DSA:3.40.190.10 128 233 7.7E-26 T 22-04-2016 RMET_RS03530 47c9e2b345379f7bbe394cd604ade328 302 Gene3D G3DSA:3.40.190.10 234 275 8.7E-26 T 22-04-2016 RMET_RS03530 47c9e2b345379f7bbe394cd604ade328 302 Gene3D G3DSA:3.40.190.10 40 127 8.7E-26 T 22-04-2016 RMET_RS03530 47c9e2b345379f7bbe394cd604ade328 302 PANTHER PTHR30085:SF2 11 300 9.1E-114 T 22-04-2016 RMET_RS03530 47c9e2b345379f7bbe394cd604ade328 302 SMART SM00062 43 273 7.3E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 Pfam PF02541 Ppx/GppA phosphatase family 41 315 2.7E-68 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 SUPERFAMILY SSF109604 321 507 8.16E-40 T 22-04-2016 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 314 2.4E-95 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 SUPERFAMILY SSF53067 7 134 4.4E-30 T 22-04-2016 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 Gene3D G3DSA:3.30.420.150 140 319 6.6E-52 T 22-04-2016 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 PANTHER PTHR30005 1 508 5.8E-133 T 22-04-2016 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 Gene3D G3DSA:3.30.420.40 2 135 2.0E-40 T 22-04-2016 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 PIRSF PIRSF001267 1 510 9.0E-192 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 SUPERFAMILY SSF53067 141 318 1.65E-41 T 22-04-2016 RMET_RS10930 b4dd667e72b6456f93191bf33b8963e9 510 PANTHER PTHR30005:SF4 1 508 5.8E-133 T 22-04-2016 RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 PANTHER PTHR11935 234 470 3.5E-174 T 22-04-2016 RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 PANTHER PTHR11935 73 210 3.5E-174 T 22-04-2016 RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 Pfam PF14864 Alkyl sulfatase C-terminal 530 652 3.9E-40 T 22-04-2016 IPR029229 Alkyl sulfatase, C-terminal RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 PANTHER PTHR11935:SF93 234 470 3.5E-174 T 22-04-2016 RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 PANTHER PTHR11935:SF93 73 210 3.5E-174 T 22-04-2016 RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 Gene3D G3DSA:3.60.15.10 248 367 1.7E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 Gene3D G3DSA:3.60.15.10 88 212 1.7E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 Gene3D G3DSA:3.30.1050.10 537 641 6.4E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 Pfam PF00753 Metallo-beta-lactamase superfamily 118 344 8.2E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 SUPERFAMILY SSF56281 23 523 8.54E-155 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 SMART SM00849 122 344 3.3E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 SUPERFAMILY SSF55718 531 652 3.53E-35 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RMET_RS10790 7fde6f03be49e0778712ba84820a06f9 657 Pfam PF14863 Alkyl sulfatase dimerisation 381 520 3.4E-61 T 22-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 RMET_RS03200 e75f54c9b454c8bf97d99cfd1cad8b28 523 PANTHER PTHR37024:SF1 19 518 6.1E-82 T 22-04-2016 RMET_RS03200 e75f54c9b454c8bf97d99cfd1cad8b28 523 Pfam PF06812 ImpA, N-terminal, type VI secretion system 30 135 3.9E-17 T 22-04-2016 IPR010657 ImpA, N-terminal RMET_RS03200 e75f54c9b454c8bf97d99cfd1cad8b28 523 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 219 482 7.2E-84 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 RMET_RS03200 e75f54c9b454c8bf97d99cfd1cad8b28 523 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 25 481 1.4E-121 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 RMET_RS03200 e75f54c9b454c8bf97d99cfd1cad8b28 523 PANTHER PTHR37024 19 518 6.1E-82 T 22-04-2016 RMET_RS10360 2fc7ab24337539558d54c0af535a681e 91 PANTHER PTHR36965 2 91 2.2E-42 T 22-04-2016 RMET_RS10360 2fc7ab24337539558d54c0af535a681e 91 PANTHER PTHR36965:SF1 2 91 2.2E-42 T 22-04-2016 RMET_RS10360 2fc7ab24337539558d54c0af535a681e 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.978 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RMET_RS10360 2fc7ab24337539558d54c0af535a681e 91 SUPERFAMILY SSF111148 1 89 2.22E-40 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RMET_RS10360 2fc7ab24337539558d54c0af535a681e 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 1.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RMET_RS10360 2fc7ab24337539558d54c0af535a681e 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.4E-44 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RMET_RS10360 2fc7ab24337539558d54c0af535a681e 91 Gene3D G3DSA:1.10.3880.10 1 89 4.7E-42 T 22-04-2016 RMET_RS10360 2fc7ab24337539558d54c0af535a681e 91 PIRSF PIRSF029827 1 90 4.4E-41 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 SMART SM00963 1 86 2.7E-27 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 PANTHER PTHR11564:SF7 1 443 4.3E-244 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 447 33.035 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 Gene3D G3DSA:3.40.50.300 101 304 8.6E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 PANTHER PTHR11564 1 443 4.3E-244 T 22-04-2016 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 276 289 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 SUPERFAMILY SSF52540 42 365 8.18E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 Gene3D G3DSA:1.20.120.140 2 89 2.0E-30 T 22-04-2016 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 437 3.1E-173 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 Pfam PF00448 SRP54-type protein, GTPase domain 107 303 3.2E-72 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 SUPERFAMILY SSF47446 336 438 2.62E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.3E-16 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 SMART SM00382 106 308 7.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 SMART SM00962 107 303 6.7E-119 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 Pfam PF02978 Signal peptide binding domain 336 435 3.2E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RMET_RS15490 9b61849715a665e2430b725a6b57d7c7 463 Gene3D G3DSA:1.10.260.30 336 439 1.2E-37 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 PANTHER PTHR12338:SF6 1 28 2.2E-30 T 22-04-2016 RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 PANTHER PTHR12338:SF6 51 308 2.2E-30 T 22-04-2016 RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 PANTHER PTHR12338:SF6 332 367 2.2E-30 T 22-04-2016 RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 PANTHER PTHR12338 332 367 2.2E-30 T 22-04-2016 RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 SUPERFAMILY SSF51126 711 1047 6.7E-9 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Pfam PF13018 Extended Signal Peptide of Type V secretion system 2 23 1.5E-6 T 22-04-2016 IPR024973 ESPR domain RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 SUPERFAMILY SSF51126 978 1382 6.12E-50 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1002 1032 4.5E-10 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1100 1131 1.3E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1191 1221 3.0E-11 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 SMART SM00912 73 182 1.2E-21 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 SMART SM00869 1466 1726 1.6E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Gene3D G3DSA:2.40.128.130 1407 1741 6.0E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 SUPERFAMILY SSF103515 1427 1741 2.09E-40 T 22-04-2016 IPR005546 Autotransporter beta-domain RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 SUPERFAMILY SSF51126 81 342 1.88E-21 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Pfam PF12951 Passenger-associated-transport-repeat 1102 1127 1.5E-7 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Pfam PF12951 Passenger-associated-transport-repeat 629 655 0.069 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Pfam PF12951 Passenger-associated-transport-repeat 1191 1219 1.3E-9 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Pfam PF12951 Passenger-associated-transport-repeat 1003 1032 1.7E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Gene3D G3DSA:2.160.20.20 953 1138 3.3E-14 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Gene3D G3DSA:2.160.20.20 1139 1400 4.7E-35 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 Pfam PF03797 Autotransporter beta-domain 1465 1716 4.7E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 PANTHER PTHR12338 51 308 2.2E-30 T 22-04-2016 RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 PANTHER PTHR12338 1 28 2.2E-30 T 22-04-2016 RMET_RS03100 d4b2b65fb22dc4335a96b9a3b3cdc393 1741 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1264 1741 8.6E-64 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 RMET_RS06215 bf4b5b694939168c68ef1e99bf6959ed 632 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 12 632 34.677 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup RMET_RS06215 bf4b5b694939168c68ef1e99bf6959ed 632 Pfam PF02705 K+ potassium transporter 21 553 3.2E-214 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 RMET_RS06215 bf4b5b694939168c68ef1e99bf6959ed 632 PANTHER PTHR30540:SF7 23 558 1.8E-237 T 22-04-2016 RMET_RS06215 bf4b5b694939168c68ef1e99bf6959ed 632 PANTHER PTHR30540 23 558 1.8E-237 T 22-04-2016 RMET_RS02460 ecd065ef2f91e91a6954d2979c9a731e 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.839 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 RMET_RS02460 ecd065ef2f91e91a6954d2979c9a731e 159 Pfam PF01967 MoaC family 15 150 2.4E-53 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RMET_RS02460 ecd065ef2f91e91a6954d2979c9a731e 159 SUPERFAMILY SSF55040 11 155 1.24E-59 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RMET_RS02460 ecd065ef2f91e91a6954d2979c9a731e 159 Gene3D G3DSA:3.30.70.640 3 157 7.3E-68 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RMET_RS02460 ecd065ef2f91e91a6954d2979c9a731e 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 8.3E-59 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 RMET_RS02460 ecd065ef2f91e91a6954d2979c9a731e 159 PANTHER PTHR22960 1 158 1.1E-87 T 22-04-2016 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 509 7.2E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 SUPERFAMILY SSF142984 340 421 1.29E-19 T 22-04-2016 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 439 450 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 Gene3D G3DSA:3.40.30.10 9 83 1.2E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 SUPERFAMILY SSF142019 97 337 5.1E-85 T 22-04-2016 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 SMART SM00928 426 471 6.4E-19 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 SUPERFAMILY SSF52833 3 84 6.71E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 SUPERFAMILY SSF140490 423 508 5.75E-28 T 22-04-2016 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 146 316 2.7E-45 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 PANTHER PTHR11780:SF0 2 508 9.4E-233 T 22-04-2016 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 264 279 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RMET_RS02800 ed3654173be6c7a1913d39ea641f8620 518 PANTHER PTHR11780 2 508 9.4E-233 T 22-04-2016 RMET_RS08840 9936c5b4e5df5aeecc3f8b5fd88e1ac7 132 Pfam PF08818 Domain of unknown function (DU1801) 29 123 2.3E-19 T 22-04-2016 IPR014922 Domain of unknown function DUF1801 RMET_RS08840 9936c5b4e5df5aeecc3f8b5fd88e1ac7 132 SUPERFAMILY SSF159888 20 127 8.11E-17 T 22-04-2016 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 446 6.9E-164 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 SUPERFAMILY SSF143968 338 500 1.31E-65 T 22-04-2016 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 PANTHER PTHR30108 1 507 2.6E-238 T 22-04-2016 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 502 71.445 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 PANTHER PTHR30108:SF1 1 507 2.6E-238 T 22-04-2016 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 Gene3D G3DSA:3.40.1670.10 352 468 8.1E-54 T 22-04-2016 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 Gene3D G3DSA:1.20.5.570 470 500 2.9E-15 T 22-04-2016 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 SUPERFAMILY SSF50475 3 337 2.04E-112 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS13545 f859ca17d438c14557be4f51e14f68e1 507 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 470 1.7E-157 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RMET_RS02835 ae4e3b031643292b479e6105cc5f0b37 254 PANTHER PTHR31126 120 254 6.8E-37 T 22-04-2016 RMET_RS02835 ae4e3b031643292b479e6105cc5f0b37 254 PANTHER PTHR31126 9 92 6.8E-37 T 22-04-2016 RMET_RS02835 ae4e3b031643292b479e6105cc5f0b37 254 Gene3D G3DSA:3.90.190.10 15 184 3.0E-15 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RMET_RS02835 ae4e3b031643292b479e6105cc5f0b37 254 SUPERFAMILY SSF52799 13 245 9.32E-47 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RMET_RS02835 ae4e3b031643292b479e6105cc5f0b37 254 PANTHER PTHR31126:SF21 120 254 6.8E-37 T 22-04-2016 RMET_RS02835 ae4e3b031643292b479e6105cc5f0b37 254 PANTHER PTHR31126:SF21 9 92 6.8E-37 T 22-04-2016 RMET_RS02835 ae4e3b031643292b479e6105cc5f0b37 254 Pfam PF13350 Tyrosine phosphatase family 15 247 1.5E-57 T 22-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 262 5.2E-44 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 PIRSF PIRSF000161 1 265 1.6E-85 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 4.6E-37 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 263 34.459 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 PANTHER PTHR20836 1 264 5.1E-93 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 SUPERFAMILY SSF55347 125 234 1.13E-37 T 22-04-2016 RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 7.7E-97 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 SUPERFAMILY SSF51735 234 264 2.09E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 SUPERFAMILY SSF51735 1 124 2.09E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14910 19a8167db304e4b93d79163b3fcfb97b 265 Gene3D G3DSA:3.40.50.720 1 161 1.1E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 Gene3D G3DSA:2.40.50.230 385 466 1.4E-16 T 22-04-2016 IPR006531 Gp5 N-terminal RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 PANTHER PTHR32305:SF7 82 746 5.9E-36 T 22-04-2016 RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 39 512 3.9E-61 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 488 590 5.8E-36 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 Gene3D G3DSA:3.55.50.10 120 213 3.4E-24 T 22-04-2016 RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 609 755 1.0E-49 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 PANTHER PTHR32305 82 746 5.9E-36 T 22-04-2016 RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 SUPERFAMILY SSF69279 31 209 5.1E-41 T 22-04-2016 RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 SUPERFAMILY SSF69255 377 466 5.75E-19 T 22-04-2016 RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 SUPERFAMILY SSF69279 211 372 2.21E-39 T 22-04-2016 RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 44 513 1.0E-70 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RMET_RS03160 379132e9c912329098c6f80d0ded4aa1 889 Pfam PF05954 Phage late control gene D protein (GPD) 52 351 1.1E-52 T 22-04-2016 RMET_RS04565 20b45c526ff5a4f91bfe4acec7ec9204 344 Pfam PF12697 Alpha/beta hydrolase family 130 322 1.6E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS04565 20b45c526ff5a4f91bfe4acec7ec9204 344 SUPERFAMILY SSF53474 125 312 4.05E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS04565 20b45c526ff5a4f91bfe4acec7ec9204 344 Gene3D G3DSA:3.40.50.1820 127 318 6.9E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS03240 a434c05995890a4db98e92e9475b6d07 397 Gene3D G3DSA:3.40.50.300 130 370 2.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03240 a434c05995890a4db98e92e9475b6d07 397 PANTHER PTHR13696 70 381 5.5E-34 T 22-04-2016 RMET_RS03240 a434c05995890a4db98e92e9475b6d07 397 Pfam PF00072 Response regulator receiver domain 4 116 2.2E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS03240 a434c05995890a4db98e92e9475b6d07 397 Gene3D G3DSA:3.40.50.2300 2 122 4.1E-12 T 22-04-2016 RMET_RS03240 a434c05995890a4db98e92e9475b6d07 397 SUPERFAMILY SSF52172 1 128 2.99E-12 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS03240 a434c05995890a4db98e92e9475b6d07 397 SUPERFAMILY SSF52540 132 369 4.93E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03240 a434c05995890a4db98e92e9475b6d07 397 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 134 318 3.8E-16 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RMET_RS08830 05798565240d441bfad5d00f34b58c0a 144 Gene3D G3DSA:3.10.450.50 9 119 1.1E-15 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS08830 05798565240d441bfad5d00f34b58c0a 144 SUPERFAMILY SSF54427 8 123 2.74E-19 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS08830 05798565240d441bfad5d00f34b58c0a 144 Pfam PF12680 SnoaL-like domain 16 111 7.3E-8 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 115 332 2.7E-41 T 22-04-2016 IPR000477 Reverse transcriptase domain RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 Pfam PF13655 N-terminal domain of reverse transcriptase 19 100 3.1E-29 T 22-04-2016 IPR025960 Reverse transcriptase, N-terminal domain RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 SUPERFAMILY SSF56672 79 400 2.08E-48 T 22-04-2016 RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 Pfam PF08388 Group II intron, maturase-specific domain 349 426 5.4E-22 T 22-04-2016 IPR013597 Group II intron, maturase-specific RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 Pfam PF01844 HNH endonuclease 510 555 1.5E-6 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 63 413 1.5E-110 T 22-04-2016 IPR030931 Group II intron reverse transcriptase/maturase RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 PANTHER PTHR19446 99 364 2.5E-72 T 22-04-2016 RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 PANTHER PTHR19446:SF383 99 364 2.5E-72 T 22-04-2016 RMET_RS01290 60fa207162e851b55f2230392b4fb6c4 571 SMART SM00507 499 551 2.7E-7 T 22-04-2016 IPR003615 HNH nuclease RMET_RS03900 e9847b65dfd55f40c3541f6d913df417 418 PANTHER PTHR23502 26 413 2.3E-82 T 22-04-2016 RMET_RS03900 e9847b65dfd55f40c3541f6d913df417 418 Gene3D G3DSA:1.20.1250.20 31 205 3.6E-27 T 22-04-2016 RMET_RS03900 e9847b65dfd55f40c3541f6d913df417 418 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 29 405 1.2E-61 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RMET_RS03900 e9847b65dfd55f40c3541f6d913df417 418 SUPERFAMILY SSF103473 27 410 8.37E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS03900 e9847b65dfd55f40c3541f6d913df417 418 Gene3D G3DSA:1.20.1250.20 226 403 2.2E-14 T 22-04-2016 RMET_RS03900 e9847b65dfd55f40c3541f6d913df417 418 Pfam PF07690 Major Facilitator Superfamily 35 374 1.8E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS03900 e9847b65dfd55f40c3541f6d913df417 418 PANTHER PTHR23502:SF19 26 413 2.3E-82 T 22-04-2016 RMET_RS09210 1120c989d440e6ec39bddb5137b091ae 323 SUPERFAMILY SSF51735 1 317 3.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09210 1120c989d440e6ec39bddb5137b091ae 323 PANTHER PTHR10366 2 318 6.3E-81 T 22-04-2016 RMET_RS09210 1120c989d440e6ec39bddb5137b091ae 323 Gene3D G3DSA:3.40.50.720 1 177 4.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09210 1120c989d440e6ec39bddb5137b091ae 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 198 2.8E-22 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RMET_RS09210 1120c989d440e6ec39bddb5137b091ae 323 PANTHER PTHR10366:SF228 2 318 6.3E-81 T 22-04-2016 RMET_RS09210 1120c989d440e6ec39bddb5137b091ae 323 Gene3D G3DSA:3.90.25.10 178 301 1.1E-38 T 22-04-2016 RMET_RS09675 c64e079da55d4d54c248673a27d039cf 261 Pfam PF09339 IclR helix-turn-helix domain 16 66 3.5E-15 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS09675 c64e079da55d4d54c248673a27d039cf 261 SUPERFAMILY SSF46785 15 86 3.86E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09675 c64e079da55d4d54c248673a27d039cf 261 Gene3D G3DSA:3.30.450.40 89 259 1.1E-46 T 22-04-2016 IPR029016 GAF domain-like RMET_RS09675 c64e079da55d4d54c248673a27d039cf 261 Pfam PF01614 Bacterial transcriptional regulator 132 257 7.8E-27 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS09675 c64e079da55d4d54c248673a27d039cf 261 Gene3D G3DSA:1.10.10.10 7 85 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09675 c64e079da55d4d54c248673a27d039cf 261 SUPERFAMILY SSF55781 80 259 7.19E-44 T 22-04-2016 IPR029016 GAF domain-like RMET_RS09675 c64e079da55d4d54c248673a27d039cf 261 SMART SM00346 14 104 2.2E-29 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS09675 c64e079da55d4d54c248673a27d039cf 261 PANTHER PTHR30136 10 261 1.5E-60 T 22-04-2016 RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 Hamap MF_00970 Ribonuclease E [rne]. 1 1012 35.694 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 Gene3D G3DSA:2.40.50.140 31 124 1.1E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 Pfam PF10150 Ribonuclease E/G family 120 389 1.9E-93 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 PANTHER PTHR30001:SF1 1 823 0.0 T 22-04-2016 RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 PANTHER PTHR30001 1 823 0.0 T 22-04-2016 RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 SUPERFAMILY SSF50249 39 124 9.95E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 SMART SM00316 37 118 5.8E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.0E-159 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RMET_RS12240 2491ca18ab0922b858f54a582c060f58 1037 Pfam PF00575 S1 RNA binding domain 36 117 1.4E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS14390 318abbe479af8fcef049359d62db3347 77 Pfam PF00830 Ribosomal L28 family 3 62 3.7E-27 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RMET_RS14390 318abbe479af8fcef049359d62db3347 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 2.2E-27 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14390 318abbe479af8fcef049359d62db3347 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.185 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14390 318abbe479af8fcef049359d62db3347 77 Gene3D G3DSA:2.30.170.40 2 76 6.8E-37 T 22-04-2016 RMET_RS14390 318abbe479af8fcef049359d62db3347 77 SUPERFAMILY SSF143800 1 76 2.16E-30 T 22-04-2016 RMET_RS14390 318abbe479af8fcef049359d62db3347 77 PANTHER PTHR13528 1 69 2.0E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PANTHER PTHR30050:SF2 1 103 8.7E-192 T 22-04-2016 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PANTHER PTHR30050:SF2 242 579 8.7E-192 T 22-04-2016 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 Gene3D G3DSA:3.40.50.300 234 408 6.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 227 577 3.4E-157 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 Gene3D G3DSA:1.10.8.60 410 477 9.1E-29 T 22-04-2016 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PANTHER PTHR30050 1 103 8.7E-192 T 22-04-2016 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PANTHER PTHR30050 242 579 8.7E-192 T 22-04-2016 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 Pfam PF11638 DnaA N-terminal domain 3 65 1.4E-17 T 22-04-2016 IPR024633 DnaA N-terminal domain RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 SUPERFAMILY SSF48295 475 578 1.83E-37 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 ProSitePatterns PS01008 DnaA protein signature. 537 556 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 SUPERFAMILY SSF52540 243 455 2.04E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 Gene3D G3DSA:1.10.1750.10 478 578 1.3E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 SMART SM00760 487 556 1.2E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 578 32.085 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 488 556 2.5E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 SMART SM00382 276 410 8.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 341 355 7.1E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 277 297 7.1E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 375 402 7.1E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 537 556 7.1E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 309 323 7.1E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RMET_RS00020 396c3dc0fde17103857c88221f263db3 579 Pfam PF00308 Bacterial dnaA protein 244 461 1.2E-86 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RMET_RS15860 1640841626c4cbcd9d314a0bd88690f7 256 SUPERFAMILY SSF52096 1 255 6.15E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS15860 1640841626c4cbcd9d314a0bd88690f7 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 255 4.0E-65 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS15860 1640841626c4cbcd9d314a0bd88690f7 256 Gene3D G3DSA:1.10.12.10 198 255 6.1E-22 T 22-04-2016 IPR014748 Crontonase, C-terminal RMET_RS15860 1640841626c4cbcd9d314a0bd88690f7 256 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 1 255 2.0E-126 T 22-04-2016 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18|UniPathway: UPA00930 RMET_RS15860 1640841626c4cbcd9d314a0bd88690f7 256 PANTHER PTHR11941 1 253 5.4E-98 T 22-04-2016 RMET_RS15860 1640841626c4cbcd9d314a0bd88690f7 256 PANTHER PTHR11941:SF76 1 253 5.4E-98 T 22-04-2016 RMET_RS15860 1640841626c4cbcd9d314a0bd88690f7 256 Gene3D G3DSA:3.90.226.10 1 195 2.3E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 SUPERFAMILY SSF159127 1 77 3.53E-21 T 22-04-2016 RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 PANTHER PTHR35177:SF2 1 88 2.0E-17 T 22-04-2016 RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 75 4.1E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 Pfam PF01455 HupF/HypC family 1 65 1.9E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 PANTHER PTHR35177 1 88 2.0E-17 T 22-04-2016 RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 6.4E-15 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 59 71 6.4E-15 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 6.4E-15 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS06510 63060635ca19de848ef30ae9c868b557 100 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 38 54 6.4E-15 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS00145 d2576ad9276b1115495c038f3942c5eb 330 PIRSF PIRSF017082 1 330 3.7E-73 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS00145 d2576ad9276b1115495c038f3942c5eb 330 PANTHER PTHR30349 1 330 3.7E-73 T 22-04-2016 RMET_RS00145 d2576ad9276b1115495c038f3942c5eb 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 327 4.0E-73 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS00145 d2576ad9276b1115495c038f3942c5eb 330 SUPERFAMILY SSF53850 115 290 1.52E-8 T 22-04-2016 RMET_RS00145 d2576ad9276b1115495c038f3942c5eb 330 PANTHER PTHR30349:SF16 1 330 3.7E-73 T 22-04-2016 RMET_RS12880 bb131b8e4a36fc2af27a41a40079010e 256 PANTHER PTHR13832 12 245 2.5E-40 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 RMET_RS12880 bb131b8e4a36fc2af27a41a40079010e 256 Pfam PF13672 Protein phosphatase 2C 22 204 1.8E-15 T 22-04-2016 RMET_RS12880 bb131b8e4a36fc2af27a41a40079010e 256 SMART SM00332 6 237 2.4E-23 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS12880 bb131b8e4a36fc2af27a41a40079010e 256 Gene3D G3DSA:3.60.40.10 7 238 7.6E-64 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS12880 bb131b8e4a36fc2af27a41a40079010e 256 SMART SM00331 15 239 6.8E-22 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS12880 bb131b8e4a36fc2af27a41a40079010e 256 SUPERFAMILY SSF81606 8 238 4.58E-61 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS12880 bb131b8e4a36fc2af27a41a40079010e 256 PANTHER PTHR13832:SF278 12 245 2.5E-40 T 22-04-2016 RMET_RS16310 614c81e2cff872b8fbe0be9993092243 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 75 97 3.8E-9 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS16310 614c81e2cff872b8fbe0be9993092243 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 3.8E-9 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS16310 614c81e2cff872b8fbe0be9993092243 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 213 232 3.8E-9 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS16310 614c81e2cff872b8fbe0be9993092243 273 PANTHER PTHR30413 23 272 4.9E-70 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS16310 614c81e2cff872b8fbe0be9993092243 273 PANTHER PTHR30413:SF2 23 272 4.9E-70 T 22-04-2016 RMET_RS16310 614c81e2cff872b8fbe0be9993092243 273 Pfam PF01061 ABC-2 type transporter 26 236 1.7E-38 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RMET_RS16310 614c81e2cff872b8fbe0be9993092243 273 PIRSF PIRSF006648 5 270 1.8E-22 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS17230 8a647aae71fbe31ab072844c66bae0ea 195 PANTHER PTHR30390 3 194 4.1E-87 T 22-04-2016 RMET_RS17230 8a647aae71fbe31ab072844c66bae0ea 195 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 4.1E-63 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 RMET_RS17230 8a647aae71fbe31ab072844c66bae0ea 195 PANTHER PTHR30390:SF5 3 194 4.1E-87 T 22-04-2016 RMET_RS17230 8a647aae71fbe31ab072844c66bae0ea 195 Pfam PF13580 SIS domain 18 145 1.0E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RMET_RS17230 8a647aae71fbe31ab072844c66bae0ea 195 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 191 37.683 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 RMET_RS17230 8a647aae71fbe31ab072844c66bae0ea 195 SUPERFAMILY SSF53697 3 190 2.6E-57 T 22-04-2016 RMET_RS17230 8a647aae71fbe31ab072844c66bae0ea 195 Gene3D G3DSA:3.40.50.10490 4 191 3.8E-61 T 22-04-2016 RMET_RS06325 b79cd491dace57968205081b3362cdb6 212 PANTHER PTHR13696 1 209 2.6E-64 T 22-04-2016 RMET_RS06325 b79cd491dace57968205081b3362cdb6 212 PIRSF PIRSF009320 1 210 1.5E-51 T 22-04-2016 RMET_RS06325 b79cd491dace57968205081b3362cdb6 212 Gene3D G3DSA:3.40.50.300 1 210 1.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06325 b79cd491dace57968205081b3362cdb6 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 159 1.7E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RMET_RS06325 b79cd491dace57968205081b3362cdb6 212 PANTHER PTHR13696:SF54 1 209 2.6E-64 T 22-04-2016 RMET_RS06325 b79cd491dace57968205081b3362cdb6 212 SUPERFAMILY SSF52540 1 210 6.44E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 63 413 2.7E-112 T 22-04-2016 IPR030931 Group II intron reverse transcriptase/maturase RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 Pfam PF08388 Group II intron, maturase-specific domain 350 426 2.0E-24 T 22-04-2016 IPR013597 Group II intron, maturase-specific RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 SUPERFAMILY SSF56672 91 414 3.61E-53 T 22-04-2016 RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 SMART SM00507 499 551 6.3E-9 T 22-04-2016 IPR003615 HNH nuclease RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 115 332 8.2E-43 T 22-04-2016 IPR000477 Reverse transcriptase domain RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 Pfam PF13655 N-terminal domain of reverse transcriptase 19 100 1.1E-28 T 22-04-2016 IPR025960 Reverse transcriptase, N-terminal domain RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 Pfam PF01844 HNH endonuclease 510 555 4.1E-9 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 PANTHER PTHR19446:SF383 99 364 5.0E-74 T 22-04-2016 RMET_RS14450 516e280e138352a543cbb633f47ed27c 566 PANTHER PTHR19446 99 364 5.0E-74 T 22-04-2016 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SUPERFAMILY SSF50249 347 445 8.21E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 8 525 8.9E-207 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Pfam PF00575 S1 RNA binding domain 455 525 2.8E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Pfam PF00575 S1 RNA binding domain 281 352 4.3E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Pfam PF00575 S1 RNA binding domain 24 90 1.8E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Pfam PF00575 S1 RNA binding domain 108 176 9.7E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Pfam PF00575 S1 RNA binding domain 194 265 3.2E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Pfam PF00575 S1 RNA binding domain 366 439 5.4E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SUPERFAMILY SSF50249 194 282 2.76E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SMART SM00316 108 176 2.1E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SMART SM00316 280 352 6.6E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SMART SM00316 24 92 0.0013 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SMART SM00316 367 439 3.5E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SMART SM00316 195 265 6.7E-29 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SMART SM00316 454 525 5.2E-18 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PIRSF PIRSF002111 1 539 3.0E-216 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 217 238 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 335 353 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 26 44 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 113 129 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 160 180 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 89 108 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 131 148 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 44 58 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PRINTS PR00681 Ribosomal protein S1 signature 295 314 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PANTHER PTHR10724:SF6 1 519 5.2E-246 T 22-04-2016 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SUPERFAMILY SSF50249 108 190 1.0E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SUPERFAMILY SSF50249 9 118 2.61E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Gene3D G3DSA:2.40.50.140 26 106 2.2E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Gene3D G3DSA:2.40.50.140 286 362 1.7E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SUPERFAMILY SSF50249 260 359 2.29E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Gene3D G3DSA:2.40.50.140 188 267 2.6E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Gene3D G3DSA:2.40.50.140 447 526 2.9E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Gene3D G3DSA:2.40.50.140 107 177 9.8E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 Gene3D G3DSA:2.40.50.140 363 442 2.3E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 PANTHER PTHR10724 1 519 5.2E-246 T 22-04-2016 RMET_RS03630 deff63bce65d3fdc8868d0ebe5990fca 564 SUPERFAMILY SSF50249 434 538 3.58E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 SUPERFAMILY SSF46955 8 130 1.98E-28 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 Gene3D G3DSA:1.10.1660.10 5 62 4.0E-22 T 22-04-2016 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 PANTHER PTHR30204 1 117 3.8E-25 T 22-04-2016 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 PANTHER PTHR30204:SF18 1 117 3.8E-25 T 22-04-2016 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 7.8E-50 T 22-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 Pfam PF09278 MerR, DNA binding 51 113 2.9E-18 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 1.2E-22 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 1.2E-22 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 1.2E-22 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 SMART SM00422 8 77 3.1E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 Gene3D G3DSA:1.10.1660.10 63 133 5.0E-25 T 22-04-2016 RMET_RS11605 d927175a4fe89f282a2d63d72abaa26a 135 Pfam PF00376 MerR family regulatory protein 9 46 3.0E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS08295 67ffead4d969f027736bea02a18c65cb 206 Gene3D G3DSA:1.20.1260.10 60 202 6.6E-19 T 22-04-2016 IPR012347 Ferritin-related RMET_RS08295 67ffead4d969f027736bea02a18c65cb 206 Pfam PF13668 Ferritin-like domain 63 196 4.2E-34 T 22-04-2016 RMET_RS08295 67ffead4d969f027736bea02a18c65cb 206 SUPERFAMILY SSF47240 60 204 5.61E-37 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 617 853 2.7E-65 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 71 309 1.5E-65 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 SUPERFAMILY SSF81593 328 487 1.88E-42 T 22-04-2016 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 62 994 19.06 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 SUPERFAMILY SSF81301 65 327 1.64E-72 T 22-04-2016 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 SUPERFAMILY SSF81593 864 992 1.1E-30 T 22-04-2016 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 Gene3D G3DSA:3.30.460.10 701 860 1.8E-51 T 22-04-2016 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 Gene3D G3DSA:3.30.460.10 148 318 9.3E-57 T 22-04-2016 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 PANTHER PTHR30621 71 980 9.9E-239 T 22-04-2016 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 SUPERFAMILY SSF81301 589 864 2.07E-75 T 22-04-2016 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 Pfam PF08335 GlnD PII-uridylyltransferase 338 487 1.5E-45 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RMET_RS05000 40e1336e297df14b98e127cc50e045b2 995 Pfam PF08335 GlnD PII-uridylyltransferase 875 964 2.0E-7 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RMET_RS13560 43b9f9e12f6ab7a2a10416bc8ca170bd 410 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 403 3.0E-148 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RMET_RS13560 43b9f9e12f6ab7a2a10416bc8ca170bd 410 PIRSF PIRSF020818 1 409 2.1E-167 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RMET_RS13560 43b9f9e12f6ab7a2a10416bc8ca170bd 410 Gene3D G3DSA:3.40.50.1820 337 401 6.3E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS13560 43b9f9e12f6ab7a2a10416bc8ca170bd 410 Gene3D G3DSA:3.40.50.1820 92 222 6.3E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS13560 43b9f9e12f6ab7a2a10416bc8ca170bd 410 SUPERFAMILY SSF53474 78 401 4.85E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS13560 43b9f9e12f6ab7a2a10416bc8ca170bd 410 Pfam PF06850 PHB de-polymerase C-terminus 204 404 6.4E-83 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 468 1.4E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 1.0E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 Gene3D G3DSA:3.50.50.60 256 400 7.5E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 Gene3D G3DSA:3.50.50.60 401 479 2.3E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PANTHER PTHR11938:SF75 233 329 6.0E-145 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PANTHER PTHR11938:SF75 345 480 6.0E-145 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PANTHER PTHR11938:SF75 36 217 6.0E-145 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 486 1.7E-221 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PANTHER PTHR11938 233 329 6.0E-145 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PANTHER PTHR11938 345 480 6.0E-145 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PANTHER PTHR11938 36 217 6.0E-145 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 3.4E-20 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 3.4E-20 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 3.4E-20 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 Gene3D G3DSA:1.10.1060.10 5 144 4.4E-40 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 SUPERFAMILY SSF51971 367 480 3.41E-11 T 22-04-2016 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 SUPERFAMILY SSF46548 2 154 9.42E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 Gene3D G3DSA:3.50.50.60 145 255 1.1E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16360 08bc81f9fe17737c2d823cc26c698ac8 487 SUPERFAMILY SSF51971 142 410 1.04E-65 T 22-04-2016 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 PANTHER PTHR23135 16 511 1.5E-163 T 22-04-2016 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 Pfam PF02875 Mur ligase family, glutamate ligase domain 353 441 1.8E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 SUPERFAMILY SSF53623 115 352 4.32E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 Gene3D G3DSA:3.40.1190.10 114 356 7.1E-81 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 Gene3D G3DSA:3.90.190.20 357 502 4.9E-56 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 SUPERFAMILY SSF63418 27 110 7.32E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 SUPERFAMILY SSF53244 353 508 1.53E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 PANTHER PTHR23135:SF4 16 511 1.5E-163 T 22-04-2016 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 30 506 4.0E-144 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 508 33.252 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 Gene3D G3DSA:3.40.1390.10 26 110 1.7E-13 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15690 7a193dcb364fb1268516952aac19fd4b 515 Pfam PF08245 Mur ligase middle domain 121 333 3.2E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS02320 3d81e2b9a0eb9535dab4bf07d0fc1543 144 SUPERFAMILY SSF52402 2 142 6.45E-31 T 22-04-2016 RMET_RS02320 3d81e2b9a0eb9535dab4bf07d0fc1543 144 Pfam PF00582 Universal stress protein family 3 140 4.3E-25 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS02320 3d81e2b9a0eb9535dab4bf07d0fc1543 144 Gene3D G3DSA:3.40.50.620 3 143 6.0E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS02320 3d81e2b9a0eb9535dab4bf07d0fc1543 144 PRINTS PR01438 Universal stress protein signature 118 140 7.0E-14 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS02320 3d81e2b9a0eb9535dab4bf07d0fc1543 144 PRINTS PR01438 Universal stress protein signature 1 18 7.0E-14 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS02320 3d81e2b9a0eb9535dab4bf07d0fc1543 144 PRINTS PR01438 Universal stress protein signature 100 112 7.0E-14 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS02320 3d81e2b9a0eb9535dab4bf07d0fc1543 144 PANTHER PTHR31964 4 143 6.4E-24 T 22-04-2016 RMET_RS04205 a8d32ff24c4ada9961e1a2cf5d403019 361 Gene3D G3DSA:3.20.20.70 8 356 4.9E-123 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS04205 a8d32ff24c4ada9961e1a2cf5d403019 361 PIRSF PIRSF000138 1 360 9.1E-115 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 RMET_RS04205 a8d32ff24c4ada9961e1a2cf5d403019 361 Pfam PF01070 FMN-dependent dehydrogenase 19 356 1.6E-117 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 RMET_RS04205 a8d32ff24c4ada9961e1a2cf5d403019 361 SUPERFAMILY SSF51395 6 355 1.83E-89 T 22-04-2016 RMET_RS04205 a8d32ff24c4ada9961e1a2cf5d403019 361 PANTHER PTHR10578 8 361 3.1E-134 T 22-04-2016 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 12 82 7.0E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 PRINTS PR00973 Ribosomal protein S17 family signature 31 54 9.7E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 PRINTS PR00973 Ribosomal protein S17 family signature 73 80 9.7E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 PRINTS PR00973 Ribosomal protein S17 family signature 63 73 9.7E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 12 82 5.8E-37 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 10 88 25.242 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 Gene3D G3DSA:2.40.50.140 12 90 4.5E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 PANTHER PTHR10744 12 90 6.5E-40 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 SUPERFAMILY SSF50249 12 89 7.71E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 Pfam PF00366 Ribosomal protein S17 17 83 1.0E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16590 36fcdb074c1ea047a2ef8e9c32177f87 92 ProSitePatterns PS00056 Ribosomal protein S17 signature. 63 75 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 PANTHER PTHR21600:SF2 236 472 4.5E-79 T 22-04-2016 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 PANTHER PTHR21600 236 472 4.5E-79 T 22-04-2016 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 SUPERFAMILY SSF55120 296 466 5.12E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 Pfam PF00849 RNA pseudouridylate synthase 298 431 5.0E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 SMART SM00363 235 297 6.3E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 SUPERFAMILY SSF55174 237 325 1.22E-13 T 22-04-2016 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 336 350 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 Gene3D G3DSA:3.10.290.10 237 289 3.5E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 302 462 4.0E-49 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RMET_RS10180 17e5482c22aa4780452408d62d30cd8c 631 Pfam PF01479 S4 domain 237 280 1.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 SUPERFAMILY SSF55347 133 363 5.66E-71 T 22-04-2016 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 SUPERFAMILY SSF51735 3 146 5.97E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 362 7.8E-51 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 SMART SM00859 2 121 1.0E-29 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 Gene3D G3DSA:3.30.360.10 142 359 7.9E-70 T 22-04-2016 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 376 33.038 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 270 284 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 PANTHER PTHR10174:SF116 102 178 5.7E-136 T 22-04-2016 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 PANTHER PTHR10174:SF116 200 377 5.7E-136 T 22-04-2016 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 PIRSF PIRSF000148 1 378 4.7E-63 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 1.9E-25 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 Gene3D G3DSA:3.40.50.720 2 141 3.4E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 PANTHER PTHR10174 102 178 5.7E-136 T 22-04-2016 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 PANTHER PTHR10174 200 377 5.7E-136 T 22-04-2016 RMET_RS12400 cb41c9ba72b7a8eb4774c12d0d48d1f8 378 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 376 1.6E-185 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS07515 93c7d6f7632e9803e5b570828ca05ca3 971 Pfam PF13700 Domain of unknown function (DUF4158) 13 169 3.8E-23 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 RMET_RS07515 93c7d6f7632e9803e5b570828ca05ca3 971 Pfam PF01526 Tn3 transposase DDE domain 564 946 7.7E-114 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RMET_RS07770 93c7d6f7632e9803e5b570828ca05ca3 971 Pfam PF13700 Domain of unknown function (DUF4158) 13 169 3.8E-23 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 RMET_RS07770 93c7d6f7632e9803e5b570828ca05ca3 971 Pfam PF01526 Tn3 transposase DDE domain 564 946 7.7E-114 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RMET_RS07580 93c7d6f7632e9803e5b570828ca05ca3 971 Pfam PF13700 Domain of unknown function (DUF4158) 13 169 3.8E-23 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 RMET_RS07580 93c7d6f7632e9803e5b570828ca05ca3 971 Pfam PF01526 Tn3 transposase DDE domain 564 946 7.7E-114 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RMET_RS17225 10585f799709978f54368ba343da0be7 284 Pfam PF04972 BON domain 81 130 4.4E-7 T 22-04-2016 IPR007055 BON domain RMET_RS17225 10585f799709978f54368ba343da0be7 284 Pfam PF04972 BON domain 140 204 5.4E-13 T 22-04-2016 IPR007055 BON domain RMET_RS17225 10585f799709978f54368ba343da0be7 284 SMART SM00749 145 208 2.6E-10 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RMET_RS17225 10585f799709978f54368ba343da0be7 284 SMART SM00749 66 130 250.0 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RMET_RS17225 10585f799709978f54368ba343da0be7 284 PANTHER PTHR34606:SF4 24 213 6.6E-44 T 22-04-2016 RMET_RS17225 10585f799709978f54368ba343da0be7 284 PANTHER PTHR34606 24 213 6.6E-44 T 22-04-2016 RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 Pfam PF00106 short chain dehydrogenase 7 206 9.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PANTHER PTHR24322 161 195 3.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PANTHER PTHR24322 11 145 3.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.6E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.6E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.6E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 Gene3D G3DSA:3.40.50.720 6 258 3.4E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09240 f47b9ee36fc0f1d5d26b0b4432782207 300 SUPERFAMILY SSF51735 2 264 2.48E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 PANTHER PTHR32552:SF14 24 87 7.5E-197 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 PANTHER PTHR32552:SF14 111 761 7.5E-197 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 Gene3D G3DSA:2.170.130.10 77 230 1.4E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 SUPERFAMILY SSF56935 77 761 2.02E-92 T 22-04-2016 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 PANTHER PTHR32552 24 87 7.5E-197 T 22-04-2016 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 PANTHER PTHR32552 111 761 7.5E-197 T 22-04-2016 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 212 1.0E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 121 760 6.9E-104 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 Gene3D G3DSA:2.40.170.20 237 761 7.6E-102 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS05575 113ca60717859c9d6e5495117a473da4 761 Pfam PF00593 TonB dependent receptor 528 759 4.3E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS15600 6550bea0954752d7295e2f0f5630f840 147 PANTHER PTHR22769:SF35 14 122 4.1E-24 T 22-04-2016 RMET_RS15600 6550bea0954752d7295e2f0f5630f840 147 SUPERFAMILY SSF55811 16 124 1.49E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS15600 6550bea0954752d7295e2f0f5630f840 147 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RMET_RS15600 6550bea0954752d7295e2f0f5630f840 147 Pfam PF00293 NUDIX domain 21 119 7.1E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS15600 6550bea0954752d7295e2f0f5630f840 147 PANTHER PTHR22769 14 122 4.1E-24 T 22-04-2016 RMET_RS15600 6550bea0954752d7295e2f0f5630f840 147 Gene3D G3DSA:3.90.79.10 19 143 4.4E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS15600 6550bea0954752d7295e2f0f5630f840 147 PRINTS PR00502 NUDIX hydrolase family signature 62 77 4.3E-9 T 22-04-2016 IPR020476 NUDIX hydrolase RMET_RS15600 6550bea0954752d7295e2f0f5630f840 147 PRINTS PR00502 NUDIX hydrolase family signature 48 62 4.3E-9 T 22-04-2016 IPR020476 NUDIX hydrolase RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 Gene3D G3DSA:1.20.1050.10 178 286 1.5E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 Gene3D G3DSA:3.40.30.10 47 177 5.8E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 PIRSF PIRSF015753 5 323 3.5E-130 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 SUPERFAMILY SSF52833 42 161 1.08E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 SUPERFAMILY SSF47616 175 325 7.94E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 PANTHER PTHR32419 1 326 6.4E-177 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 202 274 2.1E-14 T 22-04-2016 RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 1.7E-23 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS08335 9df90d53e0d00093b76c0d61eec81a32 328 PANTHER PTHR32419:SF6 1 326 6.4E-177 T 22-04-2016 RMET_RS10640 31d9ca1a8a48b2d0ea81351fe78a8d31 398 SUPERFAMILY SSF89796 4 397 1.57E-131 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS10640 31d9ca1a8a48b2d0ea81351fe78a8d31 398 Gene3D G3DSA:3.40.50.10540 3 217 2.9E-114 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS10640 31d9ca1a8a48b2d0ea81351fe78a8d31 398 Gene3D G3DSA:3.40.50.10540 307 397 2.9E-114 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS10640 31d9ca1a8a48b2d0ea81351fe78a8d31 398 PANTHER PTHR24023 49 384 4.0E-35 T 22-04-2016 RMET_RS10640 31d9ca1a8a48b2d0ea81351fe78a8d31 398 PANTHER PTHR24023:SF593 49 384 4.0E-35 T 22-04-2016 RMET_RS10640 31d9ca1a8a48b2d0ea81351fe78a8d31 398 Gene3D G3DSA:3.30.1540.10 224 306 1.9E-25 T 22-04-2016 RMET_RS10640 31d9ca1a8a48b2d0ea81351fe78a8d31 398 Pfam PF02515 CoA-transferase family III 6 374 1.3E-127 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 Pfam PF00535 Glycosyl transferase family 2 287 456 2.3E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PANTHER PTHR10587 190 714 2.0E-94 T 22-04-2016 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 163 842 1.2E-270 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 Pfam PF03552 Cellulose synthase 462 688 4.3E-12 T 22-04-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 Gene3D G3DSA:3.90.550.10 284 517 9.0E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 Pfam PF07238 PilZ domain 705 801 2.2E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 SUPERFAMILY SSF141371 707 797 9.81E-8 T 22-04-2016 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PRINTS PR01439 Cellulose synthase subunit A signature 678 699 3.2E-48 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PRINTS PR01439 Cellulose synthase subunit A signature 238 263 3.2E-48 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PRINTS PR01439 Cellulose synthase subunit A signature 210 230 3.2E-48 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PRINTS PR01439 Cellulose synthase subunit A signature 293 312 3.2E-48 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PRINTS PR01439 Cellulose synthase subunit A signature 604 623 3.2E-48 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PRINTS PR01439 Cellulose synthase subunit A signature 564 583 3.2E-48 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PRINTS PR01439 Cellulose synthase subunit A signature 374 398 3.2E-48 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PRINTS PR01439 Cellulose synthase subunit A signature 535 561 3.2E-48 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 SUPERFAMILY SSF53448 286 564 2.15E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS11325 fe4923e1910d953ced02089cc75fae50 857 PANTHER PTHR10587:SF94 190 714 2.0E-94 T 22-04-2016 RMET_RS07420 e7b120f9c26d82f7c9488cb699782b32 101 SUPERFAMILY SSF47413 1 66 1.52E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS07420 e7b120f9c26d82f7c9488cb699782b32 101 PANTHER PTHR10245 1 62 5.5E-15 T 22-04-2016 RMET_RS07420 e7b120f9c26d82f7c9488cb699782b32 101 Gene3D G3DSA:1.10.260.40 1 62 1.9E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS07420 e7b120f9c26d82f7c9488cb699782b32 101 SMART SM00530 6 61 1.1E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS07420 e7b120f9c26d82f7c9488cb699782b32 101 Pfam PF01381 Helix-turn-helix 7 57 1.5E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS11190 355af7b668183fcf4c5c7bc8898c11eb 576 Gene3D G3DSA:3.40.190.10 203 443 1.4E-41 T 22-04-2016 RMET_RS11190 355af7b668183fcf4c5c7bc8898c11eb 576 PIRSF PIRSF035859 2 575 2.4E-304 T 22-04-2016 IPR014597 ABC transporter, periplasmic substrate-binding protein GO:0005215 RMET_RS11190 355af7b668183fcf4c5c7bc8898c11eb 576 Gene3D G3DSA:3.40.190.10 80 202 5.5E-15 T 22-04-2016 RMET_RS11190 355af7b668183fcf4c5c7bc8898c11eb 576 SUPERFAMILY SSF53850 63 516 1.04E-62 T 22-04-2016 RMET_RS11190 355af7b668183fcf4c5c7bc8898c11eb 576 PANTHER PTHR30061 84 537 7.4E-20 T 22-04-2016 RMET_RS11190 355af7b668183fcf4c5c7bc8898c11eb 576 Pfam PF13416 Bacterial extracellular solute-binding protein 84 431 4.8E-12 T 22-04-2016 RMET_RS04390 a9917a3cfa13b82d0a52b1571a9fe595 276 SUPERFAMILY SSF53335 39 180 2.23E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS04390 a9917a3cfa13b82d0a52b1571a9fe595 276 Gene3D G3DSA:3.40.50.150 61 174 5.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS04390 a9917a3cfa13b82d0a52b1571a9fe595 276 Pfam PF13679 Methyltransferase domain 34 174 4.2E-43 T 22-04-2016 IPR025714 Methyltransferase domain RMET_RS04390 a9917a3cfa13b82d0a52b1571a9fe595 276 PANTHER PTHR13369 24 250 9.5E-18 T 22-04-2016 RMET_RS13235 9ea4d63c249be654882671f89c553a23 255 SUPERFAMILY SSF110857 53 169 1.96E-12 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RMET_RS13235 9ea4d63c249be654882671f89c553a23 255 Gene3D G3DSA:3.10.490.10 51 223 2.1E-23 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RMET_RS13235 9ea4d63c249be654882671f89c553a23 255 Pfam PF04752 ChaC-like protein 53 222 6.8E-41 T 22-04-2016 IPR006840 ChaC-like protein RMET_RS13235 9ea4d63c249be654882671f89c553a23 255 PANTHER PTHR12192:SF9 50 224 6.3E-41 T 22-04-2016 RMET_RS13235 9ea4d63c249be654882671f89c553a23 255 PANTHER PTHR12192 50 224 6.3E-41 T 22-04-2016 IPR006840 ChaC-like protein RMET_RS01685 0884b97863d836ee8d8b91a62e24c0aa 162 SUPERFAMILY SSF54593 2 121 1.97E-15 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS01685 0884b97863d836ee8d8b91a62e24c0aa 162 PANTHER PTHR41294 2 155 3.1E-36 T 22-04-2016 RMET_RS01685 0884b97863d836ee8d8b91a62e24c0aa 162 Gene3D G3DSA:3.10.180.10 5 114 3.3E-15 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS01685 0884b97863d836ee8d8b91a62e24c0aa 162 PANTHER PTHR41294:SF1 2 155 3.1E-36 T 22-04-2016 RMET_RS07905 bb917924c56d8c2edabe2f3f2c245180 211 PANTHER PTHR11228 1 155 1.6E-25 T 22-04-2016 RMET_RS07905 bb917924c56d8c2edabe2f3f2c245180 211 PANTHER PTHR11228:SF6 1 155 1.6E-25 T 22-04-2016 RMET_RS07905 bb917924c56d8c2edabe2f3f2c245180 211 SUPERFAMILY SSF102114 46 137 4.32E-7 T 22-04-2016 RMET_RS07905 bb917924c56d8c2edabe2f3f2c245180 211 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 211 2.3E-107 T 22-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RMET_RS07905 bb917924c56d8c2edabe2f3f2c245180 211 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 211 33.816 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RMET_RS07905 bb917924c56d8c2edabe2f3f2c245180 211 Pfam PF13394 4Fe-4S single cluster domain 25 124 2.6E-5 T 22-04-2016 RMET_RS07905 bb917924c56d8c2edabe2f3f2c245180 211 PIRSF PIRSF000370 1 211 3.4E-37 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RMET_RS07905 bb917924c56d8c2edabe2f3f2c245180 211 Gene3D G3DSA:3.80.30.10 88 129 1.2E-7 T 22-04-2016 RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 215 339 5.8E-30 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 Gene3D G3DSA:3.30.1220.10 212 339 9.4E-16 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 Gene3D G3DSA:3.40.50.300 4 36 7.1E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 Gene3D G3DSA:3.40.50.300 39 190 1.5E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 PANTHER PTHR13748 4 292 1.5E-117 T 22-04-2016 RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 PANTHER PTHR13748 313 353 1.5E-117 T 22-04-2016 RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 40 171 1.5E-15 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 36 1.4E-5 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 PANTHER PTHR13748:SF4 4 292 1.5E-117 T 22-04-2016 RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 PANTHER PTHR13748:SF4 313 353 1.5E-117 T 22-04-2016 RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 SUPERFAMILY SSF52540 4 271 2.71E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00640 993439b4a9ab7c192914da5f065abff0 391 SMART SM00833 215 339 1.1E-47 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS02820 b33da6ffcd00cccc202239b6574c93ca 231 Pfam PF00912 Transglycosylase 45 209 3.3E-61 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RMET_RS02820 b33da6ffcd00cccc202239b6574c93ca 231 SUPERFAMILY SSF53955 47 230 6.19E-70 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS02820 b33da6ffcd00cccc202239b6574c93ca 231 PANTHER PTHR32282:SF5 49 231 5.5E-82 T 22-04-2016 RMET_RS02820 b33da6ffcd00cccc202239b6574c93ca 231 Gene3D G3DSA:1.10.3810.10 48 224 2.7E-69 T 22-04-2016 RMET_RS02820 b33da6ffcd00cccc202239b6574c93ca 231 PANTHER PTHR32282 49 231 5.5E-82 T 22-04-2016 RMET_RS13650 362235e6dc126f98e0b0026da40d3ce2 441 PANTHER PTHR30576 253 440 1.4E-79 T 22-04-2016 RMET_RS13650 362235e6dc126f98e0b0026da40d3ce2 441 PANTHER PTHR30576:SF0 253 440 1.4E-79 T 22-04-2016 RMET_RS13650 362235e6dc126f98e0b0026da40d3ce2 441 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 181 441 4.2E-92 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RMET_RS13650 362235e6dc126f98e0b0026da40d3ce2 441 Pfam PF02397 Bacterial sugar transferase 254 435 5.2E-54 T 22-04-2016 IPR003362 Bacterial sugar transferase RMET_RS04150 eadac616668e449cb094ca9da0a495eb 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 328 3.0E-84 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04150 eadac616668e449cb094ca9da0a495eb 335 PANTHER PTHR30349 13 300 1.4E-92 T 22-04-2016 RMET_RS04150 eadac616668e449cb094ca9da0a495eb 335 PANTHER PTHR30349:SF32 13 300 1.4E-92 T 22-04-2016 RMET_RS04150 eadac616668e449cb094ca9da0a495eb 335 SUPERFAMILY SSF53850 116 298 3.26E-10 T 22-04-2016 RMET_RS04150 eadac616668e449cb094ca9da0a495eb 335 PIRSF PIRSF017082 1 334 2.8E-76 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 Pfam PF00561 alpha/beta hydrolase fold 50 287 6.7E-26 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 SUPERFAMILY SSF53474 23 302 1.79E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 Gene3D G3DSA:3.40.50.1820 19 301 1.1E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 PANTHER PTHR10992 21 302 2.0E-54 T 22-04-2016 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 3.6E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 90 3.6E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 3.6E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 PRINTS PR00412 Epoxide hydrolase signature 56 74 5.0E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 PRINTS PR00412 Epoxide hydrolase signature 133 146 5.0E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 PRINTS PR00412 Epoxide hydrolase signature 277 299 5.0E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS08815 b81b94b76df0a763fd6bfecdb98be3b6 302 PRINTS PR00412 Epoxide hydrolase signature 119 132 5.0E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 PANTHER PTHR22855 1 286 2.5E-152 T 22-04-2016 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 PANTHER PTHR22855:SF17 1 286 2.5E-152 T 22-04-2016 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 Gene3D G3DSA:3.90.226.10 22 288 2.6E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 1.9E-127 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 3.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 3.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 3.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 3.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 3.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 SUPERFAMILY SSF52096 27 284 2.25E-86 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 Pfam PF01039 Carboxyl transferase domain 108 241 1.4E-13 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS12365 71f8758739a29f2476423b520c863c2e 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 37.903 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05890 086d2c0b39bb395419c22bd0c7eb2c33 243 SUPERFAMILY SSF55068 52 221 2.49E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS05890 086d2c0b39bb395419c22bd0c7eb2c33 243 PANTHER PTHR10173:SF29 21 239 6.3E-84 T 22-04-2016 RMET_RS05890 086d2c0b39bb395419c22bd0c7eb2c33 243 Pfam PF01625 Peptide methionine sulfoxide reductase 60 210 3.8E-55 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS05890 086d2c0b39bb395419c22bd0c7eb2c33 243 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 58 218 34.758 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS05890 086d2c0b39bb395419c22bd0c7eb2c33 243 PANTHER PTHR10173 21 239 6.3E-84 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RMET_RS05890 086d2c0b39bb395419c22bd0c7eb2c33 243 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 59 209 8.1E-52 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS05890 086d2c0b39bb395419c22bd0c7eb2c33 243 Gene3D G3DSA:3.30.1060.10 41 211 1.5E-65 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS11165 a1b1720711617aac9d9acc4649e2feeb 340 SUPERFAMILY SSF53756 2 318 1.81E-65 T 22-04-2016 RMET_RS11165 a1b1720711617aac9d9acc4649e2feeb 340 PANTHER PTHR30160:SF8 3 283 1.5E-48 T 22-04-2016 RMET_RS11165 a1b1720711617aac9d9acc4649e2feeb 340 Gene3D G3DSA:3.40.50.2000 176 306 2.9E-28 T 22-04-2016 RMET_RS11165 a1b1720711617aac9d9acc4649e2feeb 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 80 291 1.6E-37 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RMET_RS11165 a1b1720711617aac9d9acc4649e2feeb 340 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 318 1.1E-86 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RMET_RS11165 a1b1720711617aac9d9acc4649e2feeb 340 Gene3D G3DSA:3.40.50.2000 2 157 1.7E-35 T 22-04-2016 RMET_RS11165 a1b1720711617aac9d9acc4649e2feeb 340 PANTHER PTHR30160 3 283 1.5E-48 T 22-04-2016 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 Pfam PF13953 PapC C-terminal domain 820 884 2.3E-21 T 22-04-2016 IPR025949 PapC-like, C-terminal domain RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 Pfam PF13954 PapC N-terminal domain 59 226 3.0E-35 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 Pfam PF00577 Outer membrane usher protein 241 811 2.8E-137 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 PANTHER PTHR30451:SF7 620 903 0.0 T 22-04-2016 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 PANTHER PTHR30451:SF7 20 133 0.0 T 22-04-2016 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 PANTHER PTHR30451:SF7 157 601 0.0 T 22-04-2016 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 SUPERFAMILY SSF141729 57 203 1.07E-25 T 22-04-2016 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 PANTHER PTHR30451 620 903 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 PANTHER PTHR30451 20 133 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08360 b769f8da2c0ee456f4aa8e903bc3c1c8 929 PANTHER PTHR30451 157 601 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS01680 d3fa4656da64f61fb87e8d423658492c 170 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 141 4.4E-18 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS01680 d3fa4656da64f61fb87e8d423658492c 170 PANTHER PTHR11717:SF18 7 160 4.3E-35 T 22-04-2016 RMET_RS01680 d3fa4656da64f61fb87e8d423658492c 170 PANTHER PTHR11717 7 160 4.3E-35 T 22-04-2016 RMET_RS01680 d3fa4656da64f61fb87e8d423658492c 170 SMART SM00226 6 144 2.5E-40 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS01680 d3fa4656da64f61fb87e8d423658492c 170 Gene3D G3DSA:3.40.50.270 4 142 5.6E-41 T 22-04-2016 RMET_RS01680 d3fa4656da64f61fb87e8d423658492c 170 SUPERFAMILY SSF52788 6 144 4.45E-42 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS04805 b7af57631c3844ad01724adbd3ed5fbe 282 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 260 281 6.9E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS04805 b7af57631c3844ad01724adbd3ed5fbe 282 PANTHER PTHR24220 36 282 2.5E-112 T 22-04-2016 RMET_RS04805 b7af57631c3844ad01724adbd3ed5fbe 282 PANTHER PTHR24220:SF366 36 282 2.5E-112 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD RMET_RS04805 b7af57631c3844ad01724adbd3ed5fbe 282 SUPERFAMILY SSF52540 33 279 3.59E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04805 b7af57631c3844ad01724adbd3ed5fbe 282 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 34 282 3.2E-106 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD RMET_RS04805 b7af57631c3844ad01724adbd3ed5fbe 282 Pfam PF00005 ABC transporter 50 209 8.9E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS04805 b7af57631c3844ad01724adbd3ed5fbe 282 Gene3D G3DSA:3.40.50.300 33 277 2.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04805 b7af57631c3844ad01724adbd3ed5fbe 282 ProSitePatterns PS00211 ABC transporters family signature. 181 195 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 SUPERFAMILY SSF51556 68 367 3.67E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 Gene3D G3DSA:2.30.40.10 24 77 3.2E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 PANTHER PTHR22642 58 406 8.2E-142 T 22-04-2016 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 Gene3D G3DSA:3.20.20.140 78 353 4.2E-41 T 22-04-2016 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 Hamap MF_00372 Imidazolonepropionase [hutI]. 10 407 42.043 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 SUPERFAMILY SSF51338 369 407 2.34E-25 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 SUPERFAMILY SSF51338 9 68 2.34E-25 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 TIGRFAM TIGR01224 hutI: imidazolonepropionase 29 406 4.2E-146 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 Pfam PF01979 Amidohydrolase family 66 405 7.7E-15 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 PANTHER PTHR22642:SF1 58 406 8.2E-142 T 22-04-2016 RMET_RS14300 ed5d086e12cd1a5849c8e637aced45e8 415 Gene3D G3DSA:2.30.40.10 354 387 2.7E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 SUPERFAMILY SSF81653 128 236 4.97E-30 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PANTHER PTHR24093 5 907 3.9E-301 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Gene3D G3DSA:3.40.1110.10 328 548 6.0E-53 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Gene3D G3DSA:2.70.150.10 123 237 6.5E-37 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Gene3D G3DSA:2.70.150.10 33 69 6.5E-37 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Pfam PF00689 Cation transporting ATPase, C-terminus 726 899 3.0E-40 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Gene3D G3DSA:1.20.1110.10 611 902 1.2E-106 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Gene3D G3DSA:1.20.1110.10 70 122 1.2E-106 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 563 573 1.3E-41 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 175 189 1.3E-41 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 678 1.3E-41 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 338 352 1.3E-41 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 552 1.3E-41 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 661 1.3E-41 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Pfam PF00702 haloacid dehalogenase-like hydrolase 335 656 8.9E-19 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 SUPERFAMILY SSF81665 18 128 1.09E-120 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 SUPERFAMILY SSF81665 238 332 1.09E-120 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 SUPERFAMILY SSF81665 692 904 1.09E-120 T 22-04-2016 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 97 359 8.2E-43 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 732 4.9E-36 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 SUPERFAMILY SSF56784 336 356 3.84E-57 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 SUPERFAMILY SSF56784 496 746 3.84E-57 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Pfam PF00690 Cation transporter/ATPase, N-terminus 18 85 2.6E-15 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 340 346 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 674 699 8.0E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 614 630 8.0E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 642 658 8.0E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 499 517 8.0E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 Pfam PF00122 E1-E2 ATPase 96 329 7.2E-65 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 SMART SM00831 17 90 1.5E-32 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal RMET_RS11100 78e2e143f2d9431f6779584940a445d6 912 SUPERFAMILY SSF81660 345 545 1.64E-54 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RMET_RS01945 e3a66b43db05768ac3d1255482fa9f83 196 Gene3D G3DSA:1.10.357.10 58 194 6.5E-56 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS01945 e3a66b43db05768ac3d1255482fa9f83 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS01945 e3a66b43db05768ac3d1255482fa9f83 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS01945 e3a66b43db05768ac3d1255482fa9f83 196 PANTHER PTHR30055 2 191 6.7E-23 T 22-04-2016 RMET_RS01945 e3a66b43db05768ac3d1255482fa9f83 196 SUPERFAMILY SSF46689 2 69 3.28E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS01945 e3a66b43db05768ac3d1255482fa9f83 196 Gene3D G3DSA:1.10.10.60 5 57 1.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS01945 e3a66b43db05768ac3d1255482fa9f83 196 SUPERFAMILY SSF48498 77 192 5.93E-20 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS01945 e3a66b43db05768ac3d1255482fa9f83 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 6.8E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 Pfam PF00672 HAMP domain 169 239 3.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 SUPERFAMILY SSF47384 226 308 1.86E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 461 1.3E-132 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 1.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 462 7.6E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 PANTHER PTHR24423:SF354 1 10 3.3E-95 T 22-04-2016 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 PANTHER PTHR24423:SF354 183 466 3.3E-95 T 22-04-2016 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 SMART SM00304 189 242 6.6E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 SMART SM00387 352 464 2.5E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 1.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 SUPERFAMILY SSF55874 299 461 4.45E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 SMART SM00388 243 309 9.9E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 Gene3D G3DSA:3.30.565.10 297 461 8.8E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 PANTHER PTHR24423 1 10 3.3E-95 T 22-04-2016 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 PANTHER PTHR24423 183 466 3.3E-95 T 22-04-2016 RMET_RS08775 7ef9d32d6487cd365f096e0cad0c95cc 469 Gene3D G3DSA:1.10.287.130 233 296 1.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08065 2b1b1c74c324b52f5d1df4b891fd4d60 179 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 59 99 7.5E-8 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS08065 2b1b1c74c324b52f5d1df4b891fd4d60 179 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 106 9.0E-9 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS08065 2b1b1c74c324b52f5d1df4b891fd4d60 179 PANTHER PTHR35446 1 174 1.3E-20 T 22-04-2016 RMET_RS08065 2b1b1c74c324b52f5d1df4b891fd4d60 179 SUPERFAMILY SSF69118 3 177 3.27E-42 T 22-04-2016 IPR029032 AhpD-like RMET_RS08065 2b1b1c74c324b52f5d1df4b891fd4d60 179 Gene3D G3DSA:1.20.1290.10 140 177 1.0E-27 T 22-04-2016 IPR029032 AhpD-like RMET_RS08065 2b1b1c74c324b52f5d1df4b891fd4d60 179 Gene3D G3DSA:1.20.1290.10 3 90 1.0E-27 T 22-04-2016 IPR029032 AhpD-like RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 PANTHER PTHR11938:SF8 1 31 3.6E-130 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 PANTHER PTHR11938:SF8 134 143 3.6E-130 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 PANTHER PTHR11938:SF8 170 300 3.6E-130 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Gene3D G3DSA:3.30.70.20 174 195 2.0E-10 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Gene3D G3DSA:3.30.70.20 10 26 2.0E-10 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Gene3D G3DSA:3.30.70.20 125 133 2.0E-10 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Pfam PF13247 4Fe-4S dicluster domain 175 271 9.7E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Gene3D G3DSA:3.30.70.20 436 465 9.0E-75 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Gene3D G3DSA:3.30.70.20 236 358 9.0E-75 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 2.3E-29 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 SUPERFAMILY SSF54862 1 497 1.57E-180 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Gene3D G3DSA:1.10.3650.10 359 434 3.1E-29 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 PANTHER PTHR11938 1 31 3.6E-130 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 PANTHER PTHR11938 134 143 3.6E-130 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 PANTHER PTHR11938 170 300 3.6E-130 T 22-04-2016 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 489 9.4E-292 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RMET_RS10380 6bcc0d620343eed01f5c8a20e2985c65 517 Gene3D G3DSA:3.30.70.20 196 235 1.9E-24 T 22-04-2016 RMET_RS06790 7fc30b8f95af23054ffaa7125c9e9c4f 459 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 1 305 3.3E-66 T 22-04-2016 IPR014150 Conjugal transfer, TrbL RMET_RS06790 7fc30b8f95af23054ffaa7125c9e9c4f 459 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 4.3E-52 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RMET_RS05240 d53d3f2825d38f65629bc44828858ff2 275 PANTHER PTHR10060 1 266 8.0E-69 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS05240 d53d3f2825d38f65629bc44828858ff2 275 Pfam PF01026 TatD related DNase 3 261 9.9E-58 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS05240 d53d3f2825d38f65629bc44828858ff2 275 SUPERFAMILY SSF51556 2 260 1.09E-70 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS05240 d53d3f2825d38f65629bc44828858ff2 275 Gene3D G3DSA:3.20.20.140 1 260 4.7E-70 T 22-04-2016 RMET_RS05240 d53d3f2825d38f65629bc44828858ff2 275 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RMET_RS05240 d53d3f2825d38f65629bc44828858ff2 275 PIRSF PIRSF005902 1 265 8.9E-62 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 19 28 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 Gene3D G3DSA:1.10.240.10 220 327 2.6E-35 T 22-04-2016 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 Pfam PF00579 tRNA synthetases class I (W and Y) 9 292 8.2E-53 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 Gene3D G3DSA:3.40.50.620 9 219 8.3E-68 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 2.1E-72 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 PANTHER PTHR10055:SF6 8 341 1.9E-160 T 22-04-2016 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 PANTHER PTHR10055 8 341 1.9E-160 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RMET_RS02225 c77cb66d6bc7b027481a72b08aacdb63 342 SUPERFAMILY SSF52374 12 337 4.47E-78 T 22-04-2016 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 Gene3D G3DSA:3.40.220.10 1 148 1.2E-44 T 22-04-2016 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 SUPERFAMILY SSF52949 1 199 2.04E-33 T 22-04-2016 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 SUPERFAMILY SSF53187 194 508 7.22E-125 T 22-04-2016 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 Gene3D G3DSA:3.40.630.10 194 508 3.1E-139 T 22-04-2016 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 PANTHER PTHR11963 22 509 1.5E-199 T 22-04-2016 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 201 501 3.0E-121 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 PRINTS PR00481 Cytosol aminopeptidase signature 358 378 1.4E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 PRINTS PR00481 Cytosol aminopeptidase signature 336 357 1.4E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 PRINTS PR00481 Cytosol aminopeptidase signature 299 320 1.4E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 PRINTS PR00481 Cytosol aminopeptidase signature 277 294 1.4E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 PRINTS PR00481 Cytosol aminopeptidase signature 386 401 1.4E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 27 146 2.1E-21 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 11 510 36.982 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 362 369 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RMET_RS14085 3d364a4503d793c73d5a60b41977d317 510 PANTHER PTHR11963:SF13 22 509 1.5E-199 T 22-04-2016 RMET_RS11435 82a75f8286e5be3ca976d49649c8436f 243 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 206 1.2E-35 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RMET_RS11435 82a75f8286e5be3ca976d49649c8436f 243 PANTHER PTHR30625 22 217 5.4E-44 T 22-04-2016 RMET_RS11435 82a75f8286e5be3ca976d49649c8436f 243 PANTHER PTHR30625:SF3 22 217 5.4E-44 T 22-04-2016 RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 PANTHER PTHR10366:SF430 24 115 2.9E-28 T 22-04-2016 RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 PANTHER PTHR10366:SF430 151 340 2.9E-28 T 22-04-2016 RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 Pfam PF04321 RmlD substrate binding domain 152 290 7.0E-7 T 22-04-2016 IPR029903 RmlD-like substrate binding domain RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 PANTHER PTHR10366 24 115 2.9E-28 T 22-04-2016 RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 PANTHER PTHR10366 151 340 2.9E-28 T 22-04-2016 RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 Gene3D G3DSA:3.40.50.720 138 282 2.4E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 Pfam PF02254 TrkA-N domain 26 80 3.0E-6 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 Gene3D G3DSA:3.40.50.720 20 85 3.3E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 SUPERFAMILY SSF51735 25 95 2.87E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14340 a02b6ef4b8bf93289d1bd70bd6e2eeb4 341 SUPERFAMILY SSF51735 131 334 2.87E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06375 d33085f3dcb3b2e596f75994e6886953 288 Pfam PF03641 Possible lysine decarboxylase 144 273 4.8E-30 T 22-04-2016 IPR031100 LOG family RMET_RS06375 d33085f3dcb3b2e596f75994e6886953 288 SUPERFAMILY SSF102405 109 275 1.98E-53 T 22-04-2016 RMET_RS06375 d33085f3dcb3b2e596f75994e6886953 288 SUPERFAMILY SSF102405 31 70 1.98E-53 T 22-04-2016 RMET_RS06375 d33085f3dcb3b2e596f75994e6886953 288 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 131 275 1.1E-30 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RMET_RS06375 d33085f3dcb3b2e596f75994e6886953 288 PANTHER PTHR31223:SF1 103 278 2.9E-61 T 22-04-2016 RMET_RS06375 d33085f3dcb3b2e596f75994e6886953 288 Gene3D G3DSA:3.40.50.450 38 71 7.1E-66 T 22-04-2016 RMET_RS06375 d33085f3dcb3b2e596f75994e6886953 288 Gene3D G3DSA:3.40.50.450 110 280 7.1E-66 T 22-04-2016 RMET_RS06375 d33085f3dcb3b2e596f75994e6886953 288 PANTHER PTHR31223 103 278 2.9E-61 T 22-04-2016 RMET_RS01800 c2633871742c279f4a995deb528c8345 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 205 4.7E-22 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RMET_RS01800 c2633871742c279f4a995deb528c8345 266 PANTHER PTHR10788 12 242 1.6E-45 T 22-04-2016 RMET_RS01800 c2633871742c279f4a995deb528c8345 266 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 11 235 2.8E-45 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RMET_RS01800 c2633871742c279f4a995deb528c8345 266 Pfam PF02358 Trehalose-phosphatase 14 216 4.5E-39 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RMET_RS01800 c2633871742c279f4a995deb528c8345 266 PANTHER PTHR10788:SF42 12 242 1.6E-45 T 22-04-2016 RMET_RS01800 c2633871742c279f4a995deb528c8345 266 SUPERFAMILY SSF56784 12 238 2.28E-41 T 22-04-2016 IPR023214 HAD-like domain RMET_RS01800 c2633871742c279f4a995deb528c8345 266 Gene3D G3DSA:3.40.50.1000 159 240 8.3E-41 T 22-04-2016 IPR023214 HAD-like domain RMET_RS01800 c2633871742c279f4a995deb528c8345 266 Gene3D G3DSA:3.40.50.1000 12 86 8.3E-41 T 22-04-2016 IPR023214 HAD-like domain RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 SUPERFAMILY SSF53335 15 282 1.18E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 PANTHER PTHR18895 15 279 1.7E-83 T 22-04-2016 RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 Gene3D G3DSA:1.10.8.10 21 92 1.3E-23 T 22-04-2016 RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 9 285 40.556 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 Gene3D G3DSA:3.40.50.150 94 284 2.0E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 Pfam PF13847 Methyltransferase domain 118 250 2.3E-15 T 22-04-2016 IPR025714 Methyltransferase domain RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 280 9.3E-84 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 190 196 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 PANTHER PTHR18895:SF64 15 279 1.7E-83 T 22-04-2016 RMET_RS16060 092d0d356f9385720f02142dc0a29880 287 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 281 7.3E-66 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 PANTHER PTHR30290:SF2 407 628 6.0E-159 T 22-04-2016 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 PANTHER PTHR30290:SF2 13 378 6.0E-159 T 22-04-2016 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 SUPERFAMILY SSF53850 67 379 3.26E-115 T 22-04-2016 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 SUPERFAMILY SSF53850 406 623 3.26E-115 T 22-04-2016 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 Gene3D G3DSA:3.10.105.10 342 380 2.1E-50 T 22-04-2016 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 Gene3D G3DSA:3.10.105.10 418 587 2.1E-50 T 22-04-2016 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 PIRSF PIRSF002741 24 619 1.2E-92 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 PANTHER PTHR30290 407 628 6.0E-159 T 22-04-2016 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 PANTHER PTHR30290 13 378 6.0E-159 T 22-04-2016 RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 122 530 1.5E-78 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RMET_RS10775 ca7dcbe6f001bca63920aff1946dd46e 628 Gene3D G3DSA:3.40.190.10 180 341 5.6E-34 T 22-04-2016 RMET_RS05445 3539664dc1f96da84629539ddca40623 202 Gene3D G3DSA:2.40.100.10 37 200 6.4E-54 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS05445 3539664dc1f96da84629539ddca40623 202 PANTHER PTHR11071:SF192 42 200 4.0E-56 T 22-04-2016 RMET_RS05445 3539664dc1f96da84629539ddca40623 202 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 75 92 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RMET_RS05445 3539664dc1f96da84629539ddca40623 202 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 41 198 2.2E-47 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RMET_RS05445 3539664dc1f96da84629539ddca40623 202 PANTHER PTHR11071 42 200 4.0E-56 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RMET_RS05445 3539664dc1f96da84629539ddca40623 202 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 69 2.7E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RMET_RS05445 3539664dc1f96da84629539ddca40623 202 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 80 92 2.7E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RMET_RS05445 3539664dc1f96da84629539ddca40623 202 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 170 2.7E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RMET_RS05445 3539664dc1f96da84629539ddca40623 202 SUPERFAMILY SSF50891 37 199 1.61E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS06355 f5fc2e44567fe1829747992259c63baf 375 Gene3D G3DSA:2.40.128.140 39 69 2.4E-102 T 22-04-2016 RMET_RS06355 f5fc2e44567fe1829747992259c63baf 375 Gene3D G3DSA:2.40.128.140 105 372 2.4E-102 T 22-04-2016 RMET_RS06355 f5fc2e44567fe1829747992259c63baf 375 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 42 373 6.4E-90 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 RMET_RS08420 2ba8699877fd513dc6a998cec5e2ad80 69 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 2 53 3.5E-14 T 22-04-2016 IPR014547 Uncharacterised conserved protein UCP028477 RMET_RS17025 421df876d0cdd495b7961f38a1051cce 509 Pfam PF12693 GspL periplasmic domain 343 477 1.2E-19 T 22-04-2016 IPR025691 GspL periplasmic domain RMET_RS17025 421df876d0cdd495b7961f38a1051cce 509 SUPERFAMILY SSF53067 2 165 4.79E-21 T 22-04-2016 RMET_RS17025 421df876d0cdd495b7961f38a1051cce 509 Pfam PF05134 Type II secretion system (T2SS), protein L 5 335 4.7E-33 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RMET_RS07340 942c42b99702162c5ae7f2999e52ac2a 149 PANTHER PTHR12901 1 142 2.9E-46 T 22-04-2016 RMET_RS07340 942c42b99702162c5ae7f2999e52ac2a 149 Gene3D G3DSA:3.30.530.20 1 142 1.1E-42 T 22-04-2016 IPR023393 START-like domain RMET_RS07340 942c42b99702162c5ae7f2999e52ac2a 149 SUPERFAMILY SSF55961 1 142 3.34E-32 T 22-04-2016 RMET_RS07340 942c42b99702162c5ae7f2999e52ac2a 149 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 134 2.7E-30 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain RMET_RS07340 942c42b99702162c5ae7f2999e52ac2a 149 PANTHER PTHR12901:SF7 1 142 2.9E-46 T 22-04-2016 RMET_RS07675 c789bf8306f8dec95e0baed72ef8a936 168 Gene3D G3DSA:3.40.50.1450 21 156 5.5E-18 T 22-04-2016 IPR023430 Peptidase HybD-like domain RMET_RS07675 c789bf8306f8dec95e0baed72ef8a936 168 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 21 156 3.2E-19 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RMET_RS07675 c789bf8306f8dec95e0baed72ef8a936 168 SUPERFAMILY SSF53163 20 156 1.83E-25 T 22-04-2016 IPR023430 Peptidase HybD-like domain RMET_RS04585 4100ae069fe0b85346c66d8b5d5a795e 188 Gene3D G3DSA:1.10.10.10 118 182 9.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04585 4100ae069fe0b85346c66d8b5d5a795e 188 SUPERFAMILY SSF88946 10 85 1.26E-8 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS04585 4100ae069fe0b85346c66d8b5d5a795e 188 Pfam PF08281 Sigma-70, region 4 126 173 5.7E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS04585 4100ae069fe0b85346c66d8b5d5a795e 188 SUPERFAMILY SSF88659 117 181 1.31E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS04585 4100ae069fe0b85346c66d8b5d5a795e 188 Gene3D G3DSA:1.10.1740.10 4 77 2.1E-8 T 22-04-2016 RMET_RS04585 4100ae069fe0b85346c66d8b5d5a795e 188 PANTHER PTHR30173 4 184 2.5E-21 T 22-04-2016 RMET_RS04585 4100ae069fe0b85346c66d8b5d5a795e 188 Pfam PF04542 Sigma-70 region 2 15 75 1.0E-4 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS04585 4100ae069fe0b85346c66d8b5d5a795e 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 181 8.0E-21 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13030 3c10f0f284e4c4bf04dcc529db4d5be6 412 PANTHER PTHR11926:SF394 1 406 3.3E-60 T 22-04-2016 RMET_RS13030 3c10f0f284e4c4bf04dcc529db4d5be6 412 PANTHER PTHR11926 1 406 3.3E-60 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 RMET_RS13030 3c10f0f284e4c4bf04dcc529db4d5be6 412 Gene3D G3DSA:3.40.50.2000 292 385 9.8E-10 T 22-04-2016 RMET_RS13030 3c10f0f284e4c4bf04dcc529db4d5be6 412 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 211 354 2.3E-4 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 RMET_RS13030 3c10f0f284e4c4bf04dcc529db4d5be6 412 Gene3D G3DSA:3.40.50.2000 1 265 4.7E-58 T 22-04-2016 RMET_RS13030 3c10f0f284e4c4bf04dcc529db4d5be6 412 SUPERFAMILY SSF53756 1 408 1.7E-83 T 22-04-2016 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 PANTHER PTHR11451 3 319 3.3E-89 T 22-04-2016 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 Gene3D G3DSA:3.90.800.10 70 186 1.4E-33 T 22-04-2016 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 311 3.0E-95 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 195 1.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 209 1.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 1.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 1.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 1.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 SUPERFAMILY SSF48163 305 464 1.7E-39 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 Gene3D G3DSA:1.10.1160.10 238 318 2.1E-33 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 SUPERFAMILY SSF52374 5 302 2.95E-105 T 22-04-2016 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 PANTHER PTHR11451:SF41 3 319 3.3E-89 T 22-04-2016 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 Gene3D G3DSA:1.10.8.70 324 363 2.8E-4 T 22-04-2016 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 465 31.411 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 463 4.1E-165 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 Gene3D G3DSA:1.10.10.350 369 464 1.7E-24 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 Gene3D G3DSA:3.40.50.620 187 236 1.7E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS10745 069951e3f514bd5fface73bf0a77b674 465 Gene3D G3DSA:3.40.50.620 5 69 1.7E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS07375 1d2856fe14a879d10d7c2d5331eb5ddb 418 PANTHER PTHR30629 1 393 4.0E-82 T 22-04-2016 RMET_RS07375 1d2856fe14a879d10d7c2d5331eb5ddb 418 SUPERFAMILY SSF56349 98 385 7.65E-58 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS07375 1d2856fe14a879d10d7c2d5331eb5ddb 418 Pfam PF00589 Phage integrase family 204 375 2.4E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS07375 1d2856fe14a879d10d7c2d5331eb5ddb 418 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 148 7.2E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS07375 1d2856fe14a879d10d7c2d5331eb5ddb 418 Gene3D G3DSA:1.10.443.10 202 382 1.8E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS07375 1d2856fe14a879d10d7c2d5331eb5ddb 418 Pfam PF13356 Domain of unknown function (DUF4102) 2 88 1.5E-15 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RMET_RS07375 1d2856fe14a879d10d7c2d5331eb5ddb 418 Gene3D G3DSA:1.10.150.130 98 189 1.8E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS07375 1d2856fe14a879d10d7c2d5331eb5ddb 418 PANTHER PTHR30629:SF2 1 393 4.0E-82 T 22-04-2016 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 SUPERFAMILY SSF56176 5 223 2.77E-79 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 Pfam PF02913 FAD linked oxidases, C-terminal domain 223 473 1.6E-49 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 SUPERFAMILY SSF55103 226 474 2.94E-56 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 PANTHER PTHR11748:SF76 1 474 8.3E-196 T 22-04-2016 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 Gene3D G3DSA:3.30.43.10 3 101 8.4E-30 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 PANTHER PTHR11748 1 474 8.3E-196 T 22-04-2016 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 Pfam PF01565 FAD binding domain 42 183 7.6E-38 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 Gene3D G3DSA:3.30.465.10 102 223 1.7E-38 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS05675 d87616679a7767e236a38ca55e8cf5e9 474 Gene3D G3DSA:1.10.45.10 434 473 8.2E-14 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01131 DNA topoisomerase 151 594 5.7E-113 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 653 6.4E-215 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 SUPERFAMILY SSF56712 1 608 7.85E-178 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:1.10.290.10 281 408 1.7E-33 T 22-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 SMART SM00493 1 122 2.7E-25 T 22-04-2016 IPR006171 Toprim domain RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 SUPERFAMILY SSF57783 622 656 1.67E-9 T 22-04-2016 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01751 Toprim domain 3 128 1.4E-16 T 22-04-2016 IPR006171 Toprim domain RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 SMART SM00437 271 561 1.8E-61 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 623 657 8.7E-10 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:1.10.460.10 152 211 1.3E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:1.10.460.10 477 608 1.3E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 PANTHER PTHR11390 1 506 2.0E-161 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 PANTHER PTHR11390 524 670 2.0E-161 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:3.40.50.140 1 147 3.8E-47 T 22-04-2016 IPR006171 Toprim domain RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 SMART SM00436 122 217 1.9E-35 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:3.30.65.10 623 657 1.3E-9 T 22-04-2016 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 6.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 6.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 6.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 524 538 6.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS11540 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 6.0E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 SMART SM00862 145 216 2.3E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 SUPERFAMILY SSF52172 1 132 1.85E-34 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 SUPERFAMILY SSF46894 119 216 5.26E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 PANTHER PTHR26402 1 217 2.4E-79 T 22-04-2016 RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.1E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 Pfam PF00072 Response regulator receiver domain 3 112 9.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 Gene3D G3DSA:1.10.10.10 123 216 2.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 SMART SM00448 1 112 2.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 PANTHER PTHR26402:SF279 1 217 2.4E-79 T 22-04-2016 RMET_RS11955 9c22177431f6992f6863b0a2bd83a211 222 Gene3D G3DSA:3.40.50.2300 1 122 2.4E-33 T 22-04-2016 RMET_RS13440 801daa9c4a49c86b9a3843bdbadecb02 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 143 1.0E-27 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RMET_RS13440 801daa9c4a49c86b9a3843bdbadecb02 145 PANTHER PTHR30558:SF7 1 141 2.8E-34 T 22-04-2016 RMET_RS13440 801daa9c4a49c86b9a3843bdbadecb02 145 TIGRFAM TIGR02801 tolR: protein TolR 15 142 4.5E-41 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 RMET_RS13440 801daa9c4a49c86b9a3843bdbadecb02 145 PANTHER PTHR30558 1 141 2.8E-34 T 22-04-2016 RMET_RS11475 5230df7d3216e01afbe8419a9e3a9237 393 PANTHER PTHR16254 1 393 7.3E-209 T 22-04-2016 RMET_RS11475 5230df7d3216e01afbe8419a9e3a9237 393 Pfam PF00999 Sodium/hydrogen exchanger family 12 389 4.0E-78 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RMET_RS11475 5230df7d3216e01afbe8419a9e3a9237 393 PANTHER PTHR16254:SF17 1 393 7.3E-209 T 22-04-2016 RMET_RS09170 680dbd44ee5338396965a579cba96791 284 PANTHER PTHR17985 2 257 6.6E-75 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 RMET_RS09170 680dbd44ee5338396965a579cba96791 284 Pfam PF05742 Transport and Golgi organisation 2 1 257 1.5E-67 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 RMET_RS09170 680dbd44ee5338396965a579cba96791 284 PANTHER PTHR17985:SF8 2 257 6.6E-75 T 22-04-2016 RMET_RS14975 d6f7615323547e360b22ee3bbbe6a393 300 PANTHER PTHR21091:SF121 140 208 5.2E-18 T 22-04-2016 RMET_RS14975 d6f7615323547e360b22ee3bbbe6a393 300 Pfam PF02219 Methylenetetrahydrofolate reductase 56 234 1.6E-9 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RMET_RS14975 d6f7615323547e360b22ee3bbbe6a393 300 SUPERFAMILY SSF51730 21 285 2.75E-44 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RMET_RS14975 d6f7615323547e360b22ee3bbbe6a393 300 Gene3D G3DSA:3.20.20.220 20 285 2.0E-36 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RMET_RS14975 d6f7615323547e360b22ee3bbbe6a393 300 PANTHER PTHR21091 140 208 5.2E-18 T 22-04-2016 RMET_RS10175 1a0eba8411ede1f74453e315e7d0572f 162 SUPERFAMILY SSF74942 75 150 8.5E-14 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RMET_RS10175 1a0eba8411ede1f74453e315e7d0572f 162 Pfam PF02576 Putative ribosome maturation factor RimP 6 146 6.7E-35 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RMET_RS10175 1a0eba8411ede1f74453e315e7d0572f 162 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 150 21.077 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RMET_RS10175 1a0eba8411ede1f74453e315e7d0572f 162 PANTHER PTHR33867 3 147 4.6E-30 T 22-04-2016 RMET_RS10175 1a0eba8411ede1f74453e315e7d0572f 162 SUPERFAMILY SSF75420 3 74 7.72E-14 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RMET_RS10175 1a0eba8411ede1f74453e315e7d0572f 162 Gene3D G3DSA:3.30.300.70 3 71 5.2E-15 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RMET_RS10175 1a0eba8411ede1f74453e315e7d0572f 162 PANTHER PTHR33867:SF1 3 147 4.6E-30 T 22-04-2016 RMET_RS10175 1a0eba8411ede1f74453e315e7d0572f 162 Gene3D G3DSA:2.30.30.180 78 147 1.3E-11 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 Pfam PF01037 Lrp/AsnC ligand binding domain 72 139 7.9E-16 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 SMART SM00344 4 110 6.8E-25 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 PANTHER PTHR30154 1 147 1.3E-36 T 22-04-2016 RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.8E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.8E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.8E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 9.4E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 SUPERFAMILY SSF54909 66 145 5.36E-16 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 SUPERFAMILY SSF46785 4 59 2.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 Gene3D G3DSA:3.30.70.920 68 139 1.2E-18 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS16090 5772116030edf52e636bb2ac73088c59 149 Gene3D G3DSA:1.10.10.10 1 54 6.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17360 fde90a2029426aa6da9fe5507f8b445e 145 SUPERFAMILY SSF54534 58 135 1.44E-19 T 22-04-2016 RMET_RS17360 fde90a2029426aa6da9fe5507f8b445e 145 PANTHER PTHR30437 12 143 4.3E-41 T 22-04-2016 RMET_RS17360 fde90a2029426aa6da9fe5507f8b445e 145 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 59 134 3.9E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RMET_RS17360 fde90a2029426aa6da9fe5507f8b445e 145 PANTHER PTHR30437:SF5 12 143 4.3E-41 T 22-04-2016 RMET_RS17360 fde90a2029426aa6da9fe5507f8b445e 145 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 98 114 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RMET_RS17360 fde90a2029426aa6da9fe5507f8b445e 145 Gene3D G3DSA:3.10.50.30 55 144 2.4E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1057 1239 2.3E-16 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 SMART SM01360 1297 1387 1.8E-20 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 Gene3D G3DSA:2.60.40.920 946 1033 6.6E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 PANTHER PTHR40094 873 1133 6.1E-61 T 22-04-2016 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 PANTHER PTHR40094 493 853 6.1E-61 T 22-04-2016 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 PANTHER PTHR40094 1169 1993 6.1E-61 T 22-04-2016 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 537 656 1.1E-32 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 Pfam PF01835 MG2 domain 664 765 1.5E-22 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 PANTHER PTHR40094:SF1 873 1133 6.1E-61 T 22-04-2016 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 PANTHER PTHR40094:SF1 493 853 6.1E-61 T 22-04-2016 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 PANTHER PTHR40094:SF1 1169 1993 6.1E-61 T 22-04-2016 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 SMART SM01359 1056 1239 8.1E-44 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RMET_RS17740 cf535c92ec77ef1bdea619a1f98b46dd 1993 Pfam PF00207 Alpha-2-macroglobulin family 1299 1385 3.6E-9 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 Pfam PF01515 Phosphate acetyl/butaryl transferase 453 766 9.6E-98 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 Gene3D G3DSA:3.40.50.720 177 459 2.1E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 Gene3D G3DSA:3.40.50.10750 596 742 4.1E-51 T 22-04-2016 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 PANTHER PTHR23406 48 450 4.6E-160 T 22-04-2016 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 SUPERFAMILY SSF53659 446 770 4.52E-91 T 22-04-2016 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 Pfam PF03949 Malic enzyme, NAD binding domain 181 375 1.1E-21 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 Pfam PF12434 Malate dehydrogenase enzyme 1 32 7.5E-20 T 22-04-2016 IPR032683 Malate dehydrogenase enzyme, N-terminal RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 Pfam PF00390 Malic enzyme, N-terminal domain 35 167 1.8E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 SMART SM01274 34 167 1.6E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 Gene3D G3DSA:3.40.50.10380 25 176 1.5E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 SUPERFAMILY SSF51735 179 456 3.29E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 SUPERFAMILY SSF53223 26 177 1.87E-52 T 22-04-2016 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 SMART SM00919 179 416 3.3E-134 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RMET_RS15265 806fda43b1e572ceb76866cde088b3ab 774 PIRSF PIRSF036684 14 774 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 Pfam PF01197 Ribosomal protein L31 1 78 8.1E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 PANTHER PTHR33280 1 78 7.8E-33 T 22-04-2016 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 SUPERFAMILY SSF143800 1 78 1.02E-23 T 22-04-2016 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.5E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.672 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 3.4E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.4E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 3.4E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10700 ce78040d009dbd8bc978bd4aabdc7d32 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS17645 f9eec9c6567bef8cdf322b2188064182 350 PANTHER PTHR11795:SF402 120 350 1.9E-139 T 22-04-2016 RMET_RS17645 f9eec9c6567bef8cdf322b2188064182 350 PANTHER PTHR11795:SF402 1 57 1.9E-139 T 22-04-2016 RMET_RS17645 f9eec9c6567bef8cdf322b2188064182 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 335 1.1E-18 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS17645 f9eec9c6567bef8cdf322b2188064182 350 PANTHER PTHR11795 120 350 1.9E-139 T 22-04-2016 RMET_RS17645 f9eec9c6567bef8cdf322b2188064182 350 PANTHER PTHR11795 1 57 1.9E-139 T 22-04-2016 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 SUPERFAMILY SSF55073 493 649 9.42E-45 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 Gene3D G3DSA:3.30.450.20 358 475 1.0E-14 T 22-04-2016 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 484 646 4.6E-40 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 SUPERFAMILY SSF55785 355 475 1.61E-14 T 22-04-2016 IPR000014 PAS domain RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 Gene3D G3DSA:3.30.450.20 83 176 1.6E-14 T 22-04-2016 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 Pfam PF00672 HAMP domain 281 349 5.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 Pfam PF02743 Cache domain 40 218 7.6E-12 T 22-04-2016 IPR033479 Double Cache domain 1 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 Pfam PF08448 PAS fold 374 476 8.9E-10 T 22-04-2016 IPR013656 PAS fold-4 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 SMART SM00267 477 650 4.9E-51 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 476 2.6E-13 T 22-04-2016 IPR000014 PAS domain RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 SMART SM00091 367 433 2.5E-6 T 22-04-2016 IPR000014 PAS domain RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 SMART SM00304 300 353 0.001 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 Gene3D G3DSA:3.30.70.270 491 650 5.3E-52 T 22-04-2016 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 SUPERFAMILY SSF158472 300 350 6.28E-5 T 22-04-2016 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 PANTHER PTHR10799:SF774 378 644 1.1E-28 T 22-04-2016 RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 490 644 1.4E-44 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11180 7423a17497defbf3a77ae27380bfa6b0 662 PANTHER PTHR10799 378 644 1.1E-28 T 22-04-2016 RMET_RS14695 ca9ab394f48cc03135a02ffc81ac0c45 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 131 3.1E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RMET_RS14695 ca9ab394f48cc03135a02ffc81ac0c45 139 SUPERFAMILY SSF54593 17 137 1.75E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS14695 ca9ab394f48cc03135a02ffc81ac0c45 139 PANTHER PTHR33993 1 136 7.1E-28 T 22-04-2016 RMET_RS14695 ca9ab394f48cc03135a02ffc81ac0c45 139 PANTHER PTHR33993:SF4 1 136 7.1E-28 T 22-04-2016 RMET_RS14695 ca9ab394f48cc03135a02ffc81ac0c45 139 Gene3D G3DSA:3.10.180.10 22 137 2.6E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 302 29.903 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 PANTHER PTHR30349:SF5 11 301 1.2E-102 T 22-04-2016 RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 14 301 1.0E-110 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 SUPERFAMILY SSF56349 12 294 4.12E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 Gene3D G3DSA:1.10.150.130 11 102 1.8E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 4.2E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 Pfam PF00589 Phage integrase family 116 287 8.1E-49 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 59.019 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 PANTHER PTHR30349 11 301 1.2E-102 T 22-04-2016 RMET_RS02625 f6b89579717ed51296f2b3b1ab00e9e1 302 Gene3D G3DSA:1.10.443.10 116 293 8.8E-56 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS00605 485cd3b773426c9fcbc7a3021fc53b8e 313 SUPERFAMILY SSF51735 99 278 7.41E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00605 485cd3b773426c9fcbc7a3021fc53b8e 313 PANTHER PTHR10996 15 308 3.9E-106 T 22-04-2016 RMET_RS00605 485cd3b773426c9fcbc7a3021fc53b8e 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 5.0E-44 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RMET_RS00605 485cd3b773426c9fcbc7a3021fc53b8e 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RMET_RS00605 485cd3b773426c9fcbc7a3021fc53b8e 313 Gene3D G3DSA:3.40.50.720 98 279 1.6E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00605 485cd3b773426c9fcbc7a3021fc53b8e 313 PANTHER PTHR10996:SF114 15 308 3.9E-106 T 22-04-2016 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 SUPERFAMILY SSF51735 3 168 1.53E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 PIRSF PIRSF000149 1 335 1.8E-131 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 2.7E-59 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.6E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.6E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.6E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.6E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.6E-45 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 PANTHER PTHR10836 1 331 1.8E-219 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 Gene3D G3DSA:3.30.360.10 161 316 1.5E-79 T 22-04-2016 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.3E-133 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 SMART SM00846 3 152 2.7E-95 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 Gene3D G3DSA:3.40.50.720 3 160 3.2E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 1.9E-66 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 SUPERFAMILY SSF55347 151 314 4.76E-72 T 22-04-2016 RMET_RS07620 2c1642cfc44ea54b4d5038c587009c9f 335 PANTHER PTHR10836:SF31 1 331 1.8E-219 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 SUPERFAMILY SSF81464 9 101 3.43E-27 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 SUPERFAMILY SSF49503 104 221 4.16E-40 T 22-04-2016 IPR008972 Cupredoxin RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 12 92 2.1E-14 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PANTHER PTHR22888 13 222 2.7E-85 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 Gene3D G3DSA:2.60.40.420 98 221 2.7E-40 T 22-04-2016 IPR008972 Cupredoxin RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PRINTS PR01166 Cytochrome c oxidase subunit II signature 103 122 1.6E-35 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PRINTS PR01166 Cytochrome c oxidase subunit II signature 81 101 1.6E-35 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PRINTS PR01166 Cytochrome c oxidase subunit II signature 215 222 1.6E-35 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PRINTS PR01166 Cytochrome c oxidase subunit II signature 153 174 1.6E-35 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PRINTS PR01166 Cytochrome c oxidase subunit II signature 177 197 1.6E-35 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PRINTS PR01166 Cytochrome c oxidase subunit II signature 69 81 1.6E-35 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 214 1.6E-35 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 20 221 1.1E-51 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 PANTHER PTHR22888:SF2 13 222 2.7E-85 T 22-04-2016 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 107 221 1.7E-33 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RMET_RS19405 0421b44a96136a336e99c3d690f38413 222 Gene3D G3DSA:1.10.287.90 12 97 9.5E-26 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 162 1.9E-9 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 SUPERFAMILY SSF52518 201 377 1.32E-30 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 237 355 2.9E-16 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 PANTHER PTHR18968 200 381 8.2E-35 T 22-04-2016 RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 TIGRFAM TIGR03297 Ppyr-DeCO2ase: phosphonopyruvate decarboxylase 15 383 4.4E-133 T 22-04-2016 IPR017684 Phosphonopyruvate decarboxylase GO:0032923|GO:0033980 KEGG: 00440+4.1.1.82|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7510 RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 Gene3D G3DSA:3.40.50.970 199 360 1.3E-25 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 254 273 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 Gene3D G3DSA:3.40.50.970 7 162 1.0E-8 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 SUPERFAMILY SSF52518 7 165 3.44E-14 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09055 0e024a76bd95adf399b489a07b8c0793 399 PANTHER PTHR18968:SF81 200 381 8.2E-35 T 22-04-2016 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 Gene3D G3DSA:3.30.565.10 316 464 1.4E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 310 9.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 2.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 2.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 2.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 2.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 Gene3D G3DSA:3.40.50.2300 493 610 1.0E-21 T 22-04-2016 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 Pfam PF00072 Response regulator receiver domain 495 603 3.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 SMART SM00448 493 605 1.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 PANTHER PTHR24423 40 48 2.5E-86 T 22-04-2016 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 PANTHER PTHR24423 225 609 2.5E-86 T 22-04-2016 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 SUPERFAMILY SSF55874 301 463 1.57E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 Gene3D G3DSA:1.10.287.130 238 307 1.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 SUPERFAMILY SSF47384 229 311 1.96E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 463 5.7E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 SMART SM00387 356 467 1.3E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 SUPERFAMILY SSF52172 494 609 1.42E-22 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS14445 a5cd9955644723a812b7dae7c924edce 612 SMART SM00388 246 311 6.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS09005 4a7e9dbf387074ad6321d047cd0adc0c 329 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 191 323 4.7E-22 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 RMET_RS09005 4a7e9dbf387074ad6321d047cd0adc0c 329 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 32 167 6.3E-24 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 RMET_RS09005 4a7e9dbf387074ad6321d047cd0adc0c 329 PANTHER PTHR36929 4 174 4.1E-29 T 22-04-2016 RMET_RS09005 4a7e9dbf387074ad6321d047cd0adc0c 329 SUPERFAMILY SSF55961 22 169 6.72E-38 T 22-04-2016 RMET_RS09005 4a7e9dbf387074ad6321d047cd0adc0c 329 PANTHER PTHR36929:SF1 4 174 4.1E-29 T 22-04-2016 RMET_RS09005 4a7e9dbf387074ad6321d047cd0adc0c 329 Gene3D G3DSA:3.30.530.20 183 326 9.4E-31 T 22-04-2016 IPR023393 START-like domain RMET_RS09005 4a7e9dbf387074ad6321d047cd0adc0c 329 Gene3D G3DSA:3.30.530.20 14 169 4.6E-43 T 22-04-2016 IPR023393 START-like domain RMET_RS09005 4a7e9dbf387074ad6321d047cd0adc0c 329 SUPERFAMILY SSF55961 181 324 8.15E-32 T 22-04-2016 RMET_RS14765 97f6bfd9f5f0fffb37ffaf945cad9b15 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 6.7E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC RMET_RS14765 97f6bfd9f5f0fffb37ffaf945cad9b15 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 6.7E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC RMET_RS14765 97f6bfd9f5f0fffb37ffaf945cad9b15 108 PANTHER PTHR33909 1 108 1.2E-33 T 22-04-2016 RMET_RS14765 97f6bfd9f5f0fffb37ffaf945cad9b15 108 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 100 5.4E-29 T 22-04-2016 IPR003849 Preprotein translocase YajC RMET_RS14765 97f6bfd9f5f0fffb37ffaf945cad9b15 108 Pfam PF02699 Preprotein translocase subunit 21 97 2.2E-31 T 22-04-2016 IPR003849 Preprotein translocase YajC RMET_RS14765 97f6bfd9f5f0fffb37ffaf945cad9b15 108 PANTHER PTHR33909:SF1 1 108 1.2E-33 T 22-04-2016 RMET_RS14765 97f6bfd9f5f0fffb37ffaf945cad9b15 108 SMART SM01323 18 100 7.6E-49 T 22-04-2016 IPR003849 Preprotein translocase YajC RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 854 0.0 T 22-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 Gene3D G3DSA:3.30.470.20 201 320 1.8E-26 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 Gene3D G3DSA:3.30.470.20 383 442 1.8E-26 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 204 287 1.0E-7 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 PANTHER PTHR23135 376 839 6.7E-114 T 22-04-2016 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 SUPERFAMILY SSF53244 711 838 2.75E-26 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 Pfam PF02875 Mur ligase family, glutamate ligase domain 711 791 5.1E-12 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 Pfam PF08245 Mur ligase middle domain 475 686 2.1E-20 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 SMART SM01209 203 418 0.0074 T 22-04-2016 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 Gene3D G3DSA:3.40.1190.10 469 703 3.0E-37 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 PANTHER PTHR23135:SF18 376 839 6.7E-114 T 22-04-2016 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 SUPERFAMILY SSF56059 204 334 2.36E-35 T 22-04-2016 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 SUPERFAMILY SSF56059 370 461 2.36E-35 T 22-04-2016 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 Gene3D G3DSA:3.90.190.20 713 838 1.1E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 473 496 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RMET_RS03540 54666011ec8443b9ea5477bf0f74e601 856 SUPERFAMILY SSF53623 433 723 7.98E-42 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS00215 31c5c26e4d20fc28bb3cab061583679c 203 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 18 201 4.3E-71 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RMET_RS00215 31c5c26e4d20fc28bb3cab061583679c 203 PIRSF PIRSF001296 14 203 1.4E-76 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RMET_RS00215 31c5c26e4d20fc28bb3cab061583679c 203 Pfam PF02669 K+-transporting ATPase, c chain 19 200 2.4E-74 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RMET_RS00215 31c5c26e4d20fc28bb3cab061583679c 203 PANTHER PTHR30042:SF2 12 203 2.3E-93 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RMET_RS00215 31c5c26e4d20fc28bb3cab061583679c 203 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 15 202 35.441 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RMET_RS00215 31c5c26e4d20fc28bb3cab061583679c 203 PANTHER PTHR30042 12 203 2.3E-93 T 22-04-2016 RMET_RS13840 c1cd16ee0cb37ad60f9c369b0c35d341 397 PANTHER PTHR30074:SF2 79 391 1.7E-77 T 22-04-2016 RMET_RS13840 c1cd16ee0cb37ad60f9c369b0c35d341 397 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 170 372 3.0E-48 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 RMET_RS13840 c1cd16ee0cb37ad60f9c369b0c35d341 397 SUPERFAMILY SSF81342 166 380 1.02E-44 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RMET_RS13840 c1cd16ee0cb37ad60f9c369b0c35d341 397 Gene3D G3DSA:1.20.950.20 166 380 3.1E-62 T 22-04-2016 RMET_RS13840 c1cd16ee0cb37ad60f9c369b0c35d341 397 Pfam PF01292 Prokaryotic cytochrome b561 172 350 1.8E-18 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RMET_RS13840 c1cd16ee0cb37ad60f9c369b0c35d341 397 PANTHER PTHR30074 79 391 1.7E-77 T 22-04-2016 RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 PANTHER PTHR11908:SF68 4 265 1.3E-69 T 22-04-2016 RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 PANTHER PTHR11908 4 265 1.3E-69 T 22-04-2016 RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 SMART SM01092 171 263 2.8E-18 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 167 6.1E-48 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 SUPERFAMILY SSF56176 1 167 7.94E-51 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 173 262 8.4E-5 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 Gene3D G3DSA:3.30.390.50 171 264 8.5E-16 T 22-04-2016 RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 Gene3D G3DSA:3.30.465.10 55 167 1.3E-33 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 Gene3D G3DSA:3.30.43.10 1 51 6.8E-19 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS01840 24ea2491c9fa271794b7dd07e857e771 266 SUPERFAMILY SSF55447 170 265 9.55E-19 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RMET_RS08730 9bc702cbc5cfa74670d85e104cfd9e4c 285 SUPERFAMILY SSF46689 226 271 1.25E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08730 9bc702cbc5cfa74670d85e104cfd9e4c 285 SMART SM00342 189 271 2.6E-10 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS08730 9bc702cbc5cfa74670d85e104cfd9e4c 285 Gene3D G3DSA:1.10.10.60 239 271 2.1E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08730 9bc702cbc5cfa74670d85e104cfd9e4c 285 Pfam PF12833 Helix-turn-helix domain 195 269 6.1E-13 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 133 205 1.6E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 218 293 1.4E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 SUPERFAMILY SSF46626 218 298 2.29E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 PIRSF PIRSF000006 5 300 3.6E-107 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 PANTHER PTHR33751 29 303 5.8E-82 T 22-04-2016 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 SUPERFAMILY SSF46626 111 211 8.73E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 SUPERFAMILY SSF46626 60 83 8.73E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 87 3.5E-23 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 35 298 1.3E-87 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 PANTHER PTHR33751:SF1 29 303 5.8E-82 T 22-04-2016 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 Gene3D G3DSA:1.10.760.10 126 211 2.2E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 Gene3D G3DSA:1.10.760.10 213 299 4.2E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10210 4fb85387fa3d9aeb0367d509eb2ce3e2 304 Gene3D G3DSA:1.10.760.10 65 87 2.2E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Gene3D G3DSA:1.10.150.310 511 642 1.2E-46 T 22-04-2016 IPR023097 Tex RuvX-like domain RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Pfam PF00575 S1 RNA binding domain 661 732 6.8E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Pfam PF12836 Helix-hairpin-helix motif 503 567 1.3E-28 T 22-04-2016 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Gene3D G3DSA:1.10.3500.10 117 333 5.9E-102 T 22-04-2016 IPR023323 Tex-like domain RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Gene3D G3DSA:1.10.3500.10 463 510 5.9E-102 T 22-04-2016 IPR023323 Tex-like domain RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Gene3D G3DSA:3.30.420.140 337 462 1.3E-51 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 SUPERFAMILY SSF158832 9 332 6.54E-117 T 22-04-2016 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 SUPERFAMILY SSF47781 482 570 2.15E-29 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Gene3D G3DSA:1.10.10.650 9 115 2.2E-47 T 22-04-2016 IPR023319 Tex-like protein, HTH domain RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 SUPERFAMILY SSF50249 649 734 2.69E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 SUPERFAMILY SSF47781 572 644 2.67E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 PANTHER PTHR10724 10 776 0.0 T 22-04-2016 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 SMART SM00732 337 436 7.4E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Pfam PF09371 Tex-like protein N-terminal domain 16 204 3.8E-71 T 22-04-2016 IPR018974 Tex-like protein, N-terminal RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 PANTHER PTHR10724:SF1 10 776 0.0 T 22-04-2016 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Gene3D G3DSA:2.40.50.140 645 732 3.1E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 Pfam PF16921 Tex protein YqgF-like domain 337 463 5.3E-53 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 SUPERFAMILY SSF53098 333 481 3.72E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06220 2739a8935054e83a6e213b7a07d716ef 787 SMART SM00316 661 732 9.6E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 2.7E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 SUPERFAMILY SSF46894 132 205 4.76E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 SMART SM00421 143 200 3.8E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 Gene3D G3DSA:1.10.10.10 119 205 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 SUPERFAMILY SSF52172 3 125 1.27E-18 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 SMART SM00448 2 114 3.3E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 PANTHER PTHR26402 2 202 7.9E-35 T 22-04-2016 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 Gene3D G3DSA:3.40.50.2300 3 118 1.9E-21 T 22-04-2016 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 Pfam PF00072 Response regulator receiver domain 5 112 1.8E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS02325 24a3b21d2cb59ef216d9d1d7072c925e 207 PANTHER PTHR26402:SF151 2 202 7.9E-35 T 22-04-2016 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 Gene3D G3DSA:3.30.870.10 67 238 2.2E-42 T 22-04-2016 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 Gene3D G3DSA:3.30.870.10 285 445 5.0E-35 T 22-04-2016 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 SMART SM00155 363 390 0.011 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 SMART SM00155 169 196 3.5E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 SUPERFAMILY SSF56024 264 433 1.64E-34 T 22-04-2016 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 PANTHER PTHR21248:SF5 67 458 9.6E-87 T 22-04-2016 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 SUPERFAMILY SSF56024 52 236 2.47E-45 T 22-04-2016 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 Hamap MF_01917 Cardiolipin synthase B [clsB]. 64 461 46.764 T 22-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 PANTHER PTHR21248 67 458 9.6E-87 T 22-04-2016 RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 Pfam PF13091 PLD-like domain 293 415 2.2E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain RMET_RS01940 497d0f1e6c2a3a6b5fd2267f74e2eced 461 Pfam PF13091 PLD-like domain 86 194 6.0E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 PANTHER PTHR11236:SF18 136 499 3.3E-123 T 22-04-2016 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 SUPERFAMILY SSF56322 46 416 7.46E-99 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 PANTHER PTHR11236 136 499 3.3E-123 T 22-04-2016 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 PRINTS PR00095 Anthranilate synthase component I signature 337 351 1.2E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 PRINTS PR00095 Anthranilate synthase component I signature 257 270 1.2E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 PRINTS PR00095 Anthranilate synthase component I signature 243 256 1.2E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 Pfam PF01063 Amino-transferase class IV 424 630 4.7E-33 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 Gene3D G3DSA:3.30.470.10 421 483 6.6E-8 T 22-04-2016 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 Gene3D G3DSA:3.20.10.10 509 624 1.2E-24 T 22-04-2016 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 Gene3D G3DSA:3.60.120.10 68 416 2.3E-117 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 Pfam PF00425 chorismate binding enzyme 140 410 5.3E-81 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 SUPERFAMILY SSF56752 365 627 7.85E-51 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS14635 b181ac2ef8e6571c1af54c32b74786a5 631 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 100 415 2.3E-100 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 Gene3D G3DSA:3.40.190.10 199 248 2.2E-6 T 22-04-2016 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 PANTHER PTHR30579:SF0 1 293 2.1E-44 T 22-04-2016 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 PANTHER PTHR30579 1 293 2.1E-44 T 22-04-2016 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 Gene3D G3DSA:3.40.190.10 88 198 2.4E-13 T 22-04-2016 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 Pfam PF03466 LysR substrate binding domain 88 280 1.6E-21 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 SUPERFAMILY SSF46785 4 110 3.63E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 9.0E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 Gene3D G3DSA:1.10.10.10 5 87 5.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS15415 03e191847fa693a0e8587296299c66d1 296 SUPERFAMILY SSF53850 83 274 6.33E-20 T 22-04-2016 RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 6.1E-32 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 19.599 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 6.5E-22 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 Pfam PF00467 KOW motif 6 34 4.6E-5 T 22-04-2016 IPR005824 KOW RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 SMART SM00739 3 30 1.2E-4 T 22-04-2016 IPR005824 KOW RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 SUPERFAMILY SSF50104 3 98 1.43E-28 T 22-04-2016 IPR008991 Translation protein SH3-like domain RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 PANTHER PTHR12903 3 100 8.9E-39 T 22-04-2016 RMET_RS16580 5aade478099821c5e984215214f4ebb8 102 Gene3D G3DSA:2.30.30.30 3 89 4.4E-20 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 SUPERFAMILY SSF55920 4 255 2.75E-88 T 22-04-2016 IPR000994 Peptidase M24, structural domain RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 Pfam PF00557 Metallopeptidase family M24 13 247 9.9E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 PANTHER PTHR10804 1 257 6.8E-143 T 22-04-2016 RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 PANTHER PTHR10804:SF75 1 257 6.8E-143 T 22-04-2016 RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 1.1E-15 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 1.1E-15 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 1.1E-15 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 1.1E-15 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 41.124 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 255 3.2E-95 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RMET_RS07225 05b4f52cad8ed619b94520f4b91e764a 272 Gene3D G3DSA:3.90.230.10 4 256 2.6E-95 T 22-04-2016 IPR000994 Peptidase M24, structural domain RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 PANTHER PTHR23135 389 858 6.1E-72 T 22-04-2016 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 PANTHER PTHR23135:SF18 389 858 6.1E-72 T 22-04-2016 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 SUPERFAMILY SSF53623 485 723 5.34E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 Pfam PF08245 Mur ligase middle domain 491 705 3.6E-12 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 SUPERFAMILY SSF53244 730 858 2.38E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 SUPERFAMILY SSF56059 219 481 2.41E-30 T 22-04-2016 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 7 873 0.0 T 22-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 219 304 3.4E-7 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 Gene3D G3DSA:3.40.1190.10 485 723 6.3E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 Pfam PF02875 Mur ligase family, glutamate ligase domain 730 808 2.6E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 Gene3D G3DSA:3.30.470.20 395 449 7.7E-24 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 Gene3D G3DSA:3.30.470.20 217 338 7.7E-24 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS03545 96a396f21b51b94a2cc1e5b718bc891e 883 Gene3D G3DSA:3.90.190.20 733 859 1.4E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 SUPERFAMILY SSF51366 6 214 3.97E-71 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 8 213 2.8E-94 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 Pfam PF00834 Ribulose-phosphate 3 epimerase family 8 208 6.6E-90 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 PANTHER PTHR11749:SF7 5 233 4.7E-122 T 22-04-2016 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 PIRSF PIRSF001461 2 231 4.2E-100 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 PANTHER PTHR11749 5 233 4.7E-122 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 Gene3D G3DSA:3.20.20.70 5 228 4.2E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS15925 415f27e4accb7153680bcc050b1a7090 233 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 35 49 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 5.2E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 5.2E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 5.2E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 5.2E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 5.2E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 SUPERFAMILY SSF53067 9 153 1.04E-36 T 22-04-2016 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 Pfam PF06723 MreB/Mbl protein 10 340 6.6E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 PANTHER PTHR19375:SF117 9 332 3.5E-178 T 22-04-2016 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 1.8E-156 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 Gene3D G3DSA:3.30.420.40 268 322 3.1E-33 T 22-04-2016 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 Gene3D G3DSA:3.30.420.40 165 191 3.1E-33 T 22-04-2016 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 SUPERFAMILY SSF53067 154 339 1.45E-48 T 22-04-2016 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 PANTHER PTHR19375 9 332 3.5E-178 T 22-04-2016 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 Gene3D G3DSA:3.30.420.40 10 164 2.1E-44 T 22-04-2016 RMET_RS00270 7d03da0a00383087a4de627c87cf625a 347 Gene3D G3DSA:3.90.640.10 192 264 3.1E-30 T 22-04-2016 RMET_RS01045 9d51485372677b03b043c1dd3002f9f5 443 Gene3D G3DSA:3.90.1150.10 345 442 2.7E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS01045 9d51485372677b03b043c1dd3002f9f5 443 Gene3D G3DSA:3.90.1150.10 10 63 2.7E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS01045 9d51485372677b03b043c1dd3002f9f5 443 Gene3D G3DSA:3.40.640.10 65 344 1.3E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS01045 9d51485372677b03b043c1dd3002f9f5 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS01045 9d51485372677b03b043c1dd3002f9f5 443 PANTHER PTHR11986 1 442 1.0E-236 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS01045 9d51485372677b03b043c1dd3002f9f5 443 PANTHER PTHR11986:SF80 1 442 1.0E-236 T 22-04-2016 RMET_RS01045 9d51485372677b03b043c1dd3002f9f5 443 Pfam PF00202 Aminotransferase class-III 21 439 2.0E-106 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS01045 9d51485372677b03b043c1dd3002f9f5 443 SUPERFAMILY SSF53383 8 440 7.29E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 SUPERFAMILY SSF46894 167 234 1.46E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 Gene3D G3DSA:1.10.10.10 179 233 7.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 173 225 1.3E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 ProSitePatterns PS00622 LuxR-type HTH domain signature. 188 215 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 PANTHER PTHR26402 15 234 7.7E-43 T 22-04-2016 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 PANTHER PTHR26402:SF151 15 234 7.7E-43 T 22-04-2016 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 Pfam PF00072 Response regulator receiver domain 18 128 3.0E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 8.7E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 8.7E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 8.7E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 SMART SM00448 15 129 2.5E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 SMART SM00421 171 228 1.3E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 SUPERFAMILY SSF52172 17 141 2.7E-25 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS03095 0845087a7615dcf87f26fa1bb4325bec 235 Gene3D G3DSA:3.40.50.2300 17 178 1.5E-25 T 22-04-2016 RMET_RS09510 602bea7a751ae215861467334bf465da 471 Pfam PF00171 Aldehyde dehydrogenase family 14 468 2.8E-149 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS09510 602bea7a751ae215861467334bf465da 471 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RMET_RS09510 602bea7a751ae215861467334bf465da 471 PANTHER PTHR11699 7 470 2.7E-180 T 22-04-2016 RMET_RS09510 602bea7a751ae215861467334bf465da 471 Gene3D G3DSA:3.40.309.10 256 444 4.7E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS09510 602bea7a751ae215861467334bf465da 471 Gene3D G3DSA:3.40.605.10 6 255 6.5E-73 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS09510 602bea7a751ae215861467334bf465da 471 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RMET_RS09510 602bea7a751ae215861467334bf465da 471 SUPERFAMILY SSF53720 3 469 2.75E-147 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 PRINTS PR01100 Shikimate kinase family signature 172 185 4.9E-11 T 22-04-2016 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 PRINTS PR01100 Shikimate kinase family signature 200 208 4.9E-11 T 22-04-2016 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 PRINTS PR01100 Shikimate kinase family signature 219 228 4.9E-11 T 22-04-2016 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 PRINTS PR01100 Shikimate kinase family signature 148 163 4.9E-11 T 22-04-2016 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 SMART SM00530 33 88 4.9E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 Pfam PF13560 Helix-turn-helix domain 30 86 1.8E-11 T 22-04-2016 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 SUPERFAMILY SSF52540 146 307 5.12E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 Gene3D G3DSA:3.40.50.300 145 311 3.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 PANTHER PTHR21087 143 300 2.3E-35 T 22-04-2016 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 Hamap MF_00109 Shikimate kinase [aroK]. 145 312 20.299 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 PANTHER PTHR21087:SF0 143 300 2.3E-35 T 22-04-2016 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 SUPERFAMILY SSF47413 26 93 9.01E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 Gene3D G3DSA:1.10.260.40 30 95 4.7E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS06175 0820961400b7ceb1f0f3bff62b21d34e 316 Pfam PF01202 Shikimate kinase 154 303 2.3E-31 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 PANTHER PTHR11404 1 192 3.9E-113 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 Gene3D G3DSA:1.10.287.990 20 82 9.3E-27 T 22-04-2016 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 SUPERFAMILY SSF54719 81 191 1.7E-46 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 SUPERFAMILY SSF46609 1 84 3.67E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 9.3E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 9.3E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 9.3E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 9.3E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 9.3E-24 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 2.3E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 PANTHER PTHR11404:SF8 1 192 3.9E-113 T 22-04-2016 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 2.2E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS02725 35826970174d3c8f034bc0d5ab2e189f 192 PIRSF PIRSF000349 1 192 8.6E-90 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 PANTHER PTHR21631:SF1 1 527 5.9E-263 T 22-04-2016 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 PIRSF PIRSF001363 1 527 9.2E-245 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 Gene3D G3DSA:3.20.20.360 71 406 1.1E-111 T 22-04-2016 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 Gene3D G3DSA:1.20.1220.12 411 521 8.5E-32 T 22-04-2016 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 PANTHER PTHR21631 1 527 5.9E-263 T 22-04-2016 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 Pfam PF01274 Malate synthase 10 527 2.3E-196 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 SUPERFAMILY SSF51645 5 527 1.83E-185 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RMET_RS07005 8ebedec16f267d3a731f772deac1d4ca 527 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 22 527 2.9E-224 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 SUPERFAMILY SSF50800 71 164 1.13E-25 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 Gene3D G3DSA:3.20.20.60 168 330 5.4E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 Gene3D G3DSA:3.20.20.60 3 73 5.4E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 PANTHER PTHR11817:SF17 1 477 3.1E-230 T 22-04-2016 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 SUPERFAMILY SSF51621 166 342 3.49E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 SUPERFAMILY SSF51621 2 76 3.49E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 2.0E-114 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 217 229 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 Gene3D G3DSA:3.40.1380.20 331 476 2.6E-40 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 SUPERFAMILY SSF52935 327 477 4.19E-39 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 Gene3D G3DSA:2.40.33.10 74 167 8.5E-28 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 474 1.1E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 PANTHER PTHR11817 1 477 3.1E-230 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 6.2E-153 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 PRINTS PR01050 Pyruvate kinase family signature 317 333 4.2E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 PRINTS PR01050 Pyruvate kinase family signature 273 297 4.2E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 PRINTS PR01050 Pyruvate kinase family signature 248 272 4.2E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 PRINTS PR01050 Pyruvate kinase family signature 298 316 4.2E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 PRINTS PR01050 Pyruvate kinase family signature 60 76 4.2E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS02540 c7a18b767046e92ca2bc89511cf1a52d 479 PRINTS PR01050 Pyruvate kinase family signature 185 199 4.2E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05450 f78fdfdfdb34c75a34984ce31515f7b6 241 Gene3D G3DSA:1.25.40.10 66 193 1.5E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS05450 f78fdfdfdb34c75a34984ce31515f7b6 241 PANTHER PTHR23083 74 200 1.8E-15 T 22-04-2016 RMET_RS05450 f78fdfdfdb34c75a34984ce31515f7b6 241 SUPERFAMILY SSF48452 55 193 4.61E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS05450 f78fdfdfdb34c75a34984ce31515f7b6 241 Pfam PF13432 Tetratricopeptide repeat 69 123 5.0E-7 T 22-04-2016 RMET_RS04265 7b4b845e85dcd713bd183ca65b5455b7 172 PANTHER PTHR35603 8 170 1.4E-15 T 22-04-2016 RMET_RS04265 7b4b845e85dcd713bd183ca65b5455b7 172 Pfam PF05433 Glycine zipper 2TM domain 83 123 1.2E-11 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RMET_RS07645 dffd3b10435aa06552f71f2416eddd02 272 Pfam PF00121 Triosephosphate isomerase 19 260 2.0E-86 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS07645 dffd3b10435aa06552f71f2416eddd02 272 SUPERFAMILY SSF51351 16 261 2.36E-88 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS07645 dffd3b10435aa06552f71f2416eddd02 272 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 19 254 1.4E-68 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS07645 dffd3b10435aa06552f71f2416eddd02 272 ProSitePatterns PS00171 Triosephosphate isomerase active site. 180 190 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS07645 dffd3b10435aa06552f71f2416eddd02 272 Gene3D G3DSA:3.20.20.70 16 263 1.3E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS07645 dffd3b10435aa06552f71f2416eddd02 272 PANTHER PTHR21139 16 258 1.4E-112 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS07645 dffd3b10435aa06552f71f2416eddd02 272 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 16 264 39.638 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RMET_RS14920 d1e025d0ac297a6fcda4e3d0eb4a9b3b 143 Gene3D G3DSA:1.10.10.10 6 82 5.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14920 d1e025d0ac297a6fcda4e3d0eb4a9b3b 143 PANTHER PTHR33202 5 134 3.5E-39 T 22-04-2016 RMET_RS14920 d1e025d0ac297a6fcda4e3d0eb4a9b3b 143 Pfam PF01475 Ferric uptake regulator family 10 129 1.1E-45 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RMET_RS14920 d1e025d0ac297a6fcda4e3d0eb4a9b3b 143 SUPERFAMILY SSF46785 6 133 1.71E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS18140 a3a6cec14b1010570bce53aad0a42ed0 253 SMART SM00880 20 252 5.5E-19 T 22-04-2016 IPR007899 CHAD domain RMET_RS18140 a3a6cec14b1010570bce53aad0a42ed0 253 Pfam PF05235 CHAD domain 30 246 1.4E-28 T 22-04-2016 IPR007899 CHAD domain RMET_RS06945 98a16275efc44056b521258886fde077 367 SUPERFAMILY SSF52540 3 245 6.52E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06945 98a16275efc44056b521258886fde077 367 Pfam PF00005 ABC transporter 18 164 7.7E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS06945 98a16275efc44056b521258886fde077 367 PANTHER PTHR24220 4 250 1.8E-135 T 22-04-2016 RMET_RS06945 98a16275efc44056b521258886fde077 367 Pfam PF12857 TOBE-like domain 292 349 3.0E-17 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 RMET_RS06945 98a16275efc44056b521258886fde077 367 Gene3D G3DSA:3.40.50.300 2 239 6.9E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06945 98a16275efc44056b521258886fde077 367 SUPERFAMILY SSF50331 239 349 9.07E-8 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RMET_RS06945 98a16275efc44056b521258886fde077 367 SMART SM00382 27 214 2.5E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06945 98a16275efc44056b521258886fde077 367 PANTHER PTHR24220:SF123 4 250 1.8E-135 T 22-04-2016 RMET_RS06945 98a16275efc44056b521258886fde077 367 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 1.8E-119 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 SMART SM00382 65 200 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 355 182.664 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 PANTHER PTHR13779 3 345 9.1E-183 T 22-04-2016 RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 264 346 6.0E-42 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 SUPERFAMILY SSF46785 270 344 1.81E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 267 340 5.0E-32 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 Gene3D G3DSA:1.10.8.60 196 269 4.9E-33 T 22-04-2016 RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 Gene3D G3DSA:3.40.50.300 34 190 4.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 Gene3D G3DSA:1.10.10.10 271 341 5.8E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 PANTHER PTHR13779:SF25 3 345 9.1E-183 T 22-04-2016 RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 SUPERFAMILY SSF52540 34 265 2.65E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 23 249 3.4E-117 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RMET_RS02135 cb666425cf2456e176849aa63cbe2b63 355 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 38 340 7.4E-147 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RMET_RS08875 a1bdcee064ab69c959228c0110bb061e 181 Pfam PF00583 Acetyltransferase (GNAT) family 82 158 2.7E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS08875 a1bdcee064ab69c959228c0110bb061e 181 SUPERFAMILY SSF55729 17 160 1.08E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS08875 a1bdcee064ab69c959228c0110bb061e 181 Gene3D G3DSA:3.40.630.30 12 160 6.7E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS08875 a1bdcee064ab69c959228c0110bb061e 181 PANTHER PTHR33303 13 167 2.4E-12 T 22-04-2016 RMET_RS08875 a1bdcee064ab69c959228c0110bb061e 181 PANTHER PTHR33303:SF4 13 167 2.4E-12 T 22-04-2016 RMET_RS10225 98f78218a42350c112083be15a35fbf3 482 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 12 475 1.9E-238 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS10225 98f78218a42350c112083be15a35fbf3 482 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS10225 98f78218a42350c112083be15a35fbf3 482 PANTHER PTHR10422 11 472 1.5E-289 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS10225 98f78218a42350c112083be15a35fbf3 482 PANTHER PTHR10422:SF21 11 472 1.5E-289 T 22-04-2016 RMET_RS10225 98f78218a42350c112083be15a35fbf3 482 SUPERFAMILY SSF81442 14 471 5.36E-125 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS10225 98f78218a42350c112083be15a35fbf3 482 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 446 2.8E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS10225 98f78218a42350c112083be15a35fbf3 482 Gene3D G3DSA:1.20.210.10 16 470 1.0E-71 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS00070 8893e3d0930ea999aa661cf9b73cf739 464 Pfam PF01547 Bacterial extracellular solute-binding protein 80 349 3.6E-10 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 RMET_RS00070 8893e3d0930ea999aa661cf9b73cf739 464 PANTHER PTHR30061 9 464 1.4E-25 T 22-04-2016 RMET_RS00070 8893e3d0930ea999aa661cf9b73cf739 464 Gene3D G3DSA:3.40.190.10 193 349 7.8E-22 T 22-04-2016 RMET_RS00070 8893e3d0930ea999aa661cf9b73cf739 464 SUPERFAMILY SSF53850 58 456 3.26E-34 T 22-04-2016 RMET_RS00070 8893e3d0930ea999aa661cf9b73cf739 464 Gene3D G3DSA:3.40.190.10 75 192 6.6E-5 T 22-04-2016 RMET_RS00775 a9e5fb873bc2b25fabf162894121fb82 269 PIRSF PIRSF028756 2 267 8.1E-75 T 22-04-2016 IPR016898 Polyphosphate kinase 2 RMET_RS00775 a9e5fb873bc2b25fabf162894121fb82 269 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 31 248 1.3E-69 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RMET_RS00775 a9e5fb873bc2b25fabf162894121fb82 269 PANTHER PTHR34383 39 258 2.4E-96 T 22-04-2016 RMET_RS00775 a9e5fb873bc2b25fabf162894121fb82 269 SUPERFAMILY SSF52540 61 251 2.34E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00775 a9e5fb873bc2b25fabf162894121fb82 269 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 4 265 7.0E-112 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 RMET_RS00775 a9e5fb873bc2b25fabf162894121fb82 269 Gene3D G3DSA:3.40.50.300 3 265 2.4E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17685 6624085482e2866e4a24f005f174ae01 257 SUPERFAMILY SSF52540 5 247 1.38E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17685 6624085482e2866e4a24f005f174ae01 257 SMART SM00382 31 225 1.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS17685 6624085482e2866e4a24f005f174ae01 257 PANTHER PTHR24220:SF400 8 247 9.1E-122 T 22-04-2016 RMET_RS17685 6624085482e2866e4a24f005f174ae01 257 Gene3D G3DSA:3.40.50.300 3 245 4.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17685 6624085482e2866e4a24f005f174ae01 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 247 4.1E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS17685 6624085482e2866e4a24f005f174ae01 257 Pfam PF00005 ABC transporter 23 178 1.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS17685 6624085482e2866e4a24f005f174ae01 257 PANTHER PTHR24220 8 247 9.1E-122 T 22-04-2016 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 PIRSF PIRSF000137 1 549 3.9E-134 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 Pfam PF05199 GMC oxidoreductase 400 539 2.8E-36 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 PANTHER PTHR11552 1 544 1.8E-183 T 22-04-2016 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 Gene3D G3DSA:3.50.50.60 192 326 1.7E-109 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 Gene3D G3DSA:3.50.50.60 482 544 1.7E-109 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 Gene3D G3DSA:3.50.50.60 2 127 1.7E-109 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 SUPERFAMILY SSF51905 488 544 6.05E-82 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 SUPERFAMILY SSF51905 2 301 6.05E-82 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 SUPERFAMILY SSF54373 303 489 5.3E-47 T 22-04-2016 RMET_RS00810 432c8500d6bd0a6660c027cfbc30f40a 560 Pfam PF00732 GMC oxidoreductase 5 308 1.6E-79 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 Gene3D G3DSA:3.40.190.80 161 260 7.6E-36 T 22-04-2016 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 Pfam PF00459 Inositol monophosphatase family 2 255 2.2E-69 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 201 213 3.8E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 107 126 3.8E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 3.8E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 159 185 3.8E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 SUPERFAMILY SSF56655 1 263 9.29E-85 T 22-04-2016 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PANTHER PTHR20854 1 270 4.2E-103 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 Gene3D G3DSA:3.30.540.10 2 160 1.6E-56 T 22-04-2016 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PANTHER PTHR20854:SF4 1 270 4.2E-103 T 22-04-2016 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 1.6E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 1.6E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 1.6E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 1.6E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.6E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS05420 9130b2ff4ddf8a18c291ad2453e22031 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.6E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS05530 80f8adcd4d868e4d79b2ec74a823fc63 309 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 299 33.744 T 22-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RMET_RS05530 80f8adcd4d868e4d79b2ec74a823fc63 309 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 294 4.3E-67 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RMET_RS05530 80f8adcd4d868e4d79b2ec74a823fc63 309 PANTHER PTHR36445 1 309 1.9E-73 T 22-04-2016 RMET_RS05530 80f8adcd4d868e4d79b2ec74a823fc63 309 Gene3D G3DSA:3.10.270.10 198 296 3.3E-72 T 22-04-2016 RMET_RS05530 80f8adcd4d868e4d79b2ec74a823fc63 309 Gene3D G3DSA:3.10.270.10 4 165 3.3E-72 T 22-04-2016 RMET_RS05530 80f8adcd4d868e4d79b2ec74a823fc63 309 PANTHER PTHR36445:SF1 1 309 1.9E-73 T 22-04-2016 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 SUPERFAMILY SSF58014 28 121 7.59E-23 T 22-04-2016 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 PRINTS PR00773 GrpE protein signature 131 146 3.3E-25 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 PRINTS PR00773 GrpE protein signature 51 67 3.3E-25 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 PRINTS PR00773 GrpE protein signature 157 176 3.3E-25 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 PRINTS PR00773 GrpE protein signature 79 94 3.3E-25 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 Pfam PF01025 GrpE 23 177 3.8E-47 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 SUPERFAMILY SSF51064 125 178 5.49E-18 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 Gene3D G3DSA:2.30.22.10 124 178 1.5E-25 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 ProSitePatterns PS01071 grpE protein signature. 134 176 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 PANTHER PTHR21237 11 180 6.0E-56 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 Hamap MF_01151 Protein GrpE [grpE]. 2 178 19.189 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RMET_RS05050 b6b92fe208866eb6d03c1a8104f7d61f 180 Gene3D G3DSA:3.90.20.20 27 121 2.2E-27 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil RMET_RS13810 92ea71d36c9ac019149b8fec9ad96363 180 PANTHER PTHR35011:SF4 4 180 8.7E-63 T 22-04-2016 RMET_RS13810 92ea71d36c9ac019149b8fec9ad96363 180 PANTHER PTHR35011 4 180 8.7E-63 T 22-04-2016 RMET_RS13810 92ea71d36c9ac019149b8fec9ad96363 180 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 163 1.7E-28 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Pfam PF00072 Response regulator receiver domain 563 677 5.3E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 SMART SM00387 423 541 7.0E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 539 2.8E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 3.3E-28 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Gene3D G3DSA:3.30.565.10 381 539 1.8E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Gene3D G3DSA:3.40.50.2300 550 681 3.2E-31 T 22-04-2016 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 6.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 494 6.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 6.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 6.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 SUPERFAMILY SSF53850 41 266 6.79E-34 T 22-04-2016 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Gene3D G3DSA:3.40.190.10 124 219 3.4E-5 T 22-04-2016 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Gene3D G3DSA:3.40.190.10 37 123 5.7E-19 T 22-04-2016 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Gene3D G3DSA:3.40.190.10 224 262 5.7E-19 T 22-04-2016 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 SMART SM00448 561 677 4.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 SMART SM00388 312 377 7.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 SUPERFAMILY SSF47384 300 378 2.75E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Gene3D G3DSA:1.10.287.130 307 372 2.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 SMART SM00062 40 264 3.3E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 Pfam PF00512 His Kinase A (phospho-acceptor) domain 313 377 2.8E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 PANTHER PTHR24423 204 212 1.1E-118 T 22-04-2016 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 PANTHER PTHR24423 299 719 1.1E-118 T 22-04-2016 RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 SUPERFAMILY SSF55874 366 537 3.93E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10815 ed23b226a5c9d13cc86fa46c39c98541 797 SUPERFAMILY SSF52172 563 682 5.12E-30 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 PANTHER PTHR30154 1 157 3.2E-52 T 22-04-2016 RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 Pfam PF01037 Lrp/AsnC ligand binding domain 72 144 2.9E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 PANTHER PTHR30154:SF28 1 157 3.2E-52 T 22-04-2016 RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.6E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.6E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.6E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 SUPERFAMILY SSF54909 66 155 2.82E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 SUPERFAMILY SSF46785 6 65 4.66E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 Gene3D G3DSA:3.30.70.920 59 155 4.5E-28 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 3.3E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 Gene3D G3DSA:1.10.10.10 3 57 4.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17745 528b9445cc6a19da2a460e79f06083a5 159 SMART SM00344 6 115 1.3E-35 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RMET_RS01050 96af7e7fbe661842e162e0bafb46c98a 505 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 13 489 2.6E-215 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 RMET_RS01050 96af7e7fbe661842e162e0bafb46c98a 505 Gene3D G3DSA:3.40.605.10 12 268 1.7E-91 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS01050 96af7e7fbe661842e162e0bafb46c98a 505 Gene3D G3DSA:3.40.309.10 269 450 9.8E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS01050 96af7e7fbe661842e162e0bafb46c98a 505 PANTHER PTHR11699 1 493 6.2E-292 T 22-04-2016 RMET_RS01050 96af7e7fbe661842e162e0bafb46c98a 505 PANTHER PTHR11699:SF188 1 493 6.2E-292 T 22-04-2016 RMET_RS01050 96af7e7fbe661842e162e0bafb46c98a 505 SUPERFAMILY SSF53720 9 490 2.49E-154 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS01050 96af7e7fbe661842e162e0bafb46c98a 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RMET_RS01050 96af7e7fbe661842e162e0bafb46c98a 505 Pfam PF00171 Aldehyde dehydrogenase family 27 485 1.8E-146 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS04980 5f178a2138dca744e052159d21ce376f 351 PANTHER PTHR10108 130 290 3.9E-18 T 22-04-2016 RMET_RS04980 5f178a2138dca744e052159d21ce376f 351 SUPERFAMILY SSF46785 16 88 4.29E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04980 5f178a2138dca744e052159d21ce376f 351 Pfam PF13847 Methyltransferase domain 173 277 9.0E-16 T 22-04-2016 IPR025714 Methyltransferase domain RMET_RS04980 5f178a2138dca744e052159d21ce376f 351 SUPERFAMILY SSF53335 131 286 2.3E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS04980 5f178a2138dca744e052159d21ce376f 351 Gene3D G3DSA:1.10.10.10 13 80 4.5E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04980 5f178a2138dca744e052159d21ce376f 351 Gene3D G3DSA:3.40.50.150 167 293 8.5E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS07350 dc61db814db3af3c74b7cf9fa8c08da4 179 Pfam PF13511 Domain of unknown function (DUF4124) 12 78 2.5E-8 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 RMET_RS27175 b49d4ef6a0ae85a472325f6a72bddf6f 140 PANTHER PTHR32057 9 140 2.0E-55 T 22-04-2016 RMET_RS27175 b49d4ef6a0ae85a472325f6a72bddf6f 140 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 3 140 7.1E-37 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 PANTHER PTHR22981 3 287 3.8E-133 T 22-04-2016 RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 SUPERFAMILY SSF48179 166 288 6.8E-39 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 286 1.1E-38 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 PANTHER PTHR22981:SF27 3 287 3.8E-133 T 22-04-2016 RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 Gene3D G3DSA:3.40.50.720 2 165 3.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 PIRSF PIRSF000103 1 289 6.4E-65 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 Gene3D G3DSA:1.10.1040.10 166 287 3.2E-48 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 SUPERFAMILY SSF51735 3 163 1.26E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09185 fab14a82ccdb9410205fbc72b6964f89 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 161 2.9E-38 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RMET_RS08975 c9deb92b7dc11016cfa61b0b1a409e62 234 PANTHER PTHR24220:SF452 8 226 8.7E-122 T 22-04-2016 RMET_RS08975 c9deb92b7dc11016cfa61b0b1a409e62 234 PANTHER PTHR24220 8 226 8.7E-122 T 22-04-2016 RMET_RS08975 c9deb92b7dc11016cfa61b0b1a409e62 234 Pfam PF00005 ABC transporter 26 174 3.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS08975 c9deb92b7dc11016cfa61b0b1a409e62 234 Gene3D G3DSA:3.40.50.300 5 227 3.8E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08975 c9deb92b7dc11016cfa61b0b1a409e62 234 SUPERFAMILY SSF52540 6 226 2.18E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08975 c9deb92b7dc11016cfa61b0b1a409e62 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS08975 c9deb92b7dc11016cfa61b0b1a409e62 234 SMART SM00382 35 223 5.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS00985 05cc4b7f0847cacf52e1ccba1c17030c 198 PANTHER PTHR21327 7 198 6.0E-104 T 22-04-2016 RMET_RS00985 05cc4b7f0847cacf52e1ccba1c17030c 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 4 198 39.641 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RMET_RS00985 05cc4b7f0847cacf52e1ccba1c17030c 198 SUPERFAMILY SSF142695 8 175 4.05E-62 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RMET_RS00985 05cc4b7f0847cacf52e1ccba1c17030c 198 Pfam PF00925 GTP cyclohydrolase II 10 172 9.8E-67 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RMET_RS00985 05cc4b7f0847cacf52e1ccba1c17030c 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 11 197 1.6E-73 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 Gene3D G3DSA:3.40.47.10 142 184 1.1E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 Gene3D G3DSA:3.40.47.10 276 391 1.1E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 SUPERFAMILY SSF53901 271 391 2.74E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 6.4E-45 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 Pfam PF00108 Thiolase, N-terminal domain 5 261 8.5E-61 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 PIRSF PIRSF000429 1 392 3.0E-116 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 Gene3D G3DSA:3.40.47.10 4 125 2.0E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 Gene3D G3DSA:3.40.47.10 185 274 2.0E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 SUPERFAMILY SSF53901 1 264 2.76E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 3.3E-124 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 PANTHER PTHR18919:SF14 1 392 8.1E-217 T 22-04-2016 RMET_RS09275 524ccebf6255c389d2ba3bdf63a4c04f 392 PANTHER PTHR18919 1 392 8.1E-217 T 22-04-2016 RMET_RS11355 673dd6c92116d9ead083e35343b97d26 237 SUPERFAMILY SSF55073 86 233 2.98E-39 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS11355 673dd6c92116d9ead083e35343b97d26 237 Pfam PF00990 Diguanylate cyclase, GGDEF domain 81 231 7.7E-36 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11355 673dd6c92116d9ead083e35343b97d26 237 PANTHER PTHR10799 38 232 3.5E-25 T 22-04-2016 RMET_RS11355 673dd6c92116d9ead083e35343b97d26 237 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 77 234 1.5E-38 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11355 673dd6c92116d9ead083e35343b97d26 237 PANTHER PTHR10799:SF750 38 232 3.5E-25 T 22-04-2016 RMET_RS11355 673dd6c92116d9ead083e35343b97d26 237 Gene3D G3DSA:3.30.70.270 82 234 6.1E-45 T 22-04-2016 RMET_RS11355 673dd6c92116d9ead083e35343b97d26 237 SMART SM00267 70 235 6.3E-53 T 22-04-2016 IPR000160 GGDEF domain RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 SUPERFAMILY SSF161098 317 493 1.09E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 PANTHER PTHR30177:SF4 224 506 1.4E-71 T 22-04-2016 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 Gene3D G3DSA:3.40.190.10 32 131 1.5E-38 T 22-04-2016 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 Gene3D G3DSA:3.40.190.10 235 288 1.5E-38 T 22-04-2016 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 Gene3D G3DSA:1.10.3720.10 303 492 5.0E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 SUPERFAMILY SSF53850 34 289 7.76E-53 T 22-04-2016 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 336 494 6.1E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 Gene3D G3DSA:3.40.190.120 132 228 1.5E-25 T 22-04-2016 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 PANTHER PTHR30177 224 506 1.4E-71 T 22-04-2016 RMET_RS08040 a866e4e3e09d343806c02f3555797f20 516 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 286 3.2E-50 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RMET_RS29700 08f00b2411c2458a0974b5c64831f007 94 Gene3D G3DSA:1.10.3720.10 11 92 4.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS29700 08f00b2411c2458a0974b5c64831f007 94 PANTHER PTHR30406:SF2 1 93 7.8E-19 T 22-04-2016 RMET_RS29700 08f00b2411c2458a0974b5c64831f007 94 SUPERFAMILY SSF161098 8 93 4.45E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS29700 08f00b2411c2458a0974b5c64831f007 94 PANTHER PTHR30406 1 93 7.8E-19 T 22-04-2016 RMET_RS12110 2979db306c587b493df286e61d01c96f 143 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 24.309 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RMET_RS12110 2979db306c587b493df286e61d01c96f 143 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 128 1.6E-20 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RMET_RS12110 2979db306c587b493df286e61d01c96f 143 Gene3D G3DSA:3.90.470.20 2 128 6.8E-31 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RMET_RS12110 2979db306c587b493df286e61d01c96f 143 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 103 7.1E-17 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RMET_RS12110 2979db306c587b493df286e61d01c96f 143 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 129 2.9E-25 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RMET_RS12110 2979db306c587b493df286e61d01c96f 143 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 91 3.0E-43 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RMET_RS12110 2979db306c587b493df286e61d01c96f 143 SUPERFAMILY SSF56214 2 128 5.23E-26 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 8.0E-187 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 PANTHER PTHR11993:SF10 3 164 3.3E-238 T 22-04-2016 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 PANTHER PTHR11993:SF10 190 412 3.3E-238 T 22-04-2016 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.179 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 SUPERFAMILY SSF56762 16 417 1.09E-136 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 PANTHER PTHR11993 3 164 3.3E-238 T 22-04-2016 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 PANTHER PTHR11993 190 412 3.3E-238 T 22-04-2016 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 8.5E-124 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 RMET_RS04680 bda35db867e8acc32ce9dfae0028cea5 417 Gene3D G3DSA:1.10.645.10 6 404 4.9E-62 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS22155 d399d4154bbbe4a1254256cc863a7aa9 140 PANTHER PTHR34406 1 140 3.2E-23 T 22-04-2016 RMET_RS22155 d399d4154bbbe4a1254256cc863a7aa9 140 Pfam PF04264 YceI-like domain 1 140 1.2E-25 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS22155 d399d4154bbbe4a1254256cc863a7aa9 140 PANTHER PTHR34406:SF1 1 140 3.2E-23 T 22-04-2016 RMET_RS22155 d399d4154bbbe4a1254256cc863a7aa9 140 Gene3D G3DSA:2.40.128.110 1 140 8.1E-31 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS22155 d399d4154bbbe4a1254256cc863a7aa9 140 SMART SM00867 1 140 2.0E-21 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS22155 d399d4154bbbe4a1254256cc863a7aa9 140 SUPERFAMILY SSF101874 1 140 3.27E-33 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 SUPERFAMILY SSF51412 215 477 4.32E-126 T 22-04-2016 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 SUPERFAMILY SSF51412 2 89 4.32E-126 T 22-04-2016 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 Gene3D G3DSA:3.20.20.70 5 485 8.2E-200 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 SMART SM01240 6 473 0.0 T 22-04-2016 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 PIRSF PIRSF000130 1 487 1.6E-202 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 SUPERFAMILY SSF54631 93 205 4.76E-27 T 22-04-2016 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 Pfam PF00571 CBS domain 94 138 1.2E-7 T 22-04-2016 IPR000644 CBS domain RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 Pfam PF00571 CBS domain 153 203 1.7E-8 T 22-04-2016 IPR000644 CBS domain RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 PANTHER PTHR11911:SF6 1 279 7.0E-242 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 PANTHER PTHR11911:SF6 297 484 7.0E-242 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 455 5.0E-188 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 SMART SM00116 95 142 3.3E-8 T 22-04-2016 IPR000644 CBS domain RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 SMART SM00116 156 204 5.5E-10 T 22-04-2016 IPR000644 CBS domain RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 8.0E-163 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 PANTHER PTHR11911 1 279 7.0E-242 T 22-04-2016 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 PANTHER PTHR11911 297 484 7.0E-242 T 22-04-2016 RMET_RS07360 e753100e6fae4ce786827b4a42e2cce1 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 83.504 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 Pfam PF00520 Ion transport protein 42 250 3.1E-24 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 Gene3D G3DSA:1.10.287.70 42 251 2.3E-46 T 22-04-2016 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PANTHER PTHR11537:SF137 1 286 2.7E-95 T 22-04-2016 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PRINTS PR00169 Potassium channel signature 138 164 6.1E-28 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PRINTS PR00169 Potassium channel signature 102 122 6.1E-28 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PRINTS PR00169 Potassium channel signature 196 218 6.1E-28 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PRINTS PR00169 Potassium channel signature 34 62 6.1E-28 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PRINTS PR00169 Potassium channel signature 167 190 6.1E-28 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PRINTS PR00169 Potassium channel signature 76 99 6.1E-28 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PRINTS PR00169 Potassium channel signature 225 251 6.1E-28 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 PANTHER PTHR11537 1 286 2.7E-95 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 RMET_RS14670 051ca0de50b38c8011440f7785889224 307 SUPERFAMILY SSF81324 39 251 1.19E-47 T 22-04-2016 RMET_RS06060 3e75e76c8f1b76d5eb66f31e24a2171a 307 Gene3D G3DSA:3.40.800.20 4 290 1.8E-66 T 22-04-2016 IPR023801 Histone deacetylase domain RMET_RS06060 3e75e76c8f1b76d5eb66f31e24a2171a 307 Pfam PF00850 Histone deacetylase domain 24 279 2.8E-52 T 22-04-2016 IPR023801 Histone deacetylase domain RMET_RS06060 3e75e76c8f1b76d5eb66f31e24a2171a 307 PANTHER PTHR10625:SF131 7 290 1.4E-114 T 22-04-2016 RMET_RS06060 3e75e76c8f1b76d5eb66f31e24a2171a 307 SUPERFAMILY SSF52768 4 291 5.76E-83 T 22-04-2016 RMET_RS06060 3e75e76c8f1b76d5eb66f31e24a2171a 307 PRINTS PR01270 Histone deacetylase superfamily signature 147 162 2.1E-14 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS06060 3e75e76c8f1b76d5eb66f31e24a2171a 307 PRINTS PR01270 Histone deacetylase superfamily signature 221 231 2.1E-14 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS06060 3e75e76c8f1b76d5eb66f31e24a2171a 307 PRINTS PR01270 Histone deacetylase superfamily signature 113 136 2.1E-14 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS06060 3e75e76c8f1b76d5eb66f31e24a2171a 307 PANTHER PTHR10625 7 290 1.4E-114 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS16905 c338b92b040b373fe881b34432598b9f 261 SUPERFAMILY SSF52540 76 232 1.66E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16905 c338b92b040b373fe881b34432598b9f 261 PIRSF PIRSF003073 1 252 2.1E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RMET_RS16905 c338b92b040b373fe881b34432598b9f 261 Pfam PF01695 IstB-like ATP binding protein 54 230 3.0E-63 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 RMET_RS16905 c338b92b040b373fe881b34432598b9f 261 Gene3D G3DSA:3.40.50.300 78 231 2.5E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16905 c338b92b040b373fe881b34432598b9f 261 SMART SM00382 97 234 9.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS16905 c338b92b040b373fe881b34432598b9f 261 PANTHER PTHR30050 1 259 8.6E-73 T 22-04-2016 RMET_RS16905 c338b92b040b373fe881b34432598b9f 261 PANTHER PTHR30050:SF6 1 259 8.6E-73 T 22-04-2016 RMET_RS02450 c338b92b040b373fe881b34432598b9f 261 SUPERFAMILY SSF52540 76 232 1.66E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02450 c338b92b040b373fe881b34432598b9f 261 PIRSF PIRSF003073 1 252 2.1E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RMET_RS02450 c338b92b040b373fe881b34432598b9f 261 Pfam PF01695 IstB-like ATP binding protein 54 230 3.0E-63 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 RMET_RS02450 c338b92b040b373fe881b34432598b9f 261 Gene3D G3DSA:3.40.50.300 78 231 2.5E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02450 c338b92b040b373fe881b34432598b9f 261 SMART SM00382 97 234 9.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS02450 c338b92b040b373fe881b34432598b9f 261 PANTHER PTHR30050 1 259 8.6E-73 T 22-04-2016 RMET_RS02450 c338b92b040b373fe881b34432598b9f 261 PANTHER PTHR30050:SF6 1 259 8.6E-73 T 22-04-2016 RMET_RS28580 6645b641001a55336d8b392933dd4295 165 PANTHER PTHR32282 1 151 2.7E-61 T 22-04-2016 RMET_RS28580 6645b641001a55336d8b392933dd4295 165 SUPERFAMILY SSF53955 1 153 2.5E-56 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS28580 6645b641001a55336d8b392933dd4295 165 PANTHER PTHR32282:SF5 1 151 2.7E-61 T 22-04-2016 RMET_RS28580 6645b641001a55336d8b392933dd4295 165 Gene3D G3DSA:1.10.3810.10 1 143 8.1E-55 T 22-04-2016 RMET_RS28580 6645b641001a55336d8b392933dd4295 165 Pfam PF00912 Transglycosylase 1 128 3.0E-47 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RMET_RS02720 3de53c75af3c99a7465bba8a6d158a28 461 PANTHER PTHR30008 15 452 2.4E-152 T 22-04-2016 RMET_RS02720 3de53c75af3c99a7465bba8a6d158a28 461 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 20 452 28.614 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RMET_RS02720 3de53c75af3c99a7465bba8a6d158a28 461 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 24 451 3.4E-143 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RMET_RS02720 3de53c75af3c99a7465bba8a6d158a28 461 PANTHER PTHR30008:SF0 15 452 2.4E-152 T 22-04-2016 RMET_RS02720 3de53c75af3c99a7465bba8a6d158a28 461 Pfam PF02601 Exonuclease VII, large subunit 139 448 2.0E-97 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RMET_RS02720 3de53c75af3c99a7465bba8a6d158a28 461 Pfam PF13742 OB-fold nucleic acid binding domain 24 115 3.0E-29 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RMET_RS14295 e724802ae47805594fde501851cd65c5 469 PANTHER PTHR11271 16 468 3.2E-154 T 22-04-2016 RMET_RS14295 e724802ae47805594fde501851cd65c5 469 SUPERFAMILY SSF51556 54 386 1.44E-69 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS14295 e724802ae47805594fde501851cd65c5 469 Pfam PF01979 Amidohydrolase family 52 420 1.0E-25 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS14295 e724802ae47805594fde501851cd65c5 469 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 6 467 1.2E-179 T 22-04-2016 IPR010252 Formiminoglutamate deiminase RMET_RS14295 e724802ae47805594fde501851cd65c5 469 Gene3D G3DSA:3.20.20.140 58 410 5.1E-72 T 22-04-2016 RMET_RS14295 e724802ae47805594fde501851cd65c5 469 PANTHER PTHR11271:SF4 16 468 3.2E-154 T 22-04-2016 IPR010252 Formiminoglutamate deiminase RMET_RS00520 3848d6a15597de3fca0ba7b66e14af71 359 Pfam PF00753 Metallo-beta-lactamase superfamily 42 270 7.6E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00520 3848d6a15597de3fca0ba7b66e14af71 359 PANTHER PTHR11935 14 129 4.9E-39 T 22-04-2016 RMET_RS00520 3848d6a15597de3fca0ba7b66e14af71 359 PANTHER PTHR11935 157 282 4.9E-39 T 22-04-2016 RMET_RS00520 3848d6a15597de3fca0ba7b66e14af71 359 SMART SM00849 42 270 1.5E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00520 3848d6a15597de3fca0ba7b66e14af71 359 Gene3D G3DSA:3.60.15.10 16 301 4.6E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00520 3848d6a15597de3fca0ba7b66e14af71 359 SUPERFAMILY SSF56281 15 354 1.23E-64 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS00520 3848d6a15597de3fca0ba7b66e14af71 359 PANTHER PTHR11935:SF109 14 129 4.9E-39 T 22-04-2016 RMET_RS00520 3848d6a15597de3fca0ba7b66e14af71 359 PANTHER PTHR11935:SF109 157 282 4.9E-39 T 22-04-2016 RMET_RS06305 a0ab53390b3131abeda55c86b271468c 333 SUPERFAMILY SSF53098 133 306 2.02E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06305 a0ab53390b3131abeda55c86b271468c 333 Pfam PF00665 Integrase core domain 135 255 1.3E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS06305 a0ab53390b3131abeda55c86b271468c 333 SUPERFAMILY SSF46689 23 110 4.3E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS06305 a0ab53390b3131abeda55c86b271468c 333 PANTHER PTHR24559 135 298 4.4E-20 T 22-04-2016 RMET_RS06305 a0ab53390b3131abeda55c86b271468c 333 Gene3D G3DSA:3.30.420.10 133 301 1.2E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS14710 49d21c322ac1e848d3d79a0523ec508e 379 Gene3D G3DSA:3.40.50.300 110 352 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14710 49d21c322ac1e848d3d79a0523ec508e 379 SUPERFAMILY SSF52540 5 345 5.94E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14710 49d21c322ac1e848d3d79a0523ec508e 379 PANTHER PTHR30486 11 368 1.8E-156 T 22-04-2016 RMET_RS14710 49d21c322ac1e848d3d79a0523ec508e 379 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 11 351 1.5E-139 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RMET_RS14710 49d21c322ac1e848d3d79a0523ec508e 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 201 215 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS14710 49d21c322ac1e848d3d79a0523ec508e 379 PANTHER PTHR30486:SF3 11 368 1.8E-156 T 22-04-2016 RMET_RS14710 49d21c322ac1e848d3d79a0523ec508e 379 Pfam PF00437 Type II/IV secretion system protein 123 275 5.4E-39 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 201 219 2.6E-41 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 349 368 2.6E-41 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 128 153 2.6E-41 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 319 335 2.6E-41 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 219 238 2.6E-41 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 PANTHER PTHR11686 10 366 1.9E-111 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 Pfam PF01019 Gamma-glutamyltranspeptidase 121 372 1.2E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 SUPERFAMILY SSF56235 96 372 3.28E-91 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS22970 9d34b8c2e356474e9097f1ab54e187ad 390 PANTHER PTHR11686:SF27 10 366 1.9E-111 T 22-04-2016 RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 PANTHER PTHR10625 34 74 9.7E-76 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 PANTHER PTHR10625 110 344 9.7E-76 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 Gene3D G3DSA:3.40.800.20 116 353 2.1E-79 T 22-04-2016 IPR023801 Histone deacetylase domain RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 Gene3D G3DSA:3.40.800.20 8 79 2.1E-79 T 22-04-2016 IPR023801 Histone deacetylase domain RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 PRINTS PR01270 Histone deacetylase superfamily signature 287 297 1.9E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 PRINTS PR01270 Histone deacetylase superfamily signature 169 192 1.9E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 PRINTS PR01270 Histone deacetylase superfamily signature 201 216 1.9E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 SUPERFAMILY SSF52768 4 353 7.19E-87 T 22-04-2016 RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 PANTHER PTHR10625:SF121 34 74 9.7E-76 T 22-04-2016 RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 PANTHER PTHR10625:SF121 110 344 9.7E-76 T 22-04-2016 RMET_RS08155 3d44f07d367367728a5612a677f0a673 357 Pfam PF00850 Histone deacetylase domain 44 349 2.9E-67 T 22-04-2016 IPR023801 Histone deacetylase domain RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 104 739 2.4E-84 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 Pfam PF00593 TonB dependent receptor 510 740 3.9E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 Gene3D G3DSA:2.40.170.20 218 742 3.8E-93 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 PANTHER PTHR32552 93 742 1.8E-60 T 22-04-2016 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 PANTHER PTHR32552 1 76 1.8E-60 T 22-04-2016 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 PANTHER PTHR32552:SF10 93 742 1.8E-60 T 22-04-2016 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 PANTHER PTHR32552:SF10 1 76 1.8E-60 T 22-04-2016 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 102 203 5.8E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 Gene3D G3DSA:2.170.130.10 63 213 1.4E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS09105 10944269a9cc57afff652da9fb3197d5 742 SUPERFAMILY SSF56935 63 741 5.13E-105 T 22-04-2016 RMET_RS08985 3828b6dd7558d275c2f8b9f3fce31ea0 388 Pfam PF02687 FtsX-like permease family 261 380 4.3E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RMET_RS08985 3828b6dd7558d275c2f8b9f3fce31ea0 388 PANTHER PTHR30572 10 388 1.1E-130 T 22-04-2016 RMET_RS08985 3828b6dd7558d275c2f8b9f3fce31ea0 388 Pfam PF12704 MacB-like periplasmic core domain 19 227 8.5E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RMET_RS08985 3828b6dd7558d275c2f8b9f3fce31ea0 388 PANTHER PTHR30572:SF12 10 388 1.1E-130 T 22-04-2016 RMET_RS12475 5d8e8f89387d133415a94c2f48797095 136 Gene3D G3DSA:1.20.1300.10 2 133 2.0E-34 T 22-04-2016 RMET_RS12475 5d8e8f89387d133415a94c2f48797095 136 SUPERFAMILY SSF81343 1 132 9.97E-27 T 22-04-2016 RMET_RS12475 5d8e8f89387d133415a94c2f48797095 136 PANTHER PTHR10978:SF4 20 130 6.8E-15 T 22-04-2016 RMET_RS12475 5d8e8f89387d133415a94c2f48797095 136 PANTHER PTHR10978 20 130 6.8E-15 T 22-04-2016 RMET_RS12475 5d8e8f89387d133415a94c2f48797095 136 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 130 7.1E-35 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 RMET_RS12475 5d8e8f89387d133415a94c2f48797095 136 PIRSF PIRSF000178 1 133 2.4E-28 T 22-04-2016 RMET_RS12475 5d8e8f89387d133415a94c2f48797095 136 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 20 127 5.7E-24 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 SUPERFAMILY SSF52833 3 159 1.1E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 Gene3D G3DSA:3.40.30.10 3 160 4.9E-71 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 PRINTS PR01011 Glutathione peroxidase family signature 123 132 3.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 PIRSF PIRSF000303 1 163 1.2E-66 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 PANTHER PTHR11592 1 164 1.3E-88 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 Pfam PF00255 Glutathione peroxidase 4 110 9.3E-43 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS14705 6255415a7a0aa7168d62620212f2f57e 164 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 22-04-2016 IPR029759 Glutathione peroxidase active site RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.0E-40 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 PANTHER PTHR11964 5 380 2.2E-267 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 Gene3D G3DSA:3.30.300.10 136 235 5.3E-43 T 22-04-2016 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 Gene3D G3DSA:3.30.300.10 246 385 6.3E-69 T 22-04-2016 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 2.6E-181 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 SUPERFAMILY SSF55973 4 110 1.96E-45 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 385 56.231 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 SUPERFAMILY SSF55973 235 385 7.06E-68 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 SUPERFAMILY SSF55973 113 234 1.53E-50 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 373 2.1E-68 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 233 4.9E-46 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 PIRSF PIRSF000497 1 385 1.4E-170 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RMET_RS00795 89027988f4421dff3f7e4f1ce8705c15 387 Gene3D G3DSA:3.30.300.10 12 135 3.1E-46 T 22-04-2016 RMET_RS06255 78634b59d38029f4dc047af0a0653b84 419 Pfam PF00589 Phage integrase family 237 403 6.7E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06255 78634b59d38029f4dc047af0a0653b84 419 PANTHER PTHR30349:SF5 131 411 1.4E-31 T 22-04-2016 RMET_RS06255 78634b59d38029f4dc047af0a0653b84 419 Gene3D G3DSA:1.10.150.130 127 217 1.8E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS06255 78634b59d38029f4dc047af0a0653b84 419 Gene3D G3DSA:1.10.443.10 237 411 1.3E-32 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06255 78634b59d38029f4dc047af0a0653b84 419 PANTHER PTHR30349 131 411 1.4E-31 T 22-04-2016 RMET_RS06255 78634b59d38029f4dc047af0a0653b84 419 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 130 209 3.9E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS06255 78634b59d38029f4dc047af0a0653b84 419 SUPERFAMILY SSF56349 139 411 1.53E-39 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS28395 02497d9e004f7f15a3dbac2999c2bd7f 140 PANTHER PTHR10277:SF1 2 140 5.7E-40 T 22-04-2016 RMET_RS28395 02497d9e004f7f15a3dbac2999c2bd7f 140 PANTHER PTHR10277 2 140 5.7E-40 T 22-04-2016 RMET_RS28395 02497d9e004f7f15a3dbac2999c2bd7f 140 SUPERFAMILY SSF51569 3 139 6.41E-25 T 22-04-2016 RMET_RS28395 02497d9e004f7f15a3dbac2999c2bd7f 140 Pfam PF00682 HMGL-like 17 139 2.1E-12 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RMET_RS28395 02497d9e004f7f15a3dbac2999c2bd7f 140 Gene3D G3DSA:3.20.20.70 6 139 1.4E-19 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS00165 0e5cb892f16d491e3737c21a4b8e91f8 98 Pfam PF01527 Transposase 6 77 6.8E-11 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RMET_RS00165 0e5cb892f16d491e3737c21a4b8e91f8 98 PANTHER PTHR33215 3 97 2.3E-23 T 22-04-2016 RMET_RS00165 0e5cb892f16d491e3737c21a4b8e91f8 98 SUPERFAMILY SSF46689 6 96 1.76E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00165 0e5cb892f16d491e3737c21a4b8e91f8 98 Gene3D G3DSA:1.10.10.60 13 92 4.8E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS16840 0e5cb892f16d491e3737c21a4b8e91f8 98 Pfam PF01527 Transposase 6 77 6.8E-11 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RMET_RS16840 0e5cb892f16d491e3737c21a4b8e91f8 98 PANTHER PTHR33215 3 97 2.3E-23 T 22-04-2016 RMET_RS16840 0e5cb892f16d491e3737c21a4b8e91f8 98 SUPERFAMILY SSF46689 6 96 1.76E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS16840 0e5cb892f16d491e3737c21a4b8e91f8 98 Gene3D G3DSA:1.10.10.60 13 92 4.8E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08115 0e5cb892f16d491e3737c21a4b8e91f8 98 Pfam PF01527 Transposase 6 77 6.8E-11 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RMET_RS08115 0e5cb892f16d491e3737c21a4b8e91f8 98 PANTHER PTHR33215 3 97 2.3E-23 T 22-04-2016 RMET_RS08115 0e5cb892f16d491e3737c21a4b8e91f8 98 SUPERFAMILY SSF46689 6 96 1.76E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08115 0e5cb892f16d491e3737c21a4b8e91f8 98 Gene3D G3DSA:1.10.10.60 13 92 4.8E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 7 322 34.895 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 SUPERFAMILY SSF50486 220 326 1.69E-26 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 PANTHER PTHR11138 6 316 1.5E-103 T 22-04-2016 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 147 170 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 SUPERFAMILY SSF53328 6 219 1.13E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 Pfam PF00551 Formyl transferase 8 195 1.6E-43 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 7 318 1.2E-83 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 Pfam PF02911 Formyl transferase, C-terminal domain 219 317 2.4E-20 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 Gene3D G3DSA:3.10.25.10 222 326 2.8E-27 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS17905 386141071cbf5a4402356eb89b9e19d5 332 Gene3D G3DSA:3.40.50.170 6 220 2.1E-75 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS23990 b41b3c3402eb33f7b52c4f86e21c4c68 83 PANTHER PTHR30349:SF32 1 81 5.9E-30 T 22-04-2016 RMET_RS23990 b41b3c3402eb33f7b52c4f86e21c4c68 83 PANTHER PTHR30349 1 81 5.9E-30 T 22-04-2016 RMET_RS23990 b41b3c3402eb33f7b52c4f86e21c4c68 83 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 21 79 1.6E-16 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS10620 d1db8d83fafae0d73828fc14123483cc 270 SMART SM00382 37 217 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10620 d1db8d83fafae0d73828fc14123483cc 270 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS10620 d1db8d83fafae0d73828fc14123483cc 270 PANTHER PTHR24220:SF561 7 216 4.4E-99 T 22-04-2016 RMET_RS10620 d1db8d83fafae0d73828fc14123483cc 270 Gene3D G3DSA:3.40.50.300 2 216 2.4E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10620 d1db8d83fafae0d73828fc14123483cc 270 SUPERFAMILY SSF52540 7 231 1.73E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10620 d1db8d83fafae0d73828fc14123483cc 270 Pfam PF00005 ABC transporter 29 167 7.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS10620 d1db8d83fafae0d73828fc14123483cc 270 PANTHER PTHR24220 7 216 4.4E-99 T 22-04-2016 RMET_RS02960 684da13903ddf1f40834b6435346e9e9 366 Gene3D G3DSA:3.40.50.720 148 303 3.8E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02960 684da13903ddf1f40834b6435346e9e9 366 PANTHER PTHR13812 62 333 2.3E-42 T 22-04-2016 RMET_RS02960 684da13903ddf1f40834b6435346e9e9 366 Gene3D G3DSA:3.30.1780.10 10 147 4.5E-37 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal RMET_RS02960 684da13903ddf1f40834b6435346e9e9 366 SUPERFAMILY SSF51735 10 346 3.95E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02960 684da13903ddf1f40834b6435346e9e9 366 PANTHER PTHR13812:SF19 62 333 2.3E-42 T 22-04-2016 RMET_RS02960 684da13903ddf1f40834b6435346e9e9 366 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 23 317 1.3E-93 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RMET_RS09680 820e770be04a5531af684ed725b39953 415 PIRSF PIRSF001235 8 415 1.5E-136 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS09680 820e770be04a5531af684ed725b39953 415 Pfam PF07687 Peptidase dimerisation domain 218 310 5.0E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS09680 820e770be04a5531af684ed725b39953 415 SUPERFAMILY SSF55031 218 333 1.7E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS09680 820e770be04a5531af684ed725b39953 415 SUPERFAMILY SSF53187 341 414 6.0E-96 T 22-04-2016 RMET_RS09680 820e770be04a5531af684ed725b39953 415 SUPERFAMILY SSF53187 4 228 6.0E-96 T 22-04-2016 RMET_RS09680 820e770be04a5531af684ed725b39953 415 Gene3D G3DSA:3.30.70.360 231 333 1.5E-39 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS09680 820e770be04a5531af684ed725b39953 415 Gene3D G3DSA:3.40.630.10 356 414 9.9E-115 T 22-04-2016 RMET_RS09680 820e770be04a5531af684ed725b39953 415 Gene3D G3DSA:3.40.630.10 8 230 9.9E-115 T 22-04-2016 RMET_RS09680 820e770be04a5531af684ed725b39953 415 PANTHER PTHR32494:SF6 8 414 9.4E-175 T 22-04-2016 RMET_RS09680 820e770be04a5531af684ed725b39953 415 Pfam PF01546 Peptidase family M20/M25/M40 83 411 1.7E-33 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS09680 820e770be04a5531af684ed725b39953 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 13 413 2.8E-133 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS09680 820e770be04a5531af684ed725b39953 415 PANTHER PTHR32494 8 414 9.4E-175 T 22-04-2016 RMET_RS01375 66d6fdba7d856c7fab34d91ad7f24568 312 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 24 305 19.041 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RMET_RS01375 66d6fdba7d856c7fab34d91ad7f24568 312 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 27 304 1.0E-88 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RMET_RS01375 66d6fdba7d856c7fab34d91ad7f24568 312 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 79 101 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site RMET_RS01375 66d6fdba7d856c7fab34d91ad7f24568 312 PANTHER PTHR11048 5 309 2.4E-74 T 22-04-2016 RMET_RS01375 66d6fdba7d856c7fab34d91ad7f24568 312 Pfam PF01040 UbiA prenyltransferase family 40 286 1.1E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RMET_RS06565 86d3a6de428cf94225b6e49786547372 87 Gene3D G3DSA:1.10.10.60 7 83 1.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS06565 86d3a6de428cf94225b6e49786547372 87 SUPERFAMILY SSF46689 1 82 9.86E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS06565 86d3a6de428cf94225b6e49786547372 87 PANTHER PTHR33609 1 87 2.3E-39 T 22-04-2016 RMET_RS06565 86d3a6de428cf94225b6e49786547372 87 Pfam PF01527 Transposase 2 70 4.5E-22 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RMET_RS15070 5e1352a90adc4a7fb2ce1b27d925eda2 204 Gene3D G3DSA:1.10.10.60 145 187 3.7E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15070 5e1352a90adc4a7fb2ce1b27d925eda2 204 Gene3D G3DSA:3.40.50.1390 1 126 3.6E-37 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RMET_RS15070 5e1352a90adc4a7fb2ce1b27d925eda2 204 PANTHER PTHR30461 1 204 1.1E-45 T 22-04-2016 RMET_RS15070 5e1352a90adc4a7fb2ce1b27d925eda2 204 Pfam PF00239 Resolvase, N terminal domain 3 143 1.4E-39 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RMET_RS15070 5e1352a90adc4a7fb2ce1b27d925eda2 204 SMART SM00857 2 143 3.2E-53 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RMET_RS15070 5e1352a90adc4a7fb2ce1b27d925eda2 204 SUPERFAMILY SSF46689 145 187 1.64E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15070 5e1352a90adc4a7fb2ce1b27d925eda2 204 ProSitePatterns PS00398 Site-specific recombinases signature 2. 59 71 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RMET_RS15070 5e1352a90adc4a7fb2ce1b27d925eda2 204 SUPERFAMILY SSF53041 1 142 3.92E-40 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RMET_RS01775 544d596a52b646cb879bbc083fd5ef6a 320 PANTHER PTHR32347:SF15 13 317 2.0E-60 T 22-04-2016 RMET_RS01775 544d596a52b646cb879bbc083fd5ef6a 320 SUPERFAMILY SSF111369 174 257 9.42E-6 T 22-04-2016 RMET_RS01775 544d596a52b646cb879bbc083fd5ef6a 320 Pfam PF13437 HlyD family secretion protein 201 312 5.0E-16 T 22-04-2016 RMET_RS01775 544d596a52b646cb879bbc083fd5ef6a 320 Gene3D G3DSA:2.40.50.100 39 71 1.4E-8 T 22-04-2016 RMET_RS01775 544d596a52b646cb879bbc083fd5ef6a 320 Gene3D G3DSA:2.40.50.100 198 230 1.4E-8 T 22-04-2016 RMET_RS01775 544d596a52b646cb879bbc083fd5ef6a 320 PANTHER PTHR32347 13 317 2.0E-60 T 22-04-2016 RMET_RS01775 544d596a52b646cb879bbc083fd5ef6a 320 Pfam PF13533 Biotin-lipoyl like 39 85 4.1E-9 T 22-04-2016 RMET_RS13790 8ef3a0ba4ddafa297d73c51b892a13fb 693 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 363 690 5.2E-56 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX RMET_RS13790 8ef3a0ba4ddafa297d73c51b892a13fb 693 PANTHER PTHR38043 321 690 1.3E-32 T 22-04-2016 RMET_RS13790 8ef3a0ba4ddafa297d73c51b892a13fb 693 Gene3D G3DSA:3.40.50.10090 149 278 4.2E-11 T 22-04-2016 RMET_RS13790 8ef3a0ba4ddafa297d73c51b892a13fb 693 Gene3D G3DSA:3.40.50.10090 5 110 4.8E-15 T 22-04-2016 RMET_RS13790 8ef3a0ba4ddafa297d73c51b892a13fb 693 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 273 5.9E-32 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS13790 8ef3a0ba4ddafa297d73c51b892a13fb 693 SUPERFAMILY SSF69618 4 278 3.79E-45 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 PANTHER PTHR10000:SF7 76 279 1.8E-77 T 22-04-2016 RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 SUPERFAMILY SSF56784 74 282 1.18E-44 T 22-04-2016 IPR023214 HAD-like domain RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 Gene3D G3DSA:3.40.50.1000 139 269 2.1E-38 T 22-04-2016 IPR023214 HAD-like domain RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 Gene3D G3DSA:1.10.150.210 87 138 5.1E-27 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 77 249 5.1E-27 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 PANTHER PTHR10000 76 279 1.8E-77 T 22-04-2016 RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 Pfam PF00702 haloacid dehalogenase-like hydrolase 76 251 9.4E-15 T 22-04-2016 RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 73 281 1.3E-67 T 22-04-2016 RMET_RS06895 beb34ac3b737f43d3e502c7c1e221642 284 Pfam PF13284 Domain of unknown function (DUF4072) 3 52 1.4E-13 T 22-04-2016 IPR025138 Domain of unknown function DUF4072 RMET_RS04540 73070fa8f718a35d9a04375ad6f9c649 236 PANTHER PTHR30055 1 171 2.2E-39 T 22-04-2016 RMET_RS04540 73070fa8f718a35d9a04375ad6f9c649 236 Pfam PF13972 Bacterial transcriptional repressor 65 212 4.8E-45 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR RMET_RS04540 73070fa8f718a35d9a04375ad6f9c649 236 PANTHER PTHR30055:SF30 1 171 2.2E-39 T 22-04-2016 RMET_RS04540 73070fa8f718a35d9a04375ad6f9c649 236 SUPERFAMILY SSF46689 5 76 1.54E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS04540 73070fa8f718a35d9a04375ad6f9c649 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS04540 73070fa8f718a35d9a04375ad6f9c649 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS04540 73070fa8f718a35d9a04375ad6f9c649 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS04540 73070fa8f718a35d9a04375ad6f9c649 236 Gene3D G3DSA:1.10.357.10 8 182 4.5E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 PANTHER PTHR30055:SF73 1 173 3.3E-24 T 22-04-2016 RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 PANTHER PTHR30055 1 173 3.3E-24 T 22-04-2016 RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 Gene3D G3DSA:1.10.357.10 3 214 4.2E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 9.3E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 SUPERFAMILY SSF48498 87 217 5.78E-37 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.1E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.1E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18060 4e2018a607421a27b267be6f1e523881 313 SUPERFAMILY SSF46689 6 79 2.51E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 SMART SM00387 71 212 3.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 SUPERFAMILY SSF55874 28 210 7.6E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 PRINTS PR00344 Bacterial sensor protein C-terminal signature 116 130 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 PRINTS PR00344 Bacterial sensor protein C-terminal signature 156 166 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 PRINTS PR00344 Bacterial sensor protein C-terminal signature 196 209 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 PRINTS PR00344 Bacterial sensor protein C-terminal signature 172 190 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 PANTHER PTHR22617:SF20 9 230 3.5E-80 T 22-04-2016 RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 75 211 1.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 Gene3D G3DSA:3.30.565.10 27 211 1.9E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS21510 5879b9b5cbc3202066e5de575fad09b8 232 PANTHER PTHR22617 9 230 3.5E-80 T 22-04-2016 RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 SUPERFAMILY SSF52467 160 351 3.27E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 SUPERFAMILY SSF52518 5 185 1.59E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 Gene3D G3DSA:3.40.50.1220 189 338 6.6E-36 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 PANTHER PTHR18968:SF120 6 545 6.1E-228 T 22-04-2016 RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 PANTHER PTHR18968 6 545 6.1E-228 T 22-04-2016 RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 540 2.1E-34 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 SUPERFAMILY SSF52518 369 550 1.42E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 Gene3D G3DSA:3.40.50.970 4 188 7.3E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 Gene3D G3DSA:3.40.50.970 360 547 2.6E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 328 1.5E-27 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RMET_RS08150 15f67d4a37d24bbe88b3de44dc437d65 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 174 5.9E-52 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.393 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 Gene3D G3DSA:3.40.5.10 1 52 1.1E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 PANTHER PTHR21368 1 146 1.5E-41 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 SUPERFAMILY SSF55658 1 56 3.49E-17 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 4.9E-43 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 SUPERFAMILY SSF55653 60 147 1.83E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 6.0E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 Gene3D G3DSA:3.10.430.100 60 148 9.1E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RMET_RS09905 44f9313386954a841ef103828ecfa1ac 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.4E-20 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RMET_RS07730 d06cf6ede2efa4c802860e1c64b28525 326 PANTHER PTHR30134 46 313 3.1E-132 T 22-04-2016 RMET_RS07730 d06cf6ede2efa4c802860e1c64b28525 326 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 115 275 3.1E-35 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS07730 d06cf6ede2efa4c802860e1c64b28525 326 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 86 294 3.5E-88 T 22-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 RMET_RS07730 d06cf6ede2efa4c802860e1c64b28525 326 SUPERFAMILY SSF52540 88 294 2.34E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07730 d06cf6ede2efa4c802860e1c64b28525 326 Gene3D G3DSA:3.40.50.300 122 279 3.6E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07730 d06cf6ede2efa4c802860e1c64b28525 326 PANTHER PTHR30134:SF2 46 313 3.1E-132 T 22-04-2016 RMET_RS17725 37a343bbeb16734c63c7ef75dbc52274 332 SUPERFAMILY SSF51430 5 312 2.1E-106 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS17725 37a343bbeb16734c63c7ef75dbc52274 332 PANTHER PTHR11732 2 327 3.2E-163 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RMET_RS17725 37a343bbeb16734c63c7ef75dbc52274 332 Pfam PF00248 Aldo/keto reductase family 16 311 2.1E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS17725 37a343bbeb16734c63c7ef75dbc52274 332 Gene3D G3DSA:3.20.20.100 5 328 1.4E-118 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS17725 37a343bbeb16734c63c7ef75dbc52274 332 PANTHER PTHR11732:SF225 2 327 3.2E-163 T 22-04-2016 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 ProSitePatterns PS00177 DNA topoisomerase II signature. 450 458 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 SMART SM00387 39 204 2.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 770 830 1.3E-26 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 13 841 1.2E-287 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Pfam PF01751 Toprim domain 447 559 9.5E-18 T 22-04-2016 IPR006171 Toprim domain RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 SMART SM00433 43 607 2.6E-238 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Gene3D G3DSA:3.30.230.10 248 420 1.3E-75 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 SUPERFAMILY SSF54211 249 420 5.31E-60 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 402 422 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 810 826 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 248 270 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 794 806 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 13 23 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 224 237 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 498 507 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 388 402 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 209 224 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR01159 DNA gyrase subunit B signature 340 356 6.8E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 SUPERFAMILY SSF55874 13 244 2.36E-62 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Gene3D G3DSA:3.30.565.10 13 246 2.1E-89 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Pfam PF00204 DNA gyrase B 249 418 3.4E-57 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Gene3D G3DSA:3.40.50.670 432 578 2.4E-98 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Gene3D G3DSA:3.40.50.670 755 823 2.4E-98 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 SUPERFAMILY SSF56719 422 588 7.85E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 SUPERFAMILY SSF56719 767 831 7.85E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 515 531 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 533 550 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 43 58 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 125 139 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 296 309 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 553 565 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 773 789 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 78 91 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PRINTS PR00418 DNA topoisomerase II family signature 448 462 2.2E-66 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PANTHER PTHR10169 761 841 2.4E-281 T 22-04-2016 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PANTHER PTHR10169 175 581 2.4E-281 T 22-04-2016 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 PANTHER PTHR10169 5 159 2.4E-281 T 22-04-2016 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 10 841 98.131 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RMET_RS00030 9f5d17f8a94da4c6a5d92b93bf6abe6a 841 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 203 4.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 SUPERFAMILY SSF54913 1 112 2.1E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 PIRSF PIRSF039144 1 112 1.9E-55 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 SMART SM00938 4 105 6.1E-65 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 PANTHER PTHR30115:SF12 1 112 5.1E-70 T 22-04-2016 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 PRINTS PR00340 P-II protein signature 52 75 1.9E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 PRINTS PR00340 P-II protein signature 23 41 1.9E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 PRINTS PR00340 P-II protein signature 2 17 1.9E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 PRINTS PR00340 P-II protein signature 83 103 1.9E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 Gene3D G3DSA:3.30.70.120 1 112 1.9E-49 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RMET_RS03435 31723cc7dca6895b87d6d029fde93f62 112 PANTHER PTHR30115 1 112 5.1E-70 T 22-04-2016 RMET_RS02850 11e13521ab302df1f13eb40f32b88bc6 754 SUPERFAMILY SSF53474 73 400 8.12E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS02850 11e13521ab302df1f13eb40f32b88bc6 754 Gene3D G3DSA:3.40.50.1820 337 372 1.2E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS02850 11e13521ab302df1f13eb40f32b88bc6 754 Gene3D G3DSA:3.40.50.1820 174 224 1.2E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS02850 11e13521ab302df1f13eb40f32b88bc6 754 Pfam PF11339 Protein of unknown function (DUF3141) 45 623 5.4E-290 T 22-04-2016 IPR024501 Protein of unknown function DUF3141 RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 SUPERFAMILY SSF55781 82 256 4.51E-25 T 22-04-2016 IPR029016 GAF domain-like RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 Gene3D G3DSA:1.10.10.10 11 85 1.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 Pfam PF01614 Bacterial transcriptional regulator 135 228 9.0E-9 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 PANTHER PTHR30136:SF8 13 256 1.1E-46 T 22-04-2016 RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 SMART SM00346 16 106 5.2E-6 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 SUPERFAMILY SSF46785 16 89 1.13E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 PANTHER PTHR30136 13 256 1.1E-46 T 22-04-2016 RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 Gene3D G3DSA:3.30.450.40 88 256 4.1E-29 T 22-04-2016 IPR029016 GAF domain-like RMET_RS01710 15d55410a712e659629748de1f34f2bf 261 Pfam PF09339 IclR helix-turn-helix domain 18 68 3.4E-11 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS07180 74344607b270a8e298d287b6700d745a 279 SUPERFAMILY SSF47240 9 207 8.59E-40 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS07180 74344607b270a8e298d287b6700d745a 279 Gene3D G3DSA:1.10.620.20 55 182 4.3E-12 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS00665 b1cb02778487dd334ce2f393ac1ea148 328 PANTHER PTHR30349:SF1 1 287 6.6E-72 T 22-04-2016 RMET_RS00665 b1cb02778487dd334ce2f393ac1ea148 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 324 3.0E-72 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS00665 b1cb02778487dd334ce2f393ac1ea148 328 PIRSF PIRSF017082 1 328 4.5E-70 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS00665 b1cb02778487dd334ce2f393ac1ea148 328 PANTHER PTHR30349 1 287 6.6E-72 T 22-04-2016 RMET_RS00665 b1cb02778487dd334ce2f393ac1ea148 328 SUPERFAMILY SSF53850 115 285 1.52E-8 T 22-04-2016 RMET_RS17070 2fbdf9c08eeea6750967634fe5ac5fad 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 129 6.2E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RMET_RS17070 2fbdf9c08eeea6750967634fe5ac5fad 136 SUPERFAMILY SSF54593 4 129 8.11E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS17070 2fbdf9c08eeea6750967634fe5ac5fad 136 Gene3D G3DSA:3.10.180.10 8 132 1.1E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS17070 2fbdf9c08eeea6750967634fe5ac5fad 136 PANTHER PTHR10374 2 132 1.1E-27 T 22-04-2016 RMET_RS17070 2fbdf9c08eeea6750967634fe5ac5fad 136 PANTHER PTHR10374:SF9 2 132 1.1E-27 T 22-04-2016 RMET_RS04065 35ef04213a41bc5646a69e356a8173ed 75 Gene3D G3DSA:3.30.110.40 2 74 3.7E-31 T 22-04-2016 IPR001455 TusA-like domain RMET_RS04065 35ef04213a41bc5646a69e356a8173ed 75 PANTHER PTHR33279 5 75 8.6E-20 T 22-04-2016 RMET_RS04065 35ef04213a41bc5646a69e356a8173ed 75 Pfam PF01206 Sulfurtransferase TusA 5 73 9.3E-25 T 22-04-2016 IPR001455 TusA-like domain RMET_RS04065 35ef04213a41bc5646a69e356a8173ed 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 22-04-2016 IPR001455 TusA-like domain RMET_RS04065 35ef04213a41bc5646a69e356a8173ed 75 SUPERFAMILY SSF64307 4 74 3.53E-25 T 22-04-2016 IPR001455 TusA-like domain RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Gene3D G3DSA:2.40.160.50 418 769 4.0E-23 T 22-04-2016 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Pfam PF07244 Surface antigen variable number repeat 31 97 7.2E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Pfam PF07244 Surface antigen variable number repeat 272 350 4.7E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Pfam PF07244 Surface antigen variable number repeat 353 427 4.2E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Pfam PF07244 Surface antigen variable number repeat 182 269 2.5E-22 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Pfam PF07244 Surface antigen variable number repeat 99 178 3.0E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Gene3D G3DSA:3.10.20.310 268 333 1.3E-4 T 22-04-2016 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 PIRSF PIRSF006076 2 769 1.3E-258 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 7 769 25.545 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 Pfam PF01103 Surface antigen 454 769 2.4E-74 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 769 8.3E-281 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 PANTHER PTHR12815:SF11 5 769 4.0E-238 T 22-04-2016 RMET_RS07270 8bbcd04c0558ff53a5a13653c0755e25 769 PANTHER PTHR12815 5 769 4.0E-238 T 22-04-2016 RMET_RS00200 93de2100d8d9392715781977aea0987e 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 11 29 8.6E-9 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RMET_RS00200 93de2100d8d9392715781977aea0987e 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 9 29 7.1E-9 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RMET_RS07300 e2b1003518626a6332e11fd53e1114c0 226 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 207 35.894 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 RMET_RS07300 e2b1003518626a6332e11fd53e1114c0 226 Gene3D G3DSA:3.30.420.10 25 168 6.8E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS07300 e2b1003518626a6332e11fd53e1114c0 226 PANTHER PTHR10954 28 223 5.7E-76 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 RMET_RS07300 e2b1003518626a6332e11fd53e1114c0 226 Pfam PF01351 Ribonuclease HII 27 206 4.1E-39 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain RMET_RS07300 e2b1003518626a6332e11fd53e1114c0 226 SUPERFAMILY SSF53098 23 213 1.97E-68 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS05310 de3f0dee3d170c0864ff37660f3eaa32 113 PANTHER PTHR37485 2 106 3.1E-36 T 22-04-2016 RMET_RS05310 de3f0dee3d170c0864ff37660f3eaa32 113 PANTHER PTHR37485:SF1 2 106 3.1E-36 T 22-04-2016 RMET_RS05310 de3f0dee3d170c0864ff37660f3eaa32 113 Pfam PF04977 Septum formation initiator 11 89 3.1E-27 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RMET_RS05310 de3f0dee3d170c0864ff37660f3eaa32 113 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.292 T 22-04-2016 IPR023081 Cell division protein FtsB RMET_RS28530 b2fe7c59641792cad6c283536792d3d6 170 PANTHER PTHR30465:SF66 1 170 2.0E-87 T 22-04-2016 RMET_RS28530 b2fe7c59641792cad6c283536792d3d6 170 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 2 166 2.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS28530 b2fe7c59641792cad6c283536792d3d6 170 Gene3D G3DSA:1.10.3720.10 5 164 7.9E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS28530 b2fe7c59641792cad6c283536792d3d6 170 PANTHER PTHR30465 1 170 2.0E-87 T 22-04-2016 RMET_RS28530 b2fe7c59641792cad6c283536792d3d6 170 SUPERFAMILY SSF161098 3 166 5.89E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15905 67de6fb53b005a2158b2a47e35c04697 549 Pfam PF02239 Cytochrome D1 heme domain 152 544 1.7E-167 T 22-04-2016 RMET_RS15905 67de6fb53b005a2158b2a47e35c04697 549 Gene3D G3DSA:1.10.760.10 13 116 4.3E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15905 67de6fb53b005a2158b2a47e35c04697 549 Gene3D G3DSA:2.130.10.10 159 237 2.1E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RMET_RS15905 67de6fb53b005a2158b2a47e35c04697 549 SUPERFAMILY SSF46626 6 123 1.23E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15905 67de6fb53b005a2158b2a47e35c04697 549 Gene3D G3DSA:2.140.10.20 251 540 4.6E-152 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain RMET_RS15905 67de6fb53b005a2158b2a47e35c04697 549 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 44 115 4.0E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15905 67de6fb53b005a2158b2a47e35c04697 549 SUPERFAMILY SSF51004 124 549 1.28E-122 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RMET_RS16405 57439006186367a988dff834f41f900e 214 PANTHER PTHR40278:SF1 11 204 4.9E-31 T 22-04-2016 RMET_RS16405 57439006186367a988dff834f41f900e 214 Pfam PF05137 Fimbrial assembly protein (PilN) 107 187 5.3E-18 T 22-04-2016 IPR007813 Fimbrial assembly PilN RMET_RS16405 57439006186367a988dff834f41f900e 214 PANTHER PTHR40278 11 204 4.9E-31 T 22-04-2016 RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 SUPERFAMILY SSF81301 1 125 4.25E-28 T 22-04-2016 RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 154 215 1.5E-12 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 Pfam PF01743 Poly A polymerase head domain 3 127 4.3E-16 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 Pfam PF01966 HD domain 235 350 3.3E-10 T 22-04-2016 IPR006674 HD domain RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 412 51.59 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 Gene3D G3DSA:1.10.3090.10 128 365 2.5E-53 T 22-04-2016 RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 PANTHER PTHR13734 1 296 5.5E-69 T 22-04-2016 RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 Gene3D G3DSA:3.30.460.10 1 127 4.6E-29 T 22-04-2016 RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 SUPERFAMILY SSF81891 128 365 8.24E-52 T 22-04-2016 RMET_RS00910 b88b97bcd07eb1601c8d26ea0754e5f9 414 PIRSF PIRSF000813 1 412 9.3E-193 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 Gene3D G3DSA:1.20.1560.10 172 486 2.0E-85 T 22-04-2016 RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 Gene3D G3DSA:3.40.50.300 506 736 7.6E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 ProSitePatterns PS00211 ABC transporters family signature. 643 657 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 SMART SM00382 531 717 7.6E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 Pfam PF00664 ABC transporter transmembrane region 186 458 9.1E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 SUPERFAMILY SSF52540 496 741 7.99E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 Pfam PF00005 ABC transporter 523 671 3.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 SUPERFAMILY SSF90123 172 486 4.71E-79 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS03550 dbd2b294080629529cf2ba50cd0b7951 767 PANTHER PTHR24221 170 750 2.9E-239 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 Gene3D G3DSA:1.20.1250.20 3 179 6.9E-36 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 Gene3D G3DSA:1.20.1250.20 253 412 9.1E-19 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 Gene3D G3DSA:1.20.1250.20 455 481 9.1E-19 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 Pfam PF07690 Major Facilitator Superfamily 7 400 3.9E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 SUPERFAMILY SSF103473 450 478 4.71E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 SUPERFAMILY SSF103473 238 410 4.71E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 SUPERFAMILY SSF103473 2 183 4.71E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 391 410 3.1E-9 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 126 150 3.1E-9 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 192 210 3.1E-9 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 96 116 3.1E-9 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 6 30 3.1E-9 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 PANTHER PTHR23501:SF73 1 496 2.3E-150 T 22-04-2016 RMET_RS00100 fc5fce26741bac1badbcdebb2ac1496b 496 PANTHER PTHR23501 1 496 2.3E-150 T 22-04-2016 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 Gene3D G3DSA:3.40.50.620 264 272 3.9E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 Gene3D G3DSA:3.40.50.620 15 231 3.9E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 PANTHER PTHR23293 199 232 3.9E-68 T 22-04-2016 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 PANTHER PTHR23293 17 179 3.9E-68 T 22-04-2016 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 PANTHER PTHR23293 265 323 3.9E-68 T 22-04-2016 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 PANTHER PTHR23293:SF6 199 232 3.9E-68 T 22-04-2016 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 PANTHER PTHR23293:SF6 17 179 3.9E-68 T 22-04-2016 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 PANTHER PTHR23293:SF6 265 323 3.9E-68 T 22-04-2016 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 SUPERFAMILY SSF52402 21 231 4.19E-62 T 22-04-2016 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 47 276 3.0E-46 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RMET_RS14115 b4ec72985bcca9447ad036786db8d9eb 323 PIRSF PIRSF002936 18 323 1.1E-135 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RMET_RS03975 889fdd3c708893a39066d116b4a2eb2a 97 Pfam PF06803 Protein of unknown function (DUF1232) 35 68 2.2E-11 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 Pfam PF13570 PQQ-like domain 49 89 1.2E-6 T 22-04-2016 IPR025666 Pyrrolo-quinoline quinone-like domain RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 11 380 5.2E-137 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 Pfam PF13360 PQQ-like domain 102 309 1.6E-51 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 Gene3D G3DSA:2.140.10.10 15 380 3.3E-69 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 SUPERFAMILY SSF50998 32 374 7.85E-80 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 7 382 36.595 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 PANTHER PTHR32303:SF8 21 378 2.6E-50 T 22-04-2016 RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 PANTHER PTHR32303 21 378 2.6E-50 T 22-04-2016 RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 SMART SM00564 279 310 3.3 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 SMART SM00564 183 221 450.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 SMART SM00564 66 97 1.2E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 SMART SM00564 105 136 340.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 SMART SM00564 320 351 0.32 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RMET_RS10530 0e6853b16b70badcdaf059dd8e201f38 383 SMART SM00564 144 176 0.83 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RMET_RS10160 ec8e991280b65582fc64cccc584fd577 123 Gene3D G3DSA:3.30.300.20 9 118 1.6E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS10160 ec8e991280b65582fc64cccc584fd577 123 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 9 115 9.0E-25 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RMET_RS10160 ec8e991280b65582fc64cccc584fd577 123 PANTHER PTHR33515 10 123 1.7E-31 T 22-04-2016 RMET_RS10160 ec8e991280b65582fc64cccc584fd577 123 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 13 98 4.0E-45 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RMET_RS10160 ec8e991280b65582fc64cccc584fd577 123 SUPERFAMILY SSF89919 9 114 3.27E-31 T 22-04-2016 IPR023799 Ribosome-binding factor A domain RMET_RS10160 ec8e991280b65582fc64cccc584fd577 123 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 118 20.112 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RMET_RS10160 ec8e991280b65582fc64cccc584fd577 123 Pfam PF02033 Ribosome-binding factor A 10 111 5.6E-29 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RMET_RS15620 edce245f17223ef9e4ed7e17d2e31d70 310 PANTHER PTHR21666 176 293 2.2E-46 T 22-04-2016 RMET_RS15620 edce245f17223ef9e4ed7e17d2e31d70 310 SUPERFAMILY SSF51261 154 289 1.41E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif RMET_RS15620 edce245f17223ef9e4ed7e17d2e31d70 310 Gene3D G3DSA:2.70.70.10 154 290 8.0E-47 T 22-04-2016 RMET_RS15620 edce245f17223ef9e4ed7e17d2e31d70 310 Pfam PF01551 Peptidase family M23 191 285 1.8E-33 T 22-04-2016 IPR016047 Peptidase M23 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 Gene3D G3DSA:3.50.50.60 1 42 4.8E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 Gene3D G3DSA:3.50.50.60 96 168 4.8E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 Gene3D G3DSA:3.50.50.60 263 395 4.8E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 PANTHER PTHR22893:SF29 405 759 1.3E-220 T 22-04-2016 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 421 750 3.1E-64 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 SUPERFAMILY SSF51905 254 363 1.15E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 SUPERFAMILY SSF51905 1 152 1.15E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 Gene3D G3DSA:3.20.20.70 417 758 2.1E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 SUPERFAMILY SSF51395 416 772 2.82E-119 T 22-04-2016 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 131 146 9.7E-10 T 22-04-2016 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 9.7E-10 T 22-04-2016 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 9.7E-10 T 22-04-2016 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 9.7E-10 T 22-04-2016 RMET_RS11055 3c3593e19f3da064be3a5e39e0102838 791 PANTHER PTHR22893 405 759 1.3E-220 T 22-04-2016 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 SUPERFAMILY SSF46785 7 112 9.19E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 Gene3D G3DSA:3.40.190.10 94 172 1.3E-17 T 22-04-2016 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 Gene3D G3DSA:1.10.10.10 4 82 2.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 SUPERFAMILY SSF53850 91 282 3.08E-22 T 22-04-2016 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 PANTHER PTHR30537 2 299 2.8E-63 T 22-04-2016 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 Gene3D G3DSA:3.40.190.10 173 252 7.6E-16 T 22-04-2016 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 PANTHER PTHR30537:SF16 2 299 2.8E-63 T 22-04-2016 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.5E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS05920 a27abbdc5c54dda6ad35f0783ffb7f83 299 Pfam PF03466 LysR substrate binding domain 91 282 5.4E-22 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS07745 7d0e3486e12df73cc1c2386b5fbb7c57 380 PIRSF PIRSF005622 1 374 3.6E-156 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 RMET_RS07745 7d0e3486e12df73cc1c2386b5fbb7c57 380 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 371 5.3E-141 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 RMET_RS07745 7d0e3486e12df73cc1c2386b5fbb7c57 380 PANTHER PTHR30149:SF0 2 380 2.8E-197 T 22-04-2016 RMET_RS07745 7d0e3486e12df73cc1c2386b5fbb7c57 380 Pfam PF01924 Hydrogenase formation hypA family 12 369 1.9E-154 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 RMET_RS07745 7d0e3486e12df73cc1c2386b5fbb7c57 380 PANTHER PTHR30149 2 380 2.8E-197 T 22-04-2016 RMET_RS03625 cc7568183aa54ae8cc58ffd3ff7d1ca4 219 Pfam PF02224 Cytidylate kinase 7 214 1.5E-71 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RMET_RS03625 cc7568183aa54ae8cc58ffd3ff7d1ca4 219 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 213 6.2E-72 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RMET_RS03625 cc7568183aa54ae8cc58ffd3ff7d1ca4 219 PANTHER PTHR21299 4 219 2.2E-66 T 22-04-2016 RMET_RS03625 cc7568183aa54ae8cc58ffd3ff7d1ca4 219 Gene3D G3DSA:3.40.50.300 6 215 1.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03625 cc7568183aa54ae8cc58ffd3ff7d1ca4 219 Hamap MF_00238 Cytidylate kinase [cmk]. 5 219 32.121 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RMET_RS03625 cc7568183aa54ae8cc58ffd3ff7d1ca4 219 SUPERFAMILY SSF52540 6 215 4.61E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 PANTHER PTHR23023:SF30 8 472 6.0E-220 T 22-04-2016 RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 SUPERFAMILY SSF51905 12 395 2.05E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 Gene3D G3DSA:3.50.50.60 11 221 4.5E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 Gene3D G3DSA:3.50.50.60 328 472 1.2E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 63 2.4E-6 T 22-04-2016 RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 2.9E-5 T 22-04-2016 RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 2.9E-5 T 22-04-2016 RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 Pfam PF00743 Flavin-binding monooxygenase-like 86 227 1.3E-15 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 RMET_RS05090 0f95e53cd8e28fc919a8408450577f07 505 PANTHER PTHR23023 8 472 6.0E-220 T 22-04-2016 RMET_RS05460 6a3206ee1de286794a272ed4559cb2f2 261 Gene3D G3DSA:1.10.1670.10 203 257 8.2E-18 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RMET_RS05460 6a3206ee1de286794a272ed4559cb2f2 261 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 100 239 3.4E-14 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RMET_RS05460 6a3206ee1de286794a272ed4559cb2f2 261 PANTHER PTHR10242 63 252 3.7E-58 T 22-04-2016 RMET_RS05460 6a3206ee1de286794a272ed4559cb2f2 261 PANTHER PTHR10242:SF0 63 252 3.7E-58 T 22-04-2016 RMET_RS05460 6a3206ee1de286794a272ed4559cb2f2 261 Gene3D G3DSA:1.10.340.30 94 200 2.6E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RMET_RS05460 6a3206ee1de286794a272ed4559cb2f2 261 SMART SM00478 103 255 7.3E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RMET_RS05460 6a3206ee1de286794a272ed4559cb2f2 261 SUPERFAMILY SSF48150 83 253 1.15E-45 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RMET_RS05250 5c3f4f79a6bc6d02837f5027abceb2a5 338 SUPERFAMILY SSF53697 89 275 9.22E-41 T 22-04-2016 RMET_RS05250 5c3f4f79a6bc6d02837f5027abceb2a5 338 PANTHER PTHR30514:SF1 1 294 4.8E-74 T 22-04-2016 RMET_RS05250 5c3f4f79a6bc6d02837f5027abceb2a5 338 PANTHER PTHR30514 1 294 4.8E-74 T 22-04-2016 RMET_RS05250 5c3f4f79a6bc6d02837f5027abceb2a5 338 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 71 7.1E-18 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RMET_RS05250 5c3f4f79a6bc6d02837f5027abceb2a5 338 Pfam PF01380 SIS domain 122 247 1.7E-20 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RMET_RS05250 5c3f4f79a6bc6d02837f5027abceb2a5 338 Gene3D G3DSA:3.40.50.10490 92 260 1.2E-37 T 22-04-2016 RMET_RS05250 5c3f4f79a6bc6d02837f5027abceb2a5 338 SUPERFAMILY SSF46689 3 76 7.7E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS05250 5c3f4f79a6bc6d02837f5027abceb2a5 338 Gene3D G3DSA:1.10.10.10 2 77 7.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 PANTHER PTHR10909 39 474 3.5E-166 T 22-04-2016 RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 413 432 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 188 288 5.8E-15 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 SUPERFAMILY SSF47203 304 457 2.09E-40 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 SUPERFAMILY SSF56645 59 306 1.83E-30 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 Gene3D G3DSA:1.20.140.10 290 460 2.0E-40 T 22-04-2016 RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 299 454 2.6E-34 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 PANTHER PTHR10909:SF289 39 474 3.5E-166 T 22-04-2016 RMET_RS00820 5b8eed4898974ca487ea413eab5c143c 561 Gene3D G3DSA:2.40.110.10 188 289 3.9E-17 T 22-04-2016 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 Gene3D G3DSA:1.10.540.10 4 126 8.8E-45 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 Gene3D G3DSA:1.20.140.10 224 390 3.1E-60 T 22-04-2016 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 Gene3D G3DSA:2.40.110.10 127 223 4.2E-41 T 22-04-2016 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 SUPERFAMILY SSF56645 7 248 4.84E-88 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 388 1.7E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 1.1E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 PANTHER PTHR10909 9 393 6.5E-263 T 22-04-2016 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 SUPERFAMILY SSF47203 234 390 5.8E-44 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 PANTHER PTHR10909:SF326 9 393 6.5E-263 T 22-04-2016 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS00530 fdadfb4ad010638178e8b2903ebc05fe 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 1.5E-39 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 Gene3D G3DSA:3.65.10.10 22 239 4.9E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 SUPERFAMILY SSF55205 1 434 1.96E-125 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 435 2.1E-137 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 Gene3D G3DSA:3.65.10.10 240 433 2.0E-70 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 ProSitePatterns PS00104 EPSP synthase signature 1. 87 101 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 437 32.943 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 PANTHER PTHR21090 1 432 3.0E-189 T 22-04-2016 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 PIRSF PIRSF000505 4 437 3.2E-140 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 PANTHER PTHR21090:SF21 1 432 3.0E-189 T 22-04-2016 RMET_RS03615 1d7dced53179654f632b284cd7a3cbc5 437 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 431 2.3E-130 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RMET_RS10915 d62b030263dfa1ad37095bf709f56cdd 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 2.5E-23 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RMET_RS10915 d62b030263dfa1ad37095bf709f56cdd 73 PANTHER PTHR33370 2 73 7.9E-35 T 22-04-2016 RMET_RS10915 d62b030263dfa1ad37095bf709f56cdd 73 Gene3D G3DSA:2.40.50.140 2 72 2.3E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10915 d62b030263dfa1ad37095bf709f56cdd 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.4E-30 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RMET_RS10915 d62b030263dfa1ad37095bf709f56cdd 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 24.864 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RMET_RS10915 d62b030263dfa1ad37095bf709f56cdd 73 SUPERFAMILY SSF50249 1 71 2.0E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 SUPERFAMILY SSF55021 417 510 1.69E-27 T 22-04-2016 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 416 1.2E-27 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 510 2.7E-22 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 PANTHER PTHR10314 7 366 4.6E-202 T 22-04-2016 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 Gene3D G3DSA:3.40.1020.10 337 510 5.9E-59 T 22-04-2016 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 PANTHER PTHR10314:SF30 7 366 4.6E-202 T 22-04-2016 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 9 510 8.6E-242 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 Gene3D G3DSA:3.40.50.1100 74 332 7.5E-81 T 22-04-2016 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 314 6.7E-76 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS01795 ae0061666e0ba8d30bc3c1e7053bc7ef 511 SUPERFAMILY SSF53686 9 363 6.16E-95 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS10955 940cbf995e722dd09094886e670cf58e 262 SUPERFAMILY SSF52540 16 246 5.68E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10955 940cbf995e722dd09094886e670cf58e 262 Pfam PF00005 ABC transporter 31 186 5.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS10955 940cbf995e722dd09094886e670cf58e 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 16 262 2.0E-120 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RMET_RS10955 940cbf995e722dd09094886e670cf58e 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS10955 940cbf995e722dd09094886e670cf58e 262 PANTHER PTHR24220:SF560 17 257 4.1E-169 T 22-04-2016 RMET_RS10955 940cbf995e722dd09094886e670cf58e 262 SMART SM00382 40 234 5.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10955 940cbf995e722dd09094886e670cf58e 262 Gene3D G3DSA:3.40.50.300 16 256 4.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10955 940cbf995e722dd09094886e670cf58e 262 PANTHER PTHR24220 17 257 4.1E-169 T 22-04-2016 RMET_RS06880 cc118bac3aef7c1812167bb3ee0565b3 543 Pfam PF03929 PepSY-associated TM region 12 380 2.2E-56 T 22-04-2016 IPR005625 PepSY-associated TM protein RMET_RS06880 cc118bac3aef7c1812167bb3ee0565b3 543 PANTHER PTHR34219:SF3 1 518 3.3E-95 T 22-04-2016 RMET_RS06880 cc118bac3aef7c1812167bb3ee0565b3 543 PANTHER PTHR34219 1 518 3.3E-95 T 22-04-2016 RMET_RS19510 e563765922395f4082e94bbfa2c038a7 332 PANTHER PTHR11851:SF140 43 331 4.5E-50 T 22-04-2016 RMET_RS19510 e563765922395f4082e94bbfa2c038a7 332 SUPERFAMILY SSF63411 277 332 4.71E-12 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RMET_RS19510 e563765922395f4082e94bbfa2c038a7 332 SUPERFAMILY SSF63411 42 266 2.44E-37 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RMET_RS19510 e563765922395f4082e94bbfa2c038a7 332 Gene3D G3DSA:3.30.830.10 47 241 8.5E-32 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RMET_RS19510 e563765922395f4082e94bbfa2c038a7 332 Pfam PF05193 Peptidase M16 inactive domain 213 331 1.1E-18 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RMET_RS19510 e563765922395f4082e94bbfa2c038a7 332 PANTHER PTHR11851 43 331 4.5E-50 T 22-04-2016 RMET_RS19510 e563765922395f4082e94bbfa2c038a7 332 Gene3D G3DSA:3.30.830.10 275 331 1.6E-8 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 PANTHER PTHR14226:SF37 153 474 1.6E-77 T 22-04-2016 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 PANTHER PTHR14226:SF37 44 137 1.6E-77 T 22-04-2016 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 Pfam PF07244 Surface antigen variable number repeat 363 425 1.8E-4 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 Pfam PF01103 Surface antigen 442 673 1.1E-7 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 PANTHER PTHR14226 153 474 1.6E-77 T 22-04-2016 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 PANTHER PTHR14226 44 137 1.6E-77 T 22-04-2016 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 Pfam PF01734 Patatin-like phospholipase 51 242 2.0E-25 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 SUPERFAMILY SSF52151 148 269 8.37E-55 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 SUPERFAMILY SSF52151 46 119 8.37E-55 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS03060 d5ad5c9d903775915fe590461e81e9f0 767 Gene3D G3DSA:3.40.1090.10 51 244 5.4E-13 T 22-04-2016 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 Gene3D G3DSA:3.40.190.10 183 248 3.0E-7 T 22-04-2016 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 Pfam PF03466 LysR substrate binding domain 89 290 1.6E-24 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 PANTHER PTHR30126:SF29 3 291 3.8E-71 T 22-04-2016 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 Gene3D G3DSA:1.10.10.10 2 80 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 PANTHER PTHR30126 3 291 3.8E-71 T 22-04-2016 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 SUPERFAMILY SSF53850 90 291 1.39E-29 T 22-04-2016 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 SUPERFAMILY SSF46785 4 89 8.16E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02580 9c372467c0afc415301fa8445ab04ecf 299 Gene3D G3DSA:3.40.190.10 95 182 1.0E-8 T 22-04-2016 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 Gene3D G3DSA:3.40.449.10 12 248 1.9E-103 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 14 617 51.704 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 SUPERFAMILY SSF53795 249 617 3.43E-157 T 22-04-2016 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 273 281 - T 22-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 Pfam PF00821 Phosphoenolpyruvate carboxykinase 26 616 1.2E-286 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 PANTHER PTHR11561 19 618 0.0 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 PIRSF PIRSF001348 1 618 1.6E-290 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 Gene3D G3DSA:3.90.228.20 339 616 1.2E-97 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 Gene3D G3DSA:3.90.228.20 249 320 8.6E-32 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RMET_RS17970 0cec64b3b42e6ea4cab73cafab0f1116 618 SUPERFAMILY SSF68923 9 248 4.08E-104 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RMET_RS06260 eb2488c5680c5246b697f86d96c33194 330 PANTHER PTHR30349 38 317 5.4E-25 T 22-04-2016 RMET_RS06260 eb2488c5680c5246b697f86d96c33194 330 PANTHER PTHR30349:SF5 38 317 5.4E-25 T 22-04-2016 RMET_RS06260 eb2488c5680c5246b697f86d96c33194 330 Pfam PF00589 Phage integrase family 120 305 4.7E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06260 eb2488c5680c5246b697f86d96c33194 330 SUPERFAMILY SSF56349 13 310 2.09E-37 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS06260 eb2488c5680c5246b697f86d96c33194 330 Gene3D G3DSA:1.10.150.130 35 100 4.1E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS06260 eb2488c5680c5246b697f86d96c33194 330 Gene3D G3DSA:1.10.443.10 117 311 1.2E-30 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06260 eb2488c5680c5246b697f86d96c33194 330 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 35 91 1.1E-4 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS04655 e101e96cd6a908ba447d6cc5cded167c 122 PANTHER PTHR34182 6 117 1.9E-25 T 22-04-2016 RMET_RS04655 e101e96cd6a908ba447d6cc5cded167c 122 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 5.9E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RMET_RS04655 e101e96cd6a908ba447d6cc5cded167c 122 Pfam PF03840 Preprotein translocase SecG subunit 7 75 6.8E-21 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RMET_RS04655 e101e96cd6a908ba447d6cc5cded167c 122 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 7.8E-34 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RMET_RS04655 e101e96cd6a908ba447d6cc5cded167c 122 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 7.8E-34 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RMET_RS04655 e101e96cd6a908ba447d6cc5cded167c 122 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 7.8E-34 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RMET_RS04655 e101e96cd6a908ba447d6cc5cded167c 122 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 7.8E-34 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RMET_RS15295 68f4acd96316abf7e18c2f4f1a70ba4c 320 SUPERFAMILY SSF143865 1 258 4.84E-39 T 22-04-2016 RMET_RS15295 68f4acd96316abf7e18c2f4f1a70ba4c 320 Pfam PF01544 CorA-like Mg2+ transporter protein 29 315 8.2E-59 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RMET_RS15295 68f4acd96316abf7e18c2f4f1a70ba4c 320 PANTHER PTHR21535:SF37 1 319 3.1E-98 T 22-04-2016 RMET_RS15295 68f4acd96316abf7e18c2f4f1a70ba4c 320 Gene3D G3DSA:3.30.460.20 2 130 1.3E-4 T 22-04-2016 RMET_RS15295 68f4acd96316abf7e18c2f4f1a70ba4c 320 PANTHER PTHR21535 1 319 3.1E-98 T 22-04-2016 RMET_RS15295 68f4acd96316abf7e18c2f4f1a70ba4c 320 SUPERFAMILY SSF144083 254 317 9.81E-21 T 22-04-2016 RMET_RS15295 68f4acd96316abf7e18c2f4f1a70ba4c 320 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 2 319 2.3E-75 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 RMET_RS15295 68f4acd96316abf7e18c2f4f1a70ba4c 320 Gene3D G3DSA:1.20.58.340 243 319 4.1E-28 T 22-04-2016 RMET_RS03895 6901c94e6705639a324820a76fce6ce9 447 SUPERFAMILY SSF103473 12 426 1.19E-75 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS03895 6901c94e6705639a324820a76fce6ce9 447 Gene3D G3DSA:1.20.1250.20 23 214 3.4E-34 T 22-04-2016 RMET_RS03895 6901c94e6705639a324820a76fce6ce9 447 Pfam PF07690 Major Facilitator Superfamily 31 378 8.0E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS03895 6901c94e6705639a324820a76fce6ce9 447 Gene3D G3DSA:1.20.1250.20 231 427 3.7E-24 T 22-04-2016 RMET_RS03895 6901c94e6705639a324820a76fce6ce9 447 PANTHER PTHR23505 18 437 5.2E-64 T 22-04-2016 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 Gene3D G3DSA:1.10.10.10 1 81 5.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 SUPERFAMILY SSF53850 91 300 9.77E-40 T 22-04-2016 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 Gene3D G3DSA:3.40.190.10 91 183 1.7E-21 T 22-04-2016 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 SUPERFAMILY SSF46785 12 113 1.97E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 Pfam PF03466 LysR substrate binding domain 89 291 4.8E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 PANTHER PTHR30126:SF6 1 309 3.0E-135 T 22-04-2016 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 64 1.9E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 PANTHER PTHR30126 1 309 3.0E-135 T 22-04-2016 RMET_RS14140 97df0e6fd8e8c4db4b4134ea0f8787df 313 Gene3D G3DSA:3.40.190.10 184 260 4.1E-25 T 22-04-2016 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 Pfam PF00072 Response regulator receiver domain 15 124 5.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 SMART SM00421 148 205 1.4E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 Gene3D G3DSA:1.10.10.10 157 208 8.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 SUPERFAMILY SSF52172 12 155 7.97E-37 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 Gene3D G3DSA:3.40.50.2300 13 156 1.0E-37 T 22-04-2016 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 SUPERFAMILY SSF46894 139 208 3.03E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 PANTHER PTHR26402:SF613 13 206 7.2E-70 T 22-04-2016 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 PANTHER PTHR26402 13 206 7.2E-70 T 22-04-2016 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 SMART SM00448 13 124 4.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.5E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.5E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS06025 563d0c882fa0960f15d91ef23e314539 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.5E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS17115 654b19c5e98ad7ea74087887f68f05cb 392 TIGRFAM TIGR03472 HpnI: hopanoid biosynthesis associated glycosyl transferase protein HpnI 5 358 2.5E-143 T 22-04-2016 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI RMET_RS17115 654b19c5e98ad7ea74087887f68f05cb 392 PANTHER PTHR12726 5 271 8.0E-55 T 22-04-2016 RMET_RS17115 654b19c5e98ad7ea74087887f68f05cb 392 SUPERFAMILY SSF53448 42 292 2.09E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS17115 654b19c5e98ad7ea74087887f68f05cb 392 Gene3D G3DSA:3.90.550.10 43 259 2.4E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS17115 654b19c5e98ad7ea74087887f68f05cb 392 Pfam PF13506 Glycosyl transferase family 21 97 271 2.3E-51 T 22-04-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 139 150 9.0E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 167 179 9.0E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 138 9.0E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 PANTHER PTHR33516 1 218 2.8E-81 T 22-04-2016 RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 SUPERFAMILY SSF51306 92 214 1.74E-32 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 Gene3D G3DSA:1.10.10.10 1 68 6.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 Pfam PF00717 Peptidase S24-like 131 195 1.4E-14 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 PANTHER PTHR33516:SF2 1 218 2.8E-81 T 22-04-2016 RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 SUPERFAMILY SSF46785 3 68 3.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 Pfam PF01726 LexA DNA binding domain 1 65 2.3E-28 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 Gene3D G3DSA:2.10.109.10 93 215 4.3E-40 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 Hamap MF_00015 LexA repressor [lexA]. 3 216 31.422 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RMET_RS09930 3755828a20eed249a77ce289f79ef4a5 218 TIGRFAM TIGR00498 lexA: repressor LexA 1 215 1.3E-68 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 73 7.5E-24 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 PANTHER PTHR35177:SF2 1 68 4.7E-24 T 22-04-2016 RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 5.6E-22 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 5.6E-22 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 5.6E-22 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 5.6E-22 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 PANTHER PTHR35177 1 68 4.7E-24 T 22-04-2016 RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 SUPERFAMILY SSF159127 1 74 3.27E-25 T 22-04-2016 RMET_RS07740 03ceb000d64ca6ba6e3c91917fb0190c 78 Pfam PF01455 HupF/HypC family 1 66 5.9E-28 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PANTHER PTHR24322 10 138 4.0E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PANTHER PTHR24322 154 186 4.0E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.7E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 7.7E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.7E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.7E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.7E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.7E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PANTHER PTHR24322:SF328 10 138 4.0E-62 T 22-04-2016 RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PANTHER PTHR24322:SF328 154 186 4.0E-62 T 22-04-2016 RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 Gene3D G3DSA:3.40.50.720 2 246 1.2E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 2.3E-6 T 22-04-2016 RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 4.2E-71 T 22-04-2016 RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS15320 858c9d670910822dd2d93307cee753a7 246 SUPERFAMILY SSF51735 4 246 1.23E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12925 b056e6235a7778267470f819717b585a 216 Pfam PF00994 Probable molybdopterin binding domain 23 165 3.7E-28 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12925 b056e6235a7778267470f819717b585a 216 SUPERFAMILY SSF53218 19 208 2.75E-45 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12925 b056e6235a7778267470f819717b585a 216 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 84 97 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RMET_RS12925 b056e6235a7778267470f819717b585a 216 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 20 165 7.9E-34 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12925 b056e6235a7778267470f819717b585a 216 SMART SM00852 22 172 2.2E-21 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS12925 b056e6235a7778267470f819717b585a 216 PANTHER PTHR10192 12 207 5.8E-75 T 22-04-2016 RMET_RS12925 b056e6235a7778267470f819717b585a 216 Gene3D G3DSA:3.40.980.10 19 209 6.5E-49 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 SUPERFAMILY SSF55021 79 162 2.29E-25 T 22-04-2016 RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 PANTHER PTHR30239 1 161 2.0E-83 T 22-04-2016 RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 6.9E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 SUPERFAMILY SSF55021 1 76 2.11E-22 T 22-04-2016 RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 Gene3D G3DSA:3.30.70.1150 83 162 1.5E-28 T 22-04-2016 RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-37 T 22-04-2016 RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 Gene3D G3DSA:3.30.70.260 1 78 4.6E-37 T 22-04-2016 RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 1.5E-63 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS04595 72bd24e2942ba3fc6728d15532cfe3b7 163 Pfam PF13710 ACT domain 12 73 4.8E-15 T 22-04-2016 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 PANTHER PTHR12128:SF34 10 296 4.4E-73 T 22-04-2016 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 SMART SM01130 9 292 6.9E-95 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 3.9E-14 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 3.9E-14 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 3.9E-14 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 PIRSF PIRSF001365 6 298 2.4E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 9 291 43.159 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 Gene3D G3DSA:3.20.20.70 2 293 1.8E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 PANTHER PTHR12128 10 296 4.4E-73 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 SUPERFAMILY SSF51569 8 293 2.62E-81 T 22-04-2016 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 17 288 5.4E-68 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS03360 9688073fec282fb3bed548ed949b6ee2 302 Pfam PF00701 Dihydrodipicolinate synthetase family 10 289 2.7E-57 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS02095 6e4dc5e6cf2d0c834576db577b51a41e 380 SUPERFAMILY SSF53067 10 44 2.36E-26 T 22-04-2016 RMET_RS02095 6e4dc5e6cf2d0c834576db577b51a41e 380 SUPERFAMILY SSF53067 71 116 2.36E-26 T 22-04-2016 RMET_RS02095 6e4dc5e6cf2d0c834576db577b51a41e 380 SUPERFAMILY SSF53067 150 352 2.36E-26 T 22-04-2016 RMET_RS02095 6e4dc5e6cf2d0c834576db577b51a41e 380 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 9 380 40.572 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 RMET_RS02095 6e4dc5e6cf2d0c834576db577b51a41e 380 Pfam PF03702 Uncharacterised protein family (UPF0075) 10 379 5.9E-135 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 RMET_RS02095 6e4dc5e6cf2d0c834576db577b51a41e 380 PANTHER PTHR30605:SF0 3 379 1.6E-139 T 22-04-2016 RMET_RS02095 6e4dc5e6cf2d0c834576db577b51a41e 380 PANTHER PTHR30605 3 379 1.6E-139 T 22-04-2016 RMET_RS02095 6e4dc5e6cf2d0c834576db577b51a41e 380 Gene3D G3DSA:3.30.420.40 152 338 1.7E-68 T 22-04-2016 RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 PANTHER PTHR23501 6 498 5.4E-181 T 22-04-2016 RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 Gene3D G3DSA:1.20.1250.20 272 429 5.6E-17 T 22-04-2016 RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 Gene3D G3DSA:1.20.1250.20 479 490 5.6E-17 T 22-04-2016 RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 PANTHER PTHR23501:SF69 6 498 5.4E-181 T 22-04-2016 RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 497 7.4E-124 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 SUPERFAMILY SSF103473 474 503 1.24E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 SUPERFAMILY SSF103473 257 428 1.24E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 SUPERFAMILY SSF103473 12 207 1.24E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 Pfam PF07690 Major Facilitator Superfamily 25 418 2.5E-58 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS08170 6c37f66727822a8c9bb269e864dced79 514 Gene3D G3DSA:1.20.1250.20 20 199 3.2E-34 T 22-04-2016 RMET_RS17330 9e7941807ae6e52ffc3b56fca6c765b0 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.8E-31 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RMET_RS17330 9e7941807ae6e52ffc3b56fca6c765b0 259 PIRSF PIRSF006241 1 259 1.0E-94 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RMET_RS17330 9e7941807ae6e52ffc3b56fca6c765b0 259 PANTHER PTHR12110 1 253 2.0E-93 T 22-04-2016 RMET_RS17330 9e7941807ae6e52ffc3b56fca6c765b0 259 SUPERFAMILY SSF51658 1 255 1.28E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RMET_RS17330 9e7941807ae6e52ffc3b56fca6c765b0 259 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 253 5.2E-114 T 22-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 RMET_RS17330 9e7941807ae6e52ffc3b56fca6c765b0 259 PANTHER PTHR12110:SF3 1 253 2.0E-93 T 22-04-2016 RMET_RS17330 9e7941807ae6e52ffc3b56fca6c765b0 259 Gene3D G3DSA:3.20.20.150 1 254 1.1E-90 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 SUPERFAMILY SSF52954 333 435 1.66E-19 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 PANTHER PTHR11476:SF9 1 441 8.9E-199 T 22-04-2016 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 PIRSF PIRSF001549 9 437 3.5E-113 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 PANTHER PTHR11476 1 441 8.9E-199 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 10 443 32.327 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 Gene3D G3DSA:3.40.50.800 332 434 2.4E-31 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 Pfam PF13393 Histidyl-tRNA synthetase 17 319 1.7E-47 T 22-04-2016 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 Gene3D G3DSA:3.30.930.10 228 330 4.2E-93 T 22-04-2016 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 Gene3D G3DSA:3.30.930.10 12 192 4.2E-93 T 22-04-2016 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 SUPERFAMILY SSF55681 13 330 2.58E-98 T 22-04-2016 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 14 414 5.6E-152 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RMET_RS10540 3f98ee8e82d6907c622ed3b25b86e3cc 447 Pfam PF03129 Anticodon binding domain 346 434 1.2E-11 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS06125 e747c5a8df8273c2fac4fc07b6009351 262 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 246 44.454 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RMET_RS06125 e747c5a8df8273c2fac4fc07b6009351 262 SUPERFAMILY SSF55729 83 245 1.09E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS06125 e747c5a8df8273c2fac4fc07b6009351 262 PIRSF PIRSF037208 3 255 4.8E-89 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RMET_RS06125 e747c5a8df8273c2fac4fc07b6009351 262 PANTHER PTHR21367 20 242 4.8E-56 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase RMET_RS06125 e747c5a8df8273c2fac4fc07b6009351 262 PANTHER PTHR21367:SF0 20 242 4.8E-56 T 22-04-2016 RMET_RS06125 e747c5a8df8273c2fac4fc07b6009351 262 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 237 1.9E-36 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 RMET_RS06125 e747c5a8df8273c2fac4fc07b6009351 262 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 5.4E-18 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 PANTHER PTHR11728 1 342 8.4E-109 T 22-04-2016 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 191 331 1.4E-48 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 333 34.114 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 199 220 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 SUPERFAMILY SSF51735 1 191 5.82E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01300 03ca781652b68562464a40579ff4828e 342 SUPERFAMILY SSF48179 190 342 5.24E-54 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 Gene3D G3DSA:3.40.50.720 1 194 2.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01300 03ca781652b68562464a40579ff4828e 342 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 167 1.0E-32 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 9.0E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 249 266 9.0E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 209 233 9.0E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 9.0E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 184 208 9.0E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 PIRSF PIRSF000114 1 342 1.5E-91 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RMET_RS01300 03ca781652b68562464a40579ff4828e 342 Gene3D G3DSA:1.10.1040.10 195 337 8.8E-55 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 Pfam PF06505 Activator of aromatic catabolism 11 114 1.2E-34 T 22-04-2016 IPR010523 Activator of aromatic catabolism RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 SMART SM00382 251 403 1.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 Pfam PF00158 Sigma-54 interaction domain 231 397 1.6E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 255 268 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 317 332 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 SUPERFAMILY SSF52540 230 473 9.26E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 509 526 2.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 526 542 2.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 Gene3D G3DSA:1.10.10.60 499 542 1.1E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 29 133 1.0E-56 T 22-04-2016 IPR010523 Activator of aromatic catabolism RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 Pfam PF02830 V4R domain 126 187 1.6E-10 T 22-04-2016 IPR004096 4-vinyl reductase, 4VR RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 Gene3D G3DSA:3.40.50.300 228 403 2.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 Gene3D G3DSA:3.30.1380.20 24 191 3.1E-11 T 22-04-2016 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 PANTHER PTHR32071 227 542 1.3E-146 T 22-04-2016 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 SMART SM00989 125 187 3.1E-18 T 22-04-2016 IPR004096 4-vinyl reductase, 4VR RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 Gene3D G3DSA:1.10.8.60 404 480 2.8E-25 T 22-04-2016 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 Pfam PF02954 Bacterial regulatory protein, Fis family 502 542 1.6E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 444 453 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS08955 bfdc1a8932434485f476ec64433f5ad0 542 SUPERFAMILY SSF46689 444 542 2.73E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS03050 ef27177eac114befd6b58c462ef60bf9 429 Pfam PF05231 MASE1 12 294 5.2E-32 T 22-04-2016 IPR007895 MASE1 RMET_RS03050 ef27177eac114befd6b58c462ef60bf9 429 SUPERFAMILY SSF55785 292 409 2.62E-8 T 22-04-2016 IPR000014 PAS domain RMET_RS03050 ef27177eac114befd6b58c462ef60bf9 429 Gene3D G3DSA:3.30.450.20 285 419 4.3E-15 T 22-04-2016 RMET_RS03050 ef27177eac114befd6b58c462ef60bf9 429 Pfam PF08447 PAS fold 329 409 3.2E-6 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 RMET_RS10395 ab764fdfc5f9c906827bfb79a80bd676 244 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 89 109 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS10395 ab764fdfc5f9c906827bfb79a80bd676 244 Pfam PF00484 Carbonic anhydrase 37 200 1.4E-47 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS10395 ab764fdfc5f9c906827bfb79a80bd676 244 Gene3D G3DSA:3.40.1050.10 1 212 2.2E-66 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS10395 ab764fdfc5f9c906827bfb79a80bd676 244 SUPERFAMILY SSF53056 2 214 1.44E-61 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS10395 ab764fdfc5f9c906827bfb79a80bd676 244 SMART SM00947 30 205 2.2E-57 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS10395 ab764fdfc5f9c906827bfb79a80bd676 244 PANTHER PTHR11002 1 220 4.8E-72 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS10395 ab764fdfc5f9c906827bfb79a80bd676 244 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS14285 8431d30afc015272cf22dc7d09f09802 251 Pfam PF01435 Peptidase family M48 93 246 7.3E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RMET_RS14285 8431d30afc015272cf22dc7d09f09802 251 PANTHER PTHR22726 1 248 5.6E-104 T 22-04-2016 RMET_RS14285 8431d30afc015272cf22dc7d09f09802 251 PANTHER PTHR22726:SF4 1 248 5.6E-104 T 22-04-2016 RMET_RS14285 8431d30afc015272cf22dc7d09f09802 251 Gene3D G3DSA:3.30.2010.10 75 146 6.8E-19 T 22-04-2016 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 SUPERFAMILY SSF50156 94 183 5.03E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 384 7.1E-97 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 SMART SM00245 173 382 1.6E-59 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 SUPERFAMILY SSF52096 192 386 5.96E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 SUPERFAMILY SSF52096 37 118 5.96E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 Pfam PF03572 Peptidase family S41 200 381 5.0E-52 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 SMART SM00228 100 171 3.4E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 Gene3D G3DSA:2.30.42.10 107 182 5.2E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 Gene3D G3DSA:3.90.226.10 183 384 3.1E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 Gene3D G3DSA:3.90.226.10 449 475 3.1E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 PANTHER PTHR32060 53 275 3.5E-114 T 22-04-2016 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 PANTHER PTHR32060 292 451 3.5E-114 T 22-04-2016 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 Pfam PF13180 PDZ domain 100 179 1.2E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS01270 591b2560becec5ba7b0d0884c7c57504 535 Gene3D G3DSA:3.30.750.44 53 106 4.2E-10 T 22-04-2016 RMET_RS01095 bf314c3fc866a6d935f036688f12b11c 313 PANTHER PTHR24220:SF519 64 310 1.4E-127 T 22-04-2016 RMET_RS01095 bf314c3fc866a6d935f036688f12b11c 313 SMART SM00382 87 288 5.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01095 bf314c3fc866a6d935f036688f12b11c 313 SUPERFAMILY SSF52540 61 310 2.47E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01095 bf314c3fc866a6d935f036688f12b11c 313 PANTHER PTHR24220 64 310 1.4E-127 T 22-04-2016 RMET_RS01095 bf314c3fc866a6d935f036688f12b11c 313 Pfam PF00005 ABC transporter 78 239 1.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS01095 bf314c3fc866a6d935f036688f12b11c 313 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 288 310 3.5E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS01095 bf314c3fc866a6d935f036688f12b11c 313 Gene3D G3DSA:3.40.50.300 60 309 5.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06085 ef006c6abb74d15a47bb07f57d7eeed3 241 PANTHER PTHR30296 2 238 1.2E-90 T 22-04-2016 RMET_RS06085 ef006c6abb74d15a47bb07f57d7eeed3 241 Pfam PF02754 Cysteine-rich domain 4 84 2.8E-14 T 22-04-2016 IPR004017 Cysteine-rich domain RMET_RS06085 ef006c6abb74d15a47bb07f57d7eeed3 241 Pfam PF02754 Cysteine-rich domain 132 216 2.2E-14 T 22-04-2016 IPR004017 Cysteine-rich domain RMET_RS06085 ef006c6abb74d15a47bb07f57d7eeed3 241 PANTHER PTHR30296:SF0 2 238 1.2E-90 T 22-04-2016 RMET_RS18025 eded8b37d9edc9684623abeb806985e8 415 PANTHER PTHR30158:SF3 1 395 5.2E-155 T 22-04-2016 RMET_RS18025 eded8b37d9edc9684623abeb806985e8 415 SUPERFAMILY SSF111369 51 298 4.18E-78 T 22-04-2016 RMET_RS18025 eded8b37d9edc9684623abeb806985e8 415 PANTHER PTHR30158 1 395 5.2E-155 T 22-04-2016 RMET_RS18025 eded8b37d9edc9684623abeb806985e8 415 Pfam PF00529 HlyD membrane-fusion protein of T1SS 45 357 1.1E-7 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS18025 eded8b37d9edc9684623abeb806985e8 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 371 3.0E-84 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS18025 eded8b37d9edc9684623abeb806985e8 415 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 291 3.5E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS18025 eded8b37d9edc9684623abeb806985e8 415 Gene3D G3DSA:2.40.50.100 62 95 3.4E-24 T 22-04-2016 RMET_RS18025 eded8b37d9edc9684623abeb806985e8 415 Gene3D G3DSA:2.40.50.100 170 204 3.4E-24 T 22-04-2016 RMET_RS14335 83b77d7346687902482c9718b22b5cc3 317 SUPERFAMILY SSF53850 26 246 5.17E-39 T 22-04-2016 RMET_RS14335 83b77d7346687902482c9718b22b5cc3 317 SMART SM00062 28 274 0.0066 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS14335 83b77d7346687902482c9718b22b5cc3 317 PANTHER PTHR30024 7 280 3.5E-88 T 22-04-2016 RMET_RS14335 83b77d7346687902482c9718b22b5cc3 317 Gene3D G3DSA:3.40.190.10 115 230 9.4E-21 T 22-04-2016 RMET_RS14335 83b77d7346687902482c9718b22b5cc3 317 PANTHER PTHR30024:SF14 7 280 3.5E-88 T 22-04-2016 RMET_RS14335 83b77d7346687902482c9718b22b5cc3 317 Pfam PF09084 NMT1/THI5 like 37 246 1.7E-23 T 22-04-2016 IPR015168 SsuA/THI5-like RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 414 4.0E-157 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 415 40.5 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 299 392 7.0E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 SUPERFAMILY SSF50621 264 416 5.86E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 8.6E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 274 293 8.6E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 8.6E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 8.6E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 372 385 8.6E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 SUPERFAMILY SSF51419 27 286 3.93E-79 T 22-04-2016 IPR029066 PLP-binding barrel RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PANTHER PTHR11482:SF5 3 419 5.0E-166 T 22-04-2016 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 302 320 4.3E-28 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 4.3E-28 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 382 404 4.3E-28 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 4.3E-28 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 PANTHER PTHR11482 3 419 5.0E-166 T 22-04-2016 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 Gene3D G3DSA:2.40.37.10 267 417 4.3E-46 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 284 2.8E-69 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 RMET_RS16430 4c5857905a842b390e726ad1a34e3991 419 Gene3D G3DSA:3.20.20.10 37 266 5.1E-78 T 22-04-2016 IPR029066 PLP-binding barrel RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 SUPERFAMILY SSF53927 6 150 3.01E-46 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 Gene3D G3DSA:3.40.140.10 6 134 2.9E-33 T 22-04-2016 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 Gene3D G3DSA:3.40.430.10 135 368 1.2E-74 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 Pfam PF01872 RibD C-terminal domain 153 362 1.2E-46 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 PANTHER PTHR11079:SF10 1 226 1.8E-56 T 22-04-2016 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 364 5.3E-111 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 105 1.1E-18 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 PANTHER PTHR11079 1 226 1.8E-56 T 22-04-2016 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 PIRSF PIRSF006769 1 370 1.6E-120 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 366 1.8E-55 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 RMET_RS13495 bb4aea0161f453d0ea7c09b555b85473 373 SUPERFAMILY SSF53597 151 367 3.11E-58 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RMET_RS14650 31906d41d112aaff94af94d833afe20b 184 Gene3D G3DSA:1.20.1200.10 17 182 2.2E-63 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RMET_RS14650 31906d41d112aaff94af94d833afe20b 184 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 179 5.9E-60 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RMET_RS14650 31906d41d112aaff94af94d833afe20b 184 PANTHER PTHR12213 4 184 7.7E-67 T 22-04-2016 RMET_RS14650 31906d41d112aaff94af94d833afe20b 184 Pfam PF01923 Cobalamin adenosyltransferase 8 166 2.8E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RMET_RS14650 31906d41d112aaff94af94d833afe20b 184 PANTHER PTHR12213:SF0 4 184 7.7E-67 T 22-04-2016 RMET_RS14650 31906d41d112aaff94af94d833afe20b 184 SUPERFAMILY SSF89028 7 179 3.34E-59 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RMET_RS14650 31906d41d112aaff94af94d833afe20b 184 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 180 1.0E-85 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 234 2.9E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 Gene3D G3DSA:1.10.540.10 1 135 6.3E-31 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 SUPERFAMILY SSF47203 248 403 4.51E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 Gene3D G3DSA:1.20.140.10 240 406 2.2E-48 T 22-04-2016 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 250 398 4.7E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 SUPERFAMILY SSF56645 2 263 2.49E-65 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 PANTHER PTHR10909:SF282 1 420 2.5E-224 T 22-04-2016 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 133 2.3E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 PANTHER PTHR10909 1 420 2.5E-224 T 22-04-2016 RMET_RS04870 9bba59b8adf5105631181d4d38be1e02 420 Gene3D G3DSA:2.40.110.10 136 239 1.1E-40 T 22-04-2016 RMET_RS05785 6aab941d1cc0b056b2da76ea555e91b0 343 SUPERFAMILY SSF53850 159 256 3.6E-6 T 22-04-2016 RMET_RS05785 6aab941d1cc0b056b2da76ea555e91b0 343 SUPERFAMILY SSF53850 75 126 3.6E-6 T 22-04-2016 RMET_RS05785 6aab941d1cc0b056b2da76ea555e91b0 343 PANTHER PTHR33376 1 343 7.0E-67 T 22-04-2016 RMET_RS05785 6aab941d1cc0b056b2da76ea555e91b0 343 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 44 281 6.9E-60 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RMET_RS05785 6aab941d1cc0b056b2da76ea555e91b0 343 PIRSF PIRSF006470 1 341 2.6E-83 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RMET_RS05785 6aab941d1cc0b056b2da76ea555e91b0 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 325 2.4E-75 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RMET_RS02830 4783ca444db1557178223e28e05b78e4 507 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 46 501 1.1E-66 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS02830 4783ca444db1557178223e28e05b78e4 507 PIRSF PIRSF002457 14 507 1.1E-137 T 22-04-2016 IPR030676 Citrate carrier CitT-related RMET_RS02830 4783ca444db1557178223e28e05b78e4 507 Pfam PF00939 Sodium:sulfate symporter transmembrane region 29 507 1.8E-139 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS02830 4783ca444db1557178223e28e05b78e4 507 PANTHER PTHR10283 22 506 8.5E-66 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 SUPERFAMILY SSF55008 79 145 1.83E-20 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PANTHER PTHR24093:SF332 12 803 1.5E-274 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 15 75 2.1E-12 T 22-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 775 5.0E-87 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 46 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 ProSitePatterns PS01047 Heavy-metal-associated domain. 84 113 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00943 Copper-transporting ATPase signature 477 492 8.6E-10 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00943 Copper-transporting ATPase signature 417 431 8.6E-10 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00943 Copper-transporting ATPase signature 215 234 8.6E-10 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00943 Copper-transporting ATPase signature 284 302 8.6E-10 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00943 Copper-transporting ATPase signature 264 283 8.6E-10 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00943 Copper-transporting ATPase signature 671 688 8.6E-10 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PANTHER PTHR24093 12 803 1.5E-274 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 SUPERFAMILY SSF81665 264 298 3.53E-13 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 SUPERFAMILY SSF81665 395 488 3.53E-13 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 230 797 4.7E-183 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Pfam PF00403 Heavy-metal-associated domain 82 141 6.0E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Pfam PF00403 Heavy-metal-associated domain 15 74 1.1E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Gene3D G3DSA:2.70.150.10 229 395 2.2E-32 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 SUPERFAMILY SSF81653 297 394 6.54E-29 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Gene3D G3DSA:3.40.50.1000 465 508 1.9E-51 T 22-04-2016 IPR023214 HAD-like domain RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Gene3D G3DSA:3.40.50.1000 622 763 1.9E-51 T 22-04-2016 IPR023214 HAD-like domain RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Gene3D G3DSA:3.40.1110.10 509 621 3.1E-12 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Gene3D G3DSA:3.30.70.100 12 75 4.9E-22 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 496 502 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 SUPERFAMILY SSF56784 550 795 1.98E-55 T 22-04-2016 IPR023214 HAD-like domain RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 SUPERFAMILY SSF56784 492 512 1.98E-55 T 22-04-2016 IPR023214 HAD-like domain RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 SUPERFAMILY SSF55008 12 75 6.81E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Pfam PF00122 E1-E2 ATPase 265 485 1.4E-70 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 212 798 3.7E-173 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 714 2.4E-27 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 494 508 2.4E-27 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 651 2.4E-27 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 344 358 2.4E-27 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 2.4E-27 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Pfam PF00702 haloacid dehalogenase-like hydrolase 491 709 2.3E-41 T 22-04-2016 RMET_RS17705 35c1ffa162ccb88d50a83fee1bda83d2 813 Gene3D G3DSA:3.30.70.100 78 145 2.4E-24 T 22-04-2016 RMET_RS02735 14486f5b90009190d4b694ebf0e18a80 444 Gene3D G3DSA:1.20.1250.20 27 210 3.5E-28 T 22-04-2016 RMET_RS02735 14486f5b90009190d4b694ebf0e18a80 444 SUPERFAMILY SSF103473 25 434 8.63E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS02735 14486f5b90009190d4b694ebf0e18a80 444 PANTHER PTHR11662:SF277 26 441 4.8E-82 T 22-04-2016 RMET_RS02735 14486f5b90009190d4b694ebf0e18a80 444 Pfam PF07690 Major Facilitator Superfamily 43 328 3.1E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS02735 14486f5b90009190d4b694ebf0e18a80 444 Gene3D G3DSA:1.20.1250.20 240 435 4.0E-18 T 22-04-2016 RMET_RS02735 14486f5b90009190d4b694ebf0e18a80 444 PANTHER PTHR11662 26 441 4.8E-82 T 22-04-2016 RMET_RS07025 0963d5f7226d4360817aed911e2b8eed 89 PANTHER PTHR23310 1 85 1.6E-32 T 22-04-2016 RMET_RS07025 0963d5f7226d4360817aed911e2b8eed 89 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 3.9E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RMET_RS07025 0963d5f7226d4360817aed911e2b8eed 89 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 3.9E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RMET_RS07025 0963d5f7226d4360817aed911e2b8eed 89 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 3.9E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RMET_RS07025 0963d5f7226d4360817aed911e2b8eed 89 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 3.9E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RMET_RS07025 0963d5f7226d4360817aed911e2b8eed 89 Pfam PF00887 Acyl CoA binding protein 6 84 4.4E-25 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RMET_RS07025 0963d5f7226d4360817aed911e2b8eed 89 SUPERFAMILY SSF47027 3 86 3.79E-27 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RMET_RS07025 0963d5f7226d4360817aed911e2b8eed 89 Gene3D G3DSA:1.20.80.10 1 86 3.4E-30 T 22-04-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle RMET_RS10585 691529c7ce4d69ef160f032057ec295d 278 SUPERFAMILY SSF53098 3 232 6.4E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10585 691529c7ce4d69ef160f032057ec295d 278 Gene3D G3DSA:3.30.420.10 4 224 2.8E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10585 691529c7ce4d69ef160f032057ec295d 278 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 264 5.5E-89 T 22-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 Pfam PF00271 Helicase conserved C-terminal domain 242 347 7.1E-27 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 161 169 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 Pfam PF00270 DEAD/DEAH box helicase 25 202 3.7E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 511 51.573 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 PANTHER PTHR24031 1 477 2.4E-190 T 22-04-2016 RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 PANTHER PTHR24031:SF261 1 477 2.4E-190 T 22-04-2016 RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 Gene3D G3DSA:3.40.50.300 1 219 2.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 SMART SM00490 266 347 3.3E-32 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 SMART SM00487 20 230 3.0E-61 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 SUPERFAMILY SSF52540 82 368 4.2E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02310 0ed38517bc07a924bc6b075fbc0ec5b0 540 Gene3D G3DSA:3.40.50.300 220 378 3.8E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 PANTHER PTHR32282 433 741 6.0E-248 T 22-04-2016 RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 PANTHER PTHR32282 1 326 6.0E-248 T 22-04-2016 RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 Pfam PF00912 Transglycosylase 73 245 2.0E-64 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 Gene3D G3DSA:3.40.710.10 434 752 6.8E-135 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 Gene3D G3DSA:3.40.710.10 248 329 6.8E-135 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 SUPERFAMILY SSF53955 59 268 1.35E-77 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 Pfam PF17092 Penicillin-binding protein OB-like domain 332 437 1.3E-21 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 703 1.9E-41 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 SUPERFAMILY SSF56601 227 249 5.81E-124 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 SUPERFAMILY SSF56601 278 329 5.81E-124 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 SUPERFAMILY SSF56601 434 748 5.81E-124 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 PANTHER PTHR32282:SF5 433 741 6.0E-248 T 22-04-2016 RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 PANTHER PTHR32282:SF5 1 326 6.0E-248 T 22-04-2016 RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 Gene3D G3DSA:2.40.50.140 363 433 1.8E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 82 723 1.1E-192 T 22-04-2016 RMET_RS16415 c87e1976234d5ac3783d33960e81eed7 792 Gene3D G3DSA:1.10.3810.10 73 247 1.2E-75 T 22-04-2016 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 Pfam PF01220 Dehydroquinase class II 1 137 1.9E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 SUPERFAMILY SSF52304 1 140 1.7E-64 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 1 138 9.0E-63 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 PIRSF PIRSF001399 1 144 1.5E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 4 21 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 PANTHER PTHR21272 1 147 1.1E-94 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 Gene3D G3DSA:3.40.50.9100 1 140 2.1E-69 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 75.916 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS15350 118509f0b9f229d36c387ff142f723e0 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 1 141 9.0E-79 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PANTHER PTHR30413 1 285 8.6E-93 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 Pfam PF01061 ABC-2 type transporter 39 249 1.5E-22 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 34 283 7.4E-96 T 22-04-2016 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PIRSF PIRSF006648 12 284 2.2E-25 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PANTHER PTHR30413:SF7 1 285 8.6E-93 T 22-04-2016 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 88 110 2.8E-53 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 79 2.8E-53 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 227 246 2.8E-53 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 207 226 2.8E-53 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 133 158 2.8E-53 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS12335 ab2b344fa30f759944bddbb20085cd6a 285 PRINTS PR00164 ABC-2 type transport system membrane protein signature 170 194 2.8E-53 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 SUPERFAMILY SSF52540 475 649 1.52E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Gene3D G3DSA:3.40.50.300 480 638 4.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Gene3D G3DSA:3.40.50.10050 780 858 5.5E-27 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 SUPERFAMILY SSF50447 881 977 7.66E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Pfam PF00009 Elongation factor Tu GTP binding domain 484 639 1.7E-34 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Gene3D G3DSA:2.40.30.10 881 977 3.5E-39 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 1.1E-12 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Pfam PF11987 Translation-initiation factor 2 765 869 8.2E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 SUPERFAMILY SSF52156 757 886 1.44E-38 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 396 979 4.2E-265 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 SUPERFAMILY SSF50447 652 734 4.57E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Gene3D G3DSA:2.40.30.10 651 744 1.7E-23 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 977 17.613 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 401 452 2.2E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 9.4E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 PANTHER PTHR23115 447 462 5.7E-205 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 PANTHER PTHR23115 480 807 5.7E-205 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 PANTHER PTHR23115 832 977 5.7E-205 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 PANTHER PTHR23115:SF184 447 462 5.7E-205 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 PANTHER PTHR23115:SF184 480 807 5.7E-205 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 PANTHER PTHR23115:SF184 832 977 5.7E-205 T 22-04-2016 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 ProSitePatterns PS01176 Initiation factor 2 signature. 930 952 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 482 638 3.0E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 SUPERFAMILY SSF46955 3 51 6.59E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS10165 56ce42dda5a3356ea1417568eff82ce6 979 Gene3D G3DSA:3.30.56.50 3 51 1.4E-17 T 22-04-2016 RMET_RS03555 e71f6398eedfebed986805aa8cac65ce 156 Pfam PF08909 Domain of unknown function (DUF1854) 26 155 4.6E-51 T 22-04-2016 IPR015005 Domain of unknown function DUF1854 RMET_RS13725 301d6f24d7051e6a4dfb2b394309d8a3 354 Gene3D G3DSA:3.40.50.720 3 193 6.5E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13725 301d6f24d7051e6a4dfb2b394309d8a3 354 PANTHER PTHR10366:SF41 3 352 3.1E-171 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RMET_RS13725 301d6f24d7051e6a4dfb2b394309d8a3 354 Gene3D G3DSA:3.90.25.10 194 349 5.7E-57 T 22-04-2016 RMET_RS13725 301d6f24d7051e6a4dfb2b394309d8a3 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 3.0E-100 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13725 301d6f24d7051e6a4dfb2b394309d8a3 354 PANTHER PTHR10366 3 352 3.1E-171 T 22-04-2016 RMET_RS13725 301d6f24d7051e6a4dfb2b394309d8a3 354 SUPERFAMILY SSF51735 3 336 1.43E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13725 301d6f24d7051e6a4dfb2b394309d8a3 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 338 4.2E-155 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RMET_RS19025 b094ea357855189fe9fab295893e67c4 273 Pfam PF01380 SIS domain 189 272 7.7E-15 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RMET_RS19025 b094ea357855189fe9fab295893e67c4 273 PANTHER PTHR10937 2 273 7.4E-106 T 22-04-2016 RMET_RS19025 b094ea357855189fe9fab295893e67c4 273 Pfam PF13537 Glutamine amidotransferase domain 2 91 5.3E-7 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RMET_RS19025 b094ea357855189fe9fab295893e67c4 273 Gene3D G3DSA:3.40.50.10490 143 273 5.7E-42 T 22-04-2016 RMET_RS19025 b094ea357855189fe9fab295893e67c4 273 Gene3D G3DSA:3.60.20.10 2 133 7.4E-31 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS19025 b094ea357855189fe9fab295893e67c4 273 SUPERFAMILY SSF56235 2 134 3.69E-28 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS19025 b094ea357855189fe9fab295893e67c4 273 SUPERFAMILY SSF53697 127 273 2.88E-35 T 22-04-2016 RMET_RS19025 b094ea357855189fe9fab295893e67c4 273 PANTHER PTHR10937:SF0 2 273 7.4E-106 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 SUPERFAMILY SSF52172 1 162 1.35E-36 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 Pfam PF00072 Response regulator receiver domain 3 112 3.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 SUPERFAMILY SSF46894 127 219 2.21E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 PANTHER PTHR26402 1 224 6.2E-75 T 22-04-2016 RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 SMART SM00448 1 112 2.0E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 Gene3D G3DSA:3.40.50.2300 1 121 6.0E-36 T 22-04-2016 RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 5.8E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 Gene3D G3DSA:1.10.10.10 123 221 4.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 SMART SM00862 145 218 9.2E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS18010 9fed409b534252ac4cf7f76e15dfa42d 224 PANTHER PTHR26402:SF316 1 224 6.2E-75 T 22-04-2016 RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 PANTHER PTHR24567 1 224 5.3E-63 T 22-04-2016 RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 SMART SM00419 171 219 7.2E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 PANTHER PTHR24567:SF28 1 224 5.3E-63 T 22-04-2016 RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 SUPERFAMILY SSF46785 149 226 3.04E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 Pfam PF00027 Cyclic nucleotide-binding domain 34 116 4.1E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 Gene3D G3DSA:2.60.120.10 11 145 6.1E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 SUPERFAMILY SSF51206 7 145 6.28E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 Pfam PF13545 Crp-like helix-turn-helix domain 152 224 8.5E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 208 8.2E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 177 193 8.2E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 Gene3D G3DSA:1.10.10.10 149 227 6.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08480 543009e98591534a18ea9b80685b0b82 244 SMART SM00100 14 132 1.6E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RMET_RS11150 6f98e7753047325aad616be55b77c4cc 262 PANTHER PTHR24220 17 248 2.1E-90 T 22-04-2016 RMET_RS11150 6f98e7753047325aad616be55b77c4cc 262 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS11150 6f98e7753047325aad616be55b77c4cc 262 Pfam PF00005 ABC transporter 35 173 8.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS11150 6f98e7753047325aad616be55b77c4cc 262 PANTHER PTHR24220:SF589 17 248 2.1E-90 T 22-04-2016 RMET_RS11150 6f98e7753047325aad616be55b77c4cc 262 Gene3D G3DSA:3.40.50.300 8 221 6.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11150 6f98e7753047325aad616be55b77c4cc 262 SMART SM00382 44 223 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS11150 6f98e7753047325aad616be55b77c4cc 262 SUPERFAMILY SSF52540 16 242 4.13E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 Pfam PF00708 Acylphosphatase 13 99 4.0E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 Gene3D G3DSA:3.90.870.10 213 399 1.7E-37 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 Pfam PF07503 HypF finger 170 201 1.3E-12 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 Pfam PF07503 HypF finger 119 151 8.1E-17 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 PIRSF PIRSF006256 11 783 4.3E-295 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 SUPERFAMILY SSF54975 12 100 1.79E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 ProSitePatterns PS00150 Acylphosphatase signature 1. 19 29 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 PANTHER PTHR10029 14 783 0.0 T 22-04-2016 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 SUPERFAMILY SSF55821 187 423 1.77E-37 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 PANTHER PTHR10029:SF4 14 783 0.0 T 22-04-2016 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 Pfam PF01300 Telomere recombination 223 412 1.3E-45 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 17 774 3.0E-226 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 RMET_RS07735 2bf82bbdd229d7d946039bdefd168cea 785 Gene3D G3DSA:3.30.70.100 12 99 5.0E-29 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Pfam PF00873 AcrB/AcrD/AcrF family 4 249 3.8E-71 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Pfam PF00873 AcrB/AcrD/AcrF family 317 1073 1.8E-254 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82693 620 715 4.71E-17 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82693 853 897 2.09E-6 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82714 768 850 2.09E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82866 876 1074 2.88E-43 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Gene3D G3DSA:1.10.3850.10 339 556 2.3E-57 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Gene3D G3DSA:1.10.3850.10 859 1076 6.2E-55 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Gene3D G3DSA:3.30.70.1430 40 142 4.0E-28 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82693 136 182 3.3E-20 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82693 332 388 3.3E-20 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 PRINTS PR00702 Acriflavin resistance protein family signature 670 684 4.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 PRINTS PR00702 Acriflavin resistance protein family signature 607 624 4.0E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 PANTHER PTHR32063 1 248 0.0 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 PANTHER PTHR32063 311 1091 0.0 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 PANTHER PTHR32063:SF34 1 248 0.0 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 PANTHER PTHR32063:SF34 311 1091 0.0 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Gene3D G3DSA:3.30.2090.10 183 250 2.7E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Gene3D G3DSA:3.30.2090.10 769 850 1.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Gene3D G3DSA:3.30.2090.10 315 327 2.7E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82714 183 250 8.5E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82693 40 133 3.49E-22 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 Gene3D G3DSA:3.30.70.1430 623 710 6.4E-13 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82866 354 555 3.14E-48 T 22-04-2016 RMET_RS02590 2c3adbd30aa484e00f52a793c275b947 1100 SUPERFAMILY SSF82693 722 766 2.09E-6 T 22-04-2016 RMET_RS21670 e3f5a8f7be0f4fcf4ff316135cc900ab 382 Gene3D G3DSA:3.40.1190.10 106 344 8.9E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS21670 e3f5a8f7be0f4fcf4ff316135cc900ab 382 PANTHER PTHR23135 10 372 1.3E-60 T 22-04-2016 RMET_RS21670 e3f5a8f7be0f4fcf4ff316135cc900ab 382 Pfam PF08245 Mur ligase middle domain 112 326 5.8E-13 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS21670 e3f5a8f7be0f4fcf4ff316135cc900ab 382 SUPERFAMILY SSF53244 351 382 2.29E-5 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS21670 e3f5a8f7be0f4fcf4ff316135cc900ab 382 SUPERFAMILY SSF53623 106 344 7.78E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS21670 e3f5a8f7be0f4fcf4ff316135cc900ab 382 PANTHER PTHR23135:SF18 10 372 1.3E-60 T 22-04-2016 RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 91 3.5E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 SUPERFAMILY SSF54292 4 108 5.54E-33 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 PANTHER PTHR23426 7 112 4.9E-39 T 22-04-2016 RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 Gene3D G3DSA:3.10.20.30 4 108 1.9E-34 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.3E-59 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 PRINTS PR00355 Adrenodoxin signature 83 91 2.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 PRINTS PR00355 Adrenodoxin signature 60 74 2.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RMET_RS05180 34290dec5a174b81d216bb4fa830d63c 112 PRINTS PR00355 Adrenodoxin signature 42 52 2.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RMET_RS10925 c5ac965495cd1cddf4ec0f95dc13213a 236 PANTHER PTHR37323:SF1 1 233 1.0E-72 T 22-04-2016 RMET_RS10925 c5ac965495cd1cddf4ec0f95dc13213a 236 Pfam PF13444 Acetyltransferase (GNAT) domain 16 116 2.0E-35 T 22-04-2016 RMET_RS10925 c5ac965495cd1cddf4ec0f95dc13213a 236 SUPERFAMILY SSF55729 2 206 6.74E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS10925 c5ac965495cd1cddf4ec0f95dc13213a 236 Gene3D G3DSA:3.40.630.30 3 201 2.8E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS10925 c5ac965495cd1cddf4ec0f95dc13213a 236 PANTHER PTHR37323 1 233 1.0E-72 T 22-04-2016 RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 4.0E-21 T 22-04-2016 RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 Gene3D G3DSA:1.10.10.10 7 58 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 SUPERFAMILY SSF46785 5 65 4.05E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 PANTHER PTHR30154 1 160 9.5E-55 T 22-04-2016 RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 SUPERFAMILY SSF54909 66 160 7.24E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 Pfam PF01037 Lrp/AsnC ligand binding domain 72 150 3.3E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.0E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.0E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.0E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 PANTHER PTHR30154:SF23 1 160 9.5E-55 T 22-04-2016 RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 SMART SM00344 6 120 7.0E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RMET_RS16975 e1965f89458389ecf4aa0201aef89034 164 Gene3D G3DSA:3.30.70.920 59 148 6.8E-33 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS15750 178096d384932f397093adc89e710b98 333 PIRSF PIRSF017082 1 332 5.5E-78 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS15750 178096d384932f397093adc89e710b98 333 PANTHER PTHR30349 5 319 1.4E-105 T 22-04-2016 RMET_RS15750 178096d384932f397093adc89e710b98 333 PANTHER PTHR30349:SF16 5 319 1.4E-105 T 22-04-2016 RMET_RS15750 178096d384932f397093adc89e710b98 333 SUPERFAMILY SSF53850 118 289 5.19E-7 T 22-04-2016 RMET_RS15750 178096d384932f397093adc89e710b98 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 328 6.6E-87 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04560 138b8998567ea8fdfa17bd037249a28e 345 PANTHER PTHR34990 73 323 4.6E-119 T 22-04-2016 RMET_RS04560 138b8998567ea8fdfa17bd037249a28e 345 Gene3D G3DSA:3.60.21.10 270 321 1.2E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS04560 138b8998567ea8fdfa17bd037249a28e 345 Gene3D G3DSA:3.60.21.10 87 228 1.2E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS04560 138b8998567ea8fdfa17bd037249a28e 345 PANTHER PTHR34990:SF2 73 323 4.6E-119 T 22-04-2016 RMET_RS04560 138b8998567ea8fdfa17bd037249a28e 345 Pfam PF00149 Calcineurin-like phosphoesterase 91 286 8.5E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RMET_RS04560 138b8998567ea8fdfa17bd037249a28e 345 SUPERFAMILY SSF56300 87 204 1.19E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS04560 138b8998567ea8fdfa17bd037249a28e 345 SUPERFAMILY SSF56300 263 325 1.19E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS29090 3a0029c26bf5adc43147a8547601a8d3 139 Pfam PF01266 FAD dependent oxidoreductase 69 135 1.7E-16 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RMET_RS29090 3a0029c26bf5adc43147a8547601a8d3 139 PANTHER PTHR11985 50 139 4.3E-41 T 22-04-2016 RMET_RS29090 3a0029c26bf5adc43147a8547601a8d3 139 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 81 91 1.1E-13 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS29090 3a0029c26bf5adc43147a8547601a8d3 139 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 97 109 1.1E-13 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS29090 3a0029c26bf5adc43147a8547601a8d3 139 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 68 80 1.1E-13 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS29090 3a0029c26bf5adc43147a8547601a8d3 139 SUPERFAMILY SSF51905 52 120 4.46E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS29090 3a0029c26bf5adc43147a8547601a8d3 139 Gene3D G3DSA:3.50.50.60 67 124 6.3E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 PANTHER PTHR11819 361 439 6.0E-158 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 PANTHER PTHR11819 469 678 6.0E-158 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 PANTHER PTHR11819 41 273 6.0E-158 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 45 681 1.0E-212 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 Pfam PF00474 Sodium:solute symporter family 70 236 2.4E-31 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 Pfam PF00474 Sodium:solute symporter family 498 613 5.7E-19 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 PANTHER PTHR11819:SF159 361 439 6.0E-158 T 22-04-2016 RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 PANTHER PTHR11819:SF159 469 678 6.0E-158 T 22-04-2016 RMET_RS11395 3f57a9a959377ba18590400a59aaeb5c 683 PANTHER PTHR11819:SF159 41 273 6.0E-158 T 22-04-2016 RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 329 3.3E-26 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 SUPERFAMILY SSF52467 163 361 5.54E-35 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 Gene3D G3DSA:3.40.50.970 11 183 8.3E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 178 7.0E-53 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 PANTHER PTHR18968 11 545 1.7E-251 T 22-04-2016 RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 Gene3D G3DSA:3.40.50.1220 191 342 2.1E-31 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 SUPERFAMILY SSF52518 372 553 1.27E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 PANTHER PTHR18968:SF120 11 545 1.7E-251 T 22-04-2016 RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 540 3.1E-44 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 SUPERFAMILY SSF52518 6 187 9.26E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS08230 5006d33f7c0137c7612cc9cbc4d46125 559 Gene3D G3DSA:3.40.50.970 363 553 9.8E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS00280 124199fbf192ad77a98f1f2fccd4b0f1 170 PANTHER PTHR37484 5 164 7.7E-23 T 22-04-2016 RMET_RS00280 124199fbf192ad77a98f1f2fccd4b0f1 170 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 155 3.6E-29 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RMET_RS00280 124199fbf192ad77a98f1f2fccd4b0f1 170 Pfam PF04093 rod shape-determining protein MreD 14 154 4.1E-15 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RMET_RS00280 124199fbf192ad77a98f1f2fccd4b0f1 170 PIRSF PIRSF018472 4 164 3.0E-44 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PANTHER PTHR24322 155 187 5.9E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PANTHER PTHR24322 10 139 5.9E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 6 247 2.1E-107 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 SUPERFAMILY SSF51735 6 247 1.3E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 Gene3D G3DSA:3.40.50.720 2 247 7.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.5E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.5E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.5E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 2.1E-58 T 22-04-2016 RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 1.9E-5 T 22-04-2016 RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PANTHER PTHR24322:SF328 155 187 5.9E-53 T 22-04-2016 RMET_RS06725 f57dbfd63e9992fe7e511bc765f55861 248 PANTHER PTHR24322:SF328 10 139 5.9E-53 T 22-04-2016 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 SMART SM01193 4 134 4.0E-84 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 422 5.4E-111 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 PRINTS PR00148 Enolase signature 161 174 1.1E-40 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 PRINTS PR00148 Enolase signature 363 380 1.1E-40 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 PRINTS PR00148 Enolase signature 37 51 1.1E-40 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 PRINTS PR00148 Enolase signature 107 123 1.1E-40 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 PRINTS PR00148 Enolase signature 334 348 1.1E-40 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 PRINTS PR00148 Enolase signature 311 322 1.1E-40 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 5 420 1.8E-191 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 PIRSF PIRSF001400 1 424 2.8E-176 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 Pfam PF03952 Enolase, N-terminal domain 5 134 5.5E-54 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 Hamap MF_00318 Enolase [eno]. 2 411 42.296 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 Gene3D G3DSA:3.20.20.120 128 420 6.3E-117 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 Gene3D G3DSA:3.30.390.10 4 126 2.6E-50 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 SMART SM01192 139 425 1.3E-192 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 SUPERFAMILY SSF51604 140 419 2.83E-113 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 PANTHER PTHR11902 1 420 6.8E-221 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05925 2d90b960adff893c10532d74029dfcb9 425 SUPERFAMILY SSF54826 4 136 2.77E-51 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856 1198 1365 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856 1053 1147 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856 5 233 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856 749 936 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856 344 731 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:2.40.270.10 1079 1268 1.9E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:2.40.270.10 799 826 1.9E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Pfam PF04565 RNA polymerase Rpb2, domain 3 517 584 9.2E-32 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1368 12.247 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1364 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856:SF20 1198 1365 0.0 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856:SF20 1053 1147 0.0 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856:SF20 5 233 0.0 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856:SF20 749 936 0.0 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 PANTHER PTHR20856:SF20 344 731 0.0 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:3.90.1110.10 350 448 2.9E-63 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:3.90.1110.10 156 233 2.9E-63 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Pfam PF04560 RNA polymerase Rpb2, domain 7 1292 1365 2.1E-26 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 SUPERFAMILY SSF64484 347 945 0.0 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 SUPERFAMILY SSF64484 1058 1365 0.0 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 SUPERFAMILY SSF64484 12 229 0.0 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 154 226 8.7E-6 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 351 458 2.2E-15 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Pfam PF00562 RNA polymerase Rpb2, domain 6 724 1290 4.7E-158 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:2.40.50.150 1064 1078 3.9E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:2.40.50.150 834 943 3.9E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Pfam PF04563 RNA polymerase beta subunit 27 504 1.3E-35 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:3.90.1100.10 449 595 2.8E-146 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:3.90.1100.10 665 719 2.8E-146 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:3.90.1100.10 21 154 2.8E-146 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:2.30.150.10 596 662 9.0E-24 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Gene3D G3DSA:2.40.50.100 721 798 3.1E-28 T 22-04-2016 RMET_RS16720 ab715ecccf849d2b30b6e44cce8262fd 1368 Pfam PF10385 RNA polymerase beta subunit external 1 domain 595 662 8.1E-22 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 SUPERFAMILY SSF50692 704 784 1.02E-5 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 628 7.9E-214 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 PANTHER PTHR11615 546 664 1.6E-166 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 PANTHER PTHR11615 481 514 1.6E-166 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 PANTHER PTHR11615 3 421 1.6E-166 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Gene3D G3DSA:3.10.20.30 2 60 1.6E-7 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 SUPERFAMILY SSF53706 214 652 1.81E-93 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 7.4E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Pfam PF01568 Molydopterin dinucleotide binding domain 699 784 2.8E-5 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Gene3D G3DSA:3.40.50.740 520 650 1.2E-51 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Gene3D G3DSA:3.40.50.740 273 412 1.2E-51 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 5.2E-19 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 PANTHER PTHR11615:SF115 546 664 1.6E-166 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 PANTHER PTHR11615:SF115 481 514 1.6E-166 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 PANTHER PTHR11615:SF115 3 421 1.6E-166 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 SUPERFAMILY SSF54292 1 74 7.83E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Pfam PF00384 Molybdopterin oxidoreductase 273 407 1.8E-17 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Pfam PF00384 Molybdopterin oxidoreductase 535 628 3.2E-16 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 Gene3D G3DSA:2.40.40.20 705 758 2.0E-4 T 22-04-2016 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 SMART SM00929 83 123 8.9E-21 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RMET_RS04695 682d5d55afa0a5c38bea4cec0769e877 790 SUPERFAMILY SSF54862 75 211 4.02E-36 T 22-04-2016 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 SUPERFAMILY SSF46458 2 143 1.55E-37 T 22-04-2016 IPR009050 Globin-like RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PANTHER PTHR22924:SF49 1 401 1.4E-106 T 22-04-2016 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 Gene3D G3DSA:2.40.30.10 152 257 1.6E-28 T 22-04-2016 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00410 Phenol hydroxylase reductase family signature 267 286 9.2E-7 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00410 Phenol hydroxylase reductase family signature 292 301 9.2E-7 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00410 Phenol hydroxylase reductase family signature 182 194 9.2E-7 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00410 Phenol hydroxylase reductase family signature 365 373 9.2E-7 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 Pfam PF00175 Oxidoreductase NAD-binding domain 268 378 1.8E-10 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 Pfam PF00970 Oxidoreductase FAD-binding domain 155 256 8.5E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 182 192 8.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 365 373 8.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 209 8.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 231 240 8.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 267 286 8.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 SUPERFAMILY SSF52343 261 399 1.7E-32 T 22-04-2016 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 PANTHER PTHR22924 1 401 1.4E-106 T 22-04-2016 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 Gene3D G3DSA:3.40.50.80 261 400 1.3E-29 T 22-04-2016 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 SUPERFAMILY SSF63380 152 256 2.72E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 Gene3D G3DSA:1.10.490.10 3 142 3.6E-48 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RMET_RS16990 d5ce8487fbedc50da714d2dec848de5b 406 Pfam PF00042 Globin 10 102 8.3E-8 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 RMET_RS17985 8a185b744bb04ea1b4ce34dd5670dc93 218 Pfam PF03473 MOSC domain 75 194 9.2E-19 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RMET_RS17985 8a185b744bb04ea1b4ce34dd5670dc93 218 SUPERFAMILY SSF50800 18 210 1.88E-47 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RMET_RS17985 8a185b744bb04ea1b4ce34dd5670dc93 218 PANTHER PTHR30212:SF2 16 197 3.7E-33 T 22-04-2016 RMET_RS17985 8a185b744bb04ea1b4ce34dd5670dc93 218 Gene3D G3DSA:2.40.33.20 16 210 2.6E-54 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RMET_RS17985 8a185b744bb04ea1b4ce34dd5670dc93 218 PANTHER PTHR30212 16 197 3.7E-33 T 22-04-2016 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 34 55 5.5E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 60 77 5.5E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 108 126 5.5E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 83 106 5.5E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 200 223 5.5E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 163 182 5.5E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PANTHER PTHR30070:SF1 7 227 8.3E-58 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 13 223 2.2E-73 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PIRSF PIRSF002764 3 227 4.2E-80 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 PANTHER PTHR30070 7 227 8.3E-58 T 22-04-2016 RMET_RS11965 22fa5194c4c8ef002e8ff1b7ff765029 228 Pfam PF03379 CcmB protein 12 224 1.0E-74 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS17285 a5be12908a6d2a09903d8e671ed66eb4 152 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 4.1E-15 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS17285 a5be12908a6d2a09903d8e671ed66eb4 152 SUPERFAMILY SSF69118 8 144 1.87E-36 T 22-04-2016 IPR029032 AhpD-like RMET_RS17285 a5be12908a6d2a09903d8e671ed66eb4 152 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 28 76 5.6E-12 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS17285 a5be12908a6d2a09903d8e671ed66eb4 152 Gene3D G3DSA:1.20.1290.10 8 145 2.3E-42 T 22-04-2016 IPR029032 AhpD-like RMET_RS04615 990e5e8be46b11264015195ed9e3ef51 166 SUPERFAMILY SSF54106 114 164 1.09E-8 T 22-04-2016 IPR018392 LysM domain RMET_RS04615 990e5e8be46b11264015195ed9e3ef51 166 Pfam PF04972 BON domain 46 107 7.4E-9 T 22-04-2016 IPR007055 BON domain RMET_RS04615 990e5e8be46b11264015195ed9e3ef51 166 Gene3D G3DSA:3.10.350.10 114 165 3.1E-12 T 22-04-2016 IPR018392 LysM domain RMET_RS04615 990e5e8be46b11264015195ed9e3ef51 166 Pfam PF01476 LysM domain 116 164 2.9E-13 T 22-04-2016 IPR018392 LysM domain RMET_RS04615 990e5e8be46b11264015195ed9e3ef51 166 PANTHER PTHR34700 93 166 2.0E-23 T 22-04-2016 RMET_RS04615 990e5e8be46b11264015195ed9e3ef51 166 SMART SM00257 115 164 1.8E-13 T 22-04-2016 IPR018392 LysM domain RMET_RS07695 b8d31899463972debdd947e10857dede 139 PANTHER PTHR10160:SF19 1 121 6.2E-42 T 22-04-2016 RMET_RS07695 b8d31899463972debdd947e10857dede 139 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 2 121 9.9E-38 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RMET_RS07695 b8d31899463972debdd947e10857dede 139 SUPERFAMILY SSF51735 2 71 1.69E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07695 b8d31899463972debdd947e10857dede 139 SMART SM01002 1 68 1.3E-5 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RMET_RS07695 b8d31899463972debdd947e10857dede 139 Gene3D G3DSA:3.40.50.720 2 76 2.8E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07695 b8d31899463972debdd947e10857dede 139 PANTHER PTHR10160 1 121 6.2E-42 T 22-04-2016 RMET_RS05035 21788bf6e86b88dfe16c93098cd1640d 371 Gene3D G3DSA:3.40.50.1400 225 345 5.7E-30 T 22-04-2016 RMET_RS05035 21788bf6e86b88dfe16c93098cd1640d 371 Hamap MF_00323 Ferrochelatase [hemH]. 15 344 37.645 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RMET_RS05035 21788bf6e86b88dfe16c93098cd1640d 371 TIGRFAM TIGR00109 hemH: ferrochelatase 14 344 3.9E-88 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RMET_RS05035 21788bf6e86b88dfe16c93098cd1640d 371 ProSitePatterns PS00534 Ferrochelatase signature. 213 231 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RMET_RS05035 21788bf6e86b88dfe16c93098cd1640d 371 PANTHER PTHR11108 15 345 3.5E-112 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RMET_RS05035 21788bf6e86b88dfe16c93098cd1640d 371 Gene3D G3DSA:3.40.50.1400 15 224 7.0E-67 T 22-04-2016 RMET_RS05035 21788bf6e86b88dfe16c93098cd1640d 371 Pfam PF00762 Ferrochelatase 16 343 3.0E-110 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RMET_RS05035 21788bf6e86b88dfe16c93098cd1640d 371 SUPERFAMILY SSF53800 15 350 2.22E-102 T 22-04-2016 RMET_RS18450 77ad135ce7eb38950ec7fddbbc275627 232 Pfam PF04055 Radical SAM superfamily 53 213 3.0E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS18450 77ad135ce7eb38950ec7fddbbc275627 232 TIGRFAM TIGR00510 lipA: lipoyl synthase 2 231 2.1E-103 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS18450 77ad135ce7eb38950ec7fddbbc275627 232 PANTHER PTHR10949 1 231 3.9E-131 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS18450 77ad135ce7eb38950ec7fddbbc275627 232 SUPERFAMILY SSF102114 14 231 2.35E-56 T 22-04-2016 RMET_RS18450 77ad135ce7eb38950ec7fddbbc275627 232 Gene3D G3DSA:3.20.20.70 15 231 2.1E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS18450 77ad135ce7eb38950ec7fddbbc275627 232 SMART SM00729 46 231 4.3E-6 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS18450 77ad135ce7eb38950ec7fddbbc275627 232 Hamap MF_00206 Lipoyl synthase [lipA]. 1 232 132.738 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS11810 9efdafdd78bc3481eb2578d4f6b533f3 963 SUPERFAMILY SSF52540 487 614 7.2E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11810 9efdafdd78bc3481eb2578d4f6b533f3 963 SUPERFAMILY SSF52540 650 882 7.2E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11810 9efdafdd78bc3481eb2578d4f6b533f3 963 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 65 343 4.0E-71 T 22-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase RMET_RS11810 9efdafdd78bc3481eb2578d4f6b533f3 963 Gene3D G3DSA:3.40.50.300 532 603 1.7E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11810 9efdafdd78bc3481eb2578d4f6b533f3 963 Gene3D G3DSA:3.40.50.300 744 868 1.7E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11810 9efdafdd78bc3481eb2578d4f6b533f3 963 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 54 954 0.0 T 22-04-2016 IPR022303 Conjugative transfer ATPase RMET_RS00940 4ed28c3435c703a222c0758471fbc106 268 PIRSF PIRSF028200 1 261 1.0E-57 T 22-04-2016 IPR016875 Uncharacterised conserved protein UCP028200 RMET_RS08905 e7e6fda679bd5eae2031177817bde61e 121 SUPERFAMILY SSF54593 3 117 9.4E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS08905 e7e6fda679bd5eae2031177817bde61e 121 Gene3D G3DSA:3.10.180.10 3 117 5.6E-38 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS17080 4b0311f4595f2824d9d11d2ffccea744 370 Pfam PF07690 Major Facilitator Superfamily 3 306 1.1E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS17080 4b0311f4595f2824d9d11d2ffccea744 370 Gene3D G3DSA:1.20.1250.20 189 360 1.3E-7 T 22-04-2016 RMET_RS17080 4b0311f4595f2824d9d11d2ffccea744 370 SUPERFAMILY SSF103473 2 361 7.32E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS17080 4b0311f4595f2824d9d11d2ffccea744 370 PANTHER PTHR23514:SF13 1 366 1.5E-91 T 22-04-2016 RMET_RS17080 4b0311f4595f2824d9d11d2ffccea744 370 Gene3D G3DSA:1.20.1250.20 2 168 5.3E-13 T 22-04-2016 RMET_RS17080 4b0311f4595f2824d9d11d2ffccea744 370 PANTHER PTHR23514 1 366 1.5E-91 T 22-04-2016 RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 188 0.0021 T 22-04-2016 RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.8E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.8E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.8E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.8E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.8E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.8E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 Gene3D G3DSA:3.40.50.720 4 247 7.2E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PANTHER PTHR24322 13 142 1.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PANTHER PTHR24322 158 188 1.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 245 1.3E-42 T 22-04-2016 RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 SUPERFAMILY SSF51735 4 247 5.6E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PANTHER PTHR24322:SF513 13 142 1.8E-30 T 22-04-2016 RMET_RS09575 60b67004f5eca0995c19c59c4fb75b5c 249 PANTHER PTHR24322:SF513 158 188 1.8E-30 T 22-04-2016 RMET_RS17150 9e35dc1734b1ea0638d502bc968f621b 412 Pfam PF02515 CoA-transferase family III 4 370 9.3E-126 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS17150 9e35dc1734b1ea0638d502bc968f621b 412 Gene3D G3DSA:3.40.50.10540 3 214 5.3E-113 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS17150 9e35dc1734b1ea0638d502bc968f621b 412 Gene3D G3DSA:3.40.50.10540 303 395 5.3E-113 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS17150 9e35dc1734b1ea0638d502bc968f621b 412 SUPERFAMILY SSF89796 3 393 4.06E-137 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS17150 9e35dc1734b1ea0638d502bc968f621b 412 PANTHER PTHR24023 70 380 4.8E-36 T 22-04-2016 RMET_RS17150 9e35dc1734b1ea0638d502bc968f621b 412 Gene3D G3DSA:3.30.1540.10 220 302 2.7E-31 T 22-04-2016 RMET_RS17150 9e35dc1734b1ea0638d502bc968f621b 412 PANTHER PTHR24023:SF593 70 380 4.8E-36 T 22-04-2016 RMET_RS00515 860752af7c71f2b3427b496eddaed156 280 SUPERFAMILY SSF53807 18 275 5.89E-33 T 22-04-2016 RMET_RS00515 860752af7c71f2b3427b496eddaed156 280 Gene3D G3DSA:3.40.50.1980 18 135 6.8E-20 T 22-04-2016 RMET_RS00515 860752af7c71f2b3427b496eddaed156 280 Pfam PF01497 Periplasmic binding protein 19 179 8.9E-13 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RMET_RS00515 860752af7c71f2b3427b496eddaed156 280 PANTHER PTHR30535 18 178 4.6E-23 T 22-04-2016 RMET_RS00515 860752af7c71f2b3427b496eddaed156 280 Gene3D G3DSA:3.40.50.1980 147 275 1.2E-8 T 22-04-2016 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 PANTHER PTHR30557 131 161 0.0 T 22-04-2016 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 PANTHER PTHR30557 22 97 0.0 T 22-04-2016 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 PANTHER PTHR30557 196 624 0.0 T 22-04-2016 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 Pfam PF13667 ThiC-associated domain 23 99 1.7E-31 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 PANTHER PTHR30557:SF1 131 161 0.0 T 22-04-2016 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 PANTHER PTHR30557:SF1 22 97 0.0 T 22-04-2016 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 PANTHER PTHR30557:SF1 196 624 0.0 T 22-04-2016 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 597 2.6E-214 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 599 56.876 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RMET_RS00825 43567d271e0a5d50360060055e22e4d2 625 Pfam PF01964 Radical SAM ThiC family 140 594 2.1E-198 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 PANTHER PTHR26402:SF571 1 139 4.1E-61 T 22-04-2016 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 88 102 7.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 102 118 7.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 118 130 7.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 Gene3D G3DSA:3.40.50.2300 2 92 2.9E-19 T 22-04-2016 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 Pfam PF00196 Bacterial regulatory proteins, luxR family 87 142 3.7E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 Pfam PF00072 Response regulator receiver domain 2 61 5.1E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 PANTHER PTHR26402 1 139 4.1E-61 T 22-04-2016 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 SUPERFAMILY SSF52172 2 94 4.55E-19 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 SUPERFAMILY SSF46894 79 148 1.16E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 Gene3D G3DSA:1.10.10.10 93 148 1.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09600 567e4dbf7422cfc4b7405c3ed90b73d9 152 SMART SM00421 85 142 1.5E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS24125 b79e83463bef4da89fe24a3fb54f100d 192 PANTHER PTHR24220 1 192 1.5E-99 T 22-04-2016 RMET_RS24125 b79e83463bef4da89fe24a3fb54f100d 192 SUPERFAMILY SSF52540 1 188 3.71E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS24125 b79e83463bef4da89fe24a3fb54f100d 192 SMART SM00382 5 184 5.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS24125 b79e83463bef4da89fe24a3fb54f100d 192 Pfam PF00005 ABC transporter 1 151 3.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS24125 b79e83463bef4da89fe24a3fb54f100d 192 Gene3D G3DSA:3.40.50.300 1 188 2.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS24125 b79e83463bef4da89fe24a3fb54f100d 192 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS24125 b79e83463bef4da89fe24a3fb54f100d 192 PANTHER PTHR24220:SF534 1 192 1.5E-99 T 22-04-2016 RMET_RS20590 a4afb6e58c16d7c097754684ad5ce00a 390 SUPERFAMILY SSF56954 153 390 4.32E-64 T 22-04-2016 RMET_RS20590 a4afb6e58c16d7c097754684ad5ce00a 390 SUPERFAMILY SSF56954 87 120 4.32E-64 T 22-04-2016 RMET_RS20590 a4afb6e58c16d7c097754684ad5ce00a 390 PANTHER PTHR30203:SF7 79 390 1.9E-67 T 22-04-2016 RMET_RS20590 a4afb6e58c16d7c097754684ad5ce00a 390 Gene3D G3DSA:1.20.1600.10 150 390 9.4E-62 T 22-04-2016 RMET_RS20590 a4afb6e58c16d7c097754684ad5ce00a 390 Pfam PF02321 Outer membrane efflux protein 162 345 2.7E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS20590 a4afb6e58c16d7c097754684ad5ce00a 390 PANTHER PTHR30203 79 390 1.9E-67 T 22-04-2016 RMET_RS20590 a4afb6e58c16d7c097754684ad5ce00a 390 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 100 390 7.1E-74 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS03845 bf788b470f4f81816c6140fcd3f5ed9f 163 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 12 162 1.8E-52 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 RMET_RS03845 bf788b470f4f81816c6140fcd3f5ed9f 163 Pfam PF06754 Phosphonate metabolism protein PhnG 13 161 1.7E-49 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 PANTHER PTHR30093:SF9 15 154 3.4E-70 T 22-04-2016 RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 57 75 5.3E-17 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 21 46 5.3E-17 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 Gene3D G3DSA:3.30.700.10 22 87 4.6E-10 T 22-04-2016 RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 1.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 20 154 1.5E-61 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 Pfam PF13633 Prokaryotic N-terminal methylation site 20 43 8.2E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 Pfam PF08334 Type II secretion system (T2SS), protein G 44 153 8.0E-45 T 22-04-2016 IPR013545 Type II secretion system protein G RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 PANTHER PTHR30093 15 154 3.4E-70 T 22-04-2016 RMET_RS17000 7e4eedb416d5de536c1c6f227bb98184 154 SUPERFAMILY SSF54523 48 154 5.76E-41 T 22-04-2016 RMET_RS08655 e105aa9ae26ca122bf2b682fc2c2af73 405 SUPERFAMILY SSF89796 4 405 2.49E-137 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS08655 e105aa9ae26ca122bf2b682fc2c2af73 405 PANTHER PTHR24023 78 392 3.1E-38 T 22-04-2016 RMET_RS08655 e105aa9ae26ca122bf2b682fc2c2af73 405 PANTHER PTHR24023:SF593 78 392 3.1E-38 T 22-04-2016 RMET_RS08655 e105aa9ae26ca122bf2b682fc2c2af73 405 Gene3D G3DSA:3.30.1540.10 232 314 7.4E-27 T 22-04-2016 RMET_RS08655 e105aa9ae26ca122bf2b682fc2c2af73 405 Pfam PF02515 CoA-transferase family III 5 381 1.5E-124 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS08655 e105aa9ae26ca122bf2b682fc2c2af73 405 Gene3D G3DSA:3.40.50.10540 3 226 2.0E-112 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS08655 e105aa9ae26ca122bf2b682fc2c2af73 405 Gene3D G3DSA:3.40.50.10540 315 405 2.0E-112 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS17465 d25e090224995d456e98e9deb5f1ed4f 392 Gene3D G3DSA:3.40.50.2300 56 245 3.0E-12 T 22-04-2016 RMET_RS17465 d25e090224995d456e98e9deb5f1ed4f 392 SUPERFAMILY SSF53822 57 357 1.24E-27 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS17465 d25e090224995d456e98e9deb5f1ed4f 392 Pfam PF13458 Periplasmic binding protein 56 361 1.9E-24 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 PANTHER PTHR11473 49 262 4.9E-72 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 39 280 1.3E-118 T 22-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 104 126 7.6E-11 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 241 260 7.6E-11 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 209 227 7.6E-11 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 147 158 - T 22-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 Gene3D G3DSA:1.10.800.10 35 306 6.1E-98 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 45 264 6.4E-44 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RMET_RS17750 3582d1e2d060fe10f4d5687df6839b09 310 SUPERFAMILY SSF56534 28 307 2.09E-107 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 PANTHER PTHR32120 18 322 6.6E-92 T 22-04-2016 RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 PANTHER PTHR32120:SF2 18 322 6.6E-92 T 22-04-2016 RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 Gene3D G3DSA:2.40.50.140 24 77 4.7E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 SUPERFAMILY SSF52540 91 321 6.21E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 Pfam PF03193 Protein of unknown function, DUF258 76 256 2.5E-47 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 SUPERFAMILY SSF50249 24 79 1.8E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 Gene3D G3DSA:3.40.50.300 91 256 3.0E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 Gene3D G3DSA:1.10.40.50 258 322 9.5E-23 T 22-04-2016 RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 56 314 7.5E-64 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RMET_RS12945 d558c90668f0b0a55fb6bc91e5605ec1 323 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 21 321 34.344 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 SUPERFAMILY SSF51735 152 324 1.16E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 SUPERFAMILY SSF50129 1 185 9.59E-57 T 22-04-2016 IPR011032 GroES-like RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 SMART SM00829 10 357 2.7E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 Pfam PF00107 Zinc-binding dehydrogenase 190 316 2.4E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 SUPERFAMILY SSF50129 312 359 1.18E-8 T 22-04-2016 IPR011032 GroES-like RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 Gene3D G3DSA:3.40.50.720 183 302 9.0E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 147 2.7E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 PANTHER PTHR11695:SF269 121 359 2.8E-117 T 22-04-2016 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 PANTHER PTHR11695:SF269 13 105 2.8E-117 T 22-04-2016 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 PANTHER PTHR11695 121 359 2.8E-117 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 PANTHER PTHR11695 13 105 2.8E-117 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS02755 f43629d71eb926b714e5c735884ee499 365 Gene3D G3DSA:3.90.180.10 1 182 3.1E-59 T 22-04-2016 IPR011032 GroES-like RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 SUPERFAMILY SSF51556 133 348 4.54E-11 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 SUPERFAMILY SSF51556 59 106 4.54E-11 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 Pfam PF01979 Amidohydrolase family 239 368 1.3E-6 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 PIRSF PIRSF038971 17 382 1.2E-105 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 Gene3D G3DSA:2.30.40.10 15 100 2.0E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 PANTHER PTHR11271:SF43 49 360 5.3E-27 T 22-04-2016 RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 Gene3D G3DSA:2.30.40.10 357 382 1.1E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 Gene3D G3DSA:3.20.20.140 286 356 2.7E-7 T 22-04-2016 RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 PANTHER PTHR11271 49 360 5.3E-27 T 22-04-2016 RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 SUPERFAMILY SSF51338 15 58 9.12E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS03855 aa278ec5e408537c9f302420a20ec7a3 407 SUPERFAMILY SSF51338 348 387 9.12E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS03415 3a9100a11d6f7fa884be33ed038319e6 478 PANTHER PTHR11699 1 477 2.1E-201 T 22-04-2016 RMET_RS03415 3a9100a11d6f7fa884be33ed038319e6 478 SUPERFAMILY SSF53720 2 476 3.27E-156 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS03415 3a9100a11d6f7fa884be33ed038319e6 478 Gene3D G3DSA:3.40.605.10 2 260 8.7E-91 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS03415 3a9100a11d6f7fa884be33ed038319e6 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RMET_RS03415 3a9100a11d6f7fa884be33ed038319e6 478 Pfam PF00171 Aldehyde dehydrogenase family 18 473 7.9E-158 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS03415 3a9100a11d6f7fa884be33ed038319e6 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RMET_RS03415 3a9100a11d6f7fa884be33ed038319e6 478 Gene3D G3DSA:3.40.309.10 261 449 2.1E-57 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 PANTHER PTHR24220 23 260 4.1E-133 T 22-04-2016 RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 SMART SM00382 46 244 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 Pfam PF00005 ABC transporter 37 188 2.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 PANTHER PTHR24220:SF497 23 260 4.1E-133 T 22-04-2016 RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 SUPERFAMILY SSF52540 22 259 6.35E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 21 263 3.3E-116 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 Gene3D G3DSA:3.40.50.300 14 256 5.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01545 79baa9921e5a96589265f952bca5c4dc 263 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 237 258 9.5E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS06530 8398e4a0df0d751d1fc6535ddfc6c5f6 200 Pfam PF04955 HupE / UreJ protein 15 195 4.9E-45 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RMET_RS06530 8398e4a0df0d751d1fc6535ddfc6c5f6 200 PIRSF PIRSF016919 1 199 4.6E-51 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 PANTHER PTHR11079 2 233 2.4E-113 T 22-04-2016 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 PANTHER PTHR11079 251 288 2.4E-113 T 22-04-2016 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 SUPERFAMILY SSF55174 3 40 9.65E-6 T 22-04-2016 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 107 121 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 Pfam PF00849 RNA pseudouridylate synthase 65 219 4.7E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 2 287 8.9E-88 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 SUPERFAMILY SSF55120 51 287 2.67E-74 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 PANTHER PTHR11079:SF73 2 233 2.4E-113 T 22-04-2016 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 PANTHER PTHR11079:SF73 251 288 2.4E-113 T 22-04-2016 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 Gene3D G3DSA:3.10.290.10 3 39 1.2E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS24710 fe997ca47f4b3d13dfb1925aeb4f70db 288 Pfam PF01479 S4 domain 4 32 5.7E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS17085 2919b4f885a849222b21918a868d7b70 293 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 279 2.8E-49 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RMET_RS17085 2919b4f885a849222b21918a868d7b70 293 SUPERFAMILY SSF53213 1 280 1.83E-80 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RMET_RS17085 2919b4f885a849222b21918a868d7b70 293 PANTHER PTHR30096 1 283 2.2E-92 T 22-04-2016 RMET_RS17085 2919b4f885a849222b21918a868d7b70 293 Gene3D G3DSA:3.40.830.10 2 280 7.5E-88 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RMET_RS17085 2919b4f885a849222b21918a868d7b70 293 PANTHER PTHR30096:SF0 1 283 2.2E-92 T 22-04-2016 RMET_RS17085 2919b4f885a849222b21918a868d7b70 293 PIRSF PIRSF006157 1 281 1.8E-84 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.2E-39 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 Gene3D G3DSA:3.40.1280.10 94 244 6.8E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 PANTHER PTHR12029 6 246 7.6E-72 T 22-04-2016 RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 Gene3D G3DSA:3.30.1330.30 1 76 1.0E-21 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 3.7E-73 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 SUPERFAMILY SSF75217 88 245 3.99E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 SUPERFAMILY SSF55315 3 78 6.59E-18 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 244 44.441 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 78 3.1E-16 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RMET_RS10465 dbb42e59a3e8de75184badabdb0a920a 247 SMART SM00967 6 82 7.6E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RMET_RS13665 a22844be193ce342c23106bb3e5fdc9d 364 PANTHER PTHR12526 20 361 4.0E-53 T 22-04-2016 RMET_RS13665 a22844be193ce342c23106bb3e5fdc9d 364 SUPERFAMILY SSF53756 8 359 6.63E-75 T 22-04-2016 RMET_RS13665 a22844be193ce342c23106bb3e5fdc9d 364 Gene3D G3DSA:3.40.50.2000 182 339 2.5E-30 T 22-04-2016 RMET_RS13665 a22844be193ce342c23106bb3e5fdc9d 364 Pfam PF00534 Glycosyl transferases group 1 179 340 2.5E-41 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RMET_RS13665 a22844be193ce342c23106bb3e5fdc9d 364 Pfam PF13439 Glycosyltransferase Family 4 20 172 3.5E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RMET_RS03790 6e20bd87db11a19625551f8a224197c2 420 Gene3D G3DSA:3.40.50.2000 200 381 5.0E-23 T 22-04-2016 RMET_RS03790 6e20bd87db11a19625551f8a224197c2 420 Pfam PF00534 Glycosyl transferases group 1 231 379 2.7E-30 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RMET_RS03790 6e20bd87db11a19625551f8a224197c2 420 PANTHER PTHR12526:SF374 14 55 2.6E-42 T 22-04-2016 RMET_RS03790 6e20bd87db11a19625551f8a224197c2 420 PANTHER PTHR12526:SF374 83 409 2.6E-42 T 22-04-2016 RMET_RS03790 6e20bd87db11a19625551f8a224197c2 420 PANTHER PTHR12526 14 55 2.6E-42 T 22-04-2016 RMET_RS03790 6e20bd87db11a19625551f8a224197c2 420 PANTHER PTHR12526 83 409 2.6E-42 T 22-04-2016 RMET_RS03790 6e20bd87db11a19625551f8a224197c2 420 SUPERFAMILY SSF53756 17 397 3.3E-60 T 22-04-2016 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 SUPERFAMILY SSF109604 10 203 5.02E-44 T 22-04-2016 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 Pfam PF13328 HD domain 23 190 6.8E-50 T 22-04-2016 IPR003607 HD/PDEase domain RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 Gene3D G3DSA:3.10.20.30 413 473 7.8E-21 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 Pfam PF02824 TGS domain 413 471 1.7E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 54 741 9.7E-180 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 SUPERFAMILY SSF81301 206 386 1.19E-63 T 22-04-2016 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 Gene3D G3DSA:3.30.70.260 668 739 3.6E-16 T 22-04-2016 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 Gene3D G3DSA:3.30.460.10 191 338 8.9E-51 T 22-04-2016 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 Pfam PF04607 Region found in RelA / SpoT proteins 249 358 7.0E-38 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 PANTHER PTHR21262 45 742 7.4E-274 T 22-04-2016 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 SUPERFAMILY SSF55021 666 741 8.74E-14 T 22-04-2016 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 SUPERFAMILY SSF81271 406 471 2.83E-19 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 PANTHER PTHR21262:SF5 45 742 7.4E-274 T 22-04-2016 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 Pfam PF13291 ACT domain 666 741 1.6E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RMET_RS05830 fcccc5bc71c930ed531b9fbaaab35f4f 742 SMART SM00954 249 359 2.4E-65 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RMET_RS09860 ce40d38a80243e32910c2b7e4b0067d8 409 PANTHER PTHR11751:SF303 9 405 3.6E-173 T 22-04-2016 RMET_RS09860 ce40d38a80243e32910c2b7e4b0067d8 409 Gene3D G3DSA:3.90.1150.10 280 404 2.9E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS09860 ce40d38a80243e32910c2b7e4b0067d8 409 PANTHER PTHR11751 9 405 3.6E-173 T 22-04-2016 RMET_RS09860 ce40d38a80243e32910c2b7e4b0067d8 409 Pfam PF00155 Aminotransferase class I and II 34 395 1.3E-50 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS09860 ce40d38a80243e32910c2b7e4b0067d8 409 Gene3D G3DSA:3.40.640.10 51 279 1.1E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS09860 ce40d38a80243e32910c2b7e4b0067d8 409 SUPERFAMILY SSF53383 5 402 8.34E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 Gene3D G3DSA:3.50.50.60 14 228 2.8E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 Gene3D G3DSA:3.50.50.60 338 478 4.3E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 SUPERFAMILY SSF51905 17 402 1.04E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 PANTHER PTHR23023 17 492 2.2E-205 T 22-04-2016 RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 PANTHER PTHR23023:SF30 17 492 2.2E-205 T 22-04-2016 RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 Pfam PF00743 Flavin-binding monooxygenase-like 92 229 1.7E-11 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 193 218 2.0E-6 T 22-04-2016 RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 21 43 2.0E-6 T 22-04-2016 RMET_RS07875 d10a7ca5d99be074f61f6d78db6e1cf9 510 Pfam PF13450 NAD(P)-binding Rossmann-like domain 24 72 3.0E-8 T 22-04-2016 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 Gene3D G3DSA:3.30.70.20 11 64 2.6E-16 T 22-04-2016 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 SUPERFAMILY SSF54862 11 64 4.42E-17 T 22-04-2016 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 17 28 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PIRSF PIRSF000361 53 415 1.3E-70 T 22-04-2016 IPR015701 Ferredoxin--NADP reductase GO:0016491|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 SUPERFAMILY SSF52343 265 415 3.14E-33 T 22-04-2016 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 Gene3D G3DSA:2.40.30.10 129 261 9.5E-40 T 22-04-2016 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 SUPERFAMILY SSF63380 131 269 1.19E-36 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 Pfam PF00037 4Fe-4S binding domain 12 33 1.7E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 Gene3D G3DSA:3.40.50.80 263 413 7.4E-33 T 22-04-2016 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PANTHER PTHR19384 158 415 3.3E-70 T 22-04-2016 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 312 2.4E-16 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 345 361 2.4E-16 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 240 249 2.4E-16 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 369 377 2.4E-16 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 2.4E-16 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 181 191 2.4E-16 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 2.4E-16 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PANTHER PTHR19384:SF69 158 415 3.3E-70 T 22-04-2016 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 PIRSF PIRSF501177 1 415 8.8E-217 T 22-04-2016 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 Pfam PF00175 Oxidoreductase NAD-binding domain 277 382 3.0E-14 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS06160 0313446ffbaf2667e09b294b2c4e1b60 415 TIGRFAM TIGR03224 benzo_boxA: benzoyl-CoA oxygenase/reductase, BoxA protein 6 415 7.2E-247 T 22-04-2016 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 RMET_RS17195 9599c3229b85b0e0427be113fd32b3f4 103 SUPERFAMILY SSF81296 1 102 1.11E-32 T 22-04-2016 IPR014756 Immunoglobulin E-set RMET_RS17195 9599c3229b85b0e0427be113fd32b3f4 103 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 102 3.7E-39 T 22-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ RMET_RS17195 9599c3229b85b0e0427be113fd32b3f4 103 Pfam PF08770 Sulphur oxidation protein SoxZ 7 100 3.2E-36 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ RMET_RS17195 9599c3229b85b0e0427be113fd32b3f4 103 Gene3D G3DSA:2.60.40.10 4 102 6.9E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 Gene3D G3DSA:1.20.120.530 94 230 4.9E-29 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 Pfam PF07729 FCD domain 96 224 9.9E-23 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 SUPERFAMILY SSF48008 94 230 3.92E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 SUPERFAMILY SSF46785 2 77 2.73E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 SMART SM00895 96 225 1.2E-23 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 SMART SM00345 14 73 3.0E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 4.7E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 PANTHER PTHR11751 13 112 2.1E-24 T 22-04-2016 RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 Gene3D G3DSA:1.10.10.10 6 76 4.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.75E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS05740 e8c033c4775c46a338a0f5c9e5fb34e7 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.75E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 PANTHER PTHR11731 176 443 3.2E-74 T 22-04-2016 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 PANTHER PTHR11731 8 139 3.2E-74 T 22-04-2016 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 37 442 1.1E-157 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Gene3D G3DSA:2.130.10.10 167 443 4.1E-76 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 PANTHER PTHR11731:SF123 176 443 3.2E-74 T 22-04-2016 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 PANTHER PTHR11731:SF123 8 139 3.2E-74 T 22-04-2016 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Pfam PF04052 TolB amino-terminal domain 45 145 2.8E-28 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 SUPERFAMILY SSF69304 172 443 7.85E-58 T 22-04-2016 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 SUPERFAMILY SSF52964 50 177 6.02E-36 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Hamap MF_00671 Protein TolB [tolB]. 28 441 34.732 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Pfam PF07676 WD40-like Beta Propeller Repeat 293 329 1.4E-13 T 22-04-2016 IPR011659 WD40-like Beta Propeller RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Pfam PF07676 WD40-like Beta Propeller Repeat 385 413 0.0095 T 22-04-2016 IPR011659 WD40-like Beta Propeller RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Pfam PF07676 WD40-like Beta Propeller Repeat 252 285 2.1E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Pfam PF07676 WD40-like Beta Propeller Repeat 210 241 9.3E-7 T 22-04-2016 IPR011659 WD40-like Beta Propeller RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Pfam PF07676 WD40-like Beta Propeller Repeat 341 371 7.4E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller RMET_RS13430 9ea2063b073aa7ea19cfc8666c2ec12f 446 Gene3D G3DSA:3.40.50.10070 44 166 1.4E-45 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RMET_RS14600 efef66893189aecefa7f3ed9e6c130b9 224 Gene3D G3DSA:3.40.50.1000 81 223 1.6E-48 T 22-04-2016 IPR023214 HAD-like domain RMET_RS14600 efef66893189aecefa7f3ed9e6c130b9 224 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 195 1.1E-39 T 22-04-2016 RMET_RS14600 efef66893189aecefa7f3ed9e6c130b9 224 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 208 1.4E-34 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RMET_RS14600 efef66893189aecefa7f3ed9e6c130b9 224 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 197 3.9E-19 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RMET_RS14600 efef66893189aecefa7f3ed9e6c130b9 224 PANTHER PTHR10000 1 223 3.0E-44 T 22-04-2016 RMET_RS14600 efef66893189aecefa7f3ed9e6c130b9 224 PANTHER PTHR10000:SF10 1 223 3.0E-44 T 22-04-2016 RMET_RS14600 efef66893189aecefa7f3ed9e6c130b9 224 SUPERFAMILY SSF56784 2 217 2.03E-31 T 22-04-2016 IPR023214 HAD-like domain RMET_RS14600 efef66893189aecefa7f3ed9e6c130b9 224 Gene3D G3DSA:1.20.1440.100 15 80 1.5E-32 T 22-04-2016 RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 6.8E-52 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 SUPERFAMILY SSF52518 369 564 1.02E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 PANTHER PTHR18968:SF14 1 579 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 SUPERFAMILY SSF52518 1 184 1.52E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 Gene3D G3DSA:3.40.50.1220 184 336 1.4E-49 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 PANTHER PTHR18968 1 579 0.0 T 22-04-2016 RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 SUPERFAMILY SSF52467 186 376 1.05E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 1.5E-35 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 3 581 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 Gene3D G3DSA:3.40.50.970 3 181 6.0E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 8.2E-36 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RMET_RS17325 bcef8f0f25696e12edaad51dc6f49d8d 596 Gene3D G3DSA:3.40.50.970 360 581 1.0E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS12890 1a91a1f6281b93e0f93f61800e79024e 418 PANTHER PTHR23150 201 347 1.1E-31 T 22-04-2016 RMET_RS12890 1a91a1f6281b93e0f93f61800e79024e 418 SUPERFAMILY SSF56436 201 416 1.29E-48 T 22-04-2016 IPR016187 C-type lectin fold RMET_RS12890 1a91a1f6281b93e0f93f61800e79024e 418 Gene3D G3DSA:3.90.1580.10 201 346 2.3E-34 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RMET_RS12890 1a91a1f6281b93e0f93f61800e79024e 418 Gene3D G3DSA:3.90.1580.10 347 416 5.2E-9 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RMET_RS12890 1a91a1f6281b93e0f93f61800e79024e 418 SUPERFAMILY SSF109854 27 156 5.04E-5 T 22-04-2016 RMET_RS12890 1a91a1f6281b93e0f93f61800e79024e 418 PANTHER PTHR23150:SF24 201 347 1.1E-31 T 22-04-2016 RMET_RS12890 1a91a1f6281b93e0f93f61800e79024e 418 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 30 416 1.1E-112 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 RMET_RS12890 1a91a1f6281b93e0f93f61800e79024e 418 Pfam PF03781 Sulfatase-modifying factor enzyme 1 202 340 2.5E-22 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RMET_RS00235 22e6920ecbce4be18337a9fd0da5c759 882 PANTHER PTHR34595:SF1 255 879 5.4E-198 T 22-04-2016 RMET_RS00235 22e6920ecbce4be18337a9fd0da5c759 882 PANTHER PTHR34595:SF1 25 239 5.4E-198 T 22-04-2016 RMET_RS00235 22e6920ecbce4be18337a9fd0da5c759 882 SUPERFAMILY SSF56059 82 232 3.88E-12 T 22-04-2016 RMET_RS00235 22e6920ecbce4be18337a9fd0da5c759 882 PANTHER PTHR34595 255 879 5.4E-198 T 22-04-2016 RMET_RS00235 22e6920ecbce4be18337a9fd0da5c759 882 PANTHER PTHR34595 25 239 5.4E-198 T 22-04-2016 RMET_RS00235 22e6920ecbce4be18337a9fd0da5c759 882 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 548 870 1.2E-53 T 22-04-2016 IPR007296 Domain of unknown function DUF403 RMET_RS00235 22e6920ecbce4be18337a9fd0da5c759 882 Pfam PF14403 Circularly permuted ATP-grasp type 2 97 492 1.5E-142 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 PANTHER PTHR30126:SF34 1 290 3.5E-63 T 22-04-2016 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 Gene3D G3DSA:3.40.190.10 89 180 1.6E-18 T 22-04-2016 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 SUPERFAMILY SSF53850 90 296 8.69E-39 T 22-04-2016 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 Pfam PF03466 LysR substrate binding domain 87 293 5.4E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS05975 be117320856989637e1d9cdb675b1735 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 SUPERFAMILY SSF46785 1 86 2.99E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05975 be117320856989637e1d9cdb675b1735 299 Gene3D G3DSA:1.10.10.10 1 87 6.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05975 be117320856989637e1d9cdb675b1735 299 PANTHER PTHR30126 1 290 3.5E-63 T 22-04-2016 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS05975 be117320856989637e1d9cdb675b1735 299 Gene3D G3DSA:3.40.190.10 181 262 4.0E-22 T 22-04-2016 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 SUPERFAMILY SSF47819 539 614 2.18E-21 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Pfam PF09382 RQC domain 407 522 7.8E-40 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 PANTHER PTHR13710 1 615 6.3E-274 T 22-04-2016 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 468 5.8E-154 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 SUPERFAMILY SSF52540 203 463 6.46E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Pfam PF00570 HRDC domain 547 612 1.4E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Pfam PF16124 RecQ zinc-binding 344 405 2.5E-17 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Gene3D G3DSA:3.40.50.300 201 345 1.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Gene3D G3DSA:1.10.10.10 346 521 2.3E-57 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 SMART SM00487 13 213 1.2E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 SMART SM00341 542 614 4.7E-11 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Gene3D G3DSA:1.10.150.80 549 613 4.7E-15 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 SUPERFAMILY SSF52540 4 200 5.74E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Gene3D G3DSA:3.40.50.300 3 198 4.8E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 SMART SM00490 251 332 4.4E-24 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Pfam PF00270 DEAD/DEAH box helicase 21 180 3.9E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 Pfam PF00271 Helicase conserved C-terminal domain 236 332 3.9E-15 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 PANTHER PTHR13710:SF81 1 615 6.3E-274 T 22-04-2016 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 614 4.9E-239 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 RMET_RS16690 db305f89248ddf33e13cc71f24e8a98c 615 SMART SM00956 412 519 3.9E-54 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RMET_RS00905 19df5e0c5e5f7309764280d6ea7a4e61 229 Gene3D G3DSA:3.40.30.10 9 94 1.4E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS00905 19df5e0c5e5f7309764280d6ea7a4e61 229 PANTHER PTHR11260 7 197 1.9E-55 T 22-04-2016 RMET_RS00905 19df5e0c5e5f7309764280d6ea7a4e61 229 Gene3D G3DSA:1.20.1050.10 95 206 4.1E-46 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS00905 19df5e0c5e5f7309764280d6ea7a4e61 229 PANTHER PTHR11260:SF144 7 197 1.9E-55 T 22-04-2016 RMET_RS00905 19df5e0c5e5f7309764280d6ea7a4e61 229 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 80 2.0E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS00905 19df5e0c5e5f7309764280d6ea7a4e61 229 Pfam PF13410 Glutathione S-transferase, C-terminal domain 129 201 2.9E-6 T 22-04-2016 RMET_RS00905 19df5e0c5e5f7309764280d6ea7a4e61 229 SUPERFAMILY SSF47616 81 200 2.7E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS00905 19df5e0c5e5f7309764280d6ea7a4e61 229 SUPERFAMILY SSF52833 2 85 6.35E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS00385 249a0a449902ec5f1205bded053abb0b 277 PANTHER PTHR34265 1 275 2.1E-25 T 22-04-2016 RMET_RS00385 249a0a449902ec5f1205bded053abb0b 277 Pfam PF03309 Type III pantothenate kinase 4 231 6.0E-60 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RMET_RS00385 249a0a449902ec5f1205bded053abb0b 277 SUPERFAMILY SSF53067 4 135 9.06E-24 T 22-04-2016 RMET_RS00385 249a0a449902ec5f1205bded053abb0b 277 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 277 15.993 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RMET_RS00385 249a0a449902ec5f1205bded053abb0b 277 SUPERFAMILY SSF53067 139 273 1.35E-20 T 22-04-2016 RMET_RS00385 249a0a449902ec5f1205bded053abb0b 277 Gene3D G3DSA:3.30.420.40 110 274 4.9E-35 T 22-04-2016 RMET_RS08890 bd566d583763487bf86594a099a7d7cb 463 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 51 84 - T 22-04-2016 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 RMET_RS08890 bd566d583763487bf86594a099a7d7cb 463 Gene3D G3DSA:3.30.43.10 40 107 6.7E-16 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS08890 bd566d583763487bf86594a099a7d7cb 463 PANTHER PTHR11748 17 463 3.9E-108 T 22-04-2016 RMET_RS08890 bd566d583763487bf86594a099a7d7cb 463 PANTHER PTHR11748:SF86 17 463 3.9E-108 T 22-04-2016 RMET_RS08890 bd566d583763487bf86594a099a7d7cb 463 Pfam PF01565 FAD binding domain 51 185 7.1E-34 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS08890 bd566d583763487bf86594a099a7d7cb 463 Pfam PF08031 Berberine and berberine like 424 460 1.2E-10 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 RMET_RS08890 bd566d583763487bf86594a099a7d7cb 463 Gene3D G3DSA:3.30.465.10 108 218 3.4E-17 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS08890 bd566d583763487bf86594a099a7d7cb 463 SUPERFAMILY SSF56176 23 217 1.4E-58 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 143 26.166 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 140 5.0E-44 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 SUPERFAMILY SSF81330 12 136 7.06E-36 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 PANTHER PTHR30266:SF2 1 141 6.2E-49 T 22-04-2016 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 PANTHER PTHR30266 1 141 6.2E-49 T 22-04-2016 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 7.4E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 7.4E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 7.4E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RMET_RS16205 a0fbe991f39895a1e8f512a768f8beca 144 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 140 6.2E-41 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 SUPERFAMILY SSF55785 448 575 1.37E-9 T 22-04-2016 IPR000014 PAS domain RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PANTHER PTHR24423 433 721 2.3E-54 T 22-04-2016 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PANTHER PTHR24423 739 807 2.3E-54 T 22-04-2016 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PANTHER PTHR24423 17 23 2.3E-54 T 22-04-2016 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 Gene3D G3DSA:1.10.287.130 585 643 4.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 701 814 2.4E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 SMART SM00304 390 442 1.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 772 782 6.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 783 801 6.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 768 6.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 Pfam PF00512 His Kinase A (phospho-acceptor) domain 586 653 1.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 SMART SM00387 701 827 8.4E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 SMART SM00388 585 657 7.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 SUPERFAMILY SSF55874 646 811 4.19E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 Pfam PF00672 HAMP domain 372 438 6.4E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PANTHER PTHR24423:SF471 433 721 2.3E-54 T 22-04-2016 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PANTHER PTHR24423:SF471 739 807 2.3E-54 T 22-04-2016 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 PANTHER PTHR24423:SF471 17 23 2.3E-54 T 22-04-2016 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 SUPERFAMILY SSF47384 582 654 7.46E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 Gene3D G3DSA:3.30.565.10 644 812 3.2E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 SUPERFAMILY SSF158472 392 439 4.97E-9 T 22-04-2016 RMET_RS17885 ee1d29514a1c08b492660ee72b1da58b 827 Gene3D G3DSA:3.30.450.20 450 575 8.0E-14 T 22-04-2016 RMET_RS07815 74493115b83a075a2774a601c48cc7a6 809 Gene3D G3DSA:3.40.50.300 419 507 8.6E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07815 74493115b83a075a2774a601c48cc7a6 809 Gene3D G3DSA:3.40.50.300 603 713 8.6E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07815 74493115b83a075a2774a601c48cc7a6 809 SUPERFAMILY SSF52540 399 738 8.67E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07815 74493115b83a075a2774a601c48cc7a6 809 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 182 388 2.4E-14 T 22-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 RMET_RS07815 74493115b83a075a2774a601c48cc7a6 809 SMART SM00382 440 704 2.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 PANTHER PTHR23515:SF6 1 371 2.3E-187 T 22-04-2016 RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 PANTHER PTHR23515:SF6 394 458 2.3E-187 T 22-04-2016 RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 Pfam PF07690 Major Facilitator Superfamily 36 371 4.2E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 PANTHER PTHR23515 1 371 2.3E-187 T 22-04-2016 RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 PANTHER PTHR23515 394 458 2.3E-187 T 22-04-2016 RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 SUPERFAMILY SSF103473 26 454 6.93E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 Gene3D G3DSA:1.20.1250.20 248 451 3.4E-12 T 22-04-2016 RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 Gene3D G3DSA:1.20.1250.20 22 226 9.1E-16 T 22-04-2016 RMET_RS10370 afcdde9218d5c122b7bf0e1edbd0d598 460 TIGRFAM TIGR00886 2A0108: nitrite transporter 27 412 1.1E-107 T 22-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.9E-50 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 SUPERFAMILY SSF74731 2 115 2.09E-50 T 22-04-2016 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 Pfam PF00453 Ribosomal protein L20 3 109 2.4E-50 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.1 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 6.0E-23 T 22-04-2016 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 Gene3D G3DSA:1.10.1900.20 55 117 6.2E-31 T 22-04-2016 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 PANTHER PTHR10986 2 115 1.4E-63 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.4E-39 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.4E-39 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RMET_RS05855 daadfe271034ebd14a7cedf254cf355c 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.4E-39 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 Gene3D G3DSA:3.40.1060.10 167 279 4.5E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PANTHER PTHR11670:SF38 1 307 5.9E-296 T 22-04-2016 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PANTHER PTHR11670:SF38 327 468 5.9E-296 T 22-04-2016 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 469 60.75 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 468 2.8E-241 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 Gene3D G3DSA:3.30.499.10 335 468 1.0E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 Gene3D G3DSA:3.30.499.10 293 303 1.0E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 SUPERFAMILY SSF53732 2 468 4.58E-165 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 343 354 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 195 208 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 209 222 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 402 415 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 286 300 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 108 116 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 119 132 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 133 148 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PRINTS PR00415 Aconitase family signature 82 95 5.1E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PANTHER PTHR11670 1 307 5.9E-296 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 PANTHER PTHR11670 327 468 5.9E-296 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 460 6.1E-155 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12420 c45609434e941812ba4b2f3cd2913d89 469 Gene3D G3DSA:3.30.499.10 6 157 7.4E-20 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01445 bfdf9c1b35dc73eb486ba6f1ff82a72e 186 PIRSF PIRSF004553 1 180 7.3E-43 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS01445 bfdf9c1b35dc73eb486ba6f1ff82a72e 186 SUPERFAMILY SSF53335 1 179 1.2E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01445 bfdf9c1b35dc73eb486ba6f1ff82a72e 186 PANTHER PTHR18895 1 178 6.8E-41 T 22-04-2016 RMET_RS01445 bfdf9c1b35dc73eb486ba6f1ff82a72e 186 Pfam PF03602 Conserved hypothetical protein 95 1 177 9.9E-49 T 22-04-2016 RMET_RS01445 bfdf9c1b35dc73eb486ba6f1ff82a72e 186 Gene3D G3DSA:3.40.50.150 1 179 6.2E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01445 bfdf9c1b35dc73eb486ba6f1ff82a72e 186 PANTHER PTHR18895:SF60 1 178 6.8E-41 T 22-04-2016 RMET_RS01445 bfdf9c1b35dc73eb486ba6f1ff82a72e 186 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 178 2.2E-44 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS01445 bfdf9c1b35dc73eb486ba6f1ff82a72e 186 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RMET_RS18825 aa050fe79243cb659ab57088a90d09e0 140 PANTHER PTHR22748 23 137 8.2E-41 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RMET_RS18825 aa050fe79243cb659ab57088a90d09e0 140 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 137 2.0E-9 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS18825 aa050fe79243cb659ab57088a90d09e0 140 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 25 138 1.9E-32 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RMET_RS18825 aa050fe79243cb659ab57088a90d09e0 140 SUPERFAMILY SSF56219 25 138 2.02E-28 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS18825 aa050fe79243cb659ab57088a90d09e0 140 Gene3D G3DSA:3.60.10.10 18 138 1.9E-37 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS18825 aa050fe79243cb659ab57088a90d09e0 140 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 52 61 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RMET_RS08650 a8eb846094b9b2e4e58cfa0676437aa8 337 PANTHER PTHR30349:SF16 1 305 2.0E-95 T 22-04-2016 RMET_RS08650 a8eb846094b9b2e4e58cfa0676437aa8 337 PIRSF PIRSF017082 5 336 1.8E-72 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08650 a8eb846094b9b2e4e58cfa0676437aa8 337 PANTHER PTHR30349 1 305 2.0E-95 T 22-04-2016 RMET_RS08650 a8eb846094b9b2e4e58cfa0676437aa8 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 61 334 6.1E-86 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08650 a8eb846094b9b2e4e58cfa0676437aa8 337 SUPERFAMILY SSF53850 134 305 6.12E-10 T 22-04-2016 RMET_RS16630 4854675c1bbbdd9568cebeaf12cbd89a 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 31.06 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RMET_RS16630 4854675c1bbbdd9568cebeaf12cbd89a 206 Gene3D G3DSA:3.40.1370.10 58 205 3.8E-52 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RMET_RS16630 4854675c1bbbdd9568cebeaf12cbd89a 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 3.8E-69 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RMET_RS16630 4854675c1bbbdd9568cebeaf12cbd89a 206 SUPERFAMILY SSF52166 1 205 9.81E-67 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RMET_RS16630 4854675c1bbbdd9568cebeaf12cbd89a 206 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 2.7E-60 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RMET_RS16630 4854675c1bbbdd9568cebeaf12cbd89a 206 PANTHER PTHR10746 7 205 1.7E-68 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RMET_RS02730 b614241c58a2ab995245eddeace85a69 247 Pfam PF00440 Bacterial regulatory proteins, tetR family 46 87 3.3E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS02730 b614241c58a2ab995245eddeace85a69 247 Gene3D G3DSA:1.10.357.10 31 228 2.7E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS02730 b614241c58a2ab995245eddeace85a69 247 SUPERFAMILY SSF46689 29 108 1.59E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS01700 e83370efbb870ef5513d1d7d0e1ad801 499 SUPERFAMILY SSF53850 66 288 2.07E-28 T 22-04-2016 RMET_RS01700 e83370efbb870ef5513d1d7d0e1ad801 499 PANTHER PTHR21666 310 480 2.6E-34 T 22-04-2016 RMET_RS01700 e83370efbb870ef5513d1d7d0e1ad801 499 Gene3D G3DSA:1.10.530.10 325 488 5.0E-38 T 22-04-2016 RMET_RS01700 e83370efbb870ef5513d1d7d0e1ad801 499 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 106 285 1.5E-15 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS01700 e83370efbb870ef5513d1d7d0e1ad801 499 SMART SM00062 67 311 6.4E-5 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS01700 e83370efbb870ef5513d1d7d0e1ad801 499 Pfam PF01464 Transglycosylase SLT domain 333 443 7.6E-17 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RMET_RS01700 e83370efbb870ef5513d1d7d0e1ad801 499 Gene3D G3DSA:3.40.190.10 66 199 1.1E-12 T 22-04-2016 RMET_RS01700 e83370efbb870ef5513d1d7d0e1ad801 499 SUPERFAMILY SSF53955 330 484 1.33E-34 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS12340 cf1456f0f4d9d638fe2e2d792954c809 402 Gene3D G3DSA:3.90.1150.10 263 400 3.1E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS12340 cf1456f0f4d9d638fe2e2d792954c809 402 PANTHER PTHR11808:SF36 6 400 6.5E-204 T 22-04-2016 RMET_RS12340 cf1456f0f4d9d638fe2e2d792954c809 402 PANTHER PTHR11808 6 400 6.5E-204 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS12340 cf1456f0f4d9d638fe2e2d792954c809 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 400 2.7E-138 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS12340 cf1456f0f4d9d638fe2e2d792954c809 402 Gene3D G3DSA:3.40.640.10 11 261 1.9E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS12340 cf1456f0f4d9d638fe2e2d792954c809 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 13 400 6.2E-180 T 22-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 RMET_RS12340 cf1456f0f4d9d638fe2e2d792954c809 402 PIRSF PIRSF001434 2 402 7.6E-129 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS12340 cf1456f0f4d9d638fe2e2d792954c809 402 SUPERFAMILY SSF53383 34 401 1.33E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 SUPERFAMILY SSF51905 14 219 6.49E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 SUPERFAMILY SSF51905 316 459 6.49E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 67 4.9E-7 T 22-04-2016 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 188 203 2.0E-6 T 22-04-2016 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 2.0E-6 T 22-04-2016 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 PANTHER PTHR10617 12 484 1.1E-253 T 22-04-2016 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 Gene3D G3DSA:3.50.50.60 16 291 3.5E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 Gene3D G3DSA:3.30.70.20 504 545 5.5E-4 T 22-04-2016 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 SUPERFAMILY SSF54862 461 560 6.86E-30 T 22-04-2016 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 457 558 7.2E-52 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 PANTHER PTHR10617:SF107 12 484 1.1E-253 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RMET_RS05765 acbbb9bcd164be94de49fe1e68a4fcdc 561 SUPERFAMILY SSF54373 221 315 5.1E-38 T 22-04-2016 RMET_RS17290 a989de979baaf7fe9464182c18ced6c3 174 SUPERFAMILY SSF46785 37 164 2.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17290 a989de979baaf7fe9464182c18ced6c3 174 Pfam PF12802 MarR family 60 118 1.0E-9 T 22-04-2016 RMET_RS17290 a989de979baaf7fe9464182c18ced6c3 174 Gene3D G3DSA:1.10.10.10 29 165 1.2E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17290 a989de979baaf7fe9464182c18ced6c3 174 SMART SM00347 55 155 1.4E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS17290 a989de979baaf7fe9464182c18ced6c3 174 PANTHER PTHR33164:SF9 7 166 1.6E-60 T 22-04-2016 RMET_RS17290 a989de979baaf7fe9464182c18ced6c3 174 PANTHER PTHR33164 7 166 1.6E-60 T 22-04-2016 RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 Gene3D G3DSA:3.40.50.720 33 124 4.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 SMART SM00859 4 105 4.2E-13 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 3 306 5.0E-140 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 PANTHER PTHR32338 4 314 1.3E-97 T 22-04-2016 RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 SUPERFAMILY SSF55347 116 288 8.63E-36 T 22-04-2016 RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 44 101 8.0E-9 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 Gene3D G3DSA:3.30.360.10 125 288 4.9E-34 T 22-04-2016 RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 PANTHER PTHR32338:SF9 4 314 1.3E-97 T 22-04-2016 RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 SUPERFAMILY SSF51735 1 137 1.35E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00755 4600bbe840959156f33e435bb31dcc3c 315 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 307 51.627 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 Gene3D G3DSA:3.30.1840.10 112 304 6.0E-64 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 687 6.3E-153 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 Gene3D G3DSA:3.30.870.10 511 690 4.1E-73 T 22-04-2016 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 114 9.1E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 SUPERFAMILY SSF56024 318 503 3.01E-54 T 22-04-2016 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 Gene3D G3DSA:3.30.870.10 319 510 1.6E-75 T 22-04-2016 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 Pfam PF02503 Polyphosphate kinase middle domain 123 324 8.1E-58 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 PANTHER PTHR30218:SF0 10 690 0.0 T 22-04-2016 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 SUPERFAMILY SSF140356 6 110 2.22E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 PIRSF PIRSF015589 1 692 1.7E-262 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 693 32.091 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 SUPERFAMILY SSF56024 511 688 2.92E-70 T 22-04-2016 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 688 8.7E-286 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 SUPERFAMILY SSF143724 114 317 2.16E-60 T 22-04-2016 RMET_RS10935 b5755d2ebb8f30bfc51d8778fbfd29c1 693 PANTHER PTHR30218 10 690 0.0 T 22-04-2016 RMET_RS09480 6a1462915b9a2abd4556558517414df4 266 SUPERFAMILY SSF46894 190 262 2.55E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS09480 6a1462915b9a2abd4556558517414df4 266 Pfam PF00196 Bacterial regulatory proteins, luxR family 206 259 5.3E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS09480 6a1462915b9a2abd4556558517414df4 266 Gene3D G3DSA:1.10.10.10 204 262 2.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09480 6a1462915b9a2abd4556558517414df4 266 SMART SM00421 204 261 2.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS09480 6a1462915b9a2abd4556558517414df4 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 221 1.3E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS09480 6a1462915b9a2abd4556558517414df4 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 237 249 1.3E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS09480 6a1462915b9a2abd4556558517414df4 266 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 221 237 1.3E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 PIRSF PIRSF004846 1 258 4.5E-72 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 PANTHER PTHR30632:SF0 8 256 5.2E-64 T 22-04-2016 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 Pfam PF13531 Bacterial extracellular solute-binding protein 33 256 2.7E-51 T 22-04-2016 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 Gene3D G3DSA:3.40.190.10 219 255 6.8E-24 T 22-04-2016 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 Gene3D G3DSA:3.40.190.10 11 119 6.8E-24 T 22-04-2016 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 PANTHER PTHR30632 8 256 5.2E-64 T 22-04-2016 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 Gene3D G3DSA:3.40.190.10 120 215 3.2E-36 T 22-04-2016 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 SUPERFAMILY SSF53850 32 257 7.17E-66 T 22-04-2016 RMET_RS02885 a7756933cd42447d8f8d0bb48d9f4dcf 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 38 254 9.1E-57 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 SUPERFAMILY SSF53335 10 280 7.38E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 Pfam PF05175 Methyltransferase small domain 130 213 3.8E-14 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 7 291 8.0E-121 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 PIRSF PIRSF037167 1 297 9.0E-121 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 Gene3D G3DSA:3.40.50.150 102 280 1.8E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 9 285 6.4E-61 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 PANTHER PTHR18895 1 295 3.1E-108 T 22-04-2016 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 297 49.167 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 201 207 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 PANTHER PTHR18895:SF66 1 295 3.1E-108 T 22-04-2016 RMET_RS07150 1909b28a10fe1169207bdfa7b6ee8e1a 297 Gene3D G3DSA:1.10.8.10 9 100 7.7E-9 T 22-04-2016 RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 PANTHER PTHR21152:SF1 18 384 7.2E-177 T 22-04-2016 RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 20 384 7.6E-147 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 18 386 49.298 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 Gene3D G3DSA:3.90.1150.10 285 384 1.6E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 PIRSF PIRSF000525 15 387 3.5E-148 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 Pfam PF00266 Aminotransferase class-V 20 375 1.6E-52 T 22-04-2016 IPR000192 Aminotransferase class V domain RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 PANTHER PTHR21152 18 384 7.2E-177 T 22-04-2016 RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 Gene3D G3DSA:3.40.640.10 32 284 7.8E-103 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS03595 3dccd207a7ddf06e590e37c54e3ffc63 387 SUPERFAMILY SSF53383 19 384 2.19E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS00860 ef308027145ea27809c336beef3bfc6d 276 PANTHER PTHR20858 4 274 6.0E-122 T 22-04-2016 RMET_RS00860 ef308027145ea27809c336beef3bfc6d 276 SUPERFAMILY SSF53613 5 273 2.49E-77 T 22-04-2016 IPR029056 Ribokinase-like RMET_RS00860 ef308027145ea27809c336beef3bfc6d 276 Pfam PF08543 Phosphomethylpyrimidine kinase 15 267 4.8E-95 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 RMET_RS00860 ef308027145ea27809c336beef3bfc6d 276 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 268 1.9E-95 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RMET_RS00860 ef308027145ea27809c336beef3bfc6d 276 Gene3D G3DSA:3.40.1190.20 6 268 3.4E-102 T 22-04-2016 IPR029056 Ribokinase-like RMET_RS00860 ef308027145ea27809c336beef3bfc6d 276 PANTHER PTHR20858:SF17 4 274 6.0E-122 T 22-04-2016 RMET_RS04570 b0797c543e3a3774138f22d33cdb1986 181 Pfam PF06271 RDD family 21 169 4.3E-21 T 22-04-2016 IPR010432 RDD RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 Gene3D G3DSA:3.40.640.10 55 272 1.8E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 16 371 9.5E-107 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 PANTHER PTHR11751 15 371 1.6E-98 T 22-04-2016 RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 SUPERFAMILY SSF53383 21 373 3.13E-82 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 Pfam PF00155 Aminotransferase class I and II 42 366 5.2E-53 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 230 239 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 Gene3D G3DSA:3.90.1150.10 273 374 2.4E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 373 62.754 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RMET_RS03605 a09aaad87a87257ab9ae1d5f7ff10964 374 PANTHER PTHR11751:SF347 15 371 1.6E-98 T 22-04-2016 RMET_RS17835 047bc4d5f0bfbd17c1d2f58cdfce3d4f 504 PANTHER PTHR35342 2 504 1.8E-275 T 22-04-2016 RMET_RS17835 047bc4d5f0bfbd17c1d2f58cdfce3d4f 504 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 437 2.7E-143 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane RMET_RS17835 047bc4d5f0bfbd17c1d2f58cdfce3d4f 504 PANTHER PTHR35342:SF3 2 504 1.8E-275 T 22-04-2016 RMET_RS03695 dd488a260182d010f75322a629fe8557 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 215 2.8E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03695 dd488a260182d010f75322a629fe8557 217 SUPERFAMILY SSF161098 8 210 4.71E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03695 dd488a260182d010f75322a629fe8557 217 PANTHER PTHR30450:SF1 1 217 5.8E-117 T 22-04-2016 RMET_RS03695 dd488a260182d010f75322a629fe8557 217 Gene3D G3DSA:1.10.3720.10 7 215 8.9E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03695 dd488a260182d010f75322a629fe8557 217 PANTHER PTHR30450 1 217 5.8E-117 T 22-04-2016 RMET_RS00975 fb5165fc52865cc3d290a3f22bef4fe5 1126 Pfam PF05567 Neisseria PilC beta-propeller domain 531 920 5.1E-35 T 22-04-2016 IPR008707 PilC beta-propeller domain RMET_RS00975 fb5165fc52865cc3d290a3f22bef4fe5 1126 Gene3D G3DSA:2.60.120.200 263 264 1.1E-12 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS00975 fb5165fc52865cc3d290a3f22bef4fe5 1126 Gene3D G3DSA:2.60.120.200 309 380 1.1E-12 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS00975 fb5165fc52865cc3d290a3f22bef4fe5 1126 Gene3D G3DSA:2.60.120.200 88 197 1.1E-12 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS00975 fb5165fc52865cc3d290a3f22bef4fe5 1126 SUPERFAMILY SSF49899 322 377 1.48E-17 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS00975 fb5165fc52865cc3d290a3f22bef4fe5 1126 SUPERFAMILY SSF49899 31 48 1.48E-17 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS00975 fb5165fc52865cc3d290a3f22bef4fe5 1126 SUPERFAMILY SSF49899 86 241 1.48E-17 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS02680 7e320c6145ad3a78d5ef4ea223b2ad78 264 Gene3D G3DSA:1.10.260.40 6 87 8.9E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS02680 7e320c6145ad3a78d5ef4ea223b2ad78 264 SUPERFAMILY SSF47413 36 87 7.62E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS02680 7e320c6145ad3a78d5ef4ea223b2ad78 264 Pfam PF13560 Helix-turn-helix domain 13 92 1.4E-17 T 22-04-2016 RMET_RS02680 7e320c6145ad3a78d5ef4ea223b2ad78 264 PANTHER PTHR35010:SF2 1 264 6.3E-83 T 22-04-2016 RMET_RS02680 7e320c6145ad3a78d5ef4ea223b2ad78 264 SMART SM00530 17 89 5.4E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS02680 7e320c6145ad3a78d5ef4ea223b2ad78 264 PANTHER PTHR35010 1 264 6.3E-83 T 22-04-2016 RMET_RS05900 695c6b1e64eb74ac46aa0ec2c12de5b3 366 Pfam PF05598 Transposase domain (DUF772) 56 130 1.5E-21 T 22-04-2016 IPR008490 Transposase InsH, N-terminal RMET_RS05900 695c6b1e64eb74ac46aa0ec2c12de5b3 366 Pfam PF01609 Transposase DDE domain 160 352 1.4E-11 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RMET_RS16860 695c6b1e64eb74ac46aa0ec2c12de5b3 366 Pfam PF05598 Transposase domain (DUF772) 56 130 1.5E-21 T 22-04-2016 IPR008490 Transposase InsH, N-terminal RMET_RS16860 695c6b1e64eb74ac46aa0ec2c12de5b3 366 Pfam PF01609 Transposase DDE domain 160 352 1.4E-11 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 Gene3D G3DSA:3.40.50.720 2 143 3.9E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 PIRSF PIRSF000161 3 268 8.2E-40 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 265 4.0E-16 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 SUPERFAMILY SSF51735 4 153 7.89E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 128 4.5E-17 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 PANTHER PTHR20836 1 265 8.8E-45 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 266 8.4E-41 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 Gene3D G3DSA:3.30.360.10 144 234 7.9E-20 T 22-04-2016 RMET_RS16095 70e2687a46261305f56f85d71b6f9b9a 269 SUPERFAMILY SSF55347 129 236 4.58E-35 T 22-04-2016 RMET_RS20965 2e0dbfc2d15dc6e548985425805d5181 344 PANTHER PTHR30462:SF2 2 340 4.1E-73 T 22-04-2016 RMET_RS20965 2e0dbfc2d15dc6e548985425805d5181 344 Pfam PF02470 MlaD protein 79 139 6.1E-10 T 22-04-2016 IPR003399 Mce/MlaD RMET_RS20965 2e0dbfc2d15dc6e548985425805d5181 344 Pfam PF02470 MlaD protein 212 310 2.1E-17 T 22-04-2016 IPR003399 Mce/MlaD RMET_RS20965 2e0dbfc2d15dc6e548985425805d5181 344 PANTHER PTHR30462 2 340 4.1E-73 T 22-04-2016 RMET_RS13360 44a7ff881650bc250352f01a8438855c 202 Gene3D G3DSA:3.30.70.270 43 201 2.0E-55 T 22-04-2016 RMET_RS13360 44a7ff881650bc250352f01a8438855c 202 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 39 201 4.8E-42 T 22-04-2016 IPR000160 GGDEF domain RMET_RS13360 44a7ff881650bc250352f01a8438855c 202 SMART SM00267 30 202 3.7E-54 T 22-04-2016 IPR000160 GGDEF domain RMET_RS13360 44a7ff881650bc250352f01a8438855c 202 Pfam PF00990 Diguanylate cyclase, GGDEF domain 41 198 2.4E-44 T 22-04-2016 IPR000160 GGDEF domain RMET_RS13360 44a7ff881650bc250352f01a8438855c 202 PANTHER PTHR10799:SF750 75 199 1.6E-26 T 22-04-2016 RMET_RS13360 44a7ff881650bc250352f01a8438855c 202 PANTHER PTHR10799 75 199 1.6E-26 T 22-04-2016 RMET_RS13360 44a7ff881650bc250352f01a8438855c 202 SUPERFAMILY SSF55073 46 200 5.57E-48 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS06550 46ddf855188845697ae12f04217065bc 243 Pfam PF05199 GMC oxidoreductase 97 235 4.0E-38 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RMET_RS06550 46ddf855188845697ae12f04217065bc 243 SUPERFAMILY SSF54373 1 183 4.61E-58 T 22-04-2016 RMET_RS06550 46ddf855188845697ae12f04217065bc 243 PANTHER PTHR11552 1 240 1.2E-80 T 22-04-2016 RMET_RS06550 46ddf855188845697ae12f04217065bc 243 SUPERFAMILY SSF51905 179 241 5.4E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS06550 46ddf855188845697ae12f04217065bc 243 Gene3D G3DSA:3.50.50.60 183 226 9.9E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS06550 46ddf855188845697ae12f04217065bc 243 PANTHER PTHR11552:SF51 1 240 1.2E-80 T 22-04-2016 RMET_RS06550 46ddf855188845697ae12f04217065bc 243 Gene3D G3DSA:3.30.560.10 1 182 2.0E-49 T 22-04-2016 RMET_RS06550 46ddf855188845697ae12f04217065bc 243 Gene3D G3DSA:3.30.560.10 227 234 2.0E-49 T 22-04-2016 RMET_RS21150 abf26bbb57244ecffc6d143b1ecb90e1 137 Pfam PF00682 HMGL-like 1 135 1.3E-21 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RMET_RS21150 abf26bbb57244ecffc6d143b1ecb90e1 137 PANTHER PTHR10277 1 137 6.5E-79 T 22-04-2016 RMET_RS21150 abf26bbb57244ecffc6d143b1ecb90e1 137 Gene3D G3DSA:3.20.20.70 1 137 5.7E-35 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS21150 abf26bbb57244ecffc6d143b1ecb90e1 137 PANTHER PTHR10277:SF40 1 137 6.5E-79 T 22-04-2016 RMET_RS21150 abf26bbb57244ecffc6d143b1ecb90e1 137 SUPERFAMILY SSF51569 1 136 1.44E-27 T 22-04-2016 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 PRINTS PR00395 Ribosomal protein S2 signature 157 174 1.6E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 PRINTS PR00395 Ribosomal protein S2 signature 174 185 1.6E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 PRINTS PR00395 Ribosomal protein S2 signature 195 209 1.6E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 PRINTS PR00395 Ribosomal protein S2 signature 5 23 1.6E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 PRINTS PR00395 Ribosomal protein S2 signature 36 45 1.6E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 PRINTS PR00395 Ribosomal protein S2 signature 86 103 1.6E-34 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 Gene3D G3DSA:1.10.287.610 99 151 5.4E-23 T 22-04-2016 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 4.5E-99 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 40.041 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 Pfam PF00318 Ribosomal protein S2 8 223 1.2E-91 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 PANTHER PTHR12534 3 229 4.4E-108 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 SUPERFAMILY SSF52313 5 231 5.76E-91 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 Gene3D G3DSA:3.40.50.10490 157 241 6.6E-61 T 22-04-2016 RMET_RS07230 0281929484be1745522df2fd99a3ad14 247 Gene3D G3DSA:3.40.50.10490 22 98 6.6E-61 T 22-04-2016 RMET_RS14675 e2b44d2758483c31e3c9ba1a1bba1283 367 SUPERFAMILY SSF56176 6 176 1.84E-33 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS14675 e2b44d2758483c31e3c9ba1a1bba1283 367 Pfam PF01565 FAD binding domain 5 138 2.0E-22 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS14675 e2b44d2758483c31e3c9ba1a1bba1283 367 SUPERFAMILY SSF55103 180 365 2.94E-19 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS14675 e2b44d2758483c31e3c9ba1a1bba1283 367 PANTHER PTHR11748 12 363 1.3E-78 T 22-04-2016 RMET_RS14675 e2b44d2758483c31e3c9ba1a1bba1283 367 PANTHER PTHR11748:SF1 12 363 1.3E-78 T 22-04-2016 RMET_RS14675 e2b44d2758483c31e3c9ba1a1bba1283 367 Gene3D G3DSA:3.30.465.10 50 176 8.3E-20 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS14675 e2b44d2758483c31e3c9ba1a1bba1283 367 Gene3D G3DSA:1.10.45.10 343 363 9.3E-5 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 PIRSF PIRSF001604 13 719 1.9E-244 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SUPERFAMILY SSF56091 20 118 4.16E-113 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SUPERFAMILY SSF56091 152 364 4.16E-113 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Gene3D G3DSA:1.10.150.20 552 632 3.1E-34 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SUPERFAMILY SSF50249 366 448 5.82E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SUPERFAMILY SSF47781 451 632 1.56E-64 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Pfam PF12826 Helix-hairpin-helix motif 558 621 1.5E-24 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 PANTHER PTHR23389 21 118 1.3E-197 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 PANTHER PTHR23389 152 581 1.3E-197 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SMART SM00278 560 579 140.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SMART SM00278 592 611 9.8 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SMART SM00278 528 547 540.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SMART SM00278 494 513 49.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Gene3D G3DSA:1.10.150.20 483 551 5.4E-28 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Gene3D G3DSA:2.40.50.140 368 439 1.4E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 PANTHER PTHR23389:SF9 21 118 1.3E-197 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 PANTHER PTHR23389:SF9 152 581 1.3E-197 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 369 446 4.9E-36 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 455 482 4.5E-12 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Pfam PF14520 Helix-hairpin-helix domain 496 548 4.8E-4 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 27 710 2.7E-255 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Gene3D G3DSA:1.10.287.610 18 83 5.9E-30 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 641 715 3.2E-13 T 22-04-2016 IPR001357 BRCT domain RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SUPERFAMILY SSF52113 642 716 5.42E-19 T 22-04-2016 IPR001357 BRCT domain RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 164 193 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 379 394 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Gene3D G3DSA:3.30.470.30 168 300 1.3E-53 T 22-04-2016 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 151 366 6.1E-85 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 22 122 4.5E-34 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Gene3D G3DSA:3.40.50.10190 642 717 9.6E-26 T 22-04-2016 IPR001357 BRCT domain RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SMART SM00292 641 718 2.7E-15 T 22-04-2016 IPR001357 BRCT domain RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 Hamap MF_01588 DNA ligase [ligA]. 18 715 54.998 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RMET_RS07195 4383f8cf04ec568e7d6ddc756d5c02d5 721 SMART SM00532 19 496 6.4E-259 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RMET_RS11195 14a3b1c1830fbbe0e9b52241ebef37cc 102 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 4 101 1.8E-35 T 22-04-2016 IPR018678 Protein of unknown function DUF2160, transmembrane RMET_RS08245 79c1232c7f9b56a75c94c989f9cdafa7 367 Pfam PF13609 Gram-negative porin 10 323 2.2E-49 T 22-04-2016 RMET_RS08245 79c1232c7f9b56a75c94c989f9cdafa7 367 Gene3D G3DSA:2.40.160.10 26 367 1.4E-89 T 22-04-2016 IPR023614 Porin domain RMET_RS08245 79c1232c7f9b56a75c94c989f9cdafa7 367 SUPERFAMILY SSF56935 25 367 4.45E-80 T 22-04-2016 RMET_RS18015 3960d0d2abe605f7578308a14537bf06 371 SUPERFAMILY SSF53850 44 366 8.98E-48 T 22-04-2016 RMET_RS18015 3960d0d2abe605f7578308a14537bf06 371 Gene3D G3DSA:3.40.190.10 291 366 2.4E-53 T 22-04-2016 RMET_RS18015 3960d0d2abe605f7578308a14537bf06 371 Gene3D G3DSA:3.40.190.10 12 149 2.4E-53 T 22-04-2016 RMET_RS18015 3960d0d2abe605f7578308a14537bf06 371 Pfam PF13531 Bacterial extracellular solute-binding protein 45 310 1.6E-15 T 22-04-2016 RMET_RS18015 3960d0d2abe605f7578308a14537bf06 371 PANTHER PTHR30006 21 369 5.3E-71 T 22-04-2016 RMET_RS18015 3960d0d2abe605f7578308a14537bf06 371 Gene3D G3DSA:3.40.190.10 150 290 1.5E-57 T 22-04-2016 RMET_RS18015 3960d0d2abe605f7578308a14537bf06 371 PANTHER PTHR30006:SF10 21 369 5.3E-71 T 22-04-2016 RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 Pfam PF03466 LysR substrate binding domain 87 292 1.8E-45 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 Gene3D G3DSA:1.10.10.10 3 82 4.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 SUPERFAMILY SSF46785 3 112 4.46E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 PANTHER PTHR30537 1 310 4.4E-107 T 22-04-2016 RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 Gene3D G3DSA:3.40.190.10 178 261 8.2E-22 T 22-04-2016 RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 SUPERFAMILY SSF53850 89 298 6.52E-46 T 22-04-2016 RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 Gene3D G3DSA:3.40.190.10 92 177 4.2E-19 T 22-04-2016 RMET_RS17935 a1017b1ef9b8ed91f7baffad89067248 310 PANTHER PTHR30537:SF5 1 310 4.4E-107 T 22-04-2016 RMET_RS02710 a421c4d9df4c9d807fbb5891998b4cf7 143 PANTHER PTHR30558:SF5 1 137 3.0E-25 T 22-04-2016 RMET_RS02710 a421c4d9df4c9d807fbb5891998b4cf7 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 138 2.0E-27 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RMET_RS02710 a421c4d9df4c9d807fbb5891998b4cf7 143 PANTHER PTHR30558 1 137 3.0E-25 T 22-04-2016 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 568 653 1.0E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 Gene3D G3DSA:3.30.450.40 274 451 1.9E-18 T 22-04-2016 IPR029016 GAF domain-like RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 SUPERFAMILY SSF158472 212 262 2.09E-8 T 22-04-2016 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 PIRSF PIRSF003167 18 663 3.7E-196 T 22-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 56 160 6.9E-26 T 22-04-2016 IPR029095 NarX-like, N-terminal RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 Pfam PF13185 GAF domain 297 439 4.3E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 Gene3D G3DSA:3.30.565.10 524 655 2.6E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 SUPERFAMILY SSF55874 522 653 4.06E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 SUPERFAMILY SSF55781 299 451 3.71E-15 T 22-04-2016 IPR029016 GAF domain-like RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 PANTHER PTHR24421 450 668 3.7E-53 T 22-04-2016 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 PANTHER PTHR24421 6 324 3.7E-53 T 22-04-2016 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 PANTHER PTHR24421:SF25 450 668 3.7E-53 T 22-04-2016 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 PANTHER PTHR24421:SF25 6 324 3.7E-53 T 22-04-2016 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 SMART SM00304 211 263 3.1E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 SMART SM00387 560 655 6.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 Pfam PF00672 HAMP domain 195 260 1.2E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 SMART SM00065 298 448 1.9E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 RMET_RS10440 4c695a79ce2a7dfba6c889662434a335 671 Pfam PF07730 Histidine kinase 455 521 2.7E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 SMART SM00422 1 70 5.9E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.1E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.1E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.1E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 PANTHER PTHR30204 1 130 7.1E-32 T 22-04-2016 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 Gene3D G3DSA:1.10.1660.10 1 54 2.9E-24 T 22-04-2016 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 PANTHER PTHR30204:SF18 1 130 7.1E-32 T 22-04-2016 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 Pfam PF13411 MerR HTH family regulatory protein 1 68 4.3E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 SUPERFAMILY SSF46955 1 118 1.03E-33 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS17365 2af6c65ec66b10c585672f0b6a84697d 144 Gene3D G3DSA:1.10.1660.10 55 135 1.6E-21 T 22-04-2016 RMET_RS03980 86d563e3901920d2fe153c4a44386191 380 PANTHER PTHR34296:SF1 2 371 3.2E-130 T 22-04-2016 RMET_RS03980 86d563e3901920d2fe153c4a44386191 380 PANTHER PTHR34296 2 371 3.2E-130 T 22-04-2016 RMET_RS03980 86d563e3901920d2fe153c4a44386191 380 Gene3D G3DSA:3.40.50.2300 203 264 1.2E-4 T 22-04-2016 RMET_RS03980 86d563e3901920d2fe153c4a44386191 380 SUPERFAMILY SSF53822 202 292 8.72E-5 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS03980 86d563e3901920d2fe153c4a44386191 380 Pfam PF02608 Basic membrane protein 50 334 1.4E-62 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 RMET_RS03980 86d563e3901920d2fe153c4a44386191 380 Gene3D G3DSA:3.40.50.2300 46 186 1.6E-46 T 22-04-2016 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 333 346 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 Pfam PF01494 FAD binding domain 17 377 2.1E-26 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 334 7.8E-22 T 22-04-2016 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 350 7.8E-22 T 22-04-2016 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 18 40 7.8E-22 T 22-04-2016 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 7.8E-22 T 22-04-2016 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 PANTHER PTHR13789 1 428 9.4E-79 T 22-04-2016 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 PANTHER PTHR13789:SF214 1 428 9.4E-79 T 22-04-2016 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 SUPERFAMILY SSF51905 17 199 4.98E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 SUPERFAMILY SSF51905 306 422 4.98E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 Gene3D G3DSA:3.50.50.60 125 204 1.2E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 Gene3D G3DSA:3.50.50.60 16 90 1.2E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 Gene3D G3DSA:3.50.50.60 307 394 1.2E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16000 9bb3eb9496ff0541f39282605b50d3d0 428 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 19 428 7.8E-118 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RMET_RS12900 e81bfcae8ff56531aeacc0d05a081680 232 Pfam PF03741 Integral membrane protein TerC family 18 187 3.2E-43 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RMET_RS12900 e81bfcae8ff56531aeacc0d05a081680 232 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 15 188 2.5E-68 T 22-04-2016 IPR022301 Integral membrane protein YjbE RMET_RS12900 e81bfcae8ff56531aeacc0d05a081680 232 PANTHER PTHR30060 1 227 3.0E-43 T 22-04-2016 RMET_RS13000 fa566486ce986ee0209050655d9c0445 202 PANTHER PTHR11260 1 199 5.0E-60 T 22-04-2016 RMET_RS13000 fa566486ce986ee0209050655d9c0445 202 SUPERFAMILY SSF52833 1 86 2.61E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13000 fa566486ce986ee0209050655d9c0445 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 1.3E-20 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS13000 fa566486ce986ee0209050655d9c0445 202 Gene3D G3DSA:3.40.30.10 1 73 6.5E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13000 fa566486ce986ee0209050655d9c0445 202 PANTHER PTHR11260:SF325 1 199 5.0E-60 T 22-04-2016 RMET_RS01380 5ef23a3c2e9d3dcbc514bb73ff68cebe 204 PANTHER PTHR12151 47 203 3.3E-54 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC RMET_RS01380 5ef23a3c2e9d3dcbc514bb73ff68cebe 204 Gene3D G3DSA:3.40.30.10 17 203 5.5E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01380 5ef23a3c2e9d3dcbc514bb73ff68cebe 204 Pfam PF02630 SCO1/SenC 43 182 8.0E-37 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC RMET_RS01380 5ef23a3c2e9d3dcbc514bb73ff68cebe 204 SUPERFAMILY SSF52833 45 203 1.05E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 5.2E-234 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PIRSF PIRSF001535 1 573 1.7E-273 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 SUPERFAMILY SSF55681 10 237 3.69E-105 T 22-04-2016 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 SUPERFAMILY SSF55681 408 479 3.69E-105 T 22-04-2016 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 SUPERFAMILY SSF52954 465 571 2.45E-30 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PANTHER PTHR11451:SF3 400 571 5.7E-150 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PANTHER PTHR11451:SF3 4 244 5.7E-150 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 572 41.359 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 Pfam PF03129 Anticodon binding domain 477 568 3.0E-17 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 Gene3D G3DSA:3.30.930.10 390 472 1.1E-106 T 22-04-2016 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 Gene3D G3DSA:3.30.930.10 10 234 1.1E-106 T 22-04-2016 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.2E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.2E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.2E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.2E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 460 1.0E-47 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 SUPERFAMILY SSF55826 218 391 2.35E-37 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 Gene3D G3DSA:3.90.960.10 241 389 1.4E-33 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 Gene3D G3DSA:3.40.50.800 473 571 1.1E-29 T 22-04-2016 IPR004154 Anticodon-binding RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PANTHER PTHR11451 400 571 5.7E-150 T 22-04-2016 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 PANTHER PTHR11451 4 244 5.7E-150 T 22-04-2016 RMET_RS15520 2985a4cae0fd80596eab4661c39ba006 573 Pfam PF04073 Aminoacyl-tRNA editing domain 257 380 2.9E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 Gene3D G3DSA:3.40.50.980 4 168 1.6E-37 T 22-04-2016 RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 Pfam PF00501 AMP-binding enzyme 8 420 1.3E-104 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 PANTHER PTHR24096 3 515 6.0E-169 T 22-04-2016 RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 Gene3D G3DSA:3.40.50.980 169 326 3.6E-38 T 22-04-2016 RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 SUPERFAMILY SSF56801 3 515 1.7E-155 T 22-04-2016 RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 Gene3D G3DSA:2.30.38.10 339 411 2.7E-30 T 22-04-2016 RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 Gene3D G3DSA:3.30.300.30 415 514 2.7E-34 T 22-04-2016 RMET_RS12660 8d2ebeb267b828b47d3647fc6b21798a 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 504 1.7E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 1.3E-4 T 22-04-2016 RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 Pfam PF00106 short chain dehydrogenase 5 197 9.6E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PANTHER PTHR24322 153 185 2.3E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PANTHER PTHR24322 8 137 2.3E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 SUPERFAMILY SSF51735 4 245 1.93E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 Gene3D G3DSA:3.40.50.720 2 245 1.1E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PANTHER PTHR24322:SF328 153 185 2.3E-54 T 22-04-2016 RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 PANTHER PTHR24322:SF328 8 137 2.3E-54 T 22-04-2016 RMET_RS06845 97bfa2809679d41f7b3418df83e88cc9 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 4.8E-124 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 RMET_RS30155 bc1c6c341c3e29c53b42e8ceeda7fce5 70 Pfam PF12091 Protein of unknown function (DUF3567) 1 70 6.9E-27 T 22-04-2016 IPR021951 Protein of unknown function DUF3567 RMET_RS03210 da848cf4b6eed8451b7ac563400e30dc 362 PANTHER PTHR35564:SF3 2 321 6.3E-56 T 22-04-2016 RMET_RS03210 da848cf4b6eed8451b7ac563400e30dc 362 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 17 321 2.0E-74 T 22-04-2016 IPR010732 Type VI secretion, TssG-like RMET_RS03210 da848cf4b6eed8451b7ac563400e30dc 362 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 17 321 4.4E-73 T 22-04-2016 IPR010732 Type VI secretion, TssG-like RMET_RS03210 da848cf4b6eed8451b7ac563400e30dc 362 PANTHER PTHR35564 2 321 6.3E-56 T 22-04-2016 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 8.0E-40 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 SUPERFAMILY SSF51344 3 85 1.27E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 9.5E-8 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 Gene3D G3DSA:2.60.15.10 1 88 1.9E-31 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 PANTHER PTHR13822 1 136 4.3E-41 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.489 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 Gene3D G3DSA:1.20.5.440 90 131 5.2E-14 T 22-04-2016 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 83 1.7E-30 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 2.0E-43 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RMET_RS17555 d1d930238b5255f1703cde85e67026d8 138 SUPERFAMILY SSF46604 88 135 4.97E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 8.8E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 8.8E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 8.8E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 187 0.0035 T 22-04-2016 RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 6.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 6.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 6.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 6.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 6.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 6.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 Gene3D G3DSA:3.40.50.720 4 258 4.5E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 258 2.4E-53 T 22-04-2016 RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 SUPERFAMILY SSF51735 7 259 1.23E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PANTHER PTHR24322 17 146 1.8E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09265 a33a095683d22c812ae9da5a00f08873 260 PANTHER PTHR24322 166 198 1.8E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00560 9b204766f8324ea1496a020e811d3cdf 219 SUPERFAMILY SSF52833 4 201 2.46E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS00560 9b204766f8324ea1496a020e811d3cdf 219 Gene3D G3DSA:3.40.30.10 2 197 4.3E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS00560 9b204766f8324ea1496a020e811d3cdf 219 PIRSF PIRSF006386 1 208 5.0E-56 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RMET_RS00560 9b204766f8324ea1496a020e811d3cdf 219 PANTHER PTHR13887 1 199 6.3E-36 T 22-04-2016 RMET_RS00560 9b204766f8324ea1496a020e811d3cdf 219 PANTHER PTHR13887:SF22 1 199 6.3E-36 T 22-04-2016 RMET_RS00560 9b204766f8324ea1496a020e811d3cdf 219 Pfam PF01323 DSBA-like thioredoxin domain 5 196 1.9E-32 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RMET_RS03990 8833b4bdb7cb73214b3422273e92c5a2 364 Pfam PF02653 Branched-chain amino acid transport system / permease component 67 347 2.2E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS03990 8833b4bdb7cb73214b3422273e92c5a2 364 PANTHER PTHR32196 6 362 4.5E-63 T 22-04-2016 RMET_RS03990 8833b4bdb7cb73214b3422273e92c5a2 364 PANTHER PTHR32196:SF22 6 362 4.5E-63 T 22-04-2016 RMET_RS00085 243147a0831f4ae0a22e2540e26d306d 316 Gene3D G3DSA:3.20.20.410 8 273 4.6E-73 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS00085 243147a0831f4ae0a22e2540e26d306d 316 PANTHER PTHR30348 246 273 1.2E-109 T 22-04-2016 RMET_RS00085 243147a0831f4ae0a22e2540e26d306d 316 PANTHER PTHR30348 8 227 1.2E-109 T 22-04-2016 RMET_RS00085 243147a0831f4ae0a22e2540e26d306d 316 SUPERFAMILY SSF117396 12 273 7.06E-68 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS00085 243147a0831f4ae0a22e2540e26d306d 316 PANTHER PTHR30348:SF7 246 273 1.2E-109 T 22-04-2016 RMET_RS00085 243147a0831f4ae0a22e2540e26d306d 316 PANTHER PTHR30348:SF7 8 227 1.2E-109 T 22-04-2016 RMET_RS00085 243147a0831f4ae0a22e2540e26d306d 316 Pfam PF01904 Protein of unknown function DUF72 30 270 8.3E-55 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 PRINTS PR00607 Class IE cytochrome C signature 226 237 3.2E-11 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 PRINTS PR00607 Class IE cytochrome C signature 237 247 3.2E-11 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 PRINTS PR00607 Class IE cytochrome C signature 279 290 3.2E-11 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 PRINTS PR00607 Class IE cytochrome C signature 265 277 3.2E-11 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 SUPERFAMILY SSF46626 71 165 3.95E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 Gene3D G3DSA:1.10.760.10 81 159 1.5E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 Gene3D G3DSA:1.10.760.10 215 291 9.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 215 289 9.5E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 81 157 6.0E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 SUPERFAMILY SSF46626 208 291 5.24E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17455 82af09fcfd93db20e6fbdfa08b56dede 294 PANTHER PTHR40942 144 294 2.5E-21 T 22-04-2016 RMET_RS07970 241467b378eac551904c7e4cd56a347d 397 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 397 1.1E-230 T 22-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 RMET_RS07970 241467b378eac551904c7e4cd56a347d 397 Gene3D G3DSA:3.10.310.10 198 376 2.7E-80 T 22-04-2016 RMET_RS07970 241467b378eac551904c7e4cd56a347d 397 Gene3D G3DSA:3.10.310.10 2 197 1.1E-91 T 22-04-2016 RMET_RS07970 241467b378eac551904c7e4cd56a347d 397 SUPERFAMILY SSF54506 2 182 4.08E-71 T 22-04-2016 RMET_RS07970 241467b378eac551904c7e4cd56a347d 397 Pfam PF04303 PrpF protein 6 393 6.7E-178 T 22-04-2016 IPR007400 PrpF protein RMET_RS07970 241467b378eac551904c7e4cd56a347d 397 PANTHER PTHR30349 1 382 7.1E-133 T 22-04-2016 RMET_RS07970 241467b378eac551904c7e4cd56a347d 397 PANTHER PTHR30349:SF21 1 382 7.1E-133 T 22-04-2016 RMET_RS07970 241467b378eac551904c7e4cd56a347d 397 SUPERFAMILY SSF54506 191 395 7.69E-77 T 22-04-2016 RMET_RS06920 ae7becd5ebaac20491f2ed644bcc0637 291 PANTHER PTHR24220 41 271 3.1E-113 T 22-04-2016 RMET_RS06920 ae7becd5ebaac20491f2ed644bcc0637 291 Pfam PF00005 ABC transporter 55 187 7.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS06920 ae7becd5ebaac20491f2ed644bcc0637 291 SUPERFAMILY SSF52540 40 265 6.01E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06920 ae7becd5ebaac20491f2ed644bcc0637 291 Gene3D G3DSA:3.40.50.300 38 243 6.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06920 ae7becd5ebaac20491f2ed644bcc0637 291 SMART SM00382 64 237 5.3E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06920 ae7becd5ebaac20491f2ed644bcc0637 291 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS06920 ae7becd5ebaac20491f2ed644bcc0637 291 PANTHER PTHR24220:SF365 41 271 3.1E-113 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 PANTHER PTHR22939:SF73 497 588 2.4E-13 T 22-04-2016 RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 Pfam PF13180 PDZ domain 501 578 6.0E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 Gene3D G3DSA:2.30.42.10 487 584 1.1E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 SUPERFAMILY SSF55486 251 437 5.13E-8 T 22-04-2016 RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 PANTHER PTHR22939 497 588 2.4E-13 T 22-04-2016 RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 PIRSF PIRSF016493 1 603 2.1E-207 T 22-04-2016 IPR024191 Peptidase M61 RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 Pfam PF05299 M61 glycyl aminopeptidase 288 404 3.4E-47 T 22-04-2016 IPR007963 Peptidase M61, catalytic domain RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 SUPERFAMILY SSF50156 495 589 1.12E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS15985 23f29f07d72da6db314c70e660eb26b8 604 SMART SM00228 500 569 0.0017 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS14415 2da71b63d87cffd382cf8e5acec59ee9 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 166 187 4.5E-6 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RMET_RS14415 2da71b63d87cffd382cf8e5acec59ee9 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 41 61 4.5E-6 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RMET_RS14415 2da71b63d87cffd382cf8e5acec59ee9 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 209 223 4.5E-6 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RMET_RS14415 2da71b63d87cffd382cf8e5acec59ee9 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 78 107 4.5E-6 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RMET_RS14415 2da71b63d87cffd382cf8e5acec59ee9 396 PANTHER PTHR11351:SF33 17 382 1.6E-134 T 22-04-2016 RMET_RS14415 2da71b63d87cffd382cf8e5acec59ee9 396 Pfam PF01610 Transposase 273 395 2.4E-7 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RMET_RS14415 2da71b63d87cffd382cf8e5acec59ee9 396 PANTHER PTHR11351 17 382 1.6E-134 T 22-04-2016 RMET_RS14415 2da71b63d87cffd382cf8e5acec59ee9 396 Pfam PF00487 Fatty acid desaturase 18 241 2.1E-16 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RMET_RS12220 74a5199cdf10a785213cf0b38fec4bb8 387 Gene3D G3DSA:3.90.226.10 275 361 3.3E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS12220 74a5199cdf10a785213cf0b38fec4bb8 387 Gene3D G3DSA:3.90.226.10 109 237 3.3E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS12220 74a5199cdf10a785213cf0b38fec4bb8 387 Pfam PF01343 Peptidase family S49 201 344 2.0E-32 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RMET_RS12220 74a5199cdf10a785213cf0b38fec4bb8 387 PANTHER PTHR30341:SF1 82 377 5.7E-90 T 22-04-2016 RMET_RS12220 74a5199cdf10a785213cf0b38fec4bb8 387 PANTHER PTHR30341 82 377 5.7E-90 T 22-04-2016 RMET_RS12220 74a5199cdf10a785213cf0b38fec4bb8 387 SUPERFAMILY SSF52096 274 335 5.27E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS12220 74a5199cdf10a785213cf0b38fec4bb8 387 SUPERFAMILY SSF52096 128 245 5.27E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 Pfam PF00501 AMP-binding enzyme 50 452 4.9E-78 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 Gene3D G3DSA:3.40.50.980 217 365 1.1E-34 T 22-04-2016 RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 Gene3D G3DSA:3.30.300.30 447 549 4.2E-30 T 22-04-2016 RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 Gene3D G3DSA:3.40.50.980 44 216 2.9E-34 T 22-04-2016 RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 PANTHER PTHR24095 27 551 7.2E-147 T 22-04-2016 RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 Gene3D G3DSA:2.30.38.10 371 442 5.3E-17 T 22-04-2016 RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 SUPERFAMILY SSF56801 29 551 3.01E-136 T 22-04-2016 RMET_RS11035 3f8a5f4c910057704bf5a28534fb373c 553 Pfam PF13193 AMP-binding enzyme C-terminal domain 461 539 5.1E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 SUPERFAMILY SSF51230 2 96 4.71E-25 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 PANTHER PTHR23151 3 419 1.9E-215 T 22-04-2016 RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 Gene3D G3DSA:3.30.559.10 186 417 6.1E-91 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 Pfam PF02817 e3 binding domain 116 150 8.4E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 PANTHER PTHR23151:SF47 3 419 1.9E-215 T 22-04-2016 RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 SUPERFAMILY SSF52777 189 418 3.38E-88 T 22-04-2016 RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 Gene3D G3DSA:2.40.50.100 2 96 8.5E-27 T 22-04-2016 RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 189 417 2.0E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 418 2.7E-168 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 SUPERFAMILY SSF47005 112 152 1.15E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 Pfam PF00364 Biotin-requiring enzyme 5 77 2.1E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RMET_RS10250 9f9b3caaf55cc9c8e45621e0c1c3d969 419 Gene3D G3DSA:4.10.320.10 115 159 1.0E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RMET_RS06770 ed4b4113b768b4cd487f4c34a61a34e7 90 PIRSF PIRSF017854 5 90 9.3E-36 T 22-04-2016 IPR016704 Conjugal transfer, TrbD RMET_RS06770 ed4b4113b768b4cd487f4c34a61a34e7 90 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 86 7.0E-5 T 22-04-2016 RMET_RS06770 ed4b4113b768b4cd487f4c34a61a34e7 90 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 85 1.9E-10 T 22-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RMET_RS16115 f93724f1a8c075b2c85e6adc12567f2e 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 318 1.8E-79 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS16115 f93724f1a8c075b2c85e6adc12567f2e 323 PANTHER PTHR30349:SF1 1 285 1.5E-82 T 22-04-2016 RMET_RS16115 f93724f1a8c075b2c85e6adc12567f2e 323 PIRSF PIRSF017082 1 322 6.7E-77 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS16115 f93724f1a8c075b2c85e6adc12567f2e 323 SUPERFAMILY SSF53850 117 272 2.17E-8 T 22-04-2016 RMET_RS16115 f93724f1a8c075b2c85e6adc12567f2e 323 PANTHER PTHR30349 1 285 1.5E-82 T 22-04-2016 RMET_RS07725 0bbe9799d7a789b218b1fd044f80a3a4 113 PIRSF PIRSF004761 1 113 1.6E-39 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RMET_RS07725 0bbe9799d7a789b218b1fd044f80a3a4 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 4.6E-34 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RMET_RS07725 0bbe9799d7a789b218b1fd044f80a3a4 113 PANTHER PTHR34535:SF2 2 112 5.0E-46 T 22-04-2016 RMET_RS07725 0bbe9799d7a789b218b1fd044f80a3a4 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 25.382 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RMET_RS07725 0bbe9799d7a789b218b1fd044f80a3a4 113 PANTHER PTHR34535 2 112 5.0E-46 T 22-04-2016 RMET_RS07725 0bbe9799d7a789b218b1fd044f80a3a4 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 22-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site RMET_RS07725 0bbe9799d7a789b218b1fd044f80a3a4 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 112 1.8E-34 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RMET_RS09920 6e6e91f6f14ee44afd08ef85ba8fd285 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.314 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS09920 6e6e91f6f14ee44afd08ef85ba8fd285 124 Pfam PF01250 Ribosomal protein S6 3 90 1.0E-26 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS09920 6e6e91f6f14ee44afd08ef85ba8fd285 124 PANTHER PTHR21011:SF1 1 120 4.7E-35 T 22-04-2016 RMET_RS09920 6e6e91f6f14ee44afd08ef85ba8fd285 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.2E-32 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS09920 6e6e91f6f14ee44afd08ef85ba8fd285 124 SUPERFAMILY SSF54995 1 104 6.67E-36 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RMET_RS09920 6e6e91f6f14ee44afd08ef85ba8fd285 124 PANTHER PTHR21011 1 120 4.7E-35 T 22-04-2016 RMET_RS09920 6e6e91f6f14ee44afd08ef85ba8fd285 124 Gene3D G3DSA:3.30.70.60 1 104 3.4E-41 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RMET_RS09040 6cfd613a02ed8f0462eb349b9c640be1 332 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 19 299 1.0E-13 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RMET_RS09040 6cfd613a02ed8f0462eb349b9c640be1 332 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 11 305 5.0E-35 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RMET_RS09040 6cfd613a02ed8f0462eb349b9c640be1 332 TIGRFAM TIGR03476 HpnL: putative membrane protein 4 316 4.5E-104 T 22-04-2016 RMET_RS00715 dcf8d8d995ef7c4677660fe5d1b5816b 305 Gene3D G3DSA:3.40.1160.10 36 303 1.8E-102 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS00715 dcf8d8d995ef7c4677660fe5d1b5816b 305 Pfam PF00696 Amino acid kinase family 38 281 2.6E-45 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS00715 dcf8d8d995ef7c4677660fe5d1b5816b 305 PANTHER PTHR23342 15 303 1.4E-111 T 22-04-2016 RMET_RS00715 dcf8d8d995ef7c4677660fe5d1b5816b 305 TIGRFAM TIGR00761 argB: acetylglutamate kinase 39 279 6.3E-75 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS00715 dcf8d8d995ef7c4677660fe5d1b5816b 305 SUPERFAMILY SSF53633 21 304 3.27E-89 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS00715 dcf8d8d995ef7c4677660fe5d1b5816b 305 Hamap MF_00082_A Acetylglutamate kinase [argB]. 39 289 28.909 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS00715 dcf8d8d995ef7c4677660fe5d1b5816b 305 Hamap MF_00082_B Acetylglutamate kinase [argB]. 36 304 35.72 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS00715 dcf8d8d995ef7c4677660fe5d1b5816b 305 PIRSF PIRSF000728 19 304 5.1E-103 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 SUPERFAMILY SSF82714 181 269 9.29E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 Gene3D G3DSA:3.30.2090.10 180 274 1.3E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 Gene3D G3DSA:3.30.2090.10 719 807 2.9E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 Gene3D G3DSA:1.20.1640.10 293 499 2.3E-55 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 Gene3D G3DSA:3.30.70.1430 38 139 7.5E-31 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 SUPERFAMILY SSF82693 38 129 2.49E-23 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 SUPERFAMILY SSF82866 295 496 5.75E-48 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PANTHER PTHR32063 1 1024 0.0 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 SUPERFAMILY SSF82714 719 805 6.8E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 Gene3D G3DSA:1.10.3850.10 811 1024 9.4E-56 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 SUPERFAMILY SSF82693 136 181 1.13E-19 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 SUPERFAMILY SSF82693 273 328 1.13E-19 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 Gene3D G3DSA:3.30.70.1430 564 651 2.5E-15 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 616 630 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.6E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 SUPERFAMILY SSF82693 561 652 1.83E-12 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 PANTHER PTHR32063:SF13 1 1024 0.0 T 22-04-2016 RMET_RS05640 74f1a0b0f8854ef7d3cf443aeec0af23 1044 SUPERFAMILY SSF82866 803 1026 2.35E-43 T 22-04-2016 RMET_RS22130 3f39a79e95313b76cc22f383095f174e 336 Pfam PF01957 NfeD-like C-terminal, partner-binding 296 335 1.7E-7 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain RMET_RS22130 3f39a79e95313b76cc22f383095f174e 336 SUPERFAMILY SSF52096 13 195 5.31E-25 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS22130 3f39a79e95313b76cc22f383095f174e 336 PANTHER PTHR33507 15 335 8.1E-119 T 22-04-2016 RMET_RS22130 3f39a79e95313b76cc22f383095f174e 336 PANTHER PTHR33507:SF1 15 335 8.1E-119 T 22-04-2016 RMET_RS22130 3f39a79e95313b76cc22f383095f174e 336 Gene3D G3DSA:3.90.226.10 171 195 3.7E-15 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS22130 3f39a79e95313b76cc22f383095f174e 336 Gene3D G3DSA:3.90.226.10 16 116 3.7E-15 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS14250 ad9492a83973c80ba9f1000d2540a36e 339 PANTHER PTHR10948 1 339 2.3E-86 T 22-04-2016 RMET_RS14250 ad9492a83973c80ba9f1000d2540a36e 339 ProSitePatterns PS01043 Transposases, IS30 family, signature. 273 289 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 RMET_RS14250 ad9492a83973c80ba9f1000d2540a36e 339 Pfam PF00665 Integrase core domain 181 286 1.4E-14 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS14250 ad9492a83973c80ba9f1000d2540a36e 339 Pfam PF13936 Helix-turn-helix domain 5 48 6.5E-17 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RMET_RS14250 ad9492a83973c80ba9f1000d2540a36e 339 Gene3D G3DSA:3.30.420.10 181 326 1.2E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS14250 ad9492a83973c80ba9f1000d2540a36e 339 SUPERFAMILY SSF53098 181 329 2.85E-22 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 4.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 4.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 4.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 SUPERFAMILY SSF51735 4 235 3.69E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PANTHER PTHR24322 9 172 1.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 Gene3D G3DSA:3.40.50.720 4 234 3.1E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PANTHER PTHR24322:SF459 9 172 1.9E-51 T 22-04-2016 RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 232 8.0E-47 T 22-04-2016 RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 7.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 7.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 7.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 7.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 7.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09640 8dd40f0e0f3cdd99a37fd82310ec11be 238 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 171 0.007 T 22-04-2016 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 Gene3D G3DSA:3.40.50.20 30 141 7.6E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 SUPERFAMILY SSF51246 339 409 2.59E-15 T 22-04-2016 IPR011054 Rudiment single hybrid motif RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 Pfam PF02222 ATP-grasp domain 146 314 5.1E-48 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 SUPERFAMILY SSF56059 137 334 3.91E-55 T 22-04-2016 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 Gene3D G3DSA:3.30.470.20 214 409 2.6E-67 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 PANTHER PTHR11609 16 401 4.7E-120 T 22-04-2016 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 36 398 1.6E-110 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 PANTHER PTHR11609:SF5 16 401 4.7E-120 T 22-04-2016 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 35 396 39.67 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 Gene3D G3DSA:3.30.1490.20 152 212 3.1E-17 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS02560 ecc2f1b349440b14f7b96394587413a7 414 SUPERFAMILY SSF52440 27 129 1.08E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS24705 34703cb2eb6a0bb83be4fc86d9084d4a 239 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 38 239 37.426 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD RMET_RS24705 34703cb2eb6a0bb83be4fc86d9084d4a 239 SUPERFAMILY SSF48452 69 155 6.24E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS24705 34703cb2eb6a0bb83be4fc86d9084d4a 239 PANTHER PTHR37423 30 238 1.7E-65 T 22-04-2016 RMET_RS24705 34703cb2eb6a0bb83be4fc86d9084d4a 239 Gene3D G3DSA:1.25.40.10 70 239 1.9E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS24705 34703cb2eb6a0bb83be4fc86d9084d4a 239 Pfam PF13525 Outer membrane lipoprotein 70 238 6.1E-55 T 22-04-2016 RMET_RS24705 34703cb2eb6a0bb83be4fc86d9084d4a 239 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 42 238 1.3E-74 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD RMET_RS06410 4951d83d9dd6de561c8b8b6834ee9d1b 410 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 116 196 1.1E-5 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS06410 4951d83d9dd6de561c8b8b6834ee9d1b 410 Gene3D G3DSA:1.10.443.10 221 399 1.2E-34 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06410 4951d83d9dd6de561c8b8b6834ee9d1b 410 PANTHER PTHR30349 37 397 1.6E-37 T 22-04-2016 RMET_RS06410 4951d83d9dd6de561c8b8b6834ee9d1b 410 PANTHER PTHR30349:SF5 37 397 1.6E-37 T 22-04-2016 RMET_RS06410 4951d83d9dd6de561c8b8b6834ee9d1b 410 SUPERFAMILY SSF56349 217 403 7.65E-37 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS06410 4951d83d9dd6de561c8b8b6834ee9d1b 410 Pfam PF00589 Phage integrase family 221 393 2.1E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06410 4951d83d9dd6de561c8b8b6834ee9d1b 410 Gene3D G3DSA:1.10.150.130 114 202 3.6E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS06410 4951d83d9dd6de561c8b8b6834ee9d1b 410 Gene3D G3DSA:1.10.150.130 17 99 8.5E-8 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 SUPERFAMILY SSF51735 115 267 1.03E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 PANTHER PTHR11695 19 327 2.3E-114 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 SUPERFAMILY SSF50129 2 147 1.73E-37 T 22-04-2016 IPR011032 GroES-like RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 Gene3D G3DSA:3.90.180.10 3 147 3.3E-45 T 22-04-2016 IPR011032 GroES-like RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 SMART SM00829 14 325 1.1E-14 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 91 3.8E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 Pfam PF00107 Zinc-binding dehydrogenase 154 255 5.8E-26 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 Gene3D G3DSA:3.40.50.720 148 259 3.3E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01005 b4d58810f2390369f61eaf5084424b39 327 PANTHER PTHR11695:SF605 19 327 2.3E-114 T 22-04-2016 RMET_RS16335 d94e7157ddafd9b08a3f1936900ab988 179 Pfam PF02470 MlaD protein 39 116 4.4E-23 T 22-04-2016 IPR003399 Mce/MlaD RMET_RS16335 d94e7157ddafd9b08a3f1936900ab988 179 PANTHER PTHR33371 1 146 4.1E-43 T 22-04-2016 RMET_RS16335 d94e7157ddafd9b08a3f1936900ab988 179 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 9.0E-62 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 PANTHER PTHR30154 1 146 7.3E-63 T 22-04-2016 RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 PANTHER PTHR30154:SF28 1 146 7.3E-63 T 22-04-2016 RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 Gene3D G3DSA:1.10.10.10 4 54 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 3.7E-19 T 22-04-2016 RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 Gene3D G3DSA:3.30.70.920 57 149 2.5E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 SUPERFAMILY SSF46785 2 62 2.07E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 4.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 4.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 4.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 SUPERFAMILY SSF54909 64 148 1.14E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 1.2E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS13310 e82eb182ed63731d3934d673aa28fb21 159 SMART SM00344 3 112 5.6E-38 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RMET_RS12610 9ebb27f3cae6c885c6b5b2c7cd8e39a7 558 PANTHER PTHR30003 1 556 4.9E-239 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RMET_RS12610 9ebb27f3cae6c885c6b5b2c7cd8e39a7 558 Pfam PF02652 L-lactate permease 14 546 9.5E-158 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RMET_RS12610 9ebb27f3cae6c885c6b5b2c7cd8e39a7 558 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 548 1.1E-159 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RMET_RS12610 9ebb27f3cae6c885c6b5b2c7cd8e39a7 558 PANTHER PTHR30003:SF0 1 556 4.9E-239 T 22-04-2016 RMET_RS02045 51239ae732c2038d8127d2f4a584bdea 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 353 1.0E-87 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS02045 51239ae732c2038d8127d2f4a584bdea 357 PANTHER PTHR11835 3 357 6.8E-218 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RMET_RS02045 51239ae732c2038d8127d2f4a584bdea 357 Gene3D G3DSA:3.40.718.10 3 347 3.1E-117 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS02045 51239ae732c2038d8127d2f4a584bdea 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RMET_RS02045 51239ae732c2038d8127d2f4a584bdea 357 PANTHER PTHR11835:SF37 3 357 6.8E-218 T 22-04-2016 RMET_RS02045 51239ae732c2038d8127d2f4a584bdea 357 SMART SM01329 5 353 3.7E-183 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS02045 51239ae732c2038d8127d2f4a584bdea 357 SUPERFAMILY SSF53659 2 357 2.88E-117 T 22-04-2016 RMET_RS02045 51239ae732c2038d8127d2f4a584bdea 357 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 357 1.2E-173 T 22-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 9 158 6.4E-60 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 Pfam PF00731 AIR carboxylase 9 156 8.6E-60 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 PIRSF PIRSF001338 4 162 4.5E-60 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 SUPERFAMILY SSF52255 8 161 1.16E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 PANTHER PTHR23046:SF2 3 161 1.0E-73 T 22-04-2016 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 9 162 29.853 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 PANTHER PTHR23046 3 161 1.0E-73 T 22-04-2016 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 Gene3D G3DSA:3.40.50.7700 3 159 1.1E-69 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RMET_RS02555 31aa16af55d3acc588d64d9ccd79416e 165 SMART SM01001 7 158 3.0E-93 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RMET_RS08695 0479ed246a4a32f17875e39f949cf198 185 PANTHER PTHR30529 9 185 2.1E-51 T 22-04-2016 RMET_RS08695 0479ed246a4a32f17875e39f949cf198 185 Pfam PF01292 Prokaryotic cytochrome b561 16 185 1.0E-28 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RMET_RS08695 0479ed246a4a32f17875e39f949cf198 185 SUPERFAMILY SSF81342 15 185 1.57E-31 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 Pfam PF00672 HAMP domain 223 285 1.0E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 PANTHER PTHR24423:SF474 231 497 1.3E-70 T 22-04-2016 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 PANTHER PTHR24423:SF474 5 18 1.3E-70 T 22-04-2016 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 Gene3D G3DSA:1.10.287.130 282 351 1.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 Pfam PF08521 Two-component sensor kinase N-terminal 68 213 4.7E-46 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 SUPERFAMILY SSF47384 273 353 3.53E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 SUPERFAMILY SSF55874 345 520 1.83E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 515 5.6E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 354 2.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 SMART SM00387 401 518 1.8E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 SMART SM00388 290 355 7.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 Gene3D G3DSA:3.30.565.10 362 521 6.4E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 PANTHER PTHR24423 231 497 1.3E-70 T 22-04-2016 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 PANTHER PTHR24423 5 18 1.3E-70 T 22-04-2016 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 4.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS02350 f326dce8d49ac3332c414636fc75f886 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 490 4.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS09485 5d1e894b94fcc3aff84c7a7e612caa20 149 SUPERFAMILY SSF141694 4 82 1.67E-13 T 22-04-2016 RMET_RS09485 5d1e894b94fcc3aff84c7a7e612caa20 149 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 90 146 2.8E-16 T 22-04-2016 RMET_RS09485 5d1e894b94fcc3aff84c7a7e612caa20 149 Gene3D G3DSA:2.40.30.100 5 81 8.6E-9 T 22-04-2016 RMET_RS09485 5d1e894b94fcc3aff84c7a7e612caa20 149 Pfam PF08922 Domain of unknown function (DUF1905) 5 80 4.9E-14 T 22-04-2016 IPR015018 Protein of unknown function DUF1905 RMET_RS09870 b3b818de0478782d72edf56655a168f4 153 PIRSF PIRSF000239 1 153 5.4E-32 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RMET_RS09870 b3b818de0478782d72edf56655a168f4 153 Pfam PF00578 AhpC/TSA family 6 132 1.8E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS09870 b3b818de0478782d72edf56655a168f4 153 SUPERFAMILY SSF52833 4 153 2.07E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS09870 b3b818de0478782d72edf56655a168f4 153 PANTHER PTHR10681 3 151 2.3E-44 T 22-04-2016 RMET_RS09870 b3b818de0478782d72edf56655a168f4 153 Gene3D G3DSA:3.40.30.10 2 151 3.0E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15745 5ca3911f1ce537979aed475a1bc1d545 330 SUPERFAMILY SSF56935 3 330 5.9E-70 T 22-04-2016 RMET_RS15745 5ca3911f1ce537979aed475a1bc1d545 330 Gene3D G3DSA:2.40.160.10 3 330 6.1E-77 T 22-04-2016 IPR023614 Porin domain RMET_RS15745 5ca3911f1ce537979aed475a1bc1d545 330 Pfam PF13609 Gram-negative porin 4 296 5.1E-37 T 22-04-2016 RMET_RS15745 5ca3911f1ce537979aed475a1bc1d545 330 PRINTS PR00184 Neisseria sp. porin signature 268 292 1.6E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS15745 5ca3911f1ce537979aed475a1bc1d545 330 PRINTS PR00184 Neisseria sp. porin signature 6 31 1.6E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS13475 470fa2d2bf34458fb93534a460085f28 186 Pfam PF13681 Type IV pilus assembly protein PilX C-term 92 186 1.9E-13 T 22-04-2016 IPR025205 PilX/PilW C-terminal domain RMET_RS10695 2b4e6787772911cea83d8d4a2dbda79c 296 Gene3D G3DSA:3.40.390.10 35 286 4.2E-31 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RMET_RS10695 2b4e6787772911cea83d8d4a2dbda79c 296 PANTHER PTHR30164 5 289 7.1E-64 T 22-04-2016 RMET_RS10695 2b4e6787772911cea83d8d4a2dbda79c 296 SUPERFAMILY SSF55486 48 286 1.83E-34 T 22-04-2016 RMET_RS10695 2b4e6787772911cea83d8d4a2dbda79c 296 Pfam PF06167 Glucose-regulated metallo-peptidase M90 10 285 5.6E-91 T 22-04-2016 IPR010384 MtfA family RMET_RS08035 b9cd82ed95b17f639683a0e390b88e7e 115 Pfam PF07883 Cupin domain 45 108 2.6E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RMET_RS08035 b9cd82ed95b17f639683a0e390b88e7e 115 Gene3D G3DSA:2.60.120.10 19 111 2.1E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS08035 b9cd82ed95b17f639683a0e390b88e7e 115 SUPERFAMILY SSF51182 9 112 3.45E-19 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS03380 45a67713f32eea614a892143ccf66bcd 122 SUPERFAMILY SSF52172 5 121 1.15E-37 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS03380 45a67713f32eea614a892143ccf66bcd 122 Gene3D G3DSA:3.40.50.2300 5 121 1.2E-38 T 22-04-2016 RMET_RS03380 45a67713f32eea614a892143ccf66bcd 122 Pfam PF00072 Response regulator receiver domain 6 117 7.9E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS03380 45a67713f32eea614a892143ccf66bcd 122 PANTHER PTHR26402 4 121 3.3E-40 T 22-04-2016 RMET_RS03380 45a67713f32eea614a892143ccf66bcd 122 SMART SM00448 4 117 1.5E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 Gene3D G3DSA:3.40.630.10 356 414 1.9E-96 T 22-04-2016 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 Gene3D G3DSA:3.40.630.10 13 231 1.9E-96 T 22-04-2016 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 SUPERFAMILY SSF53187 341 414 2.29E-74 T 22-04-2016 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 SUPERFAMILY SSF53187 21 229 2.29E-74 T 22-04-2016 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 Pfam PF01546 Peptidase family M20/M25/M40 83 412 1.0E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 SUPERFAMILY SSF55031 219 330 5.23E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 31 411 4.5E-108 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 PIRSF PIRSF001235 9 417 3.0E-126 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 Gene3D G3DSA:3.30.70.360 232 334 2.2E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 PANTHER PTHR32494:SF5 13 414 3.9E-145 T 22-04-2016 RMET_RS17300 c06a59700fbd0876cb2591397dacfcd5 418 PANTHER PTHR32494 13 414 3.9E-145 T 22-04-2016 RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 PANTHER PTHR11732 1 136 2.3E-143 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 PANTHER PTHR11732 270 351 2.3E-143 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 PANTHER PTHR11732 154 252 2.3E-143 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 Gene3D G3DSA:3.20.20.100 1 349 4.9E-103 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 Pfam PF00248 Aldo/keto reductase family 15 343 6.6E-70 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 SUPERFAMILY SSF51430 1 348 5.63E-102 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 PANTHER PTHR11732:SF112 1 136 2.3E-143 T 22-04-2016 RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 PANTHER PTHR11732:SF112 270 351 2.3E-143 T 22-04-2016 RMET_RS06115 a17694bed5784dd50d3c0bc8b92ddb32 352 PANTHER PTHR11732:SF112 154 252 2.3E-143 T 22-04-2016 RMET_RS01805 a0ae1dcefdb533778575b8e9f0c99791 585 Gene3D G3DSA:1.50.10.10 208 581 6.8E-81 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RMET_RS01805 a0ae1dcefdb533778575b8e9f0c99791 585 PANTHER PTHR31616 1 585 9.5E-138 T 22-04-2016 RMET_RS01805 a0ae1dcefdb533778575b8e9f0c99791 585 Pfam PF00723 Glycosyl hydrolases family 15 210 519 3.8E-29 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 RMET_RS01805 a0ae1dcefdb533778575b8e9f0c99791 585 PANTHER PTHR31616:SF2 1 585 9.5E-138 T 22-04-2016 RMET_RS01805 a0ae1dcefdb533778575b8e9f0c99791 585 SUPERFAMILY SSF48208 194 581 4.91E-92 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 311 332 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 SUPERFAMILY SSF54534 263 371 7.2E-34 T 22-04-2016 RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 Gene3D G3DSA:3.10.50.40 263 395 8.6E-47 T 22-04-2016 RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 Pfam PF13624 SurA N-terminal domain 1 166 5.5E-45 T 22-04-2016 RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 PANTHER PTHR10657:SF11 244 530 1.8E-78 T 22-04-2016 RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 PANTHER PTHR10657:SF11 1 169 1.8E-78 T 22-04-2016 RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 SUPERFAMILY SSF109998 41 170 5.89E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 SUPERFAMILY SSF109998 244 300 5.89E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 Pfam PF13616 PPIC-type PPIASE domain 268 372 1.7E-30 T 22-04-2016 RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 PANTHER PTHR10657 244 530 1.8E-78 T 22-04-2016 RMET_RS09425 d478097aa6be64bf8db8be382891a21f 647 PANTHER PTHR10657 1 169 1.8E-78 T 22-04-2016 RMET_RS16325 dfb62cc52156151b2c56bc2d9bb70149 208 Gene3D G3DSA:1.10.10.640 172 206 1.6E-27 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RMET_RS16325 dfb62cc52156151b2c56bc2d9bb70149 208 Gene3D G3DSA:1.10.10.640 74 114 1.6E-27 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RMET_RS16325 dfb62cc52156151b2c56bc2d9bb70149 208 PANTHER PTHR36573 1 202 1.4E-30 T 22-04-2016 RMET_RS16325 dfb62cc52156151b2c56bc2d9bb70149 208 Pfam PF05494 MlaC protein 36 197 1.9E-49 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RMET_RS16325 dfb62cc52156151b2c56bc2d9bb70149 208 Gene3D G3DSA:3.10.450.50 117 171 4.3E-33 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS16325 dfb62cc52156151b2c56bc2d9bb70149 208 Gene3D G3DSA:3.10.450.50 29 73 4.3E-33 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS16325 dfb62cc52156151b2c56bc2d9bb70149 208 PIRSF PIRSF004649 1 208 1.5E-48 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RMET_RS01755 6cf132ba0f63c6246512a242bff683f0 399 SUPERFAMILY SSF53383 21 398 1.3E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS01755 6cf132ba0f63c6246512a242bff683f0 399 Gene3D G3DSA:3.40.640.10 55 268 9.1E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS01755 6cf132ba0f63c6246512a242bff683f0 399 Pfam PF00155 Aminotransferase class I and II 53 393 1.0E-52 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS01755 6cf132ba0f63c6246512a242bff683f0 399 Gene3D G3DSA:3.90.1150.10 269 397 7.0E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS01755 6cf132ba0f63c6246512a242bff683f0 399 PANTHER PTHR11751 29 394 4.3E-97 T 22-04-2016 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.5E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 1.5E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.5E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.5E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 1.5E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 Gene3D G3DSA:3.40.50.1370 6 143 1.7E-56 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PANTHER PTHR11405:SF1 7 303 1.6E-129 T 22-04-2016 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PANTHER PTHR11405 7 303 1.6E-129 T 22-04-2016 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 SUPERFAMILY SSF53671 4 303 1.22E-103 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.3E-49 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 301 2.2E-48 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 1.1E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.1E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 1.1E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.1E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 Gene3D G3DSA:3.40.50.1370 144 290 4.9E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 303 4.5E-105 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RMET_RS14545 36c7cc22ca3d41b243df31c115070c34 307 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 304 76.338 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PANTHER PTHR30009:SF0 1 417 5.5E-282 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PANTHER PTHR30009:SF0 464 651 5.5E-282 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 636 7.4E-226 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 626 639 4.1E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.1E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 4.1E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 4.1E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 4.1E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 4.1E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.1E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 Pfam PF01578 Cytochrome C assembly protein 89 295 2.7E-49 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 633 4.6E-126 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.5E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.5E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.5E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.5E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.5E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.5E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.5E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.5E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PANTHER PTHR30009 1 417 5.5E-282 T 22-04-2016 RMET_RS11985 a5db9da849086bf2d6dcd83e017d8e89 653 PANTHER PTHR30009 464 651 5.5E-282 T 22-04-2016 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 SUPERFAMILY SSF56601 267 627 4.88E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 252 9.6E-41 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 627 1.4E-233 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 SUPERFAMILY SSF56519 53 266 1.96E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 Gene3D G3DSA:3.90.1310.10 128 265 5.4E-36 T 22-04-2016 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 PANTHER PTHR30627:SF2 210 668 2.3E-220 T 22-04-2016 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 PANTHER PTHR30627:SF2 2 193 2.3E-220 T 22-04-2016 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 Gene3D G3DSA:3.40.710.10 266 627 4.9E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 PANTHER PTHR30627 210 668 2.3E-220 T 22-04-2016 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 PANTHER PTHR30627 2 193 2.3E-220 T 22-04-2016 RMET_RS00285 9f019e02d7f78eb7b20a7bf6af183209 793 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 624 1.4E-65 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 Gene3D G3DSA:3.40.50.720 2 252 3.9E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 250 4.3E-62 T 22-04-2016 RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PANTHER PTHR24321 2 253 3.7E-51 T 22-04-2016 RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PANTHER PTHR24321:SF6 2 253 3.7E-51 T 22-04-2016 RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.9E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.9E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.9E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.9E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.9E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.9E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03405 10cbbde770ee8a821968790339caeca0 253 SUPERFAMILY SSF51735 6 252 7.77E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 Pfam PF13417 Glutathione S-transferase, N-terminal domain 158 228 8.9E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 SUPERFAMILY SSF47616 220 357 6.11E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 Gene3D G3DSA:3.40.30.10 151 240 1.7E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 SUPERFAMILY SSF52833 153 231 2.7E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 Pfam PF00043 Glutathione S-transferase, C-terminal domain 263 350 3.2E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 16 146 2.7E-31 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 Gene3D G3DSA:3.30.530.20 2 148 9.4E-43 T 22-04-2016 IPR023393 START-like domain RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 SUPERFAMILY SSF55961 5 147 1.53E-41 T 22-04-2016 RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 Gene3D G3DSA:1.20.1050.10 241 357 1.7E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS12540 191049d5e68fafb2b6bc5adb8c63e006 360 PANTHER PTHR11260 132 357 2.3E-43 T 22-04-2016 RMET_RS14305 b18a77db96e94212db4c6a82241b0c01 191 Pfam PF05962 HutD 9 167 5.9E-55 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves RMET_RS14305 b18a77db96e94212db4c6a82241b0c01 191 PANTHER PTHR37943 12 141 2.0E-48 T 22-04-2016 RMET_RS14305 b18a77db96e94212db4c6a82241b0c01 191 SUPERFAMILY SSF51182 5 185 1.16E-56 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS14305 b18a77db96e94212db4c6a82241b0c01 191 PANTHER PTHR37943:SF1 12 141 2.0E-48 T 22-04-2016 RMET_RS14305 b18a77db96e94212db4c6a82241b0c01 191 Gene3D G3DSA:2.60.120.10 106 142 6.6E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS14305 b18a77db96e94212db4c6a82241b0c01 191 Gene3D G3DSA:2.60.120.10 9 105 7.0E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS26470 dc7d6be1ed9d4a13e8b280e7ccf892a9 124 Pfam PF02785 Biotin carboxylase C-terminal domain 1 77 9.4E-23 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS26470 dc7d6be1ed9d4a13e8b280e7ccf892a9 124 PANTHER PTHR18866 1 101 9.5E-30 T 22-04-2016 RMET_RS26470 dc7d6be1ed9d4a13e8b280e7ccf892a9 124 SUPERFAMILY SSF51246 1 81 3.77E-23 T 22-04-2016 IPR011054 Rudiment single hybrid motif RMET_RS26470 dc7d6be1ed9d4a13e8b280e7ccf892a9 124 SMART SM00878 1 77 1.9E-22 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RMET_RS26470 dc7d6be1ed9d4a13e8b280e7ccf892a9 124 Gene3D G3DSA:3.30.470.20 1 81 4.2E-20 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS05870 c8759007f5305119c81025399834097e 136 PANTHER PTHR33175 40 131 9.4E-49 T 22-04-2016 RMET_RS05870 c8759007f5305119c81025399834097e 136 Gene3D G3DSA:4.10.520.10 39 130 1.9E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RMET_RS05870 c8759007f5305119c81025399834097e 136 PANTHER PTHR33175:SF2 40 131 9.4E-49 T 22-04-2016 RMET_RS05870 c8759007f5305119c81025399834097e 136 PRINTS PR01727 Prokaryotic integration host factor signature 113 127 3.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS05870 c8759007f5305119c81025399834097e 136 PRINTS PR01727 Prokaryotic integration host factor signature 97 110 3.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS05870 c8759007f5305119c81025399834097e 136 PRINTS PR01727 Prokaryotic integration host factor signature 79 94 3.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS05870 c8759007f5305119c81025399834097e 136 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 85 104 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RMET_RS05870 c8759007f5305119c81025399834097e 136 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 38 134 30.122 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RMET_RS05870 c8759007f5305119c81025399834097e 136 Pfam PF00216 Bacterial DNA-binding protein 40 128 8.7E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS05870 c8759007f5305119c81025399834097e 136 SMART SM00411 40 129 7.7E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS05870 c8759007f5305119c81025399834097e 136 SUPERFAMILY SSF47729 40 130 6.48E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RMET_RS05870 c8759007f5305119c81025399834097e 136 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 39 133 8.1E-45 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 PANTHER PTHR24032 18 267 2.2E-94 T 22-04-2016 RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 17 264 2.9E-76 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 13 277 43.565 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 PIRSF PIRSF000903 13 284 1.6E-102 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 Gene3D G3DSA:3.60.21.10 16 139 1.2E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 Gene3D G3DSA:3.60.21.10 176 268 1.2E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 Pfam PF00149 Calcineurin-like phosphoesterase 16 172 4.0E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 PANTHER PTHR24032:SF27 18 267 2.2E-94 T 22-04-2016 RMET_RS13730 9eb2c46a96d0eae02982f463cf1df644 286 SUPERFAMILY SSF56300 16 280 2.64E-50 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 SUPERFAMILY SSF56003 134 786 6.28E-201 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Gene3D G3DSA:3.90.1170.50 4 130 1.8E-44 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Gene3D G3DSA:3.30.365.10 465 634 1.4E-50 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Gene3D G3DSA:3.30.365.10 375 464 3.2E-68 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Gene3D G3DSA:3.30.365.10 635 786 3.2E-68 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 SUPERFAMILY SSF54665 6 161 8.9E-47 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 157 721 5.0E-175 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 22 142 6.9E-30 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 SMART SM01008 22 142 1.4E-57 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Gene3D G3DSA:3.30.365.10 131 187 1.2E-50 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Gene3D G3DSA:3.30.365.10 296 372 1.2E-50 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 PANTHER PTHR11908:SF85 8 586 0.0 T 22-04-2016 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 PANTHER PTHR11908:SF85 603 791 0.0 T 22-04-2016 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 PANTHER PTHR11908 8 586 0.0 T 22-04-2016 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 PANTHER PTHR11908 603 791 0.0 T 22-04-2016 RMET_RS01845 37b16f049d1759b52fb181cfaeea9cc4 792 Gene3D G3DSA:3.30.365.10 188 294 8.1E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 3.3E-279 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Gene3D G3DSA:2.60.34.10 391 532 3.8E-52 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Gene3D G3DSA:3.90.640.10 238 313 1.3E-5 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 470 486 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 389 408 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 71 79 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 210 220 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 151 171 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 363 383 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PRINTS PR00301 70kDa heat shock protein signature 332 348 8.1E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Pfam PF00012 Hsp70 protein 21 603 1.6E-178 T 22-04-2016 IPR013126 Heat shock protein 70 family RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 SUPERFAMILY SSF53067 19 195 4.75E-53 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PANTHER PTHR19375:SF176 19 608 4.5E-256 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 PANTHER PTHR19375 19 608 4.5E-256 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 SUPERFAMILY SSF100934 508 618 1.73E-35 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 SUPERFAMILY SSF53067 200 379 4.67E-49 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Gene3D G3DSA:3.30.420.40 114 204 4.4E-53 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Gene3D G3DSA:3.30.420.40 9 48 4.4E-53 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Gene3D G3DSA:3.30.420.40 205 237 1.4E-30 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Gene3D G3DSA:3.30.420.40 317 359 1.4E-30 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Gene3D G3DSA:1.20.1270.10 533 618 1.8E-30 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Gene3D G3DSA:3.30.30.30 59 97 4.0E-7 T 22-04-2016 RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 SUPERFAMILY SSF100920 388 539 5.89E-48 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RMET_RS05175 93896b52a11b15831b11663d75a8e5aa 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 43.881 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RMET_RS02995 0d0cd0c8ece81804aeb9a2e7ab64fd4a 292 Gene3D G3DSA:1.10.760.10 198 290 1.7E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS02995 0d0cd0c8ece81804aeb9a2e7ab64fd4a 292 PANTHER PTHR35008:SF1 8 291 2.3E-12 T 22-04-2016 RMET_RS02995 0d0cd0c8ece81804aeb9a2e7ab64fd4a 292 PANTHER PTHR35008 8 291 2.3E-12 T 22-04-2016 RMET_RS02995 0d0cd0c8ece81804aeb9a2e7ab64fd4a 292 SUPERFAMILY SSF46626 46 159 5.7E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS02995 0d0cd0c8ece81804aeb9a2e7ab64fd4a 292 Gene3D G3DSA:1.10.760.10 42 155 6.0E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS02995 0d0cd0c8ece81804aeb9a2e7ab64fd4a 292 SUPERFAMILY SSF46626 188 290 1.19E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS02995 0d0cd0c8ece81804aeb9a2e7ab64fd4a 292 Pfam PF00034 Cytochrome c 57 151 7.1E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08605 9c4bb572d1e7ffd97765951bd8d5f7e5 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 2 273 1.3E-58 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 RMET_RS08605 9c4bb572d1e7ffd97765951bd8d5f7e5 282 SUPERFAMILY SSF51197 1 282 2.66E-85 T 22-04-2016 RMET_RS08605 9c4bb572d1e7ffd97765951bd8d5f7e5 282 PANTHER PTHR30468 1 282 1.1E-67 T 22-04-2016 RMET_RS08605 9c4bb572d1e7ffd97765951bd8d5f7e5 282 Gene3D G3DSA:3.60.130.10 1 282 5.3E-87 T 22-04-2016 RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 SUPERFAMILY SSF51735 1 257 4.8E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 Gene3D G3DSA:3.40.50.720 2 257 5.2E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PANTHER PTHR24322 11 137 3.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PANTHER PTHR24322 153 185 3.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 256 4.0E-55 T 22-04-2016 RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 7 258 2.4E-105 T 22-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PANTHER PTHR24322:SF328 11 137 3.9E-51 T 22-04-2016 RMET_RS02760 47445b48a3effb1e32263a4bc3a7d4f3 258 PANTHER PTHR24322:SF328 153 185 3.9E-51 T 22-04-2016 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 52 821 0.0 T 22-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 Gene3D G3DSA:3.40.228.10 194 399 2.6E-58 T 22-04-2016 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 Gene3D G3DSA:3.40.50.740 400 505 2.0E-51 T 22-04-2016 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 Gene3D G3DSA:3.40.50.740 88 190 2.0E-51 T 22-04-2016 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 504 521 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 PANTHER PTHR11615:SF19 88 824 1.4E-274 T 22-04-2016 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 Gene3D G3DSA:2.40.40.20 655 816 5.4E-54 T 22-04-2016 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 PANTHER PTHR11615 88 824 1.4E-274 T 22-04-2016 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 SUPERFAMILY SSF50692 673 820 6.56E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 Pfam PF01568 Molydopterin dinucleotide binding domain 684 798 1.1E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 SUPERFAMILY SSF53706 53 681 8.38E-178 T 22-04-2016 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 719 746 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 Pfam PF00384 Molybdopterin oxidoreductase 95 562 2.9E-94 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS05760 8a4a14c30863d625aa7e7831521b553c 825 Gene3D G3DSA:3.90.55.10 506 608 1.0E-35 T 22-04-2016 RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 Gene3D G3DSA:3.40.50.790 69 159 1.5E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.959 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 PANTHER PTHR23105 21 229 7.0E-74 T 22-04-2016 RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 PIRSF PIRSF002155 1 227 5.6E-76 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 PANTHER PTHR23105:SF5 21 229 7.0E-74 T 22-04-2016 RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 4.5E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 5.1E-104 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 Gene3D G3DSA:3.30.190.20 16 68 3.0E-44 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 Gene3D G3DSA:3.30.190.20 161 225 3.0E-44 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RMET_RS16735 7185b2f45c24d04a923f63c9df32c0a0 231 SUPERFAMILY SSF56808 6 225 8.89E-80 T 22-04-2016 IPR023674 Ribosomal protein L1-like RMET_RS17340 9cf03046eafb4a4b4f4099a5932e816c 443 SUPERFAMILY SSF82544 28 442 1.83E-155 T 22-04-2016 RMET_RS17340 9cf03046eafb4a4b4f4099a5932e816c 443 Gene3D G3DSA:3.40.1480.10 263 442 7.2E-72 T 22-04-2016 IPR007835 MOFRL domain RMET_RS17340 9cf03046eafb4a4b4f4099a5932e816c 443 PANTHER PTHR12227:SF0 10 443 2.4E-143 T 22-04-2016 RMET_RS17340 9cf03046eafb4a4b4f4099a5932e816c 443 Pfam PF05161 MOFRL family 331 436 6.4E-36 T 22-04-2016 IPR007835 MOFRL domain RMET_RS17340 9cf03046eafb4a4b4f4099a5932e816c 443 Pfam PF13660 Domain of unknown function (DUF4147) 32 252 7.8E-83 T 22-04-2016 IPR025286 MOFRL-associated domain RMET_RS17340 9cf03046eafb4a4b4f4099a5932e816c 443 Gene3D G3DSA:3.40.50.10180 32 262 2.5E-103 T 22-04-2016 RMET_RS17340 9cf03046eafb4a4b4f4099a5932e816c 443 PANTHER PTHR12227 10 443 2.4E-143 T 22-04-2016 RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 8.4E-117 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 Pfam PF01138 3' exoribonuclease family, domain 1 11 140 5.2E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 PANTHER PTHR11953 1 236 3.9E-77 T 22-04-2016 RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 SUPERFAMILY SSF55666 154 236 3.4E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 PANTHER PTHR11953:SF0 1 236 3.9E-77 T 22-04-2016 RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.607 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 223 3.3E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 Gene3D G3DSA:3.30.230.70 9 235 1.4E-30 T 22-04-2016 IPR027408 PNPase/RNase PH domain RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 SUPERFAMILY SSF54211 1 181 4.76E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS04280 f18dab06eb70f7da5ff8c73d7503a0e9 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site RMET_RS15810 173460135943e28877ccbf75062c0087 535 Gene3D G3DSA:3.10.105.10 309 503 4.3E-56 T 22-04-2016 RMET_RS15810 173460135943e28877ccbf75062c0087 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 447 1.7E-92 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RMET_RS15810 173460135943e28877ccbf75062c0087 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 82 103 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site RMET_RS15810 173460135943e28877ccbf75062c0087 535 Gene3D G3DSA:3.90.76.10 44 193 1.3E-35 T 22-04-2016 RMET_RS15810 173460135943e28877ccbf75062c0087 535 PANTHER PTHR30290 36 284 5.6E-124 T 22-04-2016 RMET_RS15810 173460135943e28877ccbf75062c0087 535 PANTHER PTHR30290 301 520 5.6E-124 T 22-04-2016 RMET_RS15810 173460135943e28877ccbf75062c0087 535 PIRSF PIRSF002741 29 530 2.3E-99 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RMET_RS15810 173460135943e28877ccbf75062c0087 535 Gene3D G3DSA:3.40.190.10 194 308 9.8E-39 T 22-04-2016 RMET_RS15810 173460135943e28877ccbf75062c0087 535 SUPERFAMILY SSF53850 35 515 1.57E-130 T 22-04-2016 RMET_RS01990 0498bf363fec8bba7b8ddf8d68708256 281 PANTHER PTHR24220 23 254 3.2E-80 T 22-04-2016 RMET_RS01990 0498bf363fec8bba7b8ddf8d68708256 281 SUPERFAMILY SSF52540 22 256 7.61E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01990 0498bf363fec8bba7b8ddf8d68708256 281 Gene3D G3DSA:3.40.50.300 21 242 3.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01990 0498bf363fec8bba7b8ddf8d68708256 281 Pfam PF00005 ABC transporter 44 189 4.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS01990 0498bf363fec8bba7b8ddf8d68708256 281 SMART SM00382 52 254 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01990 0498bf363fec8bba7b8ddf8d68708256 281 PANTHER PTHR24220:SF589 23 254 3.2E-80 T 22-04-2016 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 ProSitePatterns PS00855 Signal peptidases II signature. 101 113 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 Pfam PF01252 Signal peptidase (SPase) II 15 153 8.1E-34 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 PANTHER PTHR33695 4 166 3.7E-46 T 22-04-2016 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 134 150 2.4E-15 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 2.4E-15 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 98 113 2.4E-15 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 159 15.284 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 PANTHER PTHR33695:SF1 4 166 3.7E-46 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS11565 414c8b0e2aee1afde8362aff5e4ae6cc 166 TIGRFAM TIGR00077 lspA: signal peptidase II 11 157 3.9E-37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RMET_RS01730 73ae518714b5866e3b33913150073b8e 453 Pfam PF07690 Major Facilitator Superfamily 44 411 1.5E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS01730 73ae518714b5866e3b33913150073b8e 453 SUPERFAMILY SSF103473 26 450 2.22E-82 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS01730 73ae518714b5866e3b33913150073b8e 453 PANTHER PTHR11662 27 443 2.2E-135 T 22-04-2016 RMET_RS01730 73ae518714b5866e3b33913150073b8e 453 Gene3D G3DSA:1.20.1250.20 35 236 8.6E-46 T 22-04-2016 RMET_RS01730 73ae518714b5866e3b33913150073b8e 453 PANTHER PTHR11662:SF3 27 443 2.2E-135 T 22-04-2016 RMET_RS01730 73ae518714b5866e3b33913150073b8e 453 Gene3D G3DSA:1.20.1250.20 260 451 6.7E-21 T 22-04-2016 RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 PANTHER PTHR11993:SF22 132 204 9.8E-71 T 22-04-2016 RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 PANTHER PTHR11993 271 286 9.8E-71 T 22-04-2016 RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 PANTHER PTHR11993 1 61 9.8E-71 T 22-04-2016 RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 PANTHER PTHR11993:SF22 271 286 9.8E-71 T 22-04-2016 RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 PANTHER PTHR11993:SF22 1 61 9.8E-71 T 22-04-2016 RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 Gene3D G3DSA:1.10.645.10 1 306 1.3E-111 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 Pfam PF00374 Nickel-dependent hydrogenase 1 306 1.1E-115 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 SUPERFAMILY SSF56762 1 305 1.15E-84 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS24505 a564828cc2047228bb40e32c8fd13f9b 311 PANTHER PTHR11993 132 204 9.8E-71 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 SUPERFAMILY SSF55021 676 751 1.34E-9 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Gene3D G3DSA:1.10.3210.10 411 598 1.1E-24 T 22-04-2016 IPR006674 HD domain RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Pfam PF01842 ACT domain 787 837 1.3E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Pfam PF08335 GlnD PII-uridylyltransferase 166 304 1.0E-34 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 SMART SM00471 437 584 8.7E-6 T 22-04-2016 IPR003607 HD/PDEase domain RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 SUPERFAMILY SSF81301 41 157 1.77E-21 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 23 855 3.5E-238 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 PANTHER PTHR13734:SF45 99 675 2.5E-91 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 PIRSF PIRSF006288 2 857 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 857 323.91 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Gene3D G3DSA:3.30.460.10 63 156 1.7E-8 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 SUPERFAMILY SSF109604 408 532 8.79E-16 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Pfam PF01966 HD domain 442 544 2.2E-10 T 22-04-2016 IPR006674 HD domain RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Pfam PF01909 Nucleotidyltransferase domain 58 110 2.8E-6 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Gene3D G3DSA:3.30.70.260 784 849 6.6E-14 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 Gene3D G3DSA:3.30.70.260 676 750 1.5E-4 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 PANTHER PTHR13734 99 675 2.5E-91 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 SUPERFAMILY SSF55021 784 839 4.96E-11 T 22-04-2016 RMET_RS07220 9890173fa3afaf224375cf0d1da6d6d7 857 SUPERFAMILY SSF81593 169 299 1.73E-11 T 22-04-2016 RMET_RS02825 b4ca63a2b62c4be69434e445855bec67 349 Pfam PF02615 Malate/L-lactate dehydrogenase 4 335 2.2E-102 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS02825 b4ca63a2b62c4be69434e445855bec67 349 PANTHER PTHR11091 1 349 1.3E-80 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS02825 b4ca63a2b62c4be69434e445855bec67 349 SUPERFAMILY SSF89733 1 347 5.1E-102 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS02825 b4ca63a2b62c4be69434e445855bec67 349 Gene3D G3DSA:3.30.1370.60 72 276 3.1E-70 T 22-04-2016 RMET_RS02825 b4ca63a2b62c4be69434e445855bec67 349 Gene3D G3DSA:1.10.1530.10 1 71 1.1E-21 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 ProSitePatterns PS00447 DNA polymerase family A signature. 760 779 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PANTHER PTHR10133:SF27 318 933 0.0 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PANTHER PTHR10133:SF27 1 283 0.0 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Gene3D G3DSA:3.30.70.370 669 717 5.2E-65 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Gene3D G3DSA:3.30.70.370 824 934 5.2E-65 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Pfam PF01612 3'-5' exonuclease 332 523 1.0E-38 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Pfam PF00476 DNA polymerase family A 557 932 1.5E-150 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 SUPERFAMILY SSF53098 335 523 2.12E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Gene3D G3DSA:1.10.150.20 718 823 1.1E-36 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 170 258 2.1E-25 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Gene3D G3DSA:3.40.50.1010 6 184 1.0E-69 T 22-04-2016 IPR029060 PIN domain-like RMET_RS13190 8613b578664048162bae936ccd329c96 934 SUPERFAMILY SSF47807 170 286 5.38E-32 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Gene3D G3DSA:1.10.150.20 185 245 2.1E-24 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 SMART SM00474 332 523 1.4E-37 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RMET_RS13190 8613b578664048162bae936ccd329c96 934 SMART SM00482 692 898 2.7E-113 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PANTHER PTHR10133 318 933 0.0 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PANTHER PTHR10133 1 283 0.0 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 SUPERFAMILY SSF56672 528 934 4.23E-155 T 22-04-2016 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Gene3D G3DSA:3.30.420.10 330 548 3.4E-78 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS13190 8613b578664048162bae936ccd329c96 934 SMART SM00279 172 207 7.4E-12 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 8 169 1.9E-52 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RMET_RS13190 8613b578664048162bae936ccd329c96 934 TIGRFAM TIGR00593 pola: DNA polymerase I 8 934 1.7E-279 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 SMART SM00475 4 260 1.6E-114 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RMET_RS13190 8613b578664048162bae936ccd329c96 934 SUPERFAMILY SSF88723 3 169 2.23E-57 T 22-04-2016 IPR029060 PIN domain-like RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 851 867 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 706 729 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 797 808 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 785 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 819 830 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 881 894 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 684 699 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 661 683 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 736 749 2.5E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS13190 8613b578664048162bae936ccd329c96 934 Gene3D G3DSA:1.20.1060.10 549 668 4.9E-35 T 22-04-2016 RMET_RS06985 581263ef5e379f44426a56d4e329e17c 529 Pfam PF11329 Protein of unknown function (DUF3131) 138 256 5.3E-7 T 22-04-2016 IPR021478 Protein of unknown function DUF3131 RMET_RS12040 6300cf8470c5b01d25fa14cd1d1dcaf1 218 SUPERFAMILY SSF53850 10 211 1.54E-24 T 22-04-2016 RMET_RS12040 6300cf8470c5b01d25fa14cd1d1dcaf1 218 Gene3D G3DSA:3.40.190.10 10 94 1.0E-12 T 22-04-2016 RMET_RS12040 6300cf8470c5b01d25fa14cd1d1dcaf1 218 Gene3D G3DSA:3.40.190.10 95 179 1.1E-8 T 22-04-2016 RMET_RS12040 6300cf8470c5b01d25fa14cd1d1dcaf1 218 Pfam PF03466 LysR substrate binding domain 10 196 2.2E-22 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS12040 6300cf8470c5b01d25fa14cd1d1dcaf1 218 PANTHER PTHR30346 11 210 6.1E-22 T 22-04-2016 RMET_RS07550 d2bf3dda49bd1791b3aab53aded8c830 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 264 4.5E-32 T 22-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal RMET_RS07550 d2bf3dda49bd1791b3aab53aded8c830 267 PANTHER PTHR22908 14 255 1.3E-35 T 22-04-2016 RMET_RS07550 d2bf3dda49bd1791b3aab53aded8c830 267 Pfam PF07728 AAA domain (dynein-related subfamily) 36 169 5.3E-33 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RMET_RS07550 d2bf3dda49bd1791b3aab53aded8c830 267 SUPERFAMILY SSF52540 16 225 3.83E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07550 d2bf3dda49bd1791b3aab53aded8c830 267 Gene3D G3DSA:3.40.50.300 27 183 2.1E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09550 3a2bbe66fabc8ab82cddfc40d10f3ef2 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 320 2.2E-89 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS09550 3a2bbe66fabc8ab82cddfc40d10f3ef2 325 PANTHER PTHR30349:SF16 1 309 3.8E-100 T 22-04-2016 RMET_RS09550 3a2bbe66fabc8ab82cddfc40d10f3ef2 325 Gene3D G3DSA:3.40.190.10 128 246 1.1E-5 T 22-04-2016 RMET_RS09550 3a2bbe66fabc8ab82cddfc40d10f3ef2 325 PANTHER PTHR30349 1 309 3.8E-100 T 22-04-2016 RMET_RS09550 3a2bbe66fabc8ab82cddfc40d10f3ef2 325 PIRSF PIRSF017082 1 323 5.3E-88 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS09550 3a2bbe66fabc8ab82cddfc40d10f3ef2 325 SUPERFAMILY SSF53850 113 285 1.18E-17 T 22-04-2016 RMET_RS07935 b34da44984a556d3d63d9a83d8304755 476 PANTHER PTHR11699 1 472 6.0E-230 T 22-04-2016 RMET_RS07935 b34da44984a556d3d63d9a83d8304755 476 PANTHER PTHR11699:SF212 1 472 6.0E-230 T 22-04-2016 RMET_RS07935 b34da44984a556d3d63d9a83d8304755 476 SUPERFAMILY SSF53720 4 470 8.51E-159 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS07935 b34da44984a556d3d63d9a83d8304755 476 Pfam PF00171 Aldehyde dehydrogenase family 13 469 7.8E-164 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS07935 b34da44984a556d3d63d9a83d8304755 476 Gene3D G3DSA:3.40.605.10 4 257 5.8E-87 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS07935 b34da44984a556d3d63d9a83d8304755 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RMET_RS07935 b34da44984a556d3d63d9a83d8304755 476 Gene3D G3DSA:3.40.309.10 258 445 4.4E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 PANTHER PTHR13847 107 425 4.1E-126 T 22-04-2016 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 PANTHER PTHR13847 1 63 4.1E-126 T 22-04-2016 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 PANTHER PTHR13847:SF148 107 425 4.1E-126 T 22-04-2016 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 PANTHER PTHR13847:SF148 1 63 4.1E-126 T 22-04-2016 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 Gene3D G3DSA:3.50.50.60 1 55 1.3E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 Gene3D G3DSA:3.50.50.60 363 425 1.3E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 Gene3D G3DSA:3.50.50.60 188 272 1.3E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 Gene3D G3DSA:3.50.50.60 108 122 1.3E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 SUPERFAMILY SSF51905 1 54 4.01E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 SUPERFAMILY SSF51905 107 273 4.01E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 SUPERFAMILY SSF51905 363 424 4.01E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 Gene3D G3DSA:3.30.9.10 273 361 7.2E-14 T 22-04-2016 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 Gene3D G3DSA:3.30.9.10 135 187 7.2E-14 T 22-04-2016 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 SUPERFAMILY SSF54373 273 363 1.31E-14 T 22-04-2016 RMET_RS09400 d3aee1a0c613387021c5e0619bea1550 429 Pfam PF01266 FAD dependent oxidoreductase 2 400 1.6E-61 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 SMART SM00829 19 334 3.7E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 SUPERFAMILY SSF51735 124 302 3.52E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 SUPERFAMILY SSF50129 5 141 2.45E-42 T 22-04-2016 IPR011032 GroES-like RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 Pfam PF00107 Zinc-binding dehydrogenase 159 294 2.8E-20 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 PANTHER PTHR11695 24 337 4.7E-120 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 PANTHER PTHR11695:SF557 24 337 4.7E-120 T 22-04-2016 RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 1.1E-40 T 22-04-2016 RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 Gene3D G3DSA:3.40.50.720 142 304 6.8E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09255 9ec5be7e854b694a3e0e4247fab6d1ff 337 Gene3D G3DSA:3.90.180.10 3 141 6.4E-56 T 22-04-2016 IPR011032 GroES-like RMET_RS15880 9d84bfc7c538e2ac1fcf2c45dc45dde5 759 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 282 726 1.1E-70 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS15880 9d84bfc7c538e2ac1fcf2c45dc45dde5 759 SUPERFAMILY SSF81442 276 747 7.33E-80 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 PRINTS PR00125 ATP synthase delta subunit signature 77 88 8.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 8.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 PRINTS PR00125 ATP synthase delta subunit signature 88 102 8.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 8.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 180 20.308 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 PANTHER PTHR11910 7 178 5.0E-43 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 SUPERFAMILY SSF47928 3 108 2.88E-23 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 177 1.2E-41 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 Gene3D G3DSA:1.10.520.20 2 108 4.1E-27 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RMET_RS17575 1a359d4476e19b6c9967a5215bf0dea7 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 178 5.5E-52 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RMET_RS09635 e4cc3f934b8227316966f5963e9cb57c 127 Gene3D G3DSA:3.30.300.20 11 126 2.0E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS09635 e4cc3f934b8227316966f5963e9cb57c 127 Pfam PF02566 OsmC-like protein 35 124 2.0E-15 T 22-04-2016 IPR003718 OsmC/Ohr family RMET_RS09635 e4cc3f934b8227316966f5963e9cb57c 127 PANTHER PTHR39624:SF2 11 127 7.7E-25 T 22-04-2016 RMET_RS09635 e4cc3f934b8227316966f5963e9cb57c 127 SUPERFAMILY SSF82784 9 126 1.31E-30 T 22-04-2016 IPR003718 OsmC/Ohr family RMET_RS09635 e4cc3f934b8227316966f5963e9cb57c 127 PANTHER PTHR39624 11 127 7.7E-25 T 22-04-2016 RMET_RS17075 f42613f9440e45bf14464916fa3993e9 417 PANTHER PTHR11360 13 400 3.5E-59 T 22-04-2016 RMET_RS17075 f42613f9440e45bf14464916fa3993e9 417 SUPERFAMILY SSF103473 17 404 2.35E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS17075 f42613f9440e45bf14464916fa3993e9 417 Pfam PF07690 Major Facilitator Superfamily 33 368 3.5E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS17075 f42613f9440e45bf14464916fa3993e9 417 Gene3D G3DSA:1.20.1250.20 24 189 1.5E-11 T 22-04-2016 RMET_RS17075 f42613f9440e45bf14464916fa3993e9 417 Gene3D G3DSA:1.20.1250.20 227 405 1.1E-4 T 22-04-2016 RMET_RS17075 f42613f9440e45bf14464916fa3993e9 417 PANTHER PTHR11360:SF126 13 400 3.5E-59 T 22-04-2016 RMET_RS29955 4e244aaf893f4dde6b53777458ca959e 124 Pfam PF14403 Circularly permuted ATP-grasp type 2 61 124 1.8E-21 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 RMET_RS29955 4e244aaf893f4dde6b53777458ca959e 124 PANTHER PTHR34595 1 124 9.0E-42 T 22-04-2016 RMET_RS29955 4e244aaf893f4dde6b53777458ca959e 124 PANTHER PTHR34595:SF1 1 124 9.0E-42 T 22-04-2016 RMET_RS29955 4e244aaf893f4dde6b53777458ca959e 124 SUPERFAMILY SSF56059 44 107 6.71E-6 T 22-04-2016 RMET_RS13920 d8b993673f04a16c53bd5d4be2db68ed 301 Pfam PF02616 Segregation and condensation protein ScpA 81 296 1.5E-33 T 22-04-2016 IPR003768 Segregation and condensation protein A RMET_RS13920 d8b993673f04a16c53bd5d4be2db68ed 301 PANTHER PTHR33969:SF2 48 296 9.9E-76 T 22-04-2016 RMET_RS13920 d8b993673f04a16c53bd5d4be2db68ed 301 PANTHER PTHR33969 48 296 9.9E-76 T 22-04-2016 RMET_RS13920 d8b993673f04a16c53bd5d4be2db68ed 301 Hamap MF_01805 Segregation and condensation protein A [scpA]. 64 298 21.323 T 22-04-2016 IPR003768 Segregation and condensation protein A RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 Pfam PF00072 Response regulator receiver domain 19 135 1.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 PANTHER PTHR26402:SF458 17 223 6.5E-68 T 22-04-2016 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 SUPERFAMILY SSF52172 17 149 6.12E-32 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 SMART SM00421 160 217 7.1E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 PANTHER PTHR26402 17 223 6.5E-68 T 22-04-2016 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 SMART SM00448 17 134 4.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 SUPERFAMILY SSF46894 153 219 4.42E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 Gene3D G3DSA:3.40.50.2300 16 164 3.7E-35 T 22-04-2016 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 2.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 2.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 2.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 Gene3D G3DSA:1.10.10.10 165 219 1.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17965 234ffd6075f9011c7a891e12fecb44dd 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 217 6.4E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 PANTHER PTHR21262 62 804 0.0 T 22-04-2016 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 110 799 1.7E-219 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 PANTHER PTHR21262:SF0 62 804 0.0 T 22-04-2016 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 Pfam PF04607 Region found in RelA / SpoT proteins 319 429 5.6E-33 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 SUPERFAMILY SSF81301 276 449 5.23E-59 T 22-04-2016 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 SMART SM00471 125 237 5.8E-10 T 22-04-2016 IPR003607 HD/PDEase domain RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 Pfam PF02824 TGS domain 472 531 6.9E-19 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 SUPERFAMILY SSF109604 95 272 2.57E-70 T 22-04-2016 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 Gene3D G3DSA:3.10.20.30 472 532 2.0E-20 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 Pfam PF13328 HD domain 110 259 1.3E-50 T 22-04-2016 IPR003607 HD/PDEase domain RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 SMART SM00954 319 429 1.7E-58 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 Gene3D G3DSA:3.30.70.260 724 798 2.6E-7 T 22-04-2016 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 Gene3D G3DSA:3.30.460.10 278 409 1.0E-43 T 22-04-2016 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 Pfam PF13291 ACT domain 721 801 8.1E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 SUPERFAMILY SSF81271 459 531 3.27E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RMET_RS04310 34ef15da4412a396fa56807eb7773d8b 806 SUPERFAMILY SSF55021 723 801 7.63E-8 T 22-04-2016 RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 SMART SM00248 92 122 1.5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 SMART SM00248 156 185 2.1E-6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 SMART SM00248 58 88 2200.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 SMART SM00248 123 152 2.6E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 Gene3D G3DSA:1.25.40.20 100 210 1.4E-34 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 SUPERFAMILY SSF48403 32 211 5.29E-44 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 Gene3D G3DSA:1.25.40.20 33 99 6.0E-13 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 Pfam PF12796 Ankyrin repeats (3 copies) 119 187 1.9E-18 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 PANTHER PTHR24198 33 212 3.5E-43 T 22-04-2016 RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 PRINTS PR01415 Ankyrin repeat signature 172 186 6.6E-8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS09130 ff32fe9f8effc53e8f754a91e3bbf932 238 PRINTS PR01415 Ankyrin repeat signature 124 139 6.6E-8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RMET_RS13325 94a6f9918c7442968446d65ce0261fbe 299 Pfam PF03301 Tryptophan 2,3-dioxygenase 33 297 1.9E-65 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RMET_RS13325 94a6f9918c7442968446d65ce0261fbe 299 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 36 299 41.367 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RMET_RS13325 94a6f9918c7442968446d65ce0261fbe 299 PANTHER PTHR10138:SF0 6 299 3.4E-106 T 22-04-2016 RMET_RS13325 94a6f9918c7442968446d65ce0261fbe 299 PANTHER PTHR10138 6 299 3.4E-106 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RMET_RS13325 94a6f9918c7442968446d65ce0261fbe 299 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 36 299 2.0E-138 T 22-04-2016 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RMET_RS13325 94a6f9918c7442968446d65ce0261fbe 299 SUPERFAMILY SSF140959 42 298 7.19E-103 T 22-04-2016 RMET_RS08885 4990af04e10bc73bb4ab4540d0e018fc 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08885 4990af04e10bc73bb4ab4540d0e018fc 314 Gene3D G3DSA:1.10.10.10 3 84 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08885 4990af04e10bc73bb4ab4540d0e018fc 314 SUPERFAMILY SSF46785 3 85 1.18E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08885 4990af04e10bc73bb4ab4540d0e018fc 314 Gene3D G3DSA:3.40.190.10 94 197 7.1E-23 T 22-04-2016 RMET_RS08885 4990af04e10bc73bb4ab4540d0e018fc 314 PANTHER PTHR30537:SF26 1 305 2.1E-69 T 22-04-2016 RMET_RS08885 4990af04e10bc73bb4ab4540d0e018fc 314 Pfam PF03466 LysR substrate binding domain 90 303 5.4E-30 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS08885 4990af04e10bc73bb4ab4540d0e018fc 314 SUPERFAMILY SSF53850 90 307 6.15E-31 T 22-04-2016 RMET_RS08885 4990af04e10bc73bb4ab4540d0e018fc 314 PANTHER PTHR30537 1 305 2.1E-69 T 22-04-2016 RMET_RS17245 49f4cc0e24d7268da6aa6f47c946f498 217 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 75 169 8.7E-41 T 22-04-2016 IPR012997 Rare lipoprotein A RMET_RS17245 49f4cc0e24d7268da6aa6f47c946f498 217 PANTHER PTHR34183 67 169 9.0E-52 T 22-04-2016 RMET_RS17245 49f4cc0e24d7268da6aa6f47c946f498 217 Pfam PF03330 Lytic transglycolase 73 162 9.3E-26 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RMET_RS17245 49f4cc0e24d7268da6aa6f47c946f498 217 SUPERFAMILY SSF50685 75 163 1.05E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RMET_RS17245 49f4cc0e24d7268da6aa6f47c946f498 217 PANTHER PTHR34183:SF1 67 169 9.0E-52 T 22-04-2016 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 Gene3D G3DSA:3.90.780.10 398 521 3.3E-15 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 PANTHER PTHR11575 19 521 1.3E-167 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 SUPERFAMILY SSF56300 39 60 2.74E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 SUPERFAMILY SSF56300 114 378 2.74E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 Gene3D G3DSA:3.60.21.10 114 378 1.3E-76 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 Gene3D G3DSA:3.60.21.10 41 60 1.3E-76 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 2 564 1.7E-269 T 22-04-2016 IPR030998 Thiosulfohydrolase SoxB RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 SUPERFAMILY SSF55816 377 558 9.55E-30 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 PANTHER PTHR11575:SF16 19 521 1.3E-167 T 22-04-2016 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 Pfam PF02872 5'-nucleotidase, C-terminal domain 397 521 3.9E-13 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 PRINTS PR01607 Apyrase family signature 285 308 1.1E-10 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 PRINTS PR01607 Apyrase family signature 266 283 1.1E-10 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 PRINTS PR01607 Apyrase family signature 317 337 1.1E-10 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS17170 30b176ab00cd1b1c9b8ee2c06423d35f 574 PRINTS PR01607 Apyrase family signature 41 59 1.1E-10 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 8 266 4.3E-76 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 PANTHER PTHR11645 1 273 5.3E-95 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 PANTHER PTHR11645:SF0 1 273 5.3E-95 T 22-04-2016 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 221 244 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 SUPERFAMILY SSF48179 162 269 1.29E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 SUPERFAMILY SSF51735 7 159 1.18E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 PIRSF PIRSF000193 5 269 2.1E-73 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 Gene3D G3DSA:1.10.3730.10 162 266 1.2E-34 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 266 2.5E-33 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 Gene3D G3DSA:3.40.50.720 4 159 5.2E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 99 2.2E-17 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RMET_RS14725 d0fddb9ad3e64f7191aaffc08fde439a 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 266 26.331 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RMET_RS07450 cf29458b5f24142f9917c560c5ac17a4 340 Pfam PF16263 Domain of unknown function (DUF4917) 20 328 1.4E-160 T 22-04-2016 IPR032581 Protein of unknown function DUF4917 RMET_RS10605 45cc08e320ae6583e467e9de37679b8b 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 237 2.5E-64 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RMET_RS10605 45cc08e320ae6583e467e9de37679b8b 250 Gene3D G3DSA:3.40.1210.10 1 249 3.5E-86 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RMET_RS10605 45cc08e320ae6583e467e9de37679b8b 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 37.534 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RMET_RS10605 45cc08e320ae6583e467e9de37679b8b 250 SUPERFAMILY SSF64167 1 249 4.05E-85 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RMET_RS10605 45cc08e320ae6583e467e9de37679b8b 250 Pfam PF01975 Survival protein SurE 3 186 1.3E-56 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RMET_RS10605 45cc08e320ae6583e467e9de37679b8b 250 PANTHER PTHR30457 1 249 6.7E-88 T 22-04-2016 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 PANTHER PTHR22807:SF30 135 456 3.6E-76 T 22-04-2016 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 16 457 8.5E-91 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 Gene3D G3DSA:1.10.287.730 167 191 2.2E-5 T 22-04-2016 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 Gene3D G3DSA:1.10.940.10 15 166 8.1E-12 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 Gene3D G3DSA:3.30.70.1170 192 247 1.7E-19 T 22-04-2016 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 SUPERFAMILY SSF48013 23 168 7.19E-13 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 PANTHER PTHR22807 135 456 3.6E-76 T 22-04-2016 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 Pfam PF01189 16S rRNA methyltransferase RsmB/F 262 454 1.9E-50 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 SUPERFAMILY SSF53335 159 456 8.74E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 Gene3D G3DSA:3.40.50.150 249 455 5.6E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 383 399 7.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 268 278 7.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 333 345 7.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 253 7.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 438 455 7.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS17895 e750fa1897d63c2488dab1f8fade5534 457 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 332 343 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 Pfam PF00696 Amino acid kinase family 3 229 8.0E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 SUPERFAMILY SSF53633 4 250 9.69E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 Gene3D G3DSA:3.40.1160.10 1 254 1.7E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 PANTHER PTHR21499:SF27 1 415 1.4E-163 T 22-04-2016 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 4.1E-113 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 SUPERFAMILY SSF55021 340 414 2.98E-25 T 22-04-2016 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 Pfam PF13840 ACT domain 348 409 1.6E-17 T 22-04-2016 IPR027795 GATS-like ACT domain RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 SUPERFAMILY SSF55021 257 335 1.7E-18 T 22-04-2016 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 4.4E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 4.4E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 PIRSF PIRSF000726 57 416 2.2E-138 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 Pfam PF01842 ACT domain 276 333 1.6E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 PANTHER PTHR21499 1 415 1.4E-163 T 22-04-2016 RMET_RS05475 8ecc6ba73e2c1d0c6c992f22bb2155bb 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 5.4E-126 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 2.2E-73 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 PANTHER PTHR21327:SF6 1 370 1.6E-138 T 22-04-2016 RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 Gene3D G3DSA:3.90.870.10 1 211 2.2E-98 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.1E-81 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 PANTHER PTHR21327 1 370 1.6E-138 T 22-04-2016 RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.625 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 SUPERFAMILY SSF142695 204 364 2.22E-44 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 PIRSF PIRSF001259 1 371 5.1E-115 T 22-04-2016 RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 SUPERFAMILY SSF55821 2 202 7.33E-86 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RMET_RS13520 d90800a97d996e2abd70a87c04b4a76a 371 Pfam PF00925 GTP cyclohydrolase II 207 360 2.8E-31 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 SUPERFAMILY SSF52096 21 243 3.32E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 TIGRFAM TIGR03222 benzo_boxC: benzoyl-CoA-dihydrodiol lyase 13 558 1.9E-301 T 22-04-2016 IPR017633 Benzoyl-CoA-dihydrodiol lyase MetaCyc: PWY-1361 RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 Gene3D G3DSA:3.90.226.10 307 490 2.3E-5 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 PANTHER PTHR11941 10 224 1.4E-31 T 22-04-2016 RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 PANTHER PTHR11941 478 515 1.4E-31 T 22-04-2016 RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 SUPERFAMILY SSF52096 267 553 5.27E-12 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 PANTHER PTHR11941:SF54 10 224 1.4E-31 T 22-04-2016 RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 PANTHER PTHR11941:SF54 478 515 1.4E-31 T 22-04-2016 RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 Gene3D G3DSA:3.90.226.10 13 242 2.2E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS06170 1dc2eb06b2ca409a8c6a1c1da2bac832 558 Pfam PF00378 Enoyl-CoA hydratase/isomerase 54 243 3.0E-24 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS12490 9867372d6863f0bcbef32290e9ba6e7f 326 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 46 252 6.1E-14 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RMET_RS12490 9867372d6863f0bcbef32290e9ba6e7f 326 PANTHER PTHR11105 17 325 1.5E-41 T 22-04-2016 RMET_RS12490 9867372d6863f0bcbef32290e9ba6e7f 326 Gene3D G3DSA:3.20.20.60 24 262 2.2E-46 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS12490 9867372d6863f0bcbef32290e9ba6e7f 326 SUPERFAMILY SSF51621 25 262 1.36E-41 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS12490 9867372d6863f0bcbef32290e9ba6e7f 326 PIRSF PIRSF015582 34 318 2.7E-44 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like RMET_RS24925 81c2f0a3bef3084ebb524d0061835566 71 Pfam PF01418 Helix-turn-helix domain, rpiR family 23 69 7.2E-5 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RMET_RS24925 81c2f0a3bef3084ebb524d0061835566 71 Gene3D G3DSA:1.10.10.10 22 70 1.8E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS24925 81c2f0a3bef3084ebb524d0061835566 71 SUPERFAMILY SSF46689 23 69 1.56E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 PANTHER PTHR30136:SF8 13 265 6.2E-59 T 22-04-2016 RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 SUPERFAMILY SSF46785 16 89 9.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 Gene3D G3DSA:1.10.10.10 10 84 4.9E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 SUPERFAMILY SSF55781 81 261 7.19E-31 T 22-04-2016 IPR029016 GAF domain-like RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 Pfam PF01614 Bacterial transcriptional regulator 136 258 5.4E-11 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 Gene3D G3DSA:3.30.450.40 89 263 8.3E-39 T 22-04-2016 IPR029016 GAF domain-like RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 Pfam PF09339 IclR helix-turn-helix domain 18 68 6.1E-8 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 SMART SM00346 16 105 0.0024 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS01705 8fe6a6f894a7501b85d88f85777d40b1 268 PANTHER PTHR30136 13 265 6.2E-59 T 22-04-2016 RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 SUPERFAMILY SSF52540 2 271 1.28E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 Pfam PF06418 CTP synthase N-terminus 3 270 1.2E-124 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 Gene3D G3DSA:3.40.50.880 291 545 1.1E-96 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 Hamap MF_01227 CTP synthase [pyrG]. 2 545 50.976 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 SUPERFAMILY SSF52317 292 545 9.91E-85 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 TIGRFAM TIGR00337 PyrG: CTP synthase 1 540 4.5E-239 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 Gene3D G3DSA:3.40.50.300 1 287 2.9E-132 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 Pfam PF00117 Glutamine amidotransferase class-I 305 539 2.9E-56 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RMET_RS05290 086e20dd6dabf465840493c1ba55da87 549 PANTHER PTHR11550 1 547 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RMET_RS06635 70bd885a902e085bb226c027440cd43c 88 SUPERFAMILY SSF110814 3 84 1.07E-36 T 22-04-2016 IPR009355 Toluene-4-monooxygenase system B KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00273 RMET_RS06635 70bd885a902e085bb226c027440cd43c 88 Pfam PF06234 Toluene-4-monooxygenase system protein B (TmoB) 3 83 1.2E-36 T 22-04-2016 IPR009355 Toluene-4-monooxygenase system B KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00273 RMET_RS06635 70bd885a902e085bb226c027440cd43c 88 Gene3D G3DSA:3.10.20.270 1 84 9.9E-42 T 22-04-2016 IPR009355 Toluene-4-monooxygenase system B KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00273 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 SMART SM00926 43 105 1.6E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.6E-16 T 22-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 SUPERFAMILY SSF50692 1076 1234 4.75E-46 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Pfam PF01568 Molydopterin dinucleotide binding domain 1085 1199 2.3E-21 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Gene3D G3DSA:3.40.50.740 652 830 9.2E-68 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Gene3D G3DSA:3.40.50.740 108 223 9.2E-68 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Gene3D G3DSA:4.10.1200.10 1 27 1.1E-8 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Gene3D G3DSA:2.20.25.90 52 98 3.5E-32 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 SUPERFAMILY SSF53706 4 1066 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 PANTHER PTHR11615:SF165 848 873 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 PANTHER PTHR11615:SF165 34 412 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 PANTHER PTHR11615:SF165 992 1226 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 PANTHER PTHR11615:SF165 697 832 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Gene3D G3DSA:3.40.228.10 224 336 2.3E-85 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Gene3D G3DSA:3.40.228.10 492 610 2.3E-85 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Gene3D G3DSA:2.40.40.20 1052 1231 7.2E-40 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1232 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 PANTHER PTHR11615 848 873 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 PANTHER PTHR11615 34 412 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 PANTHER PTHR11615 992 1226 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 PANTHER PTHR11615 697 832 0.0 T 22-04-2016 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1122 1149 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RMET_RS10375 f5747e9d8eac60d03712aa39b3686ecf 1252 Pfam PF00384 Molybdopterin oxidoreductase 108 828 2.6E-157 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS07665 22bc22824f314da7367905e6a08ab11a 191 PANTHER PTHR11995 146 179 2.3E-40 T 22-04-2016 RMET_RS07665 22bc22824f314da7367905e6a08ab11a 191 PANTHER PTHR11995 1 110 2.3E-40 T 22-04-2016 RMET_RS07665 22bc22824f314da7367905e6a08ab11a 191 Gene3D G3DSA:3.40.50.700 11 183 2.7E-26 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RMET_RS07665 22bc22824f314da7367905e6a08ab11a 191 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 23 174 3.5E-29 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RMET_RS07665 22bc22824f314da7367905e6a08ab11a 191 PANTHER PTHR11995:SF6 146 179 2.3E-40 T 22-04-2016 RMET_RS07665 22bc22824f314da7367905e6a08ab11a 191 PANTHER PTHR11995:SF6 1 110 2.3E-40 T 22-04-2016 RMET_RS07665 22bc22824f314da7367905e6a08ab11a 191 SUPERFAMILY SSF56770 12 106 1.96E-36 T 22-04-2016 RMET_RS07665 22bc22824f314da7367905e6a08ab11a 191 SUPERFAMILY SSF56770 135 182 1.96E-36 T 22-04-2016 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 PANTHER PTHR30346:SF0 1 303 5.5E-88 T 22-04-2016 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 Gene3D G3DSA:1.10.10.10 1 77 2.0E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 SUPERFAMILY SSF46785 2 84 1.04E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 PANTHER PTHR30346 1 303 5.5E-88 T 22-04-2016 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 Gene3D G3DSA:3.40.190.10 88 173 1.6E-29 T 22-04-2016 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 SUPERFAMILY SSF53850 90 303 9.19E-36 T 22-04-2016 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 Pfam PF03466 LysR substrate binding domain 87 301 1.3E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 Gene3D G3DSA:3.40.190.10 174 275 3.0E-42 T 22-04-2016 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14065 0a2b7be885c40277d77ca79812766735 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09075 2e8e2622ba3f6113c53df0866152d956 406 PANTHER PTHR24023 76 393 3.0E-24 T 22-04-2016 RMET_RS09075 2e8e2622ba3f6113c53df0866152d956 406 Gene3D G3DSA:3.40.50.10540 8 226 6.9E-96 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS09075 2e8e2622ba3f6113c53df0866152d956 406 Gene3D G3DSA:3.40.50.10540 316 406 6.9E-96 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS09075 2e8e2622ba3f6113c53df0866152d956 406 PANTHER PTHR24023:SF593 76 393 3.0E-24 T 22-04-2016 RMET_RS09075 2e8e2622ba3f6113c53df0866152d956 406 Gene3D G3DSA:3.30.1540.10 232 315 5.7E-28 T 22-04-2016 RMET_RS09075 2e8e2622ba3f6113c53df0866152d956 406 Pfam PF02515 CoA-transferase family III 12 383 8.6E-113 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS09075 2e8e2622ba3f6113c53df0866152d956 406 SUPERFAMILY SSF89796 10 406 1.44E-121 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS09585 6aab56b897bcc80097f178a5476b5842 188 Gene3D G3DSA:3.30.70.900 14 94 4.7E-13 T 22-04-2016 RMET_RS09585 6aab56b897bcc80097f178a5476b5842 188 PANTHER PTHR40057 1 187 9.9E-36 T 22-04-2016 RMET_RS09585 6aab56b897bcc80097f178a5476b5842 188 PANTHER PTHR40057:SF1 1 187 9.9E-36 T 22-04-2016 RMET_RS09585 6aab56b897bcc80097f178a5476b5842 188 SUPERFAMILY SSF54909 3 101 2.42E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS09585 6aab56b897bcc80097f178a5476b5842 188 Pfam PF03992 Antibiotic biosynthesis monooxygenase 12 84 4.6E-6 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 175 2.2E-42 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 Gene3D G3DSA:2.40.240.10 2 93 1.8E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 PANTHER PTHR33284 5 199 2.1E-60 T 22-04-2016 RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 93 21.407 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 SUPERFAMILY SSF50715 2 192 3.49E-54 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 185 5.1E-30 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 Gene3D G3DSA:2.170.120.20 96 192 1.6E-30 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 4.0E-49 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 Pfam PF01386 Ribosomal L25p family 5 90 9.5E-23 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RMET_RS01465 12dc0d163c199370d813fd47d707cb78 203 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 30.619 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RMET_RS13710 30a2aa9c92633f736a49ee76b84a02a0 184 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 177 2.5E-76 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RMET_RS13710 30a2aa9c92633f736a49ee76b84a02a0 184 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 5 184 1.0E-102 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RMET_RS13710 30a2aa9c92633f736a49ee76b84a02a0 184 Gene3D G3DSA:2.60.120.10 4 181 2.7E-84 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS13710 30a2aa9c92633f736a49ee76b84a02a0 184 PANTHER PTHR21047 1 183 1.8E-77 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RMET_RS13710 30a2aa9c92633f736a49ee76b84a02a0 184 SUPERFAMILY SSF51182 3 181 7.42E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS13710 30a2aa9c92633f736a49ee76b84a02a0 184 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 180 4.6E-85 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RMET_RS09345 89b7ab7159bf1578d41fc1378ea2eed7 179 Pfam PF04279 Intracellular septation protein A 1 175 2.2E-72 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RMET_RS09345 89b7ab7159bf1578d41fc1378ea2eed7 179 PANTHER PTHR36917 1 175 2.2E-59 T 22-04-2016 RMET_RS09345 89b7ab7159bf1578d41fc1378ea2eed7 179 PANTHER PTHR36917:SF1 1 175 2.2E-59 T 22-04-2016 RMET_RS09345 89b7ab7159bf1578d41fc1378ea2eed7 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.037 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RMET_RS09345 89b7ab7159bf1578d41fc1378ea2eed7 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 5.8E-59 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 151 587 7.4E-156 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 Gene3D G3DSA:3.90.1150.10 459 630 3.1E-68 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 SUPERFAMILY SSF55904 609 754 1.28E-45 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 Gene3D G3DSA:3.90.100.10 631 754 1.6E-35 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 PANTHER PTHR11751:SF406 526 534 2.9E-142 T 22-04-2016 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 PANTHER PTHR11751:SF406 554 674 2.9E-142 T 22-04-2016 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 PANTHER PTHR11751:SF406 152 498 2.9E-142 T 22-04-2016 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 SUPERFAMILY SSF53383 151 607 1.42E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 PIRSF PIRSF009393 1 754 4.0E-290 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 145 2.4E-38 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 PANTHER PTHR11751 526 534 2.9E-142 T 22-04-2016 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 PANTHER PTHR11751 554 674 2.9E-142 T 22-04-2016 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 PANTHER PTHR11751 152 498 2.9E-142 T 22-04-2016 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 Gene3D G3DSA:3.40.640.10 151 456 7.2E-114 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 614 739 9.9E-47 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RMET_RS13820 937d28c8f161c3b5c9bc754de8c2cca4 754 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 392 406 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RMET_RS14395 30a3be0cbd4b70822e90504c5ead4fee 56 Pfam PF00471 Ribosomal protein L33 9 54 1.6E-17 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14395 30a3be0cbd4b70822e90504c5ead4fee 56 PANTHER PTHR15238 1 56 3.7E-21 T 22-04-2016 RMET_RS14395 30a3be0cbd4b70822e90504c5ead4fee 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.429 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14395 30a3be0cbd4b70822e90504c5ead4fee 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 2.9E-26 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14395 30a3be0cbd4b70822e90504c5ead4fee 56 SUPERFAMILY SSF57829 3 54 6.71E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RMET_RS14395 30a3be0cbd4b70822e90504c5ead4fee 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS00375 5d7e25e0457d8dd7b2a68a6f0ee5c859 376 PANTHER PTHR30188:SF3 42 375 4.6E-87 T 22-04-2016 RMET_RS00375 5d7e25e0457d8dd7b2a68a6f0ee5c859 376 PANTHER PTHR30188 42 375 4.6E-87 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RMET_RS00375 5d7e25e0457d8dd7b2a68a6f0ee5c859 376 Pfam PF02405 Permease MlaE 161 369 3.7E-68 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RMET_RS00375 5d7e25e0457d8dd7b2a68a6f0ee5c859 376 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 126 372 1.2E-66 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RMET_RS12200 f61b6c907abb02836db676d34c5fdd55 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.833 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RMET_RS12200 f61b6c907abb02836db676d34c5fdd55 59 Pfam PF01783 Ribosomal L32p protein family 2 55 8.8E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RMET_RS12200 f61b6c907abb02836db676d34c5fdd55 59 PANTHER PTHR35534 1 59 1.8E-24 T 22-04-2016 RMET_RS12200 f61b6c907abb02836db676d34c5fdd55 59 SUPERFAMILY SSF57829 2 55 1.46E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RMET_RS12200 f61b6c907abb02836db676d34c5fdd55 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.9E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 121 1.1E-48 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 PRINTS PR01165 Cytochrome c oxidase subunit I signature 44 59 1.1E-48 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 PRINTS PR01165 Cytochrome c oxidase subunit I signature 131 150 1.1E-48 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 PRINTS PR01165 Cytochrome c oxidase subunit I signature 181 202 1.1E-48 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 PRINTS PR01165 Cytochrome c oxidase subunit I signature 68 89 1.1E-48 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 1 221 4.8E-86 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 Gene3D G3DSA:1.20.210.10 1 236 5.9E-107 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 PANTHER PTHR10422:SF27 1 236 1.4E-147 T 22-04-2016 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 SUPERFAMILY SSF81442 1 243 4.58E-95 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS19415 cb871381273bc93b1e18719895b5a82d 247 PANTHER PTHR10422 1 236 1.4E-147 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS12715 4712d46bd00047197204f1cc20e3ae23 373 SUPERFAMILY SSF89796 1 358 1.14E-110 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS12715 4712d46bd00047197204f1cc20e3ae23 373 PANTHER PTHR24023:SF591 23 362 1.8E-78 T 22-04-2016 RMET_RS12715 4712d46bd00047197204f1cc20e3ae23 373 Gene3D G3DSA:3.40.50.10540 1 204 8.1E-91 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS12715 4712d46bd00047197204f1cc20e3ae23 373 Gene3D G3DSA:3.40.50.10540 290 357 8.1E-91 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS12715 4712d46bd00047197204f1cc20e3ae23 373 Gene3D G3DSA:3.30.1540.10 212 289 1.5E-14 T 22-04-2016 RMET_RS12715 4712d46bd00047197204f1cc20e3ae23 373 Pfam PF02515 CoA-transferase family III 2 351 8.7E-89 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS12715 4712d46bd00047197204f1cc20e3ae23 373 PANTHER PTHR24023 23 362 1.8E-78 T 22-04-2016 RMET_RS04010 93c3bc4234849427534ea32b8afb86b1 316 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 45 311 5.5E-61 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RMET_RS04010 93c3bc4234849427534ea32b8afb86b1 316 PANTHER PTHR30177 42 316 1.3E-94 T 22-04-2016 RMET_RS04010 93c3bc4234849427534ea32b8afb86b1 316 Gene3D G3DSA:3.40.190.10 252 316 2.1E-17 T 22-04-2016 RMET_RS04010 93c3bc4234849427534ea32b8afb86b1 316 Gene3D G3DSA:3.40.190.10 42 153 1.9E-36 T 22-04-2016 RMET_RS04010 93c3bc4234849427534ea32b8afb86b1 316 Gene3D G3DSA:3.40.190.120 154 251 8.6E-28 T 22-04-2016 RMET_RS04010 93c3bc4234849427534ea32b8afb86b1 316 PANTHER PTHR30177:SF9 42 316 1.3E-94 T 22-04-2016 RMET_RS04010 93c3bc4234849427534ea32b8afb86b1 316 SUPERFAMILY SSF53850 45 315 5.44E-66 T 22-04-2016 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 PIRSF PIRSF004750 1 277 1.2E-125 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 Gene3D G3DSA:3.30.1130.10 140 276 6.1E-55 T 22-04-2016 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 TIGRFAM TIGR03138 QueF: queuine synthase 4 277 8.9E-123 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 126 4.3E-47 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 277 158.475 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 Gene3D G3DSA:3.30.1130.10 15 132 4.5E-42 T 22-04-2016 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 SUPERFAMILY SSF55620 181 262 5.71E-9 T 22-04-2016 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 PANTHER PTHR34354:SF1 1 277 3.0E-88 T 22-04-2016 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 PANTHER PTHR34354 1 277 3.0E-88 T 22-04-2016 RMET_RS01790 2c89ed2a84d7c581b7370982b6e6c554 277 Pfam PF14489 QueF-like protein 190 265 5.1E-28 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 SUPERFAMILY SSF52210 306 455 1.96E-25 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 Pfam PF13380 CoA binding domain 13 137 1.5E-21 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 Gene3D G3DSA:3.40.50.720 3 132 4.1E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 SUPERFAMILY SSF52210 152 296 3.66E-33 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 Pfam PF13549 ATP-grasp domain 484 695 1.7E-58 T 22-04-2016 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 PANTHER PTHR33303 5 696 3.5E-176 T 22-04-2016 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 160 297 4.9E-44 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 SMART SM00881 8 103 2.1E-32 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 SUPERFAMILY SSF51735 3 140 3.57E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 SUPERFAMILY SSF56059 483 696 5.74E-40 T 22-04-2016 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 Gene3D G3DSA:3.40.50.261 133 295 2.1E-23 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 Gene3D G3DSA:3.30.470.20 481 592 1.1E-5 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS04220 af395c8deb01131e60dcebebefff0b3e 700 PANTHER PTHR33303:SF3 5 696 3.5E-176 T 22-04-2016 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 SUPERFAMILY SSF46785 2 110 2.04E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 SUPERFAMILY SSF50331 200 266 4.86E-20 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 199 265 2.5E-19 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 127 194 1.0E-22 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 Pfam PF03459 TOBE domain 202 264 3.1E-16 T 22-04-2016 IPR005116 Transport-associated OB, type 1 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 Pfam PF03459 TOBE domain 129 192 5.7E-16 T 22-04-2016 IPR005116 Transport-associated OB, type 1 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 Gene3D G3DSA:2.40.50.100 130 195 9.7E-30 T 22-04-2016 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 Gene3D G3DSA:2.40.50.100 199 266 4.0E-28 T 22-04-2016 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 Gene3D G3DSA:1.10.10.10 2 129 1.0E-43 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 19 104 4.8E-31 T 22-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 PIRSF PIRSF005763 1 268 1.9E-95 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 SUPERFAMILY SSF50331 128 196 1.19E-20 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 PANTHER PTHR30432 2 268 6.1E-54 T 22-04-2016 RMET_RS02865 a7c8d4ff35fb1a4c4aa614e9522baa5b 268 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 84 2.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17515 c3bd3cbe948ea4c9c3b1807149794a64 372 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 1.7E-57 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RMET_RS17515 c3bd3cbe948ea4c9c3b1807149794a64 372 PANTHER PTHR36510 1 369 3.9E-125 T 22-04-2016 RMET_RS17515 c3bd3cbe948ea4c9c3b1807149794a64 372 PANTHER PTHR36510:SF1 1 369 3.9E-125 T 22-04-2016 RMET_RS17515 c3bd3cbe948ea4c9c3b1807149794a64 372 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 297 5.9E-106 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RMET_RS17515 c3bd3cbe948ea4c9c3b1807149794a64 372 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 372 102.757 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RMET_RS17515 c3bd3cbe948ea4c9c3b1807149794a64 372 SUPERFAMILY SSF55931 4 369 2.0E-116 T 22-04-2016 RMET_RS04125 21e001f8d233f3ce913ab7fcf1db666f 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 321 6.6E-94 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04125 21e001f8d233f3ce913ab7fcf1db666f 325 PIRSF PIRSF017082 1 324 1.6E-84 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04125 21e001f8d233f3ce913ab7fcf1db666f 325 PANTHER PTHR30349 15 287 8.4E-101 T 22-04-2016 RMET_RS04125 21e001f8d233f3ce913ab7fcf1db666f 325 SUPERFAMILY SSF53850 112 290 4.99E-13 T 22-04-2016 RMET_RS04125 21e001f8d233f3ce913ab7fcf1db666f 325 PANTHER PTHR30349:SF16 15 287 8.4E-101 T 22-04-2016 RMET_RS04170 92c54d6a7741edf0928b2bbd8f0c0da4 525 PANTHER PTHR11699 1 520 9.0E-143 T 22-04-2016 RMET_RS04170 92c54d6a7741edf0928b2bbd8f0c0da4 525 Gene3D G3DSA:3.40.309.10 267 455 3.5E-51 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS04170 92c54d6a7741edf0928b2bbd8f0c0da4 525 PANTHER PTHR11699:SF10 1 520 9.0E-143 T 22-04-2016 RMET_RS04170 92c54d6a7741edf0928b2bbd8f0c0da4 525 SUPERFAMILY SSF53720 18 518 3.01E-101 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS04170 92c54d6a7741edf0928b2bbd8f0c0da4 525 Pfam PF00171 Aldehyde dehydrogenase family 16 460 3.6E-49 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS04170 92c54d6a7741edf0928b2bbd8f0c0da4 525 Gene3D G3DSA:3.40.605.10 5 265 4.2E-50 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 Gene3D G3DSA:2.40.10.10 40 179 3.8E-40 T 22-04-2016 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 SUPERFAMILY SSF50156 246 371 6.31E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PANTHER PTHR22939:SF98 38 62 2.3E-128 T 22-04-2016 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PANTHER PTHR22939:SF98 100 383 2.3E-128 T 22-04-2016 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PANTHER PTHR22939 38 62 2.3E-128 T 22-04-2016 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PANTHER PTHR22939 100 383 2.3E-128 T 22-04-2016 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 Pfam PF13365 Trypsin-like peptidase domain 118 249 4.5E-35 T 22-04-2016 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 Gene3D G3DSA:2.40.10.10 180 289 1.5E-42 T 22-04-2016 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 Gene3D G3DSA:2.30.42.10 290 384 2.0E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 Gene3D G3DSA:2.30.42.10 412 498 3.3E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 494 5.7E-153 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 Pfam PF13180 PDZ domain 432 493 1.3E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 Pfam PF13180 PDZ domain 298 379 1.0E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 SUPERFAMILY SSF50494 39 279 8.65E-67 T 22-04-2016 IPR009003 Peptidase S1, PA clan RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 SUPERFAMILY SSF50156 411 498 1.84E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 4.7E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 4.7E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 4.7E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 4.7E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 4.7E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 PRINTS PR00834 HtrA/DegQ protease family signature 242 259 4.7E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 SMART SM00228 259 370 2.9E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS12150 be4633e8ab6673d876feb08bf64591de 501 SMART SM00228 410 488 0.0036 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS01265 402eed129a7325de070b72634cd5764a 250 SUPERFAMILY SSF69572 2 247 1.83E-85 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RMET_RS01265 402eed129a7325de070b72634cd5764a 250 Gene3D G3DSA:3.40.50.720 3 247 5.3E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01265 402eed129a7325de070b72634cd5764a 250 PANTHER PTHR10953 1 247 1.1E-88 T 22-04-2016 RMET_RS01265 402eed129a7325de070b72634cd5764a 250 Pfam PF00899 ThiF family 9 243 1.8E-64 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RMET_RS01265 402eed129a7325de070b72634cd5764a 250 PANTHER PTHR10953:SF158 1 247 1.1E-88 T 22-04-2016 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 Pfam PF00672 HAMP domain 185 251 4.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 PANTHER PTHR24423 198 479 3.9E-63 T 22-04-2016 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 PANTHER PTHR24423 95 133 3.9E-63 T 22-04-2016 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 6.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 6.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 6.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 6.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 SMART SM00388 255 320 4.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 478 6.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 SUPERFAMILY SSF55874 310 479 1.06E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 SMART SM00387 368 481 7.3E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 Gene3D G3DSA:1.10.287.130 258 315 8.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 SUPERFAMILY SSF47384 253 319 2.75E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 SMART SM00304 204 255 0.0018 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 2.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 SUPERFAMILY SSF103190 93 178 4.71E-10 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RMET_RS08305 246b2219ea4e389809232f92ca7b248d 481 Gene3D G3DSA:3.30.565.10 325 479 3.5E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS04545 243c98aea2a25c804fd91fd65ee545f3 194 Pfam PF03641 Possible lysine decarboxylase 46 175 2.6E-43 T 22-04-2016 IPR031100 LOG family RMET_RS04545 243c98aea2a25c804fd91fd65ee545f3 194 PANTHER PTHR31223 1 189 4.0E-89 T 22-04-2016 RMET_RS04545 243c98aea2a25c804fd91fd65ee545f3 194 PANTHER PTHR31223:SF0 1 189 4.0E-89 T 22-04-2016 RMET_RS04545 243c98aea2a25c804fd91fd65ee545f3 194 SUPERFAMILY SSF102405 2 176 6.87E-64 T 22-04-2016 RMET_RS04545 243c98aea2a25c804fd91fd65ee545f3 194 Gene3D G3DSA:3.40.50.450 2 186 5.2E-74 T 22-04-2016 RMET_RS04545 243c98aea2a25c804fd91fd65ee545f3 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 177 1.7E-68 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 Gene3D G3DSA:1.10.760.10 333 441 4.9E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 PIRSF PIRSF000018 9 449 3.8E-157 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 SUPERFAMILY SSF46626 193 305 1.67E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 SUPERFAMILY SSF46626 333 437 2.95E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 Pfam PF00034 Cytochrome c 196 305 2.1E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 Pfam PF00034 Cytochrome c 50 148 4.3E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 SUPERFAMILY SSF46626 43 171 1.91E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 PANTHER PTHR35008 45 444 2.1E-175 T 22-04-2016 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 PANTHER PTHR35008:SF3 45 444 2.1E-175 T 22-04-2016 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 Gene3D G3DSA:1.10.760.10 46 148 2.2E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 Gene3D G3DSA:1.10.760.10 194 305 1.2E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 PRINTS PR00605 Class IC cytochrome C signature 393 415 4.6E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 PRINTS PR00605 Class IC cytochrome C signature 340 351 4.6E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RMET_RS12545 339b6ffaef5995e8ae20f313e0440e91 450 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 332 415 6.1E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS06795 2aca0309e4f2a8d86ebd4a5dc2a016dc 234 Pfam PF04335 VirB8 protein 23 225 8.3E-70 T 22-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 RMET_RS06795 2aca0309e4f2a8d86ebd4a5dc2a016dc 234 SUPERFAMILY SSF54427 93 226 2.54E-29 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 Gene3D G3DSA:3.20.20.120 125 403 7.6E-100 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 SUPERFAMILY SSF54826 14 143 4.55E-33 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 Pfam PF13378 Enolase C-terminal domain-like 195 410 5.2E-35 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 47 143 1.3E-5 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 12 451 5.0E-260 T 22-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 Gene3D G3DSA:3.30.390.10 18 124 5.9E-10 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 PANTHER PTHR13794:SF47 179 436 3.5E-278 T 22-04-2016 RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 PANTHER PTHR13794:SF47 13 158 3.5E-278 T 22-04-2016 RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 PANTHER PTHR13794 179 436 3.5E-278 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 PANTHER PTHR13794 13 158 3.5E-278 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 SUPERFAMILY SSF51604 145 420 1.04E-81 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RMET_RS04180 0f1a10d22d0969d6e5745719028e8e8b 451 SMART SM00922 191 291 2.8E-12 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RMET_RS12575 591c56ee675b83ba3ac122acecb32d5c 225 SUPERFAMILY SSF54593 1 120 4.98E-5 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS12575 591c56ee675b83ba3ac122acecb32d5c 225 Pfam PF13468 Glyoxalase-like domain 5 192 3.3E-40 T 22-04-2016 IPR025870 Glyoxalase-like domain RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 Pfam PF02562 PhoH-like protein 351 558 1.4E-54 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 SUPERFAMILY SSF52540 469 544 1.11E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 SUPERFAMILY SSF52540 350 436 1.11E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 SUPERFAMILY SSF88723 201 253 1.82E-11 T 22-04-2016 IPR029060 PIN domain-like RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 SUPERFAMILY SSF88723 103 164 1.82E-11 T 22-04-2016 IPR029060 PIN domain-like RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 SMART SM00670 103 238 1.7E-11 T 22-04-2016 IPR002716 PIN domain RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 PANTHER PTHR30473:SF2 102 278 2.3E-179 T 22-04-2016 RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 PANTHER PTHR30473:SF2 299 564 2.3E-179 T 22-04-2016 RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 Pfam PF13638 PIN domain 105 250 4.6E-40 T 22-04-2016 IPR002716 PIN domain RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 PANTHER PTHR30473 102 278 2.3E-179 T 22-04-2016 RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 PANTHER PTHR30473 299 564 2.3E-179 T 22-04-2016 RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 Gene3D G3DSA:3.40.50.300 348 563 1.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 Gene3D G3DSA:3.40.50.1010 104 163 2.1E-9 T 22-04-2016 IPR029060 PIN domain-like RMET_RS09875 64398b508888d12b16d8fec4cf29e462 564 Gene3D G3DSA:3.40.50.1010 201 257 2.1E-9 T 22-04-2016 IPR029060 PIN domain-like RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 Gene3D G3DSA:3.40.190.10 95 175 7.2E-14 T 22-04-2016 RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 Gene3D G3DSA:3.40.190.10 176 265 5.0E-17 T 22-04-2016 RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 PANTHER PTHR30126 8 297 4.5E-109 T 22-04-2016 RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 PANTHER PTHR30126:SF36 8 297 4.5E-109 T 22-04-2016 RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 8.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 SUPERFAMILY SSF53850 95 303 5.27E-38 T 22-04-2016 RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 Gene3D G3DSA:1.10.10.10 8 90 2.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 SUPERFAMILY SSF46785 4 114 2.07E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11470 05a366265f18a295cb6363eee14ec1ed 305 Pfam PF03466 LysR substrate binding domain 95 298 1.0E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 597 37.107 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 Pfam PF01434 Peptidase family M41 384 590 4.2E-78 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 591 2.7E-234 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 Gene3D G3DSA:1.10.8.60 334 407 1.3E-29 T 22-04-2016 RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 PANTHER PTHR23076 5 631 0.0 T 22-04-2016 RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 Pfam PF06480 FtsH Extracellular 11 78 1.1E-8 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 SUPERFAMILY SSF52540 150 393 5.03E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 SMART SM00382 186 325 2.5E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 SUPERFAMILY SSF140990 404 600 3.01E-72 T 22-04-2016 RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 Gene3D G3DSA:3.40.50.300 149 333 9.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 2.8E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS10985 2c29e693d4f512d8261d04031e161b43 633 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 SUPERFAMILY SSF82679 18 129 2.22E-38 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 SMART SM00739 139 166 1.4E-5 T 22-04-2016 IPR005824 KOW RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 Pfam PF00467 KOW motif 142 176 5.1E-7 T 22-04-2016 IPR005824 KOW RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 18 193 25.372 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 Gene3D G3DSA:3.30.70.940 18 130 1.2E-45 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 ProSitePatterns PS01014 Transcription termination factor nusG signature. 176 185 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 Gene3D G3DSA:2.30.30.30 132 193 5.9E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 SMART SM00738 18 127 9.8E-47 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 Pfam PF02357 Transcription termination factor nusG 19 124 1.2E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 PANTHER PTHR30265 16 193 1.0E-79 T 22-04-2016 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 21 193 3.2E-69 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 SUPERFAMILY SSF50104 137 193 1.05E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 PRINTS PR00338 Transcription termination factor NUSG signature 169 185 1.5E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 PRINTS PR00338 Transcription termination factor NUSG signature 73 85 1.5E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RMET_RS16745 aafd33f31ee8464e0e3c80531cc7baf7 193 PRINTS PR00338 Transcription termination factor NUSG signature 151 166 1.5E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RMET_RS05330 5708188a52d4c740ce5798d2f79b1452 283 PANTHER PTHR21496 65 283 1.9E-84 T 22-04-2016 RMET_RS05330 5708188a52d4c740ce5798d2f79b1452 283 PANTHER PTHR21496:SF10 65 283 1.9E-84 T 22-04-2016 RMET_RS05330 5708188a52d4c740ce5798d2f79b1452 283 SUPERFAMILY SSF47240 92 260 1.13E-17 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS05330 5708188a52d4c740ce5798d2f79b1452 283 Pfam PF04305 Protein of unknown function (DUF455) 27 275 7.4E-97 T 22-04-2016 IPR007402 Protein of unknown function DUF455 RMET_RS05330 5708188a52d4c740ce5798d2f79b1452 283 PIRSF PIRSF012318 14 282 3.9E-98 T 22-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 PANTHER PTHR11552:SF51 2 554 2.6E-220 T 22-04-2016 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 Gene3D G3DSA:3.50.50.60 469 537 1.6E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 Gene3D G3DSA:3.50.50.60 2 126 1.6E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 Gene3D G3DSA:3.50.50.60 187 316 1.6E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 PIRSF PIRSF000137 1 544 5.4E-150 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 Pfam PF00732 GMC oxidoreductase 4 298 1.9E-79 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 SUPERFAMILY SSF54373 293 476 1.08E-58 T 22-04-2016 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 SUPERFAMILY SSF51905 475 537 1.0E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 SUPERFAMILY SSF51905 3 291 1.0E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 Pfam PF05199 GMC oxidoreductase 390 528 1.6E-38 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RMET_RS17690 34a809cb92f7aae16e961590381d533e 555 PANTHER PTHR11552 2 554 2.6E-220 T 22-04-2016 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 PIRSF PIRSF000190 1 212 2.5E-81 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 1.3E-27 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 Gene3D G3DSA:2.30.110.10 10 212 2.8E-85 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 1.4E-20 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 PANTHER PTHR10851:SF0 1 212 2.8E-106 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 212 2.6E-86 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 SUPERFAMILY SSF50475 7 212 1.37E-71 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 40.621 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RMET_RS13280 d09fff2ae0a0e426fb3ec4de0e9240ab 212 PANTHER PTHR10851 1 212 2.8E-106 T 22-04-2016 RMET_RS00670 cbabe1041899f37d2a9122116f458c3e 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 1.8E-83 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RMET_RS00670 cbabe1041899f37d2a9122116f458c3e 178 Gene3D G3DSA:3.60.20.10 7 178 4.5E-82 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS00670 cbabe1041899f37d2a9122116f458c3e 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.922 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RMET_RS00670 cbabe1041899f37d2a9122116f458c3e 178 Pfam PF00227 Proteasome subunit 5 176 7.5E-24 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RMET_RS00670 cbabe1041899f37d2a9122116f458c3e 178 PIRSF PIRSF039093 1 178 8.0E-85 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RMET_RS00670 cbabe1041899f37d2a9122116f458c3e 178 SUPERFAMILY SSF56235 3 177 3.26E-59 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS00670 cbabe1041899f37d2a9122116f458c3e 178 PANTHER PTHR32194 1 178 8.8E-118 T 22-04-2016 RMET_RS04305 b24bd808ad0642523473f97eead18aab 67 Pfam PF01192 RNA polymerase Rpb6 8 58 3.7E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS04305 b24bd808ad0642523473f97eead18aab 67 SMART SM01409 8 59 8.7E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS04305 b24bd808ad0642523473f97eead18aab 67 SUPERFAMILY SSF63562 1 63 7.98E-21 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS04305 b24bd808ad0642523473f97eead18aab 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 16.525 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS04305 b24bd808ad0642523473f97eead18aab 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 5.2E-18 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS04305 b24bd808ad0642523473f97eead18aab 67 Gene3D G3DSA:3.90.940.10 1 64 2.9E-12 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RMET_RS04305 b24bd808ad0642523473f97eead18aab 67 PANTHER PTHR34476 2 62 7.4E-16 T 22-04-2016 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 Pfam PF01565 FAD binding domain 23 153 5.5E-20 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 SUPERFAMILY SSF56194 209 336 1.57E-43 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 SUPERFAMILY SSF56176 8 196 7.94E-44 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 PANTHER PTHR21071 3 335 3.5E-143 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 Gene3D G3DSA:3.30.43.10 8 72 5.8E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 Gene3D G3DSA:3.30.465.10 79 235 4.4E-52 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 336 79.004 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 Gene3D G3DSA:3.90.78.10 236 336 9.6E-38 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 212 336 3.1E-31 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 PANTHER PTHR21071:SF6 3 335 3.5E-143 T 22-04-2016 RMET_RS14535 e168e4acd81cb4a674c1f2c9cb9883a8 336 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 10 332 1.1E-67 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS05350 0ff16d34de1e6456ad2256ad73e66c64 284 Gene3D G3DSA:3.20.20.140 10 95 1.1E-38 T 22-04-2016 RMET_RS05350 0ff16d34de1e6456ad2256ad73e66c64 284 Gene3D G3DSA:3.20.20.140 165 262 1.1E-38 T 22-04-2016 RMET_RS05350 0ff16d34de1e6456ad2256ad73e66c64 284 PANTHER PTHR30007:SF4 4 284 7.6E-66 T 22-04-2016 RMET_RS05350 0ff16d34de1e6456ad2256ad73e66c64 284 Pfam PF02811 PHP domain 13 91 5.4E-6 T 22-04-2016 IPR004013 PHP domain GO:0003824 RMET_RS05350 0ff16d34de1e6456ad2256ad73e66c64 284 SMART SM00481 12 77 5.8E-13 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RMET_RS05350 0ff16d34de1e6456ad2256ad73e66c64 284 SUPERFAMILY SSF89550 10 90 3.53E-48 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RMET_RS05350 0ff16d34de1e6456ad2256ad73e66c64 284 SUPERFAMILY SSF89550 173 282 3.53E-48 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RMET_RS05350 0ff16d34de1e6456ad2256ad73e66c64 284 PANTHER PTHR30007 4 284 7.6E-66 T 22-04-2016 RMET_RS11280 2618aabeed15920b70352541af361532 850 SMART SM00091 122 190 1.0E-5 T 22-04-2016 IPR000014 PAS domain RMET_RS11280 2618aabeed15920b70352541af361532 850 SMART SM00091 1 67 0.93 T 22-04-2016 IPR000014 PAS domain RMET_RS11280 2618aabeed15920b70352541af361532 850 SMART SM00065 241 408 0.0091 T 22-04-2016 IPR003018 GAF domain GO:0005515 RMET_RS11280 2618aabeed15920b70352541af361532 850 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 567 2.1E-31 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11280 2618aabeed15920b70352541af361532 850 Pfam PF00563 EAL domain 595 830 4.4E-69 T 22-04-2016 IPR001633 EAL domain RMET_RS11280 2618aabeed15920b70352541af361532 850 Gene3D G3DSA:3.30.450.20 4 84 1.1E-9 T 22-04-2016 RMET_RS11280 2618aabeed15920b70352541af361532 850 Gene3D G3DSA:3.30.450.20 123 237 3.7E-18 T 22-04-2016 RMET_RS11280 2618aabeed15920b70352541af361532 850 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 567 8.0E-36 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11280 2618aabeed15920b70352541af361532 850 Pfam PF13426 PAS domain 133 238 2.4E-10 T 22-04-2016 IPR000014 PAS domain RMET_RS11280 2618aabeed15920b70352541af361532 850 SUPERFAMILY SSF55781 261 411 5.23E-19 T 22-04-2016 IPR029016 GAF domain-like RMET_RS11280 2618aabeed15920b70352541af361532 850 SUPERFAMILY SSF141868 596 842 4.05E-81 T 22-04-2016 IPR001633 EAL domain RMET_RS11280 2618aabeed15920b70352541af361532 850 Gene3D G3DSA:3.30.70.270 412 582 2.5E-42 T 22-04-2016 RMET_RS11280 2618aabeed15920b70352541af361532 850 SUPERFAMILY SSF55073 416 569 1.88E-37 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS11280 2618aabeed15920b70352541af361532 850 PIRSF PIRSF005925 117 846 2.5E-209 T 22-04-2016 RMET_RS11280 2618aabeed15920b70352541af361532 850 SUPERFAMILY SSF55785 122 237 2.97E-16 T 22-04-2016 IPR000014 PAS domain RMET_RS11280 2618aabeed15920b70352541af361532 850 SMART SM00052 589 835 1.5E-95 T 22-04-2016 IPR001633 EAL domain RMET_RS11280 2618aabeed15920b70352541af361532 850 Pfam PF13185 GAF domain 260 398 1.2E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 RMET_RS11280 2618aabeed15920b70352541af361532 850 Gene3D G3DSA:3.20.20.450 593 840 1.9E-88 T 22-04-2016 IPR001633 EAL domain RMET_RS11280 2618aabeed15920b70352541af361532 850 SMART SM00267 400 579 2.8E-50 T 22-04-2016 IPR000160 GGDEF domain RMET_RS11280 2618aabeed15920b70352541af361532 850 Gene3D G3DSA:3.30.450.40 243 411 2.7E-15 T 22-04-2016 IPR029016 GAF domain-like RMET_RS11280 2618aabeed15920b70352541af361532 850 SUPERFAMILY SSF55785 4 87 1.92E-7 T 22-04-2016 IPR000014 PAS domain RMET_RS11280 2618aabeed15920b70352541af361532 850 PANTHER PTHR33121 575 844 2.0E-76 T 22-04-2016 RMET_RS11280 2618aabeed15920b70352541af361532 850 Pfam PF00989 PAS fold 4 43 3.0E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 RMET_RS11280 2618aabeed15920b70352541af361532 850 PANTHER PTHR33121:SF13 575 844 2.0E-76 T 22-04-2016 RMET_RS11280 2618aabeed15920b70352541af361532 850 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 241 1.3E-10 T 22-04-2016 IPR000014 PAS domain RMET_RS09155 652755427b28abd4797a85d120cad3dc 332 PANTHER PTHR30518:SF2 1 329 2.8E-86 T 22-04-2016 RMET_RS09155 652755427b28abd4797a85d120cad3dc 332 Gene3D G3DSA:3.30.160.60 299 329 8.1E-16 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RMET_RS09155 652755427b28abd4797a85d120cad3dc 332 PANTHER PTHR30518 1 329 2.8E-86 T 22-04-2016 RMET_RS09155 652755427b28abd4797a85d120cad3dc 332 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 329 4.3E-84 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RMET_RS09155 652755427b28abd4797a85d120cad3dc 332 Pfam PF02618 YceG-like family 40 326 1.2E-78 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RMET_RS09415 91e3820383d6cb689d34c01cf459607f 232 PANTHER PTHR24220:SF509 7 226 1.1E-97 T 22-04-2016 RMET_RS09415 91e3820383d6cb689d34c01cf459607f 232 SUPERFAMILY SSF52540 5 225 5.71E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09415 91e3820383d6cb689d34c01cf459607f 232 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS09415 91e3820383d6cb689d34c01cf459607f 232 Pfam PF00005 ABC transporter 25 172 8.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS09415 91e3820383d6cb689d34c01cf459607f 232 SMART SM00382 34 221 2.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09415 91e3820383d6cb689d34c01cf459607f 232 PANTHER PTHR24220 7 226 1.1E-97 T 22-04-2016 RMET_RS09415 91e3820383d6cb689d34c01cf459607f 232 Gene3D G3DSA:3.40.50.300 5 224 1.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 5.9E-5 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 SMART SM01086 335 434 5.2E-19 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Gene3D G3DSA:3.40.50.300 5 111 1.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Gene3D G3DSA:3.40.50.300 245 331 1.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 SMART SM00382 50 332 1.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 186 329 2.5E-41 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 443 2.9E-205 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 PANTHER PTHR11262 5 106 3.1E-198 T 22-04-2016 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 PANTHER PTHR11262 218 443 3.1E-198 T 22-04-2016 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 2 443 43.761 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 SUPERFAMILY SSF52540 4 439 4.87E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Gene3D G3DSA:1.10.8.60 334 443 1.9E-32 T 22-04-2016 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 103 2.2E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 PANTHER PTHR11262:SF3 5 106 3.1E-198 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 PANTHER PTHR11262:SF3 218 443 3.1E-198 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Gene3D G3DSA:1.10.8.10 213 243 1.1E-32 T 22-04-2016 RMET_RS00675 43917175d6ddabcd35589ae8aa5dcef7 443 Gene3D G3DSA:1.10.8.10 112 177 1.1E-32 T 22-04-2016 RMET_RS15355 e38e3e245a49dab9264e7b38c0417799 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 4.96E-20 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RMET_RS15355 e38e3e245a49dab9264e7b38c0417799 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 4.96E-20 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RMET_RS15355 e38e3e245a49dab9264e7b38c0417799 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 4.96E-20 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RMET_RS15355 e38e3e245a49dab9264e7b38c0417799 153 Gene3D G3DSA:2.40.50.100 77 152 2.5E-33 T 22-04-2016 RMET_RS15355 e38e3e245a49dab9264e7b38c0417799 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 1.5E-55 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RMET_RS15355 e38e3e245a49dab9264e7b38c0417799 153 SUPERFAMILY SSF51230 78 152 1.03E-25 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS15355 e38e3e245a49dab9264e7b38c0417799 153 Pfam PF00364 Biotin-requiring enzyme 79 152 8.5E-26 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RMET_RS15355 e38e3e245a49dab9264e7b38c0417799 153 PANTHER PTHR23151 1 152 4.5E-45 T 22-04-2016 RMET_RS10630 c575cf1027e9b145c81c471d57858f2d 326 PANTHER PTHR30349:SF16 12 323 8.5E-90 T 22-04-2016 RMET_RS10630 c575cf1027e9b145c81c471d57858f2d 326 SUPERFAMILY SSF53850 111 288 3.96E-16 T 22-04-2016 RMET_RS10630 c575cf1027e9b145c81c471d57858f2d 326 PANTHER PTHR30349 12 323 8.5E-90 T 22-04-2016 RMET_RS10630 c575cf1027e9b145c81c471d57858f2d 326 PIRSF PIRSF017082 1 326 7.9E-94 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS10630 c575cf1027e9b145c81c471d57858f2d 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 321 1.0E-87 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS07485 6660b94b9dbfa2f2ddd4a56f6087a03b 212 SUPERFAMILY SSF52540 1 210 1.34E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07485 6660b94b9dbfa2f2ddd4a56f6087a03b 212 PIRSF PIRSF009320 1 210 2.1E-51 T 22-04-2016 RMET_RS07485 6660b94b9dbfa2f2ddd4a56f6087a03b 212 Gene3D G3DSA:3.40.50.300 1 210 1.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07485 6660b94b9dbfa2f2ddd4a56f6087a03b 212 PANTHER PTHR13696 1 209 7.3E-65 T 22-04-2016 RMET_RS07485 6660b94b9dbfa2f2ddd4a56f6087a03b 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 159 2.6E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RMET_RS07485 6660b94b9dbfa2f2ddd4a56f6087a03b 212 PANTHER PTHR13696:SF54 1 209 7.3E-65 T 22-04-2016 RMET_RS02030 aee91b09cf24fd205298a35b0fe5d7ad 227 Gene3D G3DSA:1.10.3720.10 18 225 3.3E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02030 aee91b09cf24fd205298a35b0fe5d7ad 227 PANTHER PTHR30614:SF1 1 227 7.5E-116 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 RMET_RS02030 aee91b09cf24fd205298a35b0fe5d7ad 227 SUPERFAMILY SSF161098 18 217 5.1E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02030 aee91b09cf24fd205298a35b0fe5d7ad 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 225 6.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02030 aee91b09cf24fd205298a35b0fe5d7ad 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 120 3.9E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RMET_RS02030 aee91b09cf24fd205298a35b0fe5d7ad 227 PANTHER PTHR30614 1 227 7.5E-116 T 22-04-2016 RMET_RS04965 fceb413349947da39fa93051486a4d54 114 SUPERFAMILY SSF46626 4 108 2.26E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS04965 fceb413349947da39fa93051486a4d54 114 PANTHER PTHR33751 4 113 3.2E-15 T 22-04-2016 RMET_RS04965 fceb413349947da39fa93051486a4d54 114 Gene3D G3DSA:1.10.760.10 12 104 7.5E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 2.4E-186 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 SUPERFAMILY SSF51569 3 329 2.05E-107 T 22-04-2016 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 PANTHER PTHR30304 1 349 1.1E-122 T 22-04-2016 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 Gene3D G3DSA:3.20.20.70 1 335 8.5E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 6.5E-96 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 2.5E-99 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS02545 ba9f4400cf2d2d662db643ef0fc631f4 354 PIRSF PIRSF001359 1 329 5.6E-85 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RMET_RS12440 1e477582bb86dc351596ef5e8a2b1a63 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 7.6E-53 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS12440 1e477582bb86dc351596ef5e8a2b1a63 308 PANTHER PTHR11795:SF371 7 308 4.6E-131 T 22-04-2016 RMET_RS12440 1e477582bb86dc351596ef5e8a2b1a63 308 PANTHER PTHR11795 7 308 4.6E-131 T 22-04-2016 RMET_RS16960 87460dbd8bf6489174eeaf18268fb1ae 604 PANTHER PTHR16254:SF6 1 561 1.1E-226 T 22-04-2016 RMET_RS16960 87460dbd8bf6489174eeaf18268fb1ae 604 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 288 8.8E-83 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RMET_RS16960 87460dbd8bf6489174eeaf18268fb1ae 604 PANTHER PTHR16254 1 561 1.1E-226 T 22-04-2016 RMET_RS16960 87460dbd8bf6489174eeaf18268fb1ae 604 SUPERFAMILY SSF51735 406 536 7.21E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16960 87460dbd8bf6489174eeaf18268fb1ae 604 Pfam PF02254 TrkA-N domain 407 516 2.3E-21 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RMET_RS16960 87460dbd8bf6489174eeaf18268fb1ae 604 Gene3D G3DSA:3.40.50.720 401 536 1.3E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16960 87460dbd8bf6489174eeaf18268fb1ae 604 Pfam PF00999 Sodium/hydrogen exchanger family 10 377 7.2E-64 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RMET_RS18000 c8f791d6d0572c514ad59f84269ae948 278 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 29 231 1.1E-40 T 22-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN RMET_RS18000 c8f791d6d0572c514ad59f84269ae948 278 SUPERFAMILY SSF159501 22 263 1.74E-58 T 22-04-2016 RMET_RS18000 c8f791d6d0572c514ad59f84269ae948 278 PIRSF PIRSF020419 19 274 1.5E-34 T 22-04-2016 IPR016773 Ferric uptake regulator, CjrA, predicted RMET_RS11045 692cafa61c829ed726d8d11a62f44bc5 283 PANTHER PTHR11941:SF90 8 280 5.3E-132 T 22-04-2016 RMET_RS11045 692cafa61c829ed726d8d11a62f44bc5 283 Gene3D G3DSA:1.10.12.10 225 283 3.1E-18 T 22-04-2016 IPR014748 Crontonase, C-terminal RMET_RS11045 692cafa61c829ed726d8d11a62f44bc5 283 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RMET_RS11045 692cafa61c829ed726d8d11a62f44bc5 283 SUPERFAMILY SSF52096 18 282 2.4E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS11045 692cafa61c829ed726d8d11a62f44bc5 283 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 282 9.2E-42 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS11045 692cafa61c829ed726d8d11a62f44bc5 283 Gene3D G3DSA:3.90.226.10 26 224 4.5E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS11045 692cafa61c829ed726d8d11a62f44bc5 283 PANTHER PTHR11941 8 280 5.3E-132 T 22-04-2016 RMET_RS00240 eb3ec02f2ff9182d31d5ef1d58b352e2 300 PANTHER PTHR33490 4 297 3.4E-65 T 22-04-2016 RMET_RS00240 eb3ec02f2ff9182d31d5ef1d58b352e2 300 Pfam PF01841 Transglutaminase-like superfamily 156 251 9.6E-21 T 22-04-2016 IPR002931 Transglutaminase-like RMET_RS00240 eb3ec02f2ff9182d31d5ef1d58b352e2 300 PANTHER PTHR33490:SF6 4 297 3.4E-65 T 22-04-2016 RMET_RS00240 eb3ec02f2ff9182d31d5ef1d58b352e2 300 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 9 87 2.3E-21 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RMET_RS00240 eb3ec02f2ff9182d31d5ef1d58b352e2 300 SMART SM00460 183 253 2.3E-20 T 22-04-2016 IPR002931 Transglutaminase-like RMET_RS00240 eb3ec02f2ff9182d31d5ef1d58b352e2 300 Gene3D G3DSA:3.90.260.10 162 258 1.3E-16 T 22-04-2016 IPR002931 Transglutaminase-like RMET_RS00240 eb3ec02f2ff9182d31d5ef1d58b352e2 300 SUPERFAMILY SSF54001 103 298 1.96E-41 T 22-04-2016 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 Gene3D G3DSA:1.20.950.20 26 238 9.1E-26 T 22-04-2016 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 37 54 - T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 PANTHER PTHR30485 12 243 6.8E-100 T 22-04-2016 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 Pfam PF01292 Prokaryotic cytochrome b561 31 237 1.7E-29 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 SUPERFAMILY SSF81342 25 242 2.98E-41 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 151 170 2.3E-55 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 34 57 2.3E-55 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 72 96 2.3E-55 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 229 242 2.3E-55 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 198 220 2.3E-55 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 PANTHER PTHR30485:SF0 12 243 6.8E-100 T 22-04-2016 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 198 215 - T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RMET_RS06525 916598fd74160eb9d4ff7716bf1ec0a3 243 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 30 243 2.1E-74 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 298 7.2E-127 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 PANTHER PTHR11082:SF29 1 310 8.7E-137 T 22-04-2016 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 Gene3D G3DSA:3.20.20.70 1 237 3.8E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 316 45.866 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 PIRSF PIRSF006621 1 313 3.6E-69 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 SUPERFAMILY SSF51395 1 298 8.55E-68 T 22-04-2016 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 PANTHER PTHR11082 1 310 8.7E-137 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RMET_RS09960 2a577a145ed2aa4c6706ea344bd86212 322 Pfam PF01207 Dihydrouridine synthase (Dus) 1 304 2.4E-75 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RMET_RS04055 3f115c10f878be9c5d5031f72d3e6a91 343 Pfam PF01212 Beta-eliminating lyase 3 292 1.1E-78 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 RMET_RS04055 3f115c10f878be9c5d5031f72d3e6a91 343 Gene3D G3DSA:3.90.1150.10 254 339 1.6E-15 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS04055 3f115c10f878be9c5d5031f72d3e6a91 343 Gene3D G3DSA:3.40.640.10 3 251 3.7E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS04055 3f115c10f878be9c5d5031f72d3e6a91 343 PIRSF PIRSF038940 1 343 1.4E-160 T 22-04-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 RMET_RS04055 3f115c10f878be9c5d5031f72d3e6a91 343 PANTHER PTHR10289:SF8 1 341 3.4E-151 T 22-04-2016 RMET_RS04055 3f115c10f878be9c5d5031f72d3e6a91 343 SUPERFAMILY SSF53383 1 338 3.75E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS04055 3f115c10f878be9c5d5031f72d3e6a91 343 PANTHER PTHR10289 1 341 3.4E-151 T 22-04-2016 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 Gene3D G3DSA:3.10.20.10 23 109 3.7E-31 T 22-04-2016 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 Hamap MF_00187 Protein FdhD [fdhD]. 1 262 32.191 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 Pfam PF02634 FdhD/NarQ family 21 258 3.9E-72 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 SUPERFAMILY SSF53927 5 258 7.22E-77 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 Gene3D G3DSA:3.40.140.10 128 258 9.0E-47 T 22-04-2016 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 PANTHER PTHR30592:SF1 2 273 1.8E-98 T 22-04-2016 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 PIRSF PIRSF015626 2 262 6.3E-80 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 18 258 5.0E-67 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS05660 a1ef8cbd99b496f6ca039e2ed9e2647d 275 PANTHER PTHR30592 2 273 1.8E-98 T 22-04-2016 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 Gene3D G3DSA:3.30.413.10 120 278 1.6E-39 T 22-04-2016 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 SUPERFAMILY SSF56014 410 551 8.77E-40 T 22-04-2016 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 Gene3D G3DSA:3.30.413.10 409 549 2.0E-36 T 22-04-2016 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 SUPERFAMILY SSF55124 1 126 6.54E-31 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 SUPERFAMILY SSF55124 315 422 1.06E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 SUPERFAMILY SSF55124 252 276 1.06E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 PRINTS PR00397 Sirohaem Fe-binding site signature 457 475 9.1E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 PRINTS PR00397 Sirohaem Fe-binding site signature 411 429 9.1E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 Gene3D G3DSA:3.90.480.10 48 117 5.4E-37 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 Gene3D G3DSA:3.90.480.10 321 404 5.4E-37 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 452 549 8.7E-12 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 9.5E-39 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 PANTHER PTHR11493:SF47 327 552 4.1E-153 T 22-04-2016 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 PANTHER PTHR11493:SF47 1 294 4.1E-153 T 22-04-2016 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 50 110 4.3E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 328 399 5.1E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 SUPERFAMILY SSF56014 120 287 7.98E-45 T 22-04-2016 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 PANTHER PTHR11493 327 552 4.1E-153 T 22-04-2016 RMET_RS14130 be042fc08e69b9da9643339d518b06cc 560 PANTHER PTHR11493 1 294 4.1E-153 T 22-04-2016 RMET_RS14275 1b6f84335e0e35e2ddb593b3246e20a3 366 Gene3D G3DSA:1.10.150.130 74 179 3.2E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS14275 1b6f84335e0e35e2ddb593b3246e20a3 366 PANTHER PTHR30349 74 353 3.4E-35 T 22-04-2016 RMET_RS14275 1b6f84335e0e35e2ddb593b3246e20a3 366 PANTHER PTHR30349:SF20 74 353 3.4E-35 T 22-04-2016 RMET_RS14275 1b6f84335e0e35e2ddb593b3246e20a3 366 SUPERFAMILY SSF56349 74 354 1.3E-50 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS14275 1b6f84335e0e35e2ddb593b3246e20a3 366 Gene3D G3DSA:1.10.443.10 186 352 9.8E-34 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS14275 1b6f84335e0e35e2ddb593b3246e20a3 366 Pfam PF00589 Phage integrase family 187 344 8.5E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS14625 593ac5bcb5fa93719fc079230d6c4bcd 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 225 4.6E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS14625 593ac5bcb5fa93719fc079230d6c4bcd 232 PANTHER PTHR30183:SF4 1 226 5.9E-80 T 22-04-2016 RMET_RS14625 593ac5bcb5fa93719fc079230d6c4bcd 232 Gene3D G3DSA:1.10.3720.10 11 227 8.7E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS14625 593ac5bcb5fa93719fc079230d6c4bcd 232 SUPERFAMILY SSF161098 6 225 4.45E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS14625 593ac5bcb5fa93719fc079230d6c4bcd 232 PANTHER PTHR30183 1 226 5.9E-80 T 22-04-2016 RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 SMART SM00487 68 287 1.2E-57 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 Gene3D G3DSA:3.40.50.300 43 276 9.7E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 SUPERFAMILY SSF52540 140 426 1.02E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 PANTHER PTHR24031 50 531 5.8E-185 T 22-04-2016 RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 PANTHER PTHR24031 7 16 5.8E-185 T 22-04-2016 RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 Pfam PF00271 Helicase conserved C-terminal domain 301 405 2.5E-28 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 PANTHER PTHR24031:SF261 50 531 5.8E-185 T 22-04-2016 RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 PANTHER PTHR24031:SF261 7 16 5.8E-185 T 22-04-2016 RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 Gene3D G3DSA:3.40.50.300 277 434 9.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 Pfam PF00270 DEAD/DEAH box helicase 73 258 8.6E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS12885 6db01ccf7b16ba92f07d7ac80b2055d1 634 SMART SM00490 324 405 6.8E-34 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS06065 8e487071239d2a1d28260cd35e3e37ff 148 PANTHER PTHR31793:SF7 8 148 6.9E-60 T 22-04-2016 RMET_RS06065 8e487071239d2a1d28260cd35e3e37ff 148 SUPERFAMILY SSF54637 8 142 2.62E-39 T 22-04-2016 IPR029069 HotDog domain RMET_RS06065 8e487071239d2a1d28260cd35e3e37ff 148 PANTHER PTHR31793 8 148 6.9E-60 T 22-04-2016 RMET_RS06065 8e487071239d2a1d28260cd35e3e37ff 148 Gene3D G3DSA:3.10.129.10 3 142 3.7E-52 T 22-04-2016 IPR029069 HotDog domain RMET_RS06065 8e487071239d2a1d28260cd35e3e37ff 148 Pfam PF03061 Thioesterase superfamily 27 109 4.8E-14 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS00930 41044211f1d66cd7a75d9358975eb2b7 132 TIGRFAM TIGR00526 folB_dom: FolB domain 18 126 1.0E-12 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RMET_RS00930 41044211f1d66cd7a75d9358975eb2b7 132 Pfam PF02152 Dihydroneopterin aldolase 18 126 3.2E-25 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RMET_RS00930 41044211f1d66cd7a75d9358975eb2b7 132 Gene3D G3DSA:3.30.1130.10 16 127 2.3E-31 T 22-04-2016 RMET_RS00930 41044211f1d66cd7a75d9358975eb2b7 132 SUPERFAMILY SSF55620 13 127 5.28E-27 T 22-04-2016 RMET_RS00930 41044211f1d66cd7a75d9358975eb2b7 132 SMART SM00905 17 128 2.8E-28 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RMET_RS13375 38bf1a35bb2fba5528759f82f320c956 632 SUPERFAMILY SSF52540 361 489 1.22E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13375 38bf1a35bb2fba5528759f82f320c956 632 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 286 586 1.4E-72 T 22-04-2016 IPR006500 DNA primase, phage/plasmid RMET_RS13375 38bf1a35bb2fba5528759f82f320c956 632 Pfam PF03288 Poxvirus D5 protein-like 540 593 3.7E-7 T 22-04-2016 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal RMET_RS13375 38bf1a35bb2fba5528759f82f320c956 632 PANTHER PTHR35372 280 577 8.9E-48 T 22-04-2016 RMET_RS13375 38bf1a35bb2fba5528759f82f320c956 632 PANTHER PTHR35372:SF2 280 577 8.9E-48 T 22-04-2016 RMET_RS13375 38bf1a35bb2fba5528759f82f320c956 632 Gene3D G3DSA:3.40.50.300 340 515 1.9E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13375 38bf1a35bb2fba5528759f82f320c956 632 SMART SM00885 207 335 8.7E-26 T 22-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal RMET_RS13375 38bf1a35bb2fba5528759f82f320c956 632 Pfam PF08706 D5 N terminal like 218 334 1.3E-9 T 22-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal RMET_RS13720 20e1d0685f21c99acf5891ab9290bcdd 306 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 10 303 5.2E-101 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RMET_RS13720 20e1d0685f21c99acf5891ab9290bcdd 306 Gene3D G3DSA:3.90.25.10 175 188 9.9E-29 T 22-04-2016 RMET_RS13720 20e1d0685f21c99acf5891ab9290bcdd 306 Gene3D G3DSA:3.90.25.10 230 293 9.9E-29 T 22-04-2016 RMET_RS13720 20e1d0685f21c99acf5891ab9290bcdd 306 Gene3D G3DSA:3.40.50.720 7 174 1.4E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13720 20e1d0685f21c99acf5891ab9290bcdd 306 Pfam PF04321 RmlD substrate binding domain 10 304 1.2E-103 T 22-04-2016 IPR029903 RmlD-like substrate binding domain RMET_RS13720 20e1d0685f21c99acf5891ab9290bcdd 306 SUPERFAMILY SSF51735 11 304 1.36E-95 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13720 20e1d0685f21c99acf5891ab9290bcdd 306 PANTHER PTHR10491:SF4 3 305 1.9E-89 T 22-04-2016 RMET_RS13720 20e1d0685f21c99acf5891ab9290bcdd 306 PANTHER PTHR10491 3 305 1.9E-89 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RMET_RS30800 7401d6bd6de7e4c6b9bd8b93f302b835 204 SUPERFAMILY SSF51735 95 204 1.75E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS30800 7401d6bd6de7e4c6b9bd8b93f302b835 204 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 99 203 3.3E-29 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS30800 7401d6bd6de7e4c6b9bd8b93f302b835 204 Gene3D G3DSA:3.40.50.720 93 203 3.9E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS30800 7401d6bd6de7e4c6b9bd8b93f302b835 204 PANTHER PTHR23309 95 204 7.6E-35 T 22-04-2016 RMET_RS25935 b01e35a6ab61bc4f05a131fa55ae7b84 335 PANTHER PTHR11699:SF210 1 335 5.5E-189 T 22-04-2016 RMET_RS25935 b01e35a6ab61bc4f05a131fa55ae7b84 335 Gene3D G3DSA:3.40.309.10 211 335 3.5E-41 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS25935 b01e35a6ab61bc4f05a131fa55ae7b84 335 PANTHER PTHR11699 1 335 5.5E-189 T 22-04-2016 RMET_RS25935 b01e35a6ab61bc4f05a131fa55ae7b84 335 SUPERFAMILY SSF53720 4 335 9.69E-119 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS25935 b01e35a6ab61bc4f05a131fa55ae7b84 335 Pfam PF00171 Aldehyde dehydrogenase family 5 335 1.1E-124 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS25935 b01e35a6ab61bc4f05a131fa55ae7b84 335 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 197 204 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RMET_RS25935 b01e35a6ab61bc4f05a131fa55ae7b84 335 Gene3D G3DSA:3.40.605.10 4 210 3.3E-82 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS25935 b01e35a6ab61bc4f05a131fa55ae7b84 335 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 226 237 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RMET_RS08980 0f7e4d45ef9726dfed72e852d47cfdec 384 PANTHER PTHR30489:SF11 1 383 1.3E-108 T 22-04-2016 RMET_RS08980 0f7e4d45ef9726dfed72e852d47cfdec 384 Pfam PF02687 FtsX-like permease family 260 374 4.8E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RMET_RS08980 0f7e4d45ef9726dfed72e852d47cfdec 384 Pfam PF12704 MacB-like periplasmic core domain 18 226 2.2E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RMET_RS08980 0f7e4d45ef9726dfed72e852d47cfdec 384 PANTHER PTHR30489 1 383 1.3E-108 T 22-04-2016 RMET_RS17415 94ad7ec3ce04069b0a1ab25c685a58bc 402 Pfam PF07690 Major Facilitator Superfamily 263 393 1.2E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS17415 94ad7ec3ce04069b0a1ab25c685a58bc 402 Pfam PF07690 Major Facilitator Superfamily 32 236 6.3E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS17415 94ad7ec3ce04069b0a1ab25c685a58bc 402 SUPERFAMILY SSF103473 6 393 1.11E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS17415 94ad7ec3ce04069b0a1ab25c685a58bc 402 Gene3D G3DSA:1.20.1250.20 213 392 4.2E-15 T 22-04-2016 RMET_RS17415 94ad7ec3ce04069b0a1ab25c685a58bc 402 PANTHER PTHR23534 6 396 1.6E-59 T 22-04-2016 RMET_RS17415 94ad7ec3ce04069b0a1ab25c685a58bc 402 Gene3D G3DSA:1.20.1250.20 12 197 9.3E-13 T 22-04-2016 RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 SMART SM00387 257 358 1.0E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 Pfam PF06580 Histidine kinase 163 242 5.8E-23 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 SUPERFAMILY SSF55874 219 356 1.7E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 357 3.5E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 Gene3D G3DSA:3.30.565.10 215 358 3.2E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 PANTHER PTHR34220 12 362 2.7E-59 T 22-04-2016 RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 309 2.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 2.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS06955 266454ad7bbc0e7476fcc3516f8bda25 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 355 2.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 SMART SM00116 319 369 12.0 T 22-04-2016 IPR000644 CBS domain RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 SMART SM00116 262 309 3.4E-7 T 22-04-2016 IPR000644 CBS domain RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 Pfam PF00571 CBS domain 266 309 6.8E-9 T 22-04-2016 IPR000644 CBS domain RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 Pfam PF00571 CBS domain 315 369 2.1E-6 T 22-04-2016 IPR000644 CBS domain RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 19 369 8.0E-104 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 Gene3D G3DSA:3.40.50.300 1 241 3.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 Pfam PF00005 ABC transporter 23 168 1.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 PANTHER PTHR24220:SF350 3 254 2.8E-152 T 22-04-2016 RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 SUPERFAMILY SSF54631 262 369 1.11E-22 T 22-04-2016 RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 SMART SM00382 31 226 4.9E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 SUPERFAMILY SSF52540 1 247 3.1E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 PANTHER PTHR24220 3 254 2.8E-152 T 22-04-2016 RMET_RS04020 92d70a4b771d946c05405615ed03ca3e 398 Gene3D G3DSA:3.10.580.10 262 369 1.6E-21 T 22-04-2016 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.9E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.9E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.9E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.9E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.688 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.3E-48 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 Gene3D G3DSA:3.90.1170.10 22 135 2.8E-52 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 PANTHER PTHR12220 1 136 1.6E-73 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 5.9E-60 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16600 70d55312c0d64364f6e7c582d3bcb193 138 SUPERFAMILY SSF54686 1 134 8.63E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RMET_RS04115 605430217df4510a0934165f728135a6 286 PIRSF PIRSF016184 1 286 8.0E-67 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RMET_RS04115 605430217df4510a0934165f728135a6 286 Gene3D G3DSA:3.10.310.10 124 275 5.4E-34 T 22-04-2016 RMET_RS04115 605430217df4510a0934165f728135a6 286 SUPERFAMILY SSF54506 5 286 4.71E-67 T 22-04-2016 RMET_RS04115 605430217df4510a0934165f728135a6 286 Pfam PF02567 Phenazine biosynthesis-like protein 9 274 5.3E-48 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RMET_RS04115 605430217df4510a0934165f728135a6 286 Gene3D G3DSA:3.10.310.10 4 123 8.8E-38 T 22-04-2016 RMET_RS04115 605430217df4510a0934165f728135a6 286 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 8 269 9.3E-51 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RMET_RS04115 605430217df4510a0934165f728135a6 286 PANTHER PTHR13774 1 286 6.6E-57 T 22-04-2016 RMET_RS04115 605430217df4510a0934165f728135a6 286 PANTHER PTHR13774:SF15 1 286 6.6E-57 T 22-04-2016 RMET_RS01855 7b44a8086a5b6ecfaf906a81d8c4f68f 192 Pfam PF09335 SNARE associated Golgi protein 52 169 2.6E-8 T 22-04-2016 IPR032816 SNARE associated Golgi protein RMET_RS01855 7b44a8086a5b6ecfaf906a81d8c4f68f 192 PANTHER PTHR30353:SF12 1 170 1.9E-29 T 22-04-2016 RMET_RS01855 7b44a8086a5b6ecfaf906a81d8c4f68f 192 PANTHER PTHR30353 1 170 1.9E-29 T 22-04-2016 IPR032818 DedA family RMET_RS12740 9fb4e1bf7bb54e47962bad290df6cc73 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 279 3.9E-49 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS12740 9fb4e1bf7bb54e47962bad290df6cc73 310 SMART SM00062 50 281 1.5E-53 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS12740 9fb4e1bf7bb54e47962bad290df6cc73 310 Gene3D G3DSA:3.40.190.10 134 241 1.7E-25 T 22-04-2016 RMET_RS12740 9fb4e1bf7bb54e47962bad290df6cc73 310 PANTHER PTHR30085 4 306 7.8E-104 T 22-04-2016 RMET_RS12740 9fb4e1bf7bb54e47962bad290df6cc73 310 PANTHER PTHR30085:SF2 4 306 7.8E-104 T 22-04-2016 RMET_RS12740 9fb4e1bf7bb54e47962bad290df6cc73 310 SUPERFAMILY SSF53850 22 282 1.26E-63 T 22-04-2016 RMET_RS12740 9fb4e1bf7bb54e47962bad290df6cc73 310 Gene3D G3DSA:3.40.190.10 242 283 1.1E-30 T 22-04-2016 RMET_RS12740 9fb4e1bf7bb54e47962bad290df6cc73 310 Gene3D G3DSA:3.40.190.10 47 133 1.1E-30 T 22-04-2016 RMET_RS01485 2ed739390777473a88249fde97f7bfb0 204 SUPERFAMILY SSF89392 20 199 2.24E-39 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RMET_RS01485 2ed739390777473a88249fde97f7bfb0 204 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 55 183 6.8E-18 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RMET_RS01485 2ed739390777473a88249fde97f7bfb0 204 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 203 21.209 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RMET_RS01485 2ed739390777473a88249fde97f7bfb0 204 Gene3D G3DSA:2.50.20.10 16 199 5.1E-43 T 22-04-2016 RMET_RS01485 2ed739390777473a88249fde97f7bfb0 204 Pfam PF03550 Outer membrane lipoprotein LolB 41 199 1.8E-41 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RMET_RS14780 56b4e60c51011e9e63d4e9031bcd4c95 416 Pfam PF02515 CoA-transferase family III 15 382 4.8E-122 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS14780 56b4e60c51011e9e63d4e9031bcd4c95 416 SUPERFAMILY SSF89796 13 406 4.97E-129 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS14780 56b4e60c51011e9e63d4e9031bcd4c95 416 Gene3D G3DSA:3.30.1540.10 232 315 2.1E-27 T 22-04-2016 RMET_RS14780 56b4e60c51011e9e63d4e9031bcd4c95 416 PANTHER PTHR24023 53 394 1.2E-26 T 22-04-2016 RMET_RS14780 56b4e60c51011e9e63d4e9031bcd4c95 416 PANTHER PTHR24023:SF593 53 394 1.2E-26 T 22-04-2016 RMET_RS14780 56b4e60c51011e9e63d4e9031bcd4c95 416 Gene3D G3DSA:3.40.50.10540 11 226 2.1E-107 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS14780 56b4e60c51011e9e63d4e9031bcd4c95 416 Gene3D G3DSA:3.40.50.10540 316 407 2.1E-107 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS01115 1afe61e13fe2acfaaeb3a573dad69fcd 271 PANTHER PTHR24220:SF458 5 270 7.0E-117 T 22-04-2016 RMET_RS01115 1afe61e13fe2acfaaeb3a573dad69fcd 271 Pfam PF00005 ABC transporter 20 171 8.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS01115 1afe61e13fe2acfaaeb3a573dad69fcd 271 Gene3D G3DSA:3.40.50.300 2 239 6.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01115 1afe61e13fe2acfaaeb3a573dad69fcd 271 SMART SM00382 29 221 3.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01115 1afe61e13fe2acfaaeb3a573dad69fcd 271 SUPERFAMILY SSF52540 3 243 3.59E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01115 1afe61e13fe2acfaaeb3a573dad69fcd 271 PANTHER PTHR24220 5 270 7.0E-117 T 22-04-2016 RMET_RS09500 6153fc0af3948d652c8c42be286ca20c 136 SUPERFAMILY SSF55331 2 121 8.02E-30 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RMET_RS09500 6153fc0af3948d652c8c42be286ca20c 136 Gene3D G3DSA:3.30.429.10 3 121 2.7E-35 T 22-04-2016 RMET_RS09500 6153fc0af3948d652c8c42be286ca20c 136 Pfam PF14552 Tautomerase enzyme 40 116 1.0E-21 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RMET_RS09500 6153fc0af3948d652c8c42be286ca20c 136 PANTHER PTHR38460 2 121 3.7E-28 T 22-04-2016 RMET_RS09500 6153fc0af3948d652c8c42be286ca20c 136 PANTHER PTHR38460:SF1 2 121 3.7E-28 T 22-04-2016 RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 PANTHER PTHR24220:SF574 82 486 4.2E-165 T 22-04-2016 RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 SUPERFAMILY SSF52540 371 530 1.32E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 PANTHER PTHR24220 82 486 4.2E-165 T 22-04-2016 RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 308 334 1.2E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 SMART SM00382 109 306 5.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 SMART SM00382 385 487 0.2 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 SUPERFAMILY SSF52540 81 328 3.94E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 Pfam PF00005 ABC transporter 101 256 4.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 Pfam PF00005 ABC transporter 377 529 3.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 Gene3D G3DSA:3.40.50.300 348 530 1.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 Gene3D G3DSA:3.40.50.300 82 331 1.1E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS28515 2720c41ec12d666111af6f44caadceb8 530 ProSitePatterns PS00211 ABC transporters family signature. 229 243 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS15105 e47a3a296bae16968b042725c878c9ba 235 PANTHER PTHR31851 3 231 2.9E-65 T 22-04-2016 RMET_RS15105 e47a3a296bae16968b042725c878c9ba 235 Pfam PF01988 VIT family 21 228 2.2E-55 T 22-04-2016 IPR008217 Ccc1 family RMET_RS00440 8f462356019e92de30d52479ecefeaf5 85 Pfam PF12091 Protein of unknown function (DUF3567) 1 85 1.2E-34 T 22-04-2016 IPR021951 Protein of unknown function DUF3567 RMET_RS03730 75b22bb424c6b1759da47fae6747f35e 361 Gene3D G3DSA:3.20.20.70 77 268 2.1E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS03730 75b22bb424c6b1759da47fae6747f35e 361 Pfam PF04055 Radical SAM superfamily 74 252 1.3E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS03730 75b22bb424c6b1759da47fae6747f35e 361 PANTHER PTHR11228 17 319 8.3E-87 T 22-04-2016 RMET_RS03730 75b22bb424c6b1759da47fae6747f35e 361 PANTHER PTHR11228:SF26 17 319 8.3E-87 T 22-04-2016 RMET_RS03730 75b22bb424c6b1759da47fae6747f35e 361 SUPERFAMILY SSF102114 58 270 1.1E-12 T 22-04-2016 RMET_RS03730 75b22bb424c6b1759da47fae6747f35e 361 SMART SM00729 70 297 2.0E-6 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS08000 bd3960d611d3880758976b89022edca6 207 SUPERFAMILY SSF52218 1 199 6.29E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS08000 bd3960d611d3880758976b89022edca6 207 Gene3D G3DSA:3.40.50.360 1 198 2.4E-56 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS08000 bd3960d611d3880758976b89022edca6 207 PANTHER PTHR10204:SF37 1 198 1.0E-61 T 22-04-2016 RMET_RS08000 bd3960d611d3880758976b89022edca6 207 Pfam PF02525 Flavodoxin-like fold 1 197 1.8E-42 T 22-04-2016 IPR003680 Flavodoxin-like fold RMET_RS08000 bd3960d611d3880758976b89022edca6 207 PANTHER PTHR10204 1 198 1.0E-61 T 22-04-2016 RMET_RS08000 bd3960d611d3880758976b89022edca6 207 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 199 29.107 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 RMET_RS13950 e6b7cb92b7c921ced4f69c12268a69e1 196 PANTHER PTHR34848 4 193 2.5E-67 T 22-04-2016 RMET_RS13950 e6b7cb92b7c921ced4f69c12268a69e1 196 SUPERFAMILY SSF52540 5 191 8.26E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13950 e6b7cb92b7c921ced4f69c12268a69e1 196 Gene3D G3DSA:3.40.50.300 5 191 2.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13950 e6b7cb92b7c921ced4f69c12268a69e1 196 PIRSF PIRSF006135 4 193 2.1E-52 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 RMET_RS13950 e6b7cb92b7c921ced4f69c12268a69e1 196 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 6 189 9.7E-58 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 RMET_RS02510 c6315f46c01692e0b4a3dd9c76db20b1 441 PANTHER PTHR23508:SF18 1 427 1.1E-131 T 22-04-2016 RMET_RS02510 c6315f46c01692e0b4a3dd9c76db20b1 441 SUPERFAMILY SSF103473 8 412 1.57E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS02510 c6315f46c01692e0b4a3dd9c76db20b1 441 Pfam PF07690 Major Facilitator Superfamily 20 368 7.8E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS02510 c6315f46c01692e0b4a3dd9c76db20b1 441 PANTHER PTHR23508 1 427 1.1E-131 T 22-04-2016 RMET_RS02510 c6315f46c01692e0b4a3dd9c76db20b1 441 Gene3D G3DSA:1.20.1250.20 225 406 4.7E-17 T 22-04-2016 RMET_RS02510 c6315f46c01692e0b4a3dd9c76db20b1 441 Gene3D G3DSA:1.20.1250.20 14 193 2.7E-28 T 22-04-2016 RMET_RS14010 eb69906388206cf0cdc704df3b2c5e26 107 Pfam PF05164 Cell division protein ZapA 6 93 9.0E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like RMET_RS14010 eb69906388206cf0cdc704df3b2c5e26 107 PANTHER PTHR34981 2 99 6.2E-13 T 22-04-2016 RMET_RS14010 eb69906388206cf0cdc704df3b2c5e26 107 PANTHER PTHR34981:SF1 2 99 6.2E-13 T 22-04-2016 RMET_RS14010 eb69906388206cf0cdc704df3b2c5e26 107 SUPERFAMILY SSF102829 5 99 3.92E-19 T 22-04-2016 IPR007838 Cell division protein ZapA-like RMET_RS12600 24016935de6551ca7564b8d6dc0281a4 395 SUPERFAMILY SSF53383 3 383 2.45E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS12600 24016935de6551ca7564b8d6dc0281a4 395 PANTHER PTHR11751:SF294 12 387 3.1E-129 T 22-04-2016 RMET_RS12600 24016935de6551ca7564b8d6dc0281a4 395 Gene3D G3DSA:3.90.1150.10 265 382 2.4E-12 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS12600 24016935de6551ca7564b8d6dc0281a4 395 Pfam PF00155 Aminotransferase class I and II 47 374 5.7E-33 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS12600 24016935de6551ca7564b8d6dc0281a4 395 Gene3D G3DSA:3.40.640.10 57 264 9.2E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS12600 24016935de6551ca7564b8d6dc0281a4 395 PANTHER PTHR11751 12 387 3.1E-129 T 22-04-2016 RMET_RS05425 217c293f000e4edfd9e395e676aa1ed5 289 PIRSF PIRSF004808 23 282 4.4E-60 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RMET_RS05425 217c293f000e4edfd9e395e676aa1ed5 289 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 26 274 3.2E-52 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RMET_RS05425 217c293f000e4edfd9e395e676aa1ed5 289 SUPERFAMILY SSF75217 27 197 6.15E-29 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RMET_RS05425 217c293f000e4edfd9e395e676aa1ed5 289 Pfam PF00588 SpoU rRNA Methylase family 28 187 1.4E-28 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RMET_RS05425 217c293f000e4edfd9e395e676aa1ed5 289 PANTHER PTHR12029 131 214 2.0E-26 T 22-04-2016 RMET_RS05425 217c293f000e4edfd9e395e676aa1ed5 289 PANTHER PTHR12029 28 113 2.0E-26 T 22-04-2016 RMET_RS05425 217c293f000e4edfd9e395e676aa1ed5 289 Gene3D G3DSA:3.40.1280.10 26 193 4.2E-26 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 Pfam PF03741 Integral membrane protein TerC family 14 203 1.6E-45 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 SUPERFAMILY SSF56176 432 519 1.74E-16 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 SMART SM01091 433 515 1.3E-18 T 22-04-2016 IPR005170 Transporter-associated domain RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 SUPERFAMILY SSF54631 287 423 6.82E-19 T 22-04-2016 RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 Pfam PF03471 Transporter associated domain 434 512 2.9E-18 T 22-04-2016 IPR005170 Transporter-associated domain RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 PANTHER PTHR22777 1 509 6.1E-211 T 22-04-2016 RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 Pfam PF00571 CBS domain 369 420 1.0E-6 T 22-04-2016 IPR000644 CBS domain RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 Gene3D G3DSA:3.10.580.10 285 427 3.6E-13 T 22-04-2016 RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 PANTHER PTHR22777:SF15 1 509 6.1E-211 T 22-04-2016 RMET_RS08825 791b256f84a8121aeefdb725b3a42871 530 Gene3D G3DSA:3.30.465.10 428 513 4.2E-20 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 SMART SM01387 8 88 2.0E-52 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-30 T 22-04-2016 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 SUPERFAMILY SSF47060 6 89 1.8E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.2E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 89 22.207 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 Gene3D G3DSA:1.10.287.10 6 89 3.4E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 PANTHER PTHR23321 1 88 8.8E-42 T 22-04-2016 RMET_RS04635 3cba7f1398f2d783003b43645a5f01c5 89 Pfam PF00312 Ribosomal protein S15 8 88 2.9E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 PIRSF PIRSF001434 1 426 4.9E-127 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 Gene3D G3DSA:3.40.640.10 5 287 3.2E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 PANTHER PTHR11808:SF12 4 236 9.2E-206 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 PANTHER PTHR11808:SF12 266 427 9.2E-206 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 Gene3D G3DSA:3.90.1150.10 289 425 1.3E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 423 1.2E-130 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 1.9E-169 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 SUPERFAMILY SSF53383 5 423 1.81E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 PANTHER PTHR11808 4 236 9.2E-206 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS05705 45d7388976b0599ca0d1bf0db274e432 433 PANTHER PTHR11808 266 427 9.2E-206 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS07040 f098b84a0fda03f93faa0bb30be8df53 317 SUPERFAMILY SSF52141 133 309 3.2E-64 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS07040 f098b84a0fda03f93faa0bb30be8df53 317 SMART SM00987 157 304 4.8E-45 T 22-04-2016 RMET_RS07040 f098b84a0fda03f93faa0bb30be8df53 317 PANTHER PTHR33693:SF1 136 317 4.1E-74 T 22-04-2016 RMET_RS07040 f098b84a0fda03f93faa0bb30be8df53 317 Pfam PF03167 Uracil DNA glycosylase superfamily 157 303 1.5E-46 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS07040 f098b84a0fda03f93faa0bb30be8df53 317 PANTHER PTHR33693 136 317 4.1E-74 T 22-04-2016 RMET_RS07040 f098b84a0fda03f93faa0bb30be8df53 317 Gene3D G3DSA:3.40.470.10 132 311 3.3E-71 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS07040 f098b84a0fda03f93faa0bb30be8df53 317 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 143 304 3.7E-65 T 22-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RMET_RS07040 f098b84a0fda03f93faa0bb30be8df53 317 SMART SM00986 157 304 4.8E-45 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS11720 6d4cc018226535e899e4b82bb592a9a9 729 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 657 7.7E-267 T 22-04-2016 IPR022458 Conjugative coupling factor TraG/TraD RMET_RS11720 6d4cc018226535e899e4b82bb592a9a9 729 Pfam PF12696 TraM recognition site of TraD and TraG 509 636 3.7E-10 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site RMET_RS11720 6d4cc018226535e899e4b82bb592a9a9 729 Gene3D G3DSA:3.40.50.300 167 268 4.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11720 6d4cc018226535e899e4b82bb592a9a9 729 Gene3D G3DSA:3.40.50.300 445 661 4.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11720 6d4cc018226535e899e4b82bb592a9a9 729 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 657 0.0 T 22-04-2016 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 RMET_RS11720 6d4cc018226535e899e4b82bb592a9a9 729 SUPERFAMILY SSF52540 399 659 2.63E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11720 6d4cc018226535e899e4b82bb592a9a9 729 SUPERFAMILY SSF52540 146 344 2.63E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 Pfam PF00437 Type II/IV secretion system protein 12 266 2.5E-47 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 SMART SM00382 122 247 0.0021 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 9.9E-151 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 Gene3D G3DSA:3.30.450.90 4 98 5.5E-4 T 22-04-2016 RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 Gene3D G3DSA:3.40.50.300 100 343 2.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 PANTHER PTHR30486:SF6 1 346 9.0E-182 T 22-04-2016 RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 SUPERFAMILY SSF52540 5 336 9.77E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14715 bc288037ab4d2fc4fa8dceebae83087d 347 PANTHER PTHR30486 1 346 9.0E-182 T 22-04-2016 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 PANTHER PTHR33175 1 91 5.6E-35 T 22-04-2016 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 SUPERFAMILY SSF47729 1 91 8.83E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.1E-28 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 Gene3D G3DSA:4.10.520.10 1 92 7.0E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 SMART SM00411 1 91 1.8E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.4E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.4E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS17775 cb8232b87b4f5710329fc6705d902590 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.4E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 SUPERFAMILY SSF50331 236 351 8.02E-23 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 Pfam PF00005 ABC transporter 21 160 1.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 PANTHER PTHR24220 4 239 2.8E-96 T 22-04-2016 RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 Gene3D G3DSA:2.40.50.140 282 335 2.9E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 Gene3D G3DSA:3.40.50.300 3 227 2.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 Pfam PF08402 TOBE domain 272 343 1.2E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 SUPERFAMILY SSF52540 4 241 2.85E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 PANTHER PTHR24220:SF282 4 239 2.8E-96 T 22-04-2016 RMET_RS11215 c6c383eec8fc83329e32746d10234951 374 SMART SM00382 27 209 2.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 SUPERFAMILY SSF52980 1005 1146 2.04E-7 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 PANTHER PTHR11070 799 862 6.5E-75 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 PANTHER PTHR11070 122 211 6.5E-75 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 PANTHER PTHR11070 569 717 6.5E-75 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 PANTHER PTHR11070 21 91 6.5E-75 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 PANTHER PTHR11070 336 542 6.5E-75 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 PANTHER PTHR11070 894 1169 6.5E-75 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Pfam PF13361 UvrD-like helicase C-terminal domain 773 919 6.2E-13 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Gene3D G3DSA:3.40.50.300 891 928 1.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Gene3D G3DSA:3.40.50.300 821 856 1.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Gene3D G3DSA:3.40.50.300 491 646 1.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Gene3D G3DSA:3.40.50.300 130 190 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Gene3D G3DSA:3.40.50.300 371 474 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Gene3D G3DSA:3.40.50.300 21 78 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1004 1145 2.0E-7 T 22-04-2016 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 474 9.6E-46 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 SUPERFAMILY SSF52540 22 82 6.2E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 SUPERFAMILY SSF52540 822 850 6.2E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 SUPERFAMILY SSF52540 574 794 6.2E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 SUPERFAMILY SSF52540 361 543 6.2E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 SUPERFAMILY SSF52540 122 202 6.2E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 SUPERFAMILY SSF52540 895 921 6.2E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10670 fc269024cd02a54b9c0ad12c89aefe25 1187 Gene3D G3DSA:1.10.486.10 647 783 1.5E-10 T 22-04-2016 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 Gene3D G3DSA:3.40.50.920 713 893 6.5E-76 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 SUPERFAMILY SSF52922 707 893 3.59E-59 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 13 894 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624:SF67 368 455 0.0 T 22-04-2016 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624:SF67 479 541 0.0 T 22-04-2016 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624:SF67 82 300 0.0 T 22-04-2016 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624:SF67 559 775 0.0 T 22-04-2016 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624:SF67 794 877 0.0 T 22-04-2016 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 Gene3D G3DSA:3.40.50.970 477 710 3.9E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 Gene3D G3DSA:3.40.50.970 65 473 2.3E-153 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PIRSF PIRSF000156 5 895 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624 368 455 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624 479 541 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624 82 300 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624 559 775 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 PANTHER PTHR11624 794 877 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 SUPERFAMILY SSF52518 478 705 4.12E-98 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 SUPERFAMILY SSF52518 65 472 1.83E-137 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS06035 bcddae841be47edfe16d4df4915ba76f 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 91 298 1.1E-8 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS14850 e999b194074ad942fc0d67ede0c74282 265 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 28 265 1.4E-60 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RMET_RS14850 e999b194074ad942fc0d67ede0c74282 265 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 37 265 3.6E-86 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RMET_RS17720 9dac4771e8cdc7241f615b9c9f42940c 322 Gene3D G3DSA:3.40.50.720 147 307 3.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS17720 9dac4771e8cdc7241f615b9c9f42940c 322 PANTHER PTHR13812:SF19 2 314 1.9E-49 T 22-04-2016 RMET_RS17720 9dac4771e8cdc7241f615b9c9f42940c 322 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 22 257 1.3E-36 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RMET_RS17720 9dac4771e8cdc7241f615b9c9f42940c 322 SUPERFAMILY SSF51735 7 321 8.02E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS17720 9dac4771e8cdc7241f615b9c9f42940c 322 Gene3D G3DSA:3.30.1780.10 10 146 4.3E-40 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal RMET_RS17720 9dac4771e8cdc7241f615b9c9f42940c 322 PIRSF PIRSF001439 1 322 8.4E-58 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RMET_RS17720 9dac4771e8cdc7241f615b9c9f42940c 322 PANTHER PTHR13812 2 314 1.9E-49 T 22-04-2016 RMET_RS11525 b59c794265816c576dbae7887dd55ab9 263 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 225 1.1E-88 T 22-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 RMET_RS11525 b59c794265816c576dbae7887dd55ab9 263 Pfam PF08900 Domain of unknown function (DUF1845) 12 222 2.1E-79 T 22-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 SUPERFAMILY SSF47384 155 224 7.26E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 SUPERFAMILY SSF55874 232 385 4.98E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 SMART SM00387 268 387 2.6E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 269 386 1.7E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 PANTHER PTHR24423:SF488 43 386 6.0E-84 T 22-04-2016 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 Pfam PF00512 His Kinase A (phospho-acceptor) domain 165 224 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 Gene3D G3DSA:3.30.450.20 43 131 7.3E-10 T 22-04-2016 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 Gene3D G3DSA:3.30.565.10 230 386 4.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 PANTHER PTHR24423 43 386 6.0E-84 T 22-04-2016 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 367 2.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 2.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 385 2.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 348 2.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 Gene3D G3DSA:1.10.287.130 155 221 4.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS10305 b981311912524ce2eb03e4ac75abca4a 387 SMART SM00388 163 228 4.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.2E-93 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 PANTHER PTHR12532 1 241 2.1E-109 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.187 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 Pfam PF01709 Transcriptional regulator 5 237 2.1E-94 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 SUPERFAMILY SSF75625 3 238 4.45E-95 T 22-04-2016 IPR029072 YebC-like RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 Gene3D G3DSA:1.10.10.200 1 79 1.7E-35 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 Gene3D G3DSA:3.30.70.980 135 205 5.4E-28 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 Gene3D G3DSA:3.30.1270.10 212 240 5.5E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RMET_RS03940 79d8e19ea974dead6ce9aefe76fdd78e 241 Gene3D G3DSA:3.30.1270.10 82 134 5.5E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 Gene3D G3DSA:1.10.10.10 14 96 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03330 e5deee53828f721675edc930b2aff575 313 PANTHER PTHR30537 10 303 1.8E-72 T 22-04-2016 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 SUPERFAMILY SSF53850 107 306 3.62E-28 T 22-04-2016 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 PANTHER PTHR30537:SF26 10 303 1.8E-72 T 22-04-2016 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 3.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 Gene3D G3DSA:3.40.190.10 107 190 8.2E-18 T 22-04-2016 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 SUPERFAMILY SSF46785 15 96 7.03E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03330 e5deee53828f721675edc930b2aff575 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS03330 e5deee53828f721675edc930b2aff575 313 Pfam PF03466 LysR substrate binding domain 107 301 9.0E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS03330 e5deee53828f721675edc930b2aff575 313 Gene3D G3DSA:3.40.190.10 191 266 8.6E-15 T 22-04-2016 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 13 444 6.8E-175 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 Gene3D G3DSA:3.40.440.10 11 101 7.2E-67 T 22-04-2016 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 Gene3D G3DSA:3.40.440.10 204 273 7.2E-67 T 22-04-2016 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 PANTHER PTHR11846 5 443 9.5E-234 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 18 25 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 Gene3D G3DSA:1.10.300.10 110 203 6.6E-38 T 22-04-2016 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 Gene3D G3DSA:3.90.170.10 274 440 4.2E-64 T 22-04-2016 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 SMART SM00788 11 439 6.4E-294 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 SUPERFAMILY SSF52540 11 444 2.23E-170 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 Pfam PF00709 Adenylosuccinate synthetase 12 438 4.6E-173 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 RMET_RS10495 72ae95720b1cd11ea1fc76014d7e7e88 447 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 447 210.971 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RMET_RS03265 fa9d87dc82c602fd0b66ced57265f4c9 620 Pfam PF13629 Pilus formation protein N terminal region 89 158 9.6E-19 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal RMET_RS03265 fa9d87dc82c602fd0b66ced57265f4c9 620 PRINTS PR00811 Bacterial general secretion pathway protein D signature 295 319 8.4E-11 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS03265 fa9d87dc82c602fd0b66ced57265f4c9 620 PRINTS PR00811 Bacterial general secretion pathway protein D signature 434 452 8.4E-11 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS03265 fa9d87dc82c602fd0b66ced57265f4c9 620 PRINTS PR00811 Bacterial general secretion pathway protein D signature 236 246 8.4E-11 T 22-04-2016 IPR001775 GspD/PilQ family RMET_RS03265 fa9d87dc82c602fd0b66ced57265f4c9 620 PANTHER PTHR30332 234 539 1.2E-63 T 22-04-2016 RMET_RS03265 fa9d87dc82c602fd0b66ced57265f4c9 620 Pfam PF00263 Bacterial type II and III secretion system protein 300 470 1.1E-42 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RMET_RS15275 dd2d833f8c3797e69c3808c3f6c9b82f 190 SUPERFAMILY SSF101307 34 188 5.62E-33 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RMET_RS15275 dd2d833f8c3797e69c3808c3f6c9b82f 190 Pfam PF04608 Phosphatidylglycerophosphatase A 41 187 1.3E-45 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RMET_RS15275 dd2d833f8c3797e69c3808c3f6c9b82f 190 PIRSF PIRSF006162 30 190 1.2E-36 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RMET_RS15275 dd2d833f8c3797e69c3808c3f6c9b82f 190 PANTHER PTHR36305 26 190 3.7E-39 T 22-04-2016 RMET_RS00185 f43de20dc02ba92152a2a846dfd4eea9 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 1.4E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RMET_RS00185 f43de20dc02ba92152a2a846dfd4eea9 270 PIRSF PIRSF003092 1 270 3.2E-91 T 22-04-2016 IPR025501 ATP binding protein MinD RMET_RS00185 f43de20dc02ba92152a2a846dfd4eea9 270 PANTHER PTHR13696:SF1 1 257 1.1E-86 T 22-04-2016 RMET_RS00185 f43de20dc02ba92152a2a846dfd4eea9 270 PANTHER PTHR13696 1 257 1.1E-86 T 22-04-2016 RMET_RS00185 f43de20dc02ba92152a2a846dfd4eea9 270 SUPERFAMILY SSF52540 1 268 3.58E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00185 f43de20dc02ba92152a2a846dfd4eea9 270 Gene3D G3DSA:3.40.50.300 1 247 1.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00185 f43de20dc02ba92152a2a846dfd4eea9 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 1.7E-106 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 PANTHER PTHR11751 107 131 1.3E-17 T 22-04-2016 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 PANTHER PTHR11751 12 79 1.3E-17 T 22-04-2016 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.7E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.7E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 Gene3D G3DSA:1.10.10.10 9 74 5.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 2.6E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 Pfam PF07702 UTRA domain 98 234 5.4E-26 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 SUPERFAMILY SSF46785 9 89 3.19E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 SMART SM00345 18 77 1.2E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 SMART SM00866 98 237 1.5E-24 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 240 3.0E-75 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 Gene3D G3DSA:3.40.1410.10 75 240 1.2E-35 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RMET_RS03850 2663b6190198d4b446a0054f599d16d3 244 SUPERFAMILY SSF64288 65 240 1.22E-35 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RMET_RS17460 1b82b278d677e6caecb5feda2d2d1e3f 500 Gene3D G3DSA:3.80.30.20 79 274 9.0E-30 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RMET_RS17460 1b82b278d677e6caecb5feda2d2d1e3f 500 PANTHER PTHR13932 15 478 1.1E-206 T 22-04-2016 RMET_RS17460 1b82b278d677e6caecb5feda2d2d1e3f 500 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 36 474 3.0E-168 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 RMET_RS17460 1b82b278d677e6caecb5feda2d2d1e3f 500 Pfam PF04055 Radical SAM superfamily 83 255 4.6E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS17460 1b82b278d677e6caecb5feda2d2d1e3f 500 SMART SM00729 78 299 2.4E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS17460 1b82b278d677e6caecb5feda2d2d1e3f 500 PIRSF PIRSF000167 27 480 6.3E-164 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 RMET_RS17460 1b82b278d677e6caecb5feda2d2d1e3f 500 PANTHER PTHR13932:SF6 15 478 1.1E-206 T 22-04-2016 RMET_RS17460 1b82b278d677e6caecb5feda2d2d1e3f 500 SUPERFAMILY SSF102114 33 471 4.97E-130 T 22-04-2016 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 SUPERFAMILY SSF52210 128 292 3.53E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 Gene3D G3DSA:3.40.50.261 125 292 1.4E-71 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 Pfam PF00549 CoA-ligase 156 271 2.4E-15 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 PANTHER PTHR11117:SF2 1 293 1.4E-162 T 22-04-2016 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 8.5E-34 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 PRINTS PR01798 Succinyl-CoA synthase signature 245 262 8.5E-34 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 PRINTS PR01798 Succinyl-CoA synthase signature 213 226 8.5E-34 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 PRINTS PR01798 Succinyl-CoA synthase signature 182 200 8.5E-34 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 SUPERFAMILY SSF51735 1 127 9.09E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 241 254 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 Gene3D G3DSA:3.40.50.720 2 124 2.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 293 8.0E-128 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 PIRSF PIRSF001553 1 293 4.3E-118 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 Pfam PF02629 CoA binding domain 6 102 3.9E-24 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 SMART SM00881 4 103 1.6E-29 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 157 186 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RMET_RS02380 e409977f178ddb2f780ff15d746ad718 293 PANTHER PTHR11117 1 293 1.4E-162 T 22-04-2016 RMET_RS02620 5f8f6b4799c4fd1545046f6409fe917e 163 SUPERFAMILY SSF55826 7 159 7.06E-40 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS02620 5f8f6b4799c4fd1545046f6409fe917e 163 Pfam PF04073 Aminoacyl-tRNA editing domain 40 149 1.5E-24 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS02620 5f8f6b4799c4fd1545046f6409fe917e 163 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 10 156 1.2E-46 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RMET_RS02620 5f8f6b4799c4fd1545046f6409fe917e 163 PANTHER PTHR30411 10 154 6.8E-44 T 22-04-2016 RMET_RS02620 5f8f6b4799c4fd1545046f6409fe917e 163 PANTHER PTHR30411:SF0 10 154 6.8E-44 T 22-04-2016 RMET_RS02620 5f8f6b4799c4fd1545046f6409fe917e 163 Gene3D G3DSA:3.90.960.10 3 159 1.5E-47 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS02620 5f8f6b4799c4fd1545046f6409fe917e 163 PIRSF PIRSF006181 5 161 9.6E-45 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RMET_RS14090 178411ab1197add6d2b74ce5c9ad25a9 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 2.4E-115 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 RMET_RS14090 178411ab1197add6d2b74ce5c9ad25a9 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 347 1.2E-58 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RMET_RS14090 178411ab1197add6d2b74ce5c9ad25a9 372 PANTHER PTHR33529 1 347 6.8E-61 T 22-04-2016 RMET_RS14090 178411ab1197add6d2b74ce5c9ad25a9 372 PANTHER PTHR33529:SF2 1 347 6.8E-61 T 22-04-2016 RMET_RS09200 4444a3b88ec0969c9fa8019179b5e173 452 Gene3D G3DSA:1.20.1250.20 263 444 1.9E-20 T 22-04-2016 RMET_RS09200 4444a3b88ec0969c9fa8019179b5e173 452 Pfam PF07690 Major Facilitator Superfamily 39 411 2.5E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS09200 4444a3b88ec0969c9fa8019179b5e173 452 PANTHER PTHR11662:SF3 23 444 7.7E-154 T 22-04-2016 RMET_RS09200 4444a3b88ec0969c9fa8019179b5e173 452 Gene3D G3DSA:1.20.1250.20 30 231 4.4E-46 T 22-04-2016 RMET_RS09200 4444a3b88ec0969c9fa8019179b5e173 452 PANTHER PTHR11662 23 444 7.7E-154 T 22-04-2016 RMET_RS09200 4444a3b88ec0969c9fa8019179b5e173 452 SUPERFAMILY SSF103473 18 447 7.59E-85 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 Pfam PF09397 Ftsk gamma domain 706 766 1.8E-26 T 22-04-2016 IPR018541 FtsK gamma domain RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 PANTHER PTHR22683 228 767 4.8E-258 T 22-04-2016 RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 Gene3D G3DSA:3.40.50.300 358 661 3.4E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 SMART SM00843 704 769 1.4E-37 T 22-04-2016 IPR018541 FtsK gamma domain RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 SUPERFAMILY SSF52540 358 665 5.71E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 PANTHER PTHR22683:SF41 228 767 4.8E-258 T 22-04-2016 RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 SUPERFAMILY SSF46785 704 768 4.63E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 21 199 2.5E-50 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region RMET_RS03455 e6053a7fbc099cdb888d41420febf61c 775 Pfam PF01580 FtsK/SpoIIIE family 385 594 2.6E-62 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 Gene3D G3DSA:3.90.230.10 189 459 1.6E-79 T 22-04-2016 IPR000994 Peptidase M24, structural domain RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 362 374 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 Pfam PF05195 Aminopeptidase P, N-terminal domain 14 133 2.0E-35 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 Gene3D G3DSA:3.40.350.10 13 188 2.2E-48 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 PANTHER PTHR10804 14 458 4.8E-141 T 22-04-2016 RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 PANTHER PTHR10804:SF17 14 458 4.8E-141 T 22-04-2016 RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 SUPERFAMILY SSF53092 14 184 5.75E-48 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 Pfam PF00557 Metallopeptidase family M24 192 435 2.1E-64 T 22-04-2016 IPR000994 Peptidase M24, structural domain RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 SUPERFAMILY SSF55920 186 460 1.7E-79 T 22-04-2016 IPR000994 Peptidase M24, structural domain RMET_RS02180 82d96bb208a65af4fa7150c2999f184a 465 SMART SM01011 7 146 3.0E-60 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RMET_RS15080 58645e709c2766534c5c2b4228f0120d 302 Pfam PF05621 Bacterial TniB protein 27 278 1.4E-104 T 22-04-2016 IPR008868 Bacterial TniB RMET_RS15080 58645e709c2766534c5c2b4228f0120d 302 SUPERFAMILY SSF52540 33 228 1.51E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15080 58645e709c2766534c5c2b4228f0120d 302 Gene3D G3DSA:3.40.50.300 26 207 7.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03510 5804a6d53055da592266685393b8bf43 154 Gene3D G3DSA:3.30.700.10 15 110 1.6E-21 T 22-04-2016 RMET_RS03510 5804a6d53055da592266685393b8bf43 154 Pfam PF00114 Pilin (bacterial filament) 43 151 5.7E-13 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RMET_RS03510 5804a6d53055da592266685393b8bf43 154 PANTHER PTHR30093 1 63 3.6E-19 T 22-04-2016 RMET_RS03510 5804a6d53055da592266685393b8bf43 154 Pfam PF13633 Prokaryotic N-terminal methylation site 12 38 7.0E-13 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS03510 5804a6d53055da592266685393b8bf43 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 8.8E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS03510 5804a6d53055da592266685393b8bf43 154 SUPERFAMILY SSF54523 15 151 3.3E-24 T 22-04-2016 RMET_RS03510 5804a6d53055da592266685393b8bf43 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 1.8E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RMET_RS03510 5804a6d53055da592266685393b8bf43 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 1.8E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RMET_RS03510 5804a6d53055da592266685393b8bf43 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS15955 8e3138cfd39b62f9c79dd282f75c8434 207 Pfam PF01928 CYTH domain 3 201 1.5E-29 T 22-04-2016 IPR023577 CYTH domain RMET_RS15955 8e3138cfd39b62f9c79dd282f75c8434 207 SMART SM01118 2 207 1.5E-34 T 22-04-2016 IPR023577 CYTH domain RMET_RS15955 8e3138cfd39b62f9c79dd282f75c8434 207 PANTHER PTHR39569 2 207 2.3E-42 T 22-04-2016 RMET_RS15955 8e3138cfd39b62f9c79dd282f75c8434 207 Gene3D G3DSA:2.40.320.10 2 204 3.6E-31 T 22-04-2016 IPR023577 CYTH domain RMET_RS15955 8e3138cfd39b62f9c79dd282f75c8434 207 PANTHER PTHR39569:SF1 2 207 2.3E-42 T 22-04-2016 RMET_RS15955 8e3138cfd39b62f9c79dd282f75c8434 207 SUPERFAMILY SSF55154 1 204 9.16E-41 T 22-04-2016 IPR033469 CYTH-like domain RMET_RS06540 3739ab38384d5777c19087561e43037f 364 Gene3D G3DSA:4.10.480.10 224 306 2.4E-39 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RMET_RS06540 3739ab38384d5777c19087561e43037f 364 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 42 4.7E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PIRSF PIRSF000310 2 354 4.5E-146 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 305 2.8E-32 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RMET_RS06540 3739ab38384d5777c19087561e43037f 364 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 7.1E-30 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 353 9.9E-174 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PANTHER PTHR30013 1 364 8.5E-279 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 281 294 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 6.5E-122 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 SUPERFAMILY SSF56770 44 307 9.16E-91 T 22-04-2016 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 PANTHER PTHR30013:SF6 1 364 8.5E-279 T 22-04-2016 RMET_RS06540 3739ab38384d5777c19087561e43037f 364 Gene3D G3DSA:3.40.50.700 46 223 8.9E-60 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 PANTHER PTHR32179 1 286 5.6E-110 T 22-04-2016 RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 SUPERFAMILY SSF54675 13 119 3.65E-31 T 22-04-2016 RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 22 285 3.3E-86 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 Gene3D G3DSA:3.20.20.70 141 274 1.1E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 PIRSF PIRSF006250 13 287 1.3E-88 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 Gene3D G3DSA:3.90.1170.20 16 140 5.0E-47 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 SUPERFAMILY SSF51690 120 285 9.03E-56 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 30 118 8.2E-24 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RMET_RS14405 3307eba7edd373ef1e625a0757d194a6 287 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 120 283 7.4E-52 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RMET_RS13860 c07c9f7dcb52d2780920ba5f2242c5e4 71 PIRSF PIRSF036704 1 70 1.3E-16 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing RMET_RS13860 c07c9f7dcb52d2780920ba5f2242c5e4 71 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 69 2.1E-16 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing RMET_RS14500 dd4c5b6861acb76e56f96c34062c1ba0 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 103 1.8E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 RMET_RS14500 dd4c5b6861acb76e56f96c34062c1ba0 108 PANTHER PTHR33473 18 106 9.5E-34 T 22-04-2016 RMET_RS14500 dd4c5b6861acb76e56f96c34062c1ba0 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 103 28.834 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RMET_RS14500 dd4c5b6861acb76e56f96c34062c1ba0 108 Gene3D G3DSA:3.30.1390.10 10 108 1.4E-42 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RMET_RS14500 dd4c5b6861acb76e56f96c34062c1ba0 108 SUPERFAMILY SSF54736 23 107 1.26E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RMET_RS13005 d903367bbd882cc5fc9aa85edcdbdfef 327 Pfam PF03812 2-keto-3-deoxygluconate permease 5 313 2.2E-117 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 RMET_RS13005 d903367bbd882cc5fc9aa85edcdbdfef 327 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 16 319 4.0E-105 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 RMET_RS13005 d903367bbd882cc5fc9aa85edcdbdfef 327 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 3 319 31.834 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 RMET_RS01985 8076a846994f7a5515c0136a2313536e 352 SUPERFAMILY SSF53850 38 275 9.56E-35 T 22-04-2016 RMET_RS01985 8076a846994f7a5515c0136a2313536e 352 Gene3D G3DSA:3.40.190.10 125 253 7.3E-13 T 22-04-2016 RMET_RS01985 8076a846994f7a5515c0136a2313536e 352 Pfam PF09084 NMT1/THI5 like 52 267 6.7E-39 T 22-04-2016 IPR015168 SsuA/THI5-like RMET_RS01985 8076a846994f7a5515c0136a2313536e 352 PANTHER PTHR31528 1 352 1.6E-62 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 RMET_RS05380 a2349dbdcd61749600683c0e6d703596 262 Pfam PF12706 Beta-lactamase superfamily domain 27 211 9.7E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS05380 a2349dbdcd61749600683c0e6d703596 262 SUPERFAMILY SSF56281 2 235 8.39E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS05380 a2349dbdcd61749600683c0e6d703596 262 PANTHER PTHR13754 2 261 1.9E-54 T 22-04-2016 RMET_RS05380 a2349dbdcd61749600683c0e6d703596 262 PANTHER PTHR13754:SF15 2 261 1.9E-54 T 22-04-2016 RMET_RS05380 a2349dbdcd61749600683c0e6d703596 262 SMART SM00849 12 195 0.0018 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS05380 a2349dbdcd61749600683c0e6d703596 262 Gene3D G3DSA:3.60.15.10 1 237 1.0E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Pfam PF00384 Molybdopterin oxidoreductase 165 621 4.2E-58 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Pfam PF01568 Molydopterin dinucleotide binding domain 891 1017 2.4E-18 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 PANTHER PTHR11615:SF140 448 551 5.4E-290 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 PANTHER PTHR11615:SF140 799 1021 5.4E-290 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 PANTHER PTHR11615:SF140 57 429 5.4E-290 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 PANTHER PTHR11615:SF140 567 659 5.4E-290 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 113 130 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Gene3D G3DSA:2.20.25.90 110 162 7.8E-15 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Gene3D G3DSA:3.40.228.10 240 423 1.7E-62 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Gene3D G3DSA:3.40.50.740 165 239 1.0E-77 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Gene3D G3DSA:3.40.50.740 424 694 1.0E-77 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 PANTHER PTHR11615 448 551 5.4E-290 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 PANTHER PTHR11615 799 1021 5.4E-290 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 PANTHER PTHR11615 57 429 5.4E-290 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 PANTHER PTHR11615 567 659 5.4E-290 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 SUPERFAMILY SSF50692 855 1023 5.42E-39 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 SMART SM00926 108 162 2.2E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 SUPERFAMILY SSF53706 109 671 8.9E-202 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Gene3D G3DSA:2.40.40.20 837 848 4.8E-52 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Gene3D G3DSA:2.40.40.20 885 1023 4.8E-52 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Gene3D G3DSA:2.40.40.20 708 741 4.8E-52 T 22-04-2016 RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 66 95 6.6E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RMET_RS13855 329ce1b307efa35ec476ab892f8e21a7 1025 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 110 159 6.7E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RMET_RS04630 5fe3b959baf73fe83672391f63a32232 425 Pfam PF13458 Periplasmic binding protein 31 381 5.8E-73 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS04630 5fe3b959baf73fe83672391f63a32232 425 Gene3D G3DSA:3.40.50.2300 166 314 1.6E-24 T 22-04-2016 RMET_RS04630 5fe3b959baf73fe83672391f63a32232 425 PANTHER PTHR30483 1 422 9.0E-48 T 22-04-2016 RMET_RS04630 5fe3b959baf73fe83672391f63a32232 425 Gene3D G3DSA:3.40.50.2300 26 165 2.2E-32 T 22-04-2016 RMET_RS04630 5fe3b959baf73fe83672391f63a32232 425 Gene3D G3DSA:3.40.50.2300 315 374 2.2E-32 T 22-04-2016 RMET_RS04630 5fe3b959baf73fe83672391f63a32232 425 SUPERFAMILY SSF53822 31 387 1.41E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS09015 5a30ca32c2e0f717c1c57f07227784a2 183 PANTHER PTHR33164 14 161 3.1E-19 T 22-04-2016 RMET_RS09015 5a30ca32c2e0f717c1c57f07227784a2 183 Pfam PF12802 MarR family 43 101 2.5E-11 T 22-04-2016 RMET_RS09015 5a30ca32c2e0f717c1c57f07227784a2 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 1.4E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS09015 5a30ca32c2e0f717c1c57f07227784a2 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 1.4E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS09015 5a30ca32c2e0f717c1c57f07227784a2 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 1.4E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS09015 5a30ca32c2e0f717c1c57f07227784a2 183 Gene3D G3DSA:1.10.10.10 14 149 1.2E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09015 5a30ca32c2e0f717c1c57f07227784a2 183 SMART SM00347 37 137 1.1E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS09015 5a30ca32c2e0f717c1c57f07227784a2 183 SUPERFAMILY SSF46785 14 149 4.67E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02845 f464cbc3ea71577902709d7cd11cab0c 316 PANTHER PTHR23406 160 311 3.2E-15 T 22-04-2016 RMET_RS02845 f464cbc3ea71577902709d7cd11cab0c 316 PANTHER PTHR23406:SF1 160 311 3.2E-15 T 22-04-2016 RMET_RS02845 f464cbc3ea71577902709d7cd11cab0c 316 SUPERFAMILY SSF53659 13 303 2.18E-72 T 22-04-2016 RMET_RS02845 f464cbc3ea71577902709d7cd11cab0c 316 Pfam PF01515 Phosphate acetyl/butaryl transferase 87 300 4.7E-46 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RMET_RS02845 f464cbc3ea71577902709d7cd11cab0c 316 Gene3D G3DSA:3.40.50.10750 120 276 9.7E-52 T 22-04-2016 RMET_RS02845 f464cbc3ea71577902709d7cd11cab0c 316 PIRSF PIRSF000428 8 307 2.4E-89 T 22-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 PANTHER PTHR11059 2 573 6.8E-154 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 564 4.4E-153 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 Gene3D G3DSA:3.40.50.300 432 506 6.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 SUPERFAMILY SSF52540 292 506 3.2E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 SUPERFAMILY SSF52540 1 221 1.22E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 Gene3D G3DSA:3.40.50.300 1 210 8.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 Gene3D G3DSA:3.40.50.300 294 371 9.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 509 2.3E-20 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 PIRSF PIRSF003128 1 569 6.9E-155 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RMET_RS05020 f787d28c68c41a74014a89cb896ab04c 589 SUPERFAMILY SSF52540 3 50 3.2E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02870 3a04b3081cd0c1275e830e5ef3e0e8a5 179 Gene3D G3DSA:2.40.320.10 3 167 2.4E-36 T 22-04-2016 IPR023577 CYTH domain RMET_RS02870 3a04b3081cd0c1275e830e5ef3e0e8a5 179 Pfam PF01928 CYTH domain 3 159 1.9E-14 T 22-04-2016 IPR023577 CYTH domain RMET_RS02870 3a04b3081cd0c1275e830e5ef3e0e8a5 179 PANTHER PTHR21028 1 173 1.4E-43 T 22-04-2016 RMET_RS02870 3a04b3081cd0c1275e830e5ef3e0e8a5 179 SUPERFAMILY SSF55154 3 167 1.01E-34 T 22-04-2016 IPR033469 CYTH-like domain RMET_RS02870 3a04b3081cd0c1275e830e5ef3e0e8a5 179 PANTHER PTHR21028:SF2 1 173 1.4E-43 T 22-04-2016 RMET_RS02870 3a04b3081cd0c1275e830e5ef3e0e8a5 179 SMART SM01118 2 169 5.2E-15 T 22-04-2016 IPR023577 CYTH domain RMET_RS02870 3a04b3081cd0c1275e830e5ef3e0e8a5 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 33 129 3.0E-4 T 22-04-2016 RMET_RS08940 16ff55493580b8b05ecca07ecf843c92 90 SUPERFAMILY SSF56029 3 90 4.19E-34 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS08940 16ff55493580b8b05ecca07ecf843c92 90 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 10 84 6.0E-38 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS08940 16ff55493580b8b05ecca07ecf843c92 90 Pfam PF02406 MmoB/DmpM family 6 87 1.4E-33 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS08940 16ff55493580b8b05ecca07ecf843c92 90 Gene3D G3DSA:3.90.56.10 5 89 2.0E-34 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 SUPERFAMILY SSF48150 2 208 6.28E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 PANTHER PTHR10359:SF18 8 209 4.9E-86 T 22-04-2016 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 SMART SM00478 38 185 8.0E-53 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.0E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 PANTHER PTHR10359 8 209 4.9E-86 T 22-04-2016 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 Gene3D G3DSA:1.10.340.30 23 122 1.7E-33 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 Pfam PF00633 Helix-hairpin-helix motif 99 127 6.9E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.217 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.2E-86 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 PIRSF PIRSF001435 1 211 5.2E-51 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RMET_RS05100 18c7b805910e3f7787b950cd8a46f51d 214 Gene3D G3DSA:1.10.1670.10 123 208 2.7E-37 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RMET_RS09195 12f0785af090f9307c85525c9e673d1c 212 SUPERFAMILY SSF53639 3 210 1.82E-57 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS09195 12f0785af090f9307c85525c9e673d1c 212 SMART SM01007 9 187 6.4E-51 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS09195 12f0785af090f9307c85525c9e673d1c 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 186 6.5E-41 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS09195 12f0785af090f9307c85525c9e673d1c 212 PANTHER PTHR22789:SF6 1 208 2.2E-83 T 22-04-2016 RMET_RS09195 12f0785af090f9307c85525c9e673d1c 212 Gene3D G3DSA:3.40.225.10 3 209 2.0E-63 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS09195 12f0785af090f9307c85525c9e673d1c 212 PANTHER PTHR22789 1 208 2.2E-83 T 22-04-2016 RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 Gene3D G3DSA:1.10.10.10 8 75 1.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 PANTHER PTHR30136 13 262 1.4E-62 T 22-04-2016 RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 Pfam PF09339 IclR helix-turn-helix domain 18 69 1.1E-10 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 PANTHER PTHR30136:SF10 13 262 1.4E-62 T 22-04-2016 RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 SUPERFAMILY SSF46785 17 88 1.8E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 Gene3D G3DSA:3.30.450.40 84 259 1.8E-49 T 22-04-2016 IPR029016 GAF domain-like RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 SMART SM00346 16 104 8.2E-21 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 SUPERFAMILY SSF55781 81 259 4.25E-45 T 22-04-2016 IPR029016 GAF domain-like RMET_RS12995 6f882e1dd5fee0d8c5f44a1ae394fa6b 262 Pfam PF01614 Bacterial transcriptional regulator 132 256 6.8E-28 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS01535 1fe4960d7385ef1e23b8347a9765c58f 117 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 7.2E-26 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RMET_RS01535 1fe4960d7385ef1e23b8347a9765c58f 117 Gene3D G3DSA:3.30.160.100 1 100 2.7E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RMET_RS01535 1fe4960d7385ef1e23b8347a9765c58f 117 SUPERFAMILY SSF69754 1 107 2.22E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RMET_RS01535 1fe4960d7385ef1e23b8347a9765c58f 117 PANTHER PTHR33231 1 104 9.3E-32 T 22-04-2016 RMET_RS01535 1fe4960d7385ef1e23b8347a9765c58f 117 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 5.2E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RMET_RS29865 a13725c6e6d9d9e951a455d71ec5c2a7 149 PANTHER PTHR32552 19 149 8.7E-16 T 22-04-2016 RMET_RS29865 a13725c6e6d9d9e951a455d71ec5c2a7 149 Pfam PF13276 HTH-like domain 67 123 2.8E-18 T 22-04-2016 IPR025948 HTH-like domain RMET_RS04015 08479128784614fe3b49ac895dc80b3d 216 Gene3D G3DSA:1.10.3720.10 9 203 1.7E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS04015 08479128784614fe3b49ac895dc80b3d 216 PANTHER PTHR30177 1 216 4.9E-80 T 22-04-2016 RMET_RS04015 08479128784614fe3b49ac895dc80b3d 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 211 1.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS04015 08479128784614fe3b49ac895dc80b3d 216 SUPERFAMILY SSF161098 11 200 2.62E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS04015 08479128784614fe3b49ac895dc80b3d 216 PANTHER PTHR30177:SF4 1 216 4.9E-80 T 22-04-2016 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 50 65 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 312 335 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 PANTHER PTHR11958 18 441 3.8E-225 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 Gene3D G3DSA:1.10.3860.10 19 423 3.8E-108 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 PRINTS PR00173 Glutamate-aspartate symporter signature 309 335 1.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 PRINTS PR00173 Glutamate-aspartate symporter signature 162 184 1.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 PRINTS PR00173 Glutamate-aspartate symporter signature 21 41 1.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 PRINTS PR00173 Glutamate-aspartate symporter signature 209 228 1.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 PRINTS PR00173 Glutamate-aspartate symporter signature 344 363 1.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 PRINTS PR00173 Glutamate-aspartate symporter signature 88 113 1.7E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 SUPERFAMILY SSF118215 23 419 7.98E-109 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 Pfam PF00375 Sodium:dicarboxylate symporter family 23 418 1.5E-102 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS17305 430d3ee512a6d846ea04613364d567f7 467 PANTHER PTHR11958:SF47 18 441 3.8E-225 T 22-04-2016 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 193 1.3E-33 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 6 220 7.2E-52 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 Gene3D G3DSA:1.10.150.240 21 79 1.1E-8 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 SUPERFAMILY SSF56784 3 220 1.08E-54 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 PANTHER PTHR18901 1 220 1.2E-50 T 22-04-2016 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 Gene3D G3DSA:3.40.50.1000 80 222 1.4E-40 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 Gene3D G3DSA:3.40.50.1000 1 20 1.4E-40 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 190 1.1E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 187 1.7E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07615 2061415171cbf93f1ef5382af12e8142 243 PANTHER PTHR18901:SF14 1 220 1.2E-50 T 22-04-2016 RMET_RS09780 f451a2d868bc7e871ffbeb468cda2e79 173 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 173 73.773 T 22-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS09780 f451a2d868bc7e871ffbeb468cda2e79 173 Pfam PF02627 Carboxymuconolactone decarboxylase family 93 172 8.9E-15 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS09780 f451a2d868bc7e871ffbeb468cda2e79 173 Gene3D G3DSA:1.20.1290.10 4 170 7.6E-43 T 22-04-2016 IPR029032 AhpD-like RMET_RS09780 f451a2d868bc7e871ffbeb468cda2e79 173 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 161 4.6E-9 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS09780 f451a2d868bc7e871ffbeb468cda2e79 173 SUPERFAMILY SSF69118 3 172 6.54E-39 T 22-04-2016 IPR029032 AhpD-like RMET_RS13355 9815ad5456cd1edf9eb7ea15e1a01b43 178 Pfam PF11780 Protein of unknown function (DUF3318) 26 155 9.5E-28 T 22-04-2016 IPR021751 Protein of unknown function DUF3318 RMET_RS04670 839d5afd4270a7dfa982a180a97322d3 160 PANTHER PTHR11995 11 156 1.8E-124 T 22-04-2016 RMET_RS04670 839d5afd4270a7dfa982a180a97322d3 160 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 6.8E-78 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RMET_RS04670 839d5afd4270a7dfa982a180a97322d3 160 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 5.2E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RMET_RS04670 839d5afd4270a7dfa982a180a97322d3 160 Gene3D G3DSA:3.40.50.700 21 150 2.0E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RMET_RS04670 839d5afd4270a7dfa982a180a97322d3 160 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.092 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RMET_RS04670 839d5afd4270a7dfa982a180a97322d3 160 PANTHER PTHR11995:SF19 11 156 1.8E-124 T 22-04-2016 RMET_RS04670 839d5afd4270a7dfa982a180a97322d3 160 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RMET_RS04670 839d5afd4270a7dfa982a180a97322d3 160 SUPERFAMILY SSF56770 9 153 3.53E-67 T 22-04-2016 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 8.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 8.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 442 8.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 SMART SM00388 223 292 0.0048 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 PANTHER PTHR24423 98 106 5.7E-21 T 22-04-2016 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 PANTHER PTHR24423 200 459 5.7E-21 T 22-04-2016 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 SUPERFAMILY SSF55874 290 445 2.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00695 bdd89cc71239fede247286a857cae562 459 SMART SM00387 332 445 2.3E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00695 bdd89cc71239fede247286a857cae562 459 PANTHER PTHR24423:SF427 98 106 5.7E-21 T 22-04-2016 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 PANTHER PTHR24423:SF427 200 459 5.7E-21 T 22-04-2016 RMET_RS00695 bdd89cc71239fede247286a857cae562 459 Gene3D G3DSA:3.30.565.10 299 443 5.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00695 bdd89cc71239fede247286a857cae562 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 444 4.2E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12915 ceedbbcbd775cf4685a1117ff190a2ad 455 PANTHER PTHR30624:SF1 10 455 5.8E-143 T 22-04-2016 RMET_RS12915 ceedbbcbd775cf4685a1117ff190a2ad 455 PANTHER PTHR30624 10 455 5.8E-143 T 22-04-2016 RMET_RS12915 ceedbbcbd775cf4685a1117ff190a2ad 455 SUPERFAMILY SSF111283 16 455 4.05E-123 T 22-04-2016 RMET_RS12915 ceedbbcbd775cf4685a1117ff190a2ad 455 Pfam PF01523 Putative modulator of DNA gyrase 41 328 1.3E-53 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 Gene3D G3DSA:1.20.5.710 2 52 6.5E-24 T 22-04-2016 RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.5E-18 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 SUPERFAMILY SSF54736 53 124 1.27E-24 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 25.228 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 3.7E-30 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 Gene3D G3DSA:3.30.1390.10 53 124 1.7E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 3.4E-49 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 102 2.0E-16 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RMET_RS16725 488886340ee0272c99dfcc6e9b73a3fc 124 SUPERFAMILY SSF48300 3 60 2.49E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 SUPERFAMILY SSF56176 16 209 9.35E-54 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 Pfam PF01565 FAD binding domain 43 177 7.3E-32 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 PANTHER PTHR11748:SF86 1 462 2.8E-100 T 22-04-2016 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 PANTHER PTHR11748 1 462 2.8E-100 T 22-04-2016 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 Gene3D G3DSA:3.30.43.10 32 99 3.0E-12 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 43 76 - T 22-04-2016 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 Gene3D G3DSA:3.30.465.10 100 209 4.5E-19 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 SUPERFAMILY SSF55103 321 459 8.94E-6 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 SUPERFAMILY SSF55103 188 224 8.94E-6 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS17430 416ac681bbecbfb7015d5f3a02c7dda5 463 Pfam PF08031 Berberine and berberine like 416 459 2.3E-12 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 SUPERFAMILY SSF51569 1 315 5.65E-112 T 22-04-2016 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 Hamap MF_00492 Transaldolase [tal]. 1 317 50.024 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 PANTHER PTHR10683:SF18 1 315 1.7E-184 T 22-04-2016 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 Pfam PF00923 Transaldolase 13 311 1.9E-97 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 TIGRFAM TIGR00874 talAB: transaldolase 2 315 8.8E-140 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 PANTHER PTHR10683 1 315 1.7E-184 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 Gene3D G3DSA:3.20.20.70 1 315 1.4E-126 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS10455 e2cc955d5a140fb4e562e405ea1161db 318 ProSitePatterns PS00958 Transaldolase active site. 123 140 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS00880 0aac1c17da3df50de81f1e5a3b2d65d3 120 Pfam PF04993 TfoX N-terminal domain 23 113 2.7E-30 T 22-04-2016 IPR007076 TfoX, N-terminal RMET_RS00880 0aac1c17da3df50de81f1e5a3b2d65d3 120 SUPERFAMILY SSF159894 9 114 7.06E-29 T 22-04-2016 RMET_RS00880 0aac1c17da3df50de81f1e5a3b2d65d3 120 Gene3D G3DSA:3.30.1460.30 8 115 2.1E-35 T 22-04-2016 IPR007076 TfoX, N-terminal RMET_RS11535 76e50bafdd230fa75ddb1fe8555a8f21 146 PIRSF PIRSF002070 1 146 9.7E-27 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RMET_RS11535 76e50bafdd230fa75ddb1fe8555a8f21 146 SUPERFAMILY SSF50249 2 134 1.75E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS11535 76e50bafdd230fa75ddb1fe8555a8f21 146 Pfam PF00436 Single-strand binding protein family 5 109 2.2E-12 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RMET_RS11535 76e50bafdd230fa75ddb1fe8555a8f21 146 Gene3D G3DSA:2.40.50.140 3 113 1.0E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 Gene3D G3DSA:2.40.50.140 252 304 2.2E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 Gene3D G3DSA:3.40.50.300 3 234 7.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 Pfam PF00005 ABC transporter 20 161 5.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 SUPERFAMILY SSF50331 236 338 9.78E-10 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 PANTHER PTHR24220:SF151 5 281 7.9E-137 T 22-04-2016 RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 SMART SM00382 28 211 3.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 PANTHER PTHR24220 5 281 7.9E-137 T 22-04-2016 RMET_RS00065 94290a0590b1dc40fe44f33a67102c55 345 SUPERFAMILY SSF52540 4 242 2.13E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS25035 4a1c6f6121be391b1ba897b2c1cf2271 291 SUPERFAMILY SSF57997 93 186 6.87E-5 T 22-04-2016 RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 Pfam PF04397 LytTr DNA-binding domain 179 273 5.1E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 SMART SM00448 3 115 1.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 SUPERFAMILY SSF52172 3 127 3.27E-30 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 PANTHER PTHR26402 3 236 3.3E-38 T 22-04-2016 RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 PANTHER PTHR26402:SF524 3 236 3.3E-38 T 22-04-2016 RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 Gene3D G3DSA:3.40.50.2300 2 124 4.6E-30 T 22-04-2016 RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 Pfam PF00072 Response regulator receiver domain 6 114 4.2E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 Gene3D G3DSA:2.40.50.40 169 236 1.6E-17 T 22-04-2016 RMET_RS06960 d787444e951fe2ea46dd4ed7951864fb 273 SMART SM00850 177 273 5.9E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 455 464 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 PANTHER PTHR11993 2 123 7.5E-136 T 22-04-2016 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 PANTHER PTHR11993 142 216 7.5E-136 T 22-04-2016 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 PANTHER PTHR11993 271 471 7.5E-136 T 22-04-2016 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 SUPERFAMILY SSF56762 1 464 3.14E-117 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS07670 600279313da35b3a51617ddfdd155376 488 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 Gene3D G3DSA:1.10.645.10 1 464 1.1E-113 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS07670 600279313da35b3a51617ddfdd155376 488 Pfam PF00374 Nickel-dependent hydrogenase 264 464 4.2E-14 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 Pfam PF00374 Nickel-dependent hydrogenase 40 117 4.1E-11 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 PANTHER PTHR11993:SF9 2 123 7.5E-136 T 22-04-2016 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 PANTHER PTHR11993:SF9 142 216 7.5E-136 T 22-04-2016 RMET_RS07670 600279313da35b3a51617ddfdd155376 488 PANTHER PTHR11993:SF9 271 471 7.5E-136 T 22-04-2016 RMET_RS11705 d8a02907bef132b0f3d9ca1f69ca56bc 245 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 45 242 7.0E-86 T 22-04-2016 IPR022293 Integrating conjugative element protein, PFL4693 RMET_RS09220 ba17c450c34d903cd18e405084cc1f80 327 PIRSF PIRSF017082 1 326 1.2E-87 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS09220 ba17c450c34d903cd18e405084cc1f80 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 323 4.9E-116 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS09220 ba17c450c34d903cd18e405084cc1f80 327 PANTHER PTHR30349 1 319 6.2E-88 T 22-04-2016 RMET_RS09220 ba17c450c34d903cd18e405084cc1f80 327 SUPERFAMILY SSF53850 112 295 2.95E-15 T 22-04-2016 RMET_RS09220 ba17c450c34d903cd18e405084cc1f80 327 PANTHER PTHR30349:SF16 1 319 6.2E-88 T 22-04-2016 RMET_RS30785 1edd3835b38407710d7e52829461f50c 515 Pfam PF03308 ArgK protein 10 214 1.3E-42 T 22-04-2016 RMET_RS30785 1edd3835b38407710d7e52829461f50c 515 PANTHER PTHR23408 309 515 2.0E-46 T 22-04-2016 RMET_RS30785 1edd3835b38407710d7e52829461f50c 515 Gene3D G3DSA:3.20.20.240 374 515 5.0E-38 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RMET_RS30785 1edd3835b38407710d7e52829461f50c 515 Pfam PF01642 Methylmalonyl-CoA mutase 387 514 8.7E-25 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RMET_RS30785 1edd3835b38407710d7e52829461f50c 515 PANTHER PTHR23408:SF1 309 515 2.0E-46 T 22-04-2016 RMET_RS30785 1edd3835b38407710d7e52829461f50c 515 SUPERFAMILY SSF52540 2 247 9.98E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS30785 1edd3835b38407710d7e52829461f50c 515 SUPERFAMILY SSF51703 341 514 5.89E-31 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RMET_RS30785 1edd3835b38407710d7e52829461f50c 515 Gene3D G3DSA:3.40.50.300 41 220 1.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07465 c00fbb0e38b24ec1a93bae6991814941 115 Pfam PF11171 Protein of unknown function (DUF2958) 4 113 7.1E-44 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 RMET_RS03875 37050b89dd05bff33205fc9d89c17b3b 179 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 5 176 5.5E-70 T 22-04-2016 IPR017670 Phosphonate degradation operon associated HDIG domain protein RMET_RS03875 37050b89dd05bff33205fc9d89c17b3b 179 SUPERFAMILY SSF109604 30 96 4.25E-8 T 22-04-2016 RMET_RS03875 37050b89dd05bff33205fc9d89c17b3b 179 Pfam PF01966 HD domain 31 87 7.4E-5 T 22-04-2016 IPR006674 HD domain RMET_RS03875 37050b89dd05bff33205fc9d89c17b3b 179 PANTHER PTHR40202:SF1 9 177 3.7E-39 T 22-04-2016 RMET_RS03875 37050b89dd05bff33205fc9d89c17b3b 179 PANTHER PTHR40202 9 177 3.7E-39 T 22-04-2016 RMET_RS03875 37050b89dd05bff33205fc9d89c17b3b 179 Gene3D G3DSA:1.10.3210.10 40 99 2.8E-5 T 22-04-2016 IPR006674 HD domain RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 170 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 151 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 106 122 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 59 70 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PANTHER PTHR24319 15 232 1.0E-44 T 22-04-2016 RMET_RS03965 865a345fc5b063630f0f16552342915c 238 SUPERFAMILY SSF51735 13 233 7.4E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03965 865a345fc5b063630f0f16552342915c 238 Gene3D G3DSA:3.40.50.720 13 233 6.7E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PANTHER PTHR24319:SF23 15 232 1.0E-44 T 22-04-2016 RMET_RS03965 865a345fc5b063630f0f16552342915c 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 232 5.4E-37 T 22-04-2016 RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 59 70 6.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 120 6.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS03965 865a345fc5b063630f0f16552342915c 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 151 6.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS14700 9c54b7ea576836a53cf434c6cbeb108f 230 PANTHER PTHR30363:SF7 1 167 4.1E-45 T 22-04-2016 RMET_RS14700 9c54b7ea576836a53cf434c6cbeb108f 230 Gene3D G3DSA:1.10.10.10 4 63 4.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14700 9c54b7ea576836a53cf434c6cbeb108f 230 Pfam PF08279 HTH domain 7 60 4.1E-16 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 RMET_RS14700 9c54b7ea576836a53cf434c6cbeb108f 230 PANTHER PTHR30363 1 167 4.1E-45 T 22-04-2016 RMET_RS14700 9c54b7ea576836a53cf434c6cbeb108f 230 SUPERFAMILY SSF46785 5 62 4.54E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14700 9c54b7ea576836a53cf434c6cbeb108f 230 Pfam PF13280 WYL domain 137 222 2.6E-17 T 22-04-2016 IPR026881 WYL domain RMET_RS27935 900aba3c762872fa3c1c75b6aee5312e 163 PANTHER PTHR10422 1 162 2.4E-84 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS27935 900aba3c762872fa3c1c75b6aee5312e 163 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 1 140 1.0E-39 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS27935 900aba3c762872fa3c1c75b6aee5312e 163 Gene3D G3DSA:1.20.210.10 2 160 1.1E-28 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS27935 900aba3c762872fa3c1c75b6aee5312e 163 SUPERFAMILY SSF81442 2 161 2.88E-44 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RMET_RS27935 900aba3c762872fa3c1c75b6aee5312e 163 PANTHER PTHR10422:SF21 1 162 2.4E-84 T 22-04-2016 RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 SUPERFAMILY SSF52540 6 254 3.52E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 Pfam PF00005 ABC transporter 23 183 1.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 SMART SM00382 32 238 5.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 PANTHER PTHR24220 130 255 2.3E-110 T 22-04-2016 RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 PANTHER PTHR24220 9 114 2.3E-110 T 22-04-2016 RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 PANTHER PTHR24220:SF358 130 255 2.3E-110 T 22-04-2016 RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 PANTHER PTHR24220:SF358 9 114 2.3E-110 T 22-04-2016 RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 254 1.2E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS14360 228738c7eb53d9c7c235d912c34828b0 258 Gene3D G3DSA:3.40.50.300 4 254 1.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 SUPERFAMILY SSF63380 94 200 5.95E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 SUPERFAMILY SSF63380 1 94 4.68E-17 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 Pfam PF00677 Lumazine binding domain 3 88 5.1E-14 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 Pfam PF00677 Lumazine binding domain 101 189 2.0E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 PANTHER PTHR21098 1 205 3.0E-80 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 PIRSF PIRSF000498 1 208 5.5E-67 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 9.6E-51 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 Gene3D G3DSA:2.40.30.20 106 200 2.8E-31 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS13500 80461b8cf9a4af50eee7c0351b07d983 210 Gene3D G3DSA:2.40.30.20 5 105 4.8E-23 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RMET_RS02040 a039d210dfb90a27fc28de477e7e794a 276 Gene3D G3DSA:3.60.20.10 1 252 1.9E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS02040 a039d210dfb90a27fc28de477e7e794a 276 Pfam PF13230 Glutamine amidotransferases class-II 1 268 5.6E-127 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 RMET_RS02040 a039d210dfb90a27fc28de477e7e794a 276 PANTHER PTHR11907:SF10 1 264 3.3E-99 T 22-04-2016 RMET_RS02040 a039d210dfb90a27fc28de477e7e794a 276 PANTHER PTHR11907 1 264 3.3E-99 T 22-04-2016 RMET_RS02040 a039d210dfb90a27fc28de477e7e794a 276 SUPERFAMILY SSF56235 2 252 1.8E-44 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 SUPERFAMILY SSF53383 378 519 5.36E-47 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 SUPERFAMILY SSF53383 120 344 5.36E-47 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 Gene3D G3DSA:3.90.1150.10 383 520 1.8E-16 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 Gene3D G3DSA:3.40.640.10 124 344 2.9E-37 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 PANTHER PTHR11751 78 341 7.3E-140 T 22-04-2016 RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 PANTHER PTHR11751 376 525 7.3E-140 T 22-04-2016 RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 311 324 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 12 525 9.7E-240 T 22-04-2016 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 Pfam PF00155 Aminotransferase class I and II 190 507 2.3E-24 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 PANTHER PTHR11751:SF6 78 341 7.3E-140 T 22-04-2016 RMET_RS09940 ed5dc03598fdf878aaf20fde52c3f3a8 538 PANTHER PTHR11751:SF6 376 525 7.3E-140 T 22-04-2016 RMET_RS09070 65b147df4252173194a3bb67987bcc32 380 PANTHER PTHR21266 7 338 7.9E-49 T 22-04-2016 RMET_RS09070 65b147df4252173194a3bb67987bcc32 380 Gene3D G3DSA:2.102.10.10 45 155 2.0E-33 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS09070 65b147df4252173194a3bb67987bcc32 380 SUPERFAMILY SSF50022 25 156 1.26E-36 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS09070 65b147df4252173194a3bb67987bcc32 380 SUPERFAMILY SSF55961 144 365 1.51E-27 T 22-04-2016 RMET_RS09070 65b147df4252173194a3bb67987bcc32 380 Pfam PF00355 Rieske [2Fe-2S] domain 46 126 9.1E-21 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS05580 d39c7fa1416c852f240099c668d3e68f 122 Gene3D G3DSA:3.40.50.10600 1 120 2.4E-33 T 22-04-2016 IPR021866 SpoIIAA-like RMET_RS05580 d39c7fa1416c852f240099c668d3e68f 122 Pfam PF11964 SpoIIAA-like 12 120 8.9E-17 T 22-04-2016 IPR021866 SpoIIAA-like RMET_RS05580 d39c7fa1416c852f240099c668d3e68f 122 SUPERFAMILY SSF52091 1 120 8.24E-29 T 22-04-2016 IPR002645 STAS domain RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 444 1.1E-143 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 PANTHER PTHR11918 1 450 1.1E-192 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 447 4.6E-170 T 22-04-2016 RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 Pfam PF01938 TRAM domain 378 447 1.0E-14 T 22-04-2016 IPR002792 TRAM domain RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 5.1E-30 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 448 72.114 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 Gene3D G3DSA:3.80.30.20 145 379 2.6E-76 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 Pfam PF04055 Radical SAM superfamily 150 324 9.9E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 SUPERFAMILY SSF102114 128 372 7.32E-58 T 22-04-2016 RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 SMART SM00729 146 367 2.0E-52 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS02295 0bf1a94f3d145f291d4c2a3f207a4b66 450 PANTHER PTHR11918:SF43 1 450 1.1E-192 T 22-04-2016 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 PANTHER PTHR30478 4 371 4.0E-119 T 22-04-2016 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 370 1.7E-98 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 SMART SM00480 18 367 1.8E-113 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 SUPERFAMILY SSF55979 250 371 1.26E-36 T 22-04-2016 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 Gene3D G3DSA:3.10.150.10 254 371 4.5E-38 T 22-04-2016 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 PIRSF PIRSF000804 1 371 8.4E-113 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 370 8.8E-35 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 Gene3D G3DSA:3.10.150.10 5 119 1.0E-24 T 22-04-2016 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 248 3.8E-34 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 SUPERFAMILY SSF55979 128 249 2.04E-27 T 22-04-2016 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 Gene3D G3DSA:3.10.150.10 126 253 3.8E-38 T 22-04-2016 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 SUPERFAMILY SSF55979 5 117 3.04E-21 T 22-04-2016 RMET_RS00025 f6448991d00a2b407478f1efcc323765 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 119 6.6E-29 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 Gene3D G3DSA:3.40.50.720 2 249 4.0E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 3.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 Pfam PF00106 short chain dehydrogenase 7 196 4.4E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 194 0.0093 T 22-04-2016 RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PANTHER PTHR24322 10 142 3.0E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PANTHER PTHR24322 158 194 3.0E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PANTHER PTHR24322:SF356 10 142 3.0E-56 T 22-04-2016 RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PANTHER PTHR24322:SF356 158 194 3.0E-56 T 22-04-2016 RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.0E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 6.0E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.0E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.0E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.0E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02685 6dc125c317bc2575b556a85990e66819 252 SUPERFAMILY SSF51735 2 247 1.53E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 Gene3D G3DSA:2.40.50.140 578 689 3.2E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 PANTHER PTHR11946:SF86 4 641 2.4E-208 T 22-04-2016 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 SUPERFAMILY SSF52374 4 139 6.34E-93 T 22-04-2016 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 SUPERFAMILY SSF52374 174 390 6.34E-93 T 22-04-2016 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 Pfam PF01588 Putative tRNA binding domain 590 686 1.6E-22 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 1.4E-22 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 255 266 1.4E-22 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.4E-22 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.4E-22 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 294 309 1.4E-22 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 388 399 1.4E-22 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 SUPERFAMILY SSF50249 583 689 4.9E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 527 7.0E-162 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 551 39.16 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 Gene3D G3DSA:1.10.730.10 384 540 5.4E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 558 690 2.4E-41 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 Gene3D G3DSA:2.20.28.20 143 174 9.5E-18 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 SUPERFAMILY SSF57770 140 174 1.05E-11 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 PANTHER PTHR11946 4 641 2.4E-208 T 22-04-2016 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 Pfam PF09334 tRNA synthetases class I (M) 6 400 3.9E-144 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 SUPERFAMILY SSF47323 390 598 2.24E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 Gene3D G3DSA:3.40.50.620 181 383 7.2E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS13895 2e2b3f59d4f259abf3a5561acc29fcef 690 Gene3D G3DSA:3.40.50.620 5 142 7.2E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 SUPERFAMILY SSF53901 5 239 3.26E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 Pfam PF00108 Thiolase, N-terminal domain 5 189 6.0E-12 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 Pfam PF02803 Thiolase, C-terminal domain 276 367 1.9E-9 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 PIRSF PIRSF000429 1 395 1.3E-57 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 Gene3D G3DSA:3.40.47.10 210 229 6.6E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 Gene3D G3DSA:3.40.47.10 15 117 6.6E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 PANTHER PTHR18919:SF83 1 397 6.0E-155 T 22-04-2016 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 PANTHER PTHR18919 1 397 6.0E-155 T 22-04-2016 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 SUPERFAMILY SSF53901 260 395 7.85E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 Gene3D G3DSA:3.40.47.10 252 392 8.0E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12680 892caa479de7803494edc6dd86b3fd28 397 Gene3D G3DSA:3.40.47.10 155 190 8.0E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS11185 90de74dcea2ebec2b03f643175d84d18 403 SUPERFAMILY SSF52540 8 201 3.93E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11185 90de74dcea2ebec2b03f643175d84d18 403 Gene3D G3DSA:3.40.50.300 4 198 5.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13065 33177656f40614c4c0e46940ee40fc15 249 Pfam PF09339 IclR helix-turn-helix domain 7 55 6.3E-12 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS13065 33177656f40614c4c0e46940ee40fc15 249 Gene3D G3DSA:1.10.10.10 3 63 2.0E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13065 33177656f40614c4c0e46940ee40fc15 249 PANTHER PTHR30136 2 241 3.0E-44 T 22-04-2016 RMET_RS13065 33177656f40614c4c0e46940ee40fc15 249 SUPERFAMILY SSF55781 79 238 6.15E-31 T 22-04-2016 IPR029016 GAF domain-like RMET_RS13065 33177656f40614c4c0e46940ee40fc15 249 SMART SM00346 5 95 0.0048 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS13065 33177656f40614c4c0e46940ee40fc15 249 Gene3D G3DSA:3.30.450.40 79 239 3.9E-38 T 22-04-2016 IPR029016 GAF domain-like RMET_RS13065 33177656f40614c4c0e46940ee40fc15 249 Pfam PF01614 Bacterial transcriptional regulator 122 240 1.2E-23 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS13065 33177656f40614c4c0e46940ee40fc15 249 SUPERFAMILY SSF46785 5 72 2.26E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05875 3ae81af0438172820e8503dc97796ce7 144 SMART SM00422 20 90 5.9E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS05875 3ae81af0438172820e8503dc97796ce7 144 Pfam PF13411 MerR HTH family regulatory protein 20 88 1.6E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS05875 3ae81af0438172820e8503dc97796ce7 144 PANTHER PTHR30204:SF15 12 89 1.1E-26 T 22-04-2016 RMET_RS05875 3ae81af0438172820e8503dc97796ce7 144 Gene3D G3DSA:1.10.1660.10 17 88 2.4E-17 T 22-04-2016 RMET_RS05875 3ae81af0438172820e8503dc97796ce7 144 PANTHER PTHR30204 12 89 1.1E-26 T 22-04-2016 RMET_RS05875 3ae81af0438172820e8503dc97796ce7 144 SUPERFAMILY SSF46955 18 94 1.79E-17 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 Gene3D G3DSA:3.20.20.70 13 291 1.9E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 PANTHER PTHR12128:SF34 1 291 1.3E-80 T 22-04-2016 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 PIRSF PIRSF001365 8 294 1.4E-74 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 142 172 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 19 290 6.6E-65 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 47 64 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 137 154 4.4E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 44 65 4.4E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 80 98 4.4E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 112 128 4.4E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 PANTHER PTHR12128 1 291 1.3E-80 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 SUPERFAMILY SSF51569 11 290 9.0E-82 T 22-04-2016 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 11 292 42.534 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 SMART SM01130 11 294 2.4E-94 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS14840 f34cdbf70c67a23b6d609716b26fcf37 302 Pfam PF00701 Dihydrodipicolinate synthetase family 14 289 3.8E-65 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 PANTHER PTHR24567 10 235 1.9E-74 T 22-04-2016 RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 Pfam PF00027 Cyclic nucleotide-binding domain 44 126 4.8E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 SUPERFAMILY SSF51206 17 156 5.63E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 Pfam PF13545 Crp-like helix-turn-helix domain 162 235 9.6E-18 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 PANTHER PTHR24567:SF28 10 235 1.9E-74 T 22-04-2016 RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 SMART SM00419 181 229 1.5E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 SUPERFAMILY SSF46785 160 237 5.45E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 SMART SM00100 24 145 3.1E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 Gene3D G3DSA:2.60.120.10 14 164 7.8E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 203 2.2E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 203 218 2.2E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RMET_RS10195 673bbaf8d964da3c4d076c2b46bc60f6 241 Gene3D G3DSA:1.10.10.10 165 237 2.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00900 a61dc39d518fcd2b4e54d6426640c282 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 237 1.8E-14 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RMET_RS00900 a61dc39d518fcd2b4e54d6426640c282 340 Gene3D G3DSA:3.40.50.720 1 249 5.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00900 a61dc39d518fcd2b4e54d6426640c282 340 PANTHER PTHR12126 2 335 4.0E-54 T 22-04-2016 RMET_RS00900 a61dc39d518fcd2b4e54d6426640c282 340 PANTHER PTHR12126:SF1 2 335 4.0E-54 T 22-04-2016 RMET_RS00900 a61dc39d518fcd2b4e54d6426640c282 340 SUPERFAMILY SSF51735 1 279 1.59E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 PANTHER PTHR13779:SF7 1 425 3.2E-183 T 22-04-2016 RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 SUPERFAMILY SSF52540 2 215 2.16E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 PANTHER PTHR13779 1 425 3.2E-183 T 22-04-2016 RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 Gene3D G3DSA:3.40.50.300 2 140 2.8E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 SMART SM00382 36 152 2.5E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 Gene3D G3DSA:1.20.272.10 228 326 1.2E-42 T 22-04-2016 RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 SUPERFAMILY SSF48019 231 413 2.32E-72 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 40 146 5.2E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 Gene3D G3DSA:1.10.8.60 141 208 8.9E-8 T 22-04-2016 RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 Pfam PF16193 AAA C-terminal domain 171 246 1.9E-20 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 Pfam PF12002 MgsA AAA+ ATPase C terminal 247 413 6.9E-66 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal RMET_RS03495 ef8a5b437b84ab9f4437e5f9f27fa1bd 431 Gene3D G3DSA:1.10.3710.10 328 423 9.5E-34 T 22-04-2016 RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 SUPERFAMILY SSF46785 5 112 3.66E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 Gene3D G3DSA:3.40.190.10 177 264 2.7E-24 T 22-04-2016 RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 Gene3D G3DSA:3.40.190.10 93 176 8.0E-24 T 22-04-2016 RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 SUPERFAMILY SSF53850 90 299 2.64E-44 T 22-04-2016 RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 PANTHER PTHR30537 1 301 3.7E-109 T 22-04-2016 RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 Gene3D G3DSA:1.10.10.10 4 85 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.7E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 Pfam PF03466 LysR substrate binding domain 89 296 8.4E-44 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS01015 38014f5ca99552494c5fb1cad70b00e9 308 PANTHER PTHR30537:SF5 1 301 3.7E-109 T 22-04-2016 RMET_RS16160 1db3ff394afd7246f2a5cc7bdcfc8fa7 165 Pfam PF01863 Protein of unknown function DUF45 90 146 8.4E-12 T 22-04-2016 IPR002725 Protein of unknown function DUF45 RMET_RS16160 1db3ff394afd7246f2a5cc7bdcfc8fa7 165 PANTHER PTHR30399 1 160 4.6E-91 T 22-04-2016 RMET_RS16160 1db3ff394afd7246f2a5cc7bdcfc8fa7 165 PANTHER PTHR30399:SF4 1 160 4.6E-91 T 22-04-2016 RMET_RS07295 479ffb4f6e70751be29840b0be5e4a93 401 Gene3D G3DSA:3.40.50.2000 177 361 2.7E-7 T 22-04-2016 RMET_RS07295 479ffb4f6e70751be29840b0be5e4a93 401 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 20 396 35.971 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RMET_RS07295 479ffb4f6e70751be29840b0be5e4a93 401 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 22 392 1.0E-93 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RMET_RS07295 479ffb4f6e70751be29840b0be5e4a93 401 SUPERFAMILY SSF53756 23 393 6.8E-30 T 22-04-2016 RMET_RS07295 479ffb4f6e70751be29840b0be5e4a93 401 PANTHER PTHR30372 18 398 1.8E-94 T 22-04-2016 RMET_RS07295 479ffb4f6e70751be29840b0be5e4a93 401 PANTHER PTHR30372:SF0 18 398 1.8E-94 T 22-04-2016 RMET_RS07295 479ffb4f6e70751be29840b0be5e4a93 401 Pfam PF02684 Lipid-A-disaccharide synthetase 23 387 6.5E-92 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 SUPERFAMILY SSF55811 153 223 8.57E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 SUPERFAMILY SSF55811 18 68 8.57E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 SUPERFAMILY SSF55811 95 106 8.57E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 Gene3D G3DSA:3.60.15.10 290 506 2.9E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 SUPERFAMILY SSF56281 293 551 3.25E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 Pfam PF00753 Metallo-beta-lactamase superfamily 314 479 6.6E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 SMART SM00849 314 479 5.8E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 PANTHER PTHR23131 221 559 4.8E-57 T 22-04-2016 RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 Gene3D G3DSA:3.90.79.10 7 106 2.6E-16 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS08270 4e78f08938a37f17b410aeeb5e90be45 566 Gene3D G3DSA:3.90.79.10 153 233 2.6E-16 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 Gene3D G3DSA:1.10.1200.80 254 328 1.6E-25 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 PANTHER PTHR11082 2 322 5.4E-137 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 PANTHER PTHR11082:SF25 2 322 5.4E-137 T 22-04-2016 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 323 50.59 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 PIRSF PIRSF006621 1 329 3.1E-106 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 SUPERFAMILY SSF51395 10 321 1.06E-89 T 22-04-2016 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 Pfam PF01207 Dihydrouridine synthase (Dus) 14 321 9.2E-109 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 Gene3D G3DSA:3.20.20.70 7 246 3.3E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS02165 0fa7c79475d75013e21880c4d20ec402 354 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 321 5.1E-124 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RMET_RS10275 cc2736aa2794609cc24672db3b1761d6 293 PANTHER PTHR32243:SF13 4 292 6.0E-102 T 22-04-2016 RMET_RS10275 cc2736aa2794609cc24672db3b1761d6 293 Gene3D G3DSA:1.10.3720.10 61 290 2.1E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10275 cc2736aa2794609cc24672db3b1761d6 293 SUPERFAMILY SSF161098 55 281 1.57E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10275 cc2736aa2794609cc24672db3b1761d6 293 PANTHER PTHR32243 4 292 6.0E-102 T 22-04-2016 RMET_RS10275 cc2736aa2794609cc24672db3b1761d6 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 290 2.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 PANTHER PTHR24220:SF442 346 456 7.0E-192 T 22-04-2016 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 PANTHER PTHR24220:SF442 19 318 7.0E-192 T 22-04-2016 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 SMART SM00382 46 251 3.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 SMART SM00382 355 547 3.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 SUPERFAMILY SSF52540 18 273 7.35E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 SUPERFAMILY SSF52540 320 569 2.34E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 PANTHER PTHR24220 346 456 7.0E-192 T 22-04-2016 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 PANTHER PTHR24220 19 318 7.0E-192 T 22-04-2016 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 Gene3D G3DSA:3.40.50.300 318 571 8.7E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 Gene3D G3DSA:3.40.50.300 17 275 2.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 Pfam PF00005 ABC transporter 38 201 5.7E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 Pfam PF00005 ABC transporter 347 496 9.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 547 597 1.1E-10 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 284 5.3E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS07090 77e57b0fb593f96f307bf7a813497399 630 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 549 590 3.3E-9 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS00830 1b8a430bf958c5689d9651044124f400 410 Pfam PF01266 FAD dependent oxidoreductase 15 357 3.2E-31 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RMET_RS00830 1b8a430bf958c5689d9651044124f400 410 Gene3D G3DSA:3.30.9.10 164 324 1.1E-20 T 22-04-2016 RMET_RS00830 1b8a430bf958c5689d9651044124f400 410 SUPERFAMILY SSF51905 12 286 5.24E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS00830 1b8a430bf958c5689d9651044124f400 410 Gene3D G3DSA:3.50.50.60 12 109 1.1E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16420 f7e44f1b5e90dcf0ec51091e8c9fc46d 111 Gene3D G3DSA:3.30.920.10 4 110 6.4E-27 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RMET_RS16420 f7e44f1b5e90dcf0ec51091e8c9fc46d 111 Hamap MF_00142 Protein CyaY [cyaY]. 4 110 24.893 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RMET_RS16420 f7e44f1b5e90dcf0ec51091e8c9fc46d 111 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 6 109 5.6E-35 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RMET_RS16420 f7e44f1b5e90dcf0ec51091e8c9fc46d 111 SMART SM01219 4 111 6.7E-45 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RMET_RS16420 f7e44f1b5e90dcf0ec51091e8c9fc46d 111 ProSitePatterns PS01344 Frataxin family signature. 55 69 - T 22-04-2016 IPR020895 Frataxin conserved site RMET_RS16420 f7e44f1b5e90dcf0ec51091e8c9fc46d 111 PANTHER PTHR16821 1 105 2.0E-18 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RMET_RS16420 f7e44f1b5e90dcf0ec51091e8c9fc46d 111 SUPERFAMILY SSF55387 3 107 5.93E-31 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RMET_RS16420 f7e44f1b5e90dcf0ec51091e8c9fc46d 111 Pfam PF01491 Frataxin-like domain 4 106 1.6E-23 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RMET_RS06780 591fd6f58c9585b2557734b985da68be 245 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 5 243 6.3E-71 T 22-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ RMET_RS13225 f699e5d2ae45e4085d34c27edd2b9ece 299 SUPERFAMILY SSF53448 4 272 8.45E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS13225 f699e5d2ae45e4085d34c27edd2b9ece 299 Pfam PF00483 Nucleotidyl transferase 12 268 3.0E-26 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RMET_RS13225 f699e5d2ae45e4085d34c27edd2b9ece 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 268 3.4E-116 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RMET_RS13225 f699e5d2ae45e4085d34c27edd2b9ece 299 PANTHER PTHR22572 7 286 2.5E-103 T 22-04-2016 RMET_RS13225 f699e5d2ae45e4085d34c27edd2b9ece 299 Gene3D G3DSA:3.90.550.10 5 278 2.0E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS13225 f699e5d2ae45e4085d34c27edd2b9ece 299 PANTHER PTHR22572:SF14 7 286 2.5E-103 T 22-04-2016 RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 Gene3D G3DSA:3.30.1220.10 244 373 3.8E-15 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 SUPERFAMILY SSF52540 4 309 6.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 PANTHER PTHR13748 5 331 2.9E-199 T 22-04-2016 RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 PANTHER PTHR13748 347 387 2.9E-199 T 22-04-2016 RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 PANTHER PTHR13748:SF4 5 331 2.9E-199 T 22-04-2016 RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 PANTHER PTHR13748:SF4 347 387 2.9E-199 T 22-04-2016 RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 Gene3D G3DSA:3.40.50.300 5 231 1.4E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 SMART SM00833 258 373 7.1E-53 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 258 373 1.1E-28 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS05525 f2ae7a8192542491aa9c77cdfc79f6e5 397 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 211 2.5E-57 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS05300 538820917cff065b76757cff08b9ac81 96 SUPERFAMILY SSF54909 1 96 8.78E-29 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS05300 538820917cff065b76757cff08b9ac81 96 PANTHER PTHR41521 1 96 1.1E-18 T 22-04-2016 RMET_RS05300 538820917cff065b76757cff08b9ac81 96 Pfam PF07045 Domain of unknown function (DUF1330) 4 96 5.8E-35 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 RMET_RS05300 538820917cff065b76757cff08b9ac81 96 Gene3D G3DSA:3.30.70.900 1 96 1.9E-33 T 22-04-2016 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 SMART SM00904 182 307 2.6E-58 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 74 3.7E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 SUPERFAMILY SSF52374 15 177 1.38E-37 T 22-04-2016 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 Gene3D G3DSA:2.40.30.30 187 309 1.0E-39 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 SUPERFAMILY SSF82114 173 309 1.87E-42 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 PANTHER PTHR22749:SF0 1 308 2.3E-119 T 22-04-2016 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 306 8.2E-91 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 PIRSF PIRSF004491 2 312 3.0E-100 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 PANTHER PTHR22749 1 308 2.3E-119 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 Pfam PF06574 FAD synthetase 11 165 2.8E-55 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 Pfam PF01687 Riboflavin kinase 183 306 2.6E-36 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RMET_RS14455 3d048315fbbcd3ab6e8c35a7348cde76 327 Gene3D G3DSA:3.40.50.620 10 185 7.0E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS12025 791ff540e74684bf86741050e759a83b 458 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 448 2.5E-13 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 Gene3D G3DSA:3.50.50.60 141 266 1.1E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 Gene3D G3DSA:3.50.50.60 5 140 4.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 Gene3D G3DSA:3.50.50.60 267 326 4.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 318 9.8E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PANTHER PTHR22912 6 452 1.1E-70 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 SUPERFAMILY SSF55424 341 455 4.47E-22 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 SUPERFAMILY SSF51905 2 328 3.69E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.7E-15 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.7E-15 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 1.7E-15 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 266 1.7E-15 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 251 265 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 133 142 2.2E-36 T 22-04-2016 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 Gene3D G3DSA:3.30.390.30 344 453 1.4E-19 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS12025 791ff540e74684bf86741050e759a83b 458 PANTHER PTHR22912:SF176 6 452 1.1E-70 T 22-04-2016 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 Gene3D G3DSA:3.30.470.20 186 381 3.3E-70 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 PANTHER PTHR11609:SF7 1 373 2.1E-185 T 22-04-2016 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 1 383 48.905 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 Gene3D G3DSA:3.30.1490.20 109 185 3.9E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 Pfam PF02222 ATP-grasp domain 109 286 1.3E-50 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 SUPERFAMILY SSF56059 99 305 1.04E-54 T 22-04-2016 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 SUPERFAMILY SSF51246 311 382 9.57E-20 T 22-04-2016 IPR011054 Rudiment single hybrid motif RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 1 381 4.6E-170 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 PANTHER PTHR11609 1 373 2.1E-185 T 22-04-2016 RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 Gene3D G3DSA:3.40.50.20 1 106 8.5E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS09110 6d3dd8a89318a1b7bafcc9261e2ffaa1 385 SUPERFAMILY SSF52440 1 98 5.04E-26 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS02635 9aa44859c7e0e5ff6b474cae3d40b5a1 326 PANTHER PTHR30349 1 287 8.5E-89 T 22-04-2016 RMET_RS02635 9aa44859c7e0e5ff6b474cae3d40b5a1 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 321 7.5E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS02635 9aa44859c7e0e5ff6b474cae3d40b5a1 326 PANTHER PTHR30349:SF16 1 287 8.5E-89 T 22-04-2016 RMET_RS02635 9aa44859c7e0e5ff6b474cae3d40b5a1 326 PIRSF PIRSF017082 1 324 4.8E-80 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS02635 9aa44859c7e0e5ff6b474cae3d40b5a1 326 SUPERFAMILY SSF53850 115 283 1.03E-10 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.1E-6 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.1E-6 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 Gene3D G3DSA:3.40.50.880 2 186 1.4E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PANTHER PTHR11922 1 186 5.6E-98 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 Pfam PF00117 Glutamine amidotransferase class-I 4 185 4.0E-56 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 3.3E-13 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 3.3E-13 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 3.3E-13 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 2.8E-83 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.3E-34 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.3E-34 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.3E-34 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.3E-34 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.3E-34 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.3E-34 T 22-04-2016 RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 SUPERFAMILY SSF52317 1 187 1.57E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS15940 20c18145a1c2f35a66938d02b68db92b 189 PANTHER PTHR11922:SF7 1 186 5.6E-98 T 22-04-2016 RMET_RS04215 3223071150ed2575036351d1f1e1ada9 272 Gene3D G3DSA:3.90.226.10 1 236 5.6E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS04215 3223071150ed2575036351d1f1e1ada9 272 SUPERFAMILY SSF52096 1 256 2.05E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS04215 3223071150ed2575036351d1f1e1ada9 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 232 1.8E-43 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS04215 3223071150ed2575036351d1f1e1ada9 272 PANTHER PTHR11941 5 232 7.6E-64 T 22-04-2016 RMET_RS04215 3223071150ed2575036351d1f1e1ada9 272 PANTHER PTHR11941:SF85 5 232 7.6E-64 T 22-04-2016 RMET_RS14990 53f79333d5e91346d8d5445d6e984f5c 512 SUPERFAMILY SSF46689 127 211 8.36E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS14990 53f79333d5e91346d8d5445d6e984f5c 512 Gene3D G3DSA:1.10.10.60 127 206 8.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS14990 53f79333d5e91346d8d5445d6e984f5c 512 Pfam PF00665 Integrase core domain 346 461 7.1E-20 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS14990 53f79333d5e91346d8d5445d6e984f5c 512 Pfam PF13276 HTH-like domain 269 323 6.9E-17 T 22-04-2016 IPR025948 HTH-like domain RMET_RS14990 53f79333d5e91346d8d5445d6e984f5c 512 Gene3D G3DSA:3.30.420.10 340 501 7.7E-22 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS14990 53f79333d5e91346d8d5445d6e984f5c 512 PANTHER PTHR32552 242 505 6.0E-47 T 22-04-2016 RMET_RS14990 53f79333d5e91346d8d5445d6e984f5c 512 SUPERFAMILY SSF53098 340 503 1.42E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS04295 3b2e4bc45fd5275c3962437ecda6fd14 311 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 311 1.9E-71 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 RMET_RS04295 3b2e4bc45fd5275c3962437ecda6fd14 311 Pfam PF03755 YicC-like family, N-terminal region 2 165 1.2E-39 T 22-04-2016 IPR013527 YicC-like, N-terminal RMET_RS04295 3b2e4bc45fd5275c3962437ecda6fd14 311 Pfam PF08340 Domain of unknown function (DUF1732) 227 311 2.2E-32 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 RMET_RS04295 3b2e4bc45fd5275c3962437ecda6fd14 311 PANTHER PTHR30636 1 311 5.3E-82 T 22-04-2016 RMET_RS01155 7243429e8c7d0749ca6d28287e897dba 106 PANTHER PTHR11780:SF12 6 106 3.6E-29 T 22-04-2016 RMET_RS01155 7243429e8c7d0749ca6d28287e897dba 106 PANTHER PTHR11780 6 106 3.6E-29 T 22-04-2016 RMET_RS01155 7243429e8c7d0749ca6d28287e897dba 106 SUPERFAMILY SSF52833 5 103 2.46E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01155 7243429e8c7d0749ca6d28287e897dba 106 Gene3D G3DSA:3.40.30.10 5 105 3.2E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 SUPERFAMILY SSF90123 34 348 1.83E-64 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 Gene3D G3DSA:1.20.1560.10 35 358 4.9E-69 T 22-04-2016 RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 PANTHER PTHR24221:SF18 26 614 0.0 T 22-04-2016 RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 Pfam PF00005 ABC transporter 386 535 2.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 SUPERFAMILY SSF52540 361 605 7.38E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 Gene3D G3DSA:3.40.50.300 370 601 6.1E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 Pfam PF00664 ABC transporter transmembrane region 48 322 6.2E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 PANTHER PTHR24221 26 614 0.0 T 22-04-2016 RMET_RS01980 9c10b0c6874bb4c37bd6cf0a11a9ed5e 630 SMART SM00382 395 581 6.9E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01850 3fbbaf8ac5bf0e6402a942087740cd59 164 PANTHER PTHR11908 1 148 1.1E-49 T 22-04-2016 RMET_RS01850 3fbbaf8ac5bf0e6402a942087740cd59 164 Gene3D G3DSA:3.10.20.30 4 76 7.7E-31 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS01850 3fbbaf8ac5bf0e6402a942087740cd59 164 SUPERFAMILY SSF54292 3 79 2.62E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS01850 3fbbaf8ac5bf0e6402a942087740cd59 164 Pfam PF01799 [2Fe-2S] binding domain 75 147 4.6E-32 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS01850 3fbbaf8ac5bf0e6402a942087740cd59 164 Gene3D G3DSA:1.10.150.120 77 157 4.0E-36 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS01850 3fbbaf8ac5bf0e6402a942087740cd59 164 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS01850 3fbbaf8ac5bf0e6402a942087740cd59 164 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 58 1.1E-6 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS01850 3fbbaf8ac5bf0e6402a942087740cd59 164 SUPERFAMILY SSF47741 86 156 2.75E-33 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS03490 471fa3a9f68dc6eef7c8a9b7c47254db 249 PANTHER PTHR24220:SF474 3 239 8.5E-151 T 22-04-2016 RMET_RS03490 471fa3a9f68dc6eef7c8a9b7c47254db 249 Pfam PF00005 ABC transporter 19 165 3.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03490 471fa3a9f68dc6eef7c8a9b7c47254db 249 PIRSF PIRSF039085 1 241 1.7E-106 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RMET_RS03490 471fa3a9f68dc6eef7c8a9b7c47254db 249 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03490 471fa3a9f68dc6eef7c8a9b7c47254db 249 SUPERFAMILY SSF52540 1 235 2.03E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03490 471fa3a9f68dc6eef7c8a9b7c47254db 249 SMART SM00382 26 213 9.2E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03490 471fa3a9f68dc6eef7c8a9b7c47254db 249 PANTHER PTHR24220 3 239 8.5E-151 T 22-04-2016 RMET_RS03490 471fa3a9f68dc6eef7c8a9b7c47254db 249 Gene3D G3DSA:3.40.50.300 1 236 8.8E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03070 a1db21a8c73aedc27f6c6b3ea38d927e 310 SUPERFAMILY SSF51569 1 291 4.54E-71 T 22-04-2016 RMET_RS03070 a1db21a8c73aedc27f6c6b3ea38d927e 310 PANTHER PTHR10277 2 296 5.9E-175 T 22-04-2016 RMET_RS03070 a1db21a8c73aedc27f6c6b3ea38d927e 310 Gene3D G3DSA:3.20.20.70 5 291 3.1E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS03070 a1db21a8c73aedc27f6c6b3ea38d927e 310 PANTHER PTHR10277:SF40 2 296 5.9E-175 T 22-04-2016 RMET_RS03070 a1db21a8c73aedc27f6c6b3ea38d927e 310 Pfam PF00682 HMGL-like 7 280 2.1E-53 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RMET_RS03070 a1db21a8c73aedc27f6c6b3ea38d927e 310 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 22-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 RMET_RS14690 5615f3f64cab540a4cab1db6e6443aab 241 PANTHER PTHR30249:SF5 1 239 9.3E-94 T 22-04-2016 RMET_RS14690 5615f3f64cab540a4cab1db6e6443aab 241 Pfam PF04172 LrgB-like family 24 237 8.2E-80 T 22-04-2016 IPR007300 CidB/LrgB family RMET_RS14690 5615f3f64cab540a4cab1db6e6443aab 241 PANTHER PTHR30249 1 239 9.3E-94 T 22-04-2016 RMET_RS12195 503cce1c9b2d71d4cbd8d2dbe553f17f 359 PANTHER PTHR30100:SF1 1 341 3.3E-134 T 22-04-2016 RMET_RS12195 503cce1c9b2d71d4cbd8d2dbe553f17f 359 SUPERFAMILY SSF53659 3 333 6.58E-104 T 22-04-2016 RMET_RS12195 503cce1c9b2d71d4cbd8d2dbe553f17f 359 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 157.177 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RMET_RS12195 503cce1c9b2d71d4cbd8d2dbe553f17f 359 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 333 1.8E-114 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RMET_RS12195 503cce1c9b2d71d4cbd8d2dbe553f17f 359 PIRSF PIRSF002465 1 337 7.5E-129 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RMET_RS12195 503cce1c9b2d71d4cbd8d2dbe553f17f 359 PANTHER PTHR30100 1 341 3.3E-134 T 22-04-2016 RMET_RS12195 503cce1c9b2d71d4cbd8d2dbe553f17f 359 Pfam PF02504 Fatty acid synthesis protein 3 326 5.2E-109 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 RMET_RS12195 503cce1c9b2d71d4cbd8d2dbe553f17f 359 Gene3D G3DSA:3.40.718.10 2 332 9.9E-134 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 130 3.8E-21 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PRINTS PR01959 SuhB family inositol monophosphatase signature 146 156 3.8E-21 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PRINTS PR01959 SuhB family inositol monophosphatase signature 52 71 3.8E-21 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 Pfam PF00459 Inositol monophosphatase family 2 155 2.6E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PANTHER PTHR20854:SF4 2 156 6.1E-62 T 22-04-2016 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 Gene3D G3DSA:3.30.540.10 4 98 1.2E-39 T 22-04-2016 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 29 42 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 Gene3D G3DSA:3.40.190.80 99 156 3.9E-16 T 22-04-2016 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PRINTS PR00377 Inositol monophosphatase superfamily signature 78 101 2.2E-39 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PRINTS PR00377 Inositol monophosphatase superfamily signature 29 45 2.2E-39 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PRINTS PR00377 Inositol monophosphatase superfamily signature 125 146 2.2E-39 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PRINTS PR00377 Inositol monophosphatase superfamily signature 5 21 2.2E-39 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 PANTHER PTHR20854 2 156 6.1E-62 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RMET_RS23480 6da493ca3b36e0d142abb799bc20e2a4 156 SUPERFAMILY SSF56655 2 155 6.28E-51 T 22-04-2016 RMET_RS10545 32395809e94f8404bd007d30c9555bb5 430 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 27 409 5.3E-118 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RMET_RS10545 32395809e94f8404bd007d30c9555bb5 430 PIRSF PIRSF004640 13 420 1.0E-129 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RMET_RS10545 32395809e94f8404bd007d30c9555bb5 430 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 18 414 28.474 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RMET_RS10545 32395809e94f8404bd007d30c9555bb5 430 PANTHER PTHR30454 13 414 4.9E-142 T 22-04-2016 RMET_RS10545 32395809e94f8404bd007d30c9555bb5 430 Pfam PF04551 GcpE protein 31 410 1.7E-114 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 PANTHER PTHR11730:SF17 247 509 1.9E-178 T 22-04-2016 RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 PANTHER PTHR11730:SF17 52 228 1.9E-178 T 22-04-2016 RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 TIGRFAM TIGR00836 amt: ammonium transporter 80 508 4.7E-133 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 Pfam PF00909 Ammonium Transporter Family 82 508 4.6E-120 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 PANTHER PTHR11730 247 509 1.9E-178 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 PANTHER PTHR11730 52 228 1.9E-178 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 SUPERFAMILY SSF111352 77 489 8.37E-125 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 Gene3D G3DSA:1.10.3430.10 74 489 1.9E-139 T 22-04-2016 IPR029020 Ammonium/urea transporter RMET_RS01225 7c674f030e57346f1bf9f4982eef9c2a 510 ProSitePatterns PS01219 Ammonium transporters signature. 256 281 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RMET_RS06440 d9cbc85c88360b09c9803ef5c898a55b 83 PANTHER PTHR24220 1 72 1.3E-28 T 22-04-2016 RMET_RS06440 d9cbc85c88360b09c9803ef5c898a55b 83 PANTHER PTHR24220:SF0 1 72 1.3E-28 T 22-04-2016 RMET_RS06440 d9cbc85c88360b09c9803ef5c898a55b 83 Gene3D G3DSA:3.40.50.300 1 75 1.8E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06440 d9cbc85c88360b09c9803ef5c898a55b 83 SUPERFAMILY SSF52540 1 72 1.83E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.7E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 PANTHER PTHR30126:SF5 3 307 3.3E-88 T 22-04-2016 RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 PANTHER PTHR30126 3 307 3.3E-88 T 22-04-2016 RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 SUPERFAMILY SSF46785 2 109 1.31E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 Gene3D G3DSA:3.40.190.10 91 176 1.4E-17 T 22-04-2016 RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 SUPERFAMILY SSF53850 92 297 1.09E-42 T 22-04-2016 RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 Gene3D G3DSA:1.10.10.10 3 88 3.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 Gene3D G3DSA:3.40.190.10 177 260 9.6E-24 T 22-04-2016 RMET_RS07590 f1772f863f39e1fd90ded009f4ad88cf 307 Pfam PF03466 LysR substrate binding domain 90 293 6.6E-48 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS16370 0f5af03564d0cd870d1833220262a4c7 247 SUPERFAMILY SSF143422 3 126 1.2E-26 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RMET_RS16370 0f5af03564d0cd870d1833220262a4c7 247 PANTHER PTHR34322:SF1 2 234 1.4E-24 T 22-04-2016 RMET_RS16370 0f5af03564d0cd870d1833220262a4c7 247 SMART SM01321 9 124 4.4E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RMET_RS16370 0f5af03564d0cd870d1833220262a4c7 247 PANTHER PTHR34322 2 234 1.4E-24 T 22-04-2016 RMET_RS16370 0f5af03564d0cd870d1833220262a4c7 247 Pfam PF01797 Transposase IS200 like 17 123 5.4E-13 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RMET_RS16370 0f5af03564d0cd870d1833220262a4c7 247 Gene3D G3DSA:3.30.70.1290 21 125 5.4E-10 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 Pfam PF07729 FCD domain 93 218 7.4E-23 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 SMART SM00895 93 219 3.5E-22 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 SUPERFAMILY SSF48008 90 224 2.88E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 Gene3D G3DSA:1.20.120.530 88 224 5.1E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 SMART SM00345 12 71 5.9E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 SUPERFAMILY SSF46785 4 74 8.33E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 PANTHER PTHR11751 6 109 3.9E-20 T 22-04-2016 RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 Gene3D G3DSA:1.10.10.10 3 74 4.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08960 a872d02679021ee981ebfd5a8c244985 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 1.4E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS03370 6f8b4c7907181ab00d6b76e464f590c8 56 Pfam PF00301 Rubredoxin 6 51 9.5E-23 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RMET_RS03370 6f8b4c7907181ab00d6b76e464f590c8 56 SUPERFAMILY SSF57802 2 54 3.87E-23 T 22-04-2016 RMET_RS03370 6f8b4c7907181ab00d6b76e464f590c8 56 PIRSF PIRSF000071 1 56 5.8E-26 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 RMET_RS03370 6f8b4c7907181ab00d6b76e464f590c8 56 PRINTS PR00163 Rubredoxin signature 5 21 2.2E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RMET_RS03370 6f8b4c7907181ab00d6b76e464f590c8 56 PRINTS PR00163 Rubredoxin signature 35 51 2.2E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RMET_RS03370 6f8b4c7907181ab00d6b76e464f590c8 56 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RMET_RS03370 6f8b4c7907181ab00d6b76e464f590c8 56 Gene3D G3DSA:2.20.28.10 2 54 4.7E-26 T 22-04-2016 IPR004039 Rubredoxin-type fold RMET_RS06240 a4dcd0c6d721b37d86b52f493094f017 399 Pfam PF00589 Phage integrase family 207 371 9.5E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06240 a4dcd0c6d721b37d86b52f493094f017 399 Gene3D G3DSA:1.10.443.10 205 378 8.8E-26 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS06240 a4dcd0c6d721b37d86b52f493094f017 399 Gene3D G3DSA:1.10.150.130 99 193 2.0E-12 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS06240 a4dcd0c6d721b37d86b52f493094f017 399 Pfam PF13356 Domain of unknown function (DUF4102) 6 93 8.0E-16 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RMET_RS06240 a4dcd0c6d721b37d86b52f493094f017 399 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 150 4.5E-9 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS06240 a4dcd0c6d721b37d86b52f493094f017 399 PANTHER PTHR30629 1 284 1.8E-34 T 22-04-2016 RMET_RS06240 a4dcd0c6d721b37d86b52f493094f017 399 PANTHER PTHR30629:SF2 1 284 1.8E-34 T 22-04-2016 RMET_RS06240 a4dcd0c6d721b37d86b52f493094f017 399 SUPERFAMILY SSF56349 98 378 8.83E-52 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS04855 00693029149ce97a3efccfdb5a700dd1 131 Gene3D G3DSA:1.10.260.40 10 75 3.0E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS04855 00693029149ce97a3efccfdb5a700dd1 131 Pfam PF01381 Helix-turn-helix 18 67 4.1E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS04855 00693029149ce97a3efccfdb5a700dd1 131 SMART SM00530 15 70 2.2E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS04855 00693029149ce97a3efccfdb5a700dd1 131 SUPERFAMILY SSF47413 9 73 9.55E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 Gene3D G3DSA:1.10.1740.10 4 82 1.8E-18 T 22-04-2016 RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 PANTHER PTHR30173:SF6 4 162 3.8E-26 T 22-04-2016 RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 SUPERFAMILY SSF88659 101 161 6.73E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 Pfam PF08281 Sigma-70, region 4 103 156 1.4E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 Gene3D G3DSA:1.10.10.10 102 161 5.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 159 8.0E-16 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 Pfam PF04542 Sigma-70 region 2 12 81 3.7E-8 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 PANTHER PTHR30173 4 162 3.8E-26 T 22-04-2016 RMET_RS16450 5b2664d476b1ece1bf6f9aa4e3f74460 177 SUPERFAMILY SSF88946 4 89 2.0E-11 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS02465 e8172687ab91c281cbf563ab02e002b3 563 Gene3D G3DSA:1.25.40.10 376 529 1.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS02465 e8172687ab91c281cbf563ab02e002b3 563 Pfam PF01435 Peptidase family M48 154 320 1.2E-30 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RMET_RS02465 e8172687ab91c281cbf563ab02e002b3 563 Gene3D G3DSA:3.30.2010.10 118 210 5.0E-18 T 22-04-2016 RMET_RS02465 e8172687ab91c281cbf563ab02e002b3 563 SUPERFAMILY SSF48452 368 499 1.12E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS02465 e8172687ab91c281cbf563ab02e002b3 563 Pfam PF14559 Tetratricopeptide repeat 426 491 6.4E-6 T 22-04-2016 RMET_RS02465 e8172687ab91c281cbf563ab02e002b3 563 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 555 31.331 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 RMET_RS02465 e8172687ab91c281cbf563ab02e002b3 563 PANTHER PTHR22726 70 402 6.1E-74 T 22-04-2016 RMET_RS02465 e8172687ab91c281cbf563ab02e002b3 563 PANTHER PTHR22726:SF10 70 402 6.1E-74 T 22-04-2016 RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 182 2.9E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 PIRSF PIRSF005644 29 370 1.3E-124 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 SUPERFAMILY SSF56042 189 366 3.29E-48 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 PANTHER PTHR30303:SF0 29 370 7.5E-157 T 22-04-2016 RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 Gene3D G3DSA:3.30.1330.10 47 185 1.2E-27 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 PANTHER PTHR30303 29 370 7.5E-157 T 22-04-2016 RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 Gene3D G3DSA:3.90.650.10 193 347 1.3E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 SUPERFAMILY SSF55326 36 186 4.71E-35 T 22-04-2016 RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 33 370 1.1E-138 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE RMET_RS06455 39cc10f775746e7bbe9cbeca9b70995d 370 Pfam PF02769 AIR synthase related protein, C-terminal domain 195 347 4.7E-33 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 Gene3D G3DSA:3.40.50.300 344 576 2.0E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 Pfam PF00005 ABC transporter 361 513 1.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 15 585 1.7E-245 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 Gene3D G3DSA:1.20.1560.10 16 330 1.4E-70 T 22-04-2016 RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 SUPERFAMILY SSF52540 333 584 7.82E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 SUPERFAMILY SSF90123 13 330 8.24E-71 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 SMART SM00382 370 559 8.9E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 PANTHER PTHR24221 3 588 2.1E-216 T 22-04-2016 RMET_RS03800 1b0750eb418c98cc8f564638a9ff28b5 588 Pfam PF00664 ABC transporter transmembrane region 31 300 1.9E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 Gene3D G3DSA:3.40.190.10 95 179 2.1E-26 T 22-04-2016 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 Pfam PF03466 LysR substrate binding domain 92 293 3.2E-31 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 Gene3D G3DSA:3.40.190.10 180 262 9.4E-25 T 22-04-2016 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 PANTHER PTHR30537:SF26 1 294 6.7E-78 T 22-04-2016 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 SUPERFAMILY SSF53850 93 294 3.41E-33 T 22-04-2016 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 PANTHER PTHR30537 1 294 6.7E-78 T 22-04-2016 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.6E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 SUPERFAMILY SSF46785 3 83 1.76E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17630 7357a471379cf60cf26411ad62ef86d4 300 Gene3D G3DSA:1.10.10.10 7 85 2.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14835 1484d88afdcaab2d8367dd0475116f41 183 PANTHER PTHR22769 12 171 4.8E-16 T 22-04-2016 RMET_RS14835 1484d88afdcaab2d8367dd0475116f41 183 Gene3D G3DSA:3.90.79.10 9 155 8.4E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS14835 1484d88afdcaab2d8367dd0475116f41 183 SUPERFAMILY SSF55811 5 148 2.57E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS14835 1484d88afdcaab2d8367dd0475116f41 183 Pfam PF00293 NUDIX domain 11 123 5.6E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 Gene3D G3DSA:3.90.1150.10 466 602 3.0E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 SUPERFAMILY SSF46785 130 203 1.25E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 Pfam PF00155 Aminotransferase class I and II 276 594 4.0E-25 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 SMART SM00345 140 199 2.5E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 Gene3D G3DSA:1.10.10.10 129 200 4.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 SUPERFAMILY SSF53383 235 603 2.13E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 Gene3D G3DSA:3.40.640.10 278 465 1.1E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 PANTHER PTHR11751 225 597 4.1E-100 T 22-04-2016 RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 Pfam PF00392 Bacterial regulatory proteins, gntR family 136 199 4.5E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS04370 9b10996ba1e249ab099a3c3991413c8c 606 PANTHER PTHR11751:SF314 225 597 4.1E-100 T 22-04-2016 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 52.122 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 121 134 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 211 224 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 84 97 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 197 210 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 345 356 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 110 118 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 135 150 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 288 302 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PRINTS PR00415 Aconitase family signature 401 414 4.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 467 1.3E-188 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 SUPERFAMILY SSF53732 2 469 3.66E-150 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 Gene3D G3DSA:3.40.1060.10 168 282 1.3E-30 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PANTHER PTHR11670:SF38 1 309 1.6E-208 T 22-04-2016 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PANTHER PTHR11670:SF38 329 469 1.6E-208 T 22-04-2016 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 1.0E-135 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 Gene3D G3DSA:3.30.499.10 295 305 9.7E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 Gene3D G3DSA:3.30.499.10 337 470 9.7E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 Gene3D G3DSA:3.30.499.10 4 160 3.1E-20 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PANTHER PTHR11670 1 309 1.6E-208 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 PANTHER PTHR11670 329 469 1.6E-208 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01020 ac139e7e09a8a96388c332da28c5e035 472 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS00575 a6b4a842d5cc6a5373457857bc5bdc8e 309 SUPERFAMILY SSF53474 47 283 1.02E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00575 a6b4a842d5cc6a5373457857bc5bdc8e 309 Pfam PF00326 Prolyl oligopeptidase family 91 169 4.6E-11 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RMET_RS00575 a6b4a842d5cc6a5373457857bc5bdc8e 309 Gene3D G3DSA:3.40.50.1820 33 281 2.5E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 SUPERFAMILY SSF53901 271 393 2.88E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 Gene3D G3DSA:3.40.47.10 278 393 4.8E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 Gene3D G3DSA:3.40.47.10 144 194 4.8E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 1.8E-140 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 PANTHER PTHR18919 1 394 1.5E-198 T 22-04-2016 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 PANTHER PTHR18919:SF95 1 394 1.5E-198 T 22-04-2016 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 PIRSF PIRSF000429 1 394 8.2E-129 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 Pfam PF00108 Thiolase, N-terminal domain 5 263 4.2E-93 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 SUPERFAMILY SSF53901 4 271 1.76E-85 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 Pfam PF02803 Thiolase, C-terminal domain 271 393 3.9E-46 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 Gene3D G3DSA:3.40.47.10 195 276 1.5E-69 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS06865 81d8ff5f6195005b4c6a5a637babe3ea 394 Gene3D G3DSA:3.40.47.10 4 125 1.5E-69 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS07410 b8bb5eb0df158b1dda8ff83bc4aed90c 644 SUPERFAMILY SSF52540 172 233 2.56E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07410 b8bb5eb0df158b1dda8ff83bc4aed90c 644 SUPERFAMILY SSF52540 311 380 2.56E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07410 b8bb5eb0df158b1dda8ff83bc4aed90c 644 SUPERFAMILY SSF52540 8 111 2.56E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07410 b8bb5eb0df158b1dda8ff83bc4aed90c 644 PANTHER PTHR22674 203 441 2.0E-14 T 22-04-2016 RMET_RS07410 b8bb5eb0df158b1dda8ff83bc4aed90c 644 Pfam PF07693 KAP family P-loop domain 18 381 8.2E-46 T 22-04-2016 IPR011646 KAP family P-loop domain RMET_RS04290 d3dc5ed122a055afecb25bf613583b88 353 SMART SM00220 24 299 4.5E-31 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RMET_RS04290 d3dc5ed122a055afecb25bf613583b88 353 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 166 178 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RMET_RS04290 d3dc5ed122a055afecb25bf613583b88 353 Pfam PF00069 Protein kinase domain 24 289 1.3E-35 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RMET_RS04290 d3dc5ed122a055afecb25bf613583b88 353 Gene3D G3DSA:1.10.510.10 107 290 4.1E-39 T 22-04-2016 RMET_RS04290 d3dc5ed122a055afecb25bf613583b88 353 PANTHER PTHR24362 81 303 1.9E-53 T 22-04-2016 RMET_RS04290 d3dc5ed122a055afecb25bf613583b88 353 PANTHER PTHR24362 23 64 1.9E-53 T 22-04-2016 RMET_RS04290 d3dc5ed122a055afecb25bf613583b88 353 Gene3D G3DSA:3.30.200.20 19 106 3.3E-15 T 22-04-2016 RMET_RS04290 d3dc5ed122a055afecb25bf613583b88 353 SUPERFAMILY SSF56112 21 300 1.84E-54 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 Pfam PF00501 AMP-binding enzyme 40 459 1.0E-65 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 PANTHER PTHR24096:SF170 6 597 8.8E-130 T 22-04-2016 RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 22-04-2016 IPR020845 AMP-binding, conserved site RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 Gene3D G3DSA:3.30.300.30 454 552 7.0E-23 T 22-04-2016 RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 544 6.4E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 Gene3D G3DSA:3.40.50.980 34 211 7.8E-18 T 22-04-2016 RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 SUPERFAMILY SSF56801 33 557 2.35E-110 T 22-04-2016 RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 Gene3D G3DSA:2.30.38.10 375 453 4.5E-12 T 22-04-2016 RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 PANTHER PTHR24096 6 597 8.8E-130 T 22-04-2016 RMET_RS08735 c920c3eba195a0bcd422050c8c0d0cb5 617 Gene3D G3DSA:3.40.50.980 212 374 3.1E-30 T 22-04-2016 RMET_RS12030 cd472c2714b97270747a5912e4ae6458 107 Gene3D G3DSA:3.40.1260.10 9 106 1.3E-9 T 22-04-2016 IPR027396 DsrEFH-like RMET_RS12030 cd472c2714b97270747a5912e4ae6458 107 SUPERFAMILY SSF75169 11 106 3.06E-14 T 22-04-2016 IPR027396 DsrEFH-like RMET_RS05295 6b9a1253e5400d925b15a2b248884d6e 289 PANTHER PTHR21057 5 284 7.7E-159 T 22-04-2016 RMET_RS05295 6b9a1253e5400d925b15a2b248884d6e 289 SUPERFAMILY SSF51569 2 275 5.59E-101 T 22-04-2016 RMET_RS05295 6b9a1253e5400d925b15a2b248884d6e 289 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 52.413 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RMET_RS05295 6b9a1253e5400d925b15a2b248884d6e 289 Pfam PF00793 DAHP synthetase I family 8 273 1.4E-66 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RMET_RS05295 6b9a1253e5400d925b15a2b248884d6e 289 Gene3D G3DSA:3.20.20.70 11 276 1.2E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS05295 6b9a1253e5400d925b15a2b248884d6e 289 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 274 1.3E-120 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RMET_RS05295 6b9a1253e5400d925b15a2b248884d6e 289 PANTHER PTHR21057:SF2 5 284 7.7E-159 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 SMART SM00829 10 322 7.5E-49 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 SUPERFAMILY SSF51735 111 280 1.66E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 Gene3D G3DSA:3.40.50.720 145 262 6.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 PANTHER PTHR11695:SF31 15 324 3.2E-130 T 22-04-2016 RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 PANTHER PTHR11695 15 324 3.2E-130 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 Pfam PF00107 Zinc-binding dehydrogenase 151 273 4.1E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 SUPERFAMILY SSF50129 1 140 3.62E-37 T 22-04-2016 IPR011032 GroES-like RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 Gene3D G3DSA:3.90.180.10 1 144 1.2E-43 T 22-04-2016 IPR011032 GroES-like RMET_RS10610 71f99556f8aca78bda152158866e0d16 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 1.1E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RMET_RS12210 36277a5d61009cbff3513f34b60c3840 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 8 190 7.4E-45 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RMET_RS12210 36277a5d61009cbff3513f34b60c3840 199 Gene3D G3DSA:3.90.950.10 8 194 1.7E-52 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RMET_RS12210 36277a5d61009cbff3513f34b60c3840 199 PANTHER PTHR11746:SF102 131 193 3.5E-21 T 22-04-2016 RMET_RS12210 36277a5d61009cbff3513f34b60c3840 199 Hamap MF_00528 Septum formation protein Maf [maf]. 8 196 29.143 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RMET_RS12210 36277a5d61009cbff3513f34b60c3840 199 Pfam PF02545 Maf-like protein 9 191 1.3E-42 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RMET_RS12210 36277a5d61009cbff3513f34b60c3840 199 SUPERFAMILY SSF52972 7 190 9.81E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RMET_RS12210 36277a5d61009cbff3513f34b60c3840 199 PANTHER PTHR11746 131 193 3.5E-21 T 22-04-2016 RMET_RS12210 36277a5d61009cbff3513f34b60c3840 199 PIRSF PIRSF006305 2 195 3.1E-42 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RMET_RS12230 cfd0a092656a95f17381529a626e8466 219 Gene3D G3DSA:1.10.150.240 20 75 2.8E-8 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RMET_RS12230 cfd0a092656a95f17381529a626e8466 219 PANTHER PTHR18901:SF40 1 215 1.6E-49 T 22-04-2016 RMET_RS12230 cfd0a092656a95f17381529a626e8466 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 180 6.6E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS12230 cfd0a092656a95f17381529a626e8466 219 Gene3D G3DSA:3.40.50.1000 76 216 8.5E-40 T 22-04-2016 IPR023214 HAD-like domain RMET_RS12230 cfd0a092656a95f17381529a626e8466 219 PANTHER PTHR18901 1 215 1.6E-49 T 22-04-2016 RMET_RS12230 cfd0a092656a95f17381529a626e8466 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 184 1.3E-31 T 22-04-2016 IPR023214 HAD-like domain RMET_RS12230 cfd0a092656a95f17381529a626e8466 219 SUPERFAMILY SSF56784 5 215 2.4E-57 T 22-04-2016 IPR023214 HAD-like domain RMET_RS12230 cfd0a092656a95f17381529a626e8466 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 185 1.4E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS01185 961459abf8791894837d620219eae106 179 Pfam PF08534 Redoxin 39 165 1.2E-28 T 22-04-2016 IPR013740 Redoxin GO:0016491 RMET_RS01185 961459abf8791894837d620219eae106 179 PANTHER PTHR10681 40 172 8.4E-28 T 22-04-2016 RMET_RS01185 961459abf8791894837d620219eae106 179 SUPERFAMILY SSF52833 38 177 5.23E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01185 961459abf8791894837d620219eae106 179 PANTHER PTHR10681:SF107 40 172 8.4E-28 T 22-04-2016 RMET_RS01185 961459abf8791894837d620219eae106 179 Gene3D G3DSA:3.40.30.10 13 177 4.5E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 306 314 4.4E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 4.4E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 4.4E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 239 248 4.4E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 3.3E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 2.3E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 306 314 2.3E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 2.3E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 2.3E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 2.3E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 Gene3D G3DSA:3.40.50.80 207 341 8.9E-41 T 22-04-2016 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 Gene3D G3DSA:3.10.20.30 2 91 1.6E-27 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 SUPERFAMILY SSF63380 102 205 2.51E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PANTHER PTHR19370:SF68 33 339 1.2E-64 T 22-04-2016 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 SUPERFAMILY SSF54292 1 89 1.57E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 SUPERFAMILY SSF52343 207 340 3.54E-40 T 22-04-2016 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 Gene3D G3DSA:2.40.30.10 101 205 2.8E-31 T 22-04-2016 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 Pfam PF00175 Oxidoreductase NAD-binding domain 215 320 5.6E-21 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 Pfam PF00970 Oxidoreductase FAD-binding domain 105 203 2.4E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RMET_RS14345 ba34755f0fbc6c90f8dce1b51d5bcf64 351 PANTHER PTHR19370 33 339 1.2E-64 T 22-04-2016 RMET_RS04700 87742e293a7c39ac7388ce97a770df7e 354 PANTHER PTHR11432:SF3 4 354 2.9E-162 T 22-04-2016 RMET_RS04700 87742e293a7c39ac7388ce97a770df7e 354 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 230 243 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 RMET_RS04700 87742e293a7c39ac7388ce97a770df7e 354 PANTHER PTHR11432 4 354 2.9E-162 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RMET_RS04700 87742e293a7c39ac7388ce97a770df7e 354 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 18 349 24.706 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RMET_RS04700 87742e293a7c39ac7388ce97a770df7e 354 Pfam PF00146 NADH dehydrogenase 26 342 9.1E-126 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 397 1.8E-26 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 Gene3D G3DSA:2.40.110.10 124 232 7.6E-36 T 22-04-2016 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 221 6.3E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 Gene3D G3DSA:1.20.140.10 234 398 9.4E-35 T 22-04-2016 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 Gene3D G3DSA:1.10.540.10 1 119 1.0E-24 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 SUPERFAMILY SSF47203 233 400 1.61E-26 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 119 4.3E-20 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 PANTHER PTHR10909:SF229 368 400 1.1E-157 T 22-04-2016 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 PANTHER PTHR10909:SF229 1 349 1.1E-157 T 22-04-2016 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 SUPERFAMILY SSF56645 2 246 1.57E-75 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 PANTHER PTHR10909 368 400 1.1E-157 T 22-04-2016 RMET_RS04750 94ed42573599c39d4bf34992de7e3d02 400 PANTHER PTHR10909 1 349 1.1E-157 T 22-04-2016 RMET_RS04035 7d919c6c5a7dd3e820959c5679b2e111 470 SUPERFAMILY SSF141322 400 464 4.05E-11 T 22-04-2016 RMET_RS04035 7d919c6c5a7dd3e820959c5679b2e111 470 Gene3D G3DSA:3.90.226.10 204 228 7.8E-15 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS04035 7d919c6c5a7dd3e820959c5679b2e111 470 Gene3D G3DSA:3.90.226.10 49 149 7.8E-15 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS04035 7d919c6c5a7dd3e820959c5679b2e111 470 Gene3D G3DSA:2.40.50.140 409 463 3.0E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS04035 7d919c6c5a7dd3e820959c5679b2e111 470 PANTHER PTHR33507:SF1 3 468 2.4E-139 T 22-04-2016 RMET_RS04035 7d919c6c5a7dd3e820959c5679b2e111 470 Pfam PF01957 NfeD-like C-terminal, partner-binding 329 465 1.4E-33 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain RMET_RS04035 7d919c6c5a7dd3e820959c5679b2e111 470 SUPERFAMILY SSF52096 46 228 1.28E-24 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS04035 7d919c6c5a7dd3e820959c5679b2e111 470 PANTHER PTHR33507 3 468 2.4E-139 T 22-04-2016 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 353 1.1E-132 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 SUPERFAMILY SSF51726 1 358 1.74E-111 T 22-04-2016 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 353 5.6E-123 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 355 49.056 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 PANTHER PTHR21091:SF2 1 359 9.6E-139 T 22-04-2016 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 PANTHER PTHR21091 1 359 9.6E-139 T 22-04-2016 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 Gene3D G3DSA:3.20.20.210 3 358 3.8E-143 T 22-04-2016 RMET_RS17545 8a48622bd8a1868c100cb1ca8b4b2852 367 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 145 161 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS10320 73e1ec0a74a217c749da98cdceaaa0f7 154 SMART SM00450 27 137 5.3E-4 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS10320 73e1ec0a74a217c749da98cdceaaa0f7 154 Gene3D G3DSA:3.40.250.10 22 152 6.0E-35 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS10320 73e1ec0a74a217c749da98cdceaaa0f7 154 SUPERFAMILY SSF52821 19 151 1.21E-15 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS03780 0e1f57b1e5735a49c3e916af8d310979 282 PANTHER PTHR22778:SF21 2 263 1.3E-68 T 22-04-2016 RMET_RS03780 0e1f57b1e5735a49c3e916af8d310979 282 Gene3D G3DSA:3.40.250.10 101 229 1.1E-26 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS03780 0e1f57b1e5735a49c3e916af8d310979 282 PANTHER PTHR22778 2 263 1.3E-68 T 22-04-2016 RMET_RS03780 0e1f57b1e5735a49c3e916af8d310979 282 SMART SM00450 118 219 3.6E-8 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS03780 0e1f57b1e5735a49c3e916af8d310979 282 SUPERFAMILY SSF52821 96 233 2.47E-22 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS03780 0e1f57b1e5735a49c3e916af8d310979 282 Gene3D G3DSA:3.30.70.100 21 72 1.3E-4 T 22-04-2016 RMET_RS03780 0e1f57b1e5735a49c3e916af8d310979 282 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 257 37.074 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 RMET_RS14585 8094e90952a7b861e867f7a5a442d51a 163 SUPERFAMILY SSF55729 4 152 1.6E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS14585 8094e90952a7b861e867f7a5a442d51a 163 PANTHER PTHR10545 1 161 5.0E-68 T 22-04-2016 RMET_RS14585 8094e90952a7b861e867f7a5a442d51a 163 Gene3D G3DSA:3.40.630.30 1 161 2.8E-58 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS14585 8094e90952a7b861e867f7a5a442d51a 163 Pfam PF00583 Acetyltransferase (GNAT) family 67 141 2.4E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 SUPERFAMILY SSF100950 2 261 3.07E-69 T 22-04-2016 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 PANTHER PTHR13707:SF38 1 540 1.6E-162 T 22-04-2016 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 SMART SM00882 3 252 5.8E-49 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 SUPERFAMILY SSF100950 298 545 2.02E-62 T 22-04-2016 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 Gene3D G3DSA:3.40.1080.10 2 251 4.4E-55 T 22-04-2016 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 PANTHER PTHR13707 1 540 1.6E-162 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 PIRSF PIRSF000858 1 547 1.5E-191 T 22-04-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 Gene3D G3DSA:3.40.810.20 297 540 3.7E-51 T 22-04-2016 RMET_RS12990 8cde3d35bfa8806167ca8180a29a7052 547 Pfam PF01144 Coenzyme A transferase 5 251 4.1E-22 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 SUPERFAMILY SSF51735 1 273 5.14E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PANTHER PTHR24322:SF365 11 141 3.4E-61 T 22-04-2016 RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PANTHER PTHR24322:SF365 157 191 3.4E-61 T 22-04-2016 RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 7.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 Pfam PF00106 short chain dehydrogenase 7 200 9.8E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 6.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PANTHER PTHR24322 11 141 3.4E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 PANTHER PTHR24322 157 191 3.4E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 Gene3D G3DSA:3.40.50.720 6 247 1.5E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 195 9.0E-4 T 22-04-2016 RMET_RS18080 b38d73a2cec20787da56ce111e40c5f7 296 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 Gene3D G3DSA:1.20.140.10 224 386 6.7E-55 T 22-04-2016 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 PANTHER PTHR10909:SF305 44 386 2.3E-134 T 22-04-2016 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 SUPERFAMILY SSF56645 12 246 1.96E-64 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 Gene3D G3DSA:1.10.540.10 12 125 3.5E-18 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 Gene3D G3DSA:2.40.110.10 127 223 1.6E-35 T 22-04-2016 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 383 7.1E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 PANTHER PTHR10909 44 386 2.3E-134 T 22-04-2016 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 SUPERFAMILY SSF47203 233 385 5.64E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 124 1.3E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS11040 cb14de75a52a446ab744a5ad8e00f3d1 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 1.7E-23 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS04050 a75e2681eb2e4a94f64225b00d861486 62 Gene3D G3DSA:3.30.429.20 2 61 5.9E-24 T 22-04-2016 RMET_RS04050 a75e2681eb2e4a94f64225b00d861486 62 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 3.6E-18 T 22-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 RMET_RS04050 a75e2681eb2e4a94f64225b00d861486 62 SUPERFAMILY SSF55331 2 61 1.7E-18 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RMET_RS04050 a75e2681eb2e4a94f64225b00d861486 62 Pfam PF01361 Tautomerase enzyme 5 59 2.3E-13 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RMET_RS05990 b03fb3d13c00e14a3d3ec37e798e611d 87 Gene3D G3DSA:3.30.160.140 1 72 2.6E-15 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RMET_RS05990 b03fb3d13c00e14a3d3ec37e798e611d 87 SUPERFAMILY SSF160272 1 74 1.57E-15 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RMET_RS05990 b03fb3d13c00e14a3d3ec37e798e611d 87 Pfam PF07369 Protein of unknown function (DUF1488) 3 75 9.9E-18 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RMET_RS13625 f5ab0df20794bb95cf3fc1007546af65 269 Pfam PF03724 META domain 47 167 7.2E-21 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ RMET_RS13625 f5ab0df20794bb95cf3fc1007546af65 269 Pfam PF14302 Domain of unknown function (DUF4377) 191 263 5.8E-26 T 22-04-2016 IPR025485 Domain of unknown function DUF4377 RMET_RS09385 582bac13d6bc0c0b688e7018d2b13020 327 PANTHER PTHR33376 1 327 4.3E-54 T 22-04-2016 RMET_RS09385 582bac13d6bc0c0b688e7018d2b13020 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 37 309 9.5E-43 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RMET_RS16275 b3738d4b982ca4d22eddd00bbeb23573 207 PANTHER PTHR33508:SF1 1 207 1.2E-70 T 22-04-2016 RMET_RS16275 b3738d4b982ca4d22eddd00bbeb23573 207 PANTHER PTHR33508 1 207 1.2E-70 T 22-04-2016 RMET_RS16275 b3738d4b982ca4d22eddd00bbeb23573 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 198 9.2E-60 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RMET_RS16275 b3738d4b982ca4d22eddd00bbeb23573 207 Pfam PF01914 MarC family integral membrane protein 4 201 2.8E-59 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RMET_RS17755 f442d4465623ce499d635d12f0e3f6ad 100 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 24.556 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RMET_RS17755 f442d4465623ce499d635d12f0e3f6ad 100 Gene3D G3DSA:3.30.1360.20 2 95 3.2E-37 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RMET_RS17755 f442d4465623ce499d635d12f0e3f6ad 100 PANTHER PTHR12599 2 96 1.4E-55 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RMET_RS17755 f442d4465623ce499d635d12f0e3f6ad 100 PANTHER PTHR12599:SF7 2 96 1.4E-55 T 22-04-2016 RMET_RS17755 f442d4465623ce499d635d12f0e3f6ad 100 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 93 5.8E-32 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RMET_RS17755 f442d4465623ce499d635d12f0e3f6ad 100 SUPERFAMILY SSF55248 2 95 4.58E-35 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 Gene3D G3DSA:3.30.499.10 22 226 5.2E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 Gene3D G3DSA:3.30.499.10 360 546 1.4E-55 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 SUPERFAMILY SSF52016 599 857 4.71E-67 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 22-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 Gene3D G3DSA:3.20.19.10 605 857 5.2E-65 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PANTHER PTHR11670 720 861 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PANTHER PTHR11670 8 677 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 Pfam PF00694 Aconitase C-terminal domain 657 787 5.3E-29 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 SUPERFAMILY SSF53732 21 587 2.09E-186 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PANTHER PTHR11670:SF43 720 861 0.0 T 22-04-2016 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PANTHER PTHR11670:SF43 8 677 0.0 T 22-04-2016 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 Gene3D G3DSA:3.40.1060.10 227 359 2.3E-34 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 1.7E-148 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 402 413 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 205 220 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 281 294 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 162 170 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 191 204 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 138 151 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 267 280 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 464 477 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS07975 1ef41399961b6bdf95d81559ebe86f12 865 PRINTS PR00415 Aconitase family signature 360 374 5.4E-29 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS16850 ee84fd73fa09b7f092bb86d2e8103470 240 Gene3D G3DSA:3.40.50.1010 3 155 5.0E-16 T 22-04-2016 IPR029060 PIN domain-like RMET_RS16850 ee84fd73fa09b7f092bb86d2e8103470 240 Pfam PF01936 NYN domain 8 150 1.5E-15 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 Gene3D G3DSA:1.10.45.10 428 467 5.6E-17 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 Pfam PF01565 FAD binding domain 53 190 3.2E-40 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 Gene3D G3DSA:3.30.465.10 109 227 5.8E-49 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 467 4.9E-67 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 SUPERFAMILY SSF56176 15 227 5.14E-71 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 PANTHER PTHR11748:SF97 19 468 1.3E-236 T 22-04-2016 RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 Gene3D G3DSA:3.30.43.10 13 108 5.2E-29 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 PANTHER PTHR11748 19 468 1.3E-236 T 22-04-2016 RMET_RS14655 b75a8f9ddbabe5aee9396d3cb71d688c 472 SUPERFAMILY SSF55103 230 469 5.89E-77 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS16320 ec6296617c1af3f0a503b46a98f0b85d 98 SUPERFAMILY SSF52091 6 87 1.26E-13 T 22-04-2016 IPR002645 STAS domain RMET_RS16320 ec6296617c1af3f0a503b46a98f0b85d 98 Pfam PF13466 STAS domain 5 80 1.8E-19 T 22-04-2016 IPR002645 STAS domain RMET_RS16320 ec6296617c1af3f0a503b46a98f0b85d 98 Gene3D G3DSA:3.30.750.24 11 87 9.4E-12 T 22-04-2016 IPR002645 STAS domain RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 SUPERFAMILY SSF53850 89 293 7.24E-36 T 22-04-2016 RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 SUPERFAMILY SSF46785 1 84 1.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 Gene3D G3DSA:3.40.190.10 88 177 5.6E-25 T 22-04-2016 RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 PANTHER PTHR30346 1 300 3.9E-83 T 22-04-2016 RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 Gene3D G3DSA:1.10.10.10 1 86 3.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 Gene3D G3DSA:3.40.190.10 178 266 8.4E-22 T 22-04-2016 RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 Pfam PF03466 LysR substrate binding domain 87 289 2.0E-37 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09520 da526bfe8c008deea248aa966fee484b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 SUPERFAMILY SSF69065 3 154 1.26E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 Gene3D G3DSA:3.30.160.20 150 219 2.1E-23 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 29.242 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 Gene3D G3DSA:1.10.1520.10 3 145 7.2E-49 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 SMART SM00358 153 221 4.8E-15 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 Pfam PF14622 Ribonuclease-III-like 17 138 3.6E-36 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 PANTHER PTHR11207 3 218 5.2E-79 T 22-04-2016 RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 219 9.7E-72 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 SUPERFAMILY SSF54768 106 225 8.01E-25 T 22-04-2016 RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 Pfam PF00035 Double-stranded RNA binding motif 153 218 1.4E-10 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RMET_RS12130 bd5cd8e9c9775880ca98be5a21d58801 256 SMART SM00535 18 146 1.4E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RMET_RS16455 d58df24c33b977ffde6d47db6d523c3c 141 Pfam PF03640 Secreted repeat of unknown function 97 140 1.2E-21 T 22-04-2016 IPR005297 Lipoprotein repeat RMET_RS16455 d58df24c33b977ffde6d47db6d523c3c 141 Pfam PF03640 Secreted repeat of unknown function 42 84 1.1E-10 T 22-04-2016 IPR005297 Lipoprotein repeat RMET_RS16455 d58df24c33b977ffde6d47db6d523c3c 141 PIRSF PIRSF029720 4 141 6.1E-45 T 22-04-2016 IPR014558 Uncharacterised conserved lipoprotein RMET_RS16455 d58df24c33b977ffde6d47db6d523c3c 141 PANTHER PTHR39335 48 141 4.2E-37 T 22-04-2016 RMET_RS11885 750166bf23fe08b498bebce6c40a2437 125 PANTHER PTHR33930:SF2 1 119 3.5E-35 T 22-04-2016 RMET_RS11885 750166bf23fe08b498bebce6c40a2437 125 SUPERFAMILY SSF69118 5 110 3.8E-29 T 22-04-2016 IPR029032 AhpD-like RMET_RS11885 750166bf23fe08b498bebce6c40a2437 125 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 90 1.0E-14 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS11885 750166bf23fe08b498bebce6c40a2437 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 3.7E-22 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS11885 750166bf23fe08b498bebce6c40a2437 125 Gene3D G3DSA:1.20.1290.10 4 111 2.2E-34 T 22-04-2016 IPR029032 AhpD-like RMET_RS11885 750166bf23fe08b498bebce6c40a2437 125 PANTHER PTHR33930 1 119 3.5E-35 T 22-04-2016 RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 Gene3D G3DSA:1.20.1260.10 101 261 2.7E-8 T 22-04-2016 IPR012347 Ferritin-related RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 PANTHER PTHR30458:SF0 285 317 3.7E-100 T 22-04-2016 RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 PANTHER PTHR30458:SF0 355 474 3.7E-100 T 22-04-2016 RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 PANTHER PTHR30458:SF0 67 265 3.7E-100 T 22-04-2016 RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 TIGRFAM TIGR03225 benzo_boxB: benzoyl-CoA oxygenase, B subunit 3 473 1.3E-275 T 22-04-2016 IPR017635 Benzoyl-CoA oxygenase, B subunit KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 SUPERFAMILY SSF47240 106 362 1.35E-50 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 PANTHER PTHR30458 285 317 3.7E-100 T 22-04-2016 RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 PANTHER PTHR30458 355 474 3.7E-100 T 22-04-2016 RMET_RS06165 8f5d7e694ffc6c68a8c5cf348b7dea9d 474 PANTHER PTHR30458 67 265 3.7E-100 T 22-04-2016 RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 PRINTS PR00149 Fumarate lyase superfamily signature 254 281 8.1E-18 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 PRINTS PR00149 Fumarate lyase superfamily signature 165 183 8.1E-18 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 PRINTS PR00149 Fumarate lyase superfamily signature 297 313 8.1E-18 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 PRINTS PR00149 Fumarate lyase superfamily signature 119 137 8.1E-18 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 PANTHER PTHR11444 7 458 2.2E-266 T 22-04-2016 IPR000362 Fumarate lyase family RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 Pfam PF08328 Adenylosuccinate lyase C-terminal 334 448 1.3E-49 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 Pfam PF00206 Lyase 17 315 1.4E-57 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 15 457 1.1E-126 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 SUPERFAMILY SSF48557 6 451 1.48E-104 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 Gene3D G3DSA:1.20.200.10 122 391 1.1E-86 T 22-04-2016 RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 Gene3D G3DSA:1.10.40.30 392 448 2.2E-30 T 22-04-2016 RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 Gene3D G3DSA:1.10.275.10 5 121 1.1E-46 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 ProSitePatterns PS00163 Fumarate lyases signature. 297 306 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RMET_RS14820 d74a5de1dee8a2e9fbfd0e96df41e0d5 458 PANTHER PTHR11444:SF17 7 458 2.2E-266 T 22-04-2016 RMET_RS08675 7ccbc07840d0eeb0f28a68d88f874230 340 Gene3D G3DSA:1.10.10.60 283 331 7.4E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08675 7ccbc07840d0eeb0f28a68d88f874230 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 205 2.3E-42 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RMET_RS08675 7ccbc07840d0eeb0f28a68d88f874230 340 PANTHER PTHR11019:SF46 225 337 4.4E-22 T 22-04-2016 RMET_RS08675 7ccbc07840d0eeb0f28a68d88f874230 340 Pfam PF12833 Helix-turn-helix domain 253 330 9.3E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS08675 7ccbc07840d0eeb0f28a68d88f874230 340 SUPERFAMILY SSF46689 283 331 1.9E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS08675 7ccbc07840d0eeb0f28a68d88f874230 340 PANTHER PTHR11019 225 337 4.4E-22 T 22-04-2016 RMET_RS08675 7ccbc07840d0eeb0f28a68d88f874230 340 SMART SM00342 247 329 5.6E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS12840 b7241fb80412e4555830a6367e04bff0 133 Gene3D G3DSA:1.10.10.60 29 114 1.5E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS12840 b7241fb80412e4555830a6367e04bff0 133 Pfam PF01527 Transposase 20 99 1.9E-22 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RMET_RS12840 b7241fb80412e4555830a6367e04bff0 133 PANTHER PTHR37936 1 133 1.3E-37 T 22-04-2016 RMET_RS12840 b7241fb80412e4555830a6367e04bff0 133 SUPERFAMILY SSF48295 17 74 6.28E-16 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RMET_RS09975 b7241fb80412e4555830a6367e04bff0 133 Gene3D G3DSA:1.10.10.60 29 114 1.5E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS09975 b7241fb80412e4555830a6367e04bff0 133 Pfam PF01527 Transposase 20 99 1.9E-22 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RMET_RS09975 b7241fb80412e4555830a6367e04bff0 133 PANTHER PTHR37936 1 133 1.3E-37 T 22-04-2016 RMET_RS09975 b7241fb80412e4555830a6367e04bff0 133 SUPERFAMILY SSF48295 17 74 6.28E-16 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RMET_RS15695 8f02973d717dd19052a3a8d791bbe7c6 605 PANTHER PTHR30627 28 605 1.9E-211 T 22-04-2016 RMET_RS15695 8f02973d717dd19052a3a8d791bbe7c6 605 Gene3D G3DSA:3.40.710.10 258 576 1.6E-79 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS15695 8f02973d717dd19052a3a8d791bbe7c6 605 Pfam PF00905 Penicillin binding protein transpeptidase domain 277 570 7.8E-67 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RMET_RS15695 8f02973d717dd19052a3a8d791bbe7c6 605 SUPERFAMILY SSF56601 203 585 3.65E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS15695 8f02973d717dd19052a3a8d791bbe7c6 605 Pfam PF03717 Penicillin-binding Protein dimerisation domain 87 235 1.4E-20 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RMET_RS15695 8f02973d717dd19052a3a8d791bbe7c6 605 Gene3D G3DSA:3.90.1310.10 158 257 5.6E-29 T 22-04-2016 RMET_RS15695 8f02973d717dd19052a3a8d791bbe7c6 605 PANTHER PTHR30627:SF1 28 605 1.9E-211 T 22-04-2016 RMET_RS15695 8f02973d717dd19052a3a8d791bbe7c6 605 SUPERFAMILY SSF56519 83 250 9.16E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RMET_RS07305 d6b4df56017d0e0e540389c969f7be48 262 Pfam PF00588 SpoU rRNA Methylase family 116 251 1.8E-29 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RMET_RS07305 d6b4df56017d0e0e540389c969f7be48 262 SUPERFAMILY SSF75217 114 260 9.16E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RMET_RS07305 d6b4df56017d0e0e540389c969f7be48 262 Gene3D G3DSA:3.30.1330.30 3 103 6.8E-12 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RMET_RS07305 d6b4df56017d0e0e540389c969f7be48 262 PANTHER PTHR12029 24 262 1.6E-36 T 22-04-2016 RMET_RS07305 d6b4df56017d0e0e540389c969f7be48 262 Gene3D G3DSA:3.40.1280.10 115 259 1.4E-42 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMET_RS07305 d6b4df56017d0e0e540389c969f7be48 262 SUPERFAMILY SSF55315 2 103 2.59E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RMET_RS09895 12a2a3becfa723ab4e4f7be5ad2ab256 208 PANTHER PTHR37298 1 208 1.0E-55 T 22-04-2016 RMET_RS09895 12a2a3becfa723ab4e4f7be5ad2ab256 208 SUPERFAMILY SSF109755 41 201 1.83E-6 T 22-04-2016 RMET_RS09895 12a2a3becfa723ab4e4f7be5ad2ab256 208 Gene3D G3DSA:1.20.58.220 109 200 2.2E-4 T 22-04-2016 RMET_RS09895 12a2a3becfa723ab4e4f7be5ad2ab256 208 Pfam PF01865 Protein of unknown function DUF47 8 206 6.5E-34 T 22-04-2016 IPR018445 Putative phosphate transport regulator RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 Gene3D G3DSA:3.40.50.620 119 473 1.2E-108 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 Gene3D G3DSA:1.10.730.10 474 595 2.8E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 Gene3D G3DSA:3.30.1360.70 7 114 3.2E-31 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 PANTHER PTHR11956 2 595 1.2E-210 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 SUPERFAMILY SSF47323 464 595 1.18E-33 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 1.5E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 1.5E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 1.5E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 312 333 1.5E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 595 6.5E-122 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 Pfam PF00750 tRNA synthetases class I (R) 105 406 3.3E-20 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 Pfam PF05746 DALR anticodon binding domain 469 595 3.9E-33 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 SMART SM01016 7 95 4.7E-31 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 SUPERFAMILY SSF52374 120 479 1.04E-80 T 22-04-2016 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 SMART SM00836 469 595 9.5E-47 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 SUPERFAMILY SSF55190 7 115 4.71E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 595 25.074 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 PANTHER PTHR11956:SF6 2 595 1.2E-210 T 22-04-2016 RMET_RS00495 dab7f2767e7815c219188ebe759492fe 602 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 95 2.1E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RMET_RS02645 936e561761682d8f711f670e1ae7e012 297 PANTHER PTHR31752 118 295 1.2E-31 T 22-04-2016 RMET_RS02645 936e561761682d8f711f670e1ae7e012 297 PANTHER PTHR31752 63 75 1.2E-31 T 22-04-2016 RMET_RS02645 936e561761682d8f711f670e1ae7e012 297 PANTHER PTHR31752:SF13 118 295 1.2E-31 T 22-04-2016 RMET_RS02645 936e561761682d8f711f670e1ae7e012 297 PANTHER PTHR31752:SF13 63 75 1.2E-31 T 22-04-2016 RMET_RS02645 936e561761682d8f711f670e1ae7e012 297 Pfam PF03547 Membrane transport protein 151 293 7.6E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 Gene3D G3DSA:3.40.50.1240 1 247 1.7E-98 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 5.2E-117 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 SUPERFAMILY SSF53254 1 245 1.23E-79 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.519 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 SMART SM00855 3 189 8.2E-29 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 128 1.9E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 143 219 4.4E-5 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 PANTHER PTHR11931 1 248 6.5E-158 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RMET_RS01275 ebc5231a97ed57eadda64e0d7bd0620b 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 PANTHER PTHR11938 1 124 7.6E-90 T 22-04-2016 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 PANTHER PTHR11938 142 178 7.6E-90 T 22-04-2016 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 Gene3D G3DSA:3.30.70.20 64 119 3.3E-22 T 22-04-2016 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS13850 4810001db2139c81378a608be9422eb0 226 Pfam PF13247 4Fe-4S dicluster domain 53 164 2.0E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS13850 4810001db2139c81378a608be9422eb0 226 Gene3D G3DSA:3.30.70.20 120 175 1.0E-20 T 22-04-2016 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 Gene3D G3DSA:3.30.70.20 3 63 1.0E-20 T 22-04-2016 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 PRINTS PR00354 7Fe ferredoxin signature 66 76 9.9E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 PRINTS PR00354 7Fe ferredoxin signature 56 66 9.9E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 PRINTS PR00354 7Fe ferredoxin signature 83 100 9.9E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 PANTHER PTHR11938:SF96 1 124 7.6E-90 T 22-04-2016 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 PANTHER PTHR11938:SF96 142 178 7.6E-90 T 22-04-2016 RMET_RS13850 4810001db2139c81378a608be9422eb0 226 SUPERFAMILY SSF54862 1 181 2.3E-49 T 22-04-2016 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 PANTHER PTHR22573 1 460 2.3E-178 T 22-04-2016 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 3.2E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 217 3.2E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 3.2E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 3.2E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 SUPERFAMILY SSF53738 258 354 3.06E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 Gene3D G3DSA:3.40.120.10 6 161 5.3E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 PANTHER PTHR22573:SF28 1 460 2.3E-178 T 22-04-2016 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 Gene3D G3DSA:3.40.120.10 251 365 5.0E-43 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 SUPERFAMILY SSF53738 154 255 1.49E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 Gene3D G3DSA:3.40.120.10 172 249 2.6E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 Gene3D G3DSA:3.30.310.50 369 459 4.0E-27 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 141 3.2E-34 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 2.6E-20 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 SUPERFAMILY SSF53738 4 144 2.75E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 449 2.6E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 SUPERFAMILY SSF55957 367 461 7.85E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS13640 44b375ddb0aa63b47f9e11909b44c8c4 461 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 1.1E-25 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RMET_RS18990 1c2a7c0332ff302c8fbd1e06fa4a449d 153 PANTHER PTHR13734 6 140 4.6E-33 T 22-04-2016 RMET_RS18990 1c2a7c0332ff302c8fbd1e06fa4a449d 153 SUPERFAMILY SSF81891 28 142 7.19E-37 T 22-04-2016 RMET_RS18990 1c2a7c0332ff302c8fbd1e06fa4a449d 153 Gene3D G3DSA:1.10.3090.10 25 139 9.2E-36 T 22-04-2016 RMET_RS18990 1c2a7c0332ff302c8fbd1e06fa4a449d 153 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 54 115 2.4E-13 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RMET_RS04040 3d819b3cf59d799f7fc02519423b6696 414 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 31 396 3.0E-101 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB RMET_RS04040 3d819b3cf59d799f7fc02519423b6696 414 PANTHER PTHR23537:SF1 18 408 7.3E-49 T 22-04-2016 RMET_RS04040 3d819b3cf59d799f7fc02519423b6696 414 PANTHER PTHR23537 18 408 7.3E-49 T 22-04-2016 RMET_RS04040 3d819b3cf59d799f7fc02519423b6696 414 Gene3D G3DSA:1.20.1250.20 27 201 7.9E-8 T 22-04-2016 RMET_RS04040 3d819b3cf59d799f7fc02519423b6696 414 Gene3D G3DSA:1.20.1250.20 226 402 3.3E-10 T 22-04-2016 RMET_RS04040 3d819b3cf59d799f7fc02519423b6696 414 SUPERFAMILY SSF103473 21 401 2.62E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS04760 4ad3329c12dc8ef009930a1c315419fb 149 Pfam PF01575 MaoC like domain 19 108 8.0E-19 T 22-04-2016 IPR002539 MaoC-like domain RMET_RS04760 4ad3329c12dc8ef009930a1c315419fb 149 Gene3D G3DSA:3.10.129.10 2 148 7.0E-46 T 22-04-2016 IPR029069 HotDog domain RMET_RS04760 4ad3329c12dc8ef009930a1c315419fb 149 SUPERFAMILY SSF54637 2 148 1.26E-40 T 22-04-2016 IPR029069 HotDog domain RMET_RS04760 4ad3329c12dc8ef009930a1c315419fb 149 PANTHER PTHR13078 4 148 1.6E-37 T 22-04-2016 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 Gene3D G3DSA:3.40.430.10 2 160 3.1E-63 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 SUPERFAMILY SSF53597 4 160 3.37E-60 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 PRINTS PR00070 Dihydrofolate reductase signature 42 53 4.7E-17 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 PRINTS PR00070 Dihydrofolate reductase signature 29 37 4.7E-17 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 PRINTS PR00070 Dihydrofolate reductase signature 15 25 4.7E-17 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 PRINTS PR00070 Dihydrofolate reductase signature 93 107 4.7E-17 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 Pfam PF00186 Dihydrofolate reductase 4 160 1.8E-61 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 PIRSF PIRSF000194 1 163 4.7E-66 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 PANTHER PTHR22778:SF16 1 160 9.8E-52 T 22-04-2016 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RMET_RS12910 b9b24b16c5a9c327eeb2897bf3bcbfc6 166 PANTHER PTHR22778 1 160 9.8E-52 T 22-04-2016 RMET_RS02655 f0c9652db6ca834ca6136c23dd4212bf 177 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 142 2.6E-34 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RMET_RS02655 f0c9652db6ca834ca6136c23dd4212bf 177 PANTHER PTHR33540:SF2 5 143 9.6E-32 T 22-04-2016 RMET_RS02655 f0c9652db6ca834ca6136c23dd4212bf 177 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 140 1.1E-31 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RMET_RS02655 f0c9652db6ca834ca6136c23dd4212bf 177 Gene3D G3DSA:3.40.50.300 9 173 5.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02655 f0c9652db6ca834ca6136c23dd4212bf 177 PANTHER PTHR33540 5 143 9.6E-32 T 22-04-2016 RMET_RS02655 f0c9652db6ca834ca6136c23dd4212bf 177 SUPERFAMILY SSF52540 37 140 5.54E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00660 17145ff2527bd249f0969b0df69361d1 299 Gene3D G3DSA:3.40.50.1820 12 298 5.5E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00660 17145ff2527bd249f0969b0df69361d1 299 PANTHER PTHR10992:SF778 6 299 1.9E-63 T 22-04-2016 RMET_RS00660 17145ff2527bd249f0969b0df69361d1 299 PRINTS PR00412 Epoxide hydrolase signature 275 297 1.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS00660 17145ff2527bd249f0969b0df69361d1 299 PRINTS PR00412 Epoxide hydrolase signature 108 121 1.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS00660 17145ff2527bd249f0969b0df69361d1 299 PRINTS PR00412 Epoxide hydrolase signature 40 58 1.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS00660 17145ff2527bd249f0969b0df69361d1 299 PANTHER PTHR10992 6 299 1.9E-63 T 22-04-2016 RMET_RS00660 17145ff2527bd249f0969b0df69361d1 299 SUPERFAMILY SSF53474 10 299 1.34E-75 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00660 17145ff2527bd249f0969b0df69361d1 299 Pfam PF00561 alpha/beta hydrolase fold 34 143 5.3E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 Gene3D G3DSA:3.40.50.300 233 305 2.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 198 305 1.6E-43 T 22-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 85 284 2.4E-38 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 SUPERFAMILY SSF52540 201 334 1.28E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 SUPERFAMILY SSF52540 60 166 1.28E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 PANTHER PTHR30134:SF2 199 318 3.8E-111 T 22-04-2016 RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 PANTHER PTHR30134:SF2 20 164 3.8E-111 T 22-04-2016 RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 PANTHER PTHR30134 199 318 3.8E-111 T 22-04-2016 RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 PANTHER PTHR30134 20 164 3.8E-111 T 22-04-2016 RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 Gene3D G3DSA:3.40.50.300 198 232 2.5E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06475 0d344e94044ce2ef806c396ebefc2e04 345 Gene3D G3DSA:3.40.50.300 85 150 2.5E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 SUPERFAMILY SSF50249 19 160 6.0E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 Gene3D G3DSA:3.30.930.10 162 510 3.3E-114 T 22-04-2016 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 220 236 1.9E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 396 412 1.9E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 262 1.9E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 214 1.9E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 267 284 1.9E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 SUPERFAMILY SSF55681 167 512 1.34E-116 T 22-04-2016 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 Pfam PF01336 OB-fold nucleic acid binding domain 74 151 1.3E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 PANTHER PTHR22594:SF4 18 515 3.2E-260 T 22-04-2016 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 PANTHER PTHR22594 18 515 3.2E-260 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 27 514 43.964 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 Gene3D G3DSA:2.40.50.140 22 159 2.5E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 22 513 1.5E-201 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RMET_RS05200 52ca5baac04eb08f3ef0fe121e051750 515 Pfam PF00152 tRNA synthetases class II (D, K and N) 167 511 3.2E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 Gene3D G3DSA:2.40.50.100 48 81 4.4E-11 T 22-04-2016 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 Gene3D G3DSA:2.40.50.100 212 245 4.4E-11 T 22-04-2016 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 Pfam PF13533 Biotin-lipoyl like 49 93 6.2E-6 T 22-04-2016 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 Pfam PF13437 HlyD family secretion protein 215 320 3.0E-16 T 22-04-2016 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 PANTHER PTHR30438 11 355 5.1E-112 T 22-04-2016 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 59 79 8.26E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 328 343 8.26E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 SUPERFAMILY SSF111369 42 108 2.35E-6 T 22-04-2016 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 SUPERFAMILY SSF111369 179 299 1.83E-8 T 22-04-2016 RMET_RS08445 7f1044ac5c0c9ec27434d28d25140e0f 355 PANTHER PTHR30438:SF1 11 355 5.1E-112 T 22-04-2016 RMET_RS06620 c4af5639ecd9ac9016d44d71f0d2b25d 328 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 55 276 2.7E-74 T 22-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 RMET_RS06620 c4af5639ecd9ac9016d44d71f0d2b25d 328 Gene3D G3DSA:1.10.620.20 6 305 1.4E-100 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS06620 c4af5639ecd9ac9016d44d71f0d2b25d 328 PIRSF PIRSF000040 1 328 1.6E-114 T 22-04-2016 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 RMET_RS06620 c4af5639ecd9ac9016d44d71f0d2b25d 328 SUPERFAMILY SSF47240 3 327 2.03E-111 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 SUPERFAMILY SSF46589 15 100 1.36E-19 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 Gene3D G3DSA:3.30.930.10 11 342 5.0E-125 T 22-04-2016 RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 PANTHER PTHR11538 93 342 6.4E-91 T 22-04-2016 RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 6.0E-20 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 SUPERFAMILY SSF55681 93 342 9.24E-75 T 22-04-2016 RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 Pfam PF01409 tRNA synthetases class II core domain (F) 93 342 5.3E-95 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 PANTHER PTHR11538:SF40 93 342 6.4E-91 T 22-04-2016 RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 342 3.7E-98 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RMET_RS05860 69a9ab9bbcd3e5c39e50fc320b03c9c1 343 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 342 45.896 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 SUPERFAMILY SSF46785 4 88 4.49E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 Gene3D G3DSA:3.40.190.10 177 262 8.1E-25 T 22-04-2016 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 Gene3D G3DSA:1.10.10.10 3 88 5.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 SUPERFAMILY SSF53850 92 291 3.62E-44 T 22-04-2016 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 Pfam PF03466 LysR substrate binding domain 90 291 5.1E-52 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.0E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 PANTHER PTHR30126 2 287 3.1E-115 T 22-04-2016 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 Gene3D G3DSA:3.40.190.10 91 176 2.6E-15 T 22-04-2016 RMET_RS07565 4e63c55c2c82b84da16cfd6047ad4849 293 PANTHER PTHR30126:SF5 2 287 3.1E-115 T 22-04-2016 RMET_RS11030 cdc948e7f60108b08a3cf167c5b7d150 139 Pfam PF03061 Thioesterase superfamily 20 98 1.6E-9 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS11030 cdc948e7f60108b08a3cf167c5b7d150 139 Gene3D G3DSA:3.10.129.10 1 138 2.5E-41 T 22-04-2016 IPR029069 HotDog domain RMET_RS11030 cdc948e7f60108b08a3cf167c5b7d150 139 SUPERFAMILY SSF54637 2 136 1.59E-35 T 22-04-2016 IPR029069 HotDog domain RMET_RS11030 cdc948e7f60108b08a3cf167c5b7d150 139 PANTHER PTHR31793 1 139 5.2E-16 T 22-04-2016 RMET_RS01175 849e6273699f310399f591dfb8347d81 533 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 142 157 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 RMET_RS01175 849e6273699f310399f591dfb8347d81 533 Pfam PF00221 Aromatic amino acid lyase 14 494 5.6E-168 T 22-04-2016 IPR001106 Aromatic amino acid lyase RMET_RS01175 849e6273699f310399f591dfb8347d81 533 PANTHER PTHR10362 9 526 7.6E-181 T 22-04-2016 RMET_RS01175 849e6273699f310399f591dfb8347d81 533 Gene3D G3DSA:1.10.275.10 7 201 1.3E-66 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RMET_RS01175 849e6273699f310399f591dfb8347d81 533 PANTHER PTHR10362:SF7 9 526 7.6E-181 T 22-04-2016 RMET_RS01175 849e6273699f310399f591dfb8347d81 533 TIGRFAM TIGR03832 Tyr_2_3_mutase: tyrosine 2,3-aminomutase 9 516 3.2E-287 T 22-04-2016 IPR022314 Tyrosine 2,3-aminomutase, putative KEGG: 00350+5.4.3.6+4.3.1.23 RMET_RS01175 849e6273699f310399f591dfb8347d81 533 Gene3D G3DSA:1.20.200.10 202 526 2.2E-110 T 22-04-2016 RMET_RS01175 849e6273699f310399f591dfb8347d81 533 SUPERFAMILY SSF48557 8 525 6.75E-176 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RMET_RS08900 ab831e9d997ddaed1425182163e5ac84 576 Pfam PF02690 Na+/Pi-cotransporter 22 157 8.4E-44 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 RMET_RS08900 ab831e9d997ddaed1425182163e5ac84 576 Pfam PF02690 Na+/Pi-cotransporter 176 264 2.2E-19 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 RMET_RS08900 ab831e9d997ddaed1425182163e5ac84 576 PANTHER PTHR10010:SF26 1 454 2.6E-76 T 22-04-2016 RMET_RS08900 ab831e9d997ddaed1425182163e5ac84 576 PANTHER PTHR10010 1 454 2.6E-76 T 22-04-2016 RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 PANTHER PTHR24220:SF554 8 257 4.3E-125 T 22-04-2016 RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 SUPERFAMILY SSF52540 4 254 6.68E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 SMART SM00382 31 229 6.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 PANTHER PTHR24220 8 257 4.3E-125 T 22-04-2016 RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 Gene3D G3DSA:3.40.50.300 4 254 2.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 Pfam PF00005 ABC transporter 23 180 8.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 PIRSF PIRSF037116 1 258 1.9E-134 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 5 256 3.6E-113 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK RMET_RS03825 b24858f86c68c86d2d85b329f5c830b5 258 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 255 6.8E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS09340 9e9bff9878217cb619792f5dbac27a4b 135 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 6 129 38.579 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RMET_RS09340 9e9bff9878217cb619792f5dbac27a4b 135 PANTHER PTHR10173 5 130 1.9E-66 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RMET_RS09340 9e9bff9878217cb619792f5dbac27a4b 135 PANTHER PTHR10173:SF18 5 130 1.9E-66 T 22-04-2016 RMET_RS09340 9e9bff9878217cb619792f5dbac27a4b 135 Gene3D G3DSA:2.170.150.20 3 130 1.5E-65 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RMET_RS09340 9e9bff9878217cb619792f5dbac27a4b 135 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 130 2.1E-60 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RMET_RS09340 9e9bff9878217cb619792f5dbac27a4b 135 SUPERFAMILY SSF51316 4 130 3.35E-61 T 22-04-2016 IPR011057 Mss4-like RMET_RS09340 9e9bff9878217cb619792f5dbac27a4b 135 Pfam PF01641 SelR domain 9 127 4.5E-56 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 Pfam PF04552 Sigma-54, DNA binding domain 335 490 1.4E-67 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 Pfam PF04963 Sigma-54 factor, core binding domain 129 319 4.5E-58 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 PANTHER PTHR32248:SF4 1 492 2.4E-149 T 22-04-2016 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 PRINTS PR00045 Sigma-54 factor signature 392 404 9.8E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 PRINTS PR00045 Sigma-54 factor signature 466 484 9.8E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 PRINTS PR00045 Sigma-54 factor signature 204 221 9.8E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 PRINTS PR00045 Sigma-54 factor signature 408 419 9.8E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 PANTHER PTHR32248 1 492 2.4E-149 T 22-04-2016 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 380 399 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 471 478 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 8.3E-17 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 PIRSF PIRSF000774 1 492 9.6E-158 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01540 c581fc4328916ed32520c6e27d23a5b3 492 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 490 2.3E-144 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RMET_RS01010 e241101d336625cc67999570a7c14688 355 PANTHER PTHR11562:SF40 192 344 3.0E-141 T 22-04-2016 RMET_RS01010 e241101d336625cc67999570a7c14688 355 PANTHER PTHR11562:SF40 9 165 3.0E-141 T 22-04-2016 RMET_RS01010 e241101d336625cc67999570a7c14688 355 SUPERFAMILY SSF161111 191 259 4.45E-51 T 22-04-2016 RMET_RS01010 e241101d336625cc67999570a7c14688 355 SUPERFAMILY SSF161111 20 152 4.45E-51 T 22-04-2016 RMET_RS01010 e241101d336625cc67999570a7c14688 355 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 337 2.0E-65 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS01010 e241101d336625cc67999570a7c14688 355 Gene3D G3DSA:1.20.1510.10 191 258 4.9E-52 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RMET_RS01010 e241101d336625cc67999570a7c14688 355 Gene3D G3DSA:1.20.1510.10 24 152 4.9E-52 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RMET_RS01010 e241101d336625cc67999570a7c14688 355 Pfam PF01545 Cation efflux family 27 258 1.4E-40 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS01010 e241101d336625cc67999570a7c14688 355 PANTHER PTHR11562 192 344 3.0E-141 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS01010 e241101d336625cc67999570a7c14688 355 PANTHER PTHR11562 9 165 3.0E-141 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS31695 3f0dd4d1d4c0ed6eb7a00632de37d194 97 Pfam PF07043 Protein of unknown function (DUF1328) 49 87 2.1E-13 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 RMET_RS31695 3f0dd4d1d4c0ed6eb7a00632de37d194 97 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 44 93 19.237 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 432 6.8E-24 T 22-04-2016 IPR028154 AMP-dependent ligase, C-terminal RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 PIRSF PIRSF006444 3 434 4.9E-203 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 Pfam PF00501 AMP-binding enzyme 83 292 8.0E-18 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 14 432 1.6E-208 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 Gene3D G3DSA:3.40.50.980 88 255 5.1E-14 T 22-04-2016 RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 PANTHER PTHR24095 62 358 4.7E-179 T 22-04-2016 RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 Gene3D G3DSA:3.30.300.30 329 432 9.5E-35 T 22-04-2016 RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 SUPERFAMILY SSF56801 22 403 9.68E-66 T 22-04-2016 RMET_RS15870 676dbdb1fdba2fdcf465326cc2b047d4 434 PANTHER PTHR24095:SF175 62 358 4.7E-179 T 22-04-2016 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 Pfam PF12697 Alpha/beta hydrolase family 27 261 6.6E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 6.2E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 6.2E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 6.2E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 Gene3D G3DSA:3.40.50.1820 6 267 3.8E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 SUPERFAMILY SSF53474 4 266 1.21E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PRINTS PR00412 Epoxide hydrolase signature 108 121 2.5E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PRINTS PR00412 Epoxide hydrolase signature 244 266 2.5E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PRINTS PR00412 Epoxide hydrolase signature 94 107 2.5E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PRINTS PR00412 Epoxide hydrolase signature 212 228 2.5E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PRINTS PR00412 Epoxide hydrolase signature 50 65 2.5E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS05700 ebac031217b5112faf8adcd3604222c5 271 PANTHER PTHR10992 27 269 7.7E-42 T 22-04-2016 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 Gene3D G3DSA:2.30.30.30 1 62 1.3E-19 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 PIRSF PIRSF005901 1 186 5.6E-54 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 1.4E-17 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 SUPERFAMILY SSF50249 65 126 9.42E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 SMART SM01185 67 120 3.4E-21 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 PANTHER PTHR30053 1 186 4.3E-68 T 22-04-2016 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 SMART SM00841 128 184 1.2E-28 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 Pfam PF09285 Elongation factor P, C-terminal 129 184 4.1E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 SUPERFAMILY SSF50104 1 63 2.06E-15 T 22-04-2016 IPR008991 Translation protein SH3-like domain RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 9.7E-18 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 Gene3D G3DSA:2.40.50.140 65 126 2.9E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 Hamap MF_00141 Elongation factor P [efp]. 1 185 47.637 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 SUPERFAMILY SSF50249 128 185 6.68E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 Gene3D G3DSA:2.40.50.140 127 185 4.2E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 1.0E-62 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RMET_RS12100 4cabdf9dc0a98f4473375aba2d5a2c28 186 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 PANTHER PTHR30419 1 289 1.1E-94 T 22-04-2016 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 Pfam PF03466 LysR substrate binding domain 90 290 2.0E-41 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 Gene3D G3DSA:3.40.190.10 178 262 1.9E-23 T 22-04-2016 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 SUPERFAMILY SSF53850 91 291 1.09E-41 T 22-04-2016 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 Gene3D G3DSA:3.40.190.10 92 177 7.6E-17 T 22-04-2016 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 SUPERFAMILY SSF46785 3 111 3.95E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.0E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.18E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.18E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.18E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 Gene3D G3DSA:1.10.10.10 4 88 4.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02670 658d58a8c1df7a79b029aa6156dc066a 301 PANTHER PTHR30419:SF3 1 289 1.1E-94 T 22-04-2016 RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 208 2.5E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 PANTHER PTHR18901:SF21 10 220 2.1E-51 T 22-04-2016 RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 SUPERFAMILY SSF56784 11 218 5.8E-41 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 Gene3D G3DSA:3.40.50.1000 6 25 6.8E-36 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 Gene3D G3DSA:3.40.50.1000 110 219 6.8E-36 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 169 1.5E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 171 191 1.5E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 1.5E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 119 132 1.5E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 207 1.3E-21 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07630 09549f61ae5c286d9fbd6ea9ce8b4119 272 PANTHER PTHR18901 10 220 2.1E-51 T 22-04-2016 RMET_RS04160 01734ce2ba67d54be6223c791f3ff4c3 406 SUPERFAMILY SSF89796 1 406 1.31E-148 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS04160 01734ce2ba67d54be6223c791f3ff4c3 406 Pfam PF02515 CoA-transferase family III 4 382 2.9E-134 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS04160 01734ce2ba67d54be6223c791f3ff4c3 406 PANTHER PTHR24023:SF593 83 393 4.3E-38 T 22-04-2016 RMET_RS04160 01734ce2ba67d54be6223c791f3ff4c3 406 PANTHER PTHR24023 83 393 4.3E-38 T 22-04-2016 RMET_RS04160 01734ce2ba67d54be6223c791f3ff4c3 406 Gene3D G3DSA:3.30.1540.10 232 314 7.6E-37 T 22-04-2016 RMET_RS04160 01734ce2ba67d54be6223c791f3ff4c3 406 Gene3D G3DSA:3.40.50.10540 2 226 1.4E-121 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS04160 01734ce2ba67d54be6223c791f3ff4c3 406 Gene3D G3DSA:3.40.50.10540 315 406 1.4E-121 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 PANTHER PTHR11102 48 228 1.1E-41 T 22-04-2016 RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 SUPERFAMILY SSF81901 42 222 2.96E-39 T 22-04-2016 RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 Gene3D G3DSA:1.25.40.10 138 222 2.7E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 Gene3D G3DSA:1.25.40.10 45 137 1.6E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 SMART SM00671 141 176 1.3E-7 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 SMART SM00671 177 214 1.3E-5 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 SMART SM00671 69 104 5.5E-5 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 SMART SM00671 105 140 1.1E-5 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 Pfam PF08238 Sel1 repeat 112 140 4.1E-4 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 Pfam PF08238 Sel1 repeat 179 214 5.5E-7 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 Pfam PF08238 Sel1 repeat 142 176 2.9E-8 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS00230 6ca044e43f8f658f1ebd26fb760de3b8 236 Pfam PF08238 Sel1 repeat 71 102 2.4E-6 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS14915 1230d63b276b79799df405a803fec026 217 PANTHER PTHR37482:SF1 8 174 5.8E-27 T 22-04-2016 RMET_RS14915 1230d63b276b79799df405a803fec026 217 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 15 151 28.384 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE RMET_RS14915 1230d63b276b79799df405a803fec026 217 PANTHER PTHR37482 8 174 5.8E-27 T 22-04-2016 RMET_RS14915 1230d63b276b79799df405a803fec026 217 Pfam PF04355 SmpA / OmlA family 51 121 3.0E-26 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RMET_RS01390 c73c6063c6b23380973c4d69b4ee69e5 291 Pfam PF02678 Pirin 18 123 1.7E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain RMET_RS01390 c73c6063c6b23380973c4d69b4ee69e5 291 PANTHER PTHR13903 12 289 1.2E-116 T 22-04-2016 IPR012093 Pirin RMET_RS01390 c73c6063c6b23380973c4d69b4ee69e5 291 Gene3D G3DSA:2.60.120.10 9 245 1.2E-71 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS01390 c73c6063c6b23380973c4d69b4ee69e5 291 PIRSF PIRSF006232 1 283 6.8E-92 T 22-04-2016 IPR012093 Pirin RMET_RS01390 c73c6063c6b23380973c4d69b4ee69e5 291 SUPERFAMILY SSF51182 6 287 2.23E-82 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS01390 c73c6063c6b23380973c4d69b4ee69e5 291 PANTHER PTHR13903:SF4 12 289 1.2E-116 T 22-04-2016 RMET_RS01390 c73c6063c6b23380973c4d69b4ee69e5 291 Pfam PF05726 Pirin C-terminal cupin domain 176 274 5.0E-25 T 22-04-2016 IPR008778 Pirin, C-terminal domain RMET_RS16965 a9042e7f9e0a42f943fff07c96b171ed 219 PANTHER PTHR10204:SF42 27 199 4.5E-49 T 22-04-2016 RMET_RS16965 a9042e7f9e0a42f943fff07c96b171ed 219 Gene3D G3DSA:3.40.50.360 29 199 2.0E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS16965 a9042e7f9e0a42f943fff07c96b171ed 219 SUPERFAMILY SSF52218 29 199 2.3E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS16965 a9042e7f9e0a42f943fff07c96b171ed 219 PANTHER PTHR10204 27 199 4.5E-49 T 22-04-2016 RMET_RS16965 a9042e7f9e0a42f943fff07c96b171ed 219 Pfam PF02525 Flavodoxin-like fold 29 195 3.4E-41 T 22-04-2016 IPR003680 Flavodoxin-like fold RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Gene3D G3DSA:1.10.460.10 493 614 3.0E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Gene3D G3DSA:1.10.460.10 156 214 3.0E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 5.2E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 5.2E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 405 421 5.2E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 523 537 5.2E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 5.2E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Pfam PF01751 Toprim domain 5 131 4.9E-11 T 22-04-2016 IPR006171 Toprim domain RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 619 7.5E-175 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 SMART SM00436 126 221 7.6E-25 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PANTHER PTHR11390 523 612 5.4E-156 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PANTHER PTHR11390 1 506 5.4E-156 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Pfam PF01131 DNA topoisomerase 155 598 3.8E-119 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Gene3D G3DSA:3.40.50.140 4 151 2.7E-42 T 22-04-2016 IPR006171 Toprim domain RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 SMART SM00437 279 560 8.2E-76 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Gene3D G3DSA:2.70.20.10 370 489 5.5E-17 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Gene3D G3DSA:2.70.20.10 215 341 1.3E-24 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 SMART SM00493 3 126 6.5E-13 T 22-04-2016 IPR006171 Toprim domain RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PANTHER PTHR11390:SF21 523 612 5.4E-156 T 22-04-2016 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 PANTHER PTHR11390:SF21 1 506 5.4E-156 T 22-04-2016 RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 SUPERFAMILY SSF56712 3 613 5.49E-175 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Pfam PF13342 C-terminal repeat of topoisomerase 650 712 2.1E-20 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RMET_RS17930 2295cc712e564ac0d9d034a7d8723cd7 891 Pfam PF13342 C-terminal repeat of topoisomerase 759 819 1.8E-19 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RMET_RS09885 f5f0028a2a262221e879cdcea8ebf204 212 Gene3D G3DSA:3.90.1720.10 55 176 5.9E-43 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RMET_RS09885 f5f0028a2a262221e879cdcea8ebf204 212 Pfam PF00877 NlpC/P60 family 67 174 7.2E-28 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RMET_RS09885 f5f0028a2a262221e879cdcea8ebf204 212 PANTHER PTHR21666 61 176 1.4E-37 T 22-04-2016 RMET_RS09885 f5f0028a2a262221e879cdcea8ebf204 212 SUPERFAMILY SSF54001 51 176 1.77E-40 T 22-04-2016 RMET_RS01315 eddaca1ee2866514d6b02ea0a059bf3b 279 PANTHER PTHR11907:SF9 59 279 3.5E-44 T 22-04-2016 RMET_RS01315 eddaca1ee2866514d6b02ea0a059bf3b 279 Pfam PF00156 Phosphoribosyl transferase domain 185 270 1.4E-6 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RMET_RS01315 eddaca1ee2866514d6b02ea0a059bf3b 279 PANTHER PTHR11907 59 279 3.5E-44 T 22-04-2016 RMET_RS01315 eddaca1ee2866514d6b02ea0a059bf3b 279 SUPERFAMILY SSF53271 115 273 4.33E-29 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS01315 eddaca1ee2866514d6b02ea0a059bf3b 279 Gene3D G3DSA:3.40.50.2020 120 273 1.5E-27 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS05265 8bb9e56fc26ff116d1d72781b322ae3a 491 PANTHER PTHR34595 28 491 6.7E-296 T 22-04-2016 RMET_RS05265 8bb9e56fc26ff116d1d72781b322ae3a 491 PANTHER PTHR34595 3 11 6.7E-296 T 22-04-2016 RMET_RS05265 8bb9e56fc26ff116d1d72781b322ae3a 491 PIRSF PIRSF005522 1 491 2.1E-236 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 RMET_RS05265 8bb9e56fc26ff116d1d72781b322ae3a 491 Pfam PF14403 Circularly permuted ATP-grasp type 2 92 467 2.1E-165 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 RMET_RS05265 8bb9e56fc26ff116d1d72781b322ae3a 491 PANTHER PTHR34595:SF3 28 491 6.7E-296 T 22-04-2016 RMET_RS05265 8bb9e56fc26ff116d1d72781b322ae3a 491 PANTHER PTHR34595:SF3 3 11 6.7E-296 T 22-04-2016 RMET_RS05265 8bb9e56fc26ff116d1d72781b322ae3a 491 SUPERFAMILY SSF56059 31 230 1.71E-67 T 22-04-2016 RMET_RS05265 8bb9e56fc26ff116d1d72781b322ae3a 491 SUPERFAMILY SSF56059 337 482 1.71E-67 T 22-04-2016 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 SUPERFAMILY SSF88659 125 187 6.54E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 SUPERFAMILY SSF88946 3 110 1.54E-33 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 PANTHER PTHR30173:SF1 1 195 1.5E-52 T 22-04-2016 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 191 8.0E-98 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 Pfam PF08281 Sigma-70, region 4 134 182 3.9E-19 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 Pfam PF04542 Sigma-70 region 2 25 92 6.5E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 Gene3D G3DSA:1.10.10.10 127 189 2.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 Gene3D G3DSA:1.10.1740.10 3 113 3.3E-39 T 22-04-2016 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 7.2E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS12165 e415b55d52f6146b1876bdf02fc6619f 199 PANTHER PTHR30173 1 195 1.5E-52 T 22-04-2016 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 Gene3D G3DSA:3.40.47.10 7 130 3.0E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 Gene3D G3DSA:3.40.47.10 191 282 3.0E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 Pfam PF02803 Thiolase, C-terminal domain 278 398 3.0E-43 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 Pfam PF00108 Thiolase, N-terminal domain 9 268 2.1E-72 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 PANTHER PTHR18919 5 399 3.5E-165 T 22-04-2016 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 SUPERFAMILY SSF53901 278 398 1.4E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 1.4E-140 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 Gene3D G3DSA:3.40.47.10 283 398 2.4E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 Gene3D G3DSA:3.40.47.10 151 190 2.4E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 SUPERFAMILY SSF53901 3 273 1.52E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RMET_RS01960 5841689e5fa4ff8ce0d25ad8d78895d3 399 PIRSF PIRSF000429 2 399 7.6E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 Pfam PF01817 Chorismate mutase type II 40 117 7.7E-24 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 SMART SM00830 40 119 6.5E-33 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 Gene3D G3DSA:3.30.70.260 300 385 2.5E-28 T 22-04-2016 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 Gene3D G3DSA:3.40.190.10 118 204 1.5E-33 T 22-04-2016 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 PANTHER PTHR21022:SF0 36 387 1.2E-125 T 22-04-2016 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 SUPERFAMILY SSF48600 35 120 1.17E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 PIRSF PIRSF001500 29 387 1.6E-144 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 SUPERFAMILY SSF53850 120 303 1.3E-59 T 22-04-2016 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 Gene3D G3DSA:3.40.190.10 205 283 3.2E-26 T 22-04-2016 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 Gene3D G3DSA:1.20.59.10 28 117 2.8E-25 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 TIGRFAM TIGR01807 CM_P2: chorismate mutase 36 109 6.8E-28 T 22-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 PANTHER PTHR21022 36 387 1.2E-125 T 22-04-2016 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 Pfam PF00800 Prephenate dehydratase 121 296 3.2E-64 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RMET_RS03600 25f9e8eb33ee74dad040efdd24459a7a 387 SUPERFAMILY SSF55021 290 385 1.57E-26 T 22-04-2016 RMET_RS03840 7e4e669960b6ddfd2a372992ab3f9dd2 205 PIRSF PIRSF020680 9 205 3.9E-66 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 RMET_RS03840 7e4e669960b6ddfd2a372992ab3f9dd2 205 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 17 204 6.7E-64 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 RMET_RS03840 7e4e669960b6ddfd2a372992ab3f9dd2 205 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 18 202 7.9E-57 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 RMET_RS03840 7e4e669960b6ddfd2a372992ab3f9dd2 205 SUPERFAMILY SSF159709 25 204 5.75E-57 T 22-04-2016 RMET_RS01810 c9b559e32519dc18a683609a658daa02 464 PANTHER PTHR10788:SF6 3 462 4.6E-170 T 22-04-2016 RMET_RS01810 c9b559e32519dc18a683609a658daa02 464 PANTHER PTHR10788 3 462 4.6E-170 T 22-04-2016 RMET_RS01810 c9b559e32519dc18a683609a658daa02 464 Gene3D G3DSA:3.40.50.2000 246 443 5.0E-77 T 22-04-2016 RMET_RS01810 c9b559e32519dc18a683609a658daa02 464 Pfam PF00982 Glycosyltransferase family 20 17 458 1.0E-130 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 RMET_RS01810 c9b559e32519dc18a683609a658daa02 464 SUPERFAMILY SSF53756 3 459 3.87E-149 T 22-04-2016 RMET_RS01810 c9b559e32519dc18a683609a658daa02 464 Gene3D G3DSA:3.40.50.2000 2 245 2.7E-66 T 22-04-2016 RMET_RS01810 c9b559e32519dc18a683609a658daa02 464 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 459 6.0E-171 T 22-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 SUPERFAMILY SSF82866 302 505 9.55E-35 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 Pfam PF00873 AcrB/AcrD/AcrF family 10 1019 1.4E-166 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 PANTHER PTHR32063:SF18 5 1028 0.0 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 SUPERFAMILY SSF82693 45 140 4.71E-19 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 Gene3D G3DSA:3.30.2090.10 719 805 1.5E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 Gene3D G3DSA:3.30.2090.10 190 272 1.6E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 Gene3D G3DSA:3.30.70.1430 571 661 9.0E-4 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 SUPERFAMILY SSF82693 275 330 1.44E-18 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 SUPERFAMILY SSF82693 141 187 1.44E-18 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 SUPERFAMILY SSF82866 804 1025 3.66E-45 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 SUPERFAMILY SSF82714 190 271 6.67E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 PANTHER PTHR32063 5 1028 0.0 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 3.2E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 3.2E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 3.2E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 3.2E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 PRINTS PR00702 Acriflavin resistance protein family signature 372 393 3.2E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 3.2E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 Gene3D G3DSA:3.30.70.1430 45 143 9.2E-22 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 SUPERFAMILY SSF82714 720 804 1.16E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 Gene3D G3DSA:1.10.3850.10 281 507 1.7E-41 T 22-04-2016 RMET_RS09735 5ef7baaf87b335539d83972f37c16738 1036 Gene3D G3DSA:1.10.3850.10 812 1023 2.4E-49 T 22-04-2016 RMET_RS12470 db5d36613f600e552edfd2919af855cf 121 SUPERFAMILY SSF81343 10 121 2.94E-31 T 22-04-2016 RMET_RS12470 db5d36613f600e552edfd2919af855cf 121 Gene3D G3DSA:1.20.1300.10 10 121 7.4E-37 T 22-04-2016 RMET_RS12470 db5d36613f600e552edfd2919af855cf 121 PANTHER PTHR38689 18 121 4.6E-29 T 22-04-2016 RMET_RS12470 db5d36613f600e552edfd2919af855cf 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 107 2.1E-15 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RMET_RS12470 db5d36613f600e552edfd2919af855cf 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 15 119 7.2E-38 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RMET_RS12470 db5d36613f600e552edfd2919af855cf 121 PANTHER PTHR38689:SF1 18 121 4.6E-29 T 22-04-2016 RMET_RS12470 db5d36613f600e552edfd2919af855cf 121 PIRSF PIRSF000169 7 121 3.2E-40 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RMET_RS16305 51bac8d0a1a2be0f4ec0b4a9672569fa 81 SUPERFAMILY SSF82657 1 79 3.01E-28 T 22-04-2016 IPR002634 BolA protein RMET_RS16305 51bac8d0a1a2be0f4ec0b4a9672569fa 81 Gene3D G3DSA:3.30.300.90 2 78 4.3E-29 T 22-04-2016 IPR002634 BolA protein RMET_RS16305 51bac8d0a1a2be0f4ec0b4a9672569fa 81 PANTHER PTHR12735 1 77 9.8E-20 T 22-04-2016 RMET_RS16305 51bac8d0a1a2be0f4ec0b4a9672569fa 81 PIRSF PIRSF003113 1 81 8.0E-23 T 22-04-2016 IPR002634 BolA protein RMET_RS16305 51bac8d0a1a2be0f4ec0b4a9672569fa 81 Pfam PF01722 BolA-like protein 23 75 6.5E-19 T 22-04-2016 IPR002634 BolA protein RMET_RS13715 2077de4b501786b97128872a005f8685 292 SUPERFAMILY SSF53448 2 287 2.82E-94 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS13715 2077de4b501786b97128872a005f8685 292 PANTHER PTHR22572:SF105 3 270 1.3E-179 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RMET_RS13715 2077de4b501786b97128872a005f8685 292 PANTHER PTHR22572 3 270 1.3E-179 T 22-04-2016 RMET_RS13715 2077de4b501786b97128872a005f8685 292 Pfam PF00483 Nucleotidyl transferase 3 239 1.6E-72 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RMET_RS13715 2077de4b501786b97128872a005f8685 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 3 287 8.5E-159 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RMET_RS13715 2077de4b501786b97128872a005f8685 292 Gene3D G3DSA:3.90.550.10 1 266 7.6E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS11725 6f26976ae2bb49e59254fce945c253ca 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 7.8E-75 T 22-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type RMET_RS11725 6f26976ae2bb49e59254fce945c253ca 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 4.3E-102 T 22-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type RMET_RS05400 9738ddd3322cabce21823bb960eb0039 350 Gene3D G3DSA:3.60.21.10 63 263 1.0E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS05400 9738ddd3322cabce21823bb960eb0039 350 SUPERFAMILY SSF56300 47 263 6.07E-9 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS06275 c1e66c3ff714a5e34f1565447b45bc08 274 Pfam PF06067 Domain of unknown function (DUF932) 37 263 1.2E-58 T 22-04-2016 IPR026325 Protein of unknown function DUF932 RMET_RS02945 04c5c6791543a8b10a4e7f15c5bbd884 376 Pfam PF04982 HPP family 63 182 2.7E-38 T 22-04-2016 IPR007065 HPP RMET_RS02945 04c5c6791543a8b10a4e7f15c5bbd884 376 SMART SM00116 321 369 3.5E-7 T 22-04-2016 IPR000644 CBS domain RMET_RS02945 04c5c6791543a8b10a4e7f15c5bbd884 376 SMART SM00116 256 304 7.3E-10 T 22-04-2016 IPR000644 CBS domain RMET_RS02945 04c5c6791543a8b10a4e7f15c5bbd884 376 Gene3D G3DSA:3.10.580.10 246 370 1.3E-32 T 22-04-2016 RMET_RS02945 04c5c6791543a8b10a4e7f15c5bbd884 376 Pfam PF00571 CBS domain 250 302 8.1E-13 T 22-04-2016 IPR000644 CBS domain RMET_RS02945 04c5c6791543a8b10a4e7f15c5bbd884 376 Pfam PF00571 CBS domain 314 369 1.2E-12 T 22-04-2016 IPR000644 CBS domain RMET_RS02945 04c5c6791543a8b10a4e7f15c5bbd884 376 PANTHER PTHR33741 24 290 2.3E-31 T 22-04-2016 RMET_RS02945 04c5c6791543a8b10a4e7f15c5bbd884 376 SUPERFAMILY SSF54631 237 369 2.36E-36 T 22-04-2016 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 PANTHER PTHR10134 10 202 3.4E-72 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 4.1E-62 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 PRINTS PR00162 Rieske 2Fe-2S subunit signature 170 182 2.7E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.7E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 138 2.7E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 7 43 4.8E-10 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 PANTHER PTHR10134:SF8 10 202 3.4E-72 T 22-04-2016 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 SUPERFAMILY SSF50022 33 199 4.07E-38 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 Gene3D G3DSA:2.102.10.10 17 202 1.5E-40 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS16200 88b31a50f0a4a28b5f74fb017b21ddb6 205 Pfam PF00355 Rieske [2Fe-2S] domain 60 185 2.5E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 PANTHER PTHR11946 16 267 0.0 T 22-04-2016 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 PANTHER PTHR11946 290 924 0.0 T 22-04-2016 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 Gene3D G3DSA:1.10.730.10 673 820 1.2E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 35 672 5.2E-206 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 66 77 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 PANTHER PTHR11946:SF11 16 267 0.0 T 22-04-2016 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 PANTHER PTHR11946:SF11 290 924 0.0 T 22-04-2016 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 Gene3D G3DSA:3.40.50.620 421 667 3.0E-127 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 Gene3D G3DSA:3.40.50.620 22 205 3.0E-127 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 10 950 20.178 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 Pfam PF06827 Zinc finger found in FPG and IleRS 921 946 1.9E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 SUPERFAMILY SSF47323 683 949 1.29E-70 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 23 873 4.4E-260 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 Pfam PF08264 Anticodon-binding domain of tRNA 716 873 8.6E-25 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 SUPERFAMILY SSF52374 16 207 1.22E-125 T 22-04-2016 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 SUPERFAMILY SSF52374 418 680 1.22E-125 T 22-04-2016 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 592 601 4.5E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 59 70 4.5E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 416 431 4.5E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 4.5E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 SUPERFAMILY SSF50677 209 418 2.51E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RMET_RS14460 c99a861d99eed03cefd7fc36231150aa 959 Gene3D G3DSA:3.90.740.10 214 404 1.2E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 SUPERFAMILY SSF52242 232 388 1.96E-42 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 SUPERFAMILY SSF56507 395 486 3.4E-24 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 SUPERFAMILY SSF51717 2 107 5.65E-24 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 Gene3D G3DSA:1.10.288.10 430 486 7.9E-26 T 22-04-2016 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 SUPERFAMILY SSF47644 137 222 1.57E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 SMART SM01018 136 223 1.1E-40 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 Gene3D G3DSA:1.10.1240.10 135 220 3.3E-34 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 Pfam PF02607 B12 binding domain 140 215 7.8E-26 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 Gene3D G3DSA:3.20.20.20 1 113 1.4E-34 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 Pfam PF02310 B12 binding domain 238 331 3.2E-17 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 Pfam PF00809 Pterin binding enzyme 7 75 4.3E-11 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 431 486 9.6E-16 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RMET_RS31360 371f229541d455c5e2cb883a6d03c1e6 486 Gene3D G3DSA:3.40.50.280 236 389 9.2E-63 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS16935 b51a30806af1c4b4e9fa7c62595bf916 285 Gene3D G3DSA:1.20.1260.10 22 285 1.4E-90 T 22-04-2016 IPR012347 Ferritin-related RMET_RS16935 b51a30806af1c4b4e9fa7c62595bf916 285 PIRSF PIRSF037834 18 285 3.8E-99 T 22-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 RMET_RS16935 b51a30806af1c4b4e9fa7c62595bf916 285 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 32 285 3.3E-82 T 22-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 RMET_RS16935 b51a30806af1c4b4e9fa7c62595bf916 285 PANTHER PTHR30458:SF1 27 285 1.5E-86 T 22-04-2016 RMET_RS16935 b51a30806af1c4b4e9fa7c62595bf916 285 SUPERFAMILY SSF47240 22 279 1.22E-73 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS16935 b51a30806af1c4b4e9fa7c62595bf916 285 PANTHER PTHR30458 27 285 1.5E-86 T 22-04-2016 RMET_RS16935 b51a30806af1c4b4e9fa7c62595bf916 285 Pfam PF05138 Phenylacetic acid catabolic protein 21 285 1.5E-92 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 RMET_RS09655 bf4ed6eb34794982037a8a8b3664d21a 441 PANTHER PTHR11662:SF3 13 441 7.1E-142 T 22-04-2016 RMET_RS09655 bf4ed6eb34794982037a8a8b3664d21a 441 SUPERFAMILY SSF103473 25 438 2.75E-83 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS09655 bf4ed6eb34794982037a8a8b3664d21a 441 PANTHER PTHR11662 13 441 7.1E-142 T 22-04-2016 RMET_RS09655 bf4ed6eb34794982037a8a8b3664d21a 441 Gene3D G3DSA:1.20.1250.20 251 438 2.1E-24 T 22-04-2016 RMET_RS09655 bf4ed6eb34794982037a8a8b3664d21a 441 Pfam PF07690 Major Facilitator Superfamily 40 402 4.7E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS09655 bf4ed6eb34794982037a8a8b3664d21a 441 Gene3D G3DSA:1.20.1250.20 27 231 1.4E-46 T 22-04-2016 RMET_RS23095 4bfb154302c7ccc174264044f7cda9b6 141 SUPERFAMILY SSF81301 48 141 4.9E-9 T 22-04-2016 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 497 2.6E-162 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 PANTHER PTHR11236 5 297 8.7E-221 T 22-04-2016 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 PANTHER PTHR11236 313 502 8.7E-221 T 22-04-2016 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 PANTHER PTHR11236:SF9 5 297 8.7E-221 T 22-04-2016 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 PANTHER PTHR11236:SF9 313 502 8.7E-221 T 22-04-2016 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 172 3.1E-35 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 Pfam PF00425 chorismate binding enzyme 221 489 7.5E-94 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 PRINTS PR00095 Anthranilate synthase component I signature 431 445 1.1E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 PRINTS PR00095 Anthranilate synthase component I signature 446 460 1.1E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 PRINTS PR00095 Anthranilate synthase component I signature 351 364 1.1E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 PRINTS PR00095 Anthranilate synthase component I signature 337 350 1.1E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 SUPERFAMILY SSF56322 14 497 2.22E-155 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RMET_RS15935 a3586b72f99a917ffe71b4ca303c0c98 508 Gene3D G3DSA:3.60.120.10 12 501 1.1E-176 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RMET_RS11740 b36e4ecd4fce517551277547838a2b35 300 SUPERFAMILY SSF81301 3 156 2.29E-20 T 22-04-2016 RMET_RS11740 b36e4ecd4fce517551277547838a2b35 300 Pfam PF01909 Nucleotidyltransferase domain 31 74 3.9E-5 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RMET_RS11740 b36e4ecd4fce517551277547838a2b35 300 Gene3D G3DSA:3.30.460.10 19 140 2.1E-5 T 22-04-2016 RMET_RS09320 728f863a4b143e91345cd7bcba560d3b 416 Pfam PF13458 Periplasmic binding protein 30 379 4.8E-69 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS09320 728f863a4b143e91345cd7bcba560d3b 416 PANTHER PTHR30483 1 415 5.7E-47 T 22-04-2016 RMET_RS09320 728f863a4b143e91345cd7bcba560d3b 416 SUPERFAMILY SSF53822 29 380 4.71E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS09320 728f863a4b143e91345cd7bcba560d3b 416 Gene3D G3DSA:3.40.50.2300 29 239 1.2E-39 T 22-04-2016 RMET_RS13180 b16d7671195a342e8a296d3f14305096 291 Pfam PF01738 Dienelactone hydrolase family 63 288 4.3E-61 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RMET_RS13180 b16d7671195a342e8a296d3f14305096 291 SUPERFAMILY SSF53474 51 288 2.44E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS13180 b16d7671195a342e8a296d3f14305096 291 PANTHER PTHR17630 47 288 8.5E-95 T 22-04-2016 RMET_RS13180 b16d7671195a342e8a296d3f14305096 291 PANTHER PTHR17630:SF42 47 288 8.5E-95 T 22-04-2016 RMET_RS13180 b16d7671195a342e8a296d3f14305096 291 Gene3D G3DSA:3.40.50.1820 50 288 1.3E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS01890 5682f9a896f3e8be7ae91032f9d76937 223 Pfam PF02036 SCP-2 sterol transfer family 16 112 3.8E-13 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RMET_RS01890 5682f9a896f3e8be7ae91032f9d76937 223 PANTHER PTHR38693 1 214 9.2E-15 T 22-04-2016 RMET_RS03135 f00860c2e2505fd19a3e6453656d9b4b 572 Gene3D G3DSA:3.30.1330.60 439 551 4.8E-32 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS03135 f00860c2e2505fd19a3e6453656d9b4b 572 Pfam PF00691 OmpA family 447 543 1.3E-16 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS03135 f00860c2e2505fd19a3e6453656d9b4b 572 PANTHER PTHR30128 285 552 2.2E-40 T 22-04-2016 RMET_RS03135 f00860c2e2505fd19a3e6453656d9b4b 572 PRINTS PR01021 OMPA domain signature 493 509 3.6E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS03135 f00860c2e2505fd19a3e6453656d9b4b 572 PRINTS PR01021 OMPA domain signature 478 493 3.6E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS03135 f00860c2e2505fd19a3e6453656d9b4b 572 SUPERFAMILY SSF103088 427 549 1.44E-30 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS03135 f00860c2e2505fd19a3e6453656d9b4b 572 PANTHER PTHR30128:SF11 285 552 2.2E-40 T 22-04-2016 RMET_RS10570 724af68517859b794b5dd7c70e6abc13 235 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 25 227 1.5E-40 T 22-04-2016 RMET_RS10570 724af68517859b794b5dd7c70e6abc13 235 PANTHER PTHR23291 23 234 2.8E-36 T 22-04-2016 IPR006214 Bax inhibitor 1-related RMET_RS05710 5423ec3d3406a14e89283d7783236ee2 151 SMART SM00116 78 125 0.0038 T 22-04-2016 IPR000644 CBS domain RMET_RS05710 5423ec3d3406a14e89283d7783236ee2 151 SMART SM00116 13 60 6.3E-6 T 22-04-2016 IPR000644 CBS domain RMET_RS05710 5423ec3d3406a14e89283d7783236ee2 151 Pfam PF00571 CBS domain 15 59 1.9E-8 T 22-04-2016 IPR000644 CBS domain RMET_RS05710 5423ec3d3406a14e89283d7783236ee2 151 Pfam PF00571 CBS domain 72 124 3.5E-9 T 22-04-2016 IPR000644 CBS domain RMET_RS05710 5423ec3d3406a14e89283d7783236ee2 151 Gene3D G3DSA:3.10.580.10 1 126 4.4E-28 T 22-04-2016 RMET_RS05710 5423ec3d3406a14e89283d7783236ee2 151 PANTHER PTHR11911 1 140 3.5E-26 T 22-04-2016 RMET_RS05710 5423ec3d3406a14e89283d7783236ee2 151 SUPERFAMILY SSF54631 1 143 4.93E-30 T 22-04-2016 RMET_RS10965 687b415873affe1bd2fa5bc3bcc986dc 321 PANTHER PTHR30425 14 321 3.1E-146 T 22-04-2016 RMET_RS10965 687b415873affe1bd2fa5bc3bcc986dc 321 SUPERFAMILY SSF161098 38 306 6.41E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10965 687b415873affe1bd2fa5bc3bcc986dc 321 PANTHER PTHR30425:SF1 14 321 3.1E-146 T 22-04-2016 RMET_RS10965 687b415873affe1bd2fa5bc3bcc986dc 321 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 21 313 3.4E-90 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RMET_RS10965 687b415873affe1bd2fa5bc3bcc986dc 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 310 8.4E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10965 687b415873affe1bd2fa5bc3bcc986dc 321 Gene3D G3DSA:1.10.3720.10 30 317 1.2E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08300 a8641793595d3a59a66d606af5141e8e 480 PIRSF PIRSF004548 1 468 2.0E-136 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD RMET_RS08300 a8641793595d3a59a66d606af5141e8e 480 Pfam PF06123 Inner membrane protein CreD 9 456 5.6E-146 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD RMET_RS08300 a8641793595d3a59a66d606af5141e8e 480 PANTHER PTHR30092 9 470 1.8E-133 T 22-04-2016 RMET_RS21820 b2daea3dcde0b4c0d705bb741b199226 266 PANTHER PTHR11119:SF49 24 266 1.8E-90 T 22-04-2016 RMET_RS21820 b2daea3dcde0b4c0d705bb741b199226 266 Pfam PF00860 Permease family 42 264 6.5E-39 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS21820 b2daea3dcde0b4c0d705bb741b199226 266 PANTHER PTHR11119 24 266 1.8E-90 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS31225 b9f64034dac07ab476715d5397b7174d 84 SUPERFAMILY SSF53182 2 82 1.96E-29 T 22-04-2016 RMET_RS31225 b9f64034dac07ab476715d5397b7174d 84 PANTHER PTHR23402:SF1 1 84 1.0E-24 T 22-04-2016 RMET_RS31225 b9f64034dac07ab476715d5397b7174d 84 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 5 25 2.7E-16 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS31225 b9f64034dac07ab476715d5397b7174d 84 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 57 73 2.7E-16 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS31225 b9f64034dac07ab476715d5397b7174d 84 PANTHER PTHR23402 1 84 1.0E-24 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RMET_RS31225 b9f64034dac07ab476715d5397b7174d 84 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 55 69 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RMET_RS31225 b9f64034dac07ab476715d5397b7174d 84 Pfam PF01470 Pyroglutamyl peptidase 2 81 1.2E-37 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RMET_RS31225 b9f64034dac07ab476715d5397b7174d 84 Gene3D G3DSA:3.40.630.20 2 83 9.8E-29 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 SUPERFAMILY SSF52374 1 280 2.22E-96 T 22-04-2016 RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 PANTHER PTHR21299:SF1 1 280 6.4E-112 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.2E-96 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 6.3E-87 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 76 3.8E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 Gene3D G3DSA:3.40.50.620 1 169 1.3E-71 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 37.651 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 PANTHER PTHR21299 1 280 6.4E-112 T 22-04-2016 RMET_RS13925 90c79412c616ad74e9bb3e0c50c77d56 280 Gene3D G3DSA:3.30.1300.10 172 280 6.2E-28 T 22-04-2016 RMET_RS03420 da0eeead2442c3fefb3b61220cd091c6 175 Gene3D G3DSA:3.90.80.10 3 174 8.8E-59 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RMET_RS03420 da0eeead2442c3fefb3b61220cd091c6 175 SUPERFAMILY SSF50324 5 175 6.15E-65 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RMET_RS03420 da0eeead2442c3fefb3b61220cd091c6 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.158 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RMET_RS03420 da0eeead2442c3fefb3b61220cd091c6 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.4E-50 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RMET_RS03420 da0eeead2442c3fefb3b61220cd091c6 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RMET_RS03420 da0eeead2442c3fefb3b61220cd091c6 175 PANTHER PTHR10286 6 175 4.1E-68 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RMET_RS09100 2399b82f9bb398bbc6a367b2e8ba43bf 264 SMART SM00346 17 107 5.0E-15 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS09100 2399b82f9bb398bbc6a367b2e8ba43bf 264 PANTHER PTHR30136 9 262 1.1E-71 T 22-04-2016 RMET_RS09100 2399b82f9bb398bbc6a367b2e8ba43bf 264 SUPERFAMILY SSF46785 19 89 1.36E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09100 2399b82f9bb398bbc6a367b2e8ba43bf 264 PANTHER PTHR30136:SF4 9 262 1.1E-71 T 22-04-2016 RMET_RS09100 2399b82f9bb398bbc6a367b2e8ba43bf 264 Gene3D G3DSA:3.30.450.40 88 263 9.7E-31 T 22-04-2016 IPR029016 GAF domain-like RMET_RS09100 2399b82f9bb398bbc6a367b2e8ba43bf 264 Pfam PF09339 IclR helix-turn-helix domain 20 69 7.3E-10 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS09100 2399b82f9bb398bbc6a367b2e8ba43bf 264 Gene3D G3DSA:1.10.10.10 11 86 5.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09100 2399b82f9bb398bbc6a367b2e8ba43bf 264 SUPERFAMILY SSF55781 75 262 3.14E-31 T 22-04-2016 IPR029016 GAF domain-like RMET_RS15865 bce42b72255f5fea8fec61edc82c07c9 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 134 1.8E-24 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RMET_RS15865 bce42b72255f5fea8fec61edc82c07c9 146 Pfam PF03061 Thioesterase superfamily 52 124 1.4E-13 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS15865 bce42b72255f5fea8fec61edc82c07c9 146 Gene3D G3DSA:3.10.129.10 6 142 8.0E-48 T 22-04-2016 IPR029069 HotDog domain RMET_RS15865 bce42b72255f5fea8fec61edc82c07c9 146 PANTHER PTHR12418:SF24 16 131 7.4E-41 T 22-04-2016 RMET_RS15865 bce42b72255f5fea8fec61edc82c07c9 146 PANTHER PTHR12418 16 131 7.4E-41 T 22-04-2016 RMET_RS15865 bce42b72255f5fea8fec61edc82c07c9 146 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 24 135 5.2E-43 T 22-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RMET_RS15865 bce42b72255f5fea8fec61edc82c07c9 146 SUPERFAMILY SSF54637 4 131 2.26E-31 T 22-04-2016 IPR029069 HotDog domain RMET_RS07505 56bbdcac4f6a99026744a2084cf24f9d 658 Pfam PF11843 Protein of unknown function (DUF3363) 286 657 1.6E-142 T 22-04-2016 IPR021795 Protein of unknown function DUF3363 RMET_RS26485 d5c9d49a9d48a308e5047ec4e844a562 143 PANTHER PTHR30349 1 143 1.8E-50 T 22-04-2016 RMET_RS26485 d5c9d49a9d48a308e5047ec4e844a562 143 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 19 143 2.9E-37 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS26485 d5c9d49a9d48a308e5047ec4e844a562 143 PANTHER PTHR30349:SF16 1 143 1.8E-50 T 22-04-2016 RMET_RS06075 691ebf960b52733d214c5e4c668b46c1 386 SUPERFAMILY SSF56601 111 349 8.58E-62 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS06075 691ebf960b52733d214c5e4c668b46c1 386 PANTHER PTHR21581 111 354 1.2E-90 T 22-04-2016 RMET_RS06075 691ebf960b52733d214c5e4c668b46c1 386 PANTHER PTHR21581:SF8 111 354 1.2E-90 T 22-04-2016 RMET_RS06075 691ebf960b52733d214c5e4c668b46c1 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 107 331 4.0E-60 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RMET_RS06075 691ebf960b52733d214c5e4c668b46c1 386 Gene3D G3DSA:3.40.710.10 107 348 2.8E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS06075 691ebf960b52733d214c5e4c668b46c1 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 189 206 1.71E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RMET_RS06075 691ebf960b52733d214c5e4c668b46c1 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 139 150 1.71E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RMET_RS06075 691ebf960b52733d214c5e4c668b46c1 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 216 229 1.71E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RMET_RS04200 940542e0cae07dc43d1aa26683b86b6f 228 SMART SM00702 1 178 1.4E-23 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RMET_RS04200 940542e0cae07dc43d1aa26683b86b6f 228 PANTHER PTHR41536 2 228 9.9E-106 T 22-04-2016 RMET_RS04200 940542e0cae07dc43d1aa26683b86b6f 228 PANTHER PTHR41536:SF1 2 228 9.9E-106 T 22-04-2016 RMET_RS04200 940542e0cae07dc43d1aa26683b86b6f 228 SUPERFAMILY SSF51197 5 176 1.37E-5 T 22-04-2016 RMET_RS04200 940542e0cae07dc43d1aa26683b86b6f 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 83 177 1.8E-13 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RMET_RS04200 940542e0cae07dc43d1aa26683b86b6f 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 44.855 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 SMART SM00226 4 153 2.1E-39 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 Gene3D G3DSA:3.40.50.270 1 154 1.2E-50 T 22-04-2016 RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 PANTHER PTHR11717 2 157 3.9E-54 T 22-04-2016 RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 PANTHER PTHR11717:SF7 2 157 3.9E-54 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 SUPERFAMILY SSF52788 2 154 7.33E-49 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 149 5.1E-37 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 3.0E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 3.0E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 3.0E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RMET_RS05140 dd13d258cf19c905f87c447f0278720a 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 3.0E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 PANTHER PTHR10909 1 396 1.8E-274 T 22-04-2016 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 PANTHER PTHR10909:SF307 1 396 1.8E-274 T 22-04-2016 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 SUPERFAMILY SSF47203 246 395 2.9E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 1.1E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 SUPERFAMILY SSF56645 7 243 5.5E-78 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 231 2.5E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 Gene3D G3DSA:1.10.540.10 5 134 3.0E-44 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 389 8.0E-26 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 Gene3D G3DSA:2.40.110.10 135 231 1.3E-31 T 22-04-2016 RMET_RS13335 4bfc24ffd8291b4476582e6b2da46661 397 Gene3D G3DSA:1.20.140.10 232 393 8.2E-42 T 22-04-2016 RMET_RS09355 7d2c7e61825e1dfd6e1c71ed1def19c6 264 PANTHER PTHR10657 26 264 6.6E-39 T 22-04-2016 RMET_RS09355 7d2c7e61825e1dfd6e1c71ed1def19c6 264 Pfam PF00639 PPIC-type PPIASE domain 141 218 1.1E-21 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RMET_RS09355 7d2c7e61825e1dfd6e1c71ed1def19c6 264 SUPERFAMILY SSF54534 125 222 4.45E-29 T 22-04-2016 RMET_RS09355 7d2c7e61825e1dfd6e1c71ed1def19c6 264 PANTHER PTHR10657:SF11 26 264 6.6E-39 T 22-04-2016 RMET_RS09355 7d2c7e61825e1dfd6e1c71ed1def19c6 264 SUPERFAMILY SSF109998 26 158 1.18E-21 T 22-04-2016 IPR027304 Trigger factor/SurA domain RMET_RS09355 7d2c7e61825e1dfd6e1c71ed1def19c6 264 Gene3D G3DSA:3.10.50.40 122 241 1.3E-42 T 22-04-2016 RMET_RS08165 14e86bdd4b51c52a6b60265f90582443 499 Gene3D G3DSA:3.40.309.10 281 469 3.2E-68 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS08165 14e86bdd4b51c52a6b60265f90582443 499 Gene3D G3DSA:3.40.605.10 22 280 3.2E-101 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS08165 14e86bdd4b51c52a6b60265f90582443 499 Pfam PF00171 Aldehyde dehydrogenase family 29 493 1.4E-178 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS08165 14e86bdd4b51c52a6b60265f90582443 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RMET_RS08165 14e86bdd4b51c52a6b60265f90582443 499 PANTHER PTHR11699 1 498 6.7E-287 T 22-04-2016 RMET_RS08165 14e86bdd4b51c52a6b60265f90582443 499 SUPERFAMILY SSF53720 15 497 4.19E-175 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS08165 14e86bdd4b51c52a6b60265f90582443 499 PANTHER PTHR11699:SF210 1 498 6.7E-287 T 22-04-2016 RMET_RS08165 14e86bdd4b51c52a6b60265f90582443 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PANTHER PTHR11206 67 82 3.9E-76 T 22-04-2016 RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PIRSF PIRSF002869 1 515 1.1E-157 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PANTHER PTHR11206 222 446 3.9E-76 T 22-04-2016 RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 505 1.4E-143 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 Pfam PF03023 MviN-like protein 28 471 8.9E-140 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PANTHER PTHR11206:SF90 67 82 3.9E-76 T 22-04-2016 RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PANTHER PTHR11206:SF90 222 446 3.9E-76 T 22-04-2016 RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PRINTS PR01806 Virulence factor MviN signature 52 68 5.2E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PRINTS PR01806 Virulence factor MviN signature 361 380 5.2E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PRINTS PR01806 Virulence factor MviN signature 157 178 5.2E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PRINTS PR01806 Virulence factor MviN signature 263 289 5.2E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PRINTS PR01806 Virulence factor MviN signature 133 157 5.2E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PRINTS PR01806 Virulence factor MviN signature 33 52 5.2E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14560 6c9e06203fd6e9def603cf5bc95cc0f3 516 PRINTS PR01806 Virulence factor MviN signature 413 430 5.2E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 390 406 4.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 242 256 4.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 271 281 4.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 340 352 4.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 447 464 4.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 Gene3D G3DSA:3.30.70.1170 193 250 3.3E-17 T 22-04-2016 RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 PANTHER PTHR22807 160 464 1.6E-86 T 22-04-2016 RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 Pfam PF01189 16S rRNA methyltransferase RsmB/F 261 462 1.7E-52 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 Gene3D G3DSA:3.40.50.150 252 464 1.8E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14425 21866ba8427a67d851e7c87166d40978 466 SUPERFAMILY SSF53335 163 464 4.91E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS04685 8619a45f4db38ea55e4438de4bca4a87 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 157 3.7E-49 T 22-04-2016 RMET_RS04685 8619a45f4db38ea55e4438de4bca4a87 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 157 3.8E-62 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RMET_RS04685 8619a45f4db38ea55e4438de4bca4a87 166 PIRSF PIRSF000216 1 166 4.1E-57 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RMET_RS04685 8619a45f4db38ea55e4438de4bca4a87 166 PANTHER PTHR10371 2 157 5.1E-59 T 22-04-2016 RMET_RS04685 8619a45f4db38ea55e4438de4bca4a87 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RMET_RS04685 8619a45f4db38ea55e4438de4bca4a87 166 Gene3D G3DSA:3.40.30.10 76 155 2.3E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS04685 8619a45f4db38ea55e4438de4bca4a87 166 SUPERFAMILY SSF52833 3 159 1.34E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 Pfam PF00005 ABC transporter 64 214 1.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 264 350 5.2E-27 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 266 330 5.7E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 SUPERFAMILY SSF52540 51 286 7.38E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 PANTHER PTHR24220:SF336 60 350 4.0E-137 T 22-04-2016 RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 PANTHER PTHR24220:SF336 29 39 4.0E-137 T 22-04-2016 RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 Gene3D G3DSA:3.40.50.300 26 287 1.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 ProSitePatterns PS00211 ABC transporters family signature. 187 201 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 PANTHER PTHR24220 60 350 4.0E-137 T 22-04-2016 RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 PANTHER PTHR24220 29 39 4.0E-137 T 22-04-2016 RMET_RS15790 12a6c867d5118265421a63f03f88212a 354 SMART SM00382 72 264 1.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01515 4debf0e17b3943cfe1b1b0215eb6b867 296 Gene3D G3DSA:3.40.50.300 1 165 4.9E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01515 4debf0e17b3943cfe1b1b0215eb6b867 296 PANTHER PTHR30448 1 293 1.0E-113 T 22-04-2016 RMET_RS01515 4debf0e17b3943cfe1b1b0215eb6b867 296 SUPERFAMILY SSF52540 2 164 1.13E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01515 4debf0e17b3943cfe1b1b0215eb6b867 296 PANTHER PTHR30448:SF0 1 293 1.0E-113 T 22-04-2016 RMET_RS01515 4debf0e17b3943cfe1b1b0215eb6b867 296 Pfam PF03668 P-loop ATPase protein family 1 292 8.7E-92 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RMET_RS01515 4debf0e17b3943cfe1b1b0215eb6b867 296 PIRSF PIRSF005052 1 295 1.8E-109 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RMET_RS01515 4debf0e17b3943cfe1b1b0215eb6b867 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 294 39.314 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 PANTHER PTHR30346:SF6 1 281 1.7E-69 T 22-04-2016 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 PANTHER PTHR30346 1 281 1.7E-69 T 22-04-2016 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 Gene3D G3DSA:3.40.190.10 180 271 1.9E-22 T 22-04-2016 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 SUPERFAMILY SSF53850 111 289 5.89E-25 T 22-04-2016 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 Pfam PF03466 LysR substrate binding domain 112 290 5.6E-29 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 SUPERFAMILY SSF46785 4 88 1.41E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 Gene3D G3DSA:3.40.190.10 112 179 3.4E-13 T 22-04-2016 RMET_RS09720 d0ade773665a5aef4c15fc90f63f7daf 298 Gene3D G3DSA:1.10.10.10 3 80 5.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS29010 a5231f922b7c1703442b0fb8b4734743 98 PANTHER PTHR30160 1 83 2.1E-15 T 22-04-2016 RMET_RS29010 a5231f922b7c1703442b0fb8b4734743 98 Gene3D G3DSA:3.40.50.2000 2 95 1.4E-21 T 22-04-2016 RMET_RS29010 a5231f922b7c1703442b0fb8b4734743 98 PANTHER PTHR30160:SF8 1 83 2.1E-15 T 22-04-2016 RMET_RS29010 a5231f922b7c1703442b0fb8b4734743 98 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 2 89 3.1E-22 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RMET_RS29010 a5231f922b7c1703442b0fb8b4734743 98 SUPERFAMILY SSF53756 2 93 1.51E-19 T 22-04-2016 RMET_RS05055 7936ae840c7a89ef12009a55b22cf3e3 134 Pfam PF00085 Thioredoxin 21 111 7.1E-6 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RMET_RS05055 7936ae840c7a89ef12009a55b22cf3e3 134 SUPERFAMILY SSF52833 9 123 6.42E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS05055 7936ae840c7a89ef12009a55b22cf3e3 134 Gene3D G3DSA:3.40.30.10 16 121 3.3E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 PANTHER PTHR32071:SF17 4 208 5.4E-37 T 22-04-2016 RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 SUPERFAMILY SSF46689 165 226 6.27E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 Pfam PF00072 Response regulator receiver domain 4 114 8.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 SUPERFAMILY SSF52172 1 124 1.42E-36 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 Gene3D G3DSA:1.10.10.60 179 226 3.3E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 Gene3D G3DSA:3.40.50.2300 1 122 3.2E-34 T 22-04-2016 RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 SMART SM00448 2 114 3.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 Pfam PF02954 Bacterial regulatory protein, Fis family 186 224 1.2E-4 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS17880 8f9c6e97f48aa41b65f58864cb7b172a 238 PANTHER PTHR32071 4 208 5.4E-37 T 22-04-2016 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 84 1.6E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 Gene3D G3DSA:3.40.190.10 112 195 6.4E-32 T 22-04-2016 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 SUPERFAMILY SSF46785 23 104 1.12E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 PANTHER PTHR30537 17 312 9.9E-106 T 22-04-2016 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 Gene3D G3DSA:3.40.190.10 196 275 5.5E-16 T 22-04-2016 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 Pfam PF03466 LysR substrate binding domain 110 306 1.1E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 PANTHER PTHR30537:SF26 17 312 9.9E-106 T 22-04-2016 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 SUPERFAMILY SSF53850 111 310 2.33E-38 T 22-04-2016 RMET_RS00305 cb395910d479800c2ab32be8b40d84ac 318 Gene3D G3DSA:1.10.10.10 22 102 9.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 249 433 1.7E-55 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 213.481 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 PANTHER PTHR21343 1 481 3.3E-218 T 22-04-2016 RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 SUPERFAMILY SSF52317 250 443 3.11E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 Gene3D G3DSA:3.40.50.880 249 443 1.4E-28 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 PANTHER PTHR21343:SF1 1 481 3.3E-218 T 22-04-2016 RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 220 7.8E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 SUPERFAMILY SSF52540 1 233 6.65E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 Gene3D G3DSA:3.40.50.300 1 232 3.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13945 d8a3f2fd4c8eba784fde0052cf318236 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 476 1.3E-140 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RMET_RS13900 841af671f11beee462d75d1280cef862 182 Pfam PF04355 SmpA / OmlA family 104 169 9.6E-9 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RMET_RS12535 b42d8f514244e9c965f52ffa4dab80de 118 SMART SM00418 10 88 4.6E-19 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS12535 b42d8f514244e9c965f52ffa4dab80de 118 Gene3D G3DSA:1.10.10.10 4 108 4.8E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12535 b42d8f514244e9c965f52ffa4dab80de 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 6.7E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS12535 b42d8f514244e9c965f52ffa4dab80de 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 6.7E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS12535 b42d8f514244e9c965f52ffa4dab80de 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 6.7E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS12535 b42d8f514244e9c965f52ffa4dab80de 118 PANTHER PTHR33154 8 100 1.2E-22 T 22-04-2016 RMET_RS12535 b42d8f514244e9c965f52ffa4dab80de 118 Pfam PF12840 Helix-turn-helix domain 11 64 1.1E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12535 b42d8f514244e9c965f52ffa4dab80de 118 SUPERFAMILY SSF46785 6 104 3.02E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07945 8008f0c836d601c20b2498243a010e4c 242 PANTHER PTHR11922:SF11 38 217 2.1E-44 T 22-04-2016 RMET_RS07945 8008f0c836d601c20b2498243a010e4c 242 PANTHER PTHR11922 38 217 2.1E-44 T 22-04-2016 RMET_RS07945 8008f0c836d601c20b2498243a010e4c 242 Gene3D G3DSA:3.40.50.880 12 237 1.6E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS07945 8008f0c836d601c20b2498243a010e4c 242 Pfam PF00117 Glutamine amidotransferase class-I 27 192 2.7E-16 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RMET_RS07945 8008f0c836d601c20b2498243a010e4c 242 SUPERFAMILY SSF52317 36 238 6.27E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS10835 0816074de49620c30e05126fc730403d 91 SMART SM00530 8 62 0.0076 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS10835 0816074de49620c30e05126fc730403d 91 Gene3D G3DSA:1.10.260.40 3 56 1.2E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS10835 0816074de49620c30e05126fc730403d 91 SUPERFAMILY SSF47413 3 57 1.46E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS10835 0816074de49620c30e05126fc730403d 91 Pfam PF01381 Helix-turn-helix 9 57 5.8E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS00095 73a12ba314d19ba44a22b4c45d427ac1 146 Gene3D G3DSA:3.10.580.10 13 127 7.0E-33 T 22-04-2016 RMET_RS00095 73a12ba314d19ba44a22b4c45d427ac1 146 PANTHER PTHR11911 16 144 8.0E-32 T 22-04-2016 RMET_RS00095 73a12ba314d19ba44a22b4c45d427ac1 146 Pfam PF00571 CBS domain 16 60 2.4E-9 T 22-04-2016 IPR000644 CBS domain RMET_RS00095 73a12ba314d19ba44a22b4c45d427ac1 146 Pfam PF00571 CBS domain 73 124 2.2E-11 T 22-04-2016 IPR000644 CBS domain RMET_RS00095 73a12ba314d19ba44a22b4c45d427ac1 146 SUPERFAMILY SSF54631 15 142 3.28E-32 T 22-04-2016 RMET_RS00095 73a12ba314d19ba44a22b4c45d427ac1 146 SMART SM00116 80 127 8.9E-7 T 22-04-2016 IPR000644 CBS domain RMET_RS00095 73a12ba314d19ba44a22b4c45d427ac1 146 SMART SM00116 15 62 2.0E-7 T 22-04-2016 IPR000644 CBS domain RMET_RS17270 1177628eab29858e0644d8fa4bd61c72 206 SUPERFAMILY SSF55729 33 197 2.23E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS17270 1177628eab29858e0644d8fa4bd61c72 206 Gene3D G3DSA:3.40.630.30 32 198 2.2E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS17270 1177628eab29858e0644d8fa4bd61c72 206 PANTHER PTHR23091 3 197 8.6E-31 T 22-04-2016 RMET_RS17270 1177628eab29858e0644d8fa4bd61c72 206 Pfam PF13420 Acetyltransferase (GNAT) domain 34 191 1.1E-23 T 22-04-2016 RMET_RS17270 1177628eab29858e0644d8fa4bd61c72 206 PANTHER PTHR23091:SF187 3 197 8.6E-31 T 22-04-2016 RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 Pfam PF16200 C-terminal region of band_7 246 305 2.4E-25 T 22-04-2016 IPR032435 Band 7, C-terminal extension RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 Pfam PF01145 SPFH domain / Band 7 family 27 197 2.1E-30 T 22-04-2016 IPR001107 Band 7 domain RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 PANTHER PTHR10264 9 304 2.0E-137 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 PRINTS PR00721 Stomatin signature 30 52 3.6E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 PRINTS PR00721 Stomatin signature 113 130 3.6E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 PRINTS PR00721 Stomatin signature 78 99 3.6E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 PRINTS PR00721 Stomatin signature 176 197 3.6E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 PRINTS PR00721 Stomatin signature 157 175 3.6E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 PRINTS PR00721 Stomatin signature 133 156 3.6E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 SMART SM00244 23 181 6.6E-57 T 22-04-2016 IPR001107 Band 7 domain RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 SUPERFAMILY SSF117892 54 188 7.32E-40 T 22-04-2016 IPR001107 Band 7 domain RMET_RS07330 3737db2c9e70f36e12ec6a8692b4dc43 312 PANTHER PTHR10264:SF27 9 304 2.0E-137 T 22-04-2016 RMET_RS13960 a91caecd2426118b1a03d0d6258558c3 343 PANTHER PTHR11751:SF3 10 332 4.3E-43 T 22-04-2016 RMET_RS13960 a91caecd2426118b1a03d0d6258558c3 343 Gene3D G3DSA:3.40.640.10 46 243 5.5E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS13960 a91caecd2426118b1a03d0d6258558c3 343 PANTHER PTHR11751 10 332 4.3E-43 T 22-04-2016 RMET_RS13960 a91caecd2426118b1a03d0d6258558c3 343 SUPERFAMILY SSF53383 5 333 1.31E-51 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS13960 a91caecd2426118b1a03d0d6258558c3 343 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 332 2.9E-107 T 22-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 RMET_RS13960 a91caecd2426118b1a03d0d6258558c3 343 Pfam PF00155 Aminotransferase class I and II 72 317 3.4E-24 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 PIRSF PIRSF000423 40 478 4.2E-186 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 SUPERFAMILY SSF55729 305 452 1.59E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 44 478 211.968 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 Pfam PF00583 Acetyltransferase (GNAT) family 377 449 2.1E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 Gene3D G3DSA:3.40.630.30 333 477 2.1E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 PANTHER PTHR30602 48 478 2.5E-160 T 22-04-2016 RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 SUPERFAMILY SSF53633 46 329 7.46E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 Gene3D G3DSA:3.40.1160.10 64 326 9.4E-61 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 49 478 1.9E-200 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RMET_RS10355 7a43d3904f075e470f8fd12fa211e180 478 Pfam PF00696 Amino acid kinase family 66 299 4.3E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PANTHER PTHR12428 180 542 9.6E-104 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 173 193 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 472 494 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 334 354 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 89 110 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 226 244 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 508 531 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 425 448 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 261 276 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.7E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 544 24.994 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PANTHER PTHR12428:SF14 180 542 9.6E-104 T 22-04-2016 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 Pfam PF02096 60Kd inner membrane protein 364 542 2.4E-64 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 Pfam PF14849 YidC periplasmic domain 84 353 6.3E-86 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 363 542 1.3E-74 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR01900 YidC translocation/secretion protein signature 478 493 5.0E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR01900 YidC translocation/secretion protein signature 349 365 5.0E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 5.0E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RMET_RS18150 6a3631e570514ed73293a3e49ca125ec 555 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 362 1.3E-115 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 SUPERFAMILY SSF46689 1 67 9.75E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.7E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.7E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 Gene3D G3DSA:1.10.10.60 12 60 8.3E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 SUPERFAMILY SSF48498 83 203 4.45E-17 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 PANTHER PTHR30328 1 209 3.3E-39 T 22-04-2016 RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.7E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 5.6E-33 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 PANTHER PTHR30328:SF26 1 209 3.3E-39 T 22-04-2016 RMET_RS18020 29cb45bceb4466a02ab8fddb7d88abbe 242 Gene3D G3DSA:1.10.357.10 61 206 2.2E-23 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Gene3D G3DSA:1.10.601.10 252 593 4.7E-129 T 22-04-2016 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Gene3D G3DSA:1.10.601.10 76 251 1.9E-4 T 22-04-2016 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Pfam PF04539 Sigma-70 region 3 603 679 2.6E-25 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Pfam PF00140 Sigma-70 factor, region 1.2 235 267 7.6E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Gene3D G3DSA:1.10.10.10 687 757 4.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Gene3D G3DSA:1.10.10.10 597 648 5.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PANTHER PTHR30603 131 289 2.7E-224 T 22-04-2016 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PANTHER PTHR30603 471 757 2.7E-224 T 22-04-2016 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PRINTS PR00046 Major sigma-70 factor signature 732 743 7.9E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PRINTS PR00046 Major sigma-70 factor signature 572 580 7.9E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PRINTS PR00046 Major sigma-70 factor signature 717 732 7.9E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PRINTS PR00046 Major sigma-70 factor signature 548 561 7.9E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PRINTS PR00046 Major sigma-70 factor signature 696 708 7.9E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PANTHER PTHR30603:SF0 131 289 2.7E-224 T 22-04-2016 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 PANTHER PTHR30603:SF0 471 757 2.7E-224 T 22-04-2016 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Pfam PF04542 Sigma-70 region 2 526 593 8.5E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 SUPERFAMILY SSF88659 654 755 1.85E-27 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 548 561 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 717 743 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Pfam PF03979 Sigma-70 factor, region 1.1 140 218 1.2E-28 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 SUPERFAMILY SSF88659 597 670 1.23E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Pfam PF04545 Sigma-70, region 4 692 745 3.5E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 520 756 6.3E-119 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 SUPERFAMILY SSF88946 252 591 3.14E-102 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 131 757 42.664 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 520 745 2.9E-39 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS13100 2a532e136d94187e5cfd610ff61d71f1 759 Pfam PF04546 Sigma-70, non-essential region 276 493 3.4E-66 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS17635 8f0215f2763d11ff22cafcc85039bec5 247 PANTHER PTHR24220 6 245 6.3E-109 T 22-04-2016 RMET_RS17635 8f0215f2763d11ff22cafcc85039bec5 247 Pfam PF00005 ABC transporter 21 170 3.1E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS17635 8f0215f2763d11ff22cafcc85039bec5 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS17635 8f0215f2763d11ff22cafcc85039bec5 247 Gene3D G3DSA:3.40.50.300 3 242 7.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17635 8f0215f2763d11ff22cafcc85039bec5 247 SMART SM00382 29 240 7.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS17635 8f0215f2763d11ff22cafcc85039bec5 247 PANTHER PTHR24220:SF568 6 245 6.3E-109 T 22-04-2016 RMET_RS17635 8f0215f2763d11ff22cafcc85039bec5 247 SUPERFAMILY SSF52540 4 241 5.55E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17495 62bdec3696c655bd09bcd98ecb966d0b 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 29.995 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RMET_RS17495 62bdec3696c655bd09bcd98ecb966d0b 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RMET_RS17495 62bdec3696c655bd09bcd98ecb966d0b 126 Gene3D G3DSA:2.40.50.100 6 124 2.2E-47 T 22-04-2016 RMET_RS17495 62bdec3696c655bd09bcd98ecb966d0b 126 SUPERFAMILY SSF51230 2 124 8.51E-42 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS17495 62bdec3696c655bd09bcd98ecb966d0b 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 7.8E-48 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 RMET_RS17495 62bdec3696c655bd09bcd98ecb966d0b 126 Pfam PF01597 Glycine cleavage H-protein 7 123 5.2E-44 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RMET_RS17495 62bdec3696c655bd09bcd98ecb966d0b 126 PANTHER PTHR11715 1 122 2.9E-62 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 SUPERFAMILY SSF53323 746 998 3.01E-31 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 754 940 5.7E-23 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 SUPERFAMILY SSF52518 461 647 3.37E-15 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 PANTHER PTHR18968 359 782 3.5E-185 T 22-04-2016 RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 SUPERFAMILY SSF52518 32 218 4.83E-19 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 Gene3D G3DSA:3.40.50.970 514 564 5.1E-7 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 481 629 3.3E-7 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 Gene3D G3DSA:3.40.920.10 747 945 4.7E-15 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RMET_RS17060 7304664d405a3c56a6774699015e7f38 1197 PANTHER PTHR18968:SF134 359 782 3.5E-185 T 22-04-2016 RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 260 4.6E-57 T 22-04-2016 RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 Gene3D G3DSA:3.40.50.720 6 261 4.4E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.4E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 2.4E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 2.4E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 2.4E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.4E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 2.4E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 SUPERFAMILY SSF51735 5 260 7.05E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PANTHER PTHR24322 169 201 1.5E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05770 735f23a19453500e165f8dde204d2e59 261 PANTHER PTHR24322 14 138 1.5E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS21720 626631d13d4d0ea94d10df78023dacb8 245 SUPERFAMILY SSF56719 1 242 3.66E-110 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RMET_RS21720 626631d13d4d0ea94d10df78023dacb8 245 Gene3D G3DSA:3.90.199.10 1 149 1.4E-68 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RMET_RS21720 626631d13d4d0ea94d10df78023dacb8 245 PANTHER PTHR10169:SF48 1 241 1.6E-141 T 22-04-2016 RMET_RS21720 626631d13d4d0ea94d10df78023dacb8 245 PANTHER PTHR10169 1 241 1.6E-141 T 22-04-2016 RMET_RS21720 626631d13d4d0ea94d10df78023dacb8 245 Gene3D G3DSA:3.30.1360.40 169 244 2.2E-30 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RMET_RS21720 626631d13d4d0ea94d10df78023dacb8 245 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 1 243 1.5E-99 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS21720 626631d13d4d0ea94d10df78023dacb8 245 SMART SM00434 1 245 5.4E-77 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 Gene3D G3DSA:3.40.50.2300 171 326 4.8E-16 T 22-04-2016 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 SUPERFAMILY SSF53822 47 396 2.05E-81 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 Gene3D G3DSA:3.40.50.2300 42 170 5.6E-46 T 22-04-2016 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 Gene3D G3DSA:3.40.50.2300 327 381 5.6E-46 T 22-04-2016 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 279 297 4.7E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 69 85 4.7E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 4.7E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 106 4.7E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 Pfam PF13458 Periplasmic binding protein 47 382 4.4E-70 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 PANTHER PTHR30483 39 391 3.8E-77 T 22-04-2016 RMET_RS15785 18f85d0b4af0dc7347a2a37f97ea8ba7 398 PANTHER PTHR30483:SF11 39 391 3.8E-77 T 22-04-2016 RMET_RS17620 edaf1125a7229b57e9483fe250a6affc 292 Gene3D G3DSA:3.40.630.40 15 289 1.1E-92 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RMET_RS17620 edaf1125a7229b57e9483fe250a6affc 292 SUPERFAMILY SSF53187 15 289 5.34E-82 T 22-04-2016 RMET_RS17620 edaf1125a7229b57e9483fe250a6affc 292 Pfam PF05013 N-formylglutamate amidohydrolase 27 259 4.5E-61 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase RMET_RS08880 5247a9ad54aa7697bef3a77bd2f58491 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 129 3.9E-12 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RMET_RS08880 5247a9ad54aa7697bef3a77bd2f58491 143 PANTHER PTHR36503:SF1 2 139 3.2E-46 T 22-04-2016 RMET_RS08880 5247a9ad54aa7697bef3a77bd2f58491 143 PANTHER PTHR36503 2 139 3.2E-46 T 22-04-2016 RMET_RS08880 5247a9ad54aa7697bef3a77bd2f58491 143 SUPERFAMILY SSF54593 5 139 9.8E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS08880 5247a9ad54aa7697bef3a77bd2f58491 143 Gene3D G3DSA:3.10.180.10 1 134 3.2E-39 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS00115 dff0c68f140c8a59f62e477d80f37fae 288 Gene3D G3DSA:3.90.850.10 68 278 5.0E-86 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS00115 dff0c68f140c8a59f62e477d80f37fae 288 SUPERFAMILY SSF56529 60 278 6.28E-82 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS00115 dff0c68f140c8a59f62e477d80f37fae 288 PANTHER PTHR11820:SF71 1 288 2.2E-157 T 22-04-2016 RMET_RS00115 dff0c68f140c8a59f62e477d80f37fae 288 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 71 276 7.8E-71 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS00115 dff0c68f140c8a59f62e477d80f37fae 288 PANTHER PTHR11820 1 288 2.2E-157 T 22-04-2016 RMET_RS30335 73c008e66e0b0a01b3eb75b55844b3ad 116 Pfam PF07715 TonB-dependent Receptor Plug Domain 20 49 2.0E-5 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS30335 73c008e66e0b0a01b3eb75b55844b3ad 116 PANTHER PTHR30069:SF13 1 116 1.3E-33 T 22-04-2016 RMET_RS30335 73c008e66e0b0a01b3eb75b55844b3ad 116 SUPERFAMILY SSF56935 10 111 1.37E-17 T 22-04-2016 RMET_RS30335 73c008e66e0b0a01b3eb75b55844b3ad 116 PANTHER PTHR30069 1 116 1.3E-33 T 22-04-2016 RMET_RS30335 73c008e66e0b0a01b3eb75b55844b3ad 116 Gene3D G3DSA:2.170.130.10 16 56 1.1E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 Pfam PF03466 LysR substrate binding domain 90 291 6.4E-49 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 Gene3D G3DSA:3.40.190.10 92 176 1.4E-27 T 22-04-2016 RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 SUPERFAMILY SSF46785 4 110 2.72E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 PANTHER PTHR30537:SF5 1 310 1.0E-116 T 22-04-2016 RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 PANTHER PTHR30537 1 310 1.0E-116 T 22-04-2016 RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 Gene3D G3DSA:3.40.190.10 177 260 9.9E-24 T 22-04-2016 RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 Gene3D G3DSA:1.10.10.10 3 84 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.8E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS06995 f53d6233f7a36841aa4573270051c772 319 SUPERFAMILY SSF53850 91 297 8.51E-51 T 22-04-2016 RMET_RS06650 3cbaad039a10f3f396326939796a271a 262 Gene3D G3DSA:3.90.850.10 4 261 1.5E-75 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS06650 3cbaad039a10f3f396326939796a271a 262 TIGRFAM TIGR03218 catechol_dmpH: 4-oxalocrotonate decarboxylase 1 261 2.2E-143 T 22-04-2016 IPR017630 4-oxalocrotonate decarboxylase KEGG: 00362+4.1.1.77|KEGG: 00621+4.1.1.77|KEGG: 00622+4.1.1.77|MetaCyc: PWY-5419|MetaCyc: PWY-5647|MetaCyc: PWY-5654|MetaCyc: PWY-6210|MetaCyc: PWY-6214|MetaCyc: PWY-6336|MetaCyc: PWY-7006|MetaCyc: PWY-7480 RMET_RS06650 3cbaad039a10f3f396326939796a271a 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 104 257 2.0E-5 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS06650 3cbaad039a10f3f396326939796a271a 262 PANTHER PTHR30143 1 262 3.5E-62 T 22-04-2016 RMET_RS06650 3cbaad039a10f3f396326939796a271a 262 SUPERFAMILY SSF56529 3 262 5.76E-72 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS00365 84aa4bb954c154855246c41a68e788dc 314 Pfam PF02470 MlaD protein 45 114 8.9E-14 T 22-04-2016 IPR003399 Mce/MlaD RMET_RS00365 84aa4bb954c154855246c41a68e788dc 314 PANTHER PTHR36698 3 314 7.9E-41 T 22-04-2016 RMET_RS00365 84aa4bb954c154855246c41a68e788dc 314 PANTHER PTHR36698:SF2 3 314 7.9E-41 T 22-04-2016 RMET_RS02050 cbb96a4b85eb25fd5f9f818dbc3987c7 432 PANTHER PTHR12227:SF0 8 431 1.1E-116 T 22-04-2016 RMET_RS02050 cbb96a4b85eb25fd5f9f818dbc3987c7 432 Pfam PF13660 Domain of unknown function (DUF4147) 12 233 2.5E-74 T 22-04-2016 IPR025286 MOFRL-associated domain RMET_RS02050 cbb96a4b85eb25fd5f9f818dbc3987c7 432 Gene3D G3DSA:3.40.1480.10 249 431 1.9E-65 T 22-04-2016 IPR007835 MOFRL domain RMET_RS02050 cbb96a4b85eb25fd5f9f818dbc3987c7 432 SUPERFAMILY SSF82544 6 431 8.63E-137 T 22-04-2016 RMET_RS02050 cbb96a4b85eb25fd5f9f818dbc3987c7 432 Pfam PF05161 MOFRL family 316 425 1.1E-32 T 22-04-2016 IPR007835 MOFRL domain RMET_RS02050 cbb96a4b85eb25fd5f9f818dbc3987c7 432 Gene3D G3DSA:3.40.50.10180 11 248 1.5E-94 T 22-04-2016 RMET_RS02050 cbb96a4b85eb25fd5f9f818dbc3987c7 432 PANTHER PTHR12227 8 431 1.1E-116 T 22-04-2016 RMET_RS04000 c963be373981ecc189263f07583bdac9 307 Pfam PF05726 Pirin C-terminal cupin domain 193 299 2.3E-32 T 22-04-2016 IPR008778 Pirin, C-terminal domain RMET_RS04000 c963be373981ecc189263f07583bdac9 307 Pfam PF02678 Pirin 38 138 6.4E-34 T 22-04-2016 IPR003829 Pirin, N-terminal domain RMET_RS04000 c963be373981ecc189263f07583bdac9 307 PIRSF PIRSF006232 19 307 5.7E-98 T 22-04-2016 IPR012093 Pirin RMET_RS04000 c963be373981ecc189263f07583bdac9 307 Gene3D G3DSA:2.60.120.10 20 272 2.0E-84 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS04000 c963be373981ecc189263f07583bdac9 307 PANTHER PTHR13903:SF8 14 298 3.7E-124 T 22-04-2016 RMET_RS04000 c963be373981ecc189263f07583bdac9 307 SUPERFAMILY SSF51182 22 304 6.57E-89 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS04000 c963be373981ecc189263f07583bdac9 307 PANTHER PTHR13903 14 298 3.7E-124 T 22-04-2016 IPR012093 Pirin RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 Gene3D G3DSA:1.10.10.10 1 85 1.7E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 Gene3D G3DSA:3.40.190.10 175 261 1.3E-16 T 22-04-2016 RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 Pfam PF03466 LysR substrate binding domain 87 294 2.8E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 Gene3D G3DSA:3.40.190.10 89 174 3.7E-20 T 22-04-2016 RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 PANTHER PTHR30346:SF6 1 292 3.1E-81 T 22-04-2016 RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 SUPERFAMILY SSF46785 1 84 1.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 SUPERFAMILY SSF53850 88 295 4.81E-32 T 22-04-2016 RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.7E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 PANTHER PTHR30346 1 292 3.1E-81 T 22-04-2016 RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS12035 39b882eb1623247e37bb6d28480f9dba 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 PANTHER PTHR30562 347 509 4.8E-219 T 22-04-2016 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 PANTHER PTHR30562 31 323 4.8E-219 T 22-04-2016 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 PANTHER PTHR30562 526 672 4.8E-219 T 22-04-2016 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 Gene3D G3DSA:4.10.860.10 205 266 7.7E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 Gene3D G3DSA:3.40.1440.10 41 120 3.6E-7 T 22-04-2016 IPR027299 GIY-YIG domain RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 SMART SM00465 40 121 2.6E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 444 606 8.1E-46 T 22-04-2016 IPR001162 UvrC family homology region RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 Hamap MF_00203 UvrABC system protein C [uvrC]. 27 671 26.484 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 SUPERFAMILY SSF47781 571 673 6.67E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 34 308 3.2E-95 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 Pfam PF02151 UvrB/uvrC motif 227 259 1.6E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 SUPERFAMILY SSF46600 213 265 6.02E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 SUPERFAMILY SSF82771 40 123 2.09E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 PANTHER PTHR30562:SF1 347 509 4.8E-219 T 22-04-2016 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 PANTHER PTHR30562:SF1 31 323 4.8E-219 T 22-04-2016 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 PANTHER PTHR30562:SF1 526 672 4.8E-219 T 22-04-2016 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 Pfam PF14520 Helix-hairpin-helix domain 622 672 8.5E-6 T 22-04-2016 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 Gene3D G3DSA:1.10.150.20 619 673 2.2E-21 T 22-04-2016 RMET_RS12090 b999eba2dff4078425a054000d9d8731 673 Pfam PF01541 GIY-YIG catalytic domain 42 116 1.0E-9 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RMET_RS03280 791f36ec391276de440f5b5de8bf764b 167 Pfam PF01478 Type IV leader peptidase family 15 117 3.0E-15 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RMET_RS16575 bb14ef66159b284554345807fbd51c26 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 44.219 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16575 bb14ef66159b284554345807fbd51c26 180 PIRSF PIRSF002161 1 180 4.1E-62 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 RMET_RS16575 bb14ef66159b284554345807fbd51c26 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 3.2E-39 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal RMET_RS16575 bb14ef66159b284554345807fbd51c26 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16575 bb14ef66159b284554345807fbd51c26 180 SUPERFAMILY SSF55282 4 180 6.36E-77 T 22-04-2016 IPR022803 Ribosomal protein L5 domain RMET_RS16575 bb14ef66159b284554345807fbd51c26 180 PANTHER PTHR11994 1 179 2.2E-88 T 22-04-2016 RMET_RS16575 bb14ef66159b284554345807fbd51c26 180 Pfam PF00281 Ribosomal protein L5 25 81 1.2E-25 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal RMET_RS16575 bb14ef66159b284554345807fbd51c26 180 Gene3D G3DSA:3.30.1440.10 3 180 5.4E-76 T 22-04-2016 IPR022803 Ribosomal protein L5 domain RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 5 72 6.9E-5 T 22-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 PANTHER PTHR34824 1 347 3.4E-93 T 22-04-2016 RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 338 25.999 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 Gene3D G3DSA:3.30.450.40 184 347 4.6E-40 T 22-04-2016 IPR029016 GAF domain-like RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 Pfam PF01628 HrcA protein C terminal domain 113 331 2.5E-56 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 344 6.0E-92 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 SUPERFAMILY SSF46785 1 81 3.69E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 Gene3D G3DSA:1.10.10.10 1 82 1.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 SUPERFAMILY SSF55781 110 347 1.06E-58 T 22-04-2016 IPR029016 GAF domain-like RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 SUPERFAMILY SSF55781 70 83 1.06E-58 T 22-04-2016 IPR029016 GAF domain-like RMET_RS05030 1c229eb136df484a40392c90f8fc5fb2 348 PIRSF PIRSF005485 1 348 5.3E-105 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 Pfam PF03466 LysR substrate binding domain 87 290 5.7E-31 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 Gene3D G3DSA:3.40.190.10 90 175 1.9E-17 T 22-04-2016 RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 Gene3D G3DSA:1.10.10.10 2 85 7.4E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 Gene3D G3DSA:3.40.190.10 176 263 1.7E-16 T 22-04-2016 RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 SUPERFAMILY SSF53850 91 290 6.98E-30 T 22-04-2016 RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 PANTHER PTHR30346 1 306 5.1E-81 T 22-04-2016 RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 SUPERFAMILY SSF46785 2 87 4.23E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS06740 448f2a5d06e0fefe3e00f643f214ba5e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS13770 18ab6d3a6134fc61a72700465cd9c017 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RMET_RS13770 18ab6d3a6134fc61a72700465cd9c017 238 Pfam PF01479 S4 domain 5 42 6.1E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS13770 18ab6d3a6134fc61a72700465cd9c017 238 Gene3D G3DSA:3.10.290.10 5 66 2.5E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS13770 18ab6d3a6134fc61a72700465cd9c017 238 SUPERFAMILY SSF55174 5 90 7.4E-8 T 22-04-2016 RMET_RS13770 18ab6d3a6134fc61a72700465cd9c017 238 Pfam PF00849 RNA pseudouridylate synthase 64 195 1.3E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS13770 18ab6d3a6134fc61a72700465cd9c017 238 PANTHER PTHR21600 5 234 4.7E-50 T 22-04-2016 RMET_RS13770 18ab6d3a6134fc61a72700465cd9c017 238 SUPERFAMILY SSF55120 63 230 7.04E-42 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS13770 18ab6d3a6134fc61a72700465cd9c017 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 226 3.2E-41 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RMET_RS14200 436d8b451fe946f90485310c196af8c2 676 Pfam PF13476 AAA domain 9 61 1.0E-7 T 22-04-2016 RMET_RS14200 436d8b451fe946f90485310c196af8c2 676 Gene3D G3DSA:3.40.50.300 359 376 8.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14200 436d8b451fe946f90485310c196af8c2 676 Gene3D G3DSA:3.40.50.300 414 456 8.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14200 436d8b451fe946f90485310c196af8c2 676 SUPERFAMILY SSF52540 418 610 8.0E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14200 436d8b451fe946f90485310c196af8c2 676 SUPERFAMILY SSF52540 7 230 8.0E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14200 436d8b451fe946f90485310c196af8c2 676 Gene3D G3DSA:3.40.50.300 271 272 5.3E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14200 436d8b451fe946f90485310c196af8c2 676 Gene3D G3DSA:3.40.50.300 529 609 5.3E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14200 436d8b451fe946f90485310c196af8c2 676 Gene3D G3DSA:3.40.50.300 7 214 5.3E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 Pfam PF01794 Ferric reductase like transmembrane component 44 178 6.2E-17 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 PRINTS PR00409 Phthalate dioxygenase reductase family signature 328 347 3.9E-5 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 PRINTS PR00409 Phthalate dioxygenase reductase family signature 412 420 3.9E-5 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 PRINTS PR00409 Phthalate dioxygenase reductase family signature 306 320 3.9E-5 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 Gene3D G3DSA:2.40.30.10 238 310 1.5E-9 T 22-04-2016 RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 SUPERFAMILY SSF63380 238 319 6.27E-14 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 SUPERFAMILY SSF52343 322 444 1.7E-19 T 22-04-2016 RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 PANTHER PTHR11972 35 446 5.4E-46 T 22-04-2016 RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 PANTHER PTHR11972:SF23 35 446 5.4E-46 T 22-04-2016 RMET_RS15120 9f0b2a767308431ff7f26313817e5b63 447 Gene3D G3DSA:3.40.50.80 311 440 6.0E-18 T 22-04-2016 RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 PANTHER PTHR10314:SF3 9 392 8.1E-235 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 PIRSF PIRSF001413 1 397 4.9E-164 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 Gene3D G3DSA:3.40.50.1100 100 179 2.0E-22 T 22-04-2016 RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.705 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 SUPERFAMILY SSF53686 5 391 1.7E-150 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 PANTHER PTHR10314 9 392 8.1E-235 T 22-04-2016 RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 Gene3D G3DSA:3.40.50.1100 180 394 1.9E-97 T 22-04-2016 RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 1.4E-46 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS12380 3a3b9b2ed0891d7cf2a8a7f2f0fff185 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 392 2.2E-193 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 Gene3D G3DSA:3.40.190.10 186 262 7.8E-8 T 22-04-2016 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 PANTHER PTHR30126 1 292 3.7E-50 T 22-04-2016 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 Pfam PF03466 LysR substrate binding domain 87 293 1.9E-24 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 PANTHER PTHR30126:SF32 1 292 3.7E-50 T 22-04-2016 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 Gene3D G3DSA:3.40.190.10 90 185 9.4E-16 T 22-04-2016 RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 SUPERFAMILY SSF46785 1 110 3.02E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 Gene3D G3DSA:1.10.10.10 1 81 1.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10785 fb716500c0e0711f9377a74a2a148868 296 SUPERFAMILY SSF53850 91 292 7.42E-25 T 22-04-2016 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 Gene3D G3DSA:2.40.33.10 76 168 8.1E-25 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 SUPERFAMILY SSF50800 73 168 9.94E-23 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 SUPERFAMILY SSF52935 320 472 6.93E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 Pfam PF00224 Pyruvate kinase, barrel domain 5 333 5.0E-105 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 PRINTS PR01050 Pyruvate kinase family signature 214 240 8.9E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 PRINTS PR01050 Pyruvate kinase family signature 291 309 8.9E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 PRINTS PR01050 Pyruvate kinase family signature 266 290 8.9E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 PRINTS PR01050 Pyruvate kinase family signature 187 201 8.9E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 PRINTS PR01050 Pyruvate kinase family signature 62 78 8.9E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 PRINTS PR01050 Pyruvate kinase family signature 310 326 8.9E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 PRINTS PR01050 Pyruvate kinase family signature 241 265 8.9E-64 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 Gene3D G3DSA:3.20.20.60 169 323 5.9E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 Gene3D G3DSA:3.20.20.60 5 75 5.9E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 PANTHER PTHR11817 2 472 2.8E-193 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 472 2.5E-145 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 469 1.0E-30 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 Gene3D G3DSA:3.40.1380.20 324 469 2.4E-44 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 SUPERFAMILY SSF51621 157 339 1.33E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS07640 e271fd8a02d9982898cb65a3f62c3482 472 SUPERFAMILY SSF51621 3 77 1.33E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS19810 cca3d154971646c6c5faef488344aba0 118 Gene3D G3DSA:3.20.20.70 1 117 1.2E-24 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS19810 cca3d154971646c6c5faef488344aba0 118 Pfam PF05853 beta-keto acid cleavage enzyme 1 117 3.5E-20 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 RMET_RS11200 a0a2cde12740f001cbfcda389e1646e5 276 PANTHER PTHR32243:SF18 2 276 3.9E-87 T 22-04-2016 RMET_RS11200 a0a2cde12740f001cbfcda389e1646e5 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 266 3.4E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11200 a0a2cde12740f001cbfcda389e1646e5 276 SUPERFAMILY SSF161098 10 275 2.09E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11200 a0a2cde12740f001cbfcda389e1646e5 276 Gene3D G3DSA:1.10.3720.10 10 263 1.3E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11200 a0a2cde12740f001cbfcda389e1646e5 276 PANTHER PTHR32243 2 276 3.9E-87 T 22-04-2016 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 8.6E-44 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 SUPERFAMILY SSF53223 1 121 4.8E-42 T 22-04-2016 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 39.013 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 Gene3D G3DSA:3.40.192.10 7 138 4.5E-53 T 22-04-2016 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 2.5E-83 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.5E-83 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.5E-83 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 2.5E-83 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 2.5E-83 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.5E-83 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.5E-83 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 Gene3D G3DSA:3.40.50.720 139 263 2.8E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06015 65285b7967c783da833a114d4f92848e 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 1.9E-68 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 SUPERFAMILY SSF51735 122 280 2.83E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06015 65285b7967c783da833a114d4f92848e 285 PANTHER PTHR10025 1 280 2.0E-162 T 22-04-2016 RMET_RS06015 65285b7967c783da833a114d4f92848e 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 Gene3D G3DSA:1.10.10.10 12 63 4.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 PANTHER PTHR30154 3 165 4.4E-79 T 22-04-2016 RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 SUPERFAMILY SSF46785 10 70 1.81E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 Gene3D G3DSA:3.30.70.920 64 159 2.4E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 1.3E-19 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 SUPERFAMILY SSF54909 73 158 1.23E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 SMART SM00344 11 120 1.2E-44 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 PANTHER PTHR30154:SF0 3 165 4.4E-79 T 22-04-2016 RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 2.5E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 2.5E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 2.5E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS03725 6738f3e703fc19c1e979a1ece44b4386 169 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 1.3E-19 T 22-04-2016 RMET_RS04435 7615f3ce28f95c8e89085ff3464bcdf4 361 SUPERFAMILY SSF56935 26 361 7.94E-67 T 22-04-2016 RMET_RS04435 7615f3ce28f95c8e89085ff3464bcdf4 361 Pfam PF13609 Gram-negative porin 12 345 1.4E-51 T 22-04-2016 RMET_RS04435 7615f3ce28f95c8e89085ff3464bcdf4 361 Gene3D G3DSA:2.40.160.10 26 361 1.0E-72 T 22-04-2016 IPR023614 Porin domain RMET_RS05595 d1dca47bb3600f9b78059b5e564512a0 617 Pfam PF06276 Ferric iron reductase FhuF-like transporter 406 575 1.6E-37 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain RMET_RS05595 d1dca47bb3600f9b78059b5e564512a0 617 PANTHER PTHR34384 1 593 3.4E-133 T 22-04-2016 RMET_RS05595 d1dca47bb3600f9b78059b5e564512a0 617 Pfam PF04183 IucA / IucC family 143 386 2.1E-63 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RMET_RS05595 d1dca47bb3600f9b78059b5e564512a0 617 PANTHER PTHR34384:SF5 1 593 3.4E-133 T 22-04-2016 RMET_RS10385 8e0928645a2da8d48f21a867d8f24e32 219 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 5.7E-34 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RMET_RS10385 8e0928645a2da8d48f21a867d8f24e32 219 PANTHER PTHR30598 5 164 7.9E-36 T 22-04-2016 RMET_RS10385 8e0928645a2da8d48f21a867d8f24e32 219 Gene3D G3DSA:1.10.3480.10 5 137 2.7E-6 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS10385 8e0928645a2da8d48f21a867d8f24e32 219 Pfam PF02613 Nitrate reductase delta subunit 38 158 6.3E-12 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS10385 8e0928645a2da8d48f21a867d8f24e32 219 PANTHER PTHR30598:SF1 5 164 7.9E-36 T 22-04-2016 RMET_RS10385 8e0928645a2da8d48f21a867d8f24e32 219 SUPERFAMILY SSF89155 3 164 3.4E-32 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS16570 1e621d615c5c47cbca992d8d2f468f77 101 Gene3D G3DSA:4.10.830.10 43 101 7.3E-29 T 22-04-2016 RMET_RS16570 1e621d615c5c47cbca992d8d2f468f77 101 PANTHER PTHR19836 2 101 2.9E-53 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16570 1e621d615c5c47cbca992d8d2f468f77 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.33 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid RMET_RS16570 1e621d615c5c47cbca992d8d2f468f77 101 SUPERFAMILY SSF57716 2 101 3.35E-37 T 22-04-2016 RMET_RS16570 1e621d615c5c47cbca992d8d2f468f77 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.7E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS14385 4656f1b38be4cd78bbd85d225c30691a 163 PANTHER PTHR10516 21 87 8.0E-12 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RMET_RS14385 4656f1b38be4cd78bbd85d225c30691a 163 PANTHER PTHR10516:SF329 21 87 8.0E-12 T 22-04-2016 RMET_RS14385 4656f1b38be4cd78bbd85d225c30691a 163 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 20 126 1.3E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RMET_RS14385 4656f1b38be4cd78bbd85d225c30691a 163 SUPERFAMILY SSF54534 21 162 7.66E-31 T 22-04-2016 RMET_RS14385 4656f1b38be4cd78bbd85d225c30691a 163 Gene3D G3DSA:3.10.50.40 19 95 1.6E-17 T 22-04-2016 RMET_RS14385 4656f1b38be4cd78bbd85d225c30691a 163 Gene3D G3DSA:3.10.50.40 149 162 1.6E-17 T 22-04-2016 RMET_RS16980 be8928e0f0d9f003f86627cd8f66c5fd 199 Pfam PF13202 EF hand 146 163 2.1E-4 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RMET_RS16980 be8928e0f0d9f003f86627cd8f66c5fd 199 Pfam PF13202 EF hand 60 78 2.9E-4 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RMET_RS16980 be8928e0f0d9f003f86627cd8f66c5fd 199 Pfam PF13499 EF-hand domain pair 79 139 1.3E-10 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RMET_RS16980 be8928e0f0d9f003f86627cd8f66c5fd 199 SUPERFAMILY SSF47473 61 170 4.55E-23 T 22-04-2016 IPR011992 EF-hand domain pair RMET_RS16980 be8928e0f0d9f003f86627cd8f66c5fd 199 SMART SM00054 75 103 3.4E-4 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RMET_RS16980 be8928e0f0d9f003f86627cd8f66c5fd 199 SMART SM00054 146 169 63.0 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RMET_RS16980 be8928e0f0d9f003f86627cd8f66c5fd 199 SMART SM00054 114 142 0.0058 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RMET_RS16980 be8928e0f0d9f003f86627cd8f66c5fd 199 Gene3D G3DSA:1.10.238.10 61 173 1.5E-20 T 22-04-2016 IPR011992 EF-hand domain pair RMET_RS10970 ef17f13c56c85555c1d9431c409678a2 343 PIRSF PIRSF002756 3 335 1.3E-109 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RMET_RS10970 ef17f13c56c85555c1d9431c409678a2 343 Gene3D G3DSA:3.40.190.10 23 174 4.6E-56 T 22-04-2016 RMET_RS10970 ef17f13c56c85555c1d9431c409678a2 343 Gene3D G3DSA:3.40.190.10 177 334 1.2E-32 T 22-04-2016 RMET_RS10970 ef17f13c56c85555c1d9431c409678a2 343 SUPERFAMILY SSF53850 24 332 2.23E-98 T 22-04-2016 RMET_RS10970 ef17f13c56c85555c1d9431c409678a2 343 PANTHER PTHR30570:SF0 1 332 4.5E-137 T 22-04-2016 RMET_RS10970 ef17f13c56c85555c1d9431c409678a2 343 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 332 1.2E-127 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RMET_RS10970 ef17f13c56c85555c1d9431c409678a2 343 PANTHER PTHR30570 1 332 4.5E-137 T 22-04-2016 RMET_RS10970 ef17f13c56c85555c1d9431c409678a2 343 Pfam PF12849 PBP superfamily domain 22 304 4.5E-62 T 22-04-2016 IPR024370 PBP domain RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 SUPERFAMILY SSF48208 6 370 3.51E-103 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 Gene3D G3DSA:1.50.10.10 16 373 1.5E-90 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 PRINTS PR00735 Glycosyl hydrolase family 8 signature 124 142 1.2E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 PRINTS PR00735 Glycosyl hydrolase family 8 signature 58 71 1.2E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 PRINTS PR00735 Glycosyl hydrolase family 8 signature 229 240 1.2E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 PRINTS PR00735 Glycosyl hydrolase family 8 signature 254 263 1.2E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 PRINTS PR00735 Glycosyl hydrolase family 8 signature 350 364 1.2E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 PRINTS PR00735 Glycosyl hydrolase family 8 signature 190 207 1.2E-17 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 124 142 - T 22-04-2016 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RMET_RS11300 2b5c8cb439d7a68efdd9f5fb32811fdc 387 Pfam PF01270 Glycosyl hydrolases family 8 15 361 6.5E-76 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 Pfam PF08448 PAS fold 30 121 1.2E-7 T 22-04-2016 IPR013656 PAS fold-4 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 251 266 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 SMART SM00382 184 329 1.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 SUPERFAMILY SSF55785 20 121 6.11E-11 T 22-04-2016 IPR000014 PAS domain RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 Gene3D G3DSA:3.30.450.20 20 124 6.6E-8 T 22-04-2016 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 Gene3D G3DSA:1.10.8.60 338 408 5.4E-19 T 22-04-2016 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 188 201 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 SUPERFAMILY SSF52540 164 407 5.99E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 Pfam PF02954 Bacterial regulatory protein, Fis family 471 509 3.2E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 PANTHER PTHR32071:SF22 11 510 4.8E-168 T 22-04-2016 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 PANTHER PTHR32071 11 510 4.8E-168 T 22-04-2016 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 378 387 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 SUPERFAMILY SSF46689 461 509 4.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 SUPERFAMILY SSF46689 378 421 4.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 Gene3D G3DSA:3.40.50.300 161 337 6.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 Pfam PF00158 Sigma-54 interaction domain 165 332 8.1E-61 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS02770 eb9aa70ad43d74539117f563b33c5240 514 Gene3D G3DSA:1.10.10.60 469 509 4.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS11870 a7a1146cd48e85cd0a260cfe26e7088b 331 Pfam PF12833 Helix-turn-helix domain 245 320 5.6E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS11870 a7a1146cd48e85cd0a260cfe26e7088b 331 Gene3D G3DSA:1.10.10.60 272 322 1.0E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS11870 a7a1146cd48e85cd0a260cfe26e7088b 331 SMART SM00342 237 319 6.9E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS11870 a7a1146cd48e85cd0a260cfe26e7088b 331 PANTHER PTHR11019:SF52 134 327 3.7E-32 T 22-04-2016 RMET_RS11870 a7a1146cd48e85cd0a260cfe26e7088b 331 SUPERFAMILY SSF46689 272 321 7.62E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS11870 a7a1146cd48e85cd0a260cfe26e7088b 331 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 17 192 2.6E-29 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RMET_RS11870 a7a1146cd48e85cd0a260cfe26e7088b 331 PANTHER PTHR11019 134 327 3.7E-32 T 22-04-2016 RMET_RS05955 7979022200607735f344a9e732756599 173 Gene3D G3DSA:1.10.10.10 6 139 9.6E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05955 7979022200607735f344a9e732756599 173 SUPERFAMILY SSF46785 8 138 2.58E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13970 c1602445a7af029bc835ba5ddf111098 195 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 190 3.3E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS13970 c1602445a7af029bc835ba5ddf111098 195 PANTHER PTHR23029 35 163 1.8E-22 T 22-04-2016 RMET_RS13970 c1602445a7af029bc835ba5ddf111098 195 Gene3D G3DSA:3.40.50.1240 1 191 2.5E-33 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RMET_RS13970 c1602445a7af029bc835ba5ddf111098 195 SMART SM00855 2 152 4.0E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS13970 c1602445a7af029bc835ba5ddf111098 195 SUPERFAMILY SSF53254 1 191 1.22E-35 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RMET_RS06335 5d53f30b2aee89c7685de51b56ab2436 177 Pfam PF11000 Protein of unknown function (DUF2840) 28 174 2.1E-63 T 22-04-2016 IPR021263 Protein of unknown function DUF2840 RMET_RS05075 f7c615064d31e664715440ea77ae5429 195 PANTHER PTHR23026 1 191 5.6E-76 T 22-04-2016 RMET_RS05075 f7c615064d31e664715440ea77ae5429 195 SUPERFAMILY SSF55469 11 194 6.15E-41 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RMET_RS05075 f7c615064d31e664715440ea77ae5429 195 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 195 44.884 T 22-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 RMET_RS05075 f7c615064d31e664715440ea77ae5429 195 Pfam PF00881 Nitroreductase family 17 173 1.2E-13 T 22-04-2016 IPR029479 Nitroreductase RMET_RS05075 f7c615064d31e664715440ea77ae5429 195 PANTHER PTHR23026:SF110 1 191 5.6E-76 T 22-04-2016 RMET_RS05075 f7c615064d31e664715440ea77ae5429 195 Gene3D G3DSA:3.40.109.10 3 193 1.6E-38 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RMET_RS08670 17723635af266b3279495e5e99d81950 352 PANTHER PTHR37418 131 322 2.0E-29 T 22-04-2016 RMET_RS08670 17723635af266b3279495e5e99d81950 352 PANTHER PTHR37418 13 99 2.0E-29 T 22-04-2016 RMET_RS08670 17723635af266b3279495e5e99d81950 352 Pfam PF05853 beta-keto acid cleavage enzyme 15 318 1.3E-63 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 RMET_RS08670 17723635af266b3279495e5e99d81950 352 PANTHER PTHR37418:SF2 131 322 2.0E-29 T 22-04-2016 RMET_RS08670 17723635af266b3279495e5e99d81950 352 PANTHER PTHR37418:SF2 13 99 2.0E-29 T 22-04-2016 RMET_RS08670 17723635af266b3279495e5e99d81950 352 Gene3D G3DSA:3.20.20.70 13 320 8.2E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS06775 a45cbcac4d9630fcba147089dfcab0ec 819 Gene3D G3DSA:3.40.50.300 405 507 6.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06775 a45cbcac4d9630fcba147089dfcab0ec 819 Gene3D G3DSA:3.40.50.300 603 718 6.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06775 a45cbcac4d9630fcba147089dfcab0ec 819 SMART SM00382 440 704 2.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06775 a45cbcac4d9630fcba147089dfcab0ec 819 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 181 388 5.9E-14 T 22-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 RMET_RS06775 a45cbcac4d9630fcba147089dfcab0ec 819 SUPERFAMILY SSF52540 398 740 2.58E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13705 5774e82df1e2198683fb3d1780417ce8 419 PANTHER PTHR30250 6 416 3.0E-29 T 22-04-2016 RMET_RS13705 5774e82df1e2198683fb3d1780417ce8 419 PANTHER PTHR30250:SF0 6 416 3.0E-29 T 22-04-2016 RMET_RS13705 5774e82df1e2198683fb3d1780417ce8 419 Pfam PF13440 Polysaccharide biosynthesis protein 34 320 2.0E-13 T 22-04-2016 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.7E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 Gene3D G3DSA:3.40.190.10 82 211 2.4E-5 T 22-04-2016 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 Pfam PF03466 LysR substrate binding domain 89 275 8.7E-20 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 SUPERFAMILY SSF53850 91 271 6.88E-21 T 22-04-2016 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 SUPERFAMILY SSF46785 1 86 4.59E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 PANTHER PTHR30126:SF2 1 285 3.0E-82 T 22-04-2016 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 PANTHER PTHR30126 1 285 3.0E-82 T 22-04-2016 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 Gene3D G3DSA:3.40.190.10 212 264 3.6E-7 T 22-04-2016 RMET_RS02010 965c989c6244efa0a757148b860fdbec 314 Gene3D G3DSA:1.10.10.10 1 81 4.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 SUPERFAMILY SSF56317 13 297 1.7E-46 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 Pfam PF00795 Carbon-nitrogen hydrolase 22 282 2.6E-14 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 Pfam PF02540 NAD synthase 350 525 1.4E-24 T 22-04-2016 IPR022310 NAD/GMP synthase RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 Gene3D G3DSA:3.60.110.10 15 297 3.2E-49 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 Gene3D G3DSA:3.40.50.620 628 657 1.4E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 Gene3D G3DSA:3.40.50.620 331 588 1.4E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 PIRSF PIRSF006630 11 678 1.5E-152 T 22-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 SUPERFAMILY SSF52402 625 657 7.94E-63 T 22-04-2016 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 SUPERFAMILY SSF52402 329 585 7.94E-63 T 22-04-2016 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 PANTHER PTHR23090:SF9 622 678 6.6E-168 T 22-04-2016 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 PANTHER PTHR23090:SF9 11 606 6.6E-168 T 22-04-2016 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 PANTHER PTHR23090 622 678 6.6E-168 T 22-04-2016 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 PANTHER PTHR23090 11 606 6.6E-168 T 22-04-2016 RMET_RS03430 bc6a52b7b302b04db67438b399074ff9 687 TIGRFAM TIGR00552 nadE: NAD+ synthetase 353 525 1.3E-20 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 RMET_RS09395 b6affea87bd584488fc3286776e0755a 436 PANTHER PTHR33362 8 431 3.9E-117 T 22-04-2016 RMET_RS09395 b6affea87bd584488fc3286776e0755a 436 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 421 3.7E-76 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RMET_RS09395 b6affea87bd584488fc3286776e0755a 436 PIRSF PIRSF006066 5 433 3.3E-82 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RMET_RS09395 b6affea87bd584488fc3286776e0755a 436 PANTHER PTHR33362:SF5 8 431 3.9E-117 T 22-04-2016 RMET_RS09395 b6affea87bd584488fc3286776e0755a 436 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 427 3.4E-100 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 Gene3D G3DSA:1.10.390.10 310 457 1.9E-31 T 22-04-2016 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 296 311 5.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 178 193 5.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 128 143 5.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 315 327 5.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 260 270 5.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 SUPERFAMILY SSF63737 10 194 3.92E-44 T 22-04-2016 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 895 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 Pfam PF01433 Peptidase family M1 23 390 6.9E-64 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PANTHER PTHR11533 3 603 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PANTHER PTHR11533 627 895 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 Gene3D G3DSA:1.25.50.10 564 895 1.9E-137 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PANTHER PTHR11533:SF152 3 603 0.0 T 22-04-2016 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 PANTHER PTHR11533:SF152 627 895 0.0 T 22-04-2016 RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 Pfam PF11940 Domain of unknown function (DUF3458) 465 853 1.2E-150 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RMET_RS04415 80c7c6e3eb49956b29cc652eef587df7 897 SUPERFAMILY SSF55486 209 456 2.2E-75 T 22-04-2016 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 Gene3D G3DSA:3.40.47.10 2 168 2.0E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 PANTHER PTHR18919 33 326 1.3E-135 T 22-04-2016 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 326 71.417 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 326 4.9E-127 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 Gene3D G3DSA:3.40.47.10 169 325 7.5E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 SUPERFAMILY SSF53901 4 326 4.39E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 191 4.6E-35 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 PANTHER PTHR18919:SF109 33 326 1.3E-135 T 22-04-2016 RMET_RS12190 3a77f39d74f9aee0f002064d0de87d39 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 326 1.5E-36 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RMET_RS14485 630d6f6dab2d604e4486442016294b3c 281 PANTHER PTHR40265 1 281 2.8E-14 T 22-04-2016 RMET_RS14485 630d6f6dab2d604e4486442016294b3c 281 Gene3D G3DSA:3.10.180.10 165 257 2.7E-4 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS14485 630d6f6dab2d604e4486442016294b3c 281 SUPERFAMILY SSF54593 8 258 7.3E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS14485 630d6f6dab2d604e4486442016294b3c 281 Pfam PF13468 Glyoxalase-like domain 8 184 1.0E-36 T 22-04-2016 IPR025870 Glyoxalase-like domain RMET_RS14485 630d6f6dab2d604e4486442016294b3c 281 PANTHER PTHR40265:SF1 1 281 2.8E-14 T 22-04-2016 RMET_RS14485 630d6f6dab2d604e4486442016294b3c 281 Gene3D G3DSA:3.10.180.10 8 111 3.6E-8 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS01110 7dc15061ba84c197ced0329334d87408 445 PANTHER PTHR30483 1 440 3.0E-14 T 22-04-2016 RMET_RS01110 7dc15061ba84c197ced0329334d87408 445 Gene3D G3DSA:3.40.50.2300 161 291 3.3E-16 T 22-04-2016 RMET_RS01110 7dc15061ba84c197ced0329334d87408 445 Gene3D G3DSA:3.40.50.2300 43 160 9.2E-8 T 22-04-2016 RMET_RS01110 7dc15061ba84c197ced0329334d87408 445 Gene3D G3DSA:3.40.50.2300 339 373 9.2E-8 T 22-04-2016 RMET_RS01110 7dc15061ba84c197ced0329334d87408 445 Pfam PF13458 Periplasmic binding protein 36 405 5.6E-71 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS01110 7dc15061ba84c197ced0329334d87408 445 SUPERFAMILY SSF53822 43 411 3.36E-49 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS01900 4b1f5c3032784ed079fb03e886743c02 478 Pfam PF00474 Sodium:solute symporter family 30 426 1.9E-35 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS01900 4b1f5c3032784ed079fb03e886743c02 478 PANTHER PTHR11819 1 462 4.3E-93 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS01900 4b1f5c3032784ed079fb03e886743c02 478 PANTHER PTHR11819:SF141 1 462 4.3E-93 T 22-04-2016 RMET_RS06915 47005f16ce365d29a87d445588529665 268 PANTHER PTHR30151 15 265 3.0E-153 T 22-04-2016 RMET_RS06915 47005f16ce365d29a87d445588529665 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 257 2.9E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06915 47005f16ce365d29a87d445588529665 268 PANTHER PTHR30151:SF22 15 265 3.0E-153 T 22-04-2016 RMET_RS06915 47005f16ce365d29a87d445588529665 268 SUPERFAMILY SSF161098 65 248 2.35E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06915 47005f16ce365d29a87d445588529665 268 Gene3D G3DSA:1.10.3720.10 63 258 1.6E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02690 0fec10e66c47514fd327226374033937 221 SUPERFAMILY SSF52540 1 186 2.72E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02690 0fec10e66c47514fd327226374033937 221 Pfam PF05191 Adenylate kinase, active site lid 123 158 6.9E-16 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 Pfam PF00406 Adenylate kinase 5 185 3.2E-58 T 22-04-2016 RMET_RS02690 0fec10e66c47514fd327226374033937 221 PRINTS PR00094 Adenylate kinase signature 156 171 8.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 PRINTS PR00094 Adenylate kinase signature 4 17 8.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 PRINTS PR00094 Adenylate kinase signature 32 46 8.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 PRINTS PR00094 Adenylate kinase signature 81 97 8.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 PRINTS PR00094 Adenylate kinase signature 173 187 8.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 Gene3D G3DSA:3.40.50.300 1 218 1.2E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02690 0fec10e66c47514fd327226374033937 221 TIGRFAM TIGR01351 adk: adenylate kinase 2 187 4.1E-74 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 Hamap MF_00235 Adenylate kinase [adk]. 1 221 52.066 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS02690 0fec10e66c47514fd327226374033937 221 PANTHER PTHR23359 1 220 8.2E-106 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 Gene3D G3DSA:1.20.120.530 88 226 9.5E-33 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 85 2.9E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 SUPERFAMILY SSF48008 91 226 1.57E-29 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 Pfam PF07729 FCD domain 95 218 8.9E-29 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 SUPERFAMILY SSF46785 19 89 2.55E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 Gene3D G3DSA:1.10.10.10 11 87 2.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 PANTHER PTHR11751 22 111 5.6E-23 T 22-04-2016 RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 SMART SM00895 95 219 2.9E-21 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS09670 73a6f7302ac99f317fc20da8d49d5df0 228 SMART SM00345 27 85 8.8E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS02930 01bde992452d3010446b3da9e15f262b 263 PANTHER PTHR30462:SF1 73 248 3.1E-51 T 22-04-2016 RMET_RS02930 01bde992452d3010446b3da9e15f262b 263 Pfam PF04403 Paraquat-inducible protein A 88 244 5.8E-50 T 22-04-2016 IPR007498 Paraquat-inducible protein A RMET_RS02930 01bde992452d3010446b3da9e15f262b 263 PANTHER PTHR30462 73 248 3.1E-51 T 22-04-2016 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 PANTHER PTHR11638:SF18 1 470 8.0E-284 T 22-04-2016 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 Gene3D G3DSA:1.10.8.60 28 113 4.8E-37 T 22-04-2016 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 SUPERFAMILY SSF52540 235 469 3.16E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 320 338 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 SUPERFAMILY SSF52540 3 234 1.25E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 Pfam PF07724 AAA domain (Cdc48 subfamily) 286 448 3.4E-55 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 335 353 7.9E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 397 411 7.9E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 290 308 7.9E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 364 382 7.9E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 PANTHER PTHR11638 1 470 8.0E-284 T 22-04-2016 RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 SMART SM00382 286 428 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS27635 d59a4ae23874a24c56ed78bf7e2b1e2b 470 Gene3D G3DSA:3.40.50.300 239 469 7.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12175 ae2d60497ec9a127e656353e9e5f1448 79 Gene3D G3DSA:1.10.1200.10 3 77 2.6E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RMET_RS12175 ae2d60497ec9a127e656353e9e5f1448 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 9.0E-13 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RMET_RS12175 ae2d60497ec9a127e656353e9e5f1448 79 SUPERFAMILY SSF47336 2 77 1.7E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RMET_RS12175 ae2d60497ec9a127e656353e9e5f1448 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.26 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RMET_RS12175 ae2d60497ec9a127e656353e9e5f1448 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 74 1.4E-35 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RMET_RS12175 ae2d60497ec9a127e656353e9e5f1448 79 PANTHER PTHR20863 4 73 4.5E-30 T 22-04-2016 RMET_RS12175 ae2d60497ec9a127e656353e9e5f1448 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site RMET_RS12175 ae2d60497ec9a127e656353e9e5f1448 79 Pfam PF00550 Phosphopantetheine attachment site 6 72 5.2E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RMET_RS09160 90e390f43447c7addeb2ee7b7dc94184 336 SUPERFAMILY SSF103025 6 247 5.02E-59 T 22-04-2016 RMET_RS09160 90e390f43447c7addeb2ee7b7dc94184 336 Pfam PF01571 Aminomethyltransferase folate-binding domain 28 183 1.1E-10 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RMET_RS09160 90e390f43447c7addeb2ee7b7dc94184 336 PANTHER PTHR22602 29 273 9.0E-44 T 22-04-2016 RMET_RS09160 90e390f43447c7addeb2ee7b7dc94184 336 Gene3D G3DSA:3.30.70.1400 29 113 9.4E-28 T 22-04-2016 RMET_RS09160 90e390f43447c7addeb2ee7b7dc94184 336 PANTHER PTHR22602:SF0 29 273 9.0E-44 T 22-04-2016 RMET_RS09160 90e390f43447c7addeb2ee7b7dc94184 336 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 193 256 4.9E-27 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site RMET_RS13985 bea63079aee0217e3163b23c511c6faa 209 Gene3D G3DSA:3.40.50.300 14 209 9.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13985 bea63079aee0217e3163b23c511c6faa 209 SUPERFAMILY SSF52540 18 208 2.39E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13985 bea63079aee0217e3163b23c511c6faa 209 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 35 208 1.1E-68 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RMET_RS13985 bea63079aee0217e3163b23c511c6faa 209 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 39 208 8.1E-57 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RMET_RS13985 bea63079aee0217e3163b23c511c6faa 209 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 11 32 7.1E-9 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RMET_RS13985 bea63079aee0217e3163b23c511c6faa 209 PIRSF PIRSF015617 12 209 5.1E-69 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RMET_RS13985 bea63079aee0217e3163b23c511c6faa 209 PANTHER PTHR30069 11 208 1.6E-60 T 22-04-2016 RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 SUPERFAMILY SSF51338 3 55 2.43E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 SUPERFAMILY SSF51338 345 381 2.43E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 PANTHER PTHR11271 9 356 3.4E-31 T 22-04-2016 RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 Pfam PF01979 Amidohydrolase family 52 377 8.7E-12 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 SUPERFAMILY SSF51556 55 180 1.9E-17 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 SUPERFAMILY SSF51556 217 343 1.9E-17 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 PIRSF PIRSF038971 2 378 1.2E-106 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 Gene3D G3DSA:2.30.40.10 290 379 1.7E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 Gene3D G3DSA:2.30.40.10 5 62 2.5E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RMET_RS03815 2b258b8e546e1f1b42c9f7c8916bd11e 399 PANTHER PTHR11271:SF43 9 356 3.4E-31 T 22-04-2016 RMET_RS01035 4f08ff6ca84019d021138b6ed0b56473 195 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 77 194 3.6E-26 T 22-04-2016 IPR018550 Lipid A 3-O-deacylase-related RMET_RS01035 4f08ff6ca84019d021138b6ed0b56473 195 Gene3D G3DSA:2.40.160.20 49 195 3.3E-43 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS01035 4f08ff6ca84019d021138b6ed0b56473 195 SUPERFAMILY SSF56925 71 195 2.41E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS01035 4f08ff6ca84019d021138b6ed0b56473 195 PIRSF PIRSF029681 2 195 3.0E-70 T 22-04-2016 IPR018550 Lipid A 3-O-deacylase-related RMET_RS00130 516ec1e9b60753a0a30ebeae5a04d846 404 SUPERFAMILY SSF103473 8 396 2.75E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS00130 516ec1e9b60753a0a30ebeae5a04d846 404 Gene3D G3DSA:1.20.1250.20 222 394 3.6E-21 T 22-04-2016 RMET_RS00130 516ec1e9b60753a0a30ebeae5a04d846 404 PANTHER PTHR23505:SF8 3 402 2.2E-148 T 22-04-2016 RMET_RS00130 516ec1e9b60753a0a30ebeae5a04d846 404 PANTHER PTHR23505 3 402 2.2E-148 T 22-04-2016 RMET_RS00130 516ec1e9b60753a0a30ebeae5a04d846 404 Pfam PF07690 Major Facilitator Superfamily 25 262 1.2E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS00130 516ec1e9b60753a0a30ebeae5a04d846 404 Gene3D G3DSA:1.20.1250.20 18 188 3.5E-21 T 22-04-2016 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 SUPERFAMILY SSF63380 693 902 6.27E-56 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 403 412 - T 22-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Gene3D G3DSA:1.20.990.10 708 842 6.8E-28 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Pfam PF00667 FAD binding domain 699 885 3.6E-37 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 946 955 2.6E-27 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 917 936 2.6E-27 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 989 1005 2.6E-27 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 845 852 2.6E-27 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 880 889 2.6E-27 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 708 718 2.6E-27 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 959 970 2.6E-27 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1012 1020 2.6E-27 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PANTHER PTHR19384 401 1064 1.5E-166 T 22-04-2016 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Pfam PF00067 Cytochrome P450 15 446 1.2E-88 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Gene3D G3DSA:2.40.30.10 693 707 3.8E-21 T 22-04-2016 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Gene3D G3DSA:2.40.30.10 843 916 3.8E-21 T 22-04-2016 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Pfam PF00258 Flavodoxin 493 626 7.5E-18 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Gene3D G3DSA:3.40.50.80 917 1063 6.0E-49 T 22-04-2016 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PANTHER PTHR19384:SF17 401 1064 1.5E-166 T 22-04-2016 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Pfam PF00175 Oxidoreductase NAD-binding domain 918 1027 3.6E-13 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Gene3D G3DSA:3.40.50.360 490 635 5.1E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 SUPERFAMILY SSF48264 11 461 2.49E-109 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 SUPERFAMILY SSF52343 906 1063 8.25E-43 T 22-04-2016 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 Gene3D G3DSA:1.10.630.10 11 469 3.8E-117 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 SUPERFAMILY SSF52218 491 634 1.84E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS17420 acdb6d61df69591a4c4ba6f685af6d1f 1064 PIRSF PIRSF000209 7 1064 0.0 T 22-04-2016 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 SUPERFAMILY SSF81464 32 125 7.85E-27 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 Gene3D G3DSA:1.10.287.90 36 121 3.4E-25 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 202 250 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 SUPERFAMILY SSF46626 236 369 1.55E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 291 359 1.4E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PANTHER PTHR22888 37 277 1.9E-99 T 22-04-2016 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 44 266 1.5E-58 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 SUPERFAMILY SSF49503 128 271 2.63E-51 T 22-04-2016 IPR008972 Cupredoxin RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 Gene3D G3DSA:1.10.760.10 298 371 2.4E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PANTHER PTHR22888:SF2 37 277 1.9E-99 T 22-04-2016 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 Gene3D G3DSA:2.60.40.420 122 297 8.5E-56 T 22-04-2016 IPR008972 Cupredoxin RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 131 257 3.2E-39 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 36 116 7.0E-14 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PRINTS PR01166 Cytochrome c oxidase subunit II signature 239 256 4.1E-39 T 22-04-2016 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 105 4.1E-39 T 22-04-2016 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PRINTS PR01166 Cytochrome c oxidase subunit II signature 221 238 4.1E-39 T 22-04-2016 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 125 4.1E-39 T 22-04-2016 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PRINTS PR01166 Cytochrome c oxidase subunit II signature 177 198 4.1E-39 T 22-04-2016 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PRINTS PR01166 Cytochrome c oxidase subunit II signature 201 221 4.1E-39 T 22-04-2016 RMET_RS01330 f61b0aec8eaf3d2763a005c812c64f1f 422 PRINTS PR01166 Cytochrome c oxidase subunit II signature 127 146 4.1E-39 T 22-04-2016 RMET_RS05355 323a1defa9d18cbb9169ad9790b0db3e 215 SUPERFAMILY SSF55821 1 204 7.94E-63 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RMET_RS05355 323a1defa9d18cbb9169ad9790b0db3e 215 PANTHER PTHR17490 1 205 1.8E-82 T 22-04-2016 RMET_RS05355 323a1defa9d18cbb9169ad9790b0db3e 215 Gene3D G3DSA:3.90.870.10 2 204 7.3E-63 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RMET_RS05355 323a1defa9d18cbb9169ad9790b0db3e 215 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 1.9E-58 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RMET_RS05355 323a1defa9d18cbb9169ad9790b0db3e 215 Pfam PF01300 Telomere recombination 23 198 1.1E-43 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RMET_RS05355 323a1defa9d18cbb9169ad9790b0db3e 215 PANTHER PTHR17490:SF7 1 205 1.8E-82 T 22-04-2016 RMET_RS08085 7fe133b442d8f7c82a82c2414a3e556f 241 PANTHER PTHR30249 15 230 1.3E-82 T 22-04-2016 RMET_RS08085 7fe133b442d8f7c82a82c2414a3e556f 241 PANTHER PTHR30249:SF4 15 230 1.3E-82 T 22-04-2016 RMET_RS08085 7fe133b442d8f7c82a82c2414a3e556f 241 Pfam PF04172 LrgB-like family 22 233 2.3E-66 T 22-04-2016 IPR007300 CidB/LrgB family RMET_RS04825 af67da9422bc7c5821d33254af5952ca 211 PIRSF PIRSF016919 4 211 5.0E-50 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RMET_RS04825 af67da9422bc7c5821d33254af5952ca 211 Pfam PF04955 HupE / UreJ protein 14 208 5.1E-61 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 7.3E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 7.3E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PRINTS PR00834 HtrA/DegQ protease family signature 187 211 7.3E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PRINTS PR00834 HtrA/DegQ protease family signature 330 342 7.3E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 7.3E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 7.3E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 384 8.2E-133 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PANTHER PTHR22939:SF93 62 92 6.0E-137 T 22-04-2016 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PANTHER PTHR22939:SF93 108 385 6.0E-137 T 22-04-2016 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 Gene3D G3DSA:2.40.10.10 61 178 6.5E-39 T 22-04-2016 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 Gene3D G3DSA:2.40.10.10 179 291 3.6E-43 T 22-04-2016 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 SUPERFAMILY SSF50494 62 286 1.15E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 Gene3D G3DSA:2.30.42.10 292 386 3.9E-31 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 SUPERFAMILY SSF50156 249 373 5.92E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 SMART SM00228 290 372 5.0E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PANTHER PTHR22939 62 92 6.0E-137 T 22-04-2016 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 PANTHER PTHR22939 108 385 6.0E-137 T 22-04-2016 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 Pfam PF13365 Trypsin-like peptidase domain 117 251 9.6E-35 T 22-04-2016 RMET_RS16215 6602a12056a10d1fabd771900d62fbea 398 Pfam PF13180 PDZ domain 290 380 4.4E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 Pfam PF00162 Phosphoglycerate kinase 14 384 1.0E-138 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 SUPERFAMILY SSF53748 11 394 1.53E-141 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 370 387 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 37 59 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 2.9E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PIRSF PIRSF000724 3 397 1.6E-139 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 Gene3D G3DSA:3.40.50.1270 181 382 8.4E-82 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 Gene3D G3DSA:3.40.50.1260 11 180 6.6E-64 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 394 39.068 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS02535 fea605d9e1a3255759f864eda4bfcabb 398 PANTHER PTHR11406 1 397 6.0E-188 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RMET_RS10920 3dc05199554a83b1217a5d4a23e1ff1b 158 SMART SM00855 2 114 4.8E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS10920 3dc05199554a83b1217a5d4a23e1ff1b 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 74 1.3E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RMET_RS10920 3dc05199554a83b1217a5d4a23e1ff1b 158 Gene3D G3DSA:3.40.50.1240 1 156 1.6E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RMET_RS10920 3dc05199554a83b1217a5d4a23e1ff1b 158 SUPERFAMILY SSF53254 2 142 9.75E-22 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 PANTHER PTHR10366:SF256 459 580 5.7E-111 T 22-04-2016 RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 PANTHER PTHR10366 459 580 5.7E-111 T 22-04-2016 RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 SUPERFAMILY SSF51735 284 575 5.16E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 Gene3D G3DSA:3.90.25.10 488 571 7.5E-8 T 22-04-2016 RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 Pfam PF13727 CoA-binding domain 83 242 2.3E-7 T 22-04-2016 RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 Gene3D G3DSA:3.40.50.720 145 232 8.0E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 PANTHER PTHR10366 286 441 5.7E-111 T 22-04-2016 RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 Pfam PF02719 Polysaccharide biosynthesis protein 287 596 6.3E-120 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 Gene3D G3DSA:3.40.50.720 285 487 6.0E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 PANTHER PTHR10366:SF256 286 441 5.7E-111 T 22-04-2016 RMET_RS13675 c17b77f34342d065fd390a82e0108857 649 SUPERFAMILY SSF51735 149 274 4.72E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 SUPERFAMILY SSF52172 1 170 1.71E-39 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 SMART SM00448 1 112 2.2E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 Gene3D G3DSA:3.40.50.2300 1 124 2.1E-38 T 22-04-2016 RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 PANTHER PTHR26402:SF316 1 219 1.1E-74 T 22-04-2016 RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 Gene3D G3DSA:1.10.10.10 125 219 1.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 7.6E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 SMART SM00862 145 218 9.3E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS08185 e89dae6a4493dbbefa7935ca3b3ae685 230 PANTHER PTHR26402 1 219 1.1E-74 T 22-04-2016 RMET_RS05570 f425afcf08eee21ab800deabbc1ee410 120 Pfam PF11804 Protein of unknown function (DUF3325) 10 106 6.7E-28 T 22-04-2016 IPR021762 Protein of unknown function DUF3325 RMET_RS16995 7f713f1458128295f4141970529c7e92 155 Pfam PF02082 Transcriptional regulator 6 87 5.6E-19 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RMET_RS16995 7f713f1458128295f4141970529c7e92 155 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 6 133 2.6E-28 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RMET_RS16995 7f713f1458128295f4141970529c7e92 155 PANTHER PTHR33221:SF4 7 133 7.6E-45 T 22-04-2016 RMET_RS16995 7f713f1458128295f4141970529c7e92 155 SUPERFAMILY SSF46785 7 136 1.76E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16995 7f713f1458128295f4141970529c7e92 155 PANTHER PTHR33221 7 133 7.6E-45 T 22-04-2016 RMET_RS16995 7f713f1458128295f4141970529c7e92 155 Gene3D G3DSA:1.10.10.10 6 135 4.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08620 87d5390490c06686c2fd79c52f73b83b 252 Pfam PF09339 IclR helix-turn-helix domain 18 70 1.1E-10 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS08620 87d5390490c06686c2fd79c52f73b83b 252 Gene3D G3DSA:3.30.450.40 86 248 1.4E-10 T 22-04-2016 IPR029016 GAF domain-like RMET_RS08620 87d5390490c06686c2fd79c52f73b83b 252 SMART SM00346 16 107 3.7E-17 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS08620 87d5390490c06686c2fd79c52f73b83b 252 SUPERFAMILY SSF46785 16 90 3.49E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08620 87d5390490c06686c2fd79c52f73b83b 252 Gene3D G3DSA:1.10.10.10 13 85 6.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08620 87d5390490c06686c2fd79c52f73b83b 252 PANTHER PTHR30136 15 248 4.5E-22 T 22-04-2016 RMET_RS08620 87d5390490c06686c2fd79c52f73b83b 252 SUPERFAMILY SSF55781 84 248 9.81E-14 T 22-04-2016 IPR029016 GAF domain-like RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 SMART SM01193 4 134 4.9E-96 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 Pfam PF03952 Enolase, N-terminal domain 4 133 2.6E-59 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 Hamap MF_00318 Enolase [eno]. 2 413 44.958 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 Gene3D G3DSA:3.30.390.10 4 126 2.3E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 SMART SM01192 139 427 3.8E-222 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.0E-212 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 SUPERFAMILY SSF51604 139 428 2.12E-130 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 Gene3D G3DSA:3.20.20.120 128 426 2.3E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 PIRSF PIRSF001400 1 427 2.8E-193 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 PANTHER PTHR11902 1 429 1.0E-260 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 SUPERFAMILY SSF54826 3 136 3.7E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 ProSitePatterns PS00164 Enolase signature. 336 349 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 9.7E-135 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 PRINTS PR00148 Enolase signature 161 174 7.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 PRINTS PR00148 Enolase signature 365 382 7.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 PRINTS PR00148 Enolase signature 37 51 7.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 PRINTS PR00148 Enolase signature 107 123 7.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 PRINTS PR00148 Enolase signature 336 350 7.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS05305 f1e1efc5f12187b62235cff4b33696dd 429 PRINTS PR00148 Enolase signature 313 324 7.1E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS03705 de52547098cf15e9f5f68d2a64d1cb65 249 SMART SM00893 23 211 4.9E-69 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RMET_RS03705 de52547098cf15e9f5f68d2a64d1cb65 249 PANTHER PTHR21294 1 249 1.1E-154 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RMET_RS03705 de52547098cf15e9f5f68d2a64d1cb65 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 RMET_RS03705 de52547098cf15e9f5f68d2a64d1cb65 249 Gene3D G3DSA:3.40.50.620 1 247 2.2E-103 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS03705 de52547098cf15e9f5f68d2a64d1cb65 249 PANTHER PTHR21294:SF8 1 249 1.1E-154 T 22-04-2016 RMET_RS03705 de52547098cf15e9f5f68d2a64d1cb65 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 1.6E-45 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RMET_RS03705 de52547098cf15e9f5f68d2a64d1cb65 249 SUPERFAMILY SSF52402 1 242 1.05E-85 T 22-04-2016 RMET_RS03705 de52547098cf15e9f5f68d2a64d1cb65 249 PIRSF PIRSF000090 1 249 2.0E-85 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PANTHER PTHR24322 9 137 2.6E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PANTHER PTHR24322 153 185 2.6E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 SUPERFAMILY SSF51735 3 257 6.12E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 Gene3D G3DSA:3.40.50.720 1 256 1.3E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 258 3.0E-115 T 22-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 RMET_RS05815 55cdb1bf9cae74eeedc5096b1c1b302f 258 Pfam PF00106 short chain dehydrogenase 5 197 2.9E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS09315 78ebe2e4f4e9078d248d61d1f5255ae7 315 PANTHER PTHR11795 8 261 4.8E-68 T 22-04-2016 RMET_RS09315 78ebe2e4f4e9078d248d61d1f5255ae7 315 PANTHER PTHR11795 289 313 4.8E-68 T 22-04-2016 RMET_RS09315 78ebe2e4f4e9078d248d61d1f5255ae7 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 300 3.0E-31 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS09315 78ebe2e4f4e9078d248d61d1f5255ae7 315 PANTHER PTHR11795:SF379 8 261 4.8E-68 T 22-04-2016 RMET_RS09315 78ebe2e4f4e9078d248d61d1f5255ae7 315 PANTHER PTHR11795:SF379 289 313 4.8E-68 T 22-04-2016 RMET_RS06190 219562a7fdfbb092a23c707d77b2ea44 397 SUPERFAMILY SSF53822 38 383 1.52E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS06190 219562a7fdfbb092a23c707d77b2ea44 397 Gene3D G3DSA:3.40.50.2300 161 311 6.3E-26 T 22-04-2016 RMET_RS06190 219562a7fdfbb092a23c707d77b2ea44 397 PANTHER PTHR30483 17 385 3.7E-82 T 22-04-2016 RMET_RS06190 219562a7fdfbb092a23c707d77b2ea44 397 Gene3D G3DSA:3.40.50.2300 312 365 4.6E-44 T 22-04-2016 RMET_RS06190 219562a7fdfbb092a23c707d77b2ea44 397 Gene3D G3DSA:3.40.50.2300 34 160 4.6E-44 T 22-04-2016 RMET_RS06190 219562a7fdfbb092a23c707d77b2ea44 397 Pfam PF13458 Periplasmic binding protein 37 375 1.6E-69 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS06190 219562a7fdfbb092a23c707d77b2ea44 397 PANTHER PTHR30483:SF13 17 385 3.7E-82 T 22-04-2016 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 430 101.331 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 Gene3D G3DSA:3.40.640.10 70 321 3.6E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 Gene3D G3DSA:3.90.1150.10 2 69 2.5E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 Gene3D G3DSA:3.90.1150.10 324 428 2.5E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 Pfam PF00202 Aminotransferase class-III 32 401 7.5E-79 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 428 2.8E-184 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 PANTHER PTHR11986 1 428 1.9E-209 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 SUPERFAMILY SSF53383 2 428 2.59E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS03365 52eacd6d7024a34a3aaa77f04752d50e 430 PANTHER PTHR11986:SF5 1 428 1.9E-209 T 22-04-2016 RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 95 4.0E-22 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 PANTHER PTHR22572 108 308 2.8E-45 T 22-04-2016 RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 343 1.3E-102 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 340 35.781 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 SUPERFAMILY SSF51161 32 330 7.15E-75 T 22-04-2016 IPR011004 Trimeric LpxA-like RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 Gene3D G3DSA:2.160.10.10 104 150 1.7E-10 T 22-04-2016 RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 Gene3D G3DSA:2.160.10.10 151 309 5.2E-36 T 22-04-2016 RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 PANTHER PTHR22572:SF117 108 308 2.8E-45 T 22-04-2016 RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 154 188 4.6E-8 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 152 6.9E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS07280 9086d1f338c90699a83706ba1c0cfc96 369 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 235 266 2.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS08395 75289ea9a063cc4f8fc39f41ee86788f 143 Gene3D G3DSA:3.40.50.620 1 143 3.0E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS08395 75289ea9a063cc4f8fc39f41ee86788f 143 PANTHER PTHR31964 1 143 8.0E-24 T 22-04-2016 RMET_RS08395 75289ea9a063cc4f8fc39f41ee86788f 143 PANTHER PTHR31964:SF45 1 143 8.0E-24 T 22-04-2016 RMET_RS08395 75289ea9a063cc4f8fc39f41ee86788f 143 PRINTS PR01438 Universal stress protein signature 2 20 2.7E-17 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08395 75289ea9a063cc4f8fc39f41ee86788f 143 PRINTS PR01438 Universal stress protein signature 121 143 2.7E-17 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08395 75289ea9a063cc4f8fc39f41ee86788f 143 PRINTS PR01438 Universal stress protein signature 103 115 2.7E-17 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08395 75289ea9a063cc4f8fc39f41ee86788f 143 Pfam PF00582 Universal stress protein family 1 143 7.0E-28 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS08395 75289ea9a063cc4f8fc39f41ee86788f 143 SUPERFAMILY SSF52402 1 143 4.27E-32 T 22-04-2016 RMET_RS01675 83bdc9d4cafe19e0f1198b1d35364c7b 354 PANTHER PTHR10361 16 351 2.7E-113 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 RMET_RS01675 83bdc9d4cafe19e0f1198b1d35364c7b 354 PANTHER PTHR10361:SF31 16 351 2.7E-113 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 RMET_RS01675 83bdc9d4cafe19e0f1198b1d35364c7b 354 PIRSF PIRSF005508 2 354 1.4E-115 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 RMET_RS01675 83bdc9d4cafe19e0f1198b1d35364c7b 354 Pfam PF01758 Sodium Bile acid symporter family 62 256 3.2E-34 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 RMET_RS01675 83bdc9d4cafe19e0f1198b1d35364c7b 354 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 343 1.2E-115 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 SUPERFAMILY SSF55073 434 590 3.69E-39 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 Gene3D G3DSA:3.30.70.270 431 591 2.7E-45 T 22-04-2016 RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 SMART SM00267 418 593 1.4E-47 T 22-04-2016 IPR000160 GGDEF domain RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 PANTHER PTHR10799:SF750 168 318 3.9E-27 T 22-04-2016 RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 PANTHER PTHR10799:SF750 462 590 3.9E-27 T 22-04-2016 RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 591 3.5E-42 T 22-04-2016 IPR000160 GGDEF domain RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 PANTHER PTHR10799 168 318 3.9E-27 T 22-04-2016 RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 PANTHER PTHR10799 462 590 3.9E-27 T 22-04-2016 RMET_RS16170 789f87593790f490e9a198ad5d4be38f 599 Pfam PF00990 Diguanylate cyclase, GGDEF domain 429 589 1.1E-36 T 22-04-2016 IPR000160 GGDEF domain RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 SUPERFAMILY SSF54752 278 335 4.58E-23 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 PRINTS PR00142 RecA protein signature 137 166 7.8E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 PRINTS PR00142 RecA protein signature 103 132 7.8E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 PRINTS PR00142 RecA protein signature 175 204 7.8E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 PRINTS PR00142 RecA protein signature 253 282 7.8E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 PRINTS PR00142 RecA protein signature 307 324 7.8E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 PRINTS PR00142 RecA protein signature 220 248 7.8E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 PANTHER PTHR22942:SF1 14 345 1.0E-204 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 PANTHER PTHR22942 14 345 1.0E-204 T 22-04-2016 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 SMART SM00382 67 238 7.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 Hamap MF_00268 Protein RecA [recA]. 14 339 52.195 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 Pfam PF00154 recA bacterial DNA recombination protein 16 278 4.9E-145 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 ProSitePatterns PS00321 recA signature. 223 231 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 Gene3D G3DSA:3.40.50.300 42 277 1.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 SUPERFAMILY SSF52540 13 277 1.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 Gene3D G3DSA:3.30.250.10 278 335 1.8E-31 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RMET_RS02360 ba3b1fc904a78a70893e55f2baee51f8 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 13 333 1.8E-172 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 322 7.8E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 PANTHER PTHR10996:SF118 1 331 1.4E-114 T 22-04-2016 RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 Gene3D G3DSA:3.40.50.720 116 289 5.6E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 Gene3D G3DSA:3.40.50.720 2 115 2.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 SUPERFAMILY SSF51735 101 288 1.8E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 SUPERFAMILY SSF52283 1 136 6.8E-32 T 22-04-2016 RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 287 1.8E-57 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RMET_RS12270 603c9b8c1d24a559f9a10b249c856ccb 331 PANTHER PTHR10996 1 331 1.4E-114 T 22-04-2016 RMET_RS16910 5adf9365abd6fa8032a5fb66567e7043 508 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 40 6.6E-6 T 22-04-2016 RMET_RS16910 5adf9365abd6fa8032a5fb66567e7043 508 PANTHER PTHR35004 2 444 1.6E-73 T 22-04-2016 RMET_RS16910 5adf9365abd6fa8032a5fb66567e7043 508 PANTHER PTHR35004:SF2 2 444 1.6E-73 T 22-04-2016 RMET_RS16910 5adf9365abd6fa8032a5fb66567e7043 508 Gene3D G3DSA:1.10.10.10 5 41 4.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16910 5adf9365abd6fa8032a5fb66567e7043 508 Gene3D G3DSA:3.30.420.10 174 305 7.5E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS16910 5adf9365abd6fa8032a5fb66567e7043 508 Pfam PF00665 Integrase core domain 131 256 1.3E-14 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS02445 5adf9365abd6fa8032a5fb66567e7043 508 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 40 6.6E-6 T 22-04-2016 RMET_RS02445 5adf9365abd6fa8032a5fb66567e7043 508 PANTHER PTHR35004 2 444 1.6E-73 T 22-04-2016 RMET_RS02445 5adf9365abd6fa8032a5fb66567e7043 508 PANTHER PTHR35004:SF2 2 444 1.6E-73 T 22-04-2016 RMET_RS02445 5adf9365abd6fa8032a5fb66567e7043 508 Gene3D G3DSA:1.10.10.10 5 41 4.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02445 5adf9365abd6fa8032a5fb66567e7043 508 Gene3D G3DSA:3.30.420.10 174 305 7.5E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS02445 5adf9365abd6fa8032a5fb66567e7043 508 Pfam PF00665 Integrase core domain 131 256 1.3E-14 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS08895 710d0a55eda45faea9db41ccd0507975 390 Gene3D G3DSA:3.40.710.10 40 387 4.7E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS08895 710d0a55eda45faea9db41ccd0507975 390 SUPERFAMILY SSF56601 36 387 1.27E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS08895 710d0a55eda45faea9db41ccd0507975 390 ProSitePatterns PS00336 Beta-lactamase class-C active site. 89 96 - T 22-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 RMET_RS08895 710d0a55eda45faea9db41ccd0507975 390 Pfam PF00144 Beta-lactamase 41 387 7.7E-74 T 22-04-2016 IPR001466 Beta-lactamase-related RMET_RS08895 710d0a55eda45faea9db41ccd0507975 390 PANTHER PTHR22935 35 390 1.3E-63 T 22-04-2016 RMET_RS08895 710d0a55eda45faea9db41ccd0507975 390 PANTHER PTHR22935:SF64 35 390 1.3E-63 T 22-04-2016 RMET_RS05005 a5d8735c077f59869a0012090b7a9fa5 191 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 178 1.2E-37 T 22-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria RMET_RS05005 a5d8735c077f59869a0012090b7a9fa5 191 SUPERFAMILY SSF144091 5 179 1.57E-19 T 22-04-2016 RMET_RS05005 a5d8735c077f59869a0012090b7a9fa5 191 Gene3D G3DSA:1.20.1540.10 6 176 3.5E-11 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RMET_RS05005 a5d8735c077f59869a0012090b7a9fa5 191 Pfam PF01694 Rhomboid family 34 175 7.1E-8 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RMET_RS12515 c611832694ea5d616300d9bed3516f21 528 PANTHER PTHR30290 2 282 3.8E-109 T 22-04-2016 RMET_RS12515 c611832694ea5d616300d9bed3516f21 528 PANTHER PTHR30290 299 511 3.8E-109 T 22-04-2016 RMET_RS12515 c611832694ea5d616300d9bed3516f21 528 Gene3D G3DSA:3.10.105.10 308 497 3.5E-48 T 22-04-2016 RMET_RS12515 c611832694ea5d616300d9bed3516f21 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 432 2.4E-87 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RMET_RS12515 c611832694ea5d616300d9bed3516f21 528 SUPERFAMILY SSF53850 25 510 8.14E-120 T 22-04-2016 RMET_RS12515 c611832694ea5d616300d9bed3516f21 528 PIRSF PIRSF002741 2 519 9.0E-94 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RMET_RS12515 c611832694ea5d616300d9bed3516f21 528 Gene3D G3DSA:3.90.76.10 41 188 5.2E-32 T 22-04-2016 RMET_RS12515 c611832694ea5d616300d9bed3516f21 528 Gene3D G3DSA:3.40.190.10 189 307 1.4E-38 T 22-04-2016 RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 Gene3D G3DSA:3.40.30.10 16 74 3.1E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 Pfam PF17172 Glutathione S-transferase N-terminal domain 18 114 2.3E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 SUPERFAMILY SSF47616 142 228 3.69E-10 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 SUPERFAMILY SSF47616 84 107 3.69E-10 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 Gene3D G3DSA:1.20.1050.10 140 234 1.1E-8 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 Pfam PF17171 Glutathione S-transferase, C-terminal domain 167 225 7.7E-16 T 22-04-2016 IPR033468 Metaxin, glutathione S-transferase domain RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 PANTHER PTHR12289 1 232 4.7E-80 T 22-04-2016 RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 SUPERFAMILY SSF52833 16 101 1.26E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS05720 e4f64d23d8e2109a3c1899219075922d 257 PANTHER PTHR12289:SF39 1 232 4.7E-80 T 22-04-2016 RMET_RS09225 40992c24da30abf33ab8db9d3315d7b0 336 PANTHER PTHR23024 69 332 1.3E-82 T 22-04-2016 RMET_RS09225 40992c24da30abf33ab8db9d3315d7b0 336 Gene3D G3DSA:3.40.50.1820 15 334 2.5E-88 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS09225 40992c24da30abf33ab8db9d3315d7b0 336 PANTHER PTHR23024:SF24 69 332 1.3E-82 T 22-04-2016 RMET_RS09225 40992c24da30abf33ab8db9d3315d7b0 336 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 101 117 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RMET_RS09225 40992c24da30abf33ab8db9d3315d7b0 336 SUPERFAMILY SSF53474 62 333 5.5E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS09225 40992c24da30abf33ab8db9d3315d7b0 336 Pfam PF07859 alpha/beta hydrolase fold 101 310 2.8E-74 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 Gene3D G3DSA:3.30.470.30 113 164 7.2E-20 T 22-04-2016 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 109 138 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 95 164 1.5E-25 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 2 67 5.8E-20 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 Gene3D G3DSA:1.10.287.610 2 28 6.2E-11 T 22-04-2016 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 SMART SM00532 2 164 2.9E-5 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 PANTHER PTHR23389 97 164 3.7E-46 T 22-04-2016 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 PANTHER PTHR23389 2 63 3.7E-46 T 22-04-2016 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 SUPERFAMILY SSF56091 2 63 1.17E-43 T 22-04-2016 RMET_RS25055 3aaea68c28aaa938bdbb042a867b400d 164 SUPERFAMILY SSF56091 100 164 1.17E-43 T 22-04-2016 RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 PANTHER PTHR23083 25 229 9.1E-28 T 22-04-2016 RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 9 243 4.8E-67 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 Pfam PF13432 Tetratricopeptide repeat 80 137 0.0032 T 22-04-2016 RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 Gene3D G3DSA:1.25.40.10 40 230 4.6E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 SMART SM00028 74 107 0.14 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 SMART SM00028 40 73 23.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 SMART SM00028 144 177 23.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 SMART SM00028 108 141 27.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS10555 dbb4460bdd76e051d1ed50d622e87bc3 258 SUPERFAMILY SSF48452 46 200 2.91E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 PIRSF PIRSF006787 1 577 6.3E-261 T 22-04-2016 IPR009188 [NiFe]-hydrogenase maturation factor, HypX/HoxX type RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 Pfam PF02911 Formyl transferase, C-terminal domain 177 261 9.6E-6 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 SUPERFAMILY SSF53328 10 149 2.49E-24 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 Gene3D G3DSA:3.90.226.10 290 512 1.6E-20 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 PANTHER PTHR11138:SF1 24 256 4.3E-198 T 22-04-2016 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 PANTHER PTHR11138:SF1 312 568 4.3E-198 T 22-04-2016 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 SUPERFAMILY SSF50486 177 261 2.35E-10 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 Pfam PF00378 Enoyl-CoA hydratase/isomerase 324 518 4.2E-18 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 SUPERFAMILY SSF52096 295 558 1.04E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 Pfam PF00551 Formyl transferase 39 143 3.8E-9 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 PANTHER PTHR11138 24 256 4.3E-198 T 22-04-2016 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 PANTHER PTHR11138 312 568 4.3E-198 T 22-04-2016 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 Gene3D G3DSA:3.10.25.10 180 261 1.4E-4 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS07755 59661dd13945cabd1f9bed251a878ee1 579 Gene3D G3DSA:3.40.50.170 37 150 2.4E-18 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RMET_RS06665 7068c863a89be82dc1f13b391661011a 260 PANTHER PTHR30143 1 259 4.2E-77 T 22-04-2016 RMET_RS06665 7068c863a89be82dc1f13b391661011a 260 Gene3D G3DSA:3.90.850.10 1 259 1.4E-88 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS06665 7068c863a89be82dc1f13b391661011a 260 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 101 257 1.0E-9 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS06665 7068c863a89be82dc1f13b391661011a 260 TIGRFAM TIGR03220 catechol_dmpE: 2-oxopent-4-enoate hydratase 5 259 2.3E-149 T 22-04-2016 IPR017632 2-oxopent-4-enoate hydratase RMET_RS06665 7068c863a89be82dc1f13b391661011a 260 SUPERFAMILY SSF56529 1 259 1.31E-82 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS17830 c45ab3eca7190bdb9966a9609ae157e0 157 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 8 150 4.2E-22 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 248 4.2E-60 T 22-04-2016 RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 Gene3D G3DSA:3.40.50.720 5 248 6.2E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 SUPERFAMILY SSF51735 3 249 2.13E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PANTHER PTHR24321 5 249 3.9E-36 T 22-04-2016 RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PANTHER PTHR24321:SF6 5 249 3.9E-36 T 22-04-2016 RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS06735 656102ff185424ccaffca4d44da1cf2b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 Pfam PF10531 SLBB domain 248 296 2.4E-12 T 22-04-2016 IPR019554 Soluble ligand binding domain RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 SUPERFAMILY SSF142984 246 329 4.58E-25 T 22-04-2016 RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 SMART SM00928 334 379 6.9E-24 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 PANTHER PTHR11780:SF10 22 429 9.0E-214 T 22-04-2016 RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 420 3.4E-192 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 SUPERFAMILY SSF140490 331 428 4.45E-37 T 22-04-2016 RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 338 419 6.5E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 SUPERFAMILY SSF142019 20 244 1.44E-81 T 22-04-2016 RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 PANTHER PTHR11780 22 429 9.0E-214 T 22-04-2016 RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 53 224 4.3E-46 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RMET_RS04690 72fbf7cfd8ad93b76019e0d39bbeb352 431 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 347 358 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 PANTHER PTHR10890 3 462 1.6E-228 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 317 1.8E-130 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 SUPERFAMILY SSF47323 321 460 7.72E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 461 4.2E-171 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 SMART SM00840 347 402 5.6E-25 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 461 38.998 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 Gene3D G3DSA:1.20.120.640 312 392 7.4E-20 T 22-04-2016 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 Gene3D G3DSA:3.40.50.620 21 310 1.8E-110 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 Pfam PF09190 DALR domain 347 402 1.0E-17 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 SUPERFAMILY SSF52374 4 318 1.1E-99 T 22-04-2016 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 1.52E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 1.52E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 1.52E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05455 944146978f16d448d7c4f3e4a63a77b7 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 1.52E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS00445 2c2c487479a04a1f98a5dd862b8dd4f0 130 SMART SM00450 5 113 5.9E-14 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS00445 2c2c487479a04a1f98a5dd862b8dd4f0 130 Pfam PF00581 Rhodanese-like domain 6 105 7.0E-13 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS00445 2c2c487479a04a1f98a5dd862b8dd4f0 130 Gene3D G3DSA:3.40.250.10 2 129 2.5E-32 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS00445 2c2c487479a04a1f98a5dd862b8dd4f0 130 SUPERFAMILY SSF52821 2 129 1.23E-22 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 Gene3D G3DSA:3.40.50.10490 96 290 1.1E-80 T 22-04-2016 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 Gene3D G3DSA:1.10.1390.10 498 536 7.7E-18 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 Gene3D G3DSA:3.40.50.10490 5 95 5.1E-125 T 22-04-2016 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 Gene3D G3DSA:3.40.50.10490 292 497 5.1E-125 T 22-04-2016 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 SUPERFAMILY SSF53697 2 536 3.61E-203 T 22-04-2016 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 488 505 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 PANTHER PTHR11469:SF4 1 540 2.4E-279 T 22-04-2016 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 Pfam PF00342 Phosphoglucose isomerase 49 531 5.4E-206 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 515 40.379 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 PANTHER PTHR11469 1 540 2.4E-279 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 474 1.9E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 474 488 1.9E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 260 278 1.9E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 337 358 1.9E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 1.9E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 501 1.9E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS09410 a2022a0379e122691e8617840cd0501e 541 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 264 277 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RMET_RS02250 d063dc8d4d4f4d663bc39fe40f1fac70 253 SUPERFAMILY SSF69593 7 245 2.75E-35 T 22-04-2016 RMET_RS02250 d063dc8d4d4f4d663bc39fe40f1fac70 253 SMART SM00563 75 191 2.3E-20 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RMET_RS02250 d063dc8d4d4f4d663bc39fe40f1fac70 253 Gene3D G3DSA:3.40.1130.10 61 234 1.4E-18 T 22-04-2016 RMET_RS02250 d063dc8d4d4f4d663bc39fe40f1fac70 253 PANTHER PTHR10434 4 246 1.0E-42 T 22-04-2016 RMET_RS02250 d063dc8d4d4f4d663bc39fe40f1fac70 253 Pfam PF01553 Acyltransferase 60 188 1.0E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RMET_RS11960 51aebe5583026433a44b8beb6c5b8e13 207 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS11960 51aebe5583026433a44b8beb6c5b8e13 207 PANTHER PTHR24220:SF508 7 193 7.7E-66 T 22-04-2016 RMET_RS11960 51aebe5583026433a44b8beb6c5b8e13 207 Pfam PF00005 ABC transporter 22 162 2.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS11960 51aebe5583026433a44b8beb6c5b8e13 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 6 205 3.6E-62 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 RMET_RS11960 51aebe5583026433a44b8beb6c5b8e13 207 Gene3D G3DSA:3.40.50.300 2 195 4.6E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11960 51aebe5583026433a44b8beb6c5b8e13 207 PANTHER PTHR24220 7 193 7.7E-66 T 22-04-2016 RMET_RS11960 51aebe5583026433a44b8beb6c5b8e13 207 SMART SM00382 30 206 4.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS11960 51aebe5583026433a44b8beb6c5b8e13 207 SUPERFAMILY SSF52540 4 193 4.42E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS24695 9d130dfe4ab6e55606847b0f92c84fd2 63 Pfam PF10038 Protein of unknown function (DUF2274) 15 63 9.5E-16 T 22-04-2016 IPR018733 Protein of unknown function DUF2274 RMET_RS10085 e5de5b08a4d4d8c694a0774c146c1e62 446 SUPERFAMILY SSF56563 153 443 8.89E-42 T 22-04-2016 RMET_RS10085 e5de5b08a4d4d8c694a0774c146c1e62 446 Pfam PF05065 Phage capsid family 161 425 4.2E-27 T 22-04-2016 IPR024455 Phage capsid RMET_RS10085 e5de5b08a4d4d8c694a0774c146c1e62 446 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 17 401 1.4E-30 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 RMET_RS16460 74a41e7025a50cb0211dfbf5ecfbe105 407 Pfam PF01578 Cytochrome C assembly protein 198 402 7.8E-51 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RMET_RS16460 74a41e7025a50cb0211dfbf5ecfbe105 407 PANTHER PTHR30071:SF5 128 407 8.2E-68 T 22-04-2016 RMET_RS16460 74a41e7025a50cb0211dfbf5ecfbe105 407 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 168 405 2.2E-75 T 22-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 RMET_RS16460 74a41e7025a50cb0211dfbf5ecfbe105 407 PANTHER PTHR30071 128 407 8.2E-68 T 22-04-2016 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 PRINTS PR00412 Epoxide hydrolase signature 55 70 1.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 PRINTS PR00412 Epoxide hydrolase signature 114 127 1.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 PRINTS PR00412 Epoxide hydrolase signature 100 113 1.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 PANTHER PTHR10992 10 273 3.7E-54 T 22-04-2016 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 SUPERFAMILY SSF53474 5 271 2.5E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 Pfam PF00561 alpha/beta hydrolase fold 28 259 3.4E-27 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 1.7E-28 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 1.7E-28 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 1.7E-28 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 1.7E-28 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06585 a807c0de4e8e092385bb2eb539ccb8a5 276 Gene3D G3DSA:3.40.50.1820 10 273 2.3E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 Gene3D G3DSA:3.20.20.60 268 583 2.3E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 165 237 1.0E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 SUPERFAMILY SSF51621 261 562 6.54E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 7.7E-29 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 SUPERFAMILY SSF52009 128 257 6.02E-32 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 Gene3D G3DSA:1.10.274.10 27 135 1.5E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 PANTHER PTHR22931 34 565 4.7E-152 T 22-04-2016 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 263 556 5.9E-112 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 SUPERFAMILY SSF47831 28 146 1.06E-29 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 Gene3D G3DSA:3.50.30.10 136 267 6.8E-44 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 578 1.8E-158 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 PIRSF PIRSF000732 1 585 3.5E-211 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 462 480 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 PANTHER PTHR22931:SF28 34 565 4.7E-152 T 22-04-2016 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 196 207 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 305 324 1.2E-23 T 22-04-2016 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 479 494 1.2E-23 T 22-04-2016 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 515 527 1.2E-23 T 22-04-2016 RMET_RS01250 8fd2410ab61d55e149f48f2de1446570 585 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 462 477 1.2E-23 T 22-04-2016 RMET_RS09745 554477c418d0638bb290f1c2e296c845 276 Gene3D G3DSA:1.10.600.10 5 274 1.5E-66 T 22-04-2016 IPR008949 Isoprenoid synthase domain RMET_RS09745 554477c418d0638bb290f1c2e296c845 276 Pfam PF00494 Squalene/phytoene synthase 13 261 1.3E-58 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RMET_RS09745 554477c418d0638bb290f1c2e296c845 276 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 273 3.2E-103 T 22-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 RMET_RS09745 554477c418d0638bb290f1c2e296c845 276 SUPERFAMILY SSF48576 4 274 4.17E-66 T 22-04-2016 IPR008949 Isoprenoid synthase domain RMET_RS09745 554477c418d0638bb290f1c2e296c845 276 PANTHER PTHR31480 5 274 5.0E-46 T 22-04-2016 RMET_RS00680 5c2c653d5525adf621b61ce0c2e8e218 175 Pfam PF07987 Domain of unkown function (DUF1775) 21 164 1.4E-51 T 22-04-2016 IPR012533 GLE1, N-terminal, bacteria RMET_RS12590 73ef069d1dcd4bafd5aee447e7a12fd9 324 PANTHER PTHR12715:SF9 12 298 7.0E-77 T 22-04-2016 RMET_RS12590 73ef069d1dcd4bafd5aee447e7a12fd9 324 PANTHER PTHR12715 12 298 7.0E-77 T 22-04-2016 RMET_RS12590 73ef069d1dcd4bafd5aee447e7a12fd9 324 SUPERFAMILY SSF103481 53 144 2.22E-8 T 22-04-2016 RMET_RS12590 73ef069d1dcd4bafd5aee447e7a12fd9 324 SUPERFAMILY SSF103481 191 293 1.22E-9 T 22-04-2016 RMET_RS12590 73ef069d1dcd4bafd5aee447e7a12fd9 324 Pfam PF00892 EamA-like transporter family 160 293 1.1E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS12590 73ef069d1dcd4bafd5aee447e7a12fd9 324 Pfam PF00892 EamA-like transporter family 12 139 5.9E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS11110 3c8b9f3ec6754be773022ebae50734c6 227 SUPERFAMILY SSF55469 11 208 3.27E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RMET_RS11110 3c8b9f3ec6754be773022ebae50734c6 227 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 8 207 1.2E-66 T 22-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 RMET_RS11110 3c8b9f3ec6754be773022ebae50734c6 227 PANTHER PTHR21712 6 208 6.2E-57 T 22-04-2016 RMET_RS11110 3c8b9f3ec6754be773022ebae50734c6 227 PANTHER PTHR21712:SF31 6 208 6.2E-57 T 22-04-2016 RMET_RS11110 3c8b9f3ec6754be773022ebae50734c6 227 Pfam PF00881 Nitroreductase family 21 182 2.9E-27 T 22-04-2016 IPR029479 Nitroreductase RMET_RS11110 3c8b9f3ec6754be773022ebae50734c6 227 Gene3D G3DSA:3.40.109.10 8 208 8.4E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RMET_RS04815 618e9fd5f17ccf4bd4afd51d73f211ce 293 PANTHER PTHR33643 15 290 2.4E-38 T 22-04-2016 RMET_RS04815 618e9fd5f17ccf4bd4afd51d73f211ce 293 Pfam PF01774 UreD urease accessory protein 58 266 2.0E-46 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RMET_RS04815 618e9fd5f17ccf4bd4afd51d73f211ce 293 Hamap MF_01384 Urease accessory protein UreD [ureD]. 16 277 30.242 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RMET_RS04815 618e9fd5f17ccf4bd4afd51d73f211ce 293 PANTHER PTHR33643:SF1 15 290 2.4E-38 T 22-04-2016 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 SMART SM00420 9 61 5.5E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 Pfam PF00455 DeoR C terminal sensor domain 78 236 3.6E-52 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 SUPERFAMILY SSF100950 78 237 1.15E-25 T 22-04-2016 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 Gene3D G3DSA:1.10.10.10 3 67 1.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 PANTHER PTHR30363 4 259 4.5E-99 T 22-04-2016 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 SUPERFAMILY SSF46785 6 65 3.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.0E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.0E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.1E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 PANTHER PTHR30363:SF1 4 259 4.5E-99 T 22-04-2016 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 SMART SM01134 76 237 8.1E-73 T 22-04-2016 RMET_RS11220 dbebbb03b444d11de9203ea7adfd981e 259 Gene3D G3DSA:3.30.750.70 81 169 3.1E-11 T 22-04-2016 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 454 3.8E-117 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 Pfam PF02142 MGS-like domain 14 129 9.3E-32 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 SMART SM00851 14 129 7.5E-66 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 Gene3D G3DSA:3.40.50.1380 1 187 6.1E-87 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 524 9.1E-226 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 PANTHER PTHR11692 1 524 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 PANTHER PTHR11692:SF2 1 524 0.0 T 22-04-2016 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 Gene3D G3DSA:3.40.140.20 247 364 1.1E-47 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 524 44.975 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 SMART SM00798 134 456 2.7E-204 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 Gene3D G3DSA:3.40.140.20 371 514 1.5E-55 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 SUPERFAMILY SSF53927 215 524 5.01E-125 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 PIRSF PIRSF000414 1 524 1.1E-216 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RMET_RS02155 3b600a3585386aa965cf1d9de3a1a983 524 SUPERFAMILY SSF52335 2 193 1.83E-72 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RMET_RS10485 35ff44db6a506a8743009618b454b187 203 PANTHER PTHR15020:SF29 1 203 2.3E-71 T 22-04-2016 RMET_RS10485 35ff44db6a506a8743009618b454b187 203 PANTHER PTHR15020 1 203 2.3E-71 T 22-04-2016 RMET_RS10485 35ff44db6a506a8743009618b454b187 203 Gene3D G3DSA:3.40.50.720 1 203 6.0E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS10485 35ff44db6a506a8743009618b454b187 203 Pfam PF13460 NAD(P)H-binding 7 191 1.5E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS10485 35ff44db6a506a8743009618b454b187 203 SUPERFAMILY SSF51735 1 202 1.77E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13305 768346c9a2bb94a00b878bf3cda1297a 186 Gene3D G3DSA:2.30.110.10 16 178 3.1E-56 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS13305 768346c9a2bb94a00b878bf3cda1297a 186 SMART SM00903 29 180 6.7E-58 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RMET_RS13305 768346c9a2bb94a00b878bf3cda1297a 186 PANTHER PTHR30466 7 160 7.1E-34 T 22-04-2016 RMET_RS13305 768346c9a2bb94a00b878bf3cda1297a 186 PANTHER PTHR30466:SF1 7 160 7.1E-34 T 22-04-2016 RMET_RS13305 768346c9a2bb94a00b878bf3cda1297a 186 Pfam PF01613 Flavin reductase like domain 30 181 7.5E-34 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RMET_RS13305 768346c9a2bb94a00b878bf3cda1297a 186 SUPERFAMILY SSF50475 10 181 5.4E-45 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS03195 19b8ef458daccdb203d215b17d711045 1115 Pfam PF06744 Type VI secretion protein IcmF C-terminal 824 1021 2.4E-49 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal RMET_RS03195 19b8ef458daccdb203d215b17d711045 1115 PANTHER PTHR36153:SF1 316 1094 4.8E-84 T 22-04-2016 RMET_RS03195 19b8ef458daccdb203d215b17d711045 1115 Pfam PF06761 Intracellular multiplication and human macrophage-killing 372 691 1.7E-69 T 22-04-2016 IPR009612 ImcF-related RMET_RS03195 19b8ef458daccdb203d215b17d711045 1115 PANTHER PTHR36153 316 1094 4.8E-84 T 22-04-2016 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 SMART SM00876 248 340 4.0E-46 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 PIRSF PIRSF001619 15 344 1.6E-134 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 SUPERFAMILY SSF102114 34 339 9.94E-92 T 22-04-2016 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 PANTHER PTHR22976 5 336 1.5E-163 T 22-04-2016 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 248 337 1.0E-18 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 Hamap MF_01694 Biotin synthase [bioB]. 33 341 42.26 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 PANTHER PTHR22976:SF19 5 336 1.5E-163 T 22-04-2016 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 TIGRFAM TIGR00433 bioB: biotin synthase 43 338 9.7E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 Gene3D G3DSA:3.20.20.70 34 339 5.3E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 SMART SM00729 71 283 5.8E-38 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS00600 aa08b11e7a698cc8a55a057a49226920 345 Pfam PF04055 Radical SAM superfamily 78 224 1.4E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS13600 61866de2fdd413698614ab57e8e263ee 254 Pfam PF16859 Bacterial transcriptional repressor C-terminal 99 184 2.9E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS13600 61866de2fdd413698614ab57e8e263ee 254 SUPERFAMILY SSF48498 93 213 1.11E-19 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS13600 61866de2fdd413698614ab57e8e263ee 254 SUPERFAMILY SSF46689 12 80 3.9E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS13600 61866de2fdd413698614ab57e8e263ee 254 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 70 1.9E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS13600 61866de2fdd413698614ab57e8e263ee 254 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS13600 61866de2fdd413698614ab57e8e263ee 254 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS13600 61866de2fdd413698614ab57e8e263ee 254 Gene3D G3DSA:1.10.357.10 10 212 9.9E-44 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS13600 61866de2fdd413698614ab57e8e263ee 254 PANTHER PTHR30055 11 251 1.0E-28 T 22-04-2016 RMET_RS02395 fe4c476103b5d649c56a9939815223f6 139 Gene3D G3DSA:3.30.700.10 1 138 1.1E-33 T 22-04-2016 RMET_RS02395 fe4c476103b5d649c56a9939815223f6 139 SUPERFAMILY SSF54523 16 139 2.77E-32 T 22-04-2016 RMET_RS02395 fe4c476103b5d649c56a9939815223f6 139 Pfam PF00114 Pilin (bacterial filament) 23 139 7.6E-22 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RMET_RS15390 d5c95351f64643f55488b42f195e3f1e 201 Pfam PF07382 Histone H1-like nucleoprotein HC2 4 200 3.0E-23 T 22-04-2016 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 PANTHER PTHR10520 7 349 5.2E-209 T 22-04-2016 RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 SUPERFAMILY SSF55326 12 175 1.48E-53 T 22-04-2016 RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 344 1.5E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 SUPERFAMILY SSF56042 176 346 5.38E-61 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 1.1E-139 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 Gene3D G3DSA:3.30.1330.10 27 175 1.2E-64 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 Gene3D G3DSA:3.90.650.10 176 347 1.6E-68 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 348 47.006 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RMET_RS14590 2e52e23402b1674430a0c996338bb983 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 169 1.5E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 325 3.8E-14 T 22-04-2016 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 3.8E-14 T 22-04-2016 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 3.8E-14 T 22-04-2016 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 Gene3D G3DSA:3.50.50.60 15 165 3.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 Gene3D G3DSA:3.50.50.60 207 208 3.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 Gene3D G3DSA:3.50.50.60 298 379 3.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 Pfam PF01494 FAD binding domain 16 353 3.2E-18 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 PANTHER PTHR13789:SF214 16 412 4.5E-88 T 22-04-2016 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 SUPERFAMILY SSF51905 14 191 3.7E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 SUPERFAMILY SSF51905 306 413 3.7E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 16 412 1.5E-99 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 PANTHER PTHR13789 16 412 4.5E-88 T 22-04-2016 RMET_RS02170 d7f63e87ea74a5df6c98ac94a2e5efbe 417 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 324 337 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RMET_RS31030 4e7f521be7cee532cce72d2f683554cd 78 PANTHER PTHR32552 1 78 2.9E-18 T 22-04-2016 RMET_RS31030 4e7f521be7cee532cce72d2f683554cd 78 SUPERFAMILY SSF53098 44 78 1.42E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS31030 4e7f521be7cee532cce72d2f683554cd 78 Gene3D G3DSA:3.30.420.10 45 78 3.1E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS17020 63935ba2e3bf52d4bfa14c9315bdf608 327 Gene3D G3DSA:1.10.40.60 181 213 1.5E-4 T 22-04-2016 RMET_RS17020 63935ba2e3bf52d4bfa14c9315bdf608 327 SUPERFAMILY SSF54523 277 304 7.38E-7 T 22-04-2016 RMET_RS17020 63935ba2e3bf52d4bfa14c9315bdf608 327 SUPERFAMILY SSF54523 39 114 7.38E-7 T 22-04-2016 RMET_RS17020 63935ba2e3bf52d4bfa14c9315bdf608 327 Gene3D G3DSA:3.30.1300.30 278 305 3.0E-5 T 22-04-2016 RMET_RS17020 63935ba2e3bf52d4bfa14c9315bdf608 327 Gene3D G3DSA:3.30.1300.30 27 98 3.0E-5 T 22-04-2016 RMET_RS17020 63935ba2e3bf52d4bfa14c9315bdf608 327 PIRSF PIRSF002786 1 319 1.9E-73 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RMET_RS17020 63935ba2e3bf52d4bfa14c9315bdf608 327 Pfam PF03934 Type II secretion system (T2SS), protein K 30 306 8.2E-74 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RMET_RS17020 63935ba2e3bf52d4bfa14c9315bdf608 327 SUPERFAMILY SSF158544 115 213 2.88E-13 T 22-04-2016 RMET_RS10365 df592dbd1d04819cc06fe1455c376b09 427 Gene3D G3DSA:1.20.1250.20 214 408 8.0E-22 T 22-04-2016 RMET_RS10365 df592dbd1d04819cc06fe1455c376b09 427 Pfam PF07690 Major Facilitator Superfamily 28 377 3.8E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS10365 df592dbd1d04819cc06fe1455c376b09 427 SUPERFAMILY SSF103473 10 413 1.44E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS10365 df592dbd1d04819cc06fe1455c376b09 427 Gene3D G3DSA:1.20.1250.20 19 201 3.8E-26 T 22-04-2016 RMET_RS10365 df592dbd1d04819cc06fe1455c376b09 427 PANTHER PTHR23515 14 410 1.3E-77 T 22-04-2016 RMET_RS17380 f2c944071f704f38dc0c6fe45b0d81a4 340 PANTHER PTHR37826:SF2 6 279 9.1E-67 T 22-04-2016 RMET_RS17380 f2c944071f704f38dc0c6fe45b0d81a4 340 SUPERFAMILY SSF117892 90 231 5.1E-12 T 22-04-2016 IPR001107 Band 7 domain RMET_RS17380 f2c944071f704f38dc0c6fe45b0d81a4 340 Pfam PF09851 Short C-terminal domain 309 335 2.4E-7 T 22-04-2016 IPR018649 SHOCT domain RMET_RS17380 f2c944071f704f38dc0c6fe45b0d81a4 340 PANTHER PTHR37826 6 279 9.1E-67 T 22-04-2016 RMET_RS17380 f2c944071f704f38dc0c6fe45b0d81a4 340 Pfam PF13421 SPFH domain-Band 7 family 26 235 3.4E-78 T 22-04-2016 RMET_RS06965 f7a67f5317b6d7087ffb814e8d27e46e 166 SUPERFAMILY SSF89562 5 163 6.54E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RMET_RS06965 f7a67f5317b6d7087ffb814e8d27e46e 166 Pfam PF03737 Demethylmenaquinone methyltransferase 5 158 4.3E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RMET_RS06965 f7a67f5317b6d7087ffb814e8d27e46e 166 PANTHER PTHR33254:SF4 1 163 4.3E-75 T 22-04-2016 RMET_RS06965 f7a67f5317b6d7087ffb814e8d27e46e 166 PANTHER PTHR33254 1 163 4.3E-75 T 22-04-2016 RMET_RS06965 f7a67f5317b6d7087ffb814e8d27e46e 166 Gene3D G3DSA:3.50.30.40 5 163 1.3E-51 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RMET_RS06965 f7a67f5317b6d7087ffb814e8d27e46e 166 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 159 8.3E-64 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 RMET_RS14800 386b79903e131b1ab18efa79b560bf6b 463 Pfam PF13649 Methyltransferase domain 288 401 4.4E-9 T 22-04-2016 RMET_RS14800 386b79903e131b1ab18efa79b560bf6b 463 SUPERFAMILY SSF53335 263 428 2.94E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14800 386b79903e131b1ab18efa79b560bf6b 463 Gene3D G3DSA:3.40.50.150 264 424 1.9E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 231 343 1.7E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Gene3D G3DSA:1.10.1780.10 11 130 2.7E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Gene3D G3DSA:3.40.50.300 188 370 9.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Gene3D G3DSA:1.10.8.60 372 451 1.0E-29 T 22-04-2016 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Pfam PF07724 AAA domain (Cdc48 subfamily) 612 781 5.8E-39 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 SMART SM01086 787 880 3.2E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 787 858 3.8E-11 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 871 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 SUPERFAMILY SSF52540 187 532 5.81E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 322 334 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Gene3D G3DSA:3.40.50.300 566 738 1.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Gene3D G3DSA:3.40.50.300 771 797 1.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 SUPERFAMILY SSF81923 12 131 1.94E-16 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 66 7.7E-4 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 Gene3D G3DSA:1.10.8.60 798 859 6.5E-9 T 22-04-2016 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 SMART SM00382 226 371 5.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 SMART SM00382 612 766 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 SUPERFAMILY SSF52540 561 855 3.58E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 PANTHER PTHR11638:SF11 151 876 0.0 T 22-04-2016 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 PANTHER PTHR11638:SF11 2 132 0.0 T 22-04-2016 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 PANTHER PTHR11638 151 876 0.0 T 22-04-2016 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 PANTHER PTHR11638 2 132 0.0 T 22-04-2016 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 661 679 5.3E-34 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 5.3E-34 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 723 737 5.3E-34 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS03125 630a75a6c180db15df78cd1431e31a8e 893 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 690 708 5.3E-34 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RMET_RS00890 fdc97bc7f99388c36325cd6734b07a86 202 PANTHER PTHR23407:SF1 20 198 7.3E-25 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RMET_RS00890 fdc97bc7f99388c36325cd6734b07a86 202 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 23 198 1.1E-20 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RMET_RS00890 fdc97bc7f99388c36325cd6734b07a86 202 Gene3D G3DSA:3.40.50.10420 21 200 7.2E-38 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RMET_RS00890 fdc97bc7f99388c36325cd6734b07a86 202 SUPERFAMILY SSF100950 21 200 1.13E-39 T 22-04-2016 RMET_RS00890 fdc97bc7f99388c36325cd6734b07a86 202 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 23 198 1.0E-34 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RMET_RS00890 fdc97bc7f99388c36325cd6734b07a86 202 PIRSF PIRSF006806 18 200 1.6E-24 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RMET_RS00890 fdc97bc7f99388c36325cd6734b07a86 202 PANTHER PTHR23407 20 198 7.3E-25 T 22-04-2016 RMET_RS14530 1672864f7c80e2041a6fc0d54918633b 161 PANTHER PTHR30476:SF0 1 161 6.0E-75 T 22-04-2016 RMET_RS14530 1672864f7c80e2041a6fc0d54918633b 161 Gene3D G3DSA:3.30.70.860 95 161 6.6E-32 T 22-04-2016 RMET_RS14530 1672864f7c80e2041a6fc0d54918633b 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 8.5E-66 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RMET_RS14530 1672864f7c80e2041a6fc0d54918633b 161 PANTHER PTHR30476 1 161 6.0E-75 T 22-04-2016 RMET_RS14530 1672864f7c80e2041a6fc0d54918633b 161 Gene3D G3DSA:3.30.70.990 9 94 1.5E-33 T 22-04-2016 RMET_RS14530 1672864f7c80e2041a6fc0d54918633b 161 SUPERFAMILY SSF89963 89 161 9.68E-27 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RMET_RS14530 1672864f7c80e2041a6fc0d54918633b 161 SUPERFAMILY SSF89963 2 87 4.97E-32 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RMET_RS14530 1672864f7c80e2041a6fc0d54918633b 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.03 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RMET_RS10990 991472535469cd723ef9cd88df9ec0fe 221 SUPERFAMILY SSF53335 2 218 6.15E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS10990 991472535469cd723ef9cd88df9ec0fe 221 PANTHER PTHR10920:SF20 1 215 2.8E-90 T 22-04-2016 RMET_RS10990 991472535469cd723ef9cd88df9ec0fe 221 PANTHER PTHR10920 1 215 2.8E-90 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RMET_RS10990 991472535469cd723ef9cd88df9ec0fe 221 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 217 31.659 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RMET_RS10990 991472535469cd723ef9cd88df9ec0fe 221 Pfam PF01728 FtsJ-like methyltransferase 28 215 2.0E-51 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RMET_RS10990 991472535469cd723ef9cd88df9ec0fe 221 PIRSF PIRSF005461 1 220 1.3E-69 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RMET_RS10990 991472535469cd723ef9cd88df9ec0fe 221 Gene3D G3DSA:3.40.50.150 3 219 6.0E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 Gene3D G3DSA:1.10.3720.10 57 259 2.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 396 575 1.7E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 258 4.5E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 PANTHER PTHR30151:SF10 72 230 4.7E-153 T 22-04-2016 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 PANTHER PTHR30151:SF10 373 578 4.7E-153 T 22-04-2016 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 PANTHER PTHR30151 72 230 4.7E-153 T 22-04-2016 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 PANTHER PTHR30151 373 578 4.7E-153 T 22-04-2016 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 Gene3D G3DSA:1.10.3720.10 379 567 1.2E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 SUPERFAMILY SSF161098 67 262 2.09E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15970 bbe53a353bdbedef7a9c3d6b32f0bbc0 581 SUPERFAMILY SSF161098 377 566 7.59E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS17065 25b602b628488fd7357a9b85258c681a 141 PANTHER PTHR23091 2 128 3.4E-24 T 22-04-2016 RMET_RS17065 25b602b628488fd7357a9b85258c681a 141 Gene3D G3DSA:3.40.630.30 3 125 1.5E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS17065 25b602b628488fd7357a9b85258c681a 141 Pfam PF00583 Acetyltransferase (GNAT) family 53 126 2.8E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS17065 25b602b628488fd7357a9b85258c681a 141 SUPERFAMILY SSF55729 3 129 4.56E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 SMART SM00563 463 579 5.5E-32 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 Gene3D G3DSA:1.20.1250.20 232 432 4.0E-9 T 22-04-2016 RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 Pfam PF01553 Acyltransferase 453 576 4.4E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 Gene3D G3DSA:3.40.1130.10 444 576 5.6E-18 T 22-04-2016 RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 Gene3D G3DSA:1.20.1250.20 19 194 1.9E-7 T 22-04-2016 RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 SUPERFAMILY SSF103473 9 432 5.89E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 PANTHER PTHR10434:SF15 353 630 3.4E-123 T 22-04-2016 RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 SUPERFAMILY SSF69593 408 621 4.18E-33 T 22-04-2016 RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 PANTHER PTHR10434 353 630 3.4E-123 T 22-04-2016 RMET_RS05715 d390870c6dcb70cbad3cb856391e676f 634 Pfam PF07690 Major Facilitator Superfamily 19 388 6.8E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS08865 894ffaae1f5bfe2652945bd1308b89dd 475 Gene3D G3DSA:3.90.1300.10 3 472 2.0E-128 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS08865 894ffaae1f5bfe2652945bd1308b89dd 475 SUPERFAMILY SSF75304 4 473 3.01E-129 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS08865 894ffaae1f5bfe2652945bd1308b89dd 475 Pfam PF01425 Amidase 26 456 4.5E-96 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS08865 894ffaae1f5bfe2652945bd1308b89dd 475 PANTHER PTHR11895 1 473 2.0E-130 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS17610 e008dc6d92b6f3581ae49dd2f4d17e06 235 PANTHER PTHR31760:SF0 15 232 1.3E-60 T 22-04-2016 RMET_RS17610 e008dc6d92b6f3581ae49dd2f4d17e06 235 PANTHER PTHR31760 15 232 1.3E-60 T 22-04-2016 RMET_RS17610 e008dc6d92b6f3581ae49dd2f4d17e06 235 Gene3D G3DSA:3.40.50.150 11 234 6.4E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS17610 e008dc6d92b6f3581ae49dd2f4d17e06 235 Pfam PF02527 rRNA small subunit methyltransferase G 35 221 8.4E-45 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RMET_RS17610 e008dc6d92b6f3581ae49dd2f4d17e06 235 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 26 231 25.02 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RMET_RS17610 e008dc6d92b6f3581ae49dd2f4d17e06 235 PIRSF PIRSF003078 12 235 1.6E-53 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RMET_RS17610 e008dc6d92b6f3581ae49dd2f4d17e06 235 SUPERFAMILY SSF53335 20 233 2.76E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS17610 e008dc6d92b6f3581ae49dd2f4d17e06 235 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 39 233 3.0E-44 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RMET_RS03040 10619acfa4b55b76e885f0abe981c9d5 459 SUPERFAMILY SSF111369 112 350 1.57E-63 T 22-04-2016 RMET_RS03040 10619acfa4b55b76e885f0abe981c9d5 459 Pfam PF13533 Biotin-lipoyl like 120 166 4.9E-14 T 22-04-2016 RMET_RS03040 10619acfa4b55b76e885f0abe981c9d5 459 PANTHER PTHR30469 48 435 3.5E-131 T 22-04-2016 RMET_RS03040 10619acfa4b55b76e885f0abe981c9d5 459 PANTHER PTHR30469:SF0 48 435 3.5E-131 T 22-04-2016 RMET_RS03040 10619acfa4b55b76e885f0abe981c9d5 459 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 95 423 3.6E-77 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS03040 10619acfa4b55b76e885f0abe981c9d5 459 Gene3D G3DSA:2.40.50.100 119 153 2.3E-22 T 22-04-2016 RMET_RS03040 10619acfa4b55b76e885f0abe981c9d5 459 Gene3D G3DSA:2.40.50.100 228 262 2.3E-22 T 22-04-2016 RMET_RS10895 6cf044b2fead6db4d6f1e277c1777b11 464 Pfam PF00589 Phage integrase family 214 417 1.9E-14 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS10895 6cf044b2fead6db4d6f1e277c1777b11 464 Gene3D G3DSA:1.10.443.10 207 289 1.8E-22 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS10895 6cf044b2fead6db4d6f1e277c1777b11 464 Gene3D G3DSA:1.10.443.10 325 429 1.8E-22 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS10895 6cf044b2fead6db4d6f1e277c1777b11 464 Gene3D G3DSA:1.10.150.130 27 129 1.8E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS10895 6cf044b2fead6db4d6f1e277c1777b11 464 SUPERFAMILY SSF56349 209 420 2.5E-21 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 PANTHER PTHR11958:SF49 3 419 8.5E-242 T 22-04-2016 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 Gene3D G3DSA:1.10.3860.10 6 407 2.5E-115 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 296 319 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 37 52 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 Pfam PF00375 Sodium:dicarboxylate symporter family 10 402 1.9E-110 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 PANTHER PTHR11958 3 419 8.5E-242 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 SUPERFAMILY SSF118215 10 403 2.75E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 429 38.846 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 8.5E-22 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 8.5E-22 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 8.5E-22 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 8.5E-22 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS01160 7c1497249d935ac26e7c8b26710313a4 430 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 8.5E-22 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS10510 b536de65a4a36098c77f0339516cffe0 447 TIGRFAM TIGR01933 hflK: HflK protein 123 400 2.5E-89 T 22-04-2016 IPR010201 HflK GO:0016021 RMET_RS10510 b536de65a4a36098c77f0339516cffe0 447 SUPERFAMILY SSF117892 182 305 5.36E-21 T 22-04-2016 IPR001107 Band 7 domain RMET_RS10510 b536de65a4a36098c77f0339516cffe0 447 Pfam PF12221 Bacterial membrane protein N terminal 31 83 2.5E-12 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal RMET_RS10510 b536de65a4a36098c77f0339516cffe0 447 PANTHER PTHR10264 34 437 2.7E-110 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS10510 b536de65a4a36098c77f0339516cffe0 447 SMART SM00244 121 298 2.4E-21 T 22-04-2016 IPR001107 Band 7 domain RMET_RS10510 b536de65a4a36098c77f0339516cffe0 447 PANTHER PTHR10264:SF51 34 437 2.7E-110 T 22-04-2016 IPR010201 HflK GO:0016021 RMET_RS10510 b536de65a4a36098c77f0339516cffe0 447 Pfam PF01145 SPFH domain / Band 7 family 125 314 4.5E-29 T 22-04-2016 IPR001107 Band 7 domain RMET_RS14375 ed84a6261701a498745b6a8274ff6831 401 PANTHER PTHR30483:SF20 32 390 1.3E-87 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS14375 ed84a6261701a498745b6a8274ff6831 401 SUPERFAMILY SSF53822 51 394 4.71E-97 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS14375 ed84a6261701a498745b6a8274ff6831 401 PANTHER PTHR30483 32 390 1.3E-87 T 22-04-2016 RMET_RS14375 ed84a6261701a498745b6a8274ff6831 401 Pfam PF13458 Periplasmic binding protein 51 389 2.5E-61 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS14375 ed84a6261701a498745b6a8274ff6831 401 Gene3D G3DSA:3.40.50.2300 51 251 1.2E-67 T 22-04-2016 RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 Gene3D G3DSA:1.20.1560.10 31 334 2.9E-34 T 22-04-2016 RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 SUPERFAMILY SSF52540 351 602 2.27E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 SMART SM00382 387 578 4.5E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 Pfam PF00664 ABC transporter transmembrane region 43 301 1.5E-15 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 SUPERFAMILY SSF90123 29 348 8.11E-48 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 PANTHER PTHR24221 4 606 0.0 T 22-04-2016 RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 Pfam PF00005 ABC transporter 379 532 4.9E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 PANTHER PTHR24221:SF203 4 606 0.0 T 22-04-2016 RMET_RS12615 4500d78ce34a7f71c5f41643094e76af 610 Gene3D G3DSA:3.40.50.300 362 597 1.9E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05260 19aea48fab489a0c2e6e6f51db2b3ac0 171 SUPERFAMILY SSF52540 1 157 1.48E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05260 19aea48fab489a0c2e6e6f51db2b3ac0 171 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 3 156 6.3E-49 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 RMET_RS05260 19aea48fab489a0c2e6e6f51db2b3ac0 171 Pfam PF01202 Shikimate kinase 9 159 3.6E-13 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05260 19aea48fab489a0c2e6e6f51db2b3ac0 171 Gene3D G3DSA:3.40.50.300 1 158 1.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05260 19aea48fab489a0c2e6e6f51db2b3ac0 171 PANTHER PTHR11603 1 157 1.1E-70 T 22-04-2016 RMET_RS13270 d2d40a356cd3c2886309d4e77277c9b3 735 PANTHER PTHR30441:SF2 1 660 3.5E-92 T 22-04-2016 RMET_RS13270 d2d40a356cd3c2886309d4e77277c9b3 735 Pfam PF05170 AsmA family 6 587 2.3E-104 T 22-04-2016 IPR007844 AsmA RMET_RS13270 d2d40a356cd3c2886309d4e77277c9b3 735 PANTHER PTHR30441 1 660 3.5E-92 T 22-04-2016 RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 Pfam PF00005 ABC transporter 21 169 4.3E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 SUPERFAMILY SSF55021 248 343 1.72E-24 T 22-04-2016 RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 Gene3D G3DSA:3.40.50.300 1 236 1.1E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 SMART SM00930 265 340 2.0E-30 T 22-04-2016 IPR018449 NIL domain RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 SMART SM00382 30 227 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 SUPERFAMILY SSF52540 1 239 1.36E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 PANTHER PTHR24220 3 341 9.9E-144 T 22-04-2016 RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 Gene3D G3DSA:3.30.70.260 237 343 2.7E-31 T 22-04-2016 RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 Pfam PF09383 NIL domain 268 339 2.9E-23 T 22-04-2016 IPR018449 NIL domain RMET_RS03690 b4d23481c14d5f712701f0f707d9d480 344 PANTHER PTHR24220:SF455 3 341 9.9E-144 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 PANTHER PTHR26402 11 132 3.2E-36 T 22-04-2016 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 Gene3D G3DSA:3.40.50.2300 13 137 3.0E-28 T 22-04-2016 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 SMART SM00448 11 132 9.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 Pfam PF02954 Bacterial regulatory protein, Fis family 153 192 2.4E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 PANTHER PTHR26402:SF344 11 132 3.2E-36 T 22-04-2016 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 Gene3D G3DSA:1.10.10.60 142 195 2.8E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 SUPERFAMILY SSF52172 13 181 2.49E-26 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 176 196 1.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 159 176 1.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS00690 4effb71545f010647ac9a200d50b990e 197 Pfam PF00072 Response regulator receiver domain 14 132 2.5E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS07250 6ba43ba7ea4e1a6d721d1ee4e5ea2ab0 256 SUPERFAMILY SSF64005 14 237 2.22E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RMET_RS07250 6ba43ba7ea4e1a6d721d1ee4e5ea2ab0 256 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 241 1.6E-90 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RMET_RS07250 6ba43ba7ea4e1a6d721d1ee4e5ea2ab0 256 PANTHER PTHR10291 16 254 7.7E-117 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RMET_RS07250 6ba43ba7ea4e1a6d721d1ee4e5ea2ab0 256 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 241 1.2E-79 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RMET_RS07250 6ba43ba7ea4e1a6d721d1ee4e5ea2ab0 256 Gene3D G3DSA:3.40.1180.10 12 247 5.3E-97 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RMET_RS07250 6ba43ba7ea4e1a6d721d1ee4e5ea2ab0 256 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 242 40.651 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RMET_RS07250 6ba43ba7ea4e1a6d721d1ee4e5ea2ab0 256 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 187 204 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 RMET_RS06185 f3c58a47366e46cfb8ff19ffb336fac3 271 PANTHER PTHR10992:SF854 1 265 1.6E-30 T 22-04-2016 RMET_RS06185 f3c58a47366e46cfb8ff19ffb336fac3 271 PANTHER PTHR10992 1 265 1.6E-30 T 22-04-2016 RMET_RS06185 f3c58a47366e46cfb8ff19ffb336fac3 271 SUPERFAMILY SSF53474 15 264 2.36E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06185 f3c58a47366e46cfb8ff19ffb336fac3 271 Gene3D G3DSA:3.40.50.1820 9 264 2.4E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06185 f3c58a47366e46cfb8ff19ffb336fac3 271 Pfam PF12697 Alpha/beta hydrolase family 32 257 1.4E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS29975 09b0187283c7bdf7b7d92e78371375a0 70 SUPERFAMILY SSF53474 1 70 3.04E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS29975 09b0187283c7bdf7b7d92e78371375a0 70 Gene3D G3DSA:3.40.50.1820 2 70 1.7E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS02070 b6bd8ebdd48dc2f34ecef426d73f1da6 142 PANTHER PTHR11545 1 142 2.5E-74 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RMET_RS02070 b6bd8ebdd48dc2f34ecef426d73f1da6 142 SUPERFAMILY SSF52161 1 140 2.49E-59 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RMET_RS02070 b6bd8ebdd48dc2f34ecef426d73f1da6 142 Gene3D G3DSA:3.90.1180.10 3 141 7.0E-64 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RMET_RS02070 b6bd8ebdd48dc2f34ecef426d73f1da6 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.1E-62 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 RMET_RS02070 b6bd8ebdd48dc2f34ecef426d73f1da6 142 Pfam PF00572 Ribosomal protein L13 15 138 1.7E-54 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RMET_RS02070 b6bd8ebdd48dc2f34ecef426d73f1da6 142 PIRSF PIRSF002181 1 142 8.1E-48 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RMET_RS02070 b6bd8ebdd48dc2f34ecef426d73f1da6 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.529 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RMET_RS14960 7bf628144d7236f2a745303ed737e90f 209 SUPERFAMILY SSF140804 99 207 4.84E-27 T 22-04-2016 IPR027405 YidB-like RMET_RS14960 7bf628144d7236f2a745303ed737e90f 209 Gene3D G3DSA:1.10.10.690 99 207 1.6E-23 T 22-04-2016 IPR027405 YidB-like RMET_RS14960 7bf628144d7236f2a745303ed737e90f 209 Pfam PF06078 Bacterial protein of unknown function (DUF937) 71 201 7.5E-11 T 22-04-2016 IPR009282 Protein of unknown function DUF937 RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 SUPERFAMILY SSF48008 105 241 1.39E-30 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 SMART SM00345 23 82 2.4E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 SMART SM00895 108 233 1.4E-25 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 Gene3D G3DSA:1.10.10.10 15 87 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 PANTHER PTHR11751 21 89 2.2E-29 T 22-04-2016 RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 PANTHER PTHR11751 106 124 2.2E-29 T 22-04-2016 RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 Gene3D G3DSA:1.20.120.530 102 242 4.9E-33 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 Pfam PF07729 FCD domain 109 232 2.0E-27 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 3.4E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS04175 f4afb9059e7a3a1dbce7f5cf147acc3d 249 SUPERFAMILY SSF46785 15 86 2.87E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14810 7f4f23e32adc6336f46054144203d042 191 Pfam PF04264 YceI-like domain 29 185 3.0E-32 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS14810 7f4f23e32adc6336f46054144203d042 191 SUPERFAMILY SSF101874 29 185 1.1E-38 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS14810 7f4f23e32adc6336f46054144203d042 191 Gene3D G3DSA:2.40.128.110 29 185 1.9E-40 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS14810 7f4f23e32adc6336f46054144203d042 191 PANTHER PTHR34406 3 185 2.3E-26 T 22-04-2016 RMET_RS14810 7f4f23e32adc6336f46054144203d042 191 SMART SM00867 27 187 2.4E-41 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS14810 7f4f23e32adc6336f46054144203d042 191 PANTHER PTHR34406:SF1 3 185 2.3E-26 T 22-04-2016 RMET_RS17435 a12df6c008200948325257a8074ce4ec 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 263 4.7E-50 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS17435 a12df6c008200948325257a8074ce4ec 264 PANTHER PTHR11941:SF28 1 262 5.0E-120 T 22-04-2016 RMET_RS17435 a12df6c008200948325257a8074ce4ec 264 SUPERFAMILY SSF52096 11 263 1.12E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS17435 a12df6c008200948325257a8074ce4ec 264 Gene3D G3DSA:3.90.226.10 12 206 2.8E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS17435 a12df6c008200948325257a8074ce4ec 264 PANTHER PTHR11941 1 262 5.0E-120 T 22-04-2016 RMET_RS17435 a12df6c008200948325257a8074ce4ec 264 Gene3D G3DSA:1.10.12.10 208 263 2.0E-16 T 22-04-2016 IPR014748 Crontonase, C-terminal RMET_RS10410 915bb205159d281b14298c68a4b849f9 149 Gene3D G3DSA:1.10.10.10 2 55 3.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10410 915bb205159d281b14298c68a4b849f9 149 PANTHER PTHR30154 4 148 4.1E-34 T 22-04-2016 RMET_RS10410 915bb205159d281b14298c68a4b849f9 149 SMART SM00344 4 111 0.0023 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RMET_RS10410 915bb205159d281b14298c68a4b849f9 149 PANTHER PTHR30154:SF21 4 148 4.1E-34 T 22-04-2016 RMET_RS10410 915bb205159d281b14298c68a4b849f9 149 Pfam PF13404 AsnC-type helix-turn-helix domain 4 46 5.2E-8 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 SUPERFAMILY SSF50331 237 363 2.81E-25 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 Gene3D G3DSA:2.40.50.140 290 346 6.3E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 PANTHER PTHR24220:SF151 285 315 3.0E-166 T 22-04-2016 RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 PANTHER PTHR24220:SF151 5 267 3.0E-166 T 22-04-2016 RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 Pfam PF08402 TOBE domain 286 355 3.8E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 Gene3D G3DSA:3.40.50.300 4 235 1.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 SMART SM00382 29 220 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 SUPERFAMILY SSF52540 4 245 7.84E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 Pfam PF00005 ABC transporter 21 162 7.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 PANTHER PTHR24220 285 315 3.0E-166 T 22-04-2016 RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 PANTHER PTHR24220 5 267 3.0E-166 T 22-04-2016 RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 Gene3D G3DSA:2.40.50.100 281 289 3.9E-4 T 22-04-2016 RMET_RS10265 50fa73c19c03302d4b4826ed9cd63efc 367 Gene3D G3DSA:2.40.50.100 349 363 3.9E-4 T 22-04-2016 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 SUPERFAMILY SSF63867 335 408 2.09E-14 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 Gene3D G3DSA:3.90.105.10 135 166 8.3E-21 T 22-04-2016 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 SUPERFAMILY SSF63882 10 179 1.19E-48 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 Pfam PF03454 MoeA C-terminal region (domain IV) 340 406 1.7E-10 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 SUPERFAMILY SSF53218 181 331 1.7E-41 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 171 2.8E-32 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 Gene3D G3DSA:3.40.980.10 167 339 1.6E-63 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 SMART SM00852 184 326 8.1E-45 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 PANTHER PTHR10192 1 410 1.8E-133 T 22-04-2016 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 Pfam PF00994 Probable molybdopterin binding domain 184 324 8.4E-25 T 22-04-2016 IPR001453 MoaB/Mog domain RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 Gene3D G3DSA:2.170.190.11 54 134 1.0E-26 T 22-04-2016 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 PANTHER PTHR10192:SF17 1 410 1.8E-133 T 22-04-2016 RMET_RS09845 7971e70bfa8a0023e2e65682ba292b26 411 Gene3D G3DSA:2.40.340.10 340 406 1.6E-8 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RMET_RS00875 9cd1bfea7129fd2ca150f595e78bd2ab 276 Gene3D G3DSA:3.20.20.220 3 276 4.8E-113 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RMET_RS00875 9cd1bfea7129fd2ca150f595e78bd2ab 276 PANTHER PTHR21091:SF31 133 264 3.8E-45 T 22-04-2016 RMET_RS00875 9cd1bfea7129fd2ca150f595e78bd2ab 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 275 1.1E-104 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RMET_RS00875 9cd1bfea7129fd2ca150f595e78bd2ab 276 Pfam PF02219 Methylenetetrahydrofolate reductase 5 274 5.8E-95 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RMET_RS00875 9cd1bfea7129fd2ca150f595e78bd2ab 276 SUPERFAMILY SSF51730 4 275 2.16E-102 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RMET_RS00875 9cd1bfea7129fd2ca150f595e78bd2ab 276 PANTHER PTHR21091 133 264 3.8E-45 T 22-04-2016 RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 SUPERFAMILY SSF46689 2 80 5.13E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 3.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 SUPERFAMILY SSF48498 89 199 1.33E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 PANTHER PTHR30055 1 198 2.4E-20 T 22-04-2016 RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 Gene3D G3DSA:1.10.10.60 4 61 7.5E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 Gene3D G3DSA:1.10.357.10 62 200 1.6E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS16955 7912a0bcbe29b2afee326f0d6a27521f 206 PANTHER PTHR30055:SF27 1 198 2.4E-20 T 22-04-2016 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 PANTHER PTHR15680 2 124 9.2E-55 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 Pfam PF01245 Ribosomal protein L19 2 117 3.1E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 8.4E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 PIRSF PIRSF002191 1 130 1.5E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 SUPERFAMILY SSF50104 1 118 3.61E-45 T 22-04-2016 IPR008991 Translation protein SH3-like domain RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.3E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.3E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.3E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS03770 f9b168c5273ed192fe4c8970d5c62404 130 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 118 30.33 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS10505 ffbea8d09794e766a4f4fa435aa7a3c7 300 Pfam PF01145 SPFH domain / Band 7 family 24 199 1.7E-30 T 22-04-2016 IPR001107 Band 7 domain RMET_RS10505 ffbea8d09794e766a4f4fa435aa7a3c7 300 PANTHER PTHR10264:SF80 1 287 2.8E-74 T 22-04-2016 RMET_RS10505 ffbea8d09794e766a4f4fa435aa7a3c7 300 PANTHER PTHR10264 1 287 2.8E-74 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS10505 ffbea8d09794e766a4f4fa435aa7a3c7 300 SMART SM00244 20 185 1.0E-26 T 22-04-2016 IPR001107 Band 7 domain RMET_RS10505 ffbea8d09794e766a4f4fa435aa7a3c7 300 SUPERFAMILY SSF117892 54 191 8.89E-27 T 22-04-2016 IPR001107 Band 7 domain RMET_RS10505 ffbea8d09794e766a4f4fa435aa7a3c7 300 PIRSF PIRSF005651 1 294 7.6E-88 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RMET_RS10505 ffbea8d09794e766a4f4fa435aa7a3c7 300 TIGRFAM TIGR01932 hflC: HflC protein 142 284 1.5E-47 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RMET_RS08320 015c1cbe7bd0d60faaefe69a2fd74c74 133 PANTHER PTHR37482 38 122 1.2E-25 T 22-04-2016 RMET_RS08320 015c1cbe7bd0d60faaefe69a2fd74c74 133 Pfam PF04355 SmpA / OmlA family 45 114 2.9E-26 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RMET_RS08320 015c1cbe7bd0d60faaefe69a2fd74c74 133 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 5 132 27.79 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE RMET_RS08320 015c1cbe7bd0d60faaefe69a2fd74c74 133 PANTHER PTHR37482:SF1 38 122 1.2E-25 T 22-04-2016 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 Pfam PF03466 LysR substrate binding domain 96 297 4.2E-26 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 Gene3D G3DSA:1.10.10.10 1 86 6.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 PANTHER PTHR30118:SF4 1 307 7.2E-114 T 22-04-2016 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 SUPERFAMILY SSF46785 2 85 2.87E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 Gene3D G3DSA:3.40.190.10 273 301 3.6E-27 T 22-04-2016 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 Gene3D G3DSA:3.40.190.10 90 172 3.6E-27 T 22-04-2016 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 Gene3D G3DSA:3.40.190.10 173 269 2.0E-32 T 22-04-2016 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 SUPERFAMILY SSF53850 90 295 2.71E-44 T 22-04-2016 RMET_RS04875 96fbd4306845c3d5b0c152e710ff21f0 313 PANTHER PTHR30118 1 307 7.2E-114 T 22-04-2016 RMET_RS10400 44bf11c6607770da7734c99a7b87c4ca 117 SUPERFAMILY SSF46626 6 108 6.26E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10400 44bf11c6607770da7734c99a7b87c4ca 117 Gene3D G3DSA:1.10.760.10 16 108 8.8E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS10400 44bf11c6607770da7734c99a7b87c4ca 117 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 38 103 1.8E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 SMART SM00382 560 689 1.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 SMART SM00382 312 452 4.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 Gene3D G3DSA:3.40.50.300 554 697 6.9E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 Gene3D G3DSA:3.40.50.300 302 470 5.8E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 PANTHER PTHR23077 417 677 2.1E-22 T 22-04-2016 RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 PANTHER PTHR23077 316 401 2.1E-22 T 22-04-2016 RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 SUPERFAMILY SSF52540 297 495 2.15E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 SUPERFAMILY SSF52540 549 698 6.48E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 316 448 1.1E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 564 686 1.1E-30 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 PANTHER PTHR23077:SF55 417 677 2.1E-22 T 22-04-2016 RMET_RS11425 2ffda34ffda62034d1dceff7b00fde81 771 PANTHER PTHR23077:SF55 316 401 2.1E-22 T 22-04-2016 RMET_RS12410 872b205947969401f58d2abc4d2c08b5 216 Pfam PF00694 Aconitase C-terminal domain 1 131 8.0E-38 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12410 872b205947969401f58d2abc4d2c08b5 216 SUPERFAMILY SSF52016 1 201 3.73E-63 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS12410 872b205947969401f58d2abc4d2c08b5 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.414 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12410 872b205947969401f58d2abc4d2c08b5 216 PANTHER PTHR11670:SF27 1 208 1.9E-103 T 22-04-2016 RMET_RS12410 872b205947969401f58d2abc4d2c08b5 216 Gene3D G3DSA:3.20.19.10 1 204 9.6E-53 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS12410 872b205947969401f58d2abc4d2c08b5 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 3.2E-81 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12410 872b205947969401f58d2abc4d2c08b5 216 PANTHER PTHR11670 1 208 1.9E-103 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01000 3c4163a9c68882a11b2623d90d5347ed 147 Gene3D G3DSA:3.40.630.30 5 138 5.2E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS01000 3c4163a9c68882a11b2623d90d5347ed 147 SUPERFAMILY SSF55729 4 118 1.86E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS01000 3c4163a9c68882a11b2623d90d5347ed 147 Pfam PF00583 Acetyltransferase (GNAT) family 43 113 1.6E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 PANTHER PTHR11766:SF1 18 412 7.1E-221 T 22-04-2016 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 16 412 47.102 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 Pfam PF01479 S4 domain 354 396 3.6E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 70 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 Pfam PF00579 tRNA synthetases class I (W and Y) 51 331 1.5E-73 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 22 411 2.1E-119 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 SUPERFAMILY SSF52374 22 330 5.0E-89 T 22-04-2016 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 SMART SM00363 352 413 2.8E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 SUPERFAMILY SSF55174 334 409 7.59E-19 T 22-04-2016 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 Gene3D G3DSA:3.40.50.620 23 245 5.3E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 PANTHER PTHR11766 18 412 7.1E-221 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 229 241 7.6E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 64 86 7.6E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 196 218 7.6E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 179 194 7.6E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 Gene3D G3DSA:3.10.290.10 344 412 9.0E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS02105 764b9f3407ee6d054b5680feadf7ded3 413 Gene3D G3DSA:1.10.240.10 246 343 1.3E-34 T 22-04-2016 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 Gene3D G3DSA:3.40.50.970 295 494 4.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 282 2.5E-119 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 Gene3D G3DSA:3.40.50.970 12 186 5.5E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 Gene3D G3DSA:3.40.50.970 228 294 5.5E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 622 4.8E-262 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 SUPERFAMILY SSF52922 492 624 6.94E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 Pfam PF02779 Transketolase, pyrimidine binding domain 320 478 2.0E-39 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 Pfam PF02780 Transketolase, C-terminal domain 506 616 2.1E-27 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 PANTHER PTHR11624:SF20 237 636 0.0 T 22-04-2016 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 PANTHER PTHR11624:SF20 19 214 0.0 T 22-04-2016 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 SUPERFAMILY SSF52518 316 503 8.66E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 PANTHER PTHR11624 237 636 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 PANTHER PTHR11624 19 214 0.0 T 22-04-2016 IPR033247 Transketolase family RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 625 46.72 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 SUPERFAMILY SSF52518 239 381 2.66E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 SUPERFAMILY SSF52518 3 195 2.66E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 SMART SM00861 319 483 6.8E-71 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RMET_RS13145 a52e0961996b2434e0914f2a7ee98c36 637 Gene3D G3DSA:3.40.50.920 495 623 1.2E-36 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RMET_RS15195 1d54d750273be21bf304ef5d20ccaf43 688 PANTHER PTHR33375:SF2 31 680 2.1E-86 T 22-04-2016 RMET_RS15195 1d54d750273be21bf304ef5d20ccaf43 688 SMART SM00470 29 127 2.0E-16 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS15195 1d54d750273be21bf304ef5d20ccaf43 688 SUPERFAMILY SSF109709 121 224 1.23E-18 T 22-04-2016 RMET_RS15195 1d54d750273be21bf304ef5d20ccaf43 688 SUPERFAMILY SSF110849 38 129 1.83E-13 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS15195 1d54d750273be21bf304ef5d20ccaf43 688 Gene3D G3DSA:3.90.1530.10 24 132 1.9E-16 T 22-04-2016 RMET_RS15195 1d54d750273be21bf304ef5d20ccaf43 688 PANTHER PTHR33375 31 680 2.1E-86 T 22-04-2016 RMET_RS15195 1d54d750273be21bf304ef5d20ccaf43 688 Pfam PF02195 ParB-like nuclease domain 31 126 5.6E-12 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 PIRSF PIRSF000429 1 392 6.7E-64 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 Gene3D G3DSA:3.40.47.10 254 390 2.0E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 Gene3D G3DSA:3.40.47.10 153 188 2.0E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 Gene3D G3DSA:3.40.47.10 20 117 1.1E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 Gene3D G3DSA:3.40.47.10 209 228 1.1E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 Pfam PF00108 Thiolase, N-terminal domain 20 191 2.1E-17 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 Pfam PF02803 Thiolase, C-terminal domain 272 364 4.2E-10 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 PANTHER PTHR18919 1 394 2.0E-161 T 22-04-2016 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 PANTHER PTHR18919:SF83 1 394 2.0E-161 T 22-04-2016 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 ProSitePatterns PS00737 Thiolases signature 2. 334 350 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 SUPERFAMILY SSF53901 7 237 9.52E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS12695 b25f945a213c73fd415b2ee39846285e 395 SUPERFAMILY SSF53901 236 392 3.95E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RMET_RS00395 2337f918587136431d76cedd34319a40 163 PANTHER PTHR10739 31 161 1.1E-33 T 22-04-2016 RMET_RS00395 2337f918587136431d76cedd34319a40 163 Pfam PF01467 Cytidylyltransferase-like 33 132 8.5E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RMET_RS00395 2337f918587136431d76cedd34319a40 163 PANTHER PTHR10739:SF26 31 161 1.1E-33 T 22-04-2016 RMET_RS00395 2337f918587136431d76cedd34319a40 163 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 21 161 1.4E-59 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RMET_RS00395 2337f918587136431d76cedd34319a40 163 Gene3D G3DSA:3.40.50.620 30 147 7.2E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS00395 2337f918587136431d76cedd34319a40 163 SUPERFAMILY SSF52374 29 156 1.13E-20 T 22-04-2016 RMET_RS00395 2337f918587136431d76cedd34319a40 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 31 96 6.7E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 PANTHER PTHR10617:SF52 75 394 4.5E-165 T 22-04-2016 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 PANTHER PTHR10617:SF52 474 538 4.5E-165 T 22-04-2016 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 PANTHER PTHR10617 75 394 4.5E-165 T 22-04-2016 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 PANTHER PTHR10617 474 538 4.5E-165 T 22-04-2016 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 Pfam PF01593 Flavin containing amine oxidoreductase 216 270 3.4E-4 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 SUPERFAMILY SSF51905 481 533 1.05E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 SUPERFAMILY SSF51905 104 290 1.05E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 Gene3D G3DSA:3.50.50.60 104 292 2.8E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 Gene3D G3DSA:3.50.50.60 457 535 2.8E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS04380 31b81638ada442fba6f76fb33d4677b9 539 PIRSF PIRSF038984 1 539 1.5E-243 T 22-04-2016 IPR028348 FAD dependent protein RMET_RS11025 9f132d394f0646355c17fad13de89003 137 PANTHER PTHR11803 1 134 6.4E-52 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RMET_RS11025 9f132d394f0646355c17fad13de89003 137 Pfam PF01042 Endoribonuclease L-PSP 28 133 1.7E-19 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RMET_RS11025 9f132d394f0646355c17fad13de89003 137 PANTHER PTHR11803:SF16 1 134 6.4E-52 T 22-04-2016 RMET_RS11025 9f132d394f0646355c17fad13de89003 137 Gene3D G3DSA:3.30.1330.40 6 134 2.5E-34 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RMET_RS11025 9f132d394f0646355c17fad13de89003 137 SUPERFAMILY SSF55298 4 134 1.02E-29 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RMET_RS13605 0c71c31f01cdceded6d924e42bd63ab5 217 PANTHER PTHR11579 1 170 2.5E-33 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RMET_RS13605 0c71c31f01cdceded6d924e42bd63ab5 217 Gene3D G3DSA:3.40.50.150 2 214 3.5E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS13605 0c71c31f01cdceded6d924e42bd63ab5 217 SUPERFAMILY SSF53335 1 179 9.43E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS13605 0c71c31f01cdceded6d924e42bd63ab5 217 PANTHER PTHR11579:SF0 1 170 2.5E-33 T 22-04-2016 RMET_RS13605 0c71c31f01cdceded6d924e42bd63ab5 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 192 2.4E-35 T 22-04-2016 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 Gene3D G3DSA:3.30.540.10 4 194 1.8E-77 T 22-04-2016 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 Gene3D G3DSA:3.40.190.80 197 333 3.1E-59 T 22-04-2016 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 333 47.98 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 SUPERFAMILY SSF56655 3 331 5.34E-119 T 22-04-2016 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PANTHER PTHR11556 4 338 1.4E-160 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PIRSF PIRSF500210 1 336 2.2E-130 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PIRSF PIRSF000904 1 337 6.9E-129 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 193 2.1E-63 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 9.4E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 9.4E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 9.4E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 9.4E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 9.4E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS04410 9f98bb232cfa73c29536c7bda12b0ae4 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 9.4E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 PANTHER PTHR11908 147 743 1.4E-170 T 22-04-2016 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 Gene3D G3DSA:3.30.365.10 62 207 9.9E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 SMART SM01008 226 309 1.1E-12 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 26 55 6.4E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 Gene3D G3DSA:3.30.365.10 411 582 1.3E-27 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 Gene3D G3DSA:3.30.365.10 583 747 2.2E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 43 198 1.2E-11 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 619 702 1.2E-9 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 328 580 1.1E-26 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 PANTHER PTHR11908:SF79 147 743 1.4E-170 T 22-04-2016 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 PIRSF PIRSF036389 17 750 4.1E-221 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 SUPERFAMILY SSF56003 333 747 1.14E-111 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 SUPERFAMILY SSF56003 35 259 1.43E-39 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RMET_RS03005 a5727bec00f3b5e219b8683c615c1dd3 750 Gene3D G3DSA:3.90.1170.50 208 307 6.1E-19 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RMET_RS09865 7cc729a9e732127ae2496e437f3ccea6 126 Gene3D G3DSA:3.40.1230.10 1 122 2.2E-45 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RMET_RS09865 7cc729a9e732127ae2496e437f3ccea6 126 PANTHER PTHR21192 17 122 9.2E-28 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RMET_RS09865 7cc729a9e732127ae2496e437f3ccea6 126 PANTHER PTHR21192:SF3 17 122 9.2E-28 T 22-04-2016 RMET_RS09865 7cc729a9e732127ae2496e437f3ccea6 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 1.5E-33 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RMET_RS09865 7cc729a9e732127ae2496e437f3ccea6 126 SUPERFAMILY SSF64076 2 122 3.79E-38 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RMET_RS12095 62a9468d882363936acd207f133d794f 383 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 6 379 4.2E-152 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RMET_RS12095 62a9468d882363936acd207f133d794f 383 PIRSF PIRSF015557 1 383 3.3E-154 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RMET_RS12095 62a9468d882363936acd207f133d794f 383 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 6 379 2.2E-153 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 SUPERFAMILY SSF53633 9 259 4.32E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 Gene3D G3DSA:3.40.1160.10 4 258 1.2E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 Pfam PF01472 PUA domain 281 355 3.6E-24 T 22-04-2016 IPR002478 PUA domain GO:0003723 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 PANTHER PTHR11063 1 372 7.5E-117 T 22-04-2016 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 4.6E-133 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 PIRSF PIRSF000729 4 372 8.8E-133 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 PANTHER PTHR11063:SF6 1 372 7.5E-117 T 22-04-2016 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 Gene3D G3DSA:2.30.130.10 278 370 1.1E-27 T 22-04-2016 IPR015947 PUA-like domain RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 SMART SM00359 281 364 3.8E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 SUPERFAMILY SSF88697 280 371 6.21E-25 T 22-04-2016 IPR015947 PUA-like domain RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 8.1E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 8.1E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 8.1E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 8.1E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 8.1E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 Pfam PF00696 Amino acid kinase family 9 237 6.0E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RMET_RS15535 011a38220f5087f5005370f31f6d6b21 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.4 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RMET_RS15100 744ed63268aa75d77ed873e9969c667b 183 PANTHER PTHR30529:SF3 2 183 2.1E-72 T 22-04-2016 RMET_RS15100 744ed63268aa75d77ed873e9969c667b 183 PANTHER PTHR30529 2 183 2.1E-72 T 22-04-2016 RMET_RS15100 744ed63268aa75d77ed873e9969c667b 183 SUPERFAMILY SSF81342 5 182 2.75E-33 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RMET_RS15100 744ed63268aa75d77ed873e9969c667b 183 Pfam PF01292 Prokaryotic cytochrome b561 9 180 9.5E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RMET_RS04890 71395a86e68fad700c626e6a58f497e5 358 Gene3D G3DSA:3.90.1200.10 124 324 1.6E-30 T 22-04-2016 RMET_RS04890 71395a86e68fad700c626e6a58f497e5 358 PANTHER PTHR12725 75 209 1.3E-15 T 22-04-2016 RMET_RS04890 71395a86e68fad700c626e6a58f497e5 358 SUPERFAMILY SSF56112 3 325 6.68E-59 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS04890 71395a86e68fad700c626e6a58f497e5 358 PANTHER PTHR12725:SF80 75 209 1.3E-15 T 22-04-2016 RMET_RS04890 71395a86e68fad700c626e6a58f497e5 358 Pfam PF01636 Phosphotransferase enzyme family 41 277 6.8E-56 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RMET_RS05095 54f491e807eb40d4111d2cbdde1f41c2 209 PANTHER PTHR30055 13 80 8.4E-19 T 22-04-2016 RMET_RS05095 54f491e807eb40d4111d2cbdde1f41c2 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 3.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS05095 54f491e807eb40d4111d2cbdde1f41c2 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 3.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS05095 54f491e807eb40d4111d2cbdde1f41c2 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 75 5.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS05095 54f491e807eb40d4111d2cbdde1f41c2 209 PANTHER PTHR30055:SF45 13 80 8.4E-19 T 22-04-2016 RMET_RS05095 54f491e807eb40d4111d2cbdde1f41c2 209 SUPERFAMILY SSF46689 20 88 2.18E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS05095 54f491e807eb40d4111d2cbdde1f41c2 209 Gene3D G3DSA:1.10.357.10 4 201 3.1E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 SUPERFAMILY SSF53720 21 502 6.28E-161 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 Gene3D G3DSA:3.40.309.10 285 474 2.0E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 270 277 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 Gene3D G3DSA:3.40.605.10 22 284 9.2E-91 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 PANTHER PTHR11699 3 503 2.3E-214 T 22-04-2016 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 298 309 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 Pfam PF00171 Aldehyde dehydrogenase family 36 499 4.2E-159 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 PANTHER PTHR11699:SF213 3 503 2.3E-214 T 22-04-2016 RMET_RS06670 c4f4691d878154752db380d90bd81324 503 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 23 503 4.0E-272 T 22-04-2016 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.6E-92 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 Pfam PF07650 KH domain 38 110 2.9E-21 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 SUPERFAMILY SSF54814 2 106 1.96E-36 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 Gene3D G3DSA:3.30.300.20 17 107 3.6E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.2E-40 T 22-04-2016 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 PANTHER PTHR11760:SF19 2 236 7.2E-127 T 22-04-2016 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 Gene3D G3DSA:3.30.1140.32 108 206 1.1E-45 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 SUPERFAMILY SSF54821 108 206 1.96E-39 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 SMART SM00322 60 125 2.0E-8 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 PANTHER PTHR11760 2 236 7.2E-127 T 22-04-2016 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.504 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RMET_RS16605 98798caad286b905e8ce2fcb98b84994 265 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 PRINTS PR01035 Tetracycline resistance protein signature 46 65 3.3E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 PRINTS PR01035 Tetracycline resistance protein signature 278 299 3.3E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 PRINTS PR01035 Tetracycline resistance protein signature 339 362 3.3E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 Gene3D G3DSA:1.20.1250.20 12 179 2.6E-20 T 22-04-2016 RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 Gene3D G3DSA:1.20.1250.20 213 383 7.6E-18 T 22-04-2016 RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 SUPERFAMILY SSF103473 11 385 1.31E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 PANTHER PTHR23517 9 381 8.8E-18 T 22-04-2016 RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 Pfam PF07690 Major Facilitator Superfamily 219 382 2.8E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS13275 729c8e5a4d48e6386ab0ce04ae841b1e 396 Pfam PF07690 Major Facilitator Superfamily 15 177 2.1E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS09695 bae631e55d3e79436d5886ec9905eab9 295 Gene3D G3DSA:1.10.3720.10 87 291 1.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS09695 bae631e55d3e79436d5886ec9905eab9 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 63 1.0E-11 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RMET_RS09695 bae631e55d3e79436d5886ec9905eab9 295 PANTHER PTHR30465:SF10 12 295 2.4E-102 T 22-04-2016 RMET_RS09695 bae631e55d3e79436d5886ec9905eab9 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 288 8.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS09695 bae631e55d3e79436d5886ec9905eab9 295 SUPERFAMILY SSF161098 90 277 6.05E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS09695 bae631e55d3e79436d5886ec9905eab9 295 PANTHER PTHR30465 12 295 2.4E-102 T 22-04-2016 RMET_RS03300 1438b3940ae3aa6610a0c8cedc91f219 418 Pfam PF09594 Protein of unknown function (DUF2029) 104 332 1.9E-37 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 SMART SM01329 2 351 2.4E-204 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 Gene3D G3DSA:3.40.718.10 2 355 4.1E-127 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 SUPERFAMILY SSF53659 2 355 1.69E-120 T 22-04-2016 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 355 50.682 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 350 1.2E-147 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 351 8.8E-131 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 PANTHER PTHR11835 1 355 9.7E-195 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RMET_RS12405 fb4ef09c29ddfba0a6d629b03a506486 355 PANTHER PTHR11835:SF35 1 355 9.7E-195 T 22-04-2016 RMET_RS03655 39de79a2acbb015efa406c8187fea21f 314 PANTHER PTHR10584:SF159 1 310 8.7E-113 T 22-04-2016 RMET_RS03655 39de79a2acbb015efa406c8187fea21f 314 SUPERFAMILY SSF53613 15 310 9.35E-57 T 22-04-2016 IPR029056 Ribokinase-like RMET_RS03655 39de79a2acbb015efa406c8187fea21f 314 Gene3D G3DSA:3.40.1190.20 15 310 6.7E-64 T 22-04-2016 IPR029056 Ribokinase-like RMET_RS03655 39de79a2acbb015efa406c8187fea21f 314 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 9 312 4.7E-124 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RMET_RS03655 39de79a2acbb015efa406c8187fea21f 314 PANTHER PTHR10584 1 310 8.7E-113 T 22-04-2016 RMET_RS03655 39de79a2acbb015efa406c8187fea21f 314 Pfam PF00294 pfkB family carbohydrate kinase 14 303 2.4E-44 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.481 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 PANTHER PTHR22926:SF5 2 152 8.1E-158 T 22-04-2016 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 PANTHER PTHR22926:SF5 175 389 8.1E-158 T 22-04-2016 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 PANTHER PTHR22926 2 152 8.1E-158 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 PANTHER PTHR22926 175 389 8.1E-158 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 78 8.2E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 40 389 7.7E-119 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15680 b7e37cce6994f1c5abd22e25e8a1d355 389 Pfam PF00953 Glycosyl transferase family 4 99 307 7.8E-34 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS02355 5aa4822edb76666539e47056d159218c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 2.8E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS02355 5aa4822edb76666539e47056d159218c 229 Pfam PF00072 Response regulator receiver domain 3 112 3.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS02355 5aa4822edb76666539e47056d159218c 229 SUPERFAMILY SSF52172 1 172 3.13E-38 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS02355 5aa4822edb76666539e47056d159218c 229 SMART SM00448 1 112 1.2E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS02355 5aa4822edb76666539e47056d159218c 229 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-38 T 22-04-2016 RMET_RS02355 5aa4822edb76666539e47056d159218c 229 PANTHER PTHR26402:SF279 1 221 2.3E-82 T 22-04-2016 RMET_RS02355 5aa4822edb76666539e47056d159218c 229 PANTHER PTHR26402 1 221 2.3E-82 T 22-04-2016 RMET_RS02355 5aa4822edb76666539e47056d159218c 229 SMART SM00862 145 218 5.4E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS02355 5aa4822edb76666539e47056d159218c 229 Gene3D G3DSA:1.10.10.10 126 219 5.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16350 8d7b511598e7d1d82e9177bc3b749284 372 PANTHER PTHR30349 76 364 2.0E-52 T 22-04-2016 RMET_RS16350 8d7b511598e7d1d82e9177bc3b749284 372 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 96 367 2.0E-57 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS16350 8d7b511598e7d1d82e9177bc3b749284 372 PANTHER PTHR30349:SF32 76 364 2.0E-52 T 22-04-2016 RMET_RS16350 8d7b511598e7d1d82e9177bc3b749284 372 PIRSF PIRSF017082 40 369 2.3E-63 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS16350 8d7b511598e7d1d82e9177bc3b749284 372 SUPERFAMILY SSF53850 162 331 6.62E-6 T 22-04-2016 RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 40.845 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 SUPERFAMILY SSF51161 250 432 9.26E-50 T 22-04-2016 IPR011004 Trimeric LpxA-like RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 Gene3D G3DSA:3.90.550.10 2 238 1.5E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 Gene3D G3DSA:2.160.10.10 320 448 4.1E-31 T 22-04-2016 RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 PANTHER PTHR22572:SF115 2 445 1.1E-202 T 22-04-2016 RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 SUPERFAMILY SSF53448 2 248 2.25E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 Pfam PF12804 MobA-like NTP transferase domain 4 126 2.7E-21 T 22-04-2016 IPR025877 MobA-like NTP transferase RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 2 450 8.5E-187 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 Gene3D G3DSA:2.160.10.10 239 319 1.8E-16 T 22-04-2016 RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 425 1.9E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 3.9E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 296 6.5E-4 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS00945 99c272d976424fc6d0f88050489cf22a 454 PANTHER PTHR22572 2 445 1.1E-202 T 22-04-2016 RMET_RS03385 5327d9553cfdcb71a63681f52f8825c1 180 SUPERFAMILY SSF50341 36 172 1.1E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RMET_RS03385 5327d9553cfdcb71a63681f52f8825c1 180 SMART SM00260 29 167 1.5E-4 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RMET_RS03385 5327d9553cfdcb71a63681f52f8825c1 180 Pfam PF01584 CheW-like domain 38 169 3.7E-15 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 Gene3D G3DSA:3.30.1150.10 106 219 3.0E-16 T 22-04-2016 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 PANTHER PTHR33446 21 219 1.3E-12 T 22-04-2016 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 141 218 1.1E-21 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 SUPERFAMILY SSF74653 104 219 1.28E-24 T 22-04-2016 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 143 219 9.9E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 PRINTS PR01217 Proline rich extensin signature 102 119 3.3E-12 T 22-04-2016 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 PRINTS PR01217 Proline rich extensin signature 81 97 3.3E-12 T 22-04-2016 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 PRINTS PR01217 Proline rich extensin signature 48 60 3.3E-12 T 22-04-2016 RMET_RS11430 72abf09f948df1e47fc02ee15ae168c5 219 PRINTS PR01217 Proline rich extensin signature 60 81 3.3E-12 T 22-04-2016 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 278 1.4E-66 T 22-04-2016 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 SUPERFAMILY SSF53850 48 241 5.78E-40 T 22-04-2016 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 PANTHER PTHR30043 167 320 7.9E-84 T 22-04-2016 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 PANTHER PTHR30043 18 133 7.9E-84 T 22-04-2016 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 Gene3D G3DSA:3.40.190.10 113 225 2.0E-6 T 22-04-2016 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 PANTHER PTHR30043:SF4 167 320 7.9E-84 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 PANTHER PTHR30043:SF4 18 133 7.9E-84 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 7 250 1.5E-76 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 RMET_RS03885 1e222d67fa4d1871ea6f9aafa7917e9a 326 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 291 1.9E-114 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 PANTHER PTHR10366 2 265 1.7E-99 T 22-04-2016 RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 PANTHER PTHR10366 281 329 1.7E-99 T 22-04-2016 RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 PANTHER PTHR10366:SF469 2 265 1.7E-99 T 22-04-2016 RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 PANTHER PTHR10366:SF469 281 329 1.7E-99 T 22-04-2016 RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 Gene3D G3DSA:3.40.50.720 1 171 5.6E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 1.3E-46 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 Gene3D G3DSA:3.90.25.10 172 309 1.2E-30 T 22-04-2016 RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 SUPERFAMILY SSF51735 1 329 3.62E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 328 1.0E-136 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RMET_RS03660 b92e039058d47169b9cd34c598aab7f9 331 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 329 59.551 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RMET_RS17795 2228c1da32ab08b2096760ecc7f1c79c 379 PANTHER PTHR33376:SF5 32 361 1.3E-147 T 22-04-2016 RMET_RS17795 2228c1da32ab08b2096760ecc7f1c79c 379 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 58 337 5.8E-61 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RMET_RS17795 2228c1da32ab08b2096760ecc7f1c79c 379 PANTHER PTHR33376 32 361 1.3E-147 T 22-04-2016 RMET_RS17795 2228c1da32ab08b2096760ecc7f1c79c 379 PIRSF PIRSF039026 1 375 2.5E-118 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RMET_RS14120 ba175ead486d37e9be6b3f7c92bf754e 266 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 62 259 2.4E-81 T 22-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RMET_RS14120 ba175ead486d37e9be6b3f7c92bf754e 266 PANTHER PTHR23293:SF12 33 260 1.9E-72 T 22-04-2016 RMET_RS14120 ba175ead486d37e9be6b3f7c92bf754e 266 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 60 235 4.8E-39 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RMET_RS14120 ba175ead486d37e9be6b3f7c92bf754e 266 PANTHER PTHR23293 33 260 1.9E-72 T 22-04-2016 RMET_RS14120 ba175ead486d37e9be6b3f7c92bf754e 266 PIRSF PIRSF000857 25 266 9.7E-81 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RMET_RS14120 ba175ead486d37e9be6b3f7c92bf754e 266 SUPERFAMILY SSF52402 36 223 2.7E-42 T 22-04-2016 RMET_RS14120 ba175ead486d37e9be6b3f7c92bf754e 266 Gene3D G3DSA:3.40.50.620 34 231 1.9E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 Gene3D G3DSA:1.20.120.530 73 210 2.5E-30 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 SMART SM00895 80 204 1.8E-23 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 SUPERFAMILY SSF46785 6 74 6.83E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 SUPERFAMILY SSF48008 76 209 8.11E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 PANTHER PTHR11751 7 96 1.4E-25 T 22-04-2016 RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 Gene3D G3DSA:1.10.10.10 8 71 2.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 4.2E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 SMART SM00345 12 70 2.4E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS14045 5e06a3956a42e181359a85f0f5cd9b22 233 Pfam PF07729 FCD domain 80 203 7.8E-29 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS16705 7154fc3bdb3bd0448101d3a443db35e1 519 Gene3D G3DSA:2.130.10.10 154 252 6.5E-14 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RMET_RS16705 7154fc3bdb3bd0448101d3a443db35e1 519 Pfam PF02239 Cytochrome D1 heme domain 155 505 1.4E-54 T 22-04-2016 RMET_RS16705 7154fc3bdb3bd0448101d3a443db35e1 519 SUPERFAMILY SSF51004 107 509 1.44E-70 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RMET_RS16705 7154fc3bdb3bd0448101d3a443db35e1 519 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 97 1.0E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16705 7154fc3bdb3bd0448101d3a443db35e1 519 Gene3D G3DSA:1.10.760.10 16 100 2.1E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16705 7154fc3bdb3bd0448101d3a443db35e1 519 Gene3D G3DSA:2.140.10.20 253 502 4.8E-46 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain RMET_RS16705 7154fc3bdb3bd0448101d3a443db35e1 519 SUPERFAMILY SSF46626 14 107 2.01E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 400 3.5E-19 T 22-04-2016 IPR003004 GspF/PilC family RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 PRINTS PR00812 Bacterial general secretion pathway protein F signature 402 421 3.5E-19 T 22-04-2016 IPR003004 GspF/PilC family RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 PRINTS PR00812 Bacterial general secretion pathway protein F signature 182 210 3.5E-19 T 22-04-2016 IPR003004 GspF/PilC family RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 PRINTS PR00812 Bacterial general secretion pathway protein F signature 83 95 3.5E-19 T 22-04-2016 IPR003004 GspF/PilC family RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 182 210 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 PANTHER PTHR30012:SF0 29 421 3.0E-156 T 22-04-2016 RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 Pfam PF00482 Type II secretion system (T2SS), protein F 87 210 1.5E-33 T 22-04-2016 IPR018076 Type II secretion system F domain RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 Pfam PF00482 Type II secretion system (T2SS), protein F 291 413 9.9E-29 T 22-04-2016 IPR018076 Type II secretion system F domain RMET_RS15570 34e63f1a0df0dbbfa4bc2d2585d765b7 421 PANTHER PTHR30012 29 421 3.0E-156 T 22-04-2016 RMET_RS06715 9011c9bff2830b9714ff64e244fe550a 74 PIRSF PIRSF000039 3 74 1.9E-32 T 22-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 RMET_RS06715 9011c9bff2830b9714ff64e244fe550a 74 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 11 57 6.0E-21 T 22-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 RMET_RS06715 9011c9bff2830b9714ff64e244fe550a 74 Pfam PF06099 Phenol hydroxylase subunit 10 66 1.0E-26 T 22-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 SUPERFAMILY SSF48452 6 149 3.7E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 Gene3D G3DSA:1.25.40.10 6 68 3.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 Gene3D G3DSA:1.25.40.10 518 534 3.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 Gene3D G3DSA:1.25.40.10 535 629 1.7E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 SUPERFAMILY SSF48452 517 634 2.53E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 SMART SM00028 36 69 79.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 SMART SM00028 519 552 3.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 SMART SM00028 592 625 500.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 SMART SM00028 557 590 34.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS17525 b15c1d6b012e50f0708c48b2901c363c 651 SMART SM00028 118 151 370.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Gene3D G3DSA:3.30.70.240 401 489 2.5E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.7E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 SMART SM00838 398 485 4.2E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PANTHER PTHR23115:SF175 397 595 6.7E-281 T 22-04-2016 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PANTHER PTHR23115:SF175 2 373 6.7E-281 T 22-04-2016 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Gene3D G3DSA:3.40.50.300 2 193 1.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 4.1E-298 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PANTHER PTHR23115 397 595 6.7E-281 T 22-04-2016 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PANTHER PTHR23115 2 373 6.7E-281 T 22-04-2016 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Gene3D G3DSA:2.40.30.10 194 290 1.0E-24 T 22-04-2016 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Pfam PF00679 Elongation factor G C-terminus 399 484 1.2E-24 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 SUPERFAMILY SSF52540 2 205 1.42E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 7.2E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 SUPERFAMILY SSF54980 292 370 3.2E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 304.99 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Gene3D G3DSA:3.30.70.870 291 369 7.8E-26 T 22-04-2016 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 3.5E-52 T 22-04-2016 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 SUPERFAMILY SSF54980 399 493 1.87E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 3.1E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS12145 ea66ac9faa0229234e9350290a63e1b7 597 SUPERFAMILY SSF50447 165 288 2.5E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS10595 37d4a3774e1e86a2d5168c8c48abc332 295 Pfam PF01551 Peptidase family M23 195 288 1.5E-29 T 22-04-2016 IPR016047 Peptidase M23 RMET_RS10595 37d4a3774e1e86a2d5168c8c48abc332 295 Gene3D G3DSA:3.10.350.10 59 104 1.5E-15 T 22-04-2016 IPR018392 LysM domain RMET_RS10595 37d4a3774e1e86a2d5168c8c48abc332 295 Gene3D G3DSA:2.70.70.10 161 293 2.5E-39 T 22-04-2016 RMET_RS10595 37d4a3774e1e86a2d5168c8c48abc332 295 PANTHER PTHR21666 178 295 2.2E-38 T 22-04-2016 RMET_RS10595 37d4a3774e1e86a2d5168c8c48abc332 295 Pfam PF01476 LysM domain 61 103 1.1E-9 T 22-04-2016 IPR018392 LysM domain RMET_RS10595 37d4a3774e1e86a2d5168c8c48abc332 295 SMART SM00257 60 104 1.5E-8 T 22-04-2016 IPR018392 LysM domain RMET_RS10595 37d4a3774e1e86a2d5168c8c48abc332 295 PANTHER PTHR21666:SF222 178 295 2.2E-38 T 22-04-2016 RMET_RS10595 37d4a3774e1e86a2d5168c8c48abc332 295 SUPERFAMILY SSF51261 60 292 1.62E-45 T 22-04-2016 IPR011055 Duplicated hybrid motif RMET_RS00885 1a469ba06caeeefcc505712f51e90d8c 266 Gene3D G3DSA:3.10.20.30 26 75 8.7E-8 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS00885 1a469ba06caeeefcc505712f51e90d8c 266 Pfam PF01927 Mut7-C RNAse domain 97 239 1.3E-49 T 22-04-2016 IPR002782 Mut7-C RNAse domain RMET_RS00885 1a469ba06caeeefcc505712f51e90d8c 266 Pfam PF14451 Mut7-C ubiquitin 1 80 6.0E-39 T 22-04-2016 IPR027798 Ubiquitin Mut7-C domain RMET_RS00885 1a469ba06caeeefcc505712f51e90d8c 266 SUPERFAMILY SSF54285 24 76 1.05E-6 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RMET_RS00885 1a469ba06caeeefcc505712f51e90d8c 266 PANTHER PTHR39081 82 260 2.2E-20 T 22-04-2016 RMET_RS04900 3182780f989324a5313509371700ff0e 507 PANTHER PTHR23309:SF12 6 306 3.2E-201 T 22-04-2016 RMET_RS04900 3182780f989324a5313509371700ff0e 507 PANTHER PTHR23309:SF12 393 502 3.2E-201 T 22-04-2016 RMET_RS04900 3182780f989324a5313509371700ff0e 507 Gene3D G3DSA:3.40.50.720 4 190 2.8E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04900 3182780f989324a5313509371700ff0e 507 PANTHER PTHR23309 6 306 3.2E-201 T 22-04-2016 RMET_RS04900 3182780f989324a5313509371700ff0e 507 PANTHER PTHR23309 393 502 3.2E-201 T 22-04-2016 RMET_RS04900 3182780f989324a5313509371700ff0e 507 SUPERFAMILY SSF51735 6 188 6.12E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04900 3182780f989324a5313509371700ff0e 507 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 286 1.8E-25 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS04900 3182780f989324a5313509371700ff0e 507 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 416 495 1.1E-16 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS04900 3182780f989324a5313509371700ff0e 507 Gene3D G3DSA:1.10.1040.10 191 286 1.0E-26 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS04900 3182780f989324a5313509371700ff0e 507 Gene3D G3DSA:1.10.1040.10 416 494 3.7E-18 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS04900 3182780f989324a5313509371700ff0e 507 SUPERFAMILY SSF48179 416 497 4.51E-18 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS04900 3182780f989324a5313509371700ff0e 507 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 186 4.0E-59 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS04900 3182780f989324a5313509371700ff0e 507 SUPERFAMILY SSF48179 188 295 3.83E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS06675 ca62c54a1579a47e21ef21246270ea2b 149 PANTHER PTHR34309:SF1 19 141 4.1E-33 T 22-04-2016 RMET_RS06675 ca62c54a1579a47e21ef21246270ea2b 149 PANTHER PTHR34309 19 141 4.1E-33 T 22-04-2016 RMET_RS06675 ca62c54a1579a47e21ef21246270ea2b 149 Pfam PF03928 Haem-degrading 17 141 1.8E-33 T 22-04-2016 IPR005624 Haem-degrading RMET_RS06675 ca62c54a1579a47e21ef21246270ea2b 149 SUPERFAMILY SSF143744 13 144 1.26E-40 T 22-04-2016 RMET_RS04975 ca6b887c0e73bf10e43c536877c5b63b 359 PANTHER PTHR21225 1 352 2.6E-237 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS04975 ca6b887c0e73bf10e43c536877c5b63b 359 Gene3D G3DSA:3.20.20.70 9 352 3.9E-155 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS04975 ca6b887c0e73bf10e43c536877c5b63b 359 SUPERFAMILY SSF51569 7 351 8.06E-135 T 22-04-2016 RMET_RS04975 ca6b887c0e73bf10e43c536877c5b63b 359 Pfam PF00793 DAHP synthetase I family 43 341 8.7E-102 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RMET_RS04975 ca6b887c0e73bf10e43c536877c5b63b 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 352 1.6E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS04975 ca6b887c0e73bf10e43c536877c5b63b 359 PIRSF PIRSF001361 1 355 3.7E-159 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RMET_RS04975 ca6b887c0e73bf10e43c536877c5b63b 359 PANTHER PTHR21225:SF7 1 352 2.6E-237 T 22-04-2016 RMET_RS16940 6916843448f4a9629fd5b1073007dd64 202 Pfam PF01883 Domain of unknown function DUF59 35 98 5.9E-9 T 22-04-2016 IPR002744 Domain of unknown function DUF59 RMET_RS16940 6916843448f4a9629fd5b1073007dd64 202 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 43 201 2.3E-55 T 22-04-2016 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit UniPathway: UPA00930 RMET_RS16940 6916843448f4a9629fd5b1073007dd64 202 SUPERFAMILY SSF117916 36 128 1.14E-19 T 22-04-2016 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 Gene3D G3DSA:3.40.50.1100 46 146 2.0E-37 T 22-04-2016 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 Gene3D G3DSA:3.40.50.1100 152 299 3.6E-80 T 22-04-2016 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 Gene3D G3DSA:3.40.50.1100 1 45 3.6E-80 T 22-04-2016 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 298 3.2E-133 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 287 1.7E-64 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 298 7.4E-116 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 PANTHER PTHR10314 1 298 1.2E-160 T 22-04-2016 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 PANTHER PTHR10314:SF100 1 298 1.2E-160 T 22-04-2016 RMET_RS03675 ee99a5ffc88071fca10b7e1876834699 300 SUPERFAMILY SSF53686 2 298 2.1E-89 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 SUPERFAMILY SSF55073 403 568 8.63E-45 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 565 2.8E-41 T 22-04-2016 IPR000160 GGDEF domain RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 SMART SM00267 387 569 1.1E-54 T 22-04-2016 IPR000160 GGDEF domain RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 569 1.1E-47 T 22-04-2016 IPR000160 GGDEF domain RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 Gene3D G3DSA:3.30.450.20 225 354 6.7E-7 T 22-04-2016 RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 PANTHER PTHR10799:SF750 310 508 3.9E-30 T 22-04-2016 RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 PANTHER PTHR10799:SF750 524 566 3.9E-30 T 22-04-2016 RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 Gene3D G3DSA:3.30.70.270 400 571 1.1E-51 T 22-04-2016 RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 PANTHER PTHR10799 310 508 3.9E-30 T 22-04-2016 RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 PANTHER PTHR10799 524 566 3.9E-30 T 22-04-2016 RMET_RS17815 8883361cbeede70068be4933a8d737fb 587 Pfam PF17151 Periplasmic sensor domain 40 225 9.0E-60 T 22-04-2016 IPR033416 Periplasmic sensor domain CHASE7 UniPathway: UPA00694 RMET_RS05190 79e098af54f8c829bec592d8a64513cb 348 Gene3D G3DSA:2.40.160.20 272 348 5.7E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS05190 79e098af54f8c829bec592d8a64513cb 348 Pfam PF13505 Outer membrane protein beta-barrel domain 54 184 1.1E-6 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel RMET_RS05190 79e098af54f8c829bec592d8a64513cb 348 SUPERFAMILY SSF56925 257 348 4.32E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS02315 226d9698e232c01bf2cb933e552a16c2 348 PANTHER PTHR39573 9 346 1.2E-132 T 22-04-2016 RMET_RS02315 226d9698e232c01bf2cb933e552a16c2 348 SUPERFAMILY SSF56112 14 347 4.52E-76 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS02315 226d9698e232c01bf2cb933e552a16c2 348 PANTHER PTHR39573:SF1 9 346 1.2E-132 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RMET_RS02315 226d9698e232c01bf2cb933e552a16c2 348 Gene3D G3DSA:3.90.1200.10 118 347 5.7E-53 T 22-04-2016 RMET_RS02315 226d9698e232c01bf2cb933e552a16c2 348 Pfam PF01636 Phosphotransferase enzyme family 43 278 1.8E-33 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RMET_RS02315 226d9698e232c01bf2cb933e552a16c2 348 Hamap MF_01497 Stress response kinase A [srkA]. 11 342 46.317 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 Gene3D G3DSA:3.40.50.300 14 238 2.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 Gene3D G3DSA:3.40.50.300 271 499 4.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 Pfam PF00005 ABC transporter 27 174 3.5E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 Pfam PF00005 ABC transporter 293 436 4.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 SUPERFAMILY SSF52540 15 238 1.13E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 SMART SM00382 301 492 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 SMART SM00382 36 224 0.015 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 Pfam PF12698 ABC-2 family transporter protein 576 911 2.1E-35 T 22-04-2016 RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 PANTHER PTHR24220:SF388 13 396 9.2E-231 T 22-04-2016 RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 SUPERFAMILY SSF52540 271 498 6.31E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 PANTHER PTHR24220 13 396 9.2E-231 T 22-04-2016 RMET_RS08440 02c4e06e2f8c3a3b70092ba779ff14e7 919 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS06555 a6bc394de823492a928985202ac6a1ed 321 Gene3D G3DSA:3.30.420.10 133 301 1.1E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06555 a6bc394de823492a928985202ac6a1ed 321 Pfam PF00665 Integrase core domain 135 255 1.2E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS06555 a6bc394de823492a928985202ac6a1ed 321 SUPERFAMILY SSF53098 133 306 1.9E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06555 a6bc394de823492a928985202ac6a1ed 321 SUPERFAMILY SSF46689 23 110 3.85E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS06555 a6bc394de823492a928985202ac6a1ed 321 PANTHER PTHR24559 135 298 4.4E-20 T 22-04-2016 RMET_RS13445 590cfef1d40535910150f8e384898632 227 TIGRFAM TIGR02796 tolQ: protein TolQ 11 224 1.1E-86 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 RMET_RS13445 590cfef1d40535910150f8e384898632 227 PANTHER PTHR30625 8 225 4.7E-67 T 22-04-2016 RMET_RS13445 590cfef1d40535910150f8e384898632 227 PANTHER PTHR30625:SF3 8 225 4.7E-67 T 22-04-2016 RMET_RS13445 590cfef1d40535910150f8e384898632 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 84 212 2.4E-41 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RMET_RS02630 c3d74b6221aa714aa16776d2c433badd 159 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 155 4.6E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RMET_RS02630 c3d74b6221aa714aa16776d2c433badd 159 PANTHER PTHR10815:SF5 7 156 5.3E-38 T 22-04-2016 RMET_RS02630 c3d74b6221aa714aa16776d2c433badd 159 Gene3D G3DSA:1.10.10.10 71 156 1.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02630 c3d74b6221aa714aa16776d2c433badd 159 SUPERFAMILY SSF53155 7 77 4.71E-13 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RMET_RS02630 c3d74b6221aa714aa16776d2c433badd 159 PANTHER PTHR10815 7 156 5.3E-38 T 22-04-2016 RMET_RS02630 c3d74b6221aa714aa16776d2c433badd 159 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 154 4.3E-23 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RMET_RS02630 c3d74b6221aa714aa16776d2c433badd 159 SUPERFAMILY SSF46767 71 155 2.75E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RMET_RS02630 c3d74b6221aa714aa16776d2c433badd 159 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 120 126 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 63 166 9.2E-43 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 SUPERFAMILY SSF103088 62 166 8.24E-32 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 PANTHER PTHR30128 62 166 7.1E-46 T 22-04-2016 RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 PANTHER PTHR30128:SF18 62 166 7.1E-46 T 22-04-2016 RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 Pfam PF00691 OmpA family 65 160 1.3E-18 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 ProSitePatterns PS01068 OmpA-like domain. 98 142 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 Gene3D G3DSA:3.30.1330.60 60 165 3.3E-32 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 PRINTS PR01021 OMPA domain signature 66 88 1.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 PRINTS PR01021 OMPA domain signature 96 111 1.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS13425 e7b6767503149dfef7b2b8a63f6de65d 166 PRINTS PR01021 OMPA domain signature 111 127 1.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS01455 c158c7ba7c2c65800a4d1479bb10e90e 86 PANTHER PTHR24960:SF38 1 81 1.2E-27 T 22-04-2016 RMET_RS01455 c158c7ba7c2c65800a4d1479bb10e90e 86 Pfam PF12838 4Fe-4S dicluster domain 9 57 1.3E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RMET_RS01455 c158c7ba7c2c65800a4d1479bb10e90e 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RMET_RS01455 c158c7ba7c2c65800a4d1479bb10e90e 86 PANTHER PTHR24960 1 81 1.2E-27 T 22-04-2016 RMET_RS01455 c158c7ba7c2c65800a4d1479bb10e90e 86 SUPERFAMILY SSF54862 4 76 1.97E-18 T 22-04-2016 RMET_RS01455 c158c7ba7c2c65800a4d1479bb10e90e 86 Gene3D G3DSA:3.30.70.20 4 72 7.3E-18 T 22-04-2016 RMET_RS08075 3b15e8ccb5b2ceabaf275b1c05f65f0b 305 PANTHER PTHR30579:SF3 4 294 3.2E-69 T 22-04-2016 RMET_RS08075 3b15e8ccb5b2ceabaf275b1c05f65f0b 305 Gene3D G3DSA:1.10.10.10 10 91 1.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08075 3b15e8ccb5b2ceabaf275b1c05f65f0b 305 PANTHER PTHR30579 4 294 3.2E-69 T 22-04-2016 RMET_RS08075 3b15e8ccb5b2ceabaf275b1c05f65f0b 305 SUPERFAMILY SSF53850 94 294 1.03E-35 T 22-04-2016 RMET_RS08075 3b15e8ccb5b2ceabaf275b1c05f65f0b 305 SUPERFAMILY SSF46785 9 118 1.46E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08075 3b15e8ccb5b2ceabaf275b1c05f65f0b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 5.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08075 3b15e8ccb5b2ceabaf275b1c05f65f0b 305 Gene3D G3DSA:3.40.190.10 100 197 1.6E-19 T 22-04-2016 RMET_RS08075 3b15e8ccb5b2ceabaf275b1c05f65f0b 305 Pfam PF03466 LysR substrate binding domain 94 292 1.0E-31 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS04450 703cce9ecdde5a70dfc08ba6e9148346 468 PANTHER PTHR11119 14 455 3.3E-120 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS04450 703cce9ecdde5a70dfc08ba6e9148346 468 TIGRFAM TIGR03173 pbuX: xanthine permease 25 448 1.3E-166 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 RMET_RS04450 703cce9ecdde5a70dfc08ba6e9148346 468 PANTHER PTHR11119:SF3 14 455 3.3E-120 T 22-04-2016 RMET_RS04450 703cce9ecdde5a70dfc08ba6e9148346 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RMET_RS04450 703cce9ecdde5a70dfc08ba6e9148346 468 Pfam PF00860 Permease family 22 414 4.5E-103 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS04450 703cce9ecdde5a70dfc08ba6e9148346 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 445 9.2E-124 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RMET_RS21615 4fd30e781871bd11ace7ca72c1dacba2 70 SUPERFAMILY SSF55681 1 70 4.97E-18 T 22-04-2016 RMET_RS21615 4fd30e781871bd11ace7ca72c1dacba2 70 PANTHER PTHR11778:SF0 1 70 3.3E-33 T 22-04-2016 RMET_RS21615 4fd30e781871bd11ace7ca72c1dacba2 70 Gene3D G3DSA:3.30.930.10 1 70 2.7E-26 T 22-04-2016 RMET_RS21615 4fd30e781871bd11ace7ca72c1dacba2 70 PRINTS PR00981 Seryl-tRNA synthetase signature 49 65 9.5E-13 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS21615 4fd30e781871bd11ace7ca72c1dacba2 70 PRINTS PR00981 Seryl-tRNA synthetase signature 32 45 9.5E-13 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS21615 4fd30e781871bd11ace7ca72c1dacba2 70 PRINTS PR00981 Seryl-tRNA synthetase signature 67 70 9.5E-13 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS21615 4fd30e781871bd11ace7ca72c1dacba2 70 PANTHER PTHR11778 1 70 3.3E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS07145 eefe2ae65d54aa254997375e72e4b48b 116 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 59 114 7.0E-27 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB RMET_RS07145 eefe2ae65d54aa254997375e72e4b48b 116 Pfam PF11776 Nickel/cobalt transporter regulator 62 110 2.7E-18 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 Gene3D G3DSA:1.25.40.10 61 257 9.6E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 PANTHER PTHR11102 63 257 8.1E-28 T 22-04-2016 RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 Pfam PF08238 Sel1 repeat 81 114 0.16 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 Pfam PF08238 Sel1 repeat 189 223 6.7E-7 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 Pfam PF08238 Sel1 repeat 155 187 2.3E-4 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 SUPERFAMILY SSF81901 100 257 1.24E-25 T 22-04-2016 RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 SMART SM00671 80 114 10.0 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 SMART SM00671 153 188 2.7E-4 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS02895 d6df8fbc8030985ab0a525065c572002 267 SMART SM00671 189 224 3.8E-9 T 22-04-2016 IPR006597 Sel1-like repeat RMET_RS03820 ae9ed0e140c47a0dc43a8b999d3b028a 241 SMART SM00382 41 238 1.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03820 ae9ed0e140c47a0dc43a8b999d3b028a 241 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS03820 ae9ed0e140c47a0dc43a8b999d3b028a 241 PANTHER PTHR24220 11 234 5.2E-101 T 22-04-2016 RMET_RS03820 ae9ed0e140c47a0dc43a8b999d3b028a 241 PANTHER PTHR24220:SF380 11 234 5.2E-101 T 22-04-2016 RMET_RS03820 ae9ed0e140c47a0dc43a8b999d3b028a 241 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 9 234 6.1E-96 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 RMET_RS03820 ae9ed0e140c47a0dc43a8b999d3b028a 241 Pfam PF00005 ABC transporter 32 190 6.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03820 ae9ed0e140c47a0dc43a8b999d3b028a 241 SUPERFAMILY SSF52540 9 235 6.39E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03820 ae9ed0e140c47a0dc43a8b999d3b028a 241 Gene3D G3DSA:3.40.50.300 8 233 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14270 572efc2a10dd8f1ab60cced25efadef8 194 SMART SM00479 4 183 3.9E-14 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RMET_RS14270 572efc2a10dd8f1ab60cced25efadef8 194 PANTHER PTHR23044:SF5 5 181 1.0E-37 T 22-04-2016 RMET_RS14270 572efc2a10dd8f1ab60cced25efadef8 194 Gene3D G3DSA:3.30.420.10 5 174 2.8E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS14270 572efc2a10dd8f1ab60cced25efadef8 194 Pfam PF00929 Exonuclease 6 173 8.7E-18 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RMET_RS14270 572efc2a10dd8f1ab60cced25efadef8 194 PANTHER PTHR23044 5 181 1.0E-37 T 22-04-2016 RMET_RS14270 572efc2a10dd8f1ab60cced25efadef8 194 SUPERFAMILY SSF53098 4 176 2.07E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS02125 91b84fd0c26595c1c114e89d1981e6c5 194 Pfam PF04366 Las17-binding protein actin regulator 108 190 1.3E-11 T 22-04-2016 IPR007461 Ysc84 actin-binding domain RMET_RS01530 50f7545207e5b9c3b53c945d41221baa 151 PANTHER PTHR30505:SF6 1 148 4.6E-40 T 22-04-2016 RMET_RS01530 50f7545207e5b9c3b53c945d41221baa 151 Gene3D G3DSA:3.40.930.10 1 149 1.8E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RMET_RS01530 50f7545207e5b9c3b53c945d41221baa 151 PANTHER PTHR30505 1 148 4.6E-40 T 22-04-2016 RMET_RS01530 50f7545207e5b9c3b53c945d41221baa 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 147 2.7E-41 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RMET_RS01530 50f7545207e5b9c3b53c945d41221baa 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RMET_RS01530 50f7545207e5b9c3b53c945d41221baa 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 1.9E-35 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RMET_RS01530 50f7545207e5b9c3b53c945d41221baa 151 SUPERFAMILY SSF55804 1 149 1.44E-43 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 RMET_RS04185 1af8968af64ce52b64e8490581732bfc 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 41 313 6.1E-94 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04185 1af8968af64ce52b64e8490581732bfc 318 PANTHER PTHR30349 11 315 4.7E-92 T 22-04-2016 RMET_RS04185 1af8968af64ce52b64e8490581732bfc 318 PIRSF PIRSF017082 1 318 3.6E-82 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04185 1af8968af64ce52b64e8490581732bfc 318 SUPERFAMILY SSF53850 105 280 3.26E-16 T 22-04-2016 RMET_RS04185 1af8968af64ce52b64e8490581732bfc 318 PANTHER PTHR30349:SF32 11 315 4.7E-92 T 22-04-2016 RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 Pfam PF00005 ABC transporter 26 188 2.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 304 7.7E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 3.6E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 Gene3D G3DSA:3.40.50.300 4 262 2.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 SUPERFAMILY SSF52540 34 308 1.03E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 PANTHER PTHR24220 7 323 1.3E-130 T 22-04-2016 RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 PANTHER PTHR24220:SF586 7 323 1.3E-130 T 22-04-2016 RMET_RS15795 2d2d6908e9e8dd5c7216e0c58a03c5d1 332 SMART SM00382 34 238 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07105 5ef46764cfd5c4d0d0710dd99faf266d 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 74 7.0E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RMET_RS07105 5ef46764cfd5c4d0d0710dd99faf266d 300 Gene3D G3DSA:1.10.3720.10 88 295 2.1E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS07105 5ef46764cfd5c4d0d0710dd99faf266d 300 PANTHER PTHR30465:SF57 14 299 8.8E-196 T 22-04-2016 RMET_RS07105 5ef46764cfd5c4d0d0710dd99faf266d 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 298 1.0E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS07105 5ef46764cfd5c4d0d0710dd99faf266d 300 PANTHER PTHR30465 14 299 8.8E-196 T 22-04-2016 RMET_RS07105 5ef46764cfd5c4d0d0710dd99faf266d 300 SUPERFAMILY SSF161098 92 282 7.85E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS14150 dba26f80da35b429ff8b112e7390e337 389 Gene3D G3DSA:3.40.50.2300 26 221 8.1E-42 T 22-04-2016 RMET_RS14150 dba26f80da35b429ff8b112e7390e337 389 SUPERFAMILY SSF53822 26 385 1.06E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS14150 dba26f80da35b429ff8b112e7390e337 389 PANTHER PTHR30483:SF7 23 386 9.2E-129 T 22-04-2016 RMET_RS14150 dba26f80da35b429ff8b112e7390e337 389 Pfam PF13458 Periplasmic binding protein 27 381 3.0E-51 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS14150 dba26f80da35b429ff8b112e7390e337 389 PANTHER PTHR30483 23 386 9.2E-129 T 22-04-2016 RMET_RS06230 4d6c19ea698bd15fd67d0d68861a2eaa 67 Pfam PF04325 Protein of unknown function (DUF465) 14 57 3.4E-12 T 22-04-2016 IPR007420 Protein of unknown function DUF465 RMET_RS11990 db412e09ef04aaa8b88f27cd4ae2df5b 174 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 25 169 7.3E-48 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 RMET_RS11990 db412e09ef04aaa8b88f27cd4ae2df5b 174 SUPERFAMILY SSF52833 5 165 2.73E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS11990 db412e09ef04aaa8b88f27cd4ae2df5b 174 Pfam PF08534 Redoxin 35 157 4.4E-16 T 22-04-2016 IPR013740 Redoxin GO:0016491 RMET_RS11990 db412e09ef04aaa8b88f27cd4ae2df5b 174 PANTHER PTHR10681:SF107 1 173 8.1E-46 T 22-04-2016 RMET_RS11990 db412e09ef04aaa8b88f27cd4ae2df5b 174 PANTHER PTHR10681 1 173 8.1E-46 T 22-04-2016 RMET_RS11990 db412e09ef04aaa8b88f27cd4ae2df5b 174 ProSitePatterns PS00194 Thioredoxin family active site. 64 82 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS11990 db412e09ef04aaa8b88f27cd4ae2df5b 174 Gene3D G3DSA:3.40.30.10 1 172 5.6E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS28130 5d4bc7fcdecfd7356b91d9976c338505 293 Pfam PF07690 Major Facilitator Superfamily 3 290 2.7E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS28130 5d4bc7fcdecfd7356b91d9976c338505 293 PANTHER PTHR23515 1 293 1.1E-118 T 22-04-2016 RMET_RS28130 5d4bc7fcdecfd7356b91d9976c338505 293 PANTHER PTHR23515:SF6 1 293 1.1E-118 T 22-04-2016 RMET_RS28130 5d4bc7fcdecfd7356b91d9976c338505 293 SUPERFAMILY SSF103473 4 292 1.83E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS28130 5d4bc7fcdecfd7356b91d9976c338505 293 Gene3D G3DSA:1.20.1250.20 6 106 8.3E-10 T 22-04-2016 RMET_RS28130 5d4bc7fcdecfd7356b91d9976c338505 293 Gene3D G3DSA:1.20.1250.20 174 290 9.2E-7 T 22-04-2016 RMET_RS15410 e393b3989eaac345371b146c5b1f2fe9 228 PANTHER PTHR41536:SF1 2 228 9.9E-106 T 22-04-2016 RMET_RS15410 e393b3989eaac345371b146c5b1f2fe9 228 PANTHER PTHR41536 2 228 9.9E-106 T 22-04-2016 RMET_RS15410 e393b3989eaac345371b146c5b1f2fe9 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 85 178 2.5E-14 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RMET_RS15410 e393b3989eaac345371b146c5b1f2fe9 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 44.335 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 RMET_RS15410 e393b3989eaac345371b146c5b1f2fe9 228 SUPERFAMILY SSF51197 3 180 3.37E-7 T 22-04-2016 RMET_RS15410 e393b3989eaac345371b146c5b1f2fe9 228 SMART SM00702 1 179 4.0E-21 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RMET_RS05255 bdf066ceee859fd00079e3ce5ab43c3a 629 PANTHER PTHR21000 5 625 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS05255 bdf066ceee859fd00079e3ce5ab43c3a 629 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS05255 bdf066ceee859fd00079e3ce5ab43c3a 629 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 158 168 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS05255 bdf066ceee859fd00079e3ce5ab43c3a 629 PANTHER PTHR21000:SF9 5 625 0.0 T 22-04-2016 RMET_RS05255 bdf066ceee859fd00079e3ce5ab43c3a 629 SUPERFAMILY SSF143975 8 422 5.62E-141 T 22-04-2016 RMET_RS05255 bdf066ceee859fd00079e3ce5ab43c3a 629 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 8 609 2.8E-288 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 RMET_RS05255 bdf066ceee859fd00079e3ce5ab43c3a 629 SUPERFAMILY SSF52016 423 607 1.41E-53 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS05255 bdf066ceee859fd00079e3ce5ab43c3a 629 Pfam PF00920 Dehydratase family 70 605 9.0E-157 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS06490 e18e8ef20d5eb3696cdb8751baa6d707 161 Pfam PF11939 Protein of unknown function (DUF3457) 7 152 6.1E-44 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RMET_RS06490 e18e8ef20d5eb3696cdb8751baa6d707 161 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 10 152 5.7E-39 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RMET_RS06490 e18e8ef20d5eb3696cdb8751baa6d707 161 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 10 137 5.0E-70 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RMET_RS02370 78e98efd65c7847194d3a852ee53f33f 223 Pfam PF11136 Protein of unknown function (DUF2889) 13 137 2.4E-44 T 22-04-2016 IPR021312 Protein of unknown function DUF2889 RMET_RS00060 dc5fa3daa246911151ea9846bd6b8575 310 SUPERFAMILY SSF161098 68 297 3.27E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS00060 dc5fa3daa246911151ea9846bd6b8575 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 301 2.8E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS00060 dc5fa3daa246911151ea9846bd6b8575 310 PANTHER PTHR30406:SF2 23 308 1.9E-75 T 22-04-2016 RMET_RS00060 dc5fa3daa246911151ea9846bd6b8575 310 PANTHER PTHR30406 23 308 1.9E-75 T 22-04-2016 RMET_RS00060 dc5fa3daa246911151ea9846bd6b8575 310 Gene3D G3DSA:1.10.3720.10 22 299 1.3E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08970 4db59a6216126dcb8dbeed49d1094da7 402 SUPERFAMILY SSF111369 70 317 4.97E-23 T 22-04-2016 RMET_RS08970 4db59a6216126dcb8dbeed49d1094da7 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 65 399 4.7E-53 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS08970 4db59a6216126dcb8dbeed49d1094da7 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 78 315 2.1E-22 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS08970 4db59a6216126dcb8dbeed49d1094da7 402 PANTHER PTHR30469 15 400 1.3E-60 T 22-04-2016 RMET_RS08970 4db59a6216126dcb8dbeed49d1094da7 402 Gene3D G3DSA:2.40.50.100 202 228 3.3E-8 T 22-04-2016 RMET_RS08970 4db59a6216126dcb8dbeed49d1094da7 402 Gene3D G3DSA:2.40.50.100 81 113 3.3E-8 T 22-04-2016 RMET_RS08970 4db59a6216126dcb8dbeed49d1094da7 402 PANTHER PTHR30469:SF15 15 400 1.3E-60 T 22-04-2016 RMET_RS13995 f7e4da573ea6cf244ebc6c5bf45dc626 335 PANTHER PTHR30472 1 335 4.3E-86 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RMET_RS13995 f7e4da573ea6cf244ebc6c5bf45dc626 335 Pfam PF01032 FecCD transport family 19 332 7.7E-83 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RMET_RS13995 f7e4da573ea6cf244ebc6c5bf45dc626 335 SUPERFAMILY SSF81345 4 333 1.07E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RMET_RS13995 f7e4da573ea6cf244ebc6c5bf45dc626 335 Gene3D G3DSA:1.10.3470.10 4 334 2.6E-95 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RMET_RS01500 01cdcc96408fe1e64fcfd579a534dc5c 647 SUPERFAMILY SSF52540 41 111 2.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01500 01cdcc96408fe1e64fcfd579a534dc5c 647 SUPERFAMILY SSF52540 183 324 2.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01500 01cdcc96408fe1e64fcfd579a534dc5c 647 Pfam PF00350 Dynamin family 57 274 4.1E-15 T 22-04-2016 IPR022812 Dynamin superfamily RMET_RS01500 01cdcc96408fe1e64fcfd579a534dc5c 647 Gene3D G3DSA:3.40.50.300 210 319 3.6E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01500 01cdcc96408fe1e64fcfd579a534dc5c 647 Gene3D G3DSA:3.40.50.300 56 106 3.6E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17860 d56107d3c3b1e71f3ccc6d18f34dbe14 473 ProSitePatterns PS00571 Amidases signature. 154 185 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS17860 d56107d3c3b1e71f3ccc6d18f34dbe14 473 PANTHER PTHR11895 1 466 1.5E-169 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS17860 d56107d3c3b1e71f3ccc6d18f34dbe14 473 Pfam PF01425 Amidase 26 449 1.5E-96 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS17860 d56107d3c3b1e71f3ccc6d18f34dbe14 473 PANTHER PTHR11895:SF84 1 466 1.5E-169 T 22-04-2016 RMET_RS17860 d56107d3c3b1e71f3ccc6d18f34dbe14 473 Gene3D G3DSA:3.90.1300.10 3 460 8.2E-117 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS17860 d56107d3c3b1e71f3ccc6d18f34dbe14 473 SUPERFAMILY SSF75304 3 458 1.83E-123 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS10405 2450fa33e4ff05e562f85f126489abc2 390 SUPERFAMILY SSF51004 14 388 5.89E-77 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RMET_RS10405 2450fa33e4ff05e562f85f126489abc2 390 Gene3D G3DSA:2.140.10.20 120 381 6.0E-45 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain RMET_RS10405 2450fa33e4ff05e562f85f126489abc2 390 Pfam PF02239 Cytochrome D1 heme domain 25 384 4.3E-99 T 22-04-2016 RMET_RS02020 da03756be3dd71229278f0fd2a3f4926 299 PANTHER PTHR30085 1 297 1.9E-123 T 22-04-2016 RMET_RS02020 da03756be3dd71229278f0fd2a3f4926 299 PANTHER PTHR30085:SF2 1 297 1.9E-123 T 22-04-2016 RMET_RS02020 da03756be3dd71229278f0fd2a3f4926 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 268 3.5E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS02020 da03756be3dd71229278f0fd2a3f4926 299 SUPERFAMILY SSF53850 8 271 1.74E-59 T 22-04-2016 RMET_RS02020 da03756be3dd71229278f0fd2a3f4926 299 Gene3D G3DSA:3.40.190.10 35 123 3.5E-24 T 22-04-2016 RMET_RS02020 da03756be3dd71229278f0fd2a3f4926 299 Gene3D G3DSA:3.40.190.10 231 272 3.5E-24 T 22-04-2016 RMET_RS02020 da03756be3dd71229278f0fd2a3f4926 299 Gene3D G3DSA:3.40.190.10 124 230 2.8E-33 T 22-04-2016 RMET_RS02020 da03756be3dd71229278f0fd2a3f4926 299 SMART SM00062 38 270 5.1E-49 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS11015 a91ee4766ecb1918f7d81a29279c7de4 223 PANTHER PTHR30086 9 218 4.3E-84 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS11015 a91ee4766ecb1918f7d81a29279c7de4 223 PIRSF PIRSF006324 8 222 4.5E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS11015 a91ee4766ecb1918f7d81a29279c7de4 223 PANTHER PTHR30086:SF15 9 218 4.3E-84 T 22-04-2016 RMET_RS11015 a91ee4766ecb1918f7d81a29279c7de4 223 Pfam PF01810 LysE type translocator 22 219 3.1E-47 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS00895 1a72241f1a23da68d025a20046867132 655 Pfam PF01464 Transglycosylase SLT domain 487 591 4.8E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RMET_RS00895 1a72241f1a23da68d025a20046867132 655 SUPERFAMILY SSF53955 480 643 2.32E-47 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS00895 1a72241f1a23da68d025a20046867132 655 SUPERFAMILY SSF48435 52 479 4.45E-106 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RMET_RS00895 1a72241f1a23da68d025a20046867132 655 PANTHER PTHR21666 465 644 1.0E-38 T 22-04-2016 RMET_RS00895 1a72241f1a23da68d025a20046867132 655 Gene3D G3DSA:1.10.1240.20 410 469 4.8E-6 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RMET_RS00895 1a72241f1a23da68d025a20046867132 655 Pfam PF14718 Soluble lytic murein transglycosylase L domain 410 470 1.5E-6 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RMET_RS00895 1a72241f1a23da68d025a20046867132 655 Gene3D G3DSA:1.10.530.10 477 639 1.6E-47 T 22-04-2016 RMET_RS00895 1a72241f1a23da68d025a20046867132 655 Gene3D G3DSA:1.25.20.10 247 390 2.6E-41 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RMET_RS00895 1a72241f1a23da68d025a20046867132 655 Gene3D G3DSA:1.25.20.10 52 238 8.0E-44 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RMET_RS12595 d1beddde2c3d9ea0d71f82a653f9e194 150 SUPERFAMILY SSF55298 1 150 4.08E-52 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RMET_RS12595 d1beddde2c3d9ea0d71f82a653f9e194 150 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 7 150 4.3E-24 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RMET_RS12595 d1beddde2c3d9ea0d71f82a653f9e194 150 Gene3D G3DSA:3.30.1330.40 2 150 5.0E-62 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RMET_RS12595 d1beddde2c3d9ea0d71f82a653f9e194 150 PANTHER PTHR11803:SF2 1 150 8.2E-43 T 22-04-2016 RMET_RS12595 d1beddde2c3d9ea0d71f82a653f9e194 150 PANTHER PTHR11803 1 150 8.2E-43 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RMET_RS04070 d1eaffdd489e0bba99846a57eacf8f4f 115 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 19 113 3.2E-34 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RMET_RS04070 d1eaffdd489e0bba99846a57eacf8f4f 115 SUPERFAMILY SSF54534 3 115 1.06E-43 T 22-04-2016 RMET_RS04070 d1eaffdd489e0bba99846a57eacf8f4f 115 PANTHER PTHR10516 1 115 3.0E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RMET_RS04070 d1eaffdd489e0bba99846a57eacf8f4f 115 Gene3D G3DSA:3.10.50.40 2 115 1.7E-47 T 22-04-2016 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 Pfam PF00694 Aconitase C-terminal domain 693 825 2.1E-41 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PANTHER PTHR11670 668 713 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PANTHER PTHR11670 1 391 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PANTHER PTHR11670 758 901 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PANTHER PTHR11670 417 651 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 ProSitePatterns PS00450 Aconitase family signature 1. 428 444 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 Gene3D G3DSA:3.20.19.10 637 899 1.8E-78 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 Gene3D G3DSA:3.30.499.10 22 246 1.4E-77 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 Gene3D G3DSA:3.40.1060.10 247 365 2.0E-34 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 SUPERFAMILY SSF52016 636 899 3.53E-80 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 Gene3D G3DSA:3.30.499.10 367 576 2.2E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 ProSitePatterns PS01244 Aconitase family signature 2. 494 507 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 SUPERFAMILY SSF53732 20 626 1.11E-214 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PANTHER PTHR11670:SF1 668 713 0.0 T 22-04-2016 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PANTHER PTHR11670:SF1 1 391 0.0 T 22-04-2016 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PANTHER PTHR11670:SF1 758 901 0.0 T 22-04-2016 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PANTHER PTHR11670:SF1 417 651 0.0 T 22-04-2016 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 899 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 Pfam PF00330 Aconitase family (aconitate hydratase) 70 563 1.8E-176 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 214 229 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 370 384 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 494 507 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 290 303 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 276 289 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 432 443 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 171 179 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 147 160 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS12500 ac0f0b886e1ef3d0ed74e2351e3b72a0 901 PRINTS PR00415 Aconitase family signature 200 213 4.4E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS00615 f8e274dd70d9d6c7167477730bc9d6ee 84 PANTHER PTHR35175 1 74 9.6E-19 T 22-04-2016 RMET_RS00615 f8e274dd70d9d6c7167477730bc9d6ee 84 Pfam PF06945 Protein of unknown function (DUF1289) 27 73 3.9E-21 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 Gene3D G3DSA:1.10.287.130 233 302 3.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 Pfam PF08521 Two-component sensor kinase N-terminal 18 164 1.6E-40 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 SUPERFAMILY SSF55874 296 456 1.18E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 SMART SM00387 352 458 1.6E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 Gene3D G3DSA:3.30.565.10 313 458 6.9E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 304 4.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 PANTHER PTHR24423:SF474 182 456 5.8E-69 T 22-04-2016 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 Pfam PF00672 HAMP domain 173 237 1.4E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 456 4.1E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 SMART SM00388 241 306 1.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 SUPERFAMILY SSF47384 224 305 1.63E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS08180 05ab6b672d0abf74c6e53572ea61e939 478 PANTHER PTHR24423 182 456 5.8E-69 T 22-04-2016 RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 SMART SM00062 41 264 4.2E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 262 3.2E-56 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 SUPERFAMILY SSF53850 15 264 1.55E-59 T 22-04-2016 RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 Gene3D G3DSA:3.40.190.10 120 223 1.8E-18 T 22-04-2016 RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 Gene3D G3DSA:3.40.190.10 224 264 1.1E-34 T 22-04-2016 RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 Gene3D G3DSA:3.40.190.10 38 119 1.1E-34 T 22-04-2016 RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 PANTHER PTHR18966:SF191 28 266 4.7E-48 T 22-04-2016 RMET_RS03475 3fbba50ff5394d3fe2152715a73fa05c 282 PANTHER PTHR18966 28 266 4.7E-48 T 22-04-2016 RMET_RS13140 07430172c41ed21f6eb32bd6e4928384 267 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 10 263 36.833 T 22-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RMET_RS13140 07430172c41ed21f6eb32bd6e4928384 267 PANTHER PTHR36445 5 264 4.1E-72 T 22-04-2016 RMET_RS13140 07430172c41ed21f6eb32bd6e4928384 267 Gene3D G3DSA:3.10.270.10 9 262 4.8E-105 T 22-04-2016 RMET_RS13140 07430172c41ed21f6eb32bd6e4928384 267 PANTHER PTHR36445:SF1 5 264 4.1E-72 T 22-04-2016 RMET_RS13140 07430172c41ed21f6eb32bd6e4928384 267 Pfam PF02649 Type I GTP cyclohydrolase folE2 10 258 1.2E-89 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RMET_RS02230 5684459359da26c2b783a649668b8d8a 301 SUPERFAMILY SSF103481 49 149 1.57E-14 T 22-04-2016 RMET_RS02230 5684459359da26c2b783a649668b8d8a 301 PANTHER PTHR22911:SF63 15 300 2.2E-96 T 22-04-2016 RMET_RS02230 5684459359da26c2b783a649668b8d8a 301 SUPERFAMILY SSF103481 197 300 1.7E-11 T 22-04-2016 RMET_RS02230 5684459359da26c2b783a649668b8d8a 301 PANTHER PTHR22911 15 300 2.2E-96 T 22-04-2016 RMET_RS02230 5684459359da26c2b783a649668b8d8a 301 Pfam PF00892 EamA-like transporter family 162 298 1.5E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS02230 5684459359da26c2b783a649668b8d8a 301 Pfam PF00892 EamA-like transporter family 16 146 2.7E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS00450 f602bede9a3dc52eead4b8d53237f0e0 355 SUPERFAMILY SSF82282 17 346 2.35E-101 T 22-04-2016 IPR003726 Homocysteine-binding domain RMET_RS00450 f602bede9a3dc52eead4b8d53237f0e0 355 Pfam PF02574 Homocysteine S-methyltransferase 26 333 1.0E-91 T 22-04-2016 IPR003726 Homocysteine-binding domain RMET_RS00450 f602bede9a3dc52eead4b8d53237f0e0 355 Gene3D G3DSA:3.20.20.330 15 349 1.4E-118 T 22-04-2016 IPR003726 Homocysteine-binding domain RMET_RS00450 f602bede9a3dc52eead4b8d53237f0e0 355 PANTHER PTHR21091:SF112 20 334 1.2E-155 T 22-04-2016 RMET_RS00450 f602bede9a3dc52eead4b8d53237f0e0 355 PANTHER PTHR21091 20 334 1.2E-155 T 22-04-2016 RMET_RS15590 eda687603198d85082de99e381f55ecb 63 PANTHER PTHR36150:SF1 1 63 8.7E-19 T 22-04-2016 RMET_RS15590 eda687603198d85082de99e381f55ecb 63 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 58 18.874 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RMET_RS15590 eda687603198d85082de99e381f55ecb 63 Pfam PF03884 Domain of unknown function (DUF329) 5 50 4.8E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RMET_RS15590 eda687603198d85082de99e381f55ecb 63 PANTHER PTHR36150 1 63 8.7E-19 T 22-04-2016 RMET_RS15590 eda687603198d85082de99e381f55ecb 63 Gene3D G3DSA:3.30.50.10 3 56 7.4E-25 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 RMET_RS15590 eda687603198d85082de99e381f55ecb 63 SUPERFAMILY SSF57716 2 60 1.57E-20 T 22-04-2016 RMET_RS00330 5ea81edb2b13c7c74691b0a235c9847c 339 Gene3D G3DSA:2.40.100.10 182 308 1.1E-7 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS00330 5ea81edb2b13c7c74691b0a235c9847c 339 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 318 2.7E-109 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RMET_RS00330 5ea81edb2b13c7c74691b0a235c9847c 339 PANTHER PTHR18866:SF74 158 338 1.7E-30 T 22-04-2016 RMET_RS00330 5ea81edb2b13c7c74691b0a235c9847c 339 SUPERFAMILY SSF50891 183 300 1.63E-15 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS00330 5ea81edb2b13c7c74691b0a235c9847c 339 Pfam PF02626 Allophanate hydrolase subunit 2 24 293 1.6E-93 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RMET_RS00330 5ea81edb2b13c7c74691b0a235c9847c 339 PANTHER PTHR18866 158 338 1.7E-30 T 22-04-2016 RMET_RS00330 5ea81edb2b13c7c74691b0a235c9847c 339 SMART SM00797 23 310 1.4E-143 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RMET_RS02495 781e0f7f635b73c55e1f12073689b3f1 306 Gene3D G3DSA:3.30.470.10 8 130 2.2E-43 T 22-04-2016 RMET_RS02495 781e0f7f635b73c55e1f12073689b3f1 306 PANTHER PTHR11825 10 305 1.9E-116 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS02495 781e0f7f635b73c55e1f12073689b3f1 306 Gene3D G3DSA:3.20.10.10 134 293 4.3E-58 T 22-04-2016 RMET_RS02495 781e0f7f635b73c55e1f12073689b3f1 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 1.6E-137 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 RMET_RS02495 781e0f7f635b73c55e1f12073689b3f1 306 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS02495 781e0f7f635b73c55e1f12073689b3f1 306 Pfam PF01063 Amino-transferase class IV 36 266 2.2E-59 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS02495 781e0f7f635b73c55e1f12073689b3f1 306 SUPERFAMILY SSF56752 1 303 3.4E-105 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS02495 781e0f7f635b73c55e1f12073689b3f1 306 PANTHER PTHR11825:SF7 10 305 1.9E-116 T 22-04-2016 RMET_RS16250 31ef0859218e0f776da59588cc67819e 122 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 15 108 7.2E-13 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RMET_RS16250 31ef0859218e0f776da59588cc67819e 122 PANTHER PTHR21256 2 120 6.3E-37 T 22-04-2016 RMET_RS16250 31ef0859218e0f776da59588cc67819e 122 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 8 105 21.384 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RMET_RS16250 31ef0859218e0f776da59588cc67819e 122 SUPERFAMILY SSF101386 10 109 5.23E-21 T 22-04-2016 RMET_RS16250 31ef0859218e0f776da59588cc67819e 122 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 11 105 1.2E-26 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RMET_RS16485 762acec7d06ae76f5a178d799abab2bc 393 Gene3D G3DSA:1.20.58.340 316 385 2.7E-24 T 22-04-2016 RMET_RS16485 762acec7d06ae76f5a178d799abab2bc 393 SUPERFAMILY SSF144083 326 381 6.93E-18 T 22-04-2016 RMET_RS16485 762acec7d06ae76f5a178d799abab2bc 393 SUPERFAMILY SSF143865 132 323 3.79E-16 T 22-04-2016 RMET_RS16485 762acec7d06ae76f5a178d799abab2bc 393 PANTHER PTHR21535 128 391 4.4E-27 T 22-04-2016 RMET_RS16485 762acec7d06ae76f5a178d799abab2bc 393 Pfam PF01544 CorA-like Mg2+ transporter protein 131 381 5.1E-42 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RMET_RS16485 762acec7d06ae76f5a178d799abab2bc 393 Gene3D G3DSA:3.30.460.20 66 162 6.3E-5 T 22-04-2016 RMET_RS01100 224f9b82697ec05a8879e2c261e38d5f 304 PANTHER PTHR11795:SF398 1 304 2.5E-68 T 22-04-2016 RMET_RS01100 224f9b82697ec05a8879e2c261e38d5f 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 268 6.5E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS01100 224f9b82697ec05a8879e2c261e38d5f 304 PANTHER PTHR11795 1 304 2.5E-68 T 22-04-2016 RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 PRINTS PR00332 Histidine triad family signature 29 47 3.3E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 PRINTS PR00332 Histidine triad family signature 8 24 3.3E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 PRINTS PR00332 Histidine triad family signature 96 106 3.3E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 Gene3D G3DSA:3.30.428.10 2 114 1.9E-41 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 Pfam PF01230 HIT domain 15 108 1.9E-26 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 PANTHER PTHR23089:SF2 3 113 2.6E-45 T 22-04-2016 RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 SUPERFAMILY SSF54197 1 115 1.08E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 22-04-2016 IPR019808 Histidine triad, conserved site RMET_RS16240 8f22ff215833bc92b8e8b32be7a11ad8 118 PANTHER PTHR23089 3 113 2.6E-45 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS11415 61cc277554fa7c428b316baf502da926 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 489 1.1E-47 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RMET_RS11415 61cc277554fa7c428b316baf502da926 507 PANTHER PTHR30389:SF1 1 507 2.3E-302 T 22-04-2016 RMET_RS11415 61cc277554fa7c428b316baf502da926 507 Pfam PF05683 Fumarase C-terminus 289 490 3.4E-82 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RMET_RS11415 61cc277554fa7c428b316baf502da926 507 Gene3D G3DSA:3.20.130.10 303 489 1.4E-72 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RMET_RS11415 61cc277554fa7c428b316baf502da926 507 SUPERFAMILY SSF117457 320 489 5.49E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RMET_RS11415 61cc277554fa7c428b316baf502da926 507 PIRSF PIRSF001394 1 507 6.2E-218 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS11415 61cc277554fa7c428b316baf502da926 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 1.1E-63 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RMET_RS11415 61cc277554fa7c428b316baf502da926 507 PANTHER PTHR30389 1 507 2.3E-302 T 22-04-2016 RMET_RS11415 61cc277554fa7c428b316baf502da926 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.2E-99 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RMET_RS01895 5e84b87292099b9fce281cbc58c077d6 525 PANTHER PTHR10566 3 515 4.8E-226 T 22-04-2016 RMET_RS01895 5e84b87292099b9fce281cbc58c077d6 525 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 525 51.757 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RMET_RS01895 5e84b87292099b9fce281cbc58c077d6 525 SUPERFAMILY SSF56112 192 435 5.47E-42 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS01895 5e84b87292099b9fce281cbc58c077d6 525 SUPERFAMILY SSF56112 90 157 5.47E-42 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS01895 5e84b87292099b9fce281cbc58c077d6 525 Pfam PF03109 ABC1 family 108 229 5.9E-32 T 22-04-2016 IPR004147 UbiB domain RMET_RS01895 5e84b87292099b9fce281cbc58c077d6 525 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 442 2.8E-171 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RMET_RS01895 5e84b87292099b9fce281cbc58c077d6 525 PANTHER PTHR10566:SF79 3 515 4.8E-226 T 22-04-2016 RMET_RS01895 5e84b87292099b9fce281cbc58c077d6 525 Gene3D G3DSA:3.90.1200.10 234 335 6.0E-6 T 22-04-2016 RMET_RS10550 c0eda7f572ec1a60d24240f6961d1b2c 351 Gene3D G3DSA:1.10.260.40 27 106 2.6E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS10550 c0eda7f572ec1a60d24240f6961d1b2c 351 SUPERFAMILY SSF47413 31 99 6.29E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS10550 c0eda7f572ec1a60d24240f6961d1b2c 351 PANTHER PTHR34475:SF1 20 350 7.9E-33 T 22-04-2016 RMET_RS10550 c0eda7f572ec1a60d24240f6961d1b2c 351 Pfam PF13464 Domain of unknown function (DUF4115) 275 350 2.5E-19 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 RMET_RS10550 c0eda7f572ec1a60d24240f6961d1b2c 351 Pfam PF13413 Helix-turn-helix domain 37 93 2.5E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS10550 c0eda7f572ec1a60d24240f6961d1b2c 351 PANTHER PTHR34475 20 350 7.9E-33 T 22-04-2016 RMET_RS10550 c0eda7f572ec1a60d24240f6961d1b2c 351 SMART SM00530 36 97 3.0E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS13830 fb6c96c6914685b3b9375d4178e3dc44 278 Pfam PF02634 FdhD/NarQ family 34 266 3.4E-80 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS13830 fb6c96c6914685b3b9375d4178e3dc44 278 Gene3D G3DSA:3.10.20.10 35 117 5.2E-17 T 22-04-2016 RMET_RS13830 fb6c96c6914685b3b9375d4178e3dc44 278 PANTHER PTHR30592 2 278 1.5E-116 T 22-04-2016 RMET_RS13830 fb6c96c6914685b3b9375d4178e3dc44 278 SUPERFAMILY SSF53927 16 266 1.38E-72 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RMET_RS13830 fb6c96c6914685b3b9375d4178e3dc44 278 PANTHER PTHR30592:SF2 2 278 1.5E-116 T 22-04-2016 RMET_RS13830 fb6c96c6914685b3b9375d4178e3dc44 278 Gene3D G3DSA:3.40.140.10 131 267 1.8E-54 T 22-04-2016 RMET_RS13830 fb6c96c6914685b3b9375d4178e3dc44 278 PIRSF PIRSF015626 4 270 1.7E-78 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 SUPERFAMILY SSF46626 185 297 4.04E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 SUPERFAMILY SSF46626 29 164 6.8E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 324 407 4.5E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 SUPERFAMILY SSF46626 325 429 9.03E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 Gene3D G3DSA:1.10.760.10 38 139 3.0E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 Gene3D G3DSA:1.10.760.10 185 297 3.8E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 PANTHER PTHR35008:SF3 31 428 9.8E-147 T 22-04-2016 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 PIRSF PIRSF000018 10 438 6.5E-141 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 Gene3D G3DSA:1.10.760.10 325 435 6.1E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 Pfam PF00034 Cytochrome c 189 296 4.3E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 Pfam PF00034 Cytochrome c 42 139 2.0E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08045 c748301ecd21555372c7e859d8de5dc2 438 PANTHER PTHR35008 31 428 9.8E-147 T 22-04-2016 RMET_RS06280 639ed62c2db26f2ba734e5bee5f0bd31 683 SUPERFAMILY SSF109709 119 223 2.09E-21 T 22-04-2016 RMET_RS06280 639ed62c2db26f2ba734e5bee5f0bd31 683 PANTHER PTHR33375 30 675 3.3E-78 T 22-04-2016 RMET_RS06280 639ed62c2db26f2ba734e5bee5f0bd31 683 SMART SM00470 28 125 6.7E-15 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS06280 639ed62c2db26f2ba734e5bee5f0bd31 683 Pfam PF02195 ParB-like nuclease domain 30 102 2.1E-11 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS06280 639ed62c2db26f2ba734e5bee5f0bd31 683 Gene3D G3DSA:3.90.1530.10 22 130 7.5E-17 T 22-04-2016 RMET_RS06280 639ed62c2db26f2ba734e5bee5f0bd31 683 PANTHER PTHR33375:SF2 30 675 3.3E-78 T 22-04-2016 RMET_RS06280 639ed62c2db26f2ba734e5bee5f0bd31 683 SUPERFAMILY SSF110849 27 145 6.98E-14 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS14595 19f155aac7c46a1067371a1e6389b530 235 Pfam PF00308 Bacterial dnaA protein 19 212 7.6E-10 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RMET_RS14595 19f155aac7c46a1067371a1e6389b530 235 PANTHER PTHR30050:SF5 4 229 1.2E-42 T 22-04-2016 RMET_RS14595 19f155aac7c46a1067371a1e6389b530 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 7 230 1.7E-75 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 RMET_RS14595 19f155aac7c46a1067371a1e6389b530 235 PANTHER PTHR30050 4 229 1.2E-42 T 22-04-2016 RMET_RS14595 19f155aac7c46a1067371a1e6389b530 235 Gene3D G3DSA:1.10.8.60 166 230 4.4E-26 T 22-04-2016 RMET_RS14595 19f155aac7c46a1067371a1e6389b530 235 SUPERFAMILY SSF52540 15 211 7.43E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14595 19f155aac7c46a1067371a1e6389b530 235 Gene3D G3DSA:3.40.50.300 4 162 4.3E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02035 4601d5e5d8fc7d17f8d8fdf53226a6a7 244 PANTHER PTHR24220 3 244 4.4E-179 T 22-04-2016 RMET_RS02035 4601d5e5d8fc7d17f8d8fdf53226a6a7 244 PIRSF PIRSF039085 1 243 9.8E-101 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RMET_RS02035 4601d5e5d8fc7d17f8d8fdf53226a6a7 244 SMART SM00382 26 213 4.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS02035 4601d5e5d8fc7d17f8d8fdf53226a6a7 244 PANTHER PTHR24220:SF317 3 244 4.4E-179 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 RMET_RS02035 4601d5e5d8fc7d17f8d8fdf53226a6a7 244 Pfam PF00005 ABC transporter 18 165 7.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS02035 4601d5e5d8fc7d17f8d8fdf53226a6a7 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS02035 4601d5e5d8fc7d17f8d8fdf53226a6a7 244 SUPERFAMILY SSF52540 1 226 6.02E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02035 4601d5e5d8fc7d17f8d8fdf53226a6a7 244 Gene3D G3DSA:3.40.50.300 1 226 1.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05410 848060371675034c631bdab0e6252cde 134 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 126 1.3E-49 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system RMET_RS05410 848060371675034c631bdab0e6252cde 134 PANTHER PTHR34873 1 134 1.3E-21 T 22-04-2016 RMET_RS05410 848060371675034c631bdab0e6252cde 134 PANTHER PTHR34873:SF2 1 134 1.3E-21 T 22-04-2016 RMET_RS05410 848060371675034c631bdab0e6252cde 134 SUPERFAMILY SSF143100 2 57 1.96E-15 T 22-04-2016 RMET_RS03680 e92eede9790eea4d9fa9340628ff1683 368 PANTHER PTHR30163 49 367 1.4E-102 T 22-04-2016 IPR011757 Lytic transglycosylase MltB RMET_RS03680 e92eede9790eea4d9fa9340628ff1683 368 SUPERFAMILY SSF53955 50 365 1.78E-81 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS03680 e92eede9790eea4d9fa9340628ff1683 368 Pfam PF13406 Transglycosylase SLT domain 54 360 4.4E-88 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 RMET_RS03680 e92eede9790eea4d9fa9340628ff1683 368 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 58 363 3.3E-113 T 22-04-2016 IPR011757 Lytic transglycosylase MltB RMET_RS03680 e92eede9790eea4d9fa9340628ff1683 368 PANTHER PTHR30163:SF0 49 367 1.4E-102 T 22-04-2016 RMET_RS03680 e92eede9790eea4d9fa9340628ff1683 368 Gene3D G3DSA:1.10.530.10 100 155 8.7E-51 T 22-04-2016 RMET_RS03680 e92eede9790eea4d9fa9340628ff1683 368 Gene3D G3DSA:1.10.530.10 243 366 8.7E-51 T 22-04-2016 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 PRINTS PR00762 Chloride channel signature 363 379 2.3E-6 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 PRINTS PR00762 Chloride channel signature 334 354 2.3E-6 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 PRINTS PR00762 Chloride channel signature 381 400 2.3E-6 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 PRINTS PR00762 Chloride channel signature 12 29 2.3E-6 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 PANTHER PTHR11689 552 569 1.5E-52 T 22-04-2016 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 PANTHER PTHR11689 9 485 1.5E-52 T 22-04-2016 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 PANTHER PTHR11689:SF14 552 569 1.5E-52 T 22-04-2016 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 PANTHER PTHR11689:SF14 9 485 1.5E-52 T 22-04-2016 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 Pfam PF00654 Voltage gated chloride channel 78 412 3.5E-68 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 Gene3D G3DSA:1.10.3080.10 23 432 6.3E-63 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 SUPERFAMILY SSF81340 18 435 4.84E-89 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 Pfam PF00571 CBS domain 446 492 2.0E-6 T 22-04-2016 IPR000644 CBS domain RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 Pfam PF00571 CBS domain 532 569 8.9E-5 T 22-04-2016 IPR000644 CBS domain RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 Gene3D G3DSA:3.10.580.10 445 569 1.1E-12 T 22-04-2016 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 SUPERFAMILY SSF54631 445 571 3.74E-14 T 22-04-2016 RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 SMART SM00116 453 502 19.0 T 22-04-2016 IPR000644 CBS domain RMET_RS02950 d96bfdc54346cd074f5bbceb818b169c 597 SMART SM00116 523 573 1.0 T 22-04-2016 IPR000644 CBS domain RMET_RS06560 515ccefa10ef8c58c503ec3fa78be7b2 178 PANTHER PTHR24559:SF185 27 178 3.4E-64 T 22-04-2016 RMET_RS06560 515ccefa10ef8c58c503ec3fa78be7b2 178 SUPERFAMILY SSF53098 108 178 1.9E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06560 515ccefa10ef8c58c503ec3fa78be7b2 178 Gene3D G3DSA:3.30.420.10 110 178 7.9E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06560 515ccefa10ef8c58c503ec3fa78be7b2 178 PANTHER PTHR24559 27 178 3.4E-64 T 22-04-2016 RMET_RS06560 515ccefa10ef8c58c503ec3fa78be7b2 178 Pfam PF13276 HTH-like domain 44 99 5.7E-12 T 22-04-2016 IPR025948 HTH-like domain RMET_RS17900 574136917dff1f5f18483d37ae5181e7 286 Hamap MF_00188 Protease HtpX [htpX]. 4 278 29.364 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 RMET_RS17900 574136917dff1f5f18483d37ae5181e7 286 Pfam PF01435 Peptidase family M48 66 278 1.1E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RMET_RS17900 574136917dff1f5f18483d37ae5181e7 286 PANTHER PTHR10120 1 280 5.0E-108 T 22-04-2016 RMET_RS17900 574136917dff1f5f18483d37ae5181e7 286 PANTHER PTHR10120:SF19 1 280 5.0E-108 T 22-04-2016 RMET_RS17900 574136917dff1f5f18483d37ae5181e7 286 Gene3D G3DSA:3.30.2010.10 56 147 2.5E-34 T 22-04-2016 RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 Gene3D G3DSA:3.40.190.10 211 279 3.8E-5 T 22-04-2016 RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 SUPERFAMILY SSF53850 91 310 6.83E-20 T 22-04-2016 RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 PANTHER PTHR30126 1 307 7.5E-55 T 22-04-2016 RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 Gene3D G3DSA:3.40.190.10 81 210 1.7E-11 T 22-04-2016 RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 Gene3D G3DSA:1.10.10.10 1 80 3.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 SUPERFAMILY SSF46785 1 84 6.35E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 PANTHER PTHR30126:SF2 1 307 7.5E-55 T 22-04-2016 RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS18100 ccab541ad952d9d3ad39a79e0a946f2b 312 Pfam PF03466 LysR substrate binding domain 88 310 1.4E-22 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 116 1.3E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 SMART SM01209 120 299 0.0041 T 22-04-2016 RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 Gene3D G3DSA:3.30.1490.20 135 208 2.3E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 SUPERFAMILY SSF56059 121 305 2.83E-57 T 22-04-2016 RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 Gene3D G3DSA:3.40.50.20 7 134 8.8E-54 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 SUPERFAMILY SSF52440 3 119 2.59E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 PANTHER PTHR18866 7 305 7.4E-213 T 22-04-2016 RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 305 6.3E-67 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS21160 0ea04b7f2bf7c3822c7d300a033211ad 305 Gene3D G3DSA:3.30.470.20 211 305 1.5E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS14480 24f703375bba89035e956fd18b1749a2 164 Pfam PF00692 dUTPase 21 158 1.1E-27 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RMET_RS14480 24f703375bba89035e956fd18b1749a2 164 PANTHER PTHR11241 23 159 3.4E-33 T 22-04-2016 RMET_RS14480 24f703375bba89035e956fd18b1749a2 164 Gene3D G3DSA:2.70.40.10 9 159 8.5E-45 T 22-04-2016 IPR029054 dUTPase-like RMET_RS14480 24f703375bba89035e956fd18b1749a2 164 TIGRFAM TIGR00576 dut: dUTP diphosphatase 21 158 2.0E-37 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RMET_RS14480 24f703375bba89035e956fd18b1749a2 164 SUPERFAMILY SSF51283 19 159 3.93E-41 T 22-04-2016 IPR029054 dUTPase-like RMET_RS01405 1005cdd49f427789d69cdbbb4f633923 289 PANTHER PTHR30151 12 288 6.7E-93 T 22-04-2016 RMET_RS01405 1005cdd49f427789d69cdbbb4f633923 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 283 1.8E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS01405 1005cdd49f427789d69cdbbb4f633923 289 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 81 277 7.8E-74 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 RMET_RS01405 1005cdd49f427789d69cdbbb4f633923 289 SUPERFAMILY SSF161098 91 276 5.49E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS01405 1005cdd49f427789d69cdbbb4f633923 289 Gene3D G3DSA:1.10.3720.10 89 284 5.7E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS01405 1005cdd49f427789d69cdbbb4f633923 289 PANTHER PTHR30151:SF7 12 288 6.7E-93 T 22-04-2016 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 222 7.3E-59 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 SUPERFAMILY SSF100950 1 150 4.61E-42 T 22-04-2016 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 PANTHER PTHR11934:SF11 1 224 1.9E-109 T 22-04-2016 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 SUPERFAMILY SSF75445 130 207 3.79E-23 T 22-04-2016 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 Gene3D G3DSA:3.40.50.1360 4 144 3.6E-54 T 22-04-2016 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 226 33.174 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 12 223 6.0E-67 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 PANTHER PTHR11934 1 224 1.9E-109 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS10450 25dd7db3e982413bfd1714d345dfbb49 228 Gene3D G3DSA:3.30.70.260 145 205 5.2E-28 T 22-04-2016 RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 PANTHER PTHR11999:SF5 75 202 8.2E-121 T 22-04-2016 RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 PANTHER PTHR11999:SF5 218 539 8.2E-121 T 22-04-2016 RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 79 451 1.6E-50 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 24 535 5.5E-246 T 22-04-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 Gene3D G3DSA:3.40.640.10 124 404 8.4E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 Gene3D G3DSA:3.90.1150.10 405 539 8.0E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 PANTHER PTHR11999 75 202 8.2E-121 T 22-04-2016 RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 PANTHER PTHR11999 218 539 8.2E-121 T 22-04-2016 RMET_RS02330 3995beaa51b9114ebfac194686b382ac 552 SUPERFAMILY SSF53383 38 537 4.13E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS02025 1a099354798eae62224d027b1263b535 242 Gene3D G3DSA:1.10.3720.10 21 234 1.7E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02025 1a099354798eae62224d027b1263b535 242 PANTHER PTHR30085 1 240 6.2E-124 T 22-04-2016 RMET_RS02025 1a099354798eae62224d027b1263b535 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 127 3.5E-19 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RMET_RS02025 1a099354798eae62224d027b1263b535 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 234 3.1E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02025 1a099354798eae62224d027b1263b535 242 SUPERFAMILY SSF161098 23 219 5.76E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS02025 1a099354798eae62224d027b1263b535 242 PANTHER PTHR30085:SF4 1 240 6.2E-124 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 RMET_RS17395 a6867289b9d77322ec5bf09f794c1988 556 PANTHER PTHR10742:SF224 66 555 1.1E-47 T 22-04-2016 RMET_RS17395 a6867289b9d77322ec5bf09f794c1988 556 Pfam PF13450 NAD(P)-binding Rossmann-like domain 71 138 5.4E-9 T 22-04-2016 RMET_RS17395 a6867289b9d77322ec5bf09f794c1988 556 SUPERFAMILY SSF51905 520 555 2.91E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17395 a6867289b9d77322ec5bf09f794c1988 556 SUPERFAMILY SSF51905 67 388 2.91E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17395 a6867289b9d77322ec5bf09f794c1988 556 Gene3D G3DSA:1.10.405.10 210 278 6.1E-5 T 22-04-2016 RMET_RS17395 a6867289b9d77322ec5bf09f794c1988 556 PANTHER PTHR10742 66 555 1.1E-47 T 22-04-2016 RMET_RS17395 a6867289b9d77322ec5bf09f794c1988 556 Gene3D G3DSA:3.50.50.60 67 174 6.0E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17395 a6867289b9d77322ec5bf09f794c1988 556 Gene3D G3DSA:3.50.50.60 284 382 6.0E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS10270 e589e1a6fd2e88e23e9ae537869711f9 282 PANTHER PTHR32243 1 280 6.0E-130 T 22-04-2016 RMET_RS10270 e589e1a6fd2e88e23e9ae537869711f9 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 277 1.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10270 e589e1a6fd2e88e23e9ae537869711f9 282 Gene3D G3DSA:1.10.3720.10 4 271 1.6E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10270 e589e1a6fd2e88e23e9ae537869711f9 282 SUPERFAMILY SSF161098 4 278 2.62E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10270 e589e1a6fd2e88e23e9ae537869711f9 282 PANTHER PTHR32243:SF31 1 280 6.0E-130 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 RMET_RS15150 f9dbe96b674bbe346bfbd54bbeef3c47 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 162 1.3E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RMET_RS15150 f9dbe96b674bbe346bfbd54bbeef3c47 212 Gene3D G3DSA:3.40.50.300 1 210 1.4E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15150 f9dbe96b674bbe346bfbd54bbeef3c47 212 PANTHER PTHR13696 1 209 3.7E-65 T 22-04-2016 RMET_RS15150 f9dbe96b674bbe346bfbd54bbeef3c47 212 SUPERFAMILY SSF52540 1 210 1.28E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15150 f9dbe96b674bbe346bfbd54bbeef3c47 212 PANTHER PTHR13696:SF54 1 209 3.7E-65 T 22-04-2016 RMET_RS15150 f9dbe96b674bbe346bfbd54bbeef3c47 212 PIRSF PIRSF009320 1 210 2.3E-52 T 22-04-2016 RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 Gene3D G3DSA:3.40.50.300 321 537 5.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 PANTHER PTHR19211:SF7 1 555 0.0 T 22-04-2016 RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 SUPERFAMILY SSF52540 12 236 6.41E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 Pfam PF12848 ABC transporter 230 306 3.6E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 SMART SM00382 348 526 4.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 SMART SM00382 31 236 1.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 Pfam PF00005 ABC transporter 22 191 3.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 Pfam PF00005 ABC transporter 340 473 3.3E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 Gene3D G3DSA:3.40.50.300 12 105 1.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 Gene3D G3DSA:3.40.50.300 141 288 1.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 3.9E-296 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD RMET_RS16150 2ab0dc1976e01d76aad81e6112546c7f 555 SUPERFAMILY SSF52540 301 523 2.05E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14900 65b749979d35a5e3d89d8ebfffeac187 171 PANTHER PTHR38098 8 168 7.7E-18 T 22-04-2016 RMET_RS14900 65b749979d35a5e3d89d8ebfffeac187 171 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 12 170 25.86 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RMET_RS14900 65b749979d35a5e3d89d8ebfffeac187 171 Gene3D G3DSA:3.30.160.150 27 169 2.4E-46 T 22-04-2016 RMET_RS14900 65b749979d35a5e3d89d8ebfffeac187 171 Pfam PF04390 Lipopolysaccharide-assembly 19 165 2.1E-23 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RMET_RS14900 65b749979d35a5e3d89d8ebfffeac187 171 PANTHER PTHR38098:SF1 8 168 7.7E-18 T 22-04-2016 RMET_RS18650 85c0a39e40af3e66213eda7db9774d3a 182 SUPERFAMILY SSF56645 1 181 1.96E-62 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS18650 85c0a39e40af3e66213eda7db9774d3a 182 Gene3D G3DSA:1.10.540.10 1 89 1.6E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS18650 85c0a39e40af3e66213eda7db9774d3a 182 PANTHER PTHR10909 1 182 1.1E-69 T 22-04-2016 RMET_RS18650 85c0a39e40af3e66213eda7db9774d3a 182 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 92 181 2.9E-25 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS18650 85c0a39e40af3e66213eda7db9774d3a 182 PANTHER PTHR10909:SF305 1 182 1.1E-69 T 22-04-2016 RMET_RS18650 85c0a39e40af3e66213eda7db9774d3a 182 Gene3D G3DSA:2.40.110.10 91 182 2.7E-34 T 22-04-2016 RMET_RS18650 85c0a39e40af3e66213eda7db9774d3a 182 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 1 88 1.4E-24 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS00595 398be659f8907110d7899777575dbfa7 254 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 14 187 1.7E-44 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RMET_RS00595 398be659f8907110d7899777575dbfa7 254 Pfam PF13500 AAA domain 14 221 2.3E-35 T 22-04-2016 RMET_RS00595 398be659f8907110d7899777575dbfa7 254 PIRSF PIRSF006755 11 231 2.8E-62 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RMET_RS00595 398be659f8907110d7899777575dbfa7 254 PANTHER PTHR21343 14 237 6.1E-78 T 22-04-2016 RMET_RS00595 398be659f8907110d7899777575dbfa7 254 PANTHER PTHR21343:SF13 14 237 6.1E-78 T 22-04-2016 RMET_RS00595 398be659f8907110d7899777575dbfa7 254 SUPERFAMILY SSF52540 13 225 1.22E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00595 398be659f8907110d7899777575dbfa7 254 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 10 230 28.616 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RMET_RS00595 398be659f8907110d7899777575dbfa7 254 Gene3D G3DSA:3.40.50.300 12 223 6.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16330 e12e986bf38a15102dd76b39b89028a9 266 PANTHER PTHR30035:SF3 1 231 1.3E-70 T 22-04-2016 RMET_RS16330 e12e986bf38a15102dd76b39b89028a9 266 Pfam PF04333 MlaA lipoprotein 29 221 1.8E-76 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RMET_RS16330 e12e986bf38a15102dd76b39b89028a9 266 PANTHER PTHR30035 1 231 1.3E-70 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RMET_RS16330 e12e986bf38a15102dd76b39b89028a9 266 PRINTS PR01805 VacJ lipoprotein signature 134 151 3.6E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RMET_RS16330 e12e986bf38a15102dd76b39b89028a9 266 PRINTS PR01805 VacJ lipoprotein signature 98 115 3.6E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RMET_RS16330 e12e986bf38a15102dd76b39b89028a9 266 PRINTS PR01805 VacJ lipoprotein signature 30 43 3.6E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RMET_RS16330 e12e986bf38a15102dd76b39b89028a9 266 PRINTS PR01805 VacJ lipoprotein signature 47 63 3.6E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 Gene3D G3DSA:1.10.439.10 35 202 1.1E-60 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 Gene3D G3DSA:2.30.120.10 332 407 2.9E-27 T 22-04-2016 RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 SUPERFAMILY SSF56235 45 816 7.2E-240 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 Gene3D G3DSA:3.60.20.10 417 606 1.1E-114 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 Gene3D G3DSA:3.60.20.10 203 331 1.1E-114 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 Pfam PF01804 Penicillin amidase 50 797 4.5E-235 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 PANTHER PTHR34218:SF2 1 818 1.9E-271 T 22-04-2016 RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 PIRSF PIRSF001227 11 816 5.2E-202 T 22-04-2016 IPR014395 Penicillin acylase GO:0016811 RMET_RS07940 8dcd79433d408e816c4c3b62e2a47696 821 PANTHER PTHR34218 1 818 1.9E-271 T 22-04-2016 RMET_RS06750 ca23a8313b0329c950bc51b8d64f7271 669 PANTHER PTHR37937 9 570 9.9E-104 T 22-04-2016 RMET_RS06750 ca23a8313b0329c950bc51b8d64f7271 669 Gene3D G3DSA:3.40.50.300 347 552 9.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06750 ca23a8313b0329c950bc51b8d64f7271 669 Gene3D G3DSA:3.40.50.300 104 209 9.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06750 ca23a8313b0329c950bc51b8d64f7271 669 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 112 558 3.7E-102 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 RMET_RS06750 ca23a8313b0329c950bc51b8d64f7271 669 SUPERFAMILY SSF52540 105 554 4.51E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06750 ca23a8313b0329c950bc51b8d64f7271 669 PANTHER PTHR37937:SF1 9 570 9.9E-104 T 22-04-2016 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 Gene3D G3DSA:3.40.630.10 30 234 2.0E-62 T 22-04-2016 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 Gene3D G3DSA:3.40.630.10 379 440 2.0E-62 T 22-04-2016 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 109 118 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 PANTHER PTHR11014 18 442 5.5E-115 T 22-04-2016 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 32 426 4.3E-77 T 22-04-2016 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase GO:0016813 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 SUPERFAMILY SSF53187 355 439 2.73E-57 T 22-04-2016 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 SUPERFAMILY SSF53187 18 225 2.73E-57 T 22-04-2016 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 Pfam PF07687 Peptidase dimerisation domain 223 334 2.2E-13 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 Gene3D G3DSA:3.30.70.360 235 336 3.9E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 SUPERFAMILY SSF55031 226 344 4.34E-16 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 Pfam PF01546 Peptidase family M20/M25/M40 110 434 3.3E-35 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS08100 d98c78d30913623aa0021005eaae81f9 447 PANTHER PTHR11014:SF83 18 442 5.5E-115 T 22-04-2016 RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 5.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 5.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 SUPERFAMILY SSF51735 6 262 1.53E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 Pfam PF00106 short chain dehydrogenase 9 202 3.9E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PANTHER PTHR24322 159 191 1.8E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PANTHER PTHR24322 12 143 1.8E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 0.0039 T 22-04-2016 RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 Gene3D G3DSA:3.40.50.720 3 261 1.1E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PANTHER PTHR24322:SF330 159 191 1.8E-54 T 22-04-2016 RMET_RS11050 0f54568f943a354a41ef530e1f431366 264 PANTHER PTHR24322:SF330 12 143 1.8E-54 T 22-04-2016 RMET_RS09190 d1ebcb80594de478ed1328b8e1133d55 422 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 256 411 9.4E-42 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain RMET_RS09190 d1ebcb80594de478ed1328b8e1133d55 422 PANTHER PTHR30304 18 422 1.8E-86 T 22-04-2016 RMET_RS09190 d1ebcb80594de478ed1328b8e1133d55 422 SUPERFAMILY SSF142764 6 418 1.12E-124 T 22-04-2016 RMET_RS09190 d1ebcb80594de478ed1328b8e1133d55 422 PANTHER PTHR30304:SF3 18 422 1.8E-86 T 22-04-2016 RMET_RS09190 d1ebcb80594de478ed1328b8e1133d55 422 Pfam PF07005 Putative sugar-binding N-terminal domain 6 228 4.9E-72 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 PANTHER PTHR33343 1 65 2.5E-22 T 22-04-2016 RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.545 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 4.7E-24 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 Pfam PF01632 Ribosomal protein L35 2 62 1.0E-22 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.9E-15 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.9E-15 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.9E-15 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS05850 4e3e15af5bc6929767dd56915a9dc55a 65 SUPERFAMILY SSF143034 2 64 3.79E-22 T 22-04-2016 RMET_RS17625 f8369fed33789ebb4319d70e2744cddf 339 PIRSF PIRSF017082 5 338 7.2E-84 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS17625 f8369fed33789ebb4319d70e2744cddf 339 PANTHER PTHR30349 33 336 2.2E-86 T 22-04-2016 RMET_RS17625 f8369fed33789ebb4319d70e2744cddf 339 PANTHER PTHR30349:SF32 33 336 2.2E-86 T 22-04-2016 RMET_RS17625 f8369fed33789ebb4319d70e2744cddf 339 SUPERFAMILY SSF53850 129 302 4.07E-13 T 22-04-2016 RMET_RS17625 f8369fed33789ebb4319d70e2744cddf 339 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 63 335 3.8E-86 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS10520 059d8608f6957d0504cc05dd9d6f6d6c 79 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 1.1E-28 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RMET_RS10520 059d8608f6957d0504cc05dd9d6f6d6c 79 PANTHER PTHR34772:SF1 2 79 2.0E-34 T 22-04-2016 RMET_RS10520 059d8608f6957d0504cc05dd9d6f6d6c 79 PANTHER PTHR34772 2 79 2.0E-34 T 22-04-2016 RMET_RS10520 059d8608f6957d0504cc05dd9d6f6d6c 79 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.79 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RMET_RS10520 059d8608f6957d0504cc05dd9d6f6d6c 79 SUPERFAMILY SSF50182 8 70 1.34E-23 T 22-04-2016 IPR010920 LSM domain RMET_RS10520 059d8608f6957d0504cc05dd9d6f6d6c 79 Gene3D G3DSA:2.30.30.100 2 70 9.7E-37 T 22-04-2016 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 PANTHER PTHR30404:SF0 51 194 6.1E-101 T 22-04-2016 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 PANTHER PTHR30404:SF0 254 490 6.1E-101 T 22-04-2016 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 SUPERFAMILY SSF53187 266 361 3.14E-54 T 22-04-2016 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 SUPERFAMILY SSF53187 409 485 3.14E-54 T 22-04-2016 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 267 482 1.5E-48 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 Pfam PF11741 AMIN domain 54 157 9.8E-24 T 22-04-2016 IPR021731 AMIN domain RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 SMART SM00646 327 482 2.0E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 Gene3D G3DSA:3.40.630.40 410 485 8.2E-60 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 Gene3D G3DSA:3.40.630.40 266 362 8.2E-60 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 PANTHER PTHR30404 51 194 6.1E-101 T 22-04-2016 RMET_RS02660 6d068451cff75e7fd4b5d047a5a9f149 497 PANTHER PTHR30404 254 490 6.1E-101 T 22-04-2016 RMET_RS11155 95d87559fe7c7a67535d288ca52e2ed6 395 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 131 215 2.0E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11155 95d87559fe7c7a67535d288ca52e2ed6 395 SUPERFAMILY SSF46626 87 221 1.27E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS11155 95d87559fe7c7a67535d288ca52e2ed6 395 Gene3D G3DSA:1.10.760.10 99 223 6.9E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS13755 b7d9232f165777a8dd860de591a4d329 174 PANTHER PTHR11608 36 171 5.5E-36 T 22-04-2016 RMET_RS13755 b7d9232f165777a8dd860de591a4d329 174 SUPERFAMILY SSF53271 10 146 6.56E-29 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS13755 b7d9232f165777a8dd860de591a4d329 174 Gene3D G3DSA:3.40.50.2020 9 163 4.8E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS13755 b7d9232f165777a8dd860de591a4d329 174 Pfam PF00156 Phosphoribosyl transferase domain 30 140 7.2E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RMET_RS08015 73c51e9961fb9c45fb7c60f61e463c20 180 Pfam PF03466 LysR substrate binding domain 2 141 1.5E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS08015 73c51e9961fb9c45fb7c60f61e463c20 180 Gene3D G3DSA:3.40.190.10 8 109 1.5E-19 T 22-04-2016 RMET_RS08015 73c51e9961fb9c45fb7c60f61e463c20 180 SUPERFAMILY SSF53850 2 146 9.77E-25 T 22-04-2016 RMET_RS08015 73c51e9961fb9c45fb7c60f61e463c20 180 PANTHER PTHR30537 1 158 8.0E-31 T 22-04-2016 RMET_RS08375 6da612fd1f1e3141d91d0c734b601e55 555 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 70 236 2.4E-66 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- RMET_RS08375 6da612fd1f1e3141d91d0c734b601e55 555 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 65 552 9.1E-210 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 RMET_RS08375 6da612fd1f1e3141d91d0c734b601e55 555 Gene3D G3DSA:3.40.50.1820 169 523 7.7E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08375 6da612fd1f1e3141d91d0c734b601e55 555 PANTHER PTHR36837:SF2 67 553 1.4E-197 T 22-04-2016 RMET_RS08375 6da612fd1f1e3141d91d0c734b601e55 555 PANTHER PTHR36837 67 553 1.4E-197 T 22-04-2016 RMET_RS08375 6da612fd1f1e3141d91d0c734b601e55 555 SUPERFAMILY SSF53474 204 479 3.87E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS04665 70e3ad84effc55f64512b7e24aa01fff 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.454 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 RMET_RS04665 70e3ad84effc55f64512b7e24aa01fff 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 118 3.2E-37 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RMET_RS04665 70e3ad84effc55f64512b7e24aa01fff 119 PANTHER PTHR11058 3 119 3.3E-61 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RMET_RS04665 70e3ad84effc55f64512b7e24aa01fff 119 PANTHER PTHR11058:SF10 3 119 3.3E-61 T 22-04-2016 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 PANTHER PTHR10285:SF72 1 287 3.3E-117 T 22-04-2016 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 ProSitePatterns PS00567 Phosphoribulokinase signature. 165 178 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 215 2.8E-76 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 PANTHER PTHR10285 1 287 3.3E-117 T 22-04-2016 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 PRINTS PR00478 Phosphoribulokinase family signature 165 182 4.2E-35 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.2E-35 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 PRINTS PR00478 Phosphoribulokinase family signature 183 206 4.2E-35 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 PRINTS PR00478 Phosphoribulokinase family signature 127 145 4.2E-35 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 SUPERFAMILY SSF52540 3 287 2.78E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07605 ad2d6da6ece6507425cb8d6da3952445 294 Gene3D G3DSA:3.40.50.300 1 288 1.8E-128 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 SMART SM00155 170 197 0.016 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 SMART SM00155 418 445 0.008 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 SUPERFAMILY SSF56024 26 243 1.13E-39 T 22-04-2016 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 Gene3D G3DSA:3.30.870.10 33 238 1.7E-37 T 22-04-2016 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 Gene3D G3DSA:3.30.870.10 280 481 7.0E-38 T 22-04-2016 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 SUPERFAMILY SSF56024 288 483 4.04E-35 T 22-04-2016 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 PANTHER PTHR21248 419 515 8.0E-136 T 22-04-2016 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 PANTHER PTHR21248 23 398 8.0E-136 T 22-04-2016 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 Pfam PF13091 PLD-like domain 83 198 6.0E-15 T 22-04-2016 IPR025202 Phospholipase D-like domain RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 Pfam PF13091 PLD-like domain 324 469 8.4E-21 T 22-04-2016 IPR025202 Phospholipase D-like domain RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 PANTHER PTHR21248:SF12 419 515 8.0E-136 T 22-04-2016 RMET_RS09065 b2b9fa1d120f5d8dd7bdaa4ff523caab 532 PANTHER PTHR21248:SF12 23 398 8.0E-136 T 22-04-2016 RMET_RS05775 f81b4c92c614bdc5fd8199ae0e16ed92 196 PANTHER PTHR35011 14 196 1.8E-20 T 22-04-2016 RMET_RS05775 f81b4c92c614bdc5fd8199ae0e16ed92 196 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 52 183 4.7E-26 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RMET_RS04105 ad83037e426bd69cbd3c75e62c915653 483 SUPERFAMILY SSF89796 222 481 9.16E-59 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS04105 ad83037e426bd69cbd3c75e62c915653 483 PANTHER PTHR24023:SF593 169 416 2.6E-12 T 22-04-2016 RMET_RS04105 ad83037e426bd69cbd3c75e62c915653 483 Gene3D G3DSA:3.40.50.10540 221 481 1.6E-76 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS04105 ad83037e426bd69cbd3c75e62c915653 483 Gene3D G3DSA:3.40.50.10540 41 156 1.9E-11 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS04105 ad83037e426bd69cbd3c75e62c915653 483 PANTHER PTHR24023 169 416 2.6E-12 T 22-04-2016 RMET_RS04105 ad83037e426bd69cbd3c75e62c915653 483 SUPERFAMILY SSF89796 33 212 1.7E-31 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS04105 ad83037e426bd69cbd3c75e62c915653 483 Pfam PF02515 CoA-transferase family III 224 415 2.6E-45 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 PANTHER PTHR38600:SF1 5 113 2.1E-19 T 22-04-2016 RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 Pfam PF12840 Helix-turn-helix domain 13 71 1.2E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 PANTHER PTHR38600 5 113 2.1E-19 T 22-04-2016 RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 7.1E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 7.1E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 7.1E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 Gene3D G3DSA:1.10.10.10 10 113 3.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 SUPERFAMILY SSF46785 8 106 1.56E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09010 d649a16fbd93d4c20b35d2a539fac6fb 121 SMART SM00418 13 87 5.9E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS00080 3081f2877610a22b9f2bbe01df45cbe1 107 Pfam PF12643 MazG-like family 34 106 3.2E-14 T 22-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 RMET_RS00080 3081f2877610a22b9f2bbe01df45cbe1 107 Gene3D G3DSA:1.10.287.1080 2 97 5.5E-25 T 22-04-2016 RMET_RS00080 3081f2877610a22b9f2bbe01df45cbe1 107 PIRSF PIRSF029826 2 107 2.7E-40 T 22-04-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 RMET_RS00080 3081f2877610a22b9f2bbe01df45cbe1 107 PANTHER PTHR14552 1 105 4.9E-33 T 22-04-2016 RMET_RS00080 3081f2877610a22b9f2bbe01df45cbe1 107 SUPERFAMILY SSF101386 1 107 2.45E-34 T 22-04-2016 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 1.7E-53 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 SUPERFAMILY SSF51735 201 434 3.86E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 432 2.3E-79 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 Gene3D G3DSA:3.40.50.720 201 434 2.4E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 360 371 1.3E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 1.3E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 1.3E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 1.3E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 PANTHER PTHR11606 50 433 2.3E-182 T 22-04-2016 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 PIRSF PIRSF000185 29 435 1.9E-164 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 Gene3D G3DSA:3.40.192.10 59 199 3.6E-57 T 22-04-2016 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 SUPERFAMILY SSF53223 17 203 1.76E-67 T 22-04-2016 RMET_RS02015 82d3c79404dd13b5e1c3f0ff34aa0612 435 SMART SM00839 203 432 1.8E-104 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 155 9.1E-6 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 1.2E-10 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 PANTHER PTHR10909 1 497 1.3E-206 T 22-04-2016 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 Gene3D G3DSA:1.20.140.10 299 476 4.4E-44 T 22-04-2016 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 SUPERFAMILY SSF47203 304 480 8.22E-38 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 Gene3D G3DSA:1.10.540.10 24 156 1.1E-9 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 Gene3D G3DSA:2.40.110.10 159 277 2.7E-24 T 22-04-2016 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 300 471 2.0E-17 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 276 3.9E-13 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 SUPERFAMILY SSF56645 35 277 3.27E-43 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 490 615 8.5E-33 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RMET_RS09270 6746b9d9c09f6ae20872c14d91c218aa 619 PANTHER PTHR10909:SF269 1 497 1.3E-206 T 22-04-2016 RMET_RS11905 9ccd73d008451f8dcc3171b88a79530b 292 PANTHER PTHR11935:SF110 3 292 1.1E-111 T 22-04-2016 RMET_RS11905 9ccd73d008451f8dcc3171b88a79530b 292 SUPERFAMILY SSF56281 2 257 7.6E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS11905 9ccd73d008451f8dcc3171b88a79530b 292 SMART SM00849 12 210 8.2E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS11905 9ccd73d008451f8dcc3171b88a79530b 292 Gene3D G3DSA:3.60.15.10 4 255 1.8E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS11905 9ccd73d008451f8dcc3171b88a79530b 292 PANTHER PTHR11935 3 292 1.1E-111 T 22-04-2016 RMET_RS11905 9ccd73d008451f8dcc3171b88a79530b 292 Pfam PF00753 Metallo-beta-lactamase superfamily 13 210 5.1E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS09280 f97929fe7b7e0ef1606cc1dfd9625c8b 221 Gene3D G3DSA:3.40.50.850 6 206 2.4E-68 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS09280 f97929fe7b7e0ef1606cc1dfd9625c8b 221 PANTHER PTHR11080 8 209 2.9E-69 T 22-04-2016 RMET_RS09280 f97929fe7b7e0ef1606cc1dfd9625c8b 221 SUPERFAMILY SSF52499 6 207 1.18E-51 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS09280 f97929fe7b7e0ef1606cc1dfd9625c8b 221 PANTHER PTHR11080:SF2 8 209 2.9E-69 T 22-04-2016 RMET_RS09280 f97929fe7b7e0ef1606cc1dfd9625c8b 221 Pfam PF00857 Isochorismatase family 8 204 2.2E-34 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS03795 7accad604034b7d3e677f6ee7b1b684c 260 PANTHER PTHR10859 1 127 4.7E-28 T 22-04-2016 RMET_RS03795 7accad604034b7d3e677f6ee7b1b684c 260 Pfam PF00535 Glycosyl transferase family 2 4 123 2.5E-16 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RMET_RS03795 7accad604034b7d3e677f6ee7b1b684c 260 SUPERFAMILY SSF53448 1 146 1.41E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS03795 7accad604034b7d3e677f6ee7b1b684c 260 PANTHER PTHR10859:SF99 1 127 4.7E-28 T 22-04-2016 RMET_RS03795 7accad604034b7d3e677f6ee7b1b684c 260 Gene3D G3DSA:3.90.550.10 1 109 1.5E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS06815 d706bb74fc4fc35b812b2654f72f3fb6 251 Gene3D G3DSA:1.25.40.10 20 210 9.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS06815 d706bb74fc4fc35b812b2654f72f3fb6 251 Pfam PF13525 Outer membrane lipoprotein 20 223 1.4E-64 T 22-04-2016 RMET_RS06815 d706bb74fc4fc35b812b2654f72f3fb6 251 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 231 45.107 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD RMET_RS06815 d706bb74fc4fc35b812b2654f72f3fb6 251 PANTHER PTHR37423 1 237 1.9E-77 T 22-04-2016 RMET_RS06815 d706bb74fc4fc35b812b2654f72f3fb6 251 SUPERFAMILY SSF48452 20 103 4.69E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS06815 d706bb74fc4fc35b812b2654f72f3fb6 251 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 1 235 1.9E-88 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD RMET_RS10425 31ad24e709e4a78856f346216e9925fa 393 SUPERFAMILY SSF51412 14 329 3.51E-29 T 22-04-2016 RMET_RS10425 31ad24e709e4a78856f346216e9925fa 393 PANTHER PTHR32332 15 49 9.9E-72 T 22-04-2016 RMET_RS10425 31ad24e709e4a78856f346216e9925fa 393 PANTHER PTHR32332 72 392 9.9E-72 T 22-04-2016 RMET_RS10425 31ad24e709e4a78856f346216e9925fa 393 Pfam PF03060 Nitronate monooxygenase 15 371 1.7E-31 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RMET_RS10425 31ad24e709e4a78856f346216e9925fa 393 Gene3D G3DSA:3.20.20.70 14 310 7.8E-32 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS10425 31ad24e709e4a78856f346216e9925fa 393 PANTHER PTHR32332:SF18 15 49 9.9E-72 T 22-04-2016 RMET_RS10425 31ad24e709e4a78856f346216e9925fa 393 PANTHER PTHR32332:SF18 72 392 9.9E-72 T 22-04-2016 RMET_RS17605 3acaef2f19aff4ea9aa8255f66e75003 257 SUPERFAMILY SSF52540 1 254 8.51E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17605 3acaef2f19aff4ea9aa8255f66e75003 257 PANTHER PTHR13696 1 255 1.6E-86 T 22-04-2016 RMET_RS17605 3acaef2f19aff4ea9aa8255f66e75003 257 PANTHER PTHR13696:SF52 1 255 1.6E-86 T 22-04-2016 RMET_RS17605 3acaef2f19aff4ea9aa8255f66e75003 257 Pfam PF13614 AAA domain 3 178 1.5E-63 T 22-04-2016 IPR025669 AAA domain RMET_RS17605 3acaef2f19aff4ea9aa8255f66e75003 257 Gene3D G3DSA:3.40.50.300 3 254 1.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 SUPERFAMILY SSF54373 273 363 1.57E-18 T 22-04-2016 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 PANTHER PTHR13847 107 425 6.3E-214 T 22-04-2016 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 PANTHER PTHR13847 1 63 6.3E-214 T 22-04-2016 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 SUPERFAMILY SSF51905 1 54 1.94E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 SUPERFAMILY SSF51905 107 275 1.94E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 SUPERFAMILY SSF51905 363 421 1.94E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 Gene3D G3DSA:3.30.9.10 134 193 2.9E-16 T 22-04-2016 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 Gene3D G3DSA:3.30.9.10 274 356 2.9E-16 T 22-04-2016 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 Gene3D G3DSA:3.40.50.720 1 96 9.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 Gene3D G3DSA:3.40.50.720 194 273 9.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 Gene3D G3DSA:3.40.50.720 357 421 9.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 Pfam PF01266 FAD dependent oxidoreductase 3 401 4.5E-70 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 414 49.954 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 PANTHER PTHR13847:SF148 107 425 6.3E-214 T 22-04-2016 RMET_RS03720 160752e5031ca0e3f94023fadb52ebbe 434 PANTHER PTHR13847:SF148 1 63 6.3E-214 T 22-04-2016 RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 2.7E-31 T 22-04-2016 IPR018076 Type II secretion system F domain RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 4.6E-27 T 22-04-2016 IPR018076 Type II secretion system F domain RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 7.1E-30 T 22-04-2016 IPR003004 GspF/PilC family RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 7.1E-30 T 22-04-2016 IPR003004 GspF/PilC family RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 7.1E-30 T 22-04-2016 IPR003004 GspF/PilC family RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 7.1E-30 T 22-04-2016 IPR003004 GspF/PilC family RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 PANTHER PTHR30012:SF5 2 405 2.7E-171 T 22-04-2016 RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 1.5E-172 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 RMET_RS17050 0661ff6d803e19417d2549d8f4961c0c 405 PANTHER PTHR30012 2 405 2.7E-171 T 22-04-2016 RMET_RS06000 c499b07f9cc2e8c19b897bcb9468e45d 265 PANTHER PTHR22748:SF7 1 262 1.8E-103 T 22-04-2016 RMET_RS06000 c499b07f9cc2e8c19b897bcb9468e45d 265 PANTHER PTHR22748 1 262 1.8E-103 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RMET_RS06000 c499b07f9cc2e8c19b897bcb9468e45d 265 SUPERFAMILY SSF56219 1 263 1.44E-74 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS06000 c499b07f9cc2e8c19b897bcb9468e45d 265 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 262 2.1E-77 T 22-04-2016 RMET_RS06000 c499b07f9cc2e8c19b897bcb9468e45d 265 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 219 230 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RMET_RS06000 c499b07f9cc2e8c19b897bcb9468e45d 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 255 2.7E-23 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS06000 c499b07f9cc2e8c19b897bcb9468e45d 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 262 7.2E-74 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RMET_RS06000 c499b07f9cc2e8c19b897bcb9468e45d 265 Gene3D G3DSA:3.60.10.10 1 262 1.8E-79 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS00315 f7266bb48286c2ab9f3fab042fa043f9 242 SUPERFAMILY SSF55681 2 189 9.11E-62 T 22-04-2016 RMET_RS00315 f7266bb48286c2ab9f3fab042fa043f9 242 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 184 7.4E-56 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS00315 f7266bb48286c2ab9f3fab042fa043f9 242 PANTHER PTHR10993 7 179 1.5E-63 T 22-04-2016 RMET_RS00315 f7266bb48286c2ab9f3fab042fa043f9 242 Hamap MF_00013 Octanoyltransferase [lipB]. 3 227 36.75 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS00315 f7266bb48286c2ab9f3fab042fa043f9 242 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 1.0E-23 T 22-04-2016 RMET_RS00315 f7266bb48286c2ab9f3fab042fa043f9 242 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 163 5.3E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RMET_RS00315 f7266bb48286c2ab9f3fab042fa043f9 242 Gene3D G3DSA:3.90.1550.10 3 191 1.9E-66 T 22-04-2016 RMET_RS00315 f7266bb48286c2ab9f3fab042fa043f9 242 PIRSF PIRSF016262 1 219 1.7E-56 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RMET_RS06210 619e2bdd36360822fae36a8ea648d48f 238 SUPERFAMILY SSF52540 6 235 1.07E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06210 619e2bdd36360822fae36a8ea648d48f 238 Gene3D G3DSA:3.40.50.300 5 230 3.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06210 619e2bdd36360822fae36a8ea648d48f 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS06210 619e2bdd36360822fae36a8ea648d48f 238 PANTHER PTHR24220:SF568 8 238 8.7E-93 T 22-04-2016 RMET_RS06210 619e2bdd36360822fae36a8ea648d48f 238 SMART SM00382 31 215 1.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06210 619e2bdd36360822fae36a8ea648d48f 238 Pfam PF00005 ABC transporter 22 166 1.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS06210 619e2bdd36360822fae36a8ea648d48f 238 PANTHER PTHR24220 8 238 8.7E-93 T 22-04-2016 RMET_RS10980 4877166b20a2783018ccd842e401b486 289 Pfam PF00809 Pterin binding enzyme 22 261 1.3E-81 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RMET_RS10980 4877166b20a2783018ccd842e401b486 289 SUPERFAMILY SSF51717 7 278 9.94E-98 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RMET_RS10980 4877166b20a2783018ccd842e401b486 289 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 21 36 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RMET_RS10980 4877166b20a2783018ccd842e401b486 289 Gene3D G3DSA:3.20.20.20 17 278 1.2E-107 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RMET_RS10980 4877166b20a2783018ccd842e401b486 289 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 274 1.4E-94 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 RMET_RS10980 4877166b20a2783018ccd842e401b486 289 PANTHER PTHR20941:SF1 9 281 1.1E-113 T 22-04-2016 RMET_RS10980 4877166b20a2783018ccd842e401b486 289 PANTHER PTHR20941 9 281 1.1E-113 T 22-04-2016 RMET_RS10980 4877166b20a2783018ccd842e401b486 289 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 55 68 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RMET_RS03700 3b11a5b59a00fc1323b7319270d014f4 264 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 25 264 2.3E-80 T 22-04-2016 IPR004872 Lipoprotein NlpA family RMET_RS03700 3b11a5b59a00fc1323b7319270d014f4 264 Gene3D G3DSA:3.40.190.10 26 156 8.7E-57 T 22-04-2016 RMET_RS03700 3b11a5b59a00fc1323b7319270d014f4 264 SUPERFAMILY SSF53850 28 264 4.76E-92 T 22-04-2016 RMET_RS03700 3b11a5b59a00fc1323b7319270d014f4 264 PIRSF PIRSF002854 2 264 4.0E-104 T 22-04-2016 IPR004872 Lipoprotein NlpA family RMET_RS03700 3b11a5b59a00fc1323b7319270d014f4 264 PANTHER PTHR30429 1 264 7.1E-130 T 22-04-2016 IPR004872 Lipoprotein NlpA family RMET_RS03700 3b11a5b59a00fc1323b7319270d014f4 264 Pfam PF03180 NLPA lipoprotein 29 264 1.4E-92 T 22-04-2016 IPR004872 Lipoprotein NlpA family RMET_RS12250 f0b2fa9f38e85f32aa7295c82c5199a3 203 SUPERFAMILY SSF53448 7 193 6.47E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS12250 f0b2fa9f38e85f32aa7295c82c5199a3 203 Pfam PF12804 MobA-like NTP transferase domain 9 164 2.9E-35 T 22-04-2016 IPR025877 MobA-like NTP transferase RMET_RS12250 f0b2fa9f38e85f32aa7295c82c5199a3 203 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 193 7.3E-69 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RMET_RS12250 f0b2fa9f38e85f32aa7295c82c5199a3 203 Gene3D G3DSA:3.90.550.10 5 197 3.3E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS12250 f0b2fa9f38e85f32aa7295c82c5199a3 203 PANTHER PTHR19136 1 202 1.5E-39 T 22-04-2016 RMET_RS12250 f0b2fa9f38e85f32aa7295c82c5199a3 203 PANTHER PTHR19136:SF81 1 202 1.5E-39 T 22-04-2016 RMET_RS12250 f0b2fa9f38e85f32aa7295c82c5199a3 203 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 196 27.795 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 SUPERFAMILY SSF89000 290 339 6.28E-16 T 22-04-2016 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 336 2.0E-29 T 22-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 Pfam PF07836 DmpG-like communication domain 276 337 3.5E-30 T 22-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 344 217.036 T 22-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 Gene3D G3DSA:1.10.8.60 277 341 6.6E-33 T 22-04-2016 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 SUPERFAMILY SSF51569 4 276 5.68E-66 T 22-04-2016 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 PANTHER PTHR10277:SF3 1 265 6.1E-101 T 22-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 PANTHER PTHR10277 1 265 6.1E-101 T 22-04-2016 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 Gene3D G3DSA:3.20.20.70 6 264 5.7E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 339 3.8E-170 T 22-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RMET_RS06655 398bdfa5c97bb10dc0bd5eece2e32bfa 348 Pfam PF00682 HMGL-like 8 264 3.6E-56 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RMET_RS05690 97fe9851824370ea6df681c0395adccf 447 Pfam PF03631 Virulence factor BrkB 31 278 9.9E-56 T 22-04-2016 IPR017039 Virulence factor BrkB RMET_RS05690 97fe9851824370ea6df681c0395adccf 447 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 26 278 1.1E-67 T 22-04-2016 IPR017039 Virulence factor BrkB RMET_RS05690 97fe9851824370ea6df681c0395adccf 447 PANTHER PTHR30213:SF0 10 310 1.8E-80 T 22-04-2016 RMET_RS05690 97fe9851824370ea6df681c0395adccf 447 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 9 309 22.948 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial RMET_RS05690 97fe9851824370ea6df681c0395adccf 447 PANTHER PTHR30213 10 310 1.8E-80 T 22-04-2016 RMET_RS09370 16047ea24d169c948e01663b2096010e 195 Pfam PF13463 Winged helix DNA-binding domain 77 142 3.7E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS09370 16047ea24d169c948e01663b2096010e 195 PIRSF PIRSF036158 8 195 4.5E-77 T 22-04-2016 IPR014601 Transcriptional regulator with MarR-type HTH domain RMET_RS09370 16047ea24d169c948e01663b2096010e 195 Gene3D G3DSA:1.10.10.10 52 182 2.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09370 16047ea24d169c948e01663b2096010e 195 SUPERFAMILY SSF46785 49 184 7.96E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04270 15b12916b553e18ffd3c6dfdfa56bc27 419 PANTHER PTHR13932 39 419 9.4E-177 T 22-04-2016 RMET_RS04270 15b12916b553e18ffd3c6dfdfa56bc27 419 PANTHER PTHR13932:SF7 39 419 9.4E-177 T 22-04-2016 RMET_RS04270 15b12916b553e18ffd3c6dfdfa56bc27 419 Gene3D G3DSA:3.80.30.20 41 277 1.3E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RMET_RS04270 15b12916b553e18ffd3c6dfdfa56bc27 419 SUPERFAMILY SSF102114 37 417 2.49E-109 T 22-04-2016 RMET_RS04270 15b12916b553e18ffd3c6dfdfa56bc27 419 Pfam PF04055 Radical SAM superfamily 45 216 9.3E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS04270 15b12916b553e18ffd3c6dfdfa56bc27 419 Pfam PF06969 HemN C-terminal domain 346 406 9.8E-10 T 22-04-2016 IPR010723 HemN, C-terminal RMET_RS04270 15b12916b553e18ffd3c6dfdfa56bc27 419 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 41 393 1.6E-109 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- RMET_RS04270 15b12916b553e18ffd3c6dfdfa56bc27 419 SMART SM00729 40 264 1.0E-53 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RMET_RS17520 e361d7824fe7ee3e1d218613b81ea994 406 Pfam PF00999 Sodium/hydrogen exchanger family 23 363 2.9E-25 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RMET_RS17520 e361d7824fe7ee3e1d218613b81ea994 406 PANTHER PTHR32507 1 401 2.9E-16 T 22-04-2016 RMET_RS11875 e600113efc06d25a75953889284cca91 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 36 282 2.0E-29 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS11875 e600113efc06d25a75953889284cca91 289 Gene3D G3DSA:3.90.226.10 17 281 7.2E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS11875 e600113efc06d25a75953889284cca91 289 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 125 145 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RMET_RS11875 e600113efc06d25a75953889284cca91 289 PANTHER PTHR11941 16 285 3.4E-55 T 22-04-2016 RMET_RS11875 e600113efc06d25a75953889284cca91 289 SUPERFAMILY SSF52096 17 282 4.61E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 SUPERFAMILY SSF51905 222 542 1.61E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 466 482 5.5E-22 T 22-04-2016 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 337 355 5.5E-22 T 22-04-2016 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 257 5.5E-22 T 22-04-2016 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 398 5.5E-22 T 22-04-2016 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 495 517 5.5E-22 T 22-04-2016 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PANTHER PTHR22912 222 542 1.1E-141 T 22-04-2016 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 Gene3D G3DSA:2.60.120.10 24 138 1.2E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 468 489 7.3E-36 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 346 7.3E-36 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 259 7.3E-36 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 376 400 7.3E-36 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 270 285 7.3E-36 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 505 523 7.3E-36 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 236 531 6.1E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 Gene3D G3DSA:3.50.50.60 475 548 1.4E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 Gene3D G3DSA:3.50.50.60 234 351 1.4E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 SUPERFAMILY SSF51206 13 145 7.73E-13 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 PANTHER PTHR22912:SF138 222 542 1.1E-141 T 22-04-2016 RMET_RS09630 70dc7e756b1a62af4bd0ecd508a39788 550 Gene3D G3DSA:3.50.50.60 352 474 3.5E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 PANTHER PTHR21266 17 363 4.8E-46 T 22-04-2016 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 161 364 9.2E-36 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 Gene3D G3DSA:2.102.10.10 42 141 1.0E-23 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 5.1E-6 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 5.1E-6 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 Pfam PF00355 Rieske [2Fe-2S] domain 43 121 4.1E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 Gene3D G3DSA:3.90.380.10 167 363 6.9E-12 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 SUPERFAMILY SSF55961 160 363 1.1E-44 T 22-04-2016 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 PANTHER PTHR21266:SF2 17 363 4.8E-46 T 22-04-2016 RMET_RS13160 75689449964862c8b2ad618459e1791b 367 SUPERFAMILY SSF50022 6 140 1.7E-33 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS08685 0af406dfdeced1750ca64301c1421031 189 SUPERFAMILY SSF53474 7 180 5.02E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08685 0af406dfdeced1750ca64301c1421031 189 Gene3D G3DSA:3.40.50.1820 7 187 1.2E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08685 0af406dfdeced1750ca64301c1421031 189 Pfam PF06821 Serine hydrolase 9 183 1.6E-46 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 Pfam PF02311 AraC-like ligand binding domain 23 150 2.0E-23 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 SUPERFAMILY SSF46689 220 268 3.94E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 SUPERFAMILY SSF46689 170 218 3.05E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 Gene3D G3DSA:1.10.10.60 168 221 5.1E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 SUPERFAMILY SSF51215 13 149 4.05E-24 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 Pfam PF12833 Helix-turn-helix domain 190 267 1.7E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 PANTHER PTHR11019:SF75 24 268 2.5E-45 T 22-04-2016 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 Gene3D G3DSA:2.60.120.280 20 150 3.0E-15 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 PANTHER PTHR11019 24 268 2.5E-45 T 22-04-2016 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 Gene3D G3DSA:1.10.10.60 222 266 7.7E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00050 d0fcb1ed4eca702985710a31ba0eec2d 272 SMART SM00342 184 266 1.9E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 Gene3D G3DSA:3.30.230.40 90 195 7.7E-30 T 22-04-2016 RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 PANTHER PTHR23133 1 195 3.9E-103 T 22-04-2016 RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 Gene3D G3DSA:3.30.230.40 1 88 8.3E-39 T 22-04-2016 RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 SUPERFAMILY SSF54211 88 178 4.43E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 SUPERFAMILY SSF54211 2 86 1.39E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 174 1.3E-62 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.487 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RMET_RS16280 4bd3b15417b16512da72c81cb8e69d65 195 PANTHER PTHR23133:SF2 1 195 3.9E-103 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RMET_RS01105 42196640e62f04543089f1020d614a71 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 333 4.6E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS01105 42196640e62f04543089f1020d614a71 358 PANTHER PTHR30482 1 355 6.7E-88 T 22-04-2016 RMET_RS01105 42196640e62f04543089f1020d614a71 358 PANTHER PTHR30482:SF5 1 355 6.7E-88 T 22-04-2016 RMET_RS17770 89fb20342a4cc60aabe116ef0dda0997 170 Pfam PF00856 SET domain 34 135 1.1E-17 T 22-04-2016 IPR001214 SET domain GO:0005515 RMET_RS17770 89fb20342a4cc60aabe116ef0dda0997 170 SUPERFAMILY SSF82199 24 161 2.75E-43 T 22-04-2016 RMET_RS17770 89fb20342a4cc60aabe116ef0dda0997 170 PANTHER PTHR22884 18 154 3.2E-31 T 22-04-2016 RMET_RS17770 89fb20342a4cc60aabe116ef0dda0997 170 SMART SM00317 23 141 1.2E-29 T 22-04-2016 IPR001214 SET domain GO:0005515 RMET_RS17770 89fb20342a4cc60aabe116ef0dda0997 170 Gene3D G3DSA:2.170.270.10 22 163 2.0E-43 T 22-04-2016 RMET_RS17770 89fb20342a4cc60aabe116ef0dda0997 170 PANTHER PTHR22884:SF336 18 154 3.2E-31 T 22-04-2016 RMET_RS10600 eebe59ae31203dbc4a87cd5822cba0ea 302 PANTHER PTHR11579 77 297 2.6E-56 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RMET_RS10600 eebe59ae31203dbc4a87cd5822cba0ea 302 Gene3D G3DSA:3.40.50.150 93 300 6.3E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS10600 eebe59ae31203dbc4a87cd5822cba0ea 302 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 87 299 2.5E-51 T 22-04-2016 RMET_RS10600 eebe59ae31203dbc4a87cd5822cba0ea 302 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 215 230 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RMET_RS10600 eebe59ae31203dbc4a87cd5822cba0ea 302 SUPERFAMILY SSF53335 93 290 1.52E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS10600 eebe59ae31203dbc4a87cd5822cba0ea 302 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 82 300 9.0E-54 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RMET_RS07095 62bb19ba435904027a63e03ffa115a05 518 Gene3D G3DSA:3.40.190.10 136 284 7.6E-47 T 22-04-2016 RMET_RS07095 62bb19ba435904027a63e03ffa115a05 518 Gene3D G3DSA:3.10.105.10 285 486 9.3E-56 T 22-04-2016 RMET_RS07095 62bb19ba435904027a63e03ffa115a05 518 SUPERFAMILY SSF53850 35 516 1.32E-139 T 22-04-2016 RMET_RS07095 62bb19ba435904027a63e03ffa115a05 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site RMET_RS07095 62bb19ba435904027a63e03ffa115a05 518 PANTHER PTHR30290 20 517 1.1E-242 T 22-04-2016 RMET_RS07095 62bb19ba435904027a63e03ffa115a05 518 PANTHER PTHR30290:SF32 20 517 1.1E-242 T 22-04-2016 RMET_RS07095 62bb19ba435904027a63e03ffa115a05 518 PIRSF PIRSF002741 11 518 3.3E-108 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RMET_RS07095 62bb19ba435904027a63e03ffa115a05 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 432 4.3E-93 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RMET_RS09565 4228012daf41da4bd51cb77657e0ea0f 325 Pfam PF00107 Zinc-binding dehydrogenase 156 266 4.4E-13 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS09565 4228012daf41da4bd51cb77657e0ea0f 325 Gene3D G3DSA:3.40.50.720 150 263 1.3E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09565 4228012daf41da4bd51cb77657e0ea0f 325 PANTHER PTHR11695 18 325 6.7E-69 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS09565 4228012daf41da4bd51cb77657e0ea0f 325 SUPERFAMILY SSF51735 116 292 8.74E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09565 4228012daf41da4bd51cb77657e0ea0f 325 PANTHER PTHR11695:SF558 18 325 6.7E-69 T 22-04-2016 RMET_RS09565 4228012daf41da4bd51cb77657e0ea0f 325 SMART SM00829 11 323 4.5E-11 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS09565 4228012daf41da4bd51cb77657e0ea0f 325 Gene3D G3DSA:3.90.180.10 1 149 1.0E-25 T 22-04-2016 IPR011032 GroES-like RMET_RS09565 4228012daf41da4bd51cb77657e0ea0f 325 SUPERFAMILY SSF50129 17 137 1.14E-24 T 22-04-2016 IPR011032 GroES-like RMET_RS07865 03c07d104194c76893ea01ba9cc3fae8 175 SUPERFAMILY SSF46689 57 163 6.09E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07865 03c07d104194c76893ea01ba9cc3fae8 175 PANTHER PTHR33795 1 175 5.0E-36 T 22-04-2016 RMET_RS07865 03c07d104194c76893ea01ba9cc3fae8 175 SUPERFAMILY SSF46689 2 52 4.84E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07865 03c07d104194c76893ea01ba9cc3fae8 175 Gene3D G3DSA:1.10.10.60 62 160 1.7E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07865 03c07d104194c76893ea01ba9cc3fae8 175 Gene3D G3DSA:1.10.10.60 6 55 1.0E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07865 03c07d104194c76893ea01ba9cc3fae8 175 PANTHER PTHR33795:SF1 1 175 5.0E-36 T 22-04-2016 RMET_RS07865 03c07d104194c76893ea01ba9cc3fae8 175 Pfam PF13518 Helix-turn-helix domain 63 116 1.2E-8 T 22-04-2016 RMET_RS07865 03c07d104194c76893ea01ba9cc3fae8 175 Pfam PF13518 Helix-turn-helix domain 8 56 1.2E-6 T 22-04-2016 RMET_RS05485 a1bd2b02d1c15072c365ebb729f4ed60 530 SMART SM00052 267 510 3.8E-80 T 22-04-2016 IPR001633 EAL domain RMET_RS05485 a1bd2b02d1c15072c365ebb729f4ed60 530 PANTHER PTHR33121 18 520 5.1E-93 T 22-04-2016 RMET_RS05485 a1bd2b02d1c15072c365ebb729f4ed60 530 PANTHER PTHR33121:SF16 18 520 5.1E-93 T 22-04-2016 RMET_RS05485 a1bd2b02d1c15072c365ebb729f4ed60 530 Pfam PF00563 EAL domain 276 504 1.7E-61 T 22-04-2016 IPR001633 EAL domain RMET_RS05485 a1bd2b02d1c15072c365ebb729f4ed60 530 SUPERFAMILY SSF141868 275 518 3.79E-71 T 22-04-2016 IPR001633 EAL domain RMET_RS05485 a1bd2b02d1c15072c365ebb729f4ed60 530 Gene3D G3DSA:3.20.20.450 274 517 2.4E-77 T 22-04-2016 IPR001633 EAL domain RMET_RS05485 a1bd2b02d1c15072c365ebb729f4ed60 530 Pfam PF12792 CSS motif domain associated with EAL 39 242 1.6E-40 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RMET_RS12635 19f926f7ad9960acea63d2ca2eb35177 261 Gene3D G3DSA:1.10.530.10 92 231 6.3E-46 T 22-04-2016 RMET_RS12635 19f926f7ad9960acea63d2ca2eb35177 261 SUPERFAMILY SSF53955 97 232 1.01E-43 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS12635 19f926f7ad9960acea63d2ca2eb35177 261 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 119 147 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RMET_RS12635 19f926f7ad9960acea63d2ca2eb35177 261 PANTHER PTHR21666 86 230 2.8E-38 T 22-04-2016 RMET_RS12635 19f926f7ad9960acea63d2ca2eb35177 261 Pfam PF01464 Transglycosylase SLT domain 102 209 2.2E-30 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RMET_RS01410 16decd387c610a6b7a63cec7f5e5c9e7 434 Pfam PF13379 NMT1-like family 58 308 4.4E-107 T 22-04-2016 RMET_RS01410 16decd387c610a6b7a63cec7f5e5c9e7 434 PANTHER PTHR30024:SF7 25 433 1.0E-147 T 22-04-2016 RMET_RS01410 16decd387c610a6b7a63cec7f5e5c9e7 434 SUPERFAMILY SSF53850 62 295 8.8E-30 T 22-04-2016 RMET_RS01410 16decd387c610a6b7a63cec7f5e5c9e7 434 PANTHER PTHR30024 25 433 1.0E-147 T 22-04-2016 RMET_RS01410 16decd387c610a6b7a63cec7f5e5c9e7 434 Gene3D G3DSA:3.40.190.10 187 285 3.7E-8 T 22-04-2016 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 SUPERFAMILY SSF54919 1 139 3.8E-55 T 22-04-2016 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 1.1E-53 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 Gene3D G3DSA:3.30.70.141 1 138 5.5E-57 T 22-04-2016 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.6E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.6E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.6E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.6E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.6E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 PANTHER PTHR11349 1 134 5.2E-64 T 22-04-2016 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.201 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS10565 4574bdc3278bfdde6bf1fd9e0339c334 141 SMART SM00562 3 140 5.8E-79 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 PANTHER PTHR11908 1 140 7.9E-34 T 22-04-2016 RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 SUPERFAMILY SSF54292 2 77 1.44E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 Gene3D G3DSA:3.10.20.30 2 73 5.6E-29 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 Gene3D G3DSA:1.10.150.120 74 149 2.1E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 PANTHER PTHR11908:SF82 1 140 7.9E-34 T 22-04-2016 RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 Pfam PF01799 [2Fe-2S] binding domain 72 145 1.6E-24 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 53 6.0E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS03000 0ec06aff38ae1801d863cf174323e7e9 152 SUPERFAMILY SSF47741 83 150 4.58E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RMET_RS24725 a91fa3fe650cb7277b06edf5a0803eb2 437 Gene3D G3DSA:3.40.50.1820 237 399 4.4E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS24725 a91fa3fe650cb7277b06edf5a0803eb2 437 PANTHER PTHR36837:SF2 143 412 2.7E-106 T 22-04-2016 RMET_RS24725 a91fa3fe650cb7277b06edf5a0803eb2 437 SUPERFAMILY SSF53474 277 411 1.04E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS24725 a91fa3fe650cb7277b06edf5a0803eb2 437 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 142 308 1.0E-68 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- RMET_RS24725 a91fa3fe650cb7277b06edf5a0803eb2 437 PANTHER PTHR36837 143 412 2.7E-106 T 22-04-2016 RMET_RS08835 f60018c65449fc8e2e0b64b1271d6f34 340 PIRSF PIRSF031982 6 340 1.5E-52 T 22-04-2016 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL RMET_RS08835 f60018c65449fc8e2e0b64b1271d6f34 340 Gene3D G3DSA:3.40.50.1820 28 166 3.1E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08835 f60018c65449fc8e2e0b64b1271d6f34 340 Gene3D G3DSA:3.40.50.1820 226 338 3.1E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08835 f60018c65449fc8e2e0b64b1271d6f34 340 SUPERFAMILY SSF53474 26 166 7.13E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08835 f60018c65449fc8e2e0b64b1271d6f34 340 SUPERFAMILY SSF53474 226 338 7.13E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PANTHER PTHR24322:SF317 159 191 3.5E-56 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PANTHER PTHR24322:SF317 11 143 3.5E-56 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PANTHER PTHR24322 159 191 3.5E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PANTHER PTHR24322 11 143 3.5E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 Gene3D G3DSA:3.40.50.720 6 201 2.1E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 2.6E-84 T 22-04-2016 RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PIRSF PIRSF000094 1 259 3.0E-114 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS10780 9cdd136a1d66eb589f2a0f815dabef31 260 SUPERFAMILY SSF51735 6 254 4.07E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13580 daae09a1156d9b732d879e86b5e777f3 262 Gene3D G3DSA:3.40.50.150 85 246 2.3E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS13580 daae09a1156d9b732d879e86b5e777f3 262 PANTHER PTHR23417:SF14 41 261 4.2E-74 T 22-04-2016 RMET_RS13580 daae09a1156d9b732d879e86b5e777f3 262 SUPERFAMILY SSF53335 39 261 5.22E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS13580 daae09a1156d9b732d879e86b5e777f3 262 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 47 262 29.871 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RMET_RS13580 daae09a1156d9b732d879e86b5e777f3 262 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 73 261 7.1E-55 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RMET_RS13580 daae09a1156d9b732d879e86b5e777f3 262 PANTHER PTHR23417 41 261 4.2E-74 T 22-04-2016 RMET_RS13580 daae09a1156d9b732d879e86b5e777f3 262 Pfam PF02390 Putative methyltransferase 87 256 3.4E-52 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RMET_RS04715 1ff84f18c2c8bdc7450ed2148e85f1d2 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 1.3E-22 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RMET_RS04715 1ff84f18c2c8bdc7450ed2148e85f1d2 101 PANTHER PTHR11434 3 101 4.2E-38 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RMET_RS04715 1ff84f18c2c8bdc7450ed2148e85f1d2 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.184 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RMET_RS07255 b5f8a2f4eec0b0eea94e6d7a639986e9 273 Pfam PF01148 Cytidylyltransferase family 4 270 2.1E-54 T 22-04-2016 RMET_RS07255 b5f8a2f4eec0b0eea94e6d7a639986e9 273 PANTHER PTHR13773 1 271 3.7E-57 T 22-04-2016 RMET_RS07255 b5f8a2f4eec0b0eea94e6d7a639986e9 273 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 RMET_RS07920 10306db71f5f97384f12afd06b09b9a6 306 SUPERFAMILY SSF52317 5 160 1.92E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS07920 10306db71f5f97384f12afd06b09b9a6 306 SUPERFAMILY SSF141986 141 293 3.92E-45 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RMET_RS07920 10306db71f5f97384f12afd06b09b9a6 306 Gene3D G3DSA:3.50.30.60 165 294 9.9E-47 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RMET_RS07920 10306db71f5f97384f12afd06b09b9a6 306 Pfam PF02016 LD-carboxypeptidase 7 289 5.8E-67 T 22-04-2016 IPR003507 Peptidase family S66 RMET_RS07920 10306db71f5f97384f12afd06b09b9a6 306 PIRSF PIRSF028757 1 302 2.5E-73 T 22-04-2016 IPR003507 Peptidase family S66 RMET_RS07920 10306db71f5f97384f12afd06b09b9a6 306 PANTHER PTHR30237 1 306 2.5E-84 T 22-04-2016 RMET_RS07920 10306db71f5f97384f12afd06b09b9a6 306 Gene3D G3DSA:3.40.50.10740 5 159 7.2E-36 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RMET_RS07920 10306db71f5f97384f12afd06b09b9a6 306 PANTHER PTHR30237:SF2 1 306 2.5E-84 T 22-04-2016 RMET_RS11760 1c2e1b991daaccc0c8416e448b05ff4f 191 Pfam PF13470 PIN domain 9 114 9.7E-11 T 22-04-2016 IPR002716 PIN domain RMET_RS15465 8cf670303ee9a1dcb3e7aac988b7cb4d 200 SUPERFAMILY SSF55846 15 187 6.02E-65 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RMET_RS15465 8cf670303ee9a1dcb3e7aac988b7cb4d 200 SMART SM00644 27 175 7.1E-50 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RMET_RS15465 8cf670303ee9a1dcb3e7aac988b7cb4d 200 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 38 176 4.4E-20 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RMET_RS15465 8cf670303ee9a1dcb3e7aac988b7cb4d 200 PANTHER PTHR30417:SF4 16 183 1.8E-66 T 22-04-2016 RMET_RS15465 8cf670303ee9a1dcb3e7aac988b7cb4d 200 Gene3D G3DSA:3.40.80.10 16 187 1.2E-68 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RMET_RS15465 8cf670303ee9a1dcb3e7aac988b7cb4d 200 PANTHER PTHR30417 16 183 1.8E-66 T 22-04-2016 RMET_RS11440 549bf42ebffa08ca1ac1c64a93f51775 137 PANTHER PTHR30558:SF3 10 136 1.3E-34 T 22-04-2016 RMET_RS11440 549bf42ebffa08ca1ac1c64a93f51775 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 135 4.3E-31 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RMET_RS11440 549bf42ebffa08ca1ac1c64a93f51775 137 PANTHER PTHR30558 10 136 1.3E-34 T 22-04-2016 RMET_RS12395 62207c30b70804f713ceef44361a56db 940 Gene3D G3DSA:3.10.350.10 228 284 3.6E-4 T 22-04-2016 IPR018392 LysM domain RMET_RS12395 62207c30b70804f713ceef44361a56db 940 Gene3D G3DSA:1.25.40.10 627 705 1.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS12395 62207c30b70804f713ceef44361a56db 940 Gene3D G3DSA:1.25.40.10 894 922 1.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS12395 62207c30b70804f713ceef44361a56db 940 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 234 306 1.6E-27 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal RMET_RS12395 62207c30b70804f713ceef44361a56db 940 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 896 938 1.5E-19 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal RMET_RS13695 7c51d6f9ab9fba2127b7830c306c5d55 314 Gene3D G3DSA:3.90.550.10 4 257 1.0E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS13695 7c51d6f9ab9fba2127b7830c306c5d55 314 PANTHER PTHR22916:SF9 6 143 7.7E-35 T 22-04-2016 RMET_RS13695 7c51d6f9ab9fba2127b7830c306c5d55 314 PANTHER PTHR22916:SF9 169 273 7.7E-35 T 22-04-2016 RMET_RS13695 7c51d6f9ab9fba2127b7830c306c5d55 314 Pfam PF13641 Glycosyltransferase like family 2 4 253 9.1E-16 T 22-04-2016 RMET_RS13695 7c51d6f9ab9fba2127b7830c306c5d55 314 SUPERFAMILY SSF53448 3 262 3.04E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS13695 7c51d6f9ab9fba2127b7830c306c5d55 314 PANTHER PTHR22916 6 143 7.7E-35 T 22-04-2016 RMET_RS13695 7c51d6f9ab9fba2127b7830c306c5d55 314 PANTHER PTHR22916 169 273 7.7E-35 T 22-04-2016 RMET_RS14825 5696dbc152cc03d7ef4ef9d2aa66383f 204 SUPERFAMILY SSF52833 1 100 1.14E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14825 5696dbc152cc03d7ef4ef9d2aa66383f 204 Gene3D G3DSA:1.20.1050.10 89 198 3.1E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS14825 5696dbc152cc03d7ef4ef9d2aa66383f 204 PANTHER PTHR11260:SF256 1 203 3.9E-48 T 22-04-2016 RMET_RS14825 5696dbc152cc03d7ef4ef9d2aa66383f 204 PANTHER PTHR11260 1 203 3.9E-48 T 22-04-2016 RMET_RS14825 5696dbc152cc03d7ef4ef9d2aa66383f 204 SUPERFAMILY SSF47616 73 201 3.06E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS14825 5696dbc152cc03d7ef4ef9d2aa66383f 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 7.5E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS14825 5696dbc152cc03d7ef4ef9d2aa66383f 204 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 186 7.9E-13 T 22-04-2016 RMET_RS14825 5696dbc152cc03d7ef4ef9d2aa66383f 204 Gene3D G3DSA:3.40.30.10 1 88 5.7E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 40 691 1.6E-213 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 PANTHER PTHR24031 283 297 3.2E-125 T 22-04-2016 RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 PANTHER PTHR24031 314 629 3.2E-125 T 22-04-2016 RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 PANTHER PTHR24031 652 699 3.2E-125 T 22-04-2016 RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 SUPERFAMILY SSF50249 30 185 3.14E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 Gene3D G3DSA:3.40.50.300 272 480 3.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 Gene3D G3DSA:2.40.50.140 72 153 7.9E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 PANTHER PTHR24031:SF249 283 297 3.2E-125 T 22-04-2016 RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 PANTHER PTHR24031:SF249 314 629 3.2E-125 T 22-04-2016 RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 PANTHER PTHR24031:SF249 652 699 3.2E-125 T 22-04-2016 RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 SUPERFAMILY SSF52540 231 480 6.75E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 SMART SM00487 280 486 1.7E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 SUPERFAMILY SSF52540 479 681 2.08E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 Pfam PF00271 Helicase conserved C-terminal domain 504 614 6.9E-18 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 Gene3D G3DSA:3.40.50.300 481 663 6.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 Pfam PF00270 DEAD/DEAH box helicase 288 460 1.5E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 SMART SM00490 531 615 9.2E-21 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS14750 afbb2fa1e81dee3b2d2ac2fb2a1edde7 719 Pfam PF17191 RecG wedge domain 31 178 1.6E-8 T 22-04-2016 IPR033454 RecG, wedge domain RMET_RS05070 0331892a0ade3b753a08c7ecd465bba7 312 PANTHER PTHR22911 12 299 3.0E-50 T 22-04-2016 RMET_RS05070 0331892a0ade3b753a08c7ecd465bba7 312 SUPERFAMILY SSF103481 202 298 1.57E-16 T 22-04-2016 RMET_RS05070 0331892a0ade3b753a08c7ecd465bba7 312 SUPERFAMILY SSF103481 53 152 2.75E-16 T 22-04-2016 RMET_RS05070 0331892a0ade3b753a08c7ecd465bba7 312 Pfam PF00892 EamA-like transporter family 17 150 8.9E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS05070 0331892a0ade3b753a08c7ecd465bba7 312 Pfam PF00892 EamA-like transporter family 158 296 5.4E-23 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS07355 5f7f1ac3e440524565adaad845776966 319 PANTHER PTHR12715 3 314 7.0E-76 T 22-04-2016 RMET_RS07355 5f7f1ac3e440524565adaad845776966 319 SUPERFAMILY SSF103481 235 311 6.02E-7 T 22-04-2016 RMET_RS07355 5f7f1ac3e440524565adaad845776966 319 Pfam PF00892 EamA-like transporter family 3 110 5.7E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS07355 5f7f1ac3e440524565adaad845776966 319 PANTHER PTHR12715:SF21 3 314 7.0E-76 T 22-04-2016 RMET_RS04865 54abc51454ae4d11ab67dae9f7f05deb 230 PANTHER PTHR11260 2 204 3.8E-80 T 22-04-2016 RMET_RS04865 54abc51454ae4d11ab67dae9f7f05deb 230 Gene3D G3DSA:1.20.1050.10 83 200 1.7E-54 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS04865 54abc51454ae4d11ab67dae9f7f05deb 230 SUPERFAMILY SSF47616 77 203 1.36E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS04865 54abc51454ae4d11ab67dae9f7f05deb 230 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 79 2.5E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS04865 54abc51454ae4d11ab67dae9f7f05deb 230 PANTHER PTHR11260:SF178 2 204 3.8E-80 T 22-04-2016 RMET_RS04865 54abc51454ae4d11ab67dae9f7f05deb 230 Gene3D G3DSA:3.40.30.10 1 82 2.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS04865 54abc51454ae4d11ab67dae9f7f05deb 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 196 1.4E-16 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RMET_RS04865 54abc51454ae4d11ab67dae9f7f05deb 230 SUPERFAMILY SSF52833 5 84 2.6E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS17800 1362ec0f34cc8d6959525382a4ed4aed 304 SUPERFAMILY SSF103481 37 140 3.53E-11 T 22-04-2016 RMET_RS17800 1362ec0f34cc8d6959525382a4ed4aed 304 SUPERFAMILY SSF103481 185 279 2.22E-8 T 22-04-2016 RMET_RS17800 1362ec0f34cc8d6959525382a4ed4aed 304 PANTHER PTHR22911 4 304 2.0E-115 T 22-04-2016 RMET_RS17800 1362ec0f34cc8d6959525382a4ed4aed 304 Pfam PF00892 EamA-like transporter family 3 139 1.1E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS17800 1362ec0f34cc8d6959525382a4ed4aed 304 PANTHER PTHR22911:SF41 4 304 2.0E-115 T 22-04-2016 RMET_RS17800 1362ec0f34cc8d6959525382a4ed4aed 304 TIGRFAM TIGR00688 rarD: protein RarD 4 255 1.1E-62 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 RMET_RS13635 de29bdd49f98cdd6a8b44d4465b0733e 363 Gene3D G3DSA:3.40.50.2000 214 335 1.8E-27 T 22-04-2016 RMET_RS13635 de29bdd49f98cdd6a8b44d4465b0733e 363 PANTHER PTHR30160 33 323 1.5E-53 T 22-04-2016 RMET_RS13635 de29bdd49f98cdd6a8b44d4465b0733e 363 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 107 340 2.1E-39 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RMET_RS13635 de29bdd49f98cdd6a8b44d4465b0733e 363 Gene3D G3DSA:3.40.50.2000 33 195 6.0E-37 T 22-04-2016 RMET_RS13635 de29bdd49f98cdd6a8b44d4465b0733e 363 PANTHER PTHR30160:SF8 33 323 1.5E-53 T 22-04-2016 RMET_RS13635 de29bdd49f98cdd6a8b44d4465b0733e 363 SUPERFAMILY SSF53756 33 357 2.76E-64 T 22-04-2016 RMET_RS13635 de29bdd49f98cdd6a8b44d4465b0733e 363 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 33 355 5.2E-96 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RMET_RS14865 8f5432ba9d056b6b66f16dd3ba70894d 490 PANTHER PTHR10160 1 489 1.7E-223 T 22-04-2016 RMET_RS14865 8f5432ba9d056b6b66f16dd3ba70894d 490 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 487 4.1E-188 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RMET_RS14865 8f5432ba9d056b6b66f16dd3ba70894d 490 Gene3D G3DSA:3.40.50.1220 313 489 2.4E-86 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS14865 8f5432ba9d056b6b66f16dd3ba70894d 490 SUPERFAMILY SSF52467 318 489 1.87E-75 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS14865 8f5432ba9d056b6b66f16dd3ba70894d 490 PIRSF PIRSF000204 4 490 1.5E-210 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RMET_RS14865 8f5432ba9d056b6b66f16dd3ba70894d 490 PANTHER PTHR10160:SF24 1 489 1.7E-223 T 22-04-2016 RMET_RS17015 43130d09c04deb9b8dc63833a1e6a963 230 SUPERFAMILY SSF54523 9 68 9.42E-6 T 22-04-2016 RMET_RS17015 43130d09c04deb9b8dc63833a1e6a963 230 Pfam PF13633 Prokaryotic N-terminal methylation site 7 32 2.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17015 43130d09c04deb9b8dc63833a1e6a963 230 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 6.5E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17015 43130d09c04deb9b8dc63833a1e6a963 230 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 PANTHER PTHR30346 1 296 6.9E-101 T 22-04-2016 RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 Pfam PF03466 LysR substrate binding domain 88 296 4.2E-51 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 Gene3D G3DSA:3.40.190.10 176 274 9.9E-35 T 22-04-2016 RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 Gene3D G3DSA:1.10.10.10 1 84 7.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 SUPERFAMILY SSF53850 88 299 1.58E-44 T 22-04-2016 RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 PANTHER PTHR30346:SF15 1 296 6.9E-101 T 22-04-2016 RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 SUPERFAMILY SSF46785 1 84 1.11E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 Gene3D G3DSA:3.40.190.10 90 175 4.7E-22 T 22-04-2016 RMET_RS14745 00255a7737f09679dd8930f8bc1eeb71 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS01935 e13c25696267efa852b8a96c4bdff769 169 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 137 7.6E-41 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RMET_RS01935 e13c25696267efa852b8a96c4bdff769 169 Gene3D G3DSA:3.40.50.300 2 167 1.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01935 e13c25696267efa852b8a96c4bdff769 169 PANTHER PTHR40072 2 163 3.9E-15 T 22-04-2016 RMET_RS01935 e13c25696267efa852b8a96c4bdff769 169 SUPERFAMILY SSF52540 1 167 1.36E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01935 e13c25696267efa852b8a96c4bdff769 169 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 163 3.3E-37 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RMET_RS00500 f1609f2e4b9043ea0f67cc7b7db737bb 246 Gene3D G3DSA:3.30.70.1070 164 245 9.4E-27 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS00500 f1609f2e4b9043ea0f67cc7b7db737bb 246 PANTHER PTHR34183:SF1 117 245 3.9E-12 T 22-04-2016 RMET_RS00500 f1609f2e4b9043ea0f67cc7b7db737bb 246 SUPERFAMILY SSF110997 168 244 4.18E-20 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS00500 f1609f2e4b9043ea0f67cc7b7db737bb 246 Pfam PF05036 Sporulation related domain 170 242 6.5E-19 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS00500 f1609f2e4b9043ea0f67cc7b7db737bb 246 PANTHER PTHR34183 117 245 3.9E-12 T 22-04-2016 RMET_RS07315 57eaca453af45ed805cab136a1aaa3bd 270 PANTHER PTHR31756:SF3 1 270 2.1E-94 T 22-04-2016 RMET_RS07315 57eaca453af45ed805cab136a1aaa3bd 270 PANTHER PTHR31756 1 270 2.1E-94 T 22-04-2016 RMET_RS07315 57eaca453af45ed805cab136a1aaa3bd 270 Pfam PF03618 Kinase/pyrophosphorylase 4 260 2.5E-81 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RMET_RS07315 57eaca453af45ed805cab136a1aaa3bd 270 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 269 75.022 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein RMET_RS00390 6bec50d49ccc4ad69a228fe043e19294 264 Gene3D G3DSA:3.30.70.1070 133 207 3.9E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS00390 6bec50d49ccc4ad69a228fe043e19294 264 SUPERFAMILY SSF110997 134 207 1.37E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS00390 6bec50d49ccc4ad69a228fe043e19294 264 Pfam PF05036 Sporulation related domain 137 202 2.6E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS09290 4cd46c9874ecc3b7ebb85b5b3588a0d7 493 PANTHER PTHR11785 13 488 3.7E-198 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RMET_RS09290 4cd46c9874ecc3b7ebb85b5b3588a0d7 493 PIRSF PIRSF006060 7 490 1.3E-78 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RMET_RS09290 4cd46c9874ecc3b7ebb85b5b3588a0d7 493 Pfam PF00324 Amino acid permease 25 474 1.1E-125 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RMET_RS09290 4cd46c9874ecc3b7ebb85b5b3588a0d7 493 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RMET_RS09290 4cd46c9874ecc3b7ebb85b5b3588a0d7 493 PANTHER PTHR11785:SF204 13 488 3.7E-198 T 22-04-2016 RMET_RS07030 7353d7dbde75cbd8d779a4595db2425f 253 Pfam PF00814 Glycoprotease family 39 140 9.8E-23 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS07030 7353d7dbde75cbd8d779a4595db2425f 253 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 226 2.0E-50 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 RMET_RS07030 7353d7dbde75cbd8d779a4595db2425f 253 PANTHER PTHR11735:SF11 1 141 2.6E-31 T 22-04-2016 RMET_RS07030 7353d7dbde75cbd8d779a4595db2425f 253 Gene3D G3DSA:3.30.420.40 3 141 2.3E-34 T 22-04-2016 RMET_RS07030 7353d7dbde75cbd8d779a4595db2425f 253 SUPERFAMILY SSF53067 3 109 8.63E-23 T 22-04-2016 RMET_RS07030 7353d7dbde75cbd8d779a4595db2425f 253 PANTHER PTHR11735 1 141 2.6E-31 T 22-04-2016 RMET_RS07030 7353d7dbde75cbd8d779a4595db2425f 253 SUPERFAMILY SSF53067 119 224 7.51E-22 T 22-04-2016 RMET_RS19695 3a2932a94966f79fc389ea111624c71b 300 SUPERFAMILY SSF53098 95 251 2.15E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS19695 3a2932a94966f79fc389ea111624c71b 300 Gene3D G3DSA:3.30.420.10 94 258 1.7E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS19695 3a2932a94966f79fc389ea111624c71b 300 Pfam PF00665 Integrase core domain 100 218 5.0E-20 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS15980 9f2f00123c773dddb0cf8b8d0d8c2a64 790 PANTHER PTHR30509 748 775 2.5E-24 T 22-04-2016 RMET_RS15980 9f2f00123c773dddb0cf8b8d0d8c2a64 790 PANTHER PTHR30509 1 620 2.5E-24 T 22-04-2016 RMET_RS15980 9f2f00123c773dddb0cf8b8d0d8c2a64 790 Pfam PF12805 FUSC-like inner membrane protein yccS 68 335 2.3E-62 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal RMET_RS15980 9f2f00123c773dddb0cf8b8d0d8c2a64 790 Pfam PF13515 Fusaric acid resistance protein-like 402 523 5.6E-16 T 22-04-2016 RMET_RS04915 970590e4e7a7915329c2ff91e55b2b6f 179 Pfam PF13470 PIN domain 28 143 2.6E-27 T 22-04-2016 IPR002716 PIN domain RMET_RS04915 970590e4e7a7915329c2ff91e55b2b6f 179 PANTHER PTHR34610 24 150 3.5E-18 T 22-04-2016 RMET_RS04915 970590e4e7a7915329c2ff91e55b2b6f 179 PANTHER PTHR34610:SF3 24 150 3.5E-18 T 22-04-2016 RMET_RS04915 970590e4e7a7915329c2ff91e55b2b6f 179 SUPERFAMILY SSF88723 28 149 3.92E-11 T 22-04-2016 IPR029060 PIN domain-like RMET_RS04915 970590e4e7a7915329c2ff91e55b2b6f 179 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 28 147 6.7E-9 T 22-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 SUPERFAMILY SSF48179 597 691 5.7E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 603 689 6.6E-8 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 475 567 5.5E-24 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 SUPERFAMILY SSF51735 291 470 1.48E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 PANTHER PTHR23309:SF9 1 688 0.0 T 22-04-2016 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 Gene3D G3DSA:1.10.1040.10 477 568 2.5E-19 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 Gene3D G3DSA:1.10.1040.10 609 690 2.9E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 SUPERFAMILY SSF48179 474 616 8.5E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 Gene3D G3DSA:3.40.50.720 288 476 7.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 PANTHER PTHR23309 1 688 0.0 T 22-04-2016 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 295 470 4.8E-62 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 Gene3D G3DSA:3.90.226.10 3 277 6.8E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 SUPERFAMILY SSF52096 4 286 9.0E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS09285 b0eaac7edcd2537462bd042d7cacd471 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 191 8.2E-36 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS10645 969d16653563426a9365f528bc5f6311 301 Pfam PF03466 LysR substrate binding domain 92 292 1.9E-37 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS10645 969d16653563426a9365f528bc5f6311 301 PANTHER PTHR30419 1 294 2.2E-92 T 22-04-2016 RMET_RS10645 969d16653563426a9365f528bc5f6311 301 Gene3D G3DSA:1.10.10.10 7 91 2.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10645 969d16653563426a9365f528bc5f6311 301 Gene3D G3DSA:3.40.190.10 180 266 2.7E-19 T 22-04-2016 RMET_RS10645 969d16653563426a9365f528bc5f6311 301 Gene3D G3DSA:3.40.190.10 94 179 1.1E-22 T 22-04-2016 RMET_RS10645 969d16653563426a9365f528bc5f6311 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.6E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS10645 969d16653563426a9365f528bc5f6311 301 SUPERFAMILY SSF46785 5 116 6.53E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10645 969d16653563426a9365f528bc5f6311 301 PANTHER PTHR30419:SF2 1 294 2.2E-92 T 22-04-2016 RMET_RS10645 969d16653563426a9365f528bc5f6311 301 SUPERFAMILY SSF53850 93 296 1.72E-41 T 22-04-2016 RMET_RS07545 f0204240e3f7462a1e6c46af78c52f34 785 Gene3D G3DSA:3.40.50.410 596 774 1.0E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A RMET_RS07545 f0204240e3f7462a1e6c46af78c52f34 785 PANTHER PTHR41248 122 785 6.1E-22 T 22-04-2016 RMET_RS07545 f0204240e3f7462a1e6c46af78c52f34 785 SMART SM00327 593 774 3.3E-4 T 22-04-2016 IPR002035 von Willebrand factor, type A RMET_RS07545 f0204240e3f7462a1e6c46af78c52f34 785 Pfam PF00092 von Willebrand factor type A domain 596 762 2.6E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A RMET_RS07545 f0204240e3f7462a1e6c46af78c52f34 785 SUPERFAMILY SSF53300 595 779 3.86E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A RMET_RS07545 f0204240e3f7462a1e6c46af78c52f34 785 PANTHER PTHR41248:SF1 122 785 6.1E-22 T 22-04-2016 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 SUPERFAMILY SSF56784 3 224 1.6E-46 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 Gene3D G3DSA:3.40.50.1000 90 225 5.0E-34 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 6 189 5.8E-25 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 97 198 9.6E-10 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 Gene3D G3DSA:1.10.150.240 18 89 3.7E-27 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 PANTHER PTHR12725 1 225 5.1E-19 T 22-04-2016 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 4 204 1.1E-67 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.2E-30 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.2E-30 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 30 43 1.2E-30 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 1.2E-30 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 1.2E-30 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS07000 19bb69a4b47a43e543870e3ff6380381 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 1.2E-30 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS06340 5486fdf123c20fcd5aa772155df44683 195 Gene3D G3DSA:2.10.109.10 64 115 2.1E-9 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS06340 5486fdf123c20fcd5aa772155df44683 195 Gene3D G3DSA:2.10.109.10 153 192 2.1E-9 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS06340 5486fdf123c20fcd5aa772155df44683 195 SUPERFAMILY SSF51306 68 190 2.14E-19 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RMET_RS06340 5486fdf123c20fcd5aa772155df44683 195 Pfam PF10502 Signal peptidase, peptidase S26 46 191 8.4E-53 T 22-04-2016 IPR019533 Peptidase S26 RMET_RS01440 7a867cc422e246f971ecf251e8c29f78 454 PANTHER PTHR11851:SF140 38 450 4.0E-77 T 22-04-2016 RMET_RS01440 7a867cc422e246f971ecf251e8c29f78 454 SUPERFAMILY SSF63411 37 261 5.94E-37 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RMET_RS01440 7a867cc422e246f971ecf251e8c29f78 454 SUPERFAMILY SSF63411 272 454 1.32E-47 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RMET_RS01440 7a867cc422e246f971ecf251e8c29f78 454 Gene3D G3DSA:3.30.830.10 275 450 1.6E-35 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RMET_RS01440 7a867cc422e246f971ecf251e8c29f78 454 Gene3D G3DSA:3.30.830.10 42 236 1.9E-31 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RMET_RS01440 7a867cc422e246f971ecf251e8c29f78 454 Pfam PF05193 Peptidase M16 inactive domain 208 385 2.3E-32 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RMET_RS01440 7a867cc422e246f971ecf251e8c29f78 454 PANTHER PTHR11851 38 450 4.0E-77 T 22-04-2016 RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 Gene3D G3DSA:3.40.710.10 278 515 3.8E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 337 359 8.8E-24 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 473 486 8.8E-24 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 411 425 8.8E-24 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 396 410 8.8E-24 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 104 123 8.8E-24 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 PANTHER PTHR30023 25 514 8.2E-67 T 22-04-2016 RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 75 512 2.8E-81 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 SUPERFAMILY SSF56601 62 515 3.04E-100 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RMET_RS02570 620f699101bc53953cc3cb9849b023b0 518 PANTHER PTHR30023:SF0 25 514 8.2E-67 T 22-04-2016 RMET_RS16530 b76532f8dafff103f9e113db7a194a67 72 PANTHER PTHR33370 1 72 4.5E-47 T 22-04-2016 RMET_RS16530 b76532f8dafff103f9e113db7a194a67 72 SMART SM00316 2 72 0.0018 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS16530 b76532f8dafff103f9e113db7a194a67 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.907 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RMET_RS16530 b76532f8dafff103f9e113db7a194a67 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.3E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RMET_RS16530 b76532f8dafff103f9e113db7a194a67 72 SUPERFAMILY SSF50249 1 70 5.43E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS16530 b76532f8dafff103f9e113db7a194a67 72 Gene3D G3DSA:2.40.50.140 1 72 2.3E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS16530 b76532f8dafff103f9e113db7a194a67 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.3E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RMET_RS12225 07423008aa14800bbd9b7910565777fa 127 SUPERFAMILY SSF50022 9 115 7.33E-20 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS12225 07423008aa14800bbd9b7910565777fa 127 Pfam PF00355 Rieske [2Fe-2S] domain 27 99 8.2E-7 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS12225 07423008aa14800bbd9b7910565777fa 127 Gene3D G3DSA:2.102.10.10 8 117 3.7E-15 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS12225 07423008aa14800bbd9b7910565777fa 127 PANTHER PTHR40261:SF2 31 114 2.1E-20 T 22-04-2016 RMET_RS12225 07423008aa14800bbd9b7910565777fa 127 PANTHER PTHR40261 31 114 2.1E-20 T 22-04-2016 RMET_RS16545 d4f3addb785a9da8c910a4c6aef5ca25 60 PANTHER PTHR15892 4 58 2.4E-24 T 22-04-2016 RMET_RS16545 d4f3addb785a9da8c910a4c6aef5ca25 60 PIRSF PIRSF002211 1 60 1.6E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16545 d4f3addb785a9da8c910a4c6aef5ca25 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 58 1.8E-24 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16545 d4f3addb785a9da8c910a4c6aef5ca25 60 Pfam PF00327 Ribosomal protein L30p/L7e 7 56 2.6E-18 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RMET_RS16545 d4f3addb785a9da8c910a4c6aef5ca25 60 Gene3D G3DSA:3.30.1390.20 4 58 7.8E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RMET_RS16545 d4f3addb785a9da8c910a4c6aef5ca25 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 20.388 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RMET_RS16545 d4f3addb785a9da8c910a4c6aef5ca25 60 SUPERFAMILY SSF55129 4 58 3.53E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RMET_RS08195 b43e3e820c128ea82f219f5ceb25dec2 161 SUPERFAMILY SSF51316 1 155 1.88E-30 T 22-04-2016 IPR011057 Mss4-like RMET_RS08195 b43e3e820c128ea82f219f5ceb25dec2 161 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 113 1.6E-8 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 RMET_RS08195 b43e3e820c128ea82f219f5ceb25dec2 161 Gene3D G3DSA:3.90.1590.10 1 158 1.1E-25 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 RMET_RS08195 b43e3e820c128ea82f219f5ceb25dec2 161 PANTHER PTHR33337 1 160 2.3E-14 T 22-04-2016 RMET_RS00420 0ad3c2e04e10653a3ccea0426b654322 326 PANTHER PTHR11820 8 323 2.3E-130 T 22-04-2016 RMET_RS00420 0ad3c2e04e10653a3ccea0426b654322 326 PANTHER PTHR11820:SF85 8 323 2.3E-130 T 22-04-2016 RMET_RS00420 0ad3c2e04e10653a3ccea0426b654322 326 Gene3D G3DSA:3.90.850.10 67 307 1.8E-40 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS00420 0ad3c2e04e10653a3ccea0426b654322 326 SUPERFAMILY SSF56529 77 323 1.7E-60 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS00420 0ad3c2e04e10653a3ccea0426b654322 326 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 5.7E-40 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS31735 1c3f0fed2ddbab778b149242a76cd866 65 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 19 56 1.0E-10 T 22-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 RMET_RS31735 1c3f0fed2ddbab778b149242a76cd866 65 Pfam PF06099 Phenol hydroxylase subunit 16 64 3.4E-19 T 22-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 SUPERFAMILY SSF52833 105 248 1.16E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 PANTHER PTHR35272 5 247 1.6E-33 T 22-04-2016 RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 Gene3D G3DSA:3.40.30.10 122 249 7.8E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 PANTHER PTHR35272:SF3 5 247 1.6E-33 T 22-04-2016 RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 SUPERFAMILY SSF54423 45 97 4.51E-12 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 Pfam PF10411 Disulfide bond isomerase protein N-terminus 43 97 2.3E-20 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 Pfam PF13098 Thioredoxin-like domain 126 246 7.1E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 Gene3D G3DSA:3.10.450.70 40 101 2.2E-19 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RMET_RS15995 6aaab8055f3b738bddc56bd11c5799a1 252 ProSitePatterns PS00194 Thioredoxin family active site. 133 151 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS02485 725f684c7b50eb30c39e7a0ee3de0f69 340 Gene3D G3DSA:3.40.50.2000 3 150 1.5E-50 T 22-04-2016 RMET_RS02485 725f684c7b50eb30c39e7a0ee3de0f69 340 SUPERFAMILY SSF53756 2 338 1.33E-94 T 22-04-2016 RMET_RS02485 725f684c7b50eb30c39e7a0ee3de0f69 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 317 1.6E-64 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RMET_RS02485 725f684c7b50eb30c39e7a0ee3de0f69 340 PANTHER PTHR30160:SF7 1 339 2.8E-82 T 22-04-2016 RMET_RS02485 725f684c7b50eb30c39e7a0ee3de0f69 340 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 337 2.4E-138 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RMET_RS02485 725f684c7b50eb30c39e7a0ee3de0f69 340 PANTHER PTHR30160 1 339 2.8E-82 T 22-04-2016 RMET_RS02485 725f684c7b50eb30c39e7a0ee3de0f69 340 Gene3D G3DSA:3.40.50.2000 166 338 1.4E-52 T 22-04-2016 RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 Pfam PF09397 Ftsk gamma domain 1058 1118 1.2E-26 T 22-04-2016 IPR018541 FtsK gamma domain RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 Pfam PF01580 FtsK/SpoIIIE family 743 952 8.0E-68 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 SUPERFAMILY SSF52540 719 1025 1.25E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 PANTHER PTHR22683 309 1119 1.0E-245 T 22-04-2016 RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 SMART SM00382 778 973 8.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 PANTHER PTHR22683:SF41 309 1119 1.0E-245 T 22-04-2016 RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 SMART SM00843 1056 1121 2.0E-38 T 22-04-2016 IPR018541 FtsK gamma domain RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 SUPERFAMILY SSF46785 1056 1119 1.45E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08030 66edf1f71a318a649356d5f97f50664e 1123 Gene3D G3DSA:3.40.50.300 716 1019 7.4E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12320 2342945090cfd696eb6d0fb5d7b4f8e6 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 14.892 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS12320 2342945090cfd696eb6d0fb5d7b4f8e6 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 59 2.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS12320 2342945090cfd696eb6d0fb5d7b4f8e6 70 Pfam PF01165 Ribosomal protein S21 4 57 4.9E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS12320 2342945090cfd696eb6d0fb5d7b4f8e6 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 1.0E-9 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS12320 2342945090cfd696eb6d0fb5d7b4f8e6 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.7E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS12320 2342945090cfd696eb6d0fb5d7b4f8e6 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.7E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS12320 2342945090cfd696eb6d0fb5d7b4f8e6 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.7E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS12320 2342945090cfd696eb6d0fb5d7b4f8e6 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.7E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 11 629 36.255 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 221 424 1.3E-20 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 ProSitePatterns PS00194 Thioredoxin family active site. 538 556 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 Pfam PF13899 Thioredoxin-like 520 582 2.1E-11 T 22-04-2016 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 SUPERFAMILY SSF52833 524 626 9.39E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 Gene3D G3DSA:3.40.30.10 517 629 2.3E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 Pfam PF11412 Disulphide bond corrector protein DsbC 38 153 7.2E-34 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 PANTHER PTHR32234:SF0 27 155 1.2E-164 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 PANTHER PTHR32234:SF0 186 633 1.2E-164 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 SUPERFAMILY SSF74863 36 154 5.36E-35 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 PANTHER PTHR32234 27 155 1.2E-164 T 22-04-2016 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 PANTHER PTHR32234 186 633 1.2E-164 T 22-04-2016 RMET_RS16490 aa9273117e769a71b752b143207eedf0 635 Gene3D G3DSA:2.60.40.1250 33 157 6.3E-41 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RMET_RS02640 47a6268129c22933791e1c1010f52538 205 Pfam PF16036 Chalcone isomerase-like 37 204 3.9E-51 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 RMET_RS02640 47a6268129c22933791e1c1010f52538 205 SUPERFAMILY SSF54626 35 204 2.35E-37 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 PANTHER PTHR32071 2 456 8.7E-234 T 22-04-2016 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 Pfam PF00072 Response regulator receiver domain 21 129 8.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 Gene3D G3DSA:1.10.8.60 333 389 6.6E-21 T 22-04-2016 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 1.2E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 1.2E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 373 382 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 SMART SM00382 180 321 4.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 PANTHER PTHR32071:SF11 2 456 8.7E-234 T 22-04-2016 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 Gene3D G3DSA:1.10.10.60 404 456 2.2E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 SUPERFAMILY SSF46689 373 456 5.38E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 246 261 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 Gene3D G3DSA:3.40.50.300 159 332 6.5E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 184 197 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 SUPERFAMILY SSF52540 160 389 1.18E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 Pfam PF00158 Sigma-54 interaction domain 160 326 1.1E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 SMART SM00448 19 130 3.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 Gene3D G3DSA:3.40.50.2300 19 140 1.1E-34 T 22-04-2016 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 Pfam PF02954 Bacterial regulatory protein, Fis family 414 454 1.5E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS02970 49e8bb379eff0f0243ddd60221e15593 458 SUPERFAMILY SSF52172 19 204 2.42E-41 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS06975 445f3e0978c30e893e61382503200e0c 320 Gene3D G3DSA:3.40.50.1820 14 296 1.4E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06975 445f3e0978c30e893e61382503200e0c 320 PANTHER PTHR10992 7 297 3.7E-36 T 22-04-2016 RMET_RS06975 445f3e0978c30e893e61382503200e0c 320 Pfam PF00561 alpha/beta hydrolase fold 39 280 3.8E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06975 445f3e0978c30e893e61382503200e0c 320 SUPERFAMILY SSF53474 14 296 4.37E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06975 445f3e0978c30e893e61382503200e0c 320 PANTHER PTHR10992:SF778 7 297 3.7E-36 T 22-04-2016 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 Pfam PF00890 FAD binding domain 4 383 7.8E-105 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 Gene3D G3DSA:3.90.700.10 235 339 8.4E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 PANTHER PTHR11632:SF27 2 534 1.4E-253 T 22-04-2016 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 SUPERFAMILY SSF51905 2 246 1.47E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 SUPERFAMILY SSF51905 347 439 1.47E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 Gene3D G3DSA:1.20.58.100 408 513 2.6E-33 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 Gene3D G3DSA:3.50.50.60 340 400 1.3E-102 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 Gene3D G3DSA:3.50.50.60 2 234 1.3E-102 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 432 512 2.4E-13 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 2 511 1.2E-199 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.8E-6 T 22-04-2016 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 2.8E-6 T 22-04-2016 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 PANTHER PTHR11632 2 534 1.4E-253 T 22-04-2016 RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 SUPERFAMILY SSF56425 229 344 1.33E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RMET_RS14400 5ba014b4ebf05684cbf1bc747ddf9d93 535 SUPERFAMILY SSF46977 417 517 8.37E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RMET_RS14145 5dcac4500888e34dcf803fe2bfea1549 379 Pfam PF05175 Methyltransferase small domain 204 316 3.5E-10 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RMET_RS14145 5dcac4500888e34dcf803fe2bfea1549 379 Gene3D G3DSA:3.40.50.150 176 351 5.2E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14145 5dcac4500888e34dcf803fe2bfea1549 379 PANTHER PTHR18895 206 335 3.3E-18 T 22-04-2016 RMET_RS14145 5dcac4500888e34dcf803fe2bfea1549 379 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 268 274 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RMET_RS14145 5dcac4500888e34dcf803fe2bfea1549 379 SUPERFAMILY SSF53335 162 318 2.64E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01320 9de05a826616e03439c95f0eac990c8c 333 PANTHER PTHR13090 56 303 3.2E-31 T 22-04-2016 RMET_RS01320 9de05a826616e03439c95f0eac990c8c 333 PANTHER PTHR13090:SF3 56 303 3.2E-31 T 22-04-2016 RMET_RS01320 9de05a826616e03439c95f0eac990c8c 333 SUPERFAMILY SSF53335 61 304 6.88E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01320 9de05a826616e03439c95f0eac990c8c 333 Pfam PF08241 Methyltransferase domain 81 188 1.2E-19 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RMET_RS01320 9de05a826616e03439c95f0eac990c8c 333 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 35 304 26.096 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 RMET_RS01320 9de05a826616e03439c95f0eac990c8c 333 Gene3D G3DSA:3.40.50.150 73 304 1.6E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS00430 42f387690dbc71522390f949c5eafbea 324 Pfam PF11306 Protein of unknown function (DUF3108) 94 314 1.4E-23 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 RMET_RS00430 42f387690dbc71522390f949c5eafbea 324 PRINTS PR01217 Proline rich extensin signature 91 116 5.3E-12 T 22-04-2016 RMET_RS00430 42f387690dbc71522390f949c5eafbea 324 PRINTS PR01217 Proline rich extensin signature 52 69 5.3E-12 T 22-04-2016 RMET_RS00430 42f387690dbc71522390f949c5eafbea 324 PRINTS PR01217 Proline rich extensin signature 34 50 5.3E-12 T 22-04-2016 RMET_RS00430 42f387690dbc71522390f949c5eafbea 324 PRINTS PR01217 Proline rich extensin signature 11 32 5.3E-12 T 22-04-2016 RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 PANTHER PTHR11592 54 208 1.7E-62 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 Pfam PF00255 Glutathione peroxidase 63 159 1.4E-30 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 PANTHER PTHR11592:SF40 54 208 1.7E-62 T 22-04-2016 RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 Gene3D G3DSA:3.40.30.10 55 206 9.0E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 SUPERFAMILY SSF52833 55 205 3.83E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 PRINTS PR01011 Glutathione peroxidase family signature 107 123 5.0E-13 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 PRINTS PR01011 Glutathione peroxidase family signature 72 89 5.0E-13 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 PRINTS PR01011 Glutathione peroxidase family signature 167 176 5.0E-13 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RMET_RS00105 05220b5e53109898a7ac123447e2715b 208 ProSitePatterns PS00460 Glutathione peroxidases active site. 74 89 - T 22-04-2016 IPR029759 Glutathione peroxidase active site RMET_RS04780 c3fc39b6c661a0af3100cb2534ad2aca 214 Gene3D G3DSA:1.20.120.80 32 212 5.4E-53 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RMET_RS04780 c3fc39b6c661a0af3100cb2534ad2aca 214 PANTHER PTHR11403:SF2 18 214 1.4E-109 T 22-04-2016 RMET_RS04780 c3fc39b6c661a0af3100cb2534ad2aca 214 Pfam PF00510 Cytochrome c oxidase subunit III 33 212 1.1E-17 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RMET_RS04780 c3fc39b6c661a0af3100cb2534ad2aca 214 PANTHER PTHR11403 18 214 1.4E-109 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RMET_RS04780 c3fc39b6c661a0af3100cb2534ad2aca 214 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 35 214 1.9E-84 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 RMET_RS04780 c3fc39b6c661a0af3100cb2534ad2aca 214 SUPERFAMILY SSF81452 18 212 1.16E-58 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RMET_RS10710 d044d44077defcf4732afc23959a2439 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 424 5.8E-73 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS10710 d044d44077defcf4732afc23959a2439 449 PANTHER PTHR11206 6 444 3.1E-93 T 22-04-2016 RMET_RS10710 d044d44077defcf4732afc23959a2439 449 PIRSF PIRSF006603 8 448 2.0E-51 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS10710 d044d44077defcf4732afc23959a2439 449 Pfam PF01554 MatE 243 403 6.4E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS10710 d044d44077defcf4732afc23959a2439 449 Pfam PF01554 MatE 17 176 1.2E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS10710 d044d44077defcf4732afc23959a2439 449 PANTHER PTHR11206:SF153 6 444 3.1E-93 T 22-04-2016 RMET_RS15890 134237fbfaec6ac1e1faa59e860939db 493 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 24 93 1.4E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15890 134237fbfaec6ac1e1faa59e860939db 493 Pfam PF02239 Cytochrome D1 heme domain 130 484 3.0E-115 T 22-04-2016 RMET_RS15890 134237fbfaec6ac1e1faa59e860939db 493 SUPERFAMILY SSF46626 14 118 7.86E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15890 134237fbfaec6ac1e1faa59e860939db 493 Gene3D G3DSA:1.10.760.10 21 97 3.4E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15890 134237fbfaec6ac1e1faa59e860939db 493 SUPERFAMILY SSF51004 103 486 4.97E-80 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RMET_RS15890 134237fbfaec6ac1e1faa59e860939db 493 Gene3D G3DSA:2.140.10.20 237 480 2.4E-55 T 22-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain RMET_RS15890 134237fbfaec6ac1e1faa59e860939db 493 Gene3D G3DSA:2.130.10.10 120 236 6.8E-14 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RMET_RS14570 1c63ed42cc0a2b83b26cc72dc5b7ee34 219 Pfam PF09335 SNARE associated Golgi protein 49 173 7.1E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein RMET_RS14570 1c63ed42cc0a2b83b26cc72dc5b7ee34 219 PANTHER PTHR30353:SF0 1 205 1.1E-73 T 22-04-2016 RMET_RS14570 1c63ed42cc0a2b83b26cc72dc5b7ee34 219 PANTHER PTHR30353 1 205 1.1E-73 T 22-04-2016 IPR032818 DedA family RMET_RS01210 2240eba3098175ba164dd6438a2fba51 85 Pfam PF04380 Membrane fusogenic activity 1 74 2.8E-30 T 22-04-2016 IPR007475 Membrane fusogenic activity RMET_RS01210 2240eba3098175ba164dd6438a2fba51 85 PANTHER PTHR38040 1 81 1.9E-21 T 22-04-2016 RMET_RS01210 2240eba3098175ba164dd6438a2fba51 85 PANTHER PTHR38040:SF1 1 81 1.9E-21 T 22-04-2016 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 Gene3D G3DSA:3.90.190.20 359 493 6.9E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 Pfam PF02875 Mur ligase family, glutamate ligase domain 359 431 2.2E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 494 4.1E-113 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 PANTHER PTHR23135:SF2 4 497 4.8E-134 T 22-04-2016 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 Pfam PF08245 Mur ligase middle domain 127 338 3.3E-31 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 PANTHER PTHR23135 4 497 4.8E-134 T 22-04-2016 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 SUPERFAMILY SSF53244 357 496 1.03E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 Gene3D G3DSA:3.40.1190.10 294 357 7.9E-72 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 Gene3D G3DSA:3.40.1190.10 102 262 7.9E-72 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 125 149 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 SUPERFAMILY SSF53623 122 264 1.96E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 SUPERFAMILY SSF53623 298 355 1.96E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 496 32.784 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 SUPERFAMILY SSF51984 6 102 1.09E-13 T 22-04-2016 RMET_RS15675 a506e34374db7247ac979bb40c1510c5 504 Gene3D G3DSA:3.40.50.720 6 101 4.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15775 e0a5246dd86172e312f3f3b314c60ede 385 PIRSF PIRSF029285 2 360 1.3E-149 T 22-04-2016 IPR014553 Predicted aminopeptidase RMET_RS15775 e0a5246dd86172e312f3f3b314c60ede 385 Pfam PF10023 Putative aminopeptidase 30 353 9.9E-136 T 22-04-2016 IPR014553 Predicted aminopeptidase RMET_RS00730 0b660fb940ade00c630a4d01779fcbce 390 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 30 380 1.8E-138 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RMET_RS00730 0b660fb940ade00c630a4d01779fcbce 390 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 16 383 48.259 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RMET_RS00730 0b660fb940ade00c630a4d01779fcbce 390 PIRSF PIRSF000443 7 389 6.2E-139 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RMET_RS00730 0b660fb940ade00c630a4d01779fcbce 390 PANTHER PTHR32268:SF11 14 388 4.0E-166 T 22-04-2016 RMET_RS00730 0b660fb940ade00c630a4d01779fcbce 390 Pfam PF00561 alpha/beta hydrolase fold 59 369 1.1E-33 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS00730 0b660fb940ade00c630a4d01779fcbce 390 SUPERFAMILY SSF53474 21 379 1.01E-99 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00730 0b660fb940ade00c630a4d01779fcbce 390 Gene3D G3DSA:3.40.50.1820 41 378 1.9E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00730 0b660fb940ade00c630a4d01779fcbce 390 PANTHER PTHR32268 14 388 4.0E-166 T 22-04-2016 RMET_RS03665 da29e8f38e15dfe736bce9c1bc5b5265 109 Gene3D G3DSA:1.10.150.280 23 85 1.7E-16 T 22-04-2016 RMET_RS03665 da29e8f38e15dfe736bce9c1bc5b5265 109 SUPERFAMILY SSF47781 15 85 6.34E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RMET_RS03665 da29e8f38e15dfe736bce9c1bc5b5265 109 SMART SM00278 35 54 1.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RMET_RS03665 da29e8f38e15dfe736bce9c1bc5b5265 109 SMART SM00278 66 85 42.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RMET_RS03665 da29e8f38e15dfe736bce9c1bc5b5265 109 PANTHER PTHR21180 15 83 7.3E-13 T 22-04-2016 RMET_RS03665 da29e8f38e15dfe736bce9c1bc5b5265 109 Pfam PF12836 Helix-hairpin-helix motif 27 82 7.2E-15 T 22-04-2016 RMET_RS11340 35753127ebaa816eaa5556fbb89edec0 391 SMART SM00331 158 390 0.0012 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS11340 35753127ebaa816eaa5556fbb89edec0 391 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 182 389 3.5E-18 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS11340 35753127ebaa816eaa5556fbb89edec0 391 SUPERFAMILY SSF54631 5 83 6.08E-5 T 22-04-2016 RMET_RS11340 35753127ebaa816eaa5556fbb89edec0 391 Gene3D G3DSA:3.10.580.10 4 109 1.3E-5 T 22-04-2016 RMET_RS02145 79a461d1e32e493fdb87e9a82f77530f 392 SUPERFAMILY SSF51695 51 383 2.01E-78 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RMET_RS02145 79a461d1e32e493fdb87e9a82f77530f 392 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 57 378 5.4E-50 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RMET_RS02145 79a461d1e32e493fdb87e9a82f77530f 392 PANTHER PTHR23344 53 382 1.1E-106 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RMET_RS02145 79a461d1e32e493fdb87e9a82f77530f 392 PANTHER PTHR23344:SF7 53 382 1.1E-106 T 22-04-2016 RMET_RS02145 79a461d1e32e493fdb87e9a82f77530f 392 Gene3D G3DSA:3.20.20.190 52 384 1.1E-88 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RMET_RS13200 9e38cc8949713794bf5901c32fe904a0 139 Pfam PF11191 Protein of unknown function (DUF2782) 56 123 3.8E-6 T 22-04-2016 IPR021357 Protein of unknown function DUF2782 RMET_RS02115 b8e24662e244f4aaca24fdd6e78654ca 215 SUPERFAMILY SSF49777 1 207 4.32E-40 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RMET_RS02115 b8e24662e244f4aaca24fdd6e78654ca 215 Gene3D G3DSA:3.90.280.10 1 213 9.5E-63 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RMET_RS02115 b8e24662e244f4aaca24fdd6e78654ca 215 PANTHER PTHR30289 1 214 1.4E-27 T 22-04-2016 RMET_RS02115 b8e24662e244f4aaca24fdd6e78654ca 215 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 79 207 4.7E-19 T 22-04-2016 IPR005247 YbhB/YbcL RMET_RS02115 b8e24662e244f4aaca24fdd6e78654ca 215 Pfam PF01161 Phosphatidylethanolamine-binding protein 32 207 1.0E-35 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RMET_RS04360 f65f668da454a52de4871b86d997b7d7 300 SUPERFAMILY SSF51197 106 228 3.84E-17 T 22-04-2016 RMET_RS04360 f65f668da454a52de4871b86d997b7d7 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 7.8E-47 T 22-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 RMET_RS04360 f65f668da454a52de4871b86d997b7d7 300 Gene3D G3DSA:2.60.120.330 126 223 5.5E-16 T 22-04-2016 IPR027443 Isopenicillin N synthase-like RMET_RS04360 f65f668da454a52de4871b86d997b7d7 300 PANTHER PTHR12366:SF25 13 244 6.2E-139 T 22-04-2016 RMET_RS04360 f65f668da454a52de4871b86d997b7d7 300 PANTHER PTHR12366 13 244 6.2E-139 T 22-04-2016 RMET_RS02365 f50c2c66e345bcfd342264a889a45c87 156 Gene3D G3DSA:1.10.10.10 7 53 3.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02365 f50c2c66e345bcfd342264a889a45c87 156 Gene3D G3DSA:1.10.10.10 101 148 9.9E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02365 f50c2c66e345bcfd342264a889a45c87 156 Pfam PF02631 RecX family 31 145 8.5E-21 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RMET_RS02365 f50c2c66e345bcfd342264a889a45c87 156 PANTHER PTHR33602 8 153 1.9E-16 T 22-04-2016 RMET_RS02365 f50c2c66e345bcfd342264a889a45c87 156 Hamap MF_01114 Regulatory protein RecX [recX]. 3 150 11.854 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RMET_RS07010 e49dc65d8db908aeb8c9b53500521312 136 Gene3D G3DSA:3.10.180.10 4 124 4.6E-18 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS07010 e49dc65d8db908aeb8c9b53500521312 136 SUPERFAMILY SSF54593 5 126 2.01E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS10115 3b5df306a276946cd049d5593d97167a 186 SUPERFAMILY SSF52218 7 176 1.41E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS10115 3b5df306a276946cd049d5593d97167a 186 Pfam PF03358 NADPH-dependent FMN reductase 7 148 1.6E-35 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RMET_RS10115 3b5df306a276946cd049d5593d97167a 186 PANTHER PTHR30543 1 182 1.3E-54 T 22-04-2016 RMET_RS10115 3b5df306a276946cd049d5593d97167a 186 PANTHER PTHR30543:SF6 1 182 1.3E-54 T 22-04-2016 RMET_RS10115 3b5df306a276946cd049d5593d97167a 186 Gene3D G3DSA:3.40.50.360 2 183 9.5E-51 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS06940 ef469fa2513cb4c0ced17f3616285216 305 SUPERFAMILY SSF161098 35 286 8.63E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06940 ef469fa2513cb4c0ced17f3616285216 305 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 38 294 7.1E-100 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RMET_RS06940 ef469fa2513cb4c0ced17f3616285216 305 PANTHER PTHR30406:SF1 22 302 5.2E-168 T 22-04-2016 RMET_RS06940 ef469fa2513cb4c0ced17f3616285216 305 Gene3D G3DSA:1.10.3720.10 41 297 1.5E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06940 ef469fa2513cb4c0ced17f3616285216 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 292 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06940 ef469fa2513cb4c0ced17f3616285216 305 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 37 295 1.6E-127 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 RMET_RS06940 ef469fa2513cb4c0ced17f3616285216 305 PANTHER PTHR30406 22 302 5.2E-168 T 22-04-2016 RMET_RS14000 f6f91ebd09284a02cfd1e46bc89afa39 671 Gene3D G3DSA:2.40.170.20 205 669 9.8E-83 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS14000 f6f91ebd09284a02cfd1e46bc89afa39 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 99 199 4.6E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS14000 f6f91ebd09284a02cfd1e46bc89afa39 671 Pfam PF00593 TonB dependent receptor 454 666 1.6E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS14000 f6f91ebd09284a02cfd1e46bc89afa39 671 SUPERFAMILY SSF56935 82 668 4.71E-109 T 22-04-2016 RMET_RS14000 f6f91ebd09284a02cfd1e46bc89afa39 671 PANTHER PTHR32552 278 670 7.1E-47 T 22-04-2016 RMET_RS14000 f6f91ebd09284a02cfd1e46bc89afa39 671 PANTHER PTHR32552 14 257 7.1E-47 T 22-04-2016 RMET_RS14000 f6f91ebd09284a02cfd1e46bc89afa39 671 Gene3D G3DSA:2.170.130.10 70 204 5.4E-37 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS02195 4deee70dfba387cd2fe80576387f84db 265 PANTHER PTHR34979 4 251 3.8E-42 T 22-04-2016 RMET_RS02195 4deee70dfba387cd2fe80576387f84db 265 Pfam PF03591 AzlC protein 32 174 3.8E-40 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease RMET_RS03065 2c7fcc373369bee21e5c4f764286ff43 569 Pfam PF01740 STAS domain 460 562 3.7E-10 T 22-04-2016 IPR002645 STAS domain RMET_RS03065 2c7fcc373369bee21e5c4f764286ff43 569 SUPERFAMILY SSF52091 460 558 4.91E-13 T 22-04-2016 IPR002645 STAS domain RMET_RS03065 2c7fcc373369bee21e5c4f764286ff43 569 Gene3D G3DSA:3.30.750.24 460 554 2.4E-12 T 22-04-2016 IPR002645 STAS domain RMET_RS03065 2c7fcc373369bee21e5c4f764286ff43 569 PANTHER PTHR11814 24 565 7.0E-141 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 RMET_RS03065 2c7fcc373369bee21e5c4f764286ff43 569 Pfam PF00916 Sulfate permease family 39 402 7.6E-86 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 87 97 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 Gene3D G3DSA:2.60.40.200 46 189 2.5E-54 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 177 188 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 87 109 1.3E-9 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 144 166 1.3E-9 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 124 133 1.3E-9 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 PANTHER PTHR10003 37 191 5.1E-49 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 SUPERFAMILY SSF49329 45 188 4.45E-48 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS13835 7d8fc5e51b46a32c278e09a6fe8f1f90 191 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 55 188 1.5E-45 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RMET_RS05115 d78d1be6db938f375eda3d11eaaee574 414 Pfam PF06850 PHB de-polymerase C-terminus 211 412 8.3E-97 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal RMET_RS05115 d78d1be6db938f375eda3d11eaaee574 414 PIRSF PIRSF020818 1 414 4.2E-196 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RMET_RS05115 d78d1be6db938f375eda3d11eaaee574 414 Gene3D G3DSA:3.40.50.1820 106 411 4.7E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05115 d78d1be6db938f375eda3d11eaaee574 414 SUPERFAMILY SSF53474 107 410 1.05E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05115 d78d1be6db938f375eda3d11eaaee574 414 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 412 6.1E-179 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RMET_RS04535 d4d25759bc9a9fd00ccffa96ee7cf5c1 194 Gene3D G3DSA:1.20.58.320 3 87 4.3E-26 T 22-04-2016 RMET_RS04535 d4d25759bc9a9fd00ccffa96ee7cf5c1 194 PANTHER PTHR23004 25 194 8.5E-64 T 22-04-2016 RMET_RS04535 d4d25759bc9a9fd00ccffa96ee7cf5c1 194 SUPERFAMILY SSF48452 3 190 3.26E-59 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS04535 d4d25759bc9a9fd00ccffa96ee7cf5c1 194 Pfam PF06041 Bacterial protein of unknown function (DUF924) 8 191 9.3E-58 T 22-04-2016 IPR010323 Protein of unknown function DUF924 RMET_RS04535 d4d25759bc9a9fd00ccffa96ee7cf5c1 194 Gene3D G3DSA:1.25.40.10 88 194 2.0E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS04535 d4d25759bc9a9fd00ccffa96ee7cf5c1 194 PANTHER PTHR23004:SF7 25 194 8.5E-64 T 22-04-2016 RMET_RS00970 02bec481d931ed3c3afb03d8ae70e88d 198 Pfam PF14341 PilX N-terminal 17 66 2.9E-12 T 22-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain RMET_RS00970 02bec481d931ed3c3afb03d8ae70e88d 198 Pfam PF13681 Type IV pilus assembly protein PilX C-term 98 187 1.9E-9 T 22-04-2016 IPR025205 PilX/PilW C-terminal domain RMET_RS04285 b6ee7424726463e019c369a45a655cee 304 PANTHER PTHR13832:SF278 12 263 5.2E-33 T 22-04-2016 RMET_RS04285 b6ee7424726463e019c369a45a655cee 304 PANTHER PTHR13832 12 263 5.2E-33 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 RMET_RS04285 b6ee7424726463e019c369a45a655cee 304 SMART SM00331 9 243 3.3E-12 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS04285 b6ee7424726463e019c369a45a655cee 304 SMART SM00332 1 241 1.3E-8 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS04285 b6ee7424726463e019c369a45a655cee 304 Pfam PF13672 Protein phosphatase 2C 9 201 4.2E-12 T 22-04-2016 RMET_RS04285 b6ee7424726463e019c369a45a655cee 304 SUPERFAMILY SSF81606 1 243 1.57E-50 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS04285 b6ee7424726463e019c369a45a655cee 304 Gene3D G3DSA:3.60.40.10 2 241 3.9E-50 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RMET_RS15310 52d9cb827b600b1b29ba39c7b5eda1be 312 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 222 301 2.7E-7 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RMET_RS15310 52d9cb827b600b1b29ba39c7b5eda1be 312 SUPERFAMILY SSF74653 183 304 3.53E-14 T 22-04-2016 RMET_RS15310 52d9cb827b600b1b29ba39c7b5eda1be 312 Gene3D G3DSA:3.30.1150.10 187 304 2.7E-13 T 22-04-2016 RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 PANTHER PTHR30537:SF5 1 299 1.3E-106 T 22-04-2016 RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 SUPERFAMILY SSF46785 4 85 2.29E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 Gene3D G3DSA:3.40.190.10 92 176 4.3E-22 T 22-04-2016 RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 Pfam PF03466 LysR substrate binding domain 90 293 7.8E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 Gene3D G3DSA:3.40.190.10 177 261 3.2E-20 T 22-04-2016 RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 PANTHER PTHR30537 1 299 1.3E-106 T 22-04-2016 RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 Gene3D G3DSA:1.10.10.10 3 84 5.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17315 3a192a697129ad0a7c20dc9ad3b75c8d 303 SUPERFAMILY SSF53850 91 297 1.34E-43 T 22-04-2016 RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 Gene3D G3DSA:3.40.50.300 44 175 3.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 855 869 2.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 885 2.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 885 897 2.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 SUPERFAMILY SSF52540 42 238 4.4E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 Pfam PF00196 Bacterial regulatory proteins, luxR family 854 908 3.7E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 SUPERFAMILY SSF46894 845 911 2.11E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 Gene3D G3DSA:1.10.10.10 845 910 4.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 SMART SM00421 852 909 4.0E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS12705 bf0af162fe040f1feddec8653f623458 925 Gene3D G3DSA:1.25.40.10 473 834 2.2E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS04005 74c634133b989d5e8da68fac989fa62b 238 PANTHER PTHR30151:SF23 34 234 3.6E-71 T 22-04-2016 RMET_RS04005 74c634133b989d5e8da68fac989fa62b 238 Gene3D G3DSA:1.10.3720.10 32 219 2.3E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS04005 74c634133b989d5e8da68fac989fa62b 238 SUPERFAMILY SSF161098 37 222 7.85E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS04005 74c634133b989d5e8da68fac989fa62b 238 PANTHER PTHR30151 34 234 3.6E-71 T 22-04-2016 RMET_RS04005 74c634133b989d5e8da68fac989fa62b 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 233 5.7E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08105 bc74a9b034641c76cfd4447acb1c2b68 251 PANTHER PTHR30290 4 251 8.1E-72 T 22-04-2016 RMET_RS08105 bc74a9b034641c76cfd4447acb1c2b68 251 SUPERFAMILY SSF53850 35 251 6.15E-70 T 22-04-2016 RMET_RS08105 bc74a9b034641c76cfd4447acb1c2b68 251 Gene3D G3DSA:3.90.76.10 54 197 2.9E-46 T 22-04-2016 RMET_RS08105 bc74a9b034641c76cfd4447acb1c2b68 251 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 251 1.4E-54 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RMET_RS08105 bc74a9b034641c76cfd4447acb1c2b68 251 Gene3D G3DSA:3.40.190.10 198 251 7.2E-23 T 22-04-2016 RMET_RS14525 acfcdec03e042d44b5463b14b225dc29 146 PANTHER PTHR37953:SF1 4 143 8.1E-28 T 22-04-2016 RMET_RS14525 acfcdec03e042d44b5463b14b225dc29 146 PANTHER PTHR37953 4 143 8.1E-28 T 22-04-2016 RMET_RS14525 acfcdec03e042d44b5463b14b225dc29 146 Pfam PF02643 Uncharacterized ACR, COG1430 38 139 6.1E-34 T 22-04-2016 IPR003795 Protein of unknown function DUF192 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 PANTHER PTHR10836:SF31 1 332 3.3E-227 T 22-04-2016 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 SUPERFAMILY SSF51735 3 167 1.1E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 3.0E-66 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 PANTHER PTHR10836 1 332 3.3E-227 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 1.1E-61 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 SMART SM00846 3 151 7.1E-100 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 Gene3D G3DSA:3.40.50.720 2 159 1.2E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 Gene3D G3DSA:3.30.360.10 160 315 8.3E-81 T 22-04-2016 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 PIRSF PIRSF000149 1 332 6.7E-131 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 SUPERFAMILY SSF55347 150 313 2.08E-73 T 22-04-2016 RMET_RS14935 99a098cadf3ea6dde580973d2b64adcb 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 8.3E-134 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS08475 dae45c7882a1f26e0a84b8c11d3602f6 213 SUPERFAMILY SSF160930 6 161 4.71E-58 T 22-04-2016 RMET_RS08475 dae45c7882a1f26e0a84b8c11d3602f6 213 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 2 188 43.843 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RMET_RS08475 dae45c7882a1f26e0a84b8c11d3602f6 213 Pfam PF05280 Flagellar transcriptional activator (FlhC) 3 173 7.3E-73 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RMET_RS08475 dae45c7882a1f26e0a84b8c11d3602f6 213 PIRSF PIRSF003159 2 182 3.5E-88 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RMET_RS08475 dae45c7882a1f26e0a84b8c11d3602f6 213 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 3 188 6.0E-106 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RMET_RS12895 c2f3db9df7b9c61252273a8d798d7a5c 362 PANTHER PTHR30468:SF6 56 361 1.3E-61 T 22-04-2016 RMET_RS12895 c2f3db9df7b9c61252273a8d798d7a5c 362 PANTHER PTHR30468 56 361 1.3E-61 T 22-04-2016 RMET_RS12895 c2f3db9df7b9c61252273a8d798d7a5c 362 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 235 357 2.3E-41 T 22-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent RMET_RS12895 c2f3db9df7b9c61252273a8d798d7a5c 362 PIRSF PIRSF018005 38 362 2.3E-116 T 22-04-2016 IPR017804 Methyltransferase EgtD-like RMET_RS12895 c2f3db9df7b9c61252273a8d798d7a5c 362 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 62 359 1.5E-112 T 22-04-2016 IPR017804 Methyltransferase EgtD-like RMET_RS12895 c2f3db9df7b9c61252273a8d798d7a5c 362 SUPERFAMILY SSF53335 81 350 4.43E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS04850 9dc1b23eac51172f7502606acb920381 207 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 10 205 5.5E-100 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RMET_RS04850 9dc1b23eac51172f7502606acb920381 207 PANTHER PTHR31715 9 207 3.1E-123 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RMET_RS04850 9dc1b23eac51172f7502606acb920381 207 Hamap MF_01389 Urease accessory protein UreG [ureG]. 8 206 46.919 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RMET_RS04850 9dc1b23eac51172f7502606acb920381 207 Gene3D G3DSA:3.40.50.300 9 200 7.7E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04850 9dc1b23eac51172f7502606acb920381 207 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 182 1.1E-37 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS04850 9dc1b23eac51172f7502606acb920381 207 SUPERFAMILY SSF52540 6 201 3.95E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04850 9dc1b23eac51172f7502606acb920381 207 PIRSF PIRSF005624 2 205 6.3E-48 T 22-04-2016 RMET_RS16680 d4373f5928cec3ec33bded0173d79acf 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.2E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RMET_RS16680 d4373f5928cec3ec33bded0173d79acf 156 PANTHER PTHR11205 1 156 2.1E-85 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RMET_RS16680 d4373f5928cec3ec33bded0173d79acf 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.7E-65 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RMET_RS16680 d4373f5928cec3ec33bded0173d79acf 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 RMET_RS16680 d4373f5928cec3ec33bded0173d79acf 156 PIRSF PIRSF002122 3 156 3.7E-60 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RMET_RS16680 d4373f5928cec3ec33bded0173d79acf 156 SUPERFAMILY SSF47973 2 149 2.09E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RMET_RS16680 d4373f5928cec3ec33bded0173d79acf 156 Gene3D G3DSA:1.10.455.10 7 156 6.3E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RMET_RS16680 d4373f5928cec3ec33bded0173d79acf 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.254 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RMET_RS05415 7dd011078d86fa387cde1c1a4c90ce8c 59 Gene3D G3DSA:3.30.920.30 2 59 1.9E-22 T 22-04-2016 RMET_RS05415 7dd011078d86fa387cde1c1a4c90ce8c 59 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 8.6E-21 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 RMET_RS05415 7dd011078d86fa387cde1c1a4c90ce8c 59 SUPERFAMILY SSF54786 3 59 4.32E-17 T 22-04-2016 RMET_RS10390 f0e2594a2a5c47735821745e70596013 227 PANTHER PTHR30598:SF3 1 227 5.9E-78 T 22-04-2016 RMET_RS10390 f0e2594a2a5c47735821745e70596013 227 PANTHER PTHR30598 1 227 5.9E-78 T 22-04-2016 RMET_RS10390 f0e2594a2a5c47735821745e70596013 227 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 227 5.0E-69 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 RMET_RS10390 f0e2594a2a5c47735821745e70596013 227 SUPERFAMILY SSF103501 1 226 5.89E-63 T 22-04-2016 IPR023234 NarG-like domain RMET_RS10390 f0e2594a2a5c47735821745e70596013 227 Gene3D G3DSA:1.20.950.20 2 214 3.2E-65 T 22-04-2016 RMET_RS10390 f0e2594a2a5c47735821745e70596013 227 Pfam PF02665 Nitrate reductase gamma subunit 5 227 3.6E-79 T 22-04-2016 IPR023234 NarG-like domain RMET_RS25955 e0a0f52a51ed8e1540cfd923807e5467 134 Gene3D G3DSA:1.10.287.130 2 62 1.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS25955 e0a0f52a51ed8e1540cfd923807e5467 134 PANTHER PTHR24423 2 132 7.7E-25 T 22-04-2016 RMET_RS25955 e0a0f52a51ed8e1540cfd923807e5467 134 Gene3D G3DSA:3.30.565.10 73 132 4.2E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS25955 e0a0f52a51ed8e1540cfd923807e5467 134 SUPERFAMILY SSF47384 2 65 5.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS25955 e0a0f52a51ed8e1540cfd923807e5467 134 SUPERFAMILY SSF55874 56 132 7.31E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS25955 e0a0f52a51ed8e1540cfd923807e5467 134 PANTHER PTHR24423:SF474 2 132 7.7E-25 T 22-04-2016 RMET_RS25955 e0a0f52a51ed8e1540cfd923807e5467 134 SMART SM00388 1 66 1.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS25955 e0a0f52a51ed8e1540cfd923807e5467 134 Pfam PF00512 His Kinase A (phospho-acceptor) domain 2 64 3.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS04555 146d853d53ab858515bd4008d7a0e5db 372 Pfam PF13439 Glycosyltransferase Family 4 14 165 6.1E-21 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RMET_RS04555 146d853d53ab858515bd4008d7a0e5db 372 PANTHER PTHR12526:SF363 1 324 5.2E-76 T 22-04-2016 RMET_RS04555 146d853d53ab858515bd4008d7a0e5db 372 SUPERFAMILY SSF53756 1 329 1.62E-63 T 22-04-2016 RMET_RS04555 146d853d53ab858515bd4008d7a0e5db 372 Pfam PF13692 Glycosyl transferases group 1 180 295 2.3E-15 T 22-04-2016 RMET_RS04555 146d853d53ab858515bd4008d7a0e5db 372 PANTHER PTHR12526 1 324 5.2E-76 T 22-04-2016 RMET_RS04555 146d853d53ab858515bd4008d7a0e5db 372 Gene3D G3DSA:3.40.50.2000 170 294 8.0E-15 T 22-04-2016 RMET_RS15950 c4ca882e8bd5f9c46d419ed183e70870 270 SUPERFAMILY SSF51366 4 269 2.12E-84 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RMET_RS15950 c4ca882e8bd5f9c46d419ed183e70870 270 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 263 6.4E-92 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RMET_RS15950 c4ca882e8bd5f9c46d419ed183e70870 270 PANTHER PTHR22854 1 270 1.0E-102 T 22-04-2016 RMET_RS15950 c4ca882e8bd5f9c46d419ed183e70870 270 Gene3D G3DSA:3.20.20.70 5 269 8.3E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS15950 c4ca882e8bd5f9c46d419ed183e70870 270 PANTHER PTHR22854:SF2 1 270 1.0E-102 T 22-04-2016 RMET_RS15950 c4ca882e8bd5f9c46d419ed183e70870 270 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 64 82 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RMET_RS15950 c4ca882e8bd5f9c46d419ed183e70870 270 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 6 270 34.303 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RMET_RS08345 2128b418489f1b2b3fa0b5abfd1f8c14 232 Gene3D G3DSA:3.30.420.10 78 191 6.1E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08345 2128b418489f1b2b3fa0b5abfd1f8c14 232 PANTHER PTHR35528 9 194 1.9E-42 T 22-04-2016 RMET_RS08345 2128b418489f1b2b3fa0b5abfd1f8c14 232 Pfam PF13610 DDE domain 79 212 3.8E-44 T 22-04-2016 IPR032874 DDE domain RMET_RS08345 2128b418489f1b2b3fa0b5abfd1f8c14 232 PANTHER PTHR35528:SF1 9 194 1.9E-42 T 22-04-2016 RMET_RS08345 2128b418489f1b2b3fa0b5abfd1f8c14 232 SUPERFAMILY SSF53098 80 192 1.14E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS07855 6ef0c0395f346e29cfc4931a68145f59 245 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 5 95 4.8E-29 T 22-04-2016 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain RMET_RS07855 6ef0c0395f346e29cfc4931a68145f59 245 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 98 240 2.2E-39 T 22-04-2016 IPR021561 Transcriptional regulator, AbiEi_3 antitoxin, Type IV TA system RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 154 164 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 Gene3D G3DSA:3.30.390.30 462 578 6.1E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 467 575 9.8E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 Gene3D G3DSA:3.50.50.60 118 269 2.2E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 Gene3D G3DSA:2.40.50.100 4 78 7.1E-21 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 SUPERFAMILY SSF51905 117 457 8.03E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 Gene3D G3DSA:3.50.50.60 387 461 2.2E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 SUPERFAMILY SSF55424 463 585 7.56E-38 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 Pfam PF00364 Biotin-requiring enzyme 5 75 2.2E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 120 577 7.9E-142 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 Gene3D G3DSA:3.50.50.60 276 386 2.0E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PANTHER PTHR22912 105 234 1.5E-257 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PANTHER PTHR22912 256 579 1.5E-257 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PANTHER PTHR22912:SF160 105 234 1.5E-257 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PANTHER PTHR22912:SF160 256 579 1.5E-257 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 384 400 3.2E-40 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 276 3.2E-40 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 314 3.2E-40 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 121 140 3.2E-40 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 413 435 3.2E-40 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 SUPERFAMILY SSF51230 2 96 4.83E-23 T 22-04-2016 IPR011053 Single hybrid motif RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 121 448 1.5E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 270 4.8E-68 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 120 142 4.8E-68 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 168 4.8E-68 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 399 4.8E-68 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 528 543 4.8E-68 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 435 4.8E-68 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 321 4.8E-68 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 463 484 4.8E-68 T 22-04-2016 RMET_RS06050 e041ef72e8d7afff43af8dbbd5fbe91b 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 550 570 4.8E-68 T 22-04-2016 RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 Gene3D G3DSA:3.40.50.2300 1 120 6.0E-39 T 22-04-2016 RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 SMART SM00448 1 112 8.1E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 PANTHER PTHR26402 1 220 1.2E-76 T 22-04-2016 RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 SUPERFAMILY SSF52172 1 177 3.7E-40 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 SMART SM00862 143 220 8.6E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 Gene3D G3DSA:1.10.10.10 125 220 3.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 PANTHER PTHR26402:SF316 1 220 1.2E-76 T 22-04-2016 RMET_RS15115 dbc8e83d6dca15ae6c396543c36c8124 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 4.1E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS15500 09fd0ac90bf5621ecf77a810a23ec6e1 212 PANTHER PTHR30086:SF12 16 201 1.6E-67 T 22-04-2016 RMET_RS15500 09fd0ac90bf5621ecf77a810a23ec6e1 212 Pfam PF01810 LysE type translocator 28 199 1.8E-17 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS15500 09fd0ac90bf5621ecf77a810a23ec6e1 212 PANTHER PTHR30086 16 201 1.6E-67 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS03025 5ab1610192c59651645220bd676d37ef 296 Gene3D G3DSA:3.60.21.10 33 280 4.6E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS03025 5ab1610192c59651645220bd676d37ef 296 Pfam PF00149 Calcineurin-like phosphoesterase 38 226 2.9E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RMET_RS03025 5ab1610192c59651645220bd676d37ef 296 PANTHER PTHR22953 29 225 1.1E-12 T 22-04-2016 RMET_RS03025 5ab1610192c59651645220bd676d37ef 296 SUPERFAMILY SSF56300 34 292 4.18E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS17950 abf0fe01f50adf9cc41bbe6499ea4840 64 Pfam PF04328 Protein of unknown function (DUF466) 5 64 2.1E-29 T 22-04-2016 IPR007423 Protein of unknown function DUF466 RMET_RS17950 abf0fe01f50adf9cc41bbe6499ea4840 64 PANTHER PTHR38453 1 64 2.8E-31 T 22-04-2016 RMET_RS17950 abf0fe01f50adf9cc41bbe6499ea4840 64 PANTHER PTHR38453:SF1 1 64 2.8E-31 T 22-04-2016 RMET_RS17110 456598f7027dc9221074d123c6352a15 321 Gene3D G3DSA:1.20.1510.10 30 227 3.1E-48 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RMET_RS17110 456598f7027dc9221074d123c6352a15 321 PANTHER PTHR11562 18 321 9.7E-90 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS17110 456598f7027dc9221074d123c6352a15 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 30 308 5.3E-68 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS17110 456598f7027dc9221074d123c6352a15 321 SUPERFAMILY SSF161111 29 228 5.62E-54 T 22-04-2016 RMET_RS17110 456598f7027dc9221074d123c6352a15 321 PANTHER PTHR11562:SF18 18 321 9.7E-90 T 22-04-2016 RMET_RS17110 456598f7027dc9221074d123c6352a15 321 Pfam PF16916 Dimerisation domain of Zinc Transporter 232 308 9.3E-21 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RMET_RS17110 456598f7027dc9221074d123c6352a15 321 SUPERFAMILY SSF160240 230 309 5.23E-20 T 22-04-2016 RMET_RS17110 456598f7027dc9221074d123c6352a15 321 Pfam PF01545 Cation efflux family 34 227 5.8E-49 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS17110 456598f7027dc9221074d123c6352a15 321 Gene3D G3DSA:3.30.70.1350 228 309 4.8E-24 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 30.646 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 SUPERFAMILY SSF46929 151 192 3.4E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 Pfam PF01330 RuvA N terminal domain 1 62 2.0E-20 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 Gene3D G3DSA:2.40.50.140 1 65 9.9E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 SMART SM00278 108 127 0.0012 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 SMART SM00278 73 92 15.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 Pfam PF07499 RuvA, C-terminal domain 151 191 4.2E-14 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 SUPERFAMILY SSF50249 1 63 5.71E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 Gene3D G3DSA:1.10.8.10 153 190 2.0E-8 T 22-04-2016 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 Pfam PF14520 Helix-hairpin-helix domain 72 129 2.6E-17 T 22-04-2016 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 188 3.5E-53 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 PANTHER PTHR33796 2 193 4.4E-71 T 22-04-2016 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 SUPERFAMILY SSF47781 65 132 4.08E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RMET_RS02140 93d8694acf091c84ad2c1848084bb563 193 Gene3D G3DSA:1.10.150.20 68 134 5.6E-28 T 22-04-2016 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 Gene3D G3DSA:3.30.43.10 3 95 7.9E-23 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 Gene3D G3DSA:3.30.465.10 98 218 7.3E-37 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 PANTHER PTHR11748 1 465 1.4E-176 T 22-04-2016 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 SUPERFAMILY SSF55103 191 466 1.18E-50 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 464 4.4E-48 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 SUPERFAMILY SSF56176 5 218 5.06E-73 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 Gene3D G3DSA:1.10.45.10 425 464 1.6E-15 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 PANTHER PTHR11748:SF76 1 465 1.4E-176 T 22-04-2016 RMET_RS08090 475b97782c932b35c966966b7435ea5a 468 Pfam PF01565 FAD binding domain 42 179 1.4E-39 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 221 236 1.1E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 301 315 1.1E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 329 342 1.1E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 PANTHER PTHR32039 1 510 7.8E-238 T 22-04-2016 RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 PANTHER PTHR32039:SF7 1 510 7.8E-238 T 22-04-2016 IPR004482 Mg chelatase-related protein RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 414 506 1.1E-30 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 SMART SM00382 222 404 1.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 506 8.3E-184 T 22-04-2016 IPR004482 Mg chelatase-related protein RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 Gene3D G3DSA:3.30.230.10 8 176 4.4E-23 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 137 2.7E-43 T 22-04-2016 RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 SUPERFAMILY SSF52540 202 507 8.59E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 SUPERFAMILY SSF54211 10 176 1.06E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 Gene3D G3DSA:3.40.50.300 202 401 5.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01205 97f84d006a4ca64e2bc47a07719a13e1 512 Pfam PF01078 Magnesium chelatase, subunit ChlI 202 407 3.6E-98 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain RMET_RS09625 4bd50890b24d62e2888c6fcb9ac1bd98 208 PANTHER PTHR14119 1 202 2.1E-107 T 22-04-2016 RMET_RS09625 4bd50890b24d62e2888c6fcb9ac1bd98 208 PANTHER PTHR14119:SF1 1 202 2.1E-107 T 22-04-2016 RMET_RS09625 4bd50890b24d62e2888c6fcb9ac1bd98 208 Pfam PF00857 Isochorismatase family 13 163 9.9E-22 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS09625 4bd50890b24d62e2888c6fcb9ac1bd98 208 Gene3D G3DSA:3.40.50.850 5 204 3.0E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS09625 4bd50890b24d62e2888c6fcb9ac1bd98 208 SUPERFAMILY SSF52499 2 204 2.49E-46 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS15710 02d34747d5d81766cc83937844b0b52d 142 PANTHER PTHR34701 2 123 6.7E-40 T 22-04-2016 RMET_RS15710 02d34747d5d81766cc83937844b0b52d 142 SUPERFAMILY SSF89447 2 129 4.93E-38 T 22-04-2016 RMET_RS15710 02d34747d5d81766cc83937844b0b52d 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 121 2.0E-64 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RMET_RS15710 02d34747d5d81766cc83937844b0b52d 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 141 1.2E-34 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RMET_RS15710 02d34747d5d81766cc83937844b0b52d 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 50.071 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RMET_RS15710 02d34747d5d81766cc83937844b0b52d 142 Pfam PF02381 MraZ protein, putative antitoxin-like 1 66 1.4E-12 T 22-04-2016 IPR020603 MraZ domain RMET_RS15710 02d34747d5d81766cc83937844b0b52d 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 127 1.4E-13 T 22-04-2016 IPR020603 MraZ domain RMET_RS03890 351154970650c1b81bf679687af98079 284 PANTHER PTHR24220 6 280 5.0E-104 T 22-04-2016 RMET_RS03890 351154970650c1b81bf679687af98079 284 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 5 250 1.3E-88 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 RMET_RS03890 351154970650c1b81bf679687af98079 284 Gene3D G3DSA:3.40.50.300 4 243 7.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03890 351154970650c1b81bf679687af98079 284 SUPERFAMILY SSF52540 4 243 3.75E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03890 351154970650c1b81bf679687af98079 284 Pfam PF00005 ABC transporter 21 181 4.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03890 351154970650c1b81bf679687af98079 284 PANTHER PTHR24220:SF408 6 280 5.0E-104 T 22-04-2016 RMET_RS03890 351154970650c1b81bf679687af98079 284 SMART SM00382 30 238 1.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS03890 351154970650c1b81bf679687af98079 284 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 Pfam PF00375 Sodium:dicarboxylate symporter family 7 402 3.4E-109 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 1.4E-46 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 1.4E-46 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 1.4E-46 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.4E-46 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 1.4E-46 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.4E-46 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.4E-46 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 1.4E-46 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PANTHER PTHR11958 1 422 2.8E-151 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 SUPERFAMILY SSF118215 5 404 1.16E-110 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 PANTHER PTHR11958:SF26 1 422 2.8E-151 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 RMET_RS02980 d2ea63dab9bbdca3730154f0e057bc1e 435 Gene3D G3DSA:1.10.3860.10 3 405 2.8E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 Pfam PF00884 Sulfatase 4 382 4.3E-51 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 Gene3D G3DSA:3.40.720.10 4 104 7.7E-84 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 Gene3D G3DSA:3.40.720.10 136 241 7.7E-84 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 Gene3D G3DSA:3.40.720.10 278 438 7.7E-84 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 PANTHER PTHR10342:SF233 184 511 6.9E-169 T 22-04-2016 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 PANTHER PTHR10342:SF233 4 162 6.9E-169 T 22-04-2016 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 PANTHER PTHR10342 184 511 6.9E-169 T 22-04-2016 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 PANTHER PTHR10342 4 162 6.9E-169 T 22-04-2016 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 Gene3D G3DSA:3.30.1120.10 439 491 5.1E-11 T 22-04-2016 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 SUPERFAMILY SSF53649 4 103 2.49E-105 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 SUPERFAMILY SSF53649 284 496 2.49E-105 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RMET_RS09025 ebf0595b1ebb2d2bc80afa1c6d3b97c1 518 SUPERFAMILY SSF53649 138 241 2.49E-105 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RMET_RS00075 e1e163be7da9c178a6f52c0f4aba0360 219 PANTHER PTHR12714 8 219 5.2E-26 T 22-04-2016 RMET_RS00075 e1e163be7da9c178a6f52c0f4aba0360 219 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 109 197 9.9E-17 T 22-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PIRSF PIRSF002583 1 633 6.0E-209 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 SUPERFAMILY SSF110942 521 632 2.09E-34 T 22-04-2016 RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 Gene3D G3DSA:3.30.565.10 6 242 1.1E-82 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 SMART SM00387 28 185 1.4E-4 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 SUPERFAMILY SSF54211 235 494 1.06E-94 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 Pfam PF00183 Hsp90 protein 218 632 3.7E-124 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PANTHER PTHR11528:SF44 6 632 0.0 T 22-04-2016 RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 SUPERFAMILY SSF55874 5 217 2.88E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 633 32.328 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PRINTS PR00775 90kDa heat shock protein signature 76 93 5.1E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PRINTS PR00775 90kDa heat shock protein signature 6 26 5.1E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PRINTS PR00775 90kDa heat shock protein signature 173 190 5.1E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PRINTS PR00775 90kDa heat shock protein signature 27 49 5.1E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PRINTS PR00775 90kDa heat shock protein signature 94 111 5.1E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PRINTS PR00775 90kDa heat shock protein signature 191 209 5.1E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PRINTS PR00775 90kDa heat shock protein signature 121 143 5.1E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 PANTHER PTHR11528 6 632 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RMET_RS12565 6c78333e77022777a3b6e719816239d0 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 183 1.5E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 Gene3D G3DSA:1.20.120.530 91 231 6.9E-32 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 Pfam PF07729 FCD domain 97 221 8.0E-27 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 SUPERFAMILY SSF46785 1 77 2.01E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 SMART SM00895 97 223 5.0E-24 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 SMART SM00345 14 73 4.3E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.3E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.3E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.7E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 SUPERFAMILY SSF48008 93 230 6.28E-29 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 Gene3D G3DSA:1.10.10.10 7 76 6.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09180 1c48d8cb8cafed7be46c27b2f8c39078 247 PANTHER PTHR11751 9 113 1.6E-27 T 22-04-2016 RMET_RS09310 e8e37cbe5d9aa3760f0b48338400885a 437 PANTHER PTHR30482 1 362 1.5E-58 T 22-04-2016 RMET_RS09310 e8e37cbe5d9aa3760f0b48338400885a 437 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 323 2.9E-30 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 PANTHER PTHR11649 21 312 3.9E-105 T 22-04-2016 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 45 1.7E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 93 111 1.7E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 Gene3D G3DSA:3.40.50.300 22 207 6.0E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 Gene3D G3DSA:3.30.300.20 208 307 8.0E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 PANTHER PTHR11649:SF3 21 312 3.9E-105 T 22-04-2016 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 SUPERFAMILY SSF52540 24 221 1.57E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 TIGRFAM TIGR00436 era: GTP-binding protein Era 23 294 2.9E-83 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 Pfam PF01926 50S ribosome-binding GTPase 25 138 1.3E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 SUPERFAMILY SSF54814 198 312 1.05E-38 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 Pfam PF07650 KH domain 224 299 1.6E-17 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 Hamap MF_00367 GTPase Era [era]. 20 311 34.164 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RMET_RS12125 faeb11e5e67e2bc572c96b618bc74f2f 312 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 22 184 6.6E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS04895 e6f76421544d143dcfe344f21716f548 259 Gene3D G3DSA:3.90.226.10 5 259 4.1E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS04895 e6f76421544d143dcfe344f21716f548 259 PANTHER PTHR11941 8 258 5.4E-77 T 22-04-2016 RMET_RS04895 e6f76421544d143dcfe344f21716f548 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 258 5.3E-57 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS04895 e6f76421544d143dcfe344f21716f548 259 SUPERFAMILY SSF52096 5 259 2.25E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS04895 e6f76421544d143dcfe344f21716f548 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 37 308 7.9E-123 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 PRINTS PR00046 Major sigma-70 factor signature 277 292 2.3E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 PRINTS PR00046 Major sigma-70 factor signature 100 113 2.3E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 PRINTS PR00046 Major sigma-70 factor signature 124 132 2.3E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 PRINTS PR00046 Major sigma-70 factor signature 292 303 2.3E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 Gene3D G3DSA:1.10.601.10 37 145 4.4E-39 T 22-04-2016 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 Pfam PF04545 Sigma-70, region 4 249 304 2.2E-14 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 Pfam PF04542 Sigma-70 region 2 77 145 2.2E-19 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 22 309 51.266 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 Gene3D G3DSA:1.10.10.10 244 307 5.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 277 303 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 PANTHER PTHR30376 25 307 1.0E-104 T 22-04-2016 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 Pfam PF00140 Sigma-70 factor, region 1.2 39 66 3.4E-6 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 100 113 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 SUPERFAMILY SSF88946 37 145 1.7E-41 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 71 306 6.1E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS01385 2b713df80210a5c999c6968bc21b5e2b 311 SUPERFAMILY SSF88659 211 307 7.66E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 SMART SM00986 74 243 1.4E-36 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 Pfam PF03167 Uracil DNA glycosylase superfamily 77 242 1.2E-21 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 Gene3D G3DSA:3.40.470.10 19 254 7.4E-91 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 82 91 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 PANTHER PTHR11264 34 255 1.4E-112 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 SMART SM00987 74 243 1.4E-36 T 22-04-2016 RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 31 254 38.123 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 33 247 3.5E-75 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RMET_RS15960 12c4977023e2dd1708a6a68e058f4234 256 SUPERFAMILY SSF52141 31 254 1.37E-80 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS12560 11bc7691fdf7b44b92014f0ad2c89022 164 SMART SM00987 8 160 4.6E-9 T 22-04-2016 RMET_RS12560 11bc7691fdf7b44b92014f0ad2c89022 164 Gene3D G3DSA:3.40.470.10 7 164 5.2E-34 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS12560 11bc7691fdf7b44b92014f0ad2c89022 164 SUPERFAMILY SSF52141 6 163 2.81E-37 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS12560 11bc7691fdf7b44b92014f0ad2c89022 164 Pfam PF03167 Uracil DNA glycosylase superfamily 9 160 5.6E-14 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS12560 11bc7691fdf7b44b92014f0ad2c89022 164 SMART SM00986 8 160 4.6E-9 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RMET_RS12560 11bc7691fdf7b44b92014f0ad2c89022 164 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 7 156 3.5E-45 T 22-04-2016 IPR026353 Hypoxanthine-DNA glycosylase RMET_RS07070 51a71eab4494d1803f941d82c1375ad6 161 SUPERFAMILY SSF158442 8 151 7.59E-36 T 22-04-2016 RMET_RS07070 51a71eab4494d1803f941d82c1375ad6 161 Gene3D G3DSA:1.20.1550.10 4 159 5.2E-47 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain RMET_RS07070 51a71eab4494d1803f941d82c1375ad6 161 PANTHER PTHR36570 1 156 1.6E-18 T 22-04-2016 RMET_RS07070 51a71eab4494d1803f941d82c1375ad6 161 Pfam PF02600 Disulfide bond formation protein DsbB 6 151 3.1E-38 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 RMET_RS07070 51a71eab4494d1803f941d82c1375ad6 161 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 159 19.427 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 SMART SM00862 153 229 1.8E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 3.1E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 Gene3D G3DSA:1.10.10.10 131 230 4.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 SUPERFAMILY SSF52172 7 187 1.61E-38 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 Pfam PF00072 Response regulator receiver domain 9 118 3.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 PANTHER PTHR26402:SF399 7 230 1.1E-98 T 22-04-2016 RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 SMART SM00448 7 117 5.9E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 Gene3D G3DSA:3.40.50.2300 7 129 6.3E-36 T 22-04-2016 RMET_RS00225 2beb1307ec290b650421c6a49b1c076f 231 PANTHER PTHR26402 7 230 1.1E-98 T 22-04-2016 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 408 514 3.4E-16 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 380 390 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 SUPERFAMILY SSF51905 26 352 1.65E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 49 2.3E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 100 112 2.3E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 375 387 2.3E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 26 38 2.3E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 55 67 2.3E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 344 350 2.3E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 Gene3D G3DSA:3.50.50.60 25 265 1.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 PANTHER PTHR11985 8 523 1.5E-204 T 22-04-2016 RMET_RS11240 90f0dbbacaedf89ba7537ca30c0eb8ab 534 Pfam PF01266 FAD dependent oxidoreductase 27 386 3.5E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RMET_RS04600 7c6fdea45f03d6fc8fb8f03b8c1d5b15 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 2.8E-73 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS04600 7c6fdea45f03d6fc8fb8f03b8c1d5b15 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 9.5E-134 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS04600 7c6fdea45f03d6fc8fb8f03b8c1d5b15 338 SUPERFAMILY SSF51735 1 182 3.31E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS04600 7c6fdea45f03d6fc8fb8f03b8c1d5b15 338 SUPERFAMILY SSF48179 183 332 7.14E-71 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS04600 7c6fdea45f03d6fc8fb8f03b8c1d5b15 338 Gene3D G3DSA:1.10.1040.10 29 325 5.8E-115 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS04600 7c6fdea45f03d6fc8fb8f03b8c1d5b15 338 PANTHER PTHR21371 1 337 1.0E-184 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS04600 7c6fdea45f03d6fc8fb8f03b8c1d5b15 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.382 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS04600 7c6fdea45f03d6fc8fb8f03b8c1d5b15 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 2.7E-65 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RMET_RS00415 2ad3ded5dd60f51a95fe637f0a349280 275 PANTHER PTHR11941 4 274 2.2E-120 T 22-04-2016 RMET_RS00415 2ad3ded5dd60f51a95fe637f0a349280 275 SUPERFAMILY SSF52096 16 275 2.42E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS00415 2ad3ded5dd60f51a95fe637f0a349280 275 Gene3D G3DSA:3.90.226.10 14 271 6.5E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS00415 2ad3ded5dd60f51a95fe637f0a349280 275 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 119 139 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RMET_RS00415 2ad3ded5dd60f51a95fe637f0a349280 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 45 275 2.9E-38 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS00415 2ad3ded5dd60f51a95fe637f0a349280 275 PANTHER PTHR11941:SF15 4 274 2.2E-120 T 22-04-2016 RMET_RS16135 67ca87530fc91c0af8da4d8496bedb32 455 PANTHER PTHR11206 24 451 7.7E-46 T 22-04-2016 RMET_RS16135 67ca87530fc91c0af8da4d8496bedb32 455 Pfam PF01554 MatE 264 409 5.6E-20 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS16135 67ca87530fc91c0af8da4d8496bedb32 455 Pfam PF01554 MatE 34 183 3.2E-9 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS16135 67ca87530fc91c0af8da4d8496bedb32 455 PANTHER PTHR11206:SF132 24 451 7.7E-46 T 22-04-2016 RMET_RS02915 d178c83c0d935c6b30f0c5e7fafde6a2 173 SUPERFAMILY SSF52309 1 161 9.77E-45 T 22-04-2016 RMET_RS02915 d178c83c0d935c6b30f0c5e7fafde6a2 173 Gene3D G3DSA:3.40.50.1810 1 147 4.4E-26 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 RMET_RS02915 d178c83c0d935c6b30f0c5e7fafde6a2 173 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 142 8.7E-46 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 RMET_RS02915 d178c83c0d935c6b30f0c5e7fafde6a2 173 PANTHER PTHR15364 4 156 2.3E-50 T 22-04-2016 RMET_RS02915 d178c83c0d935c6b30f0c5e7fafde6a2 173 PANTHER PTHR15364:SF1 4 156 2.3E-50 T 22-04-2016 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 PANTHER PTHR23355 609 746 3.4E-242 T 22-04-2016 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 Hamap MF_01895 Ribonuclease R [rnr]. 28 744 57.804 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SMART SM00357 75 134 6.8E-11 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 PANTHER PTHR23355:SF9 609 746 3.4E-242 T 22-04-2016 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 PANTHER PTHR23355:SF9 2 579 3.4E-242 T 22-04-2016 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 Gene3D G3DSA:1.10.10.10 12 67 6.4E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 63 744 5.6E-213 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 Gene3D G3DSA:2.40.50.140 664 746 5.0E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SMART SM00316 70 131 33.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SMART SM00316 661 744 1.3E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 615 9.6E-214 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SMART SM00955 249 581 1.5E-188 T 22-04-2016 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SUPERFAMILY SSF50249 527 582 3.14E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SUPERFAMILY SSF50249 621 661 3.14E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SUPERFAMILY SSF50249 176 491 3.14E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SUPERFAMILY SSF50249 56 136 3.23E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 Pfam PF00575 S1 RNA binding domain 661 741 7.2E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 Pfam PF00773 RNB domain 249 580 2.2E-107 T 22-04-2016 RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 Pfam PF08206 Ribonuclease B OB domain 76 133 4.4E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 SUPERFAMILY SSF50249 663 743 1.01E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site RMET_RS10470 acf5f3b8f9eab522f802d95dffa66ee4 876 PANTHER PTHR23355 2 579 3.4E-242 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 ProSitePatterns PS01047 Heavy-metal-associated domain. 27 56 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 SUPERFAMILY SSF56784 438 456 1.6E-34 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 SUPERFAMILY SSF56784 516 730 1.6E-34 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 Pfam PF00403 Heavy-metal-associated domain 24 84 9.5E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 PANTHER PTHR24093:SF50 11 734 4.8E-116 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 Gene3D G3DSA:3.40.1110.10 457 533 8.2E-6 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 173 734 2.3E-125 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 Gene3D G3DSA:3.30.70.100 23 102 1.1E-12 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 708 2.0E-58 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 PANTHER PTHR24093 11 734 4.8E-116 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 SUPERFAMILY SSF81653 252 327 9.15E-16 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 440 446 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 667 1.2E-17 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 569 1.2E-17 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 452 1.2E-17 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 580 590 1.2E-17 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 288 302 1.2E-17 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 1.2E-17 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 SUPERFAMILY SSF55008 22 91 2.09E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 Gene3D G3DSA:2.70.150.10 200 325 2.8E-19 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 Pfam PF00122 E1-E2 ATPase 206 429 3.1E-56 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 SUPERFAMILY SSF81665 681 707 9.94E-13 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 SUPERFAMILY SSF81665 339 432 9.94E-13 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 SUPERFAMILY SSF81665 203 238 9.94E-13 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 Pfam PF00702 haloacid dehalogenase-like hydrolase 436 645 2.7E-22 T 22-04-2016 RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 Gene3D G3DSA:3.40.50.1000 414 454 1.6E-29 T 22-04-2016 IPR023214 HAD-like domain RMET_RS11935 8ac354ee6a1cdef52ed1558ad38af08d 752 Gene3D G3DSA:3.40.50.1000 553 700 1.6E-29 T 22-04-2016 IPR023214 HAD-like domain RMET_RS13610 d58979d7c83bc479474f08035b8a8138 107 PANTHER PTHR10657 23 107 2.0E-16 T 22-04-2016 RMET_RS13610 d58979d7c83bc479474f08035b8a8138 107 SMART SM00450 7 102 3.7E-17 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13610 d58979d7c83bc479474f08035b8a8138 107 Gene3D G3DSA:3.40.250.10 2 107 3.0E-30 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13610 d58979d7c83bc479474f08035b8a8138 107 Pfam PF00581 Rhodanese-like domain 8 97 9.3E-13 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13610 d58979d7c83bc479474f08035b8a8138 107 PANTHER PTHR10657:SF12 23 107 2.0E-16 T 22-04-2016 RMET_RS13610 d58979d7c83bc479474f08035b8a8138 107 SUPERFAMILY SSF52821 2 105 2.23E-29 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 Gene3D G3DSA:3.20.20.240 544 1089 1.0E-197 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 Gene3D G3DSA:3.40.50.300 211 389 6.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 Pfam PF02310 B12 binding domain 29 131 3.3E-11 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 SUPERFAMILY SSF52242 23 158 1.27E-41 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 PANTHER PTHR23408 479 702 5.6E-212 T 22-04-2016 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 PANTHER PTHR23408 725 1093 5.6E-212 T 22-04-2016 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 Pfam PF01642 Methylmalonyl-CoA mutase 557 1087 3.9E-150 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 Gene3D G3DSA:3.40.50.280 24 156 1.6E-38 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 SUPERFAMILY SSF51703 511 1089 4.45E-153 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 26 139 4.3E-17 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 725 1092 2.0E-92 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 PANTHER PTHR23408:SF1 479 702 5.6E-212 T 22-04-2016 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 PANTHER PTHR23408:SF1 725 1093 5.6E-212 T 22-04-2016 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 Pfam PF03308 ArgK protein 180 384 6.0E-42 T 22-04-2016 RMET_RS01070 94acc2453ad185473cc1f6e57c7bc3ec 1093 SUPERFAMILY SSF52540 167 417 4.25E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16270 ec52fdfd56d18c2341b554d03587b597 217 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 214 5.5E-60 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RMET_RS16270 ec52fdfd56d18c2341b554d03587b597 217 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 215 34.381 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RMET_RS16270 ec52fdfd56d18c2341b554d03587b597 217 PIRSF PIRSF000495 2 217 2.0E-65 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RMET_RS16270 ec52fdfd56d18c2341b554d03587b597 217 Pfam PF00117 Glutamine amidotransferase class-I 6 211 8.0E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RMET_RS16270 ec52fdfd56d18c2341b554d03587b597 217 PANTHER PTHR21235:SF1 4 215 3.0E-76 T 22-04-2016 RMET_RS16270 ec52fdfd56d18c2341b554d03587b597 217 PANTHER PTHR21235 4 215 3.0E-76 T 22-04-2016 RMET_RS16270 ec52fdfd56d18c2341b554d03587b597 217 Gene3D G3DSA:3.40.50.880 1 215 7.0E-77 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS16270 ec52fdfd56d18c2341b554d03587b597 217 SUPERFAMILY SSF52317 2 215 9.78E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 Pfam PF00817 impB/mucB/samB family 11 174 3.1E-40 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 Gene3D G3DSA:1.10.150.20 186 258 1.5E-21 T 22-04-2016 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 SUPERFAMILY SSF100879 263 368 2.35E-26 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 Pfam PF11799 impB/mucB/samB family C-terminal domain 260 369 1.6E-16 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 Hamap MF_01113 DNA polymerase IV [dinB]. 5 381 31.68 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 Pfam PF14520 Helix-hairpin-helix domain 201 234 7.3E-6 T 22-04-2016 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 SUPERFAMILY SSF56672 5 256 2.31E-71 T 22-04-2016 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 Gene3D G3DSA:3.30.70.270 91 184 4.2E-25 T 22-04-2016 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 Gene3D G3DSA:3.30.1490.100 263 370 8.7E-30 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 PANTHER PTHR11076 63 369 3.1E-97 T 22-04-2016 RMET_RS17805 df6fdd8d187331550237242a078c3cd7 393 PANTHER PTHR11076 6 41 3.1E-97 T 22-04-2016 RMET_RS07085 91fd2439c233245c0c8fc2b6b9a11a92 322 SUPERFAMILY SSF56235 4 155 3.16E-95 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS07085 91fd2439c233245c0c8fc2b6b9a11a92 322 SUPERFAMILY SSF56235 187 318 3.16E-95 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS07085 91fd2439c233245c0c8fc2b6b9a11a92 322 PANTHER PTHR10188:SF22 1 321 3.8E-131 T 22-04-2016 RMET_RS07085 91fd2439c233245c0c8fc2b6b9a11a92 322 PANTHER PTHR10188 1 321 3.8E-131 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RMET_RS07085 91fd2439c233245c0c8fc2b6b9a11a92 322 Pfam PF01112 Asparaginase 5 321 3.4E-114 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PANTHER PTHR11958 3 424 1.4E-169 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 Gene3D G3DSA:1.10.3860.10 4 408 1.1E-113 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 Pfam PF00375 Sodium:dicarboxylate symporter family 8 404 5.0E-112 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 5.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PRINTS PR00173 Glutamate-aspartate symporter signature 82 107 5.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 5.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 5.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 5.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 5.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 5.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PRINTS PR00173 Glutamate-aspartate symporter signature 149 171 5.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 SUPERFAMILY SSF118215 8 405 2.09E-112 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RMET_RS05645 b97ac1c9878d17fb931fe7c25c9adfb7 430 PANTHER PTHR11958:SF26 3 424 1.4E-169 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 RMET_RS02065 f45f2b0de573c15a4bb5c50fc489b296 140 Gene3D G3DSA:2.20.25.10 1 35 1.1E-15 T 22-04-2016 RMET_RS02065 f45f2b0de573c15a4bb5c50fc489b296 140 Gene3D G3DSA:3.30.300.20 41 138 1.5E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RMET_RS02065 f45f2b0de573c15a4bb5c50fc489b296 140 SUPERFAMILY SSF82784 1 139 1.7E-40 T 22-04-2016 IPR003718 OsmC/Ohr family RMET_RS02065 f45f2b0de573c15a4bb5c50fc489b296 140 PANTHER PTHR34352 1 140 2.4E-44 T 22-04-2016 RMET_RS02065 f45f2b0de573c15a4bb5c50fc489b296 140 Pfam PF02566 OsmC-like protein 35 133 9.0E-17 T 22-04-2016 IPR003718 OsmC/Ohr family RMET_RS10535 c8e7700ffa7910edd1b3ce57a3829ed7 210 Pfam PF09976 Tetratricopeptide repeat-like domain 15 208 6.5E-65 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain RMET_RS10535 c8e7700ffa7910edd1b3ce57a3829ed7 210 PIRSF PIRSF006170 1 210 2.0E-56 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 RMET_RS10535 c8e7700ffa7910edd1b3ce57a3829ed7 210 Gene3D G3DSA:1.25.40.10 93 188 2.8E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS10535 c8e7700ffa7910edd1b3ce57a3829ed7 210 SUPERFAMILY SSF48452 94 191 1.82E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS10535 c8e7700ffa7910edd1b3ce57a3829ed7 210 PANTHER PTHR38035 2 209 2.4E-34 T 22-04-2016 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 Gene3D G3DSA:2.170.130.10 50 198 2.2E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 88 728 2.4E-89 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 187 8.1E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 Pfam PF00593 TonB dependent receptor 494 726 2.0E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 PANTHER PTHR32552:SF14 78 728 8.4E-58 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 PANTHER PTHR32552:SF14 5 62 8.4E-58 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 PANTHER PTHR32552 78 728 8.4E-58 T 22-04-2016 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 PANTHER PTHR32552 5 62 8.4E-58 T 22-04-2016 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 Gene3D G3DSA:2.40.170.20 201 728 5.4E-96 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS05555 cdf1e9133acdf47454339d9344045d75 728 SUPERFAMILY SSF56935 45 728 1.79E-105 T 22-04-2016 RMET_RS17265 c8061c2e8d3bfa1ebc8be6c9261e9fde 119 Gene3D G3DSA:3.40.30.10 1 118 1.6E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS17265 c8061c2e8d3bfa1ebc8be6c9261e9fde 119 PANTHER PTHR30041 2 119 2.5E-41 T 22-04-2016 RMET_RS17265 c8061c2e8d3bfa1ebc8be6c9261e9fde 119 PANTHER PTHR30041:SF4 2 119 2.5E-41 T 22-04-2016 RMET_RS17265 c8061c2e8d3bfa1ebc8be6c9261e9fde 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 118 1.5E-40 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 RMET_RS17265 c8061c2e8d3bfa1ebc8be6c9261e9fde 119 Pfam PF03960 ArsC family 5 116 8.0E-17 T 22-04-2016 IPR006660 Arsenate reductase-like RMET_RS17265 c8061c2e8d3bfa1ebc8be6c9261e9fde 119 SUPERFAMILY SSF52833 1 118 2.46E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13295 8958851a0cebe529fba79fe0028bed9a 356 PANTHER PTHR30348 57 349 9.4E-20 T 22-04-2016 RMET_RS13295 8958851a0cebe529fba79fe0028bed9a 356 Gene3D G3DSA:3.20.20.410 48 350 1.3E-62 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS13295 8958851a0cebe529fba79fe0028bed9a 356 Pfam PF01904 Protein of unknown function DUF72 80 348 3.4E-40 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS13295 8958851a0cebe529fba79fe0028bed9a 356 SUPERFAMILY SSF117396 55 350 7.59E-50 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS05080 aa46372da03725f626446fdded5d4f83 241 Pfam PF05019 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 26 226 2.7E-19 T 22-04-2016 IPR007715 Ubiquinone biosynthesis protein Coq4 GO:0006744 UniPathway: UPA00232 RMET_RS09495 81405b2266712f65f99e0748350f1320 514 Gene3D G3DSA:3.40.50.970 333 513 1.0E-40 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09495 81405b2266712f65f99e0748350f1320 514 PANTHER PTHR18968 1 514 1.7E-176 T 22-04-2016 RMET_RS09495 81405b2266712f65f99e0748350f1320 514 PANTHER PTHR18968:SF86 1 514 1.7E-176 T 22-04-2016 RMET_RS09495 81405b2266712f65f99e0748350f1320 514 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 9.3E-37 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RMET_RS09495 81405b2266712f65f99e0748350f1320 514 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 365 512 3.3E-23 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RMET_RS09495 81405b2266712f65f99e0748350f1320 514 SUPERFAMILY SSF52518 337 514 3.3E-36 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09495 81405b2266712f65f99e0748350f1320 514 Gene3D G3DSA:3.40.50.970 1 174 4.9E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS09495 81405b2266712f65f99e0748350f1320 514 SUPERFAMILY SSF52518 1 178 1.42E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 PANTHER PTHR30308 2 150 7.3E-74 T 22-04-2016 RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 PANTHER PTHR30308:SF2 2 150 7.3E-74 T 22-04-2016 RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 Gene3D G3DSA:2.40.280.10 2 122 9.8E-50 T 22-04-2016 IPR023620 Small protein B RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 Pfam PF01668 SmpB protein 2 65 4.0E-29 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 SUPERFAMILY SSF74982 2 127 2.49E-50 T 22-04-2016 IPR023620 Small protein B RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 73.471 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 2.0E-68 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 145 1.0E-53 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RMET_RS07335 6c0c6dd1eff83eb443618f29666cb515 150 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site RMET_RS17655 2095c03f9e04c513c4cc804321a626f6 252 PANTHER PTHR30269:SF0 1 248 1.5E-73 T 22-04-2016 RMET_RS17655 2095c03f9e04c513c4cc804321a626f6 252 PANTHER PTHR30269 1 248 1.5E-73 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RMET_RS17655 2095c03f9e04c513c4cc804321a626f6 252 Pfam PF01925 Sulfite exporter TauE/SafE 6 244 3.6E-41 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RMET_RS10675 4b303a03564d50dd1d071324d18eb89e 976 Pfam PF12705 PD-(D/E)XK nuclease superfamily 701 962 1.0E-32 T 22-04-2016 RMET_RS10675 4b303a03564d50dd1d071324d18eb89e 976 Gene3D G3DSA:3.40.50.300 298 378 1.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10675 4b303a03564d50dd1d071324d18eb89e 976 Gene3D G3DSA:3.40.50.300 565 600 1.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS10675 4b303a03564d50dd1d071324d18eb89e 976 SUPERFAMILY SSF52540 304 672 3.19E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 SUPERFAMILY SSF46785 2 93 1.71E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 Gene3D G3DSA:1.10.10.10 1 96 4.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 PANTHER PTHR33154:SF5 1 101 3.5E-23 T 22-04-2016 RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 SMART SM00418 8 88 7.7E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 PANTHER PTHR33154 1 101 3.5E-23 T 22-04-2016 RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.9E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.9E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.9E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RMET_RS01690 d2cdb2b307d5eb6949d14d8539e95589 109 Pfam PF12840 Helix-turn-helix domain 8 69 9.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00835 e4ca8d8a8472e93496631ffc67816fd8 65 Gene3D G3DSA:3.10.20.30 1 65 1.1E-19 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS00835 e4ca8d8a8472e93496631ffc67816fd8 65 PANTHER PTHR34472:SF1 1 65 6.6E-14 T 22-04-2016 RMET_RS00835 e4ca8d8a8472e93496631ffc67816fd8 65 Pfam PF02597 ThiS family 4 65 1.7E-12 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RMET_RS00835 e4ca8d8a8472e93496631ffc67816fd8 65 SUPERFAMILY SSF54285 1 65 2.47E-13 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RMET_RS00835 e4ca8d8a8472e93496631ffc67816fd8 65 PANTHER PTHR34472 1 65 6.6E-14 T 22-04-2016 RMET_RS00835 e4ca8d8a8472e93496631ffc67816fd8 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 9.0E-15 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis RMET_RS12215 0241fc4324ced7ae6898090b3eea45a1 243 Gene3D G3DSA:3.30.950.10 128 241 2.8E-22 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RMET_RS12215 0241fc4324ced7ae6898090b3eea45a1 243 PANTHER PTHR21091 63 185 9.1E-22 T 22-04-2016 RMET_RS12215 0241fc4324ced7ae6898090b3eea45a1 243 PIRSF PIRSF005917 1 239 1.4E-47 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RMET_RS12215 0241fc4324ced7ae6898090b3eea45a1 243 PANTHER PTHR21091:SF118 63 185 9.1E-22 T 22-04-2016 RMET_RS12215 0241fc4324ced7ae6898090b3eea45a1 243 SUPERFAMILY SSF53790 3 238 5.63E-57 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 Gene3D G3DSA:3.50.50.60 588 650 2.1E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 Gene3D G3DSA:3.50.50.60 387 470 2.1E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 Gene3D G3DSA:3.50.50.60 254 326 2.1E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 PANTHER PTHR13847 216 581 1.6E-40 T 22-04-2016 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 PANTHER PTHR13847 597 656 1.6E-40 T 22-04-2016 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 Pfam PF01266 FAD dependent oxidoreductase 255 626 1.7E-40 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 Gene3D G3DSA:3.40.50.150 14 243 3.7E-96 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 255 656 1.4E-118 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 233 2.6E-39 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 SUPERFAMILY SSF51905 255 471 5.57E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 SUPERFAMILY SSF51905 590 656 5.57E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 PANTHER PTHR13847:SF206 216 581 1.6E-40 T 22-04-2016 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 PANTHER PTHR13847:SF206 597 656 1.6E-40 T 22-04-2016 RMET_RS09460 f909eaf88ae6e46ba1e2795e167198d1 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 651 24.731 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 RMET_RS06400 f1fc156b29a337546b8008e6aef01483 389 PANTHER PTHR30294 19 376 3.3E-104 T 22-04-2016 RMET_RS06400 f1fc156b29a337546b8008e6aef01483 389 Pfam PF12698 ABC-2 family transporter protein 42 380 1.3E-44 T 22-04-2016 RMET_RS06400 f1fc156b29a337546b8008e6aef01483 389 PANTHER PTHR30294:SF17 19 376 3.3E-104 T 22-04-2016 RMET_RS16475 7f79dcb49cd4772da11920f9c0cb9aca 227 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 207 25.964 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RMET_RS16475 7f79dcb49cd4772da11920f9c0cb9aca 227 PANTHER PTHR11649 17 207 2.0E-38 T 22-04-2016 RMET_RS16475 7f79dcb49cd4772da11920f9c0cb9aca 227 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 203 5.8E-62 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RMET_RS16475 7f79dcb49cd4772da11920f9c0cb9aca 227 SUPERFAMILY SSF52540 14 204 1.64E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16475 7f79dcb49cd4772da11920f9c0cb9aca 227 Pfam PF01926 50S ribosome-binding GTPase 26 150 8.7E-17 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS16475 7f79dcb49cd4772da11920f9c0cb9aca 227 Gene3D G3DSA:3.40.50.300 16 203 4.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 34 153 1.4E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 PANTHER PTHR10632:SF10 1 379 6.5E-105 T 22-04-2016 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 SUPERFAMILY SSF51905 276 353 1.17E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 SUPERFAMILY SSF51905 34 140 1.17E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 SUPERFAMILY SSF55424 357 425 2.22E-21 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 SUPERFAMILY SSF51905 147 281 1.61E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 Gene3D G3DSA:3.50.50.60 155 281 2.2E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 PANTHER PTHR10632 1 379 6.5E-105 T 22-04-2016 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 Gene3D G3DSA:3.90.760.10 358 425 3.9E-25 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 358 424 4.0E-22 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 Gene3D G3DSA:3.50.50.60 33 148 9.8E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17215 9480d8b5dc65dba7876cff307d9e2a8c 426 Gene3D G3DSA:3.50.50.60 282 354 9.8E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16925 f09e1ec91991a7f62ca0a9bda28f60dc 335 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 29 317 2.5E-162 T 22-04-2016 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149+1.14.13.14|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176|UniPathway: UPA00930 RMET_RS16925 f09e1ec91991a7f62ca0a9bda28f60dc 335 SUPERFAMILY SSF47240 49 292 6.49E-83 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS16925 f09e1ec91991a7f62ca0a9bda28f60dc 335 PANTHER PTHR30458 24 335 3.5E-168 T 22-04-2016 RMET_RS16925 f09e1ec91991a7f62ca0a9bda28f60dc 335 PANTHER PTHR30458:SF0 24 335 3.5E-168 T 22-04-2016 RMET_RS16925 f09e1ec91991a7f62ca0a9bda28f60dc 335 Pfam PF05138 Phenylacetic acid catabolic protein 39 313 2.3E-101 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 RMET_RS16925 f09e1ec91991a7f62ca0a9bda28f60dc 335 Gene3D G3DSA:1.20.1260.10 39 293 7.4E-102 T 22-04-2016 IPR012347 Ferritin-related RMET_RS18265 b1b70fade241c8d446855760012fbcb2 83 Gene3D G3DSA:3.90.850.10 2 82 1.0E-30 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS18265 b1b70fade241c8d446855760012fbcb2 83 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 2 82 1.2E-24 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS18265 b1b70fade241c8d446855760012fbcb2 83 SUPERFAMILY SSF56529 2 82 2.49E-31 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS18265 b1b70fade241c8d446855760012fbcb2 83 PANTHER PTHR11820:SF71 2 83 1.8E-47 T 22-04-2016 RMET_RS18265 b1b70fade241c8d446855760012fbcb2 83 PANTHER PTHR11820 2 83 1.8E-47 T 22-04-2016 RMET_RS04610 7b09f62dae1415054cefc23aef8c3e0d 297 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 94 116 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RMET_RS04610 7b09f62dae1415054cefc23aef8c3e0d 297 Pfam PF01066 CDP-alcohol phosphatidyltransferase 53 116 5.8E-13 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RMET_RS04610 7b09f62dae1415054cefc23aef8c3e0d 297 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 60 196 1.8E-33 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 RMET_RS04610 7b09f62dae1415054cefc23aef8c3e0d 297 PANTHER PTHR15362 44 186 8.0E-33 T 22-04-2016 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 SUPERFAMILY SSF53623 98 311 4.58E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 456 58.985 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 Pfam PF08245 Mur ligase middle domain 108 294 7.0E-24 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 378 9.3E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 SUPERFAMILY SSF53244 314 455 8.77E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 PANTHER PTHR23135 1 455 1.3E-245 T 22-04-2016 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 455 2.3E-214 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 SUPERFAMILY SSF51984 1 90 9.94E-22 T 22-04-2016 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 PANTHER PTHR23135:SF17 1 455 1.3E-245 T 22-04-2016 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 Gene3D G3DSA:3.90.190.20 316 455 5.0E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 Gene3D G3DSA:3.40.1190.10 92 315 1.3E-89 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 Pfam PF01225 Mur ligase family, catalytic domain 2 99 7.9E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS15335 d58374183a23cc1eb04298fe479f1ece 459 Gene3D G3DSA:3.40.50.720 1 90 1.7E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13965 48e30813b59b1fe250414488c824d92a 300 SUPERFAMILY SSF53807 20 289 1.14E-67 T 22-04-2016 RMET_RS13965 48e30813b59b1fe250414488c824d92a 300 PANTHER PTHR30535 1 291 8.3E-57 T 22-04-2016 RMET_RS13965 48e30813b59b1fe250414488c824d92a 300 Gene3D G3DSA:3.40.50.1980 40 157 1.4E-32 T 22-04-2016 RMET_RS13965 48e30813b59b1fe250414488c824d92a 300 Gene3D G3DSA:3.40.50.1980 160 291 3.5E-34 T 22-04-2016 RMET_RS13965 48e30813b59b1fe250414488c824d92a 300 Pfam PF01497 Periplasmic binding protein 43 270 1.5E-28 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 160 9.5E-27 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 Pfam PF04542 Sigma-70 region 2 14 73 3.4E-12 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 SUPERFAMILY SSF88659 84 161 6.17E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 Gene3D G3DSA:1.10.1740.10 14 97 2.5E-12 T 22-04-2016 RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 PANTHER PTHR30173:SF30 14 162 2.1E-32 T 22-04-2016 RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 Gene3D G3DSA:1.10.10.10 106 162 4.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 Pfam PF08281 Sigma-70, region 4 106 156 1.6E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 PANTHER PTHR30173 14 162 2.1E-32 T 22-04-2016 RMET_RS05635 0b1de1a6729ec65c14aee022f192b684 166 SUPERFAMILY SSF88946 11 93 1.96E-14 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS07960 09cfad1ba3a483dd223e6173f56199a1 146 PANTHER PTHR12418 24 139 1.6E-15 T 22-04-2016 RMET_RS07960 09cfad1ba3a483dd223e6173f56199a1 146 Pfam PF03061 Thioesterase superfamily 57 132 8.4E-12 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS07960 09cfad1ba3a483dd223e6173f56199a1 146 SUPERFAMILY SSF54637 13 139 5.97E-24 T 22-04-2016 IPR029069 HotDog domain RMET_RS07960 09cfad1ba3a483dd223e6173f56199a1 146 Gene3D G3DSA:3.10.129.10 14 140 1.2E-26 T 22-04-2016 IPR029069 HotDog domain RMET_RS07960 09cfad1ba3a483dd223e6173f56199a1 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 130 9.4E-16 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RMET_RS20730 579f757687fdc8b0ad10d5bdbcc6533d 339 Gene3D G3DSA:1.20.1250.20 193 337 2.9E-12 T 22-04-2016 RMET_RS20730 579f757687fdc8b0ad10d5bdbcc6533d 339 PANTHER PTHR11662 2 339 5.8E-72 T 22-04-2016 RMET_RS20730 579f757687fdc8b0ad10d5bdbcc6533d 339 PANTHER PTHR11662:SF277 2 339 5.8E-72 T 22-04-2016 RMET_RS20730 579f757687fdc8b0ad10d5bdbcc6533d 339 SUPERFAMILY SSF103473 4 338 3.79E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS20730 579f757687fdc8b0ad10d5bdbcc6533d 339 Gene3D G3DSA:1.20.1250.20 4 172 6.6E-28 T 22-04-2016 RMET_RS20730 579f757687fdc8b0ad10d5bdbcc6533d 339 Pfam PF07690 Major Facilitator Superfamily 5 332 4.5E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS11625 31b85be40afb98518ce0af6da7c22bd6 213 Pfam PF01526 Tn3 transposase DDE domain 42 191 6.2E-63 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RMET_RS12160 0a4ba3d9b3e3e697e6de70a08fa2c390 218 SUPERFAMILY SSF89069 15 82 3.27E-15 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RMET_RS12160 0a4ba3d9b3e3e697e6de70a08fa2c390 218 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 12 92 2.4E-16 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RMET_RS10125 6e5a2070bb539f1b5ef9dbbab5bb72cc 303 PANTHER PTHR21624 18 278 5.7E-79 T 22-04-2016 RMET_RS10125 6e5a2070bb539f1b5ef9dbbab5bb72cc 303 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 7.8E-32 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RMET_RS17890 620f9da03b4d0bab12716a2e63977324 276 Pfam PF14334 Domain of unknown function (DUF4390) 52 207 9.6E-59 T 22-04-2016 IPR025500 Protein of unknown function DUF4390 RMET_RS13015 fd5ebfa0f68cb94bd91721b291af5621 333 PANTHER PTHR30004:SF6 2 332 6.7E-146 T 22-04-2016 RMET_RS13015 fd5ebfa0f68cb94bd91721b291af5621 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 328 5.7E-113 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RMET_RS13015 fd5ebfa0f68cb94bd91721b291af5621 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 323 9.9E-108 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RMET_RS13015 fd5ebfa0f68cb94bd91721b291af5621 333 Gene3D G3DSA:3.40.718.10 5 329 1.4E-131 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RMET_RS13015 fd5ebfa0f68cb94bd91721b291af5621 333 SUPERFAMILY SSF53659 6 332 5.61E-110 T 22-04-2016 RMET_RS13015 fd5ebfa0f68cb94bd91721b291af5621 333 PANTHER PTHR30004 2 332 6.7E-146 T 22-04-2016 RMET_RS13015 fd5ebfa0f68cb94bd91721b291af5621 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 329 35.668 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RMET_RS03915 06c3cf0690f6c5b4db6eca9b90a31896 159 SUPERFAMILY SSF75217 1 157 1.87E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RMET_RS03915 06c3cf0690f6c5b4db6eca9b90a31896 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 157 3.3E-49 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS03915 06c3cf0690f6c5b4db6eca9b90a31896 159 PIRSF PIRSF004505 1 158 2.9E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS03915 06c3cf0690f6c5b4db6eca9b90a31896 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 158 5.1E-49 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS03915 06c3cf0690f6c5b4db6eca9b90a31896 159 PANTHER PTHR33603:SF1 1 158 3.6E-55 T 22-04-2016 RMET_RS03915 06c3cf0690f6c5b4db6eca9b90a31896 159 Gene3D G3DSA:3.40.1280.10 1 158 3.3E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMET_RS03915 06c3cf0690f6c5b4db6eca9b90a31896 159 PANTHER PTHR33603 1 158 3.6E-55 T 22-04-2016 RMET_RS03915 06c3cf0690f6c5b4db6eca9b90a31896 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 158 28.591 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 Gene3D G3DSA:2.20.200.10 115 158 2.2E-23 T 22-04-2016 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 Gene3D G3DSA:2.20.200.10 332 367 2.2E-23 T 22-04-2016 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 Gene3D G3DSA:1.20.1600.10 369 482 4.8E-89 T 22-04-2016 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 Gene3D G3DSA:1.20.1600.10 65 105 4.8E-89 T 22-04-2016 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 Gene3D G3DSA:1.20.1600.10 159 331 4.8E-89 T 22-04-2016 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 Pfam PF02321 Outer membrane efflux protein 305 480 8.7E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 Pfam PF02321 Outer membrane efflux protein 82 271 3.2E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 26 482 4.8E-153 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 SUPERFAMILY SSF56954 21 483 1.96E-100 T 22-04-2016 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 PANTHER PTHR30203 3 501 2.2E-132 T 22-04-2016 RMET_RS10140 67999f2050acbe842e0c72a47bdd35d8 504 PANTHER PTHR30203:SF6 3 501 2.2E-132 T 22-04-2016 RMET_RS13090 245ad5492ba89fec554a80c04c35ece4 342 PANTHER PTHR32332 13 326 1.5E-81 T 22-04-2016 RMET_RS13090 245ad5492ba89fec554a80c04c35ece4 342 Pfam PF03060 Nitronate monooxygenase 16 324 3.2E-41 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RMET_RS13090 245ad5492ba89fec554a80c04c35ece4 342 SUPERFAMILY SSF51412 15 272 3.97E-44 T 22-04-2016 RMET_RS13090 245ad5492ba89fec554a80c04c35ece4 342 Gene3D G3DSA:3.20.20.70 10 319 3.1E-50 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS13090 245ad5492ba89fec554a80c04c35ece4 342 PANTHER PTHR32332:SF22 13 326 1.5E-81 T 22-04-2016 RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 Pfam PF12804 MobA-like NTP transferase domain 307 424 7.7E-16 T 22-04-2016 IPR025877 MobA-like NTP transferase RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 Pfam PF13714 Phosphoenolpyruvate phosphomutase 17 262 5.9E-69 T 22-04-2016 RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 SUPERFAMILY SSF51621 7 350 3.59E-85 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 Gene3D G3DSA:3.90.550.10 306 550 1.1E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 SUPERFAMILY SSF53448 306 544 1.91E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 Gene3D G3DSA:3.20.20.60 11 283 7.7E-78 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 PANTHER PTHR21631:SF23 12 422 5.7E-126 T 22-04-2016 RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 PANTHER PTHR21631 12 422 5.7E-126 T 22-04-2016 RMET_RS09050 f25d49bc63829d4115615b93fdf9bda8 564 TIGRFAM TIGR02320 PEP_mutase: phosphoenolpyruvate mutase 17 288 1.3E-122 T 22-04-2016 IPR012698 Phosphoenolpyruvate phosphomutase, core GO:0050188 KEGG: 00440+5.4.2.9|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7419|MetaCyc: PWY-7510 RMET_RS04795 0281d9dd7825299e4fc791805d3f5e6b 540 PANTHER PTHR11795 93 539 1.6E-153 T 22-04-2016 RMET_RS04795 0281d9dd7825299e4fc791805d3f5e6b 540 Pfam PF02653 Branched-chain amino acid transport system / permease component 246 522 1.6E-51 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS04795 0281d9dd7825299e4fc791805d3f5e6b 540 PANTHER PTHR11795:SF349 93 539 1.6E-153 T 22-04-2016 RMET_RS04795 0281d9dd7825299e4fc791805d3f5e6b 540 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 245 536 3.9E-127 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type RMET_RS01510 66a6950edbc42c3b34b53e8db23c7a3e 217 SUPERFAMILY SSF88697 18 212 5.72E-51 T 22-04-2016 IPR015947 PUA-like domain RMET_RS01510 66a6950edbc42c3b34b53e8db23c7a3e 217 PANTHER PTHR23327 12 149 9.3E-25 T 22-04-2016 RMET_RS01510 66a6950edbc42c3b34b53e8db23c7a3e 217 SMART SM00464 17 213 4.3E-14 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RMET_RS01510 66a6950edbc42c3b34b53e8db23c7a3e 217 PANTHER PTHR23327:SF0 12 149 9.3E-25 T 22-04-2016 RMET_RS01510 66a6950edbc42c3b34b53e8db23c7a3e 217 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 212 1.3E-21 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RMET_RS17105 77020022f48d4f870b413e5c96abfb4c 209 Pfam PF01810 LysE type translocator 16 201 9.1E-35 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS17105 77020022f48d4f870b413e5c96abfb4c 209 PANTHER PTHR30086:SF4 1 209 1.0E-48 T 22-04-2016 RMET_RS17105 77020022f48d4f870b413e5c96abfb4c 209 PANTHER PTHR30086 1 209 1.0E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS17105 77020022f48d4f870b413e5c96abfb4c 209 PIRSF PIRSF006324 1 205 1.8E-44 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS11385 e08754e0349e683a01e387644b2db33c 498 PANTHER PTHR30288:SF0 14 151 5.3E-76 T 22-04-2016 RMET_RS11385 e08754e0349e683a01e387644b2db33c 498 PANTHER PTHR30288:SF0 169 497 5.3E-76 T 22-04-2016 RMET_RS11385 e08754e0349e683a01e387644b2db33c 498 PANTHER PTHR30288 14 151 5.3E-76 T 22-04-2016 RMET_RS11385 e08754e0349e683a01e387644b2db33c 498 PANTHER PTHR30288 169 497 5.3E-76 T 22-04-2016 RMET_RS11385 e08754e0349e683a01e387644b2db33c 498 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 262 482 6.3E-50 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 RMET_RS11385 e08754e0349e683a01e387644b2db33c 498 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 23 119 2.2E-24 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 RMET_RS09215 a114d544237bb329f6261f33bc153d64 145 Gene3D G3DSA:3.10.129.10 2 138 9.2E-46 T 22-04-2016 IPR029069 HotDog domain RMET_RS09215 a114d544237bb329f6261f33bc153d64 145 SUPERFAMILY SSF54637 3 138 4.87E-42 T 22-04-2016 IPR029069 HotDog domain RMET_RS09215 a114d544237bb329f6261f33bc153d64 145 PIRSF PIRSF003230 2 141 7.6E-27 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RMET_RS09215 a114d544237bb329f6261f33bc153d64 145 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 4.9E-40 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RMET_RS09215 a114d544237bb329f6261f33bc153d64 145 Pfam PF03061 Thioesterase superfamily 23 108 6.1E-18 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS09215 a114d544237bb329f6261f33bc153d64 145 PANTHER PTHR31793:SF9 9 139 1.8E-32 T 22-04-2016 RMET_RS09215 a114d544237bb329f6261f33bc153d64 145 PANTHER PTHR31793 9 139 1.8E-32 T 22-04-2016 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 SUPERFAMILY SSF53790 5 244 9.03E-63 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 217 5.6E-46 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 Gene3D G3DSA:3.40.1010.10 9 124 1.5E-41 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 Gene3D G3DSA:3.30.950.10 125 246 2.3E-29 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 10 240 1.1E-85 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 PANTHER PTHR21091:SF16 1 218 7.8E-59 T 22-04-2016 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 15 29 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 PANTHER PTHR21091 1 218 7.8E-59 T 22-04-2016 RMET_RS14105 d867aa4eb599de1442ffaeea678e301c 254 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 89 122 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RMET_RS07205 5b2d6b7abdd6d70966ef179bdfb0a00f 480 PANTHER PTHR23501:SF26 13 465 1.9E-177 T 22-04-2016 RMET_RS07205 5b2d6b7abdd6d70966ef179bdfb0a00f 480 Pfam PF07690 Major Facilitator Superfamily 20 419 3.8E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS07205 5b2d6b7abdd6d70966ef179bdfb0a00f 480 SUPERFAMILY SSF103473 210 453 4.97E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS07205 5b2d6b7abdd6d70966ef179bdfb0a00f 480 Gene3D G3DSA:1.20.1250.20 14 198 8.6E-27 T 22-04-2016 RMET_RS07205 5b2d6b7abdd6d70966ef179bdfb0a00f 480 SUPERFAMILY SSF103473 11 197 2.35E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS07205 5b2d6b7abdd6d70966ef179bdfb0a00f 480 PANTHER PTHR23501 13 465 1.9E-177 T 22-04-2016 RMET_RS07205 5b2d6b7abdd6d70966ef179bdfb0a00f 480 Gene3D G3DSA:1.20.1250.20 265 430 1.8E-12 T 22-04-2016 RMET_RS03910 6bff47a239edad6f883052e1f7801c7f 200 SUPERFAMILY SSF52972 3 195 5.69E-55 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RMET_RS03910 6bff47a239edad6f883052e1f7801c7f 200 PIRSF PIRSF006305 2 199 1.9E-45 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RMET_RS03910 6bff47a239edad6f883052e1f7801c7f 200 Hamap MF_00528 Septum formation protein Maf [maf]. 4 200 30.437 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RMET_RS03910 6bff47a239edad6f883052e1f7801c7f 200 Pfam PF02545 Maf-like protein 5 195 3.2E-50 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RMET_RS03910 6bff47a239edad6f883052e1f7801c7f 200 Gene3D G3DSA:3.90.950.10 5 198 9.2E-63 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RMET_RS03910 6bff47a239edad6f883052e1f7801c7f 200 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 194 8.6E-46 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RMET_RS07080 76b2432eadc0773cbc90c6e650158e07 300 PANTHER PTHR30514:SF3 7 278 4.4E-38 T 22-04-2016 RMET_RS07080 76b2432eadc0773cbc90c6e650158e07 300 Gene3D G3DSA:1.10.10.10 7 79 5.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07080 76b2432eadc0773cbc90c6e650158e07 300 SUPERFAMILY SSF46689 8 78 1.13E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS07080 76b2432eadc0773cbc90c6e650158e07 300 Gene3D G3DSA:3.40.50.10490 112 269 1.9E-24 T 22-04-2016 RMET_RS07080 76b2432eadc0773cbc90c6e650158e07 300 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 75 6.2E-14 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RMET_RS07080 76b2432eadc0773cbc90c6e650158e07 300 SUPERFAMILY SSF53697 108 261 1.91E-25 T 22-04-2016 RMET_RS07080 76b2432eadc0773cbc90c6e650158e07 300 PANTHER PTHR30514 7 278 4.4E-38 T 22-04-2016 RMET_RS07080 76b2432eadc0773cbc90c6e650158e07 300 Pfam PF01380 SIS domain 132 257 3.2E-18 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RMET_RS03375 c996337943b23ae0e145559e91b64f10 150 SUPERFAMILY SSF52172 21 138 9.96E-36 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS03375 c996337943b23ae0e145559e91b64f10 150 SMART SM00448 20 133 7.4E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS03375 c996337943b23ae0e145559e91b64f10 150 Gene3D G3DSA:3.40.50.2300 20 139 8.8E-35 T 22-04-2016 RMET_RS03375 c996337943b23ae0e145559e91b64f10 150 PANTHER PTHR26402:SF568 20 135 1.9E-54 T 22-04-2016 RMET_RS03375 c996337943b23ae0e145559e91b64f10 150 PANTHER PTHR26402 20 135 1.9E-54 T 22-04-2016 RMET_RS03375 c996337943b23ae0e145559e91b64f10 150 Pfam PF00072 Response regulator receiver domain 22 134 1.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 PANTHER PTHR30302:SF1 16 183 1.5E-65 T 22-04-2016 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 21 172 1.7E-66 T 22-04-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 PANTHER PTHR30302 16 183 1.5E-65 T 22-04-2016 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 SUPERFAMILY SSF53163 20 177 1.02E-46 T 22-04-2016 IPR023430 Peptidase HybD-like domain RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 22 164 1.0E-46 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 PRINTS PR00446 Hydrogen uptake protein signature 53 70 1.1E-36 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 PRINTS PR00446 Hydrogen uptake protein signature 21 33 1.1E-36 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 PRINTS PR00446 Hydrogen uptake protein signature 33 44 1.1E-36 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 PRINTS PR00446 Hydrogen uptake protein signature 74 84 1.1E-36 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 PRINTS PR00446 Hydrogen uptake protein signature 85 101 1.1E-36 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 Gene3D G3DSA:3.40.50.1450 20 175 2.8E-50 T 22-04-2016 IPR023430 Peptidase HybD-like domain RMET_RS06515 1b5c4f252a91c4b753a07f8a85b31e3d 221 Pfam PF01750 Hydrogenase maturation protease 38 163 5.1E-44 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RMET_RS02750 d60726f042c5ff10e42b45caf5d0aeb8 222 SUPERFAMILY SSF46689 15 94 1.95E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS02750 d60726f042c5ff10e42b45caf5d0aeb8 222 Gene3D G3DSA:1.10.357.10 15 215 1.1E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS11770 47ccab938473decb39b81b7260b63618 127 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 17 110 1.5E-35 T 22-04-2016 IPR019110 Uncharacterised protein family, RAQPRD RMET_RS11770 47ccab938473decb39b81b7260b63618 127 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 35 109 4.8E-28 T 22-04-2016 IPR019110 Uncharacterised protein family, RAQPRD RMET_RS00745 4a0806329e47a4322ed17fdefd4e2e4f 426 Gene3D G3DSA:1.20.1250.20 11 205 7.0E-15 T 22-04-2016 RMET_RS00745 4a0806329e47a4322ed17fdefd4e2e4f 426 Gene3D G3DSA:1.20.1250.20 226 413 4.1E-16 T 22-04-2016 RMET_RS00745 4a0806329e47a4322ed17fdefd4e2e4f 426 SUPERFAMILY SSF103473 11 411 6.8E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS00745 4a0806329e47a4322ed17fdefd4e2e4f 426 PANTHER PTHR12778 13 401 1.4E-110 T 22-04-2016 RMET_RS00745 4a0806329e47a4322ed17fdefd4e2e4f 426 Pfam PF07690 Major Facilitator Superfamily 22 367 7.8E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS15325 ee69ec1713b4f5eedf0cad59c05716cb 214 PANTHER PTHR38683 19 188 1.5E-24 T 22-04-2016 RMET_RS15325 ee69ec1713b4f5eedf0cad59c05716cb 214 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 6 182 25.304 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RMET_RS15325 ee69ec1713b4f5eedf0cad59c05716cb 214 Gene3D G3DSA:3.40.1410.10 5 180 1.5E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RMET_RS15325 ee69ec1713b4f5eedf0cad59c05716cb 214 SUPERFAMILY SSF64288 6 179 6.59E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RMET_RS15325 ee69ec1713b4f5eedf0cad59c05716cb 214 Pfam PF04345 Chorismate lyase 17 183 4.2E-23 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RMET_RS05375 d8e0db1ed077265f4f665f49cd1af791 413 Pfam PF06804 NlpB/DapX lipoprotein 50 409 5.5E-53 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein RMET_RS00590 55c56339ef7d5165043233029e799e43 406 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 394 2.2E-133 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RMET_RS00590 55c56339ef7d5165043233029e799e43 406 Gene3D G3DSA:3.40.640.10 63 279 1.2E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS00590 55c56339ef7d5165043233029e799e43 406 SUPERFAMILY SSF53383 28 400 1.73E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS00590 55c56339ef7d5165043233029e799e43 406 Pfam PF00155 Aminotransferase class I and II 45 394 2.3E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RMET_RS00590 55c56339ef7d5165043233029e799e43 406 PANTHER PTHR13693 6 402 5.5E-151 T 22-04-2016 RMET_RS00590 55c56339ef7d5165043233029e799e43 406 PANTHER PTHR13693:SF53 6 402 5.5E-151 T 22-04-2016 RMET_RS00590 55c56339ef7d5165043233029e799e43 406 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 2 398 49.66 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RMET_RS00590 55c56339ef7d5165043233029e799e43 406 Gene3D G3DSA:3.90.1150.10 280 396 3.0E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS08760 eee40e6b229597efe7cb75f541d70710 398 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 385 5.3E-62 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS08760 eee40e6b229597efe7cb75f541d70710 398 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 304 6.4E-25 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS08760 eee40e6b229597efe7cb75f541d70710 398 Gene3D G3DSA:2.40.50.100 84 117 1.2E-18 T 22-04-2016 RMET_RS08760 eee40e6b229597efe7cb75f541d70710 398 Gene3D G3DSA:2.40.50.100 192 218 1.2E-18 T 22-04-2016 RMET_RS08760 eee40e6b229597efe7cb75f541d70710 398 SUPERFAMILY SSF111369 73 308 1.7E-31 T 22-04-2016 RMET_RS08760 eee40e6b229597efe7cb75f541d70710 398 PANTHER PTHR30469:SF4 11 396 5.0E-113 T 22-04-2016 RMET_RS08760 eee40e6b229597efe7cb75f541d70710 398 PANTHER PTHR30469 11 396 5.0E-113 T 22-04-2016 RMET_RS01695 f0ed8cf90084233085d3df6465b2c25c 272 PANTHER PTHR10108 15 170 1.5E-17 T 22-04-2016 RMET_RS01695 f0ed8cf90084233085d3df6465b2c25c 272 Gene3D G3DSA:3.40.50.150 22 152 3.4E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01695 f0ed8cf90084233085d3df6465b2c25c 272 Gene3D G3DSA:3.40.50.150 224 271 3.4E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS01695 f0ed8cf90084233085d3df6465b2c25c 272 Pfam PF13649 Methyltransferase domain 51 143 1.7E-17 T 22-04-2016 RMET_RS01695 f0ed8cf90084233085d3df6465b2c25c 272 SUPERFAMILY SSF53335 12 271 5.68E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS09660 410aa58d900f240839cc930ab746d06f 440 Gene3D G3DSA:3.90.1300.10 5 439 5.9E-120 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09660 410aa58d900f240839cc930ab746d06f 440 SUPERFAMILY SSF75304 5 440 7.98E-117 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09660 410aa58d900f240839cc930ab746d06f 440 PANTHER PTHR11895 5 440 1.4E-120 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09660 410aa58d900f240839cc930ab746d06f 440 Pfam PF01425 Amidase 23 429 7.4E-87 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 Gene3D G3DSA:3.40.50.720 1 96 3.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 Gene3D G3DSA:3.40.50.720 357 422 3.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 Gene3D G3DSA:3.40.50.720 199 274 3.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 SUPERFAMILY SSF54373 276 369 1.96E-8 T 22-04-2016 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 Gene3D G3DSA:3.30.9.10 275 322 3.9E-6 T 22-04-2016 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 Gene3D G3DSA:3.30.9.10 140 198 3.9E-6 T 22-04-2016 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 PANTHER PTHR13847 1 63 5.9E-82 T 22-04-2016 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 PANTHER PTHR13847 107 421 5.9E-82 T 22-04-2016 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 Pfam PF01266 FAD dependent oxidoreductase 3 407 2.7E-58 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 PANTHER PTHR13847:SF148 1 63 5.9E-82 T 22-04-2016 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 PANTHER PTHR13847:SF148 107 421 5.9E-82 T 22-04-2016 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 420 47.819 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 SUPERFAMILY SSF51905 369 422 2.46E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 SUPERFAMILY SSF51905 1 54 2.46E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03525 e9f8a84d52de518d1d957d91c2cf4401 425 SUPERFAMILY SSF51905 107 276 2.46E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS02790 356123a2bb43bf23faf2b5c35e4c085e 363 Gene3D G3DSA:1.10.10.10 2 132 1.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02790 356123a2bb43bf23faf2b5c35e4c085e 363 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 87 3.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS02790 356123a2bb43bf23faf2b5c35e4c085e 363 SUPERFAMILY SSF46785 28 144 1.9E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS02790 356123a2bb43bf23faf2b5c35e4c085e 363 PANTHER PTHR38431 139 355 1.8E-31 T 22-04-2016 RMET_RS02790 356123a2bb43bf23faf2b5c35e4c085e 363 Gene3D G3DSA:3.40.190.10 208 311 1.2E-11 T 22-04-2016 RMET_RS02790 356123a2bb43bf23faf2b5c35e4c085e 363 Pfam PF12727 PBP superfamily domain 145 321 5.3E-55 T 22-04-2016 IPR024370 PBP domain RMET_RS02790 356123a2bb43bf23faf2b5c35e4c085e 363 SUPERFAMILY SSF53850 135 330 3.52E-13 T 22-04-2016 RMET_RS15170 353c41690acb9fc7093393cbeaee3cfc 115 Pfam PF11171 Protein of unknown function (DUF2958) 4 113 4.1E-43 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 RMET_RS23100 c53a3086d04becf5cc28160f7ab01de7 214 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 1 116 4.7E-49 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RMET_RS23100 c53a3086d04becf5cc28160f7ab01de7 214 Gene3D G3DSA:3.30.460.10 1 125 5.4E-49 T 22-04-2016 RMET_RS23100 c53a3086d04becf5cc28160f7ab01de7 214 Pfam PF08335 GlnD PII-uridylyltransferase 145 212 2.5E-18 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RMET_RS23100 c53a3086d04becf5cc28160f7ab01de7 214 SUPERFAMILY SSF81593 135 213 1.41E-19 T 22-04-2016 RMET_RS23100 c53a3086d04becf5cc28160f7ab01de7 214 PANTHER PTHR30621 1 212 1.3E-78 T 22-04-2016 RMET_RS23100 c53a3086d04becf5cc28160f7ab01de7 214 SUPERFAMILY SSF81301 1 134 7.85E-51 T 22-04-2016 RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 SUPERFAMILY SSF52540 2 92 4.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 SUPERFAMILY SSF52540 119 250 4.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 Pfam PF12848 ABC transporter 217 298 4.2E-26 T 22-04-2016 IPR032781 ABC-transporter extension domain RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 Pfam PF00005 ABC transporter 17 178 5.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 Pfam PF00005 ABC transporter 340 480 3.1E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 SUPERFAMILY SSF52540 336 526 2.06E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 PANTHER PTHR19211 1 554 3.4E-263 T 22-04-2016 RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 Gene3D G3DSA:3.40.50.300 1 266 8.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 Gene3D G3DSA:3.40.50.300 310 539 5.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 SMART SM00382 347 524 7.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 SMART SM00382 26 222 1.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 PANTHER PTHR19211:SF49 1 554 3.4E-263 T 22-04-2016 RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS08810 089223efc90fea76642ef83ac1cd43db 554 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS13410 e416ae5f5ef942ecb203b65115d10149 371 Pfam PF04143 Sulphur transport 30 358 2.6E-62 T 22-04-2016 IPR007272 Sulphur transport domain RMET_RS13410 e416ae5f5ef942ecb203b65115d10149 371 PANTHER PTHR30574 6 359 6.1E-43 T 22-04-2016 RMET_RS13410 e416ae5f5ef942ecb203b65115d10149 371 PANTHER PTHR30574:SF1 6 359 6.1E-43 T 22-04-2016 RMET_RS01835 ef192e91d4eb68fc873bd7b19583ec76 298 PANTHER PTHR22908 5 291 8.2E-83 T 22-04-2016 RMET_RS01835 ef192e91d4eb68fc873bd7b19583ec76 298 Pfam PF07728 AAA domain (dynein-related subfamily) 38 192 1.7E-11 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RMET_RS01835 ef192e91d4eb68fc873bd7b19583ec76 298 SMART SM00382 34 235 1.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS01835 ef192e91d4eb68fc873bd7b19583ec76 298 Gene3D G3DSA:3.40.50.300 31 212 5.7E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01835 ef192e91d4eb68fc873bd7b19583ec76 298 PANTHER PTHR22908:SF67 5 291 8.2E-83 T 22-04-2016 RMET_RS01835 ef192e91d4eb68fc873bd7b19583ec76 298 SUPERFAMILY SSF52540 109 278 4.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01835 ef192e91d4eb68fc873bd7b19583ec76 298 SUPERFAMILY SSF52540 27 76 4.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 PANTHER PTHR10587:SF15 110 284 2.4E-52 T 22-04-2016 RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 PANTHER PTHR10587 110 284 2.4E-52 T 22-04-2016 RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 SUPERFAMILY SSF53448 118 399 7.74E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 Pfam PF07238 PilZ domain 537 631 1.2E-5 T 22-04-2016 IPR009875 PilZ domain GO:0035438 RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 PRINTS PR01439 Cellulose synthase subunit A signature 125 144 2.1E-10 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 PRINTS PR01439 Cellulose synthase subunit A signature 508 529 2.1E-10 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 PRINTS PR01439 Cellulose synthase subunit A signature 370 396 2.1E-10 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 PRINTS PR01439 Cellulose synthase subunit A signature 36 56 2.1E-10 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 SUPERFAMILY SSF141371 537 634 9.42E-5 T 22-04-2016 RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 Gene3D G3DSA:3.90.550.10 117 346 6.3E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS08705 6040c6a2c80c7769e93b559ee6cfe644 658 Pfam PF13641 Glycosyltransferase like family 2 116 344 6.0E-31 T 22-04-2016 RMET_RS07490 34fda1c6a5cbdcb4a7a128a2406f83a1 94 Gene3D G3DSA:1.10.1220.10 47 83 6.2E-6 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RMET_RS07490 34fda1c6a5cbdcb4a7a128a2406f83a1 94 SUPERFAMILY SSF47598 47 88 4.89E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RMET_RS16465 0b2610a18217c00e205b5593515cfd97 750 Pfam PF05140 ResB-like family 28 704 2.4E-162 T 22-04-2016 IPR007816 ResB-like domain RMET_RS16465 0b2610a18217c00e205b5593515cfd97 750 PANTHER PTHR31566 587 734 7.3E-38 T 22-04-2016 RMET_RS16465 0b2610a18217c00e205b5593515cfd97 750 PANTHER PTHR31566 16 194 7.3E-38 T 22-04-2016 RMET_RS16465 0b2610a18217c00e205b5593515cfd97 750 PANTHER PTHR31566 229 448 7.3E-38 T 22-04-2016 RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 Pfam PF00005 ABC transporter 50 199 3.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 SUPERFAMILY SSF52540 25 271 6.34E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 PANTHER PTHR24220 24 337 3.8E-140 T 22-04-2016 RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 335 2.6E-27 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 SMART SM00382 58 257 3.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 PANTHER PTHR24220:SF336 24 337 3.8E-140 T 22-04-2016 RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 Gene3D G3DSA:3.40.50.300 21 273 2.3E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09700 8c35369c049334b24667f7ce04878b2c 359 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 316 6.7E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RMET_RS05220 aea99ec652555596427158cb21320287 566 Pfam PF02272 DHHA1 domain 380 449 1.8E-14 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RMET_RS05220 aea99ec652555596427158cb21320287 566 Pfam PF01368 DHH family 75 200 2.0E-10 T 22-04-2016 IPR001667 DDH domain RMET_RS05220 aea99ec652555596427158cb21320287 566 SUPERFAMILY SSF64182 48 464 9.16E-121 T 22-04-2016 RMET_RS05220 aea99ec652555596427158cb21320287 566 PANTHER PTHR30255:SF2 1 566 2.4E-201 T 22-04-2016 RMET_RS05220 aea99ec652555596427158cb21320287 566 PANTHER PTHR30255 1 566 2.4E-201 T 22-04-2016 RMET_RS05220 aea99ec652555596427158cb21320287 566 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 564 6.1E-149 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RMET_RS00260 8df38908cb2c10d46e3684d69eb4b30a 499 PANTHER PTHR11895 10 498 5.6E-220 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS00260 8df38908cb2c10d46e3684d69eb4b30a 499 ProSitePatterns PS00571 Amidases signature. 153 184 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS00260 8df38908cb2c10d46e3684d69eb4b30a 499 SUPERFAMILY SSF75304 10 498 1.06E-162 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS00260 8df38908cb2c10d46e3684d69eb4b30a 499 Pfam PF01425 Amidase 27 481 9.7E-155 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS00260 8df38908cb2c10d46e3684d69eb4b30a 499 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 14 492 95.328 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS00260 8df38908cb2c10d46e3684d69eb4b30a 499 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 492 4.9E-176 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS00260 8df38908cb2c10d46e3684d69eb4b30a 499 PANTHER PTHR11895:SF7 10 498 5.6E-220 T 22-04-2016 RMET_RS00260 8df38908cb2c10d46e3684d69eb4b30a 499 Gene3D G3DSA:3.90.1300.10 10 498 4.0E-183 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 Gene3D G3DSA:3.30.930.10 418 594 5.8E-111 T 22-04-2016 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 Gene3D G3DSA:3.30.930.10 135 280 5.8E-111 T 22-04-2016 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 568 7.1E-106 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 SUPERFAMILY SSF55681 113 296 2.99E-105 T 22-04-2016 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 SUPERFAMILY SSF55681 434 594 2.99E-105 T 22-04-2016 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 Gene3D G3DSA:2.40.50.140 4 110 1.4E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 Gene3D G3DSA:3.30.1360.30 281 417 3.1E-44 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 1.7E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 1.7E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 528 542 1.7E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 484 500 1.7E-25 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 Pfam PF01336 OB-fold nucleic acid binding domain 21 105 2.0E-17 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 PANTHER PTHR22594:SF5 375 581 3.8E-243 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 PANTHER PTHR22594:SF5 3 301 3.8E-243 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 573 35.757 T 22-04-2016 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 PANTHER PTHR22594 375 581 3.8E-243 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 PANTHER PTHR22594 3 301 3.8E-243 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 SUPERFAMILY SSF55261 295 420 9.81E-42 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 592 2.6E-244 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 SUPERFAMILY SSF50249 4 108 4.38E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS01915 5f4e9dc808fbaa5e4b45e369222b9f29 602 Pfam PF02938 GAD domain 312 410 6.1E-27 T 22-04-2016 IPR029351 GAD domain RMET_RS06760 7d28f7cda5cb11cb4a0b621ef4f7adff 350 Pfam PF00437 Type II/IV secretion system protein 27 293 1.8E-77 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS06760 7d28f7cda5cb11cb4a0b621ef4f7adff 350 SUPERFAMILY SSF52540 26 292 2.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06760 7d28f7cda5cb11cb4a0b621ef4f7adff 350 PANTHER PTHR30258 24 316 9.4E-88 T 22-04-2016 RMET_RS06760 7d28f7cda5cb11cb4a0b621ef4f7adff 350 PANTHER PTHR30258:SF12 24 316 9.4E-88 T 22-04-2016 RMET_RS06760 7d28f7cda5cb11cb4a0b621ef4f7adff 350 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 15 314 3.7E-120 T 22-04-2016 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 RMET_RS06760 7d28f7cda5cb11cb4a0b621ef4f7adff 350 Gene3D G3DSA:3.30.450.90 28 119 7.9E-13 T 22-04-2016 RMET_RS06760 7d28f7cda5cb11cb4a0b621ef4f7adff 350 Gene3D G3DSA:3.40.50.300 134 319 2.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS21990 43f5c35409a5a5d4479b31dbff10311c 323 SUPERFAMILY SSF103473 3 322 1.57E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS21990 43f5c35409a5a5d4479b31dbff10311c 323 PANTHER PTHR23505 3 323 7.4E-45 T 22-04-2016 RMET_RS21990 43f5c35409a5a5d4479b31dbff10311c 323 Pfam PF07690 Major Facilitator Superfamily 2 288 3.8E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS21990 43f5c35409a5a5d4479b31dbff10311c 323 Gene3D G3DSA:1.20.1250.20 141 323 1.1E-20 T 22-04-2016 RMET_RS21990 43f5c35409a5a5d4479b31dbff10311c 323 Gene3D G3DSA:1.20.1250.20 4 124 7.1E-19 T 22-04-2016 RMET_RS13740 8b919ac8a8ee774da8056c6eb5eee27a 278 Gene3D G3DSA:3.40.1130.10 39 160 3.7E-13 T 22-04-2016 RMET_RS13740 8b919ac8a8ee774da8056c6eb5eee27a 278 SMART SM00563 66 178 8.4E-35 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RMET_RS13740 8b919ac8a8ee774da8056c6eb5eee27a 278 PANTHER PTHR10434 30 177 1.2E-40 T 22-04-2016 RMET_RS13740 8b919ac8a8ee774da8056c6eb5eee27a 278 Pfam PF01553 Acyltransferase 64 175 3.7E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RMET_RS13740 8b919ac8a8ee774da8056c6eb5eee27a 278 SUPERFAMILY SSF69593 12 243 4.58E-27 T 22-04-2016 RMET_RS13740 8b919ac8a8ee774da8056c6eb5eee27a 278 PANTHER PTHR10434:SF8 30 177 1.2E-40 T 22-04-2016 RMET_RS09560 dd34ec73a93cd2b75561b9da5453a5bf 116 SUPERFAMILY SSF51182 10 111 4.58E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS09560 dd34ec73a93cd2b75561b9da5453a5bf 116 Gene3D G3DSA:2.60.120.10 12 106 1.6E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS09560 dd34ec73a93cd2b75561b9da5453a5bf 116 Pfam PF07883 Cupin domain 41 106 9.8E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RMET_RS17185 64272e9eacfca4a5b02a9978fa69e099 266 SUPERFAMILY SSF46626 151 265 5.42E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17185 64272e9eacfca4a5b02a9978fa69e099 266 SUPERFAMILY SSF46626 27 146 5.49E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17185 64272e9eacfca4a5b02a9978fa69e099 266 Gene3D G3DSA:1.10.760.10 73 265 3.4E-56 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17185 64272e9eacfca4a5b02a9978fa69e099 266 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 40 266 8.1E-77 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 RMET_RS17185 64272e9eacfca4a5b02a9978fa69e099 266 PIRSF PIRSF038455 1 266 3.2E-79 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 RMET_RS14060 a7342683d670fbdd100e8792e6740616 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 257 5.5E-84 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RMET_RS14060 a7342683d670fbdd100e8792e6740616 270 PANTHER PTHR30589 1 263 1.4E-108 T 22-04-2016 RMET_RS14060 a7342683d670fbdd100e8792e6740616 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 20.415 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RMET_RS14060 a7342683d670fbdd100e8792e6740616 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 263 1.5E-83 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RMET_RS14060 a7342683d670fbdd100e8792e6740616 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RMET_RS14060 a7342683d670fbdd100e8792e6740616 270 PANTHER PTHR30589:SF0 1 263 1.4E-108 T 22-04-2016 RMET_RS15580 d8f91f8bd5575b1be53275d45b1904a4 214 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 203 26.935 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RMET_RS15580 d8f91f8bd5575b1be53275d45b1904a4 214 Gene3D G3DSA:3.40.50.300 3 197 4.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15580 d8f91f8bd5575b1be53275d45b1904a4 214 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 3.0E-46 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RMET_RS15580 d8f91f8bd5575b1be53275d45b1904a4 214 PANTHER PTHR10695 1 198 2.0E-68 T 22-04-2016 RMET_RS15580 d8f91f8bd5575b1be53275d45b1904a4 214 SUPERFAMILY SSF52540 1 193 1.51E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15580 d8f91f8bd5575b1be53275d45b1904a4 214 Pfam PF01121 Dephospho-CoA kinase 4 181 8.9E-57 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 Gene3D G3DSA:3.90.45.10 5 164 2.8E-65 T 22-04-2016 IPR023635 Peptide deformylase RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 PANTHER PTHR10458:SF10 1 165 3.6E-85 T 22-04-2016 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 PRINTS PR01576 Peptide deformylase signature 121 150 1.8E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.8E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 PRINTS PR01576 Peptide deformylase signature 102 120 1.8E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 PRINTS PR01576 Peptide deformylase signature 90 101 1.8E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 SUPERFAMILY SSF56420 3 164 1.7E-62 T 22-04-2016 IPR023635 Peptide deformylase RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 PIRSF PIRSF004749 1 168 3.9E-58 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 Pfam PF01327 Polypeptide deformylase 5 152 1.5E-51 T 22-04-2016 IPR023635 Peptide deformylase RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 161 1.4E-57 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 PANTHER PTHR10458 1 165 3.6E-85 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS17910 e6dd544039207d20d67571ce5533b295 168 Hamap MF_00163 Peptide deformylase [def]. 2 163 30.418 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RMET_RS11500 340c8f6b086e023c1d3558da05716833 291 SUPERFAMILY SSF52540 1 266 9.46E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11500 340c8f6b086e023c1d3558da05716833 291 PANTHER PTHR13696 1 274 2.9E-35 T 22-04-2016 RMET_RS11500 340c8f6b086e023c1d3558da05716833 291 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 194 2.2E-25 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RMET_RS11500 340c8f6b086e023c1d3558da05716833 291 Gene3D G3DSA:3.40.50.300 1 268 1.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 Gene3D G3DSA:1.10.10.10 2 84 4.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 SUPERFAMILY SSF46785 6 82 8.17E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 PANTHER PTHR30118:SF8 1 306 5.9E-97 T 22-04-2016 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 PANTHER PTHR30118 1 306 5.9E-97 T 22-04-2016 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.2E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 Pfam PF03466 LysR substrate binding domain 95 297 1.8E-22 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 Gene3D G3DSA:3.40.190.10 90 172 7.4E-31 T 22-04-2016 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 Gene3D G3DSA:3.40.190.10 272 298 7.4E-31 T 22-04-2016 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 SUPERFAMILY SSF53850 90 295 3.02E-35 T 22-04-2016 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS00705 9e514bd3afed18e64b4b639bea20db77 311 Gene3D G3DSA:3.40.190.10 173 268 7.6E-17 T 22-04-2016 RMET_RS16660 e0b042b0797dddef02012ecb365b90fe 337 PANTHER PTHR11019 68 336 7.5E-42 T 22-04-2016 RMET_RS16660 e0b042b0797dddef02012ecb365b90fe 337 SMART SM00342 246 331 6.4E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS16660 e0b042b0797dddef02012ecb365b90fe 337 Gene3D G3DSA:1.10.10.60 283 330 2.9E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS16660 e0b042b0797dddef02012ecb365b90fe 337 SUPERFAMILY SSF46689 230 280 4.89E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS16660 e0b042b0797dddef02012ecb365b90fe 337 PANTHER PTHR11019:SF54 68 336 7.5E-42 T 22-04-2016 RMET_RS16660 e0b042b0797dddef02012ecb365b90fe 337 Gene3D G3DSA:1.10.10.60 230 282 5.2E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS16660 e0b042b0797dddef02012ecb365b90fe 337 Pfam PF14525 AraC-binding-like domain 36 209 8.1E-53 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RMET_RS16660 e0b042b0797dddef02012ecb365b90fe 337 Pfam PF12833 Helix-turn-helix domain 252 333 9.0E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RMET_RS03080 989370363f64c2dcdd2f2cbd2be18b05 535 SUPERFAMILY SSF52096 237 517 4.78E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS03080 989370363f64c2dcdd2f2cbd2be18b05 535 PANTHER PTHR22855 1 535 0.0 T 22-04-2016 RMET_RS03080 989370363f64c2dcdd2f2cbd2be18b05 535 PANTHER PTHR22855:SF35 1 535 0.0 T 22-04-2016 RMET_RS03080 989370363f64c2dcdd2f2cbd2be18b05 535 Pfam PF01039 Carboxyl transferase domain 48 524 8.1E-152 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS03080 989370363f64c2dcdd2f2cbd2be18b05 535 Gene3D G3DSA:3.90.226.10 29 273 8.0E-82 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS03080 989370363f64c2dcdd2f2cbd2be18b05 535 Gene3D G3DSA:3.90.226.10 274 530 2.4E-95 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS03080 989370363f64c2dcdd2f2cbd2be18b05 535 SUPERFAMILY SSF52096 23 270 2.72E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS15065 30e3c3cf02292e86e1dcf3882142604f 143 Pfam PF00892 EamA-like transporter family 8 141 3.7E-22 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS15065 30e3c3cf02292e86e1dcf3882142604f 143 SUPERFAMILY SSF103481 41 142 3.92E-18 T 22-04-2016 RMET_RS15065 30e3c3cf02292e86e1dcf3882142604f 143 PANTHER PTHR22911 1 141 1.8E-24 T 22-04-2016 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 PANTHER PTHR23508 16 344 1.2E-229 T 22-04-2016 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 PANTHER PTHR23508 464 561 1.2E-229 T 22-04-2016 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 Pfam PF00083 Sugar (and other) transporter 29 239 1.5E-28 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 Pfam PF00083 Sugar (and other) transporter 453 560 1.6E-5 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 Gene3D G3DSA:1.20.1250.20 462 557 3.7E-25 T 22-04-2016 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 Gene3D G3DSA:1.20.1250.20 254 342 3.7E-25 T 22-04-2016 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 Gene3D G3DSA:1.20.1250.20 24 230 6.8E-25 T 22-04-2016 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 SUPERFAMILY SSF103473 19 343 3.92E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 SUPERFAMILY SSF103473 466 559 3.92E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 PANTHER PTHR23508:SF7 16 344 1.2E-229 T 22-04-2016 RMET_RS02340 0bf9ce0a126a1a0e66880254cf260fc9 565 PANTHER PTHR23508:SF7 464 561 1.2E-229 T 22-04-2016 RMET_RS03515 add148d2484c162a18478eb25b19018b 438 Gene3D G3DSA:3.30.465.10 340 426 1.6E-25 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS03515 add148d2484c162a18478eb25b19018b 438 Pfam PF01595 Domain of unknown function DUF21 4 194 6.3E-39 T 22-04-2016 IPR002550 Domain of unknown function DUF21 RMET_RS03515 add148d2484c162a18478eb25b19018b 438 SMART SM01091 347 427 1.6E-27 T 22-04-2016 IPR005170 Transporter-associated domain RMET_RS03515 add148d2484c162a18478eb25b19018b 438 SMART SM00116 286 334 0.0083 T 22-04-2016 IPR000644 CBS domain RMET_RS03515 add148d2484c162a18478eb25b19018b 438 Gene3D G3DSA:3.10.580.10 198 337 8.2E-16 T 22-04-2016 RMET_RS03515 add148d2484c162a18478eb25b19018b 438 SUPERFAMILY SSF54631 197 337 1.04E-21 T 22-04-2016 RMET_RS03515 add148d2484c162a18478eb25b19018b 438 PANTHER PTHR22777 3 426 1.8E-164 T 22-04-2016 RMET_RS03515 add148d2484c162a18478eb25b19018b 438 Pfam PF03471 Transporter associated domain 348 426 5.8E-20 T 22-04-2016 IPR005170 Transporter-associated domain RMET_RS03515 add148d2484c162a18478eb25b19018b 438 SUPERFAMILY SSF56176 345 430 8.18E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS03515 add148d2484c162a18478eb25b19018b 438 Pfam PF00571 CBS domain 285 334 4.5E-6 T 22-04-2016 IPR000644 CBS domain RMET_RS03515 add148d2484c162a18478eb25b19018b 438 PANTHER PTHR22777:SF16 3 426 1.8E-164 T 22-04-2016 RMET_RS11940 2609f4aa3af33be20062f73005470aed 532 Gene3D G3DSA:3.60.110.10 254 498 1.2E-17 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS11940 2609f4aa3af33be20062f73005470aed 532 PANTHER PTHR38686 1 526 7.3E-67 T 22-04-2016 RMET_RS11940 2609f4aa3af33be20062f73005470aed 532 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 65 481 5.3E-90 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RMET_RS11940 2609f4aa3af33be20062f73005470aed 532 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 6 518 22.157 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RMET_RS11940 2609f4aa3af33be20062f73005470aed 532 Pfam PF00795 Carbon-nitrogen hydrolase 273 503 9.2E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS11940 2609f4aa3af33be20062f73005470aed 532 SUPERFAMILY SSF56317 230 511 3.4E-31 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RMET_RS30045 fdb775ebd939eb7cead6bcc499cddb33 132 PANTHER PTHR30349 18 132 8.3E-38 T 22-04-2016 RMET_RS30045 fdb775ebd939eb7cead6bcc499cddb33 132 SUPERFAMILY SSF56349 18 132 1.74E-29 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS30045 fdb775ebd939eb7cead6bcc499cddb33 132 Pfam PF00589 Phage integrase family 19 132 3.1E-25 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS30045 fdb775ebd939eb7cead6bcc499cddb33 132 Gene3D G3DSA:1.10.443.10 18 132 2.9E-31 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS30045 fdb775ebd939eb7cead6bcc499cddb33 132 PANTHER PTHR30349:SF17 18 132 8.3E-38 T 22-04-2016 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 Gene3D G3DSA:3.50.50.60 16 227 2.3E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 Gene3D G3DSA:3.50.50.60 313 500 6.3E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 Pfam PF00743 Flavin-binding monooxygenase-like 22 354 2.6E-14 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 SUPERFAMILY SSF51905 21 257 4.72E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 PANTHER PTHR23023:SF132 18 509 1.2E-229 T 22-04-2016 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 PANTHER PTHR23023 18 509 1.2E-229 T 22-04-2016 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 22 44 2.4E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 151 2.4E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 184 208 2.4E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RMET_RS18075 cf37424e77b93ee42aa06795c43461a1 521 SUPERFAMILY SSF51905 293 501 6.85E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16035 e5cfc1ddb3402c20a04ea37d9791183f 255 Pfam PF01048 Phosphorylase superfamily 3 251 9.6E-51 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RMET_RS16035 e5cfc1ddb3402c20a04ea37d9791183f 255 PANTHER PTHR21234:SF16 1 252 1.7E-37 T 22-04-2016 RMET_RS16035 e5cfc1ddb3402c20a04ea37d9791183f 255 Gene3D G3DSA:3.40.50.1580 1 129 3.8E-63 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RMET_RS16035 e5cfc1ddb3402c20a04ea37d9791183f 255 Gene3D G3DSA:3.40.50.1580 161 253 3.8E-63 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RMET_RS16035 e5cfc1ddb3402c20a04ea37d9791183f 255 PANTHER PTHR21234 1 252 1.7E-37 T 22-04-2016 IPR018017 Nucleoside phosphorylase RMET_RS16035 e5cfc1ddb3402c20a04ea37d9791183f 255 SUPERFAMILY SSF53167 1 248 2.36E-59 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RMET_RS16035 e5cfc1ddb3402c20a04ea37d9791183f 255 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 244 2.6E-34 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 RMET_RS09580 ef8e348c68f0782d2595607b64c4f9e6 312 SUPERFAMILY SSF49482 21 309 3.66E-89 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RMET_RS09580 ef8e348c68f0782d2595607b64c4f9e6 312 PANTHER PTHR33711 11 301 3.7E-105 T 22-04-2016 RMET_RS09580 ef8e348c68f0782d2595607b64c4f9e6 312 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 146 174 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RMET_RS09580 ef8e348c68f0782d2595607b64c4f9e6 312 Gene3D G3DSA:2.60.130.10 22 305 1.7E-90 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RMET_RS09580 ef8e348c68f0782d2595607b64c4f9e6 312 Pfam PF04444 Catechol dioxygenase N terminus 38 108 4.0E-23 T 22-04-2016 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 RMET_RS09580 ef8e348c68f0782d2595607b64c4f9e6 312 PANTHER PTHR33711:SF4 11 301 3.7E-105 T 22-04-2016 RMET_RS09580 ef8e348c68f0782d2595607b64c4f9e6 312 Pfam PF00775 Dioxygenase 118 300 3.4E-50 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RMET_RS05195 00f9f23ea14b856e27ffc5802f5d2539 234 Pfam PF05433 Glycine zipper 2TM domain 147 186 5.6E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RMET_RS17405 b705ec891474fe1720c72ea5c324edc5 292 Pfam PF01435 Peptidase family M48 80 290 5.2E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RMET_RS17405 b705ec891474fe1720c72ea5c324edc5 292 Hamap MF_00188 Protease HtpX [htpX]. 1 291 25.288 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 RMET_RS17405 b705ec891474fe1720c72ea5c324edc5 292 PANTHER PTHR10120:SF19 1 289 6.2E-96 T 22-04-2016 RMET_RS17405 b705ec891474fe1720c72ea5c324edc5 292 Gene3D G3DSA:3.30.2010.10 76 161 8.0E-31 T 22-04-2016 RMET_RS17405 b705ec891474fe1720c72ea5c324edc5 292 PANTHER PTHR10120 1 289 6.2E-96 T 22-04-2016 RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 SUPERFAMILY SSF52540 364 613 2.88E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 SMART SM00382 390 600 9.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 Pfam PF00005 ABC transporter 382 543 8.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 594 614 9.7E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 PANTHER PTHR24220 483 614 6.2E-110 T 22-04-2016 RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 PANTHER PTHR24220 367 465 6.2E-110 T 22-04-2016 RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 323 2.5E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 PANTHER PTHR24220:SF525 483 614 6.2E-110 T 22-04-2016 RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 PANTHER PTHR24220:SF525 367 465 6.2E-110 T 22-04-2016 RMET_RS17640 1d0481f884de1577a45792c6ef784373 617 Gene3D G3DSA:3.40.50.300 363 612 2.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11830 f2956c321be94053c3d33c8a400cf4eb 316 Pfam PF06834 TraU protein 38 304 1.3E-71 T 22-04-2016 IPR009649 TraU RMET_RS11830 f2956c321be94053c3d33c8a400cf4eb 316 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 30 314 2.4E-132 T 22-04-2016 IPR026331 Integrating conjugative element protein PFL_4710 RMET_RS16435 9dcabf559d4c5fb0f8b9888f0aa9bf01 224 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 20 221 24.809 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 RMET_RS16435 9dcabf559d4c5fb0f8b9888f0aa9bf01 224 PANTHER PTHR36964 19 223 6.1E-48 T 22-04-2016 RMET_RS16435 9dcabf559d4c5fb0f8b9888f0aa9bf01 224 Pfam PF01794 Ferric reductase like transmembrane component 68 182 5.5E-12 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain RMET_RS24050 f0c893f64ac4b85a9cee817b66f8e9d7 94 Gene3D G3DSA:3.40.50.2300 63 94 2.0E-4 T 22-04-2016 RMET_RS24050 f0c893f64ac4b85a9cee817b66f8e9d7 94 SUPERFAMILY SSF52172 58 93 2.42E-5 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS06600 5bf010d1a1b47bcae103f36e270f61b2 136 PANTHER PTHR30007 5 132 1.9E-24 T 22-04-2016 RMET_RS06600 5bf010d1a1b47bcae103f36e270f61b2 136 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 85 2.2E-27 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family RMET_RS06600 5bf010d1a1b47bcae103f36e270f61b2 136 PANTHER PTHR30007:SF0 5 132 1.9E-24 T 22-04-2016 RMET_RS09335 b7948385547126122f1c79ddfb78581e 516 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 16 502 43.944 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 RMET_RS09335 b7948385547126122f1c79ddfb78581e 516 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 22 485 7.2E-136 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 RMET_RS09335 b7948385547126122f1c79ddfb78581e 516 PANTHER PTHR32057 31 516 3.7E-203 T 22-04-2016 RMET_RS17975 423485f021ff6d294fee08cb3fbaee5d 337 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 321 3.7E-18 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RMET_RS17975 423485f021ff6d294fee08cb3fbaee5d 337 PANTHER PTHR10996:SF127 1 321 4.0E-97 T 22-04-2016 RMET_RS17975 423485f021ff6d294fee08cb3fbaee5d 337 Gene3D G3DSA:3.40.50.720 1 113 2.4E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS17975 423485f021ff6d294fee08cb3fbaee5d 337 SUPERFAMILY SSF51735 102 297 1.19E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS17975 423485f021ff6d294fee08cb3fbaee5d 337 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 296 4.8E-52 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RMET_RS17975 423485f021ff6d294fee08cb3fbaee5d 337 PANTHER PTHR10996 1 321 4.0E-97 T 22-04-2016 RMET_RS17975 423485f021ff6d294fee08cb3fbaee5d 337 Gene3D G3DSA:3.40.50.720 114 297 3.2E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS17975 423485f021ff6d294fee08cb3fbaee5d 337 SUPERFAMILY SSF52283 1 136 2.08E-23 T 22-04-2016 RMET_RS01830 f912fd021e4fed50bd932639f49a3d3d 399 PIRSF PIRSF010256 1 380 5.4E-126 T 22-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 RMET_RS01830 f912fd021e4fed50bd932639f49a3d3d 399 SMART SM00327 206 371 3.5E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RMET_RS01830 f912fd021e4fed50bd932639f49a3d3d 399 PANTHER PTHR39338:SF1 2 385 2.8E-81 T 22-04-2016 RMET_RS01830 f912fd021e4fed50bd932639f49a3d3d 399 SUPERFAMILY SSF53300 208 337 4.93E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A RMET_RS01830 f912fd021e4fed50bd932639f49a3d3d 399 PANTHER PTHR39338 2 385 2.8E-81 T 22-04-2016 RMET_RS01830 f912fd021e4fed50bd932639f49a3d3d 399 Pfam PF05762 VWA domain containing CoxE-like protein 155 370 3.2E-73 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like RMET_RS01830 f912fd021e4fed50bd932639f49a3d3d 399 Gene3D G3DSA:3.40.50.410 209 313 6.2E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A RMET_RS02160 4aa7d3f3f68f2f586852375734543cf2 77 PANTHER PTHR32071 10 76 1.0E-15 T 22-04-2016 RMET_RS02160 4aa7d3f3f68f2f586852375734543cf2 77 PIRSF PIRSF002097 1 77 7.1E-32 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RMET_RS02160 4aa7d3f3f68f2f586852375734543cf2 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 57 77 4.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS02160 4aa7d3f3f68f2f586852375734543cf2 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 40 57 4.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS02160 4aa7d3f3f68f2f586852375734543cf2 77 Gene3D G3DSA:1.10.10.60 6 76 1.8E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS02160 4aa7d3f3f68f2f586852375734543cf2 77 Pfam PF02954 Bacterial regulatory protein, Fis family 34 74 1.0E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RMET_RS02160 4aa7d3f3f68f2f586852375734543cf2 77 SUPERFAMILY SSF46689 7 76 2.83E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS05730 d6b02a4103e961c0cbdf828961cfa9dd 395 Gene3D G3DSA:1.20.1250.20 16 190 5.1E-18 T 22-04-2016 RMET_RS05730 d6b02a4103e961c0cbdf828961cfa9dd 395 PIRSF PIRSF004925 10 395 1.2E-117 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter RMET_RS05730 d6b02a4103e961c0cbdf828961cfa9dd 395 PANTHER PTHR23522:SF3 6 394 2.1E-74 T 22-04-2016 RMET_RS05730 d6b02a4103e961c0cbdf828961cfa9dd 395 PANTHER PTHR23522 6 394 2.1E-74 T 22-04-2016 RMET_RS05730 d6b02a4103e961c0cbdf828961cfa9dd 395 Pfam PF12832 MFS_1 like family 17 370 2.8E-65 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain RMET_RS05730 d6b02a4103e961c0cbdf828961cfa9dd 395 Gene3D G3DSA:1.20.1250.20 205 385 4.1E-21 T 22-04-2016 RMET_RS05730 d6b02a4103e961c0cbdf828961cfa9dd 395 SUPERFAMILY SSF103473 15 390 2.22E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS29030 03dc54ead5576f7192def36801e4d77d 167 SUPERFAMILY SSF55073 14 166 2.2E-45 T 22-04-2016 IPR029787 Nucleotide cyclase RMET_RS29030 03dc54ead5576f7192def36801e4d77d 167 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 5 165 2.6E-41 T 22-04-2016 IPR000160 GGDEF domain RMET_RS29030 03dc54ead5576f7192def36801e4d77d 167 Gene3D G3DSA:3.30.70.270 12 166 2.5E-52 T 22-04-2016 RMET_RS29030 03dc54ead5576f7192def36801e4d77d 167 PANTHER PTHR10799 41 165 6.2E-30 T 22-04-2016 RMET_RS29030 03dc54ead5576f7192def36801e4d77d 167 Pfam PF00990 Diguanylate cyclase, GGDEF domain 11 165 4.1E-46 T 22-04-2016 IPR000160 GGDEF domain RMET_RS29030 03dc54ead5576f7192def36801e4d77d 167 SMART SM00267 2 167 1.1E-42 T 22-04-2016 IPR000160 GGDEF domain RMET_RS29030 03dc54ead5576f7192def36801e4d77d 167 PANTHER PTHR10799:SF774 41 165 6.2E-30 T 22-04-2016 RMET_RS03220 5c411465d756cf86b56cc31e36532b36 262 PANTHER PTHR37844 1 257 2.0E-26 T 22-04-2016 RMET_RS03220 5c411465d756cf86b56cc31e36532b36 262 Gene3D G3DSA:3.60.21.10 151 245 1.6E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS03220 5c411465d756cf86b56cc31e36532b36 262 Gene3D G3DSA:3.60.21.10 1 64 1.6E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS03220 5c411465d756cf86b56cc31e36532b36 262 SUPERFAMILY SSF56300 1 111 4.53E-26 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS03220 5c411465d756cf86b56cc31e36532b36 262 SUPERFAMILY SSF56300 159 240 4.53E-26 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS03220 5c411465d756cf86b56cc31e36532b36 262 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 238 1.3E-9 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 Gene3D G3DSA:1.10.150.240 21 82 4.8E-7 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 PANTHER PTHR18901:SF24 1 215 2.5E-87 T 22-04-2016 RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 7.3E-33 T 22-04-2016 IPR023214 HAD-like domain RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 216 7.1E-54 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 SUPERFAMILY SSF56784 4 217 7.73E-59 T 22-04-2016 IPR023214 HAD-like domain RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 PANTHER PTHR18901 1 215 2.5E-87 T 22-04-2016 RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 Gene3D G3DSA:3.40.50.1000 83 216 1.3E-42 T 22-04-2016 IPR023214 HAD-like domain RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 Gene3D G3DSA:3.40.50.1000 1 20 1.3E-42 T 22-04-2016 IPR023214 HAD-like domain RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 185 4.1E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS03570 d4c70c501fa9c2a33b13f1df0dc2eb74 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 181 3.9E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS18050 1b193646b9f21c58dcdc97cceb563efa 455 Pfam PF11170 Protein of unknown function (DUF2957) 97 451 8.2E-147 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 RMET_RS06200 fce762d3fee713bc38cbe2b0d1b1890f 354 PANTHER PTHR30482 11 354 1.1E-77 T 22-04-2016 RMET_RS06200 fce762d3fee713bc38cbe2b0d1b1890f 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 315 2.5E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS06200 fce762d3fee713bc38cbe2b0d1b1890f 354 PANTHER PTHR30482:SF2 11 354 1.1E-77 T 22-04-2016 RMET_RS00960 67679bb14c20c71009b8a5c706478ec9 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 30 0.0012 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS15165 1f17b22f9996b5d00f3382e0dc106c52 252 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 130 236 6.7E-30 T 22-04-2016 IPR018754 Protein of unknown function DUF2285 RMET_RS17665 6d2c348f19337c4aba9eb2faddb8e7e6 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 1.6E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS17665 6d2c348f19337c4aba9eb2faddb8e7e6 344 PANTHER PTHR30482:SF8 48 344 8.0E-111 T 22-04-2016 RMET_RS17665 6d2c348f19337c4aba9eb2faddb8e7e6 344 PANTHER PTHR30482 48 344 8.0E-111 T 22-04-2016 RMET_RS15650 a15f61bd36ca2e07bec7a975de5932a8 300 PANTHER PTHR35851 2 264 6.4E-37 T 22-04-2016 RMET_RS15650 a15f61bd36ca2e07bec7a975de5932a8 300 Pfam PF03799 Cell division protein FtsQ 122 239 2.0E-21 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB RMET_RS15650 a15f61bd36ca2e07bec7a975de5932a8 300 Pfam PF08478 POTRA domain, FtsQ-type 53 110 4.9E-15 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type RMET_RS15650 a15f61bd36ca2e07bec7a975de5932a8 300 PANTHER PTHR35851:SF1 2 264 6.4E-37 T 22-04-2016 RMET_RS15650 a15f61bd36ca2e07bec7a975de5932a8 300 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 247 20.664 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 RMET_RS04135 99a01e7d5ef20b36d4ec1300b7979a32 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 1.3E-151 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane RMET_RS04135 99a01e7d5ef20b36d4ec1300b7979a32 500 PANTHER PTHR35342 2 500 4.1E-296 T 22-04-2016 RMET_RS04135 99a01e7d5ef20b36d4ec1300b7979a32 500 PANTHER PTHR35342:SF2 2 500 4.1E-296 T 22-04-2016 RMET_RS05745 75b22add2f85e3a63008d19f9711f41f 300 Gene3D G3DSA:2.30.110.10 83 169 5.4E-7 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS05745 75b22add2f85e3a63008d19f9711f41f 300 Pfam PF07238 PilZ domain 169 290 2.4E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 RMET_RS05745 75b22add2f85e3a63008d19f9711f41f 300 Pfam PF12945 Flagellar protein YcgR 79 160 1.3E-15 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal RMET_RS05745 75b22add2f85e3a63008d19f9711f41f 300 SUPERFAMILY SSF141371 76 170 1.49E-15 T 22-04-2016 RMET_RS05745 75b22add2f85e3a63008d19f9711f41f 300 Gene3D G3DSA:2.40.10.220 192 290 2.7E-4 T 22-04-2016 RMET_RS05745 75b22add2f85e3a63008d19f9711f41f 300 SUPERFAMILY SSF141371 206 284 1.18E-6 T 22-04-2016 RMET_RS10615 91ab746e488b0f2cf20cfa982d7a47b5 263 PANTHER PTHR30151 15 263 1.1E-93 T 22-04-2016 RMET_RS10615 91ab746e488b0f2cf20cfa982d7a47b5 263 PANTHER PTHR30151:SF18 15 263 1.1E-93 T 22-04-2016 RMET_RS10615 91ab746e488b0f2cf20cfa982d7a47b5 263 Gene3D G3DSA:1.10.3720.10 58 252 6.6E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10615 91ab746e488b0f2cf20cfa982d7a47b5 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 250 1.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10615 91ab746e488b0f2cf20cfa982d7a47b5 263 SUPERFAMILY SSF161098 59 242 2.09E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06905 0b9af42c732a579d29023506f4b08c31 345 Pfam PF09084 NMT1/THI5 like 76 274 4.0E-14 T 22-04-2016 IPR015168 SsuA/THI5-like RMET_RS06905 0b9af42c732a579d29023506f4b08c31 345 Gene3D G3DSA:3.40.190.10 132 259 2.6E-30 T 22-04-2016 RMET_RS06905 0b9af42c732a579d29023506f4b08c31 345 PANTHER PTHR30024:SF11 10 338 9.7E-124 T 22-04-2016 RMET_RS06905 0b9af42c732a579d29023506f4b08c31 345 SUPERFAMILY SSF53850 47 287 4.01E-53 T 22-04-2016 RMET_RS06905 0b9af42c732a579d29023506f4b08c31 345 PANTHER PTHR30024 10 338 9.7E-124 T 22-04-2016 RMET_RS06905 0b9af42c732a579d29023506f4b08c31 345 SMART SM00062 49 270 2.8E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS06905 0b9af42c732a579d29023506f4b08c31 345 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 50 337 2.8E-72 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 RMET_RS03045 91bc25f06da4e7c8c73edc73b5c6f1a4 94 Gene3D G3DSA:1.10.10.10 2 78 3.5E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03045 91bc25f06da4e7c8c73edc73b5c6f1a4 94 SUPERFAMILY SSF46785 2 77 1.46E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03045 91bc25f06da4e7c8c73edc73b5c6f1a4 94 Pfam PF12840 Helix-turn-helix domain 9 63 6.5E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS03750 cedf0e14ab027f7d5f17da3cd7b59bb0 377 PANTHER PTHR19328:SF33 24 376 7.4E-98 T 22-04-2016 RMET_RS03750 cedf0e14ab027f7d5f17da3cd7b59bb0 377 PANTHER PTHR19328 24 376 7.4E-98 T 22-04-2016 RMET_RS03750 cedf0e14ab027f7d5f17da3cd7b59bb0 377 SUPERFAMILY SSF50952 35 375 6.41E-39 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RMET_RS03750 cedf0e14ab027f7d5f17da3cd7b59bb0 377 Pfam PF07995 Glucose / Sorbosone dehydrogenase 145 369 2.5E-16 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RMET_RS03750 cedf0e14ab027f7d5f17da3cd7b59bb0 377 Gene3D G3DSA:2.120.10.30 27 376 1.9E-69 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 SUPERFAMILY SSF53187 298 394 2.96E-93 T 22-04-2016 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 SUPERFAMILY SSF53187 4 197 2.96E-93 T 22-04-2016 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 PANTHER PTHR11014 1 397 2.5E-159 T 22-04-2016 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 PANTHER PTHR11014:SF63 1 397 2.5E-159 T 22-04-2016 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 SUPERFAMILY SSF55031 183 296 3.01E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 Gene3D G3DSA:3.40.630.10 298 395 3.6E-106 T 22-04-2016 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 Gene3D G3DSA:3.40.630.10 5 178 3.6E-106 T 22-04-2016 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 PIRSF PIRSF005962 1 397 2.6E-133 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 Gene3D G3DSA:3.30.70.360 181 297 5.5E-42 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 382 7.2E-111 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 Pfam PF01546 Peptidase family M20/M25/M40 73 357 2.6E-38 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS15815 77871d7895d1a9dbf138f61cde06c35b 397 Pfam PF07687 Peptidase dimerisation domain 185 279 5.7E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS15670 c9354c9d583fd2a5cddbc4b6bdc27801 413 Pfam PF01098 Cell cycle protein 44 405 9.3E-105 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RMET_RS15670 c9354c9d583fd2a5cddbc4b6bdc27801 413 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 42 403 8.1E-123 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RMET_RS15670 c9354c9d583fd2a5cddbc4b6bdc27801 413 PANTHER PTHR30474:SF2 24 405 1.3E-140 T 22-04-2016 RMET_RS15670 c9354c9d583fd2a5cddbc4b6bdc27801 413 PANTHER PTHR30474 24 405 1.3E-140 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RMET_RS15670 c9354c9d583fd2a5cddbc4b6bdc27801 413 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 39 412 40.386 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RMET_RS08495 6f7fb15116702a6309be451248e72715 494 PANTHER PTHR40269:SF1 37 488 2.1E-111 T 22-04-2016 RMET_RS08495 6f7fb15116702a6309be451248e72715 494 PANTHER PTHR40269 37 488 2.1E-111 T 22-04-2016 RMET_RS08495 6f7fb15116702a6309be451248e72715 494 Pfam PF11737 Protein of unknown function (DUF3300) 41 285 2.3E-97 T 22-04-2016 IPR021728 Protein of unknown function DUF3300 RMET_RS14475 a60e412494c421af65e74b8cb8f8ce2b 339 Gene3D G3DSA:3.20.20.30 9 333 3.5E-81 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS14475 a60e412494c421af65e74b8cb8f8ce2b 339 SUPERFAMILY SSF51679 8 333 2.88E-74 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS14475 a60e412494c421af65e74b8cb8f8ce2b 339 PANTHER PTHR30137:SF7 2 335 6.0E-116 T 22-04-2016 RMET_RS14475 a60e412494c421af65e74b8cb8f8ce2b 339 PANTHER PTHR30137 2 335 6.0E-116 T 22-04-2016 RMET_RS14475 a60e412494c421af65e74b8cb8f8ce2b 339 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 10 334 2.9E-117 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 RMET_RS14475 a60e412494c421af65e74b8cb8f8ce2b 339 Pfam PF00296 Luciferase-like monooxygenase 23 305 1.5E-34 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 SMART SM00448 6 117 2.9E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 SUPERFAMILY SSF46894 135 236 6.24E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 PANTHER PTHR26402:SF292 6 237 1.2E-107 T 22-04-2016 RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 Gene3D G3DSA:1.10.10.10 135 236 4.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 Pfam PF00072 Response regulator receiver domain 8 117 1.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 PANTHER PTHR26402 6 237 1.2E-107 T 22-04-2016 RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 SMART SM00862 158 234 4.4E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 SUPERFAMILY SSF52172 4 125 9.96E-43 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 Gene3D G3DSA:3.40.50.2300 3 125 1.0E-41 T 22-04-2016 RMET_RS09760 1e72ea2e19f96f30da6d5c169e1d284b 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 5.7E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 Gene3D G3DSA:3.40.50.720 20 260 2.6E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 SUPERFAMILY SSF51735 20 261 7.61E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 259 5.3E-31 T 22-04-2016 RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PANTHER PTHR24322:SF211 173 204 3.7E-36 T 22-04-2016 RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PANTHER PTHR24322:SF211 23 157 3.7E-36 T 22-04-2016 RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PANTHER PTHR24322 173 204 3.7E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PANTHER PTHR24322 23 157 3.7E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 9.2E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 9.2E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 9.2E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 9.2E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00925 0ebfdcf9878745597b88a252ff7b0304 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 9.2E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS00840 076b916a4da41b92e088794669550a8c 282 PANTHER PTHR34266 7 277 2.3E-128 T 22-04-2016 RMET_RS00840 076b916a4da41b92e088794669550a8c 282 Hamap MF_00443 Thiazole synthase [thiG]. 12 272 41.042 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RMET_RS00840 076b916a4da41b92e088794669550a8c 282 Pfam PF05690 Thiazole biosynthesis protein ThiG 15 266 2.5E-103 T 22-04-2016 RMET_RS00840 076b916a4da41b92e088794669550a8c 282 Gene3D G3DSA:3.20.20.70 15 275 6.1E-53 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS00840 076b916a4da41b92e088794669550a8c 282 SUPERFAMILY SSF110399 11 258 1.31E-79 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RMET_RS08625 c6d3e987e7aa4d1f2796bd14a75294f3 539 SUPERFAMILY SSF52096 238 518 7.02E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS08625 c6d3e987e7aa4d1f2796bd14a75294f3 539 Gene3D G3DSA:3.90.226.10 278 530 2.2E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS08625 c6d3e987e7aa4d1f2796bd14a75294f3 539 Gene3D G3DSA:3.90.226.10 43 275 3.4E-51 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS08625 c6d3e987e7aa4d1f2796bd14a75294f3 539 PANTHER PTHR22855:SF29 1 539 1.6E-297 T 22-04-2016 RMET_RS08625 c6d3e987e7aa4d1f2796bd14a75294f3 539 Pfam PF01039 Carboxyl transferase domain 49 526 6.5E-117 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS08625 c6d3e987e7aa4d1f2796bd14a75294f3 539 PANTHER PTHR22855 1 539 1.6E-297 T 22-04-2016 RMET_RS08625 c6d3e987e7aa4d1f2796bd14a75294f3 539 SUPERFAMILY SSF52096 32 271 7.18E-53 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS02550 0a602d1b793a3172f889e293f7dea68b 302 Pfam PF01259 SAICAR synthetase 16 262 4.2E-102 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RMET_RS02550 0a602d1b793a3172f889e293f7dea68b 302 PANTHER PTHR11609:SF6 10 298 8.6E-147 T 22-04-2016 RMET_RS02550 0a602d1b793a3172f889e293f7dea68b 302 PANTHER PTHR11609 10 298 8.6E-147 T 22-04-2016 RMET_RS02550 0a602d1b793a3172f889e293f7dea68b 302 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 298 1.4E-81 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RMET_RS02550 0a602d1b793a3172f889e293f7dea68b 302 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 298 25.719 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RMET_RS02550 0a602d1b793a3172f889e293f7dea68b 302 Gene3D G3DSA:3.30.470.20 118 248 2.3E-56 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS02550 0a602d1b793a3172f889e293f7dea68b 302 SUPERFAMILY SSF56104 5 299 1.41E-103 T 22-04-2016 RMET_RS02550 0a602d1b793a3172f889e293f7dea68b 302 Gene3D G3DSA:3.30.200.20 5 117 1.1E-42 T 22-04-2016 RMET_RS09740 7a45735f4afdc65f217ed3fed8344f17 419 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 93 306 1.2E-23 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS09740 7a45735f4afdc65f217ed3fed8344f17 419 PANTHER PTHR30469 20 405 3.9E-82 T 22-04-2016 RMET_RS09740 7a45735f4afdc65f217ed3fed8344f17 419 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 79 394 5.3E-72 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS09740 7a45735f4afdc65f217ed3fed8344f17 419 SUPERFAMILY SSF111369 81 309 2.22E-23 T 22-04-2016 RMET_RS09740 7a45735f4afdc65f217ed3fed8344f17 419 Gene3D G3DSA:2.40.50.100 97 125 1.2E-15 T 22-04-2016 RMET_RS09740 7a45735f4afdc65f217ed3fed8344f17 419 Gene3D G3DSA:2.40.50.100 200 231 1.2E-15 T 22-04-2016 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 Gene3D G3DSA:3.50.50.60 338 449 1.1E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 Gene3D G3DSA:3.50.50.60 71 199 1.1E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 PANTHER PTHR10742 314 603 2.4E-36 T 22-04-2016 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 PANTHER PTHR10742 71 273 2.4E-36 T 22-04-2016 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 Pfam PF13450 NAD(P)-binding Rossmann-like domain 77 148 1.4E-13 T 22-04-2016 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 SUPERFAMILY SSF51905 366 427 4.86E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 SUPERFAMILY SSF51905 556 606 4.86E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 SUPERFAMILY SSF51905 318 338 4.86E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 SUPERFAMILY SSF51905 73 231 4.86E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 PANTHER PTHR10742:SF255 314 603 2.4E-36 T 22-04-2016 RMET_RS08050 5555eef544dbffe3a650f8c55db48e0d 610 PANTHER PTHR10742:SF255 71 273 2.4E-36 T 22-04-2016 RMET_RS01975 5cd931e5add5233ddefe8bdb941dbe26 134 SUPERFAMILY SSF54637 18 132 8.1E-34 T 22-04-2016 IPR029069 HotDog domain RMET_RS01975 5cd931e5add5233ddefe8bdb941dbe26 134 Gene3D G3DSA:3.10.129.10 17 132 3.4E-35 T 22-04-2016 IPR029069 HotDog domain RMET_RS01975 5cd931e5add5233ddefe8bdb941dbe26 134 PANTHER PTHR11049:SF5 17 132 1.3E-43 T 22-04-2016 RMET_RS01975 5cd931e5add5233ddefe8bdb941dbe26 134 PANTHER PTHR11049 17 132 1.3E-43 T 22-04-2016 RMET_RS01975 5cd931e5add5233ddefe8bdb941dbe26 134 Pfam PF03061 Thioesterase superfamily 30 102 4.5E-15 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS13165 8b2dc4209605ced7908d32422e651376 306 PANTHER PTHR22911 4 288 5.6E-48 T 22-04-2016 RMET_RS13165 8b2dc4209605ced7908d32422e651376 306 SUPERFAMILY SSF103481 181 280 3.53E-13 T 22-04-2016 RMET_RS13165 8b2dc4209605ced7908d32422e651376 306 PANTHER PTHR22911:SF6 4 288 5.6E-48 T 22-04-2016 RMET_RS13165 8b2dc4209605ced7908d32422e651376 306 Pfam PF00892 EamA-like transporter family 147 273 6.8E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS13165 8b2dc4209605ced7908d32422e651376 306 SUPERFAMILY SSF103481 35 139 3.47E-5 T 22-04-2016 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 386 1.9E-20 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Gene3D G3DSA:3.40.50.300 291 394 5.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 SUPERFAMILY SSF116878 399 475 1.7E-48 T 22-04-2016 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 SUPERFAMILY SSF116878 125 224 1.7E-48 T 22-04-2016 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Gene3D G3DSA:1.20.120.430 252 275 6.6E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Gene3D G3DSA:1.20.120.430 126 186 6.6E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Gene3D G3DSA:1.20.120.430 404 475 6.6E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Pfam PF01926 50S ribosome-binding GTPase 223 345 2.6E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Gene3D G3DSA:3.30.1360.120 5 125 6.6E-43 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 475 32.387 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 124 1.4E-37 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 PANTHER PTHR11649:SF56 9 475 4.9E-157 T 22-04-2016 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 287 3.4E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 243 3.4E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 PANTHER PTHR11649 9 475 4.9E-157 T 22-04-2016 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Gene3D G3DSA:3.40.50.300 215 251 1.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 Pfam PF12631 MnmE helical domain 127 472 5.0E-56 T 22-04-2016 IPR025867 MnmE, helical domain RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 475 6.9E-100 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 SUPERFAMILY SSF52540 73 174 1.35E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS18135 c1d02f3cbab52e88ed4b890c5b2fcf9a 475 SUPERFAMILY SSF52540 208 391 1.35E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01065 f603a820ba9355d748f970307ca118e1 112 Pfam PF11142 Protein of unknown function (DUF2917) 7 65 8.7E-20 T 22-04-2016 IPR021317 Protein of unknown function DUF2917 RMET_RS01065 f603a820ba9355d748f970307ca118e1 112 Gene3D G3DSA:2.60.120.10 23 78 1.5E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS01065 f603a820ba9355d748f970307ca118e1 112 Pfam PF12852 Cupin 21 72 1.2E-5 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain RMET_RS01065 f603a820ba9355d748f970307ca118e1 112 SUPERFAMILY SSF51182 11 80 2.16E-8 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS03590 1d0be59d2f7409c5bd43e5a773cbc1b7 189 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 118 172 7.0E-13 T 22-04-2016 IPR018637 Domain of unknown function DUF2059 RMET_RS15550 81bbd4bfb69d487135e4a69aa00382d5 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15550 81bbd4bfb69d487135e4a69aa00382d5 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.119 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS15550 81bbd4bfb69d487135e4a69aa00382d5 103 SUPERFAMILY SSF141091 1 102 1.96E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RMET_RS15550 81bbd4bfb69d487135e4a69aa00382d5 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.7E-41 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RMET_RS15550 81bbd4bfb69d487135e4a69aa00382d5 103 PANTHER PTHR21349 1 102 8.0E-46 T 22-04-2016 RMET_RS15550 81bbd4bfb69d487135e4a69aa00382d5 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 2.2E-36 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS05235 222f48c62579f98d70671e7e89d6c3d7 244 PANTHER PTHR24220:SF111 24 243 4.2E-107 T 22-04-2016 RMET_RS05235 222f48c62579f98d70671e7e89d6c3d7 244 Gene3D G3DSA:3.40.50.300 25 242 8.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05235 222f48c62579f98d70671e7e89d6c3d7 244 SUPERFAMILY SSF52540 26 242 9.96E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05235 222f48c62579f98d70671e7e89d6c3d7 244 Pfam PF00005 ABC transporter 42 190 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS05235 222f48c62579f98d70671e7e89d6c3d7 244 PANTHER PTHR24220 24 243 4.2E-107 T 22-04-2016 RMET_RS05235 222f48c62579f98d70671e7e89d6c3d7 244 SMART SM00382 51 239 4.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS05235 222f48c62579f98d70671e7e89d6c3d7 244 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS19045 bf28b27bf2d6df1c42f886ea3c09f1b8 381 SUPERFAMILY SSF49899 74 93 8.53E-14 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS19045 bf28b27bf2d6df1c42f886ea3c09f1b8 381 SUPERFAMILY SSF49899 131 289 8.53E-14 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS19045 bf28b27bf2d6df1c42f886ea3c09f1b8 381 Gene3D G3DSA:2.60.120.200 133 240 1.2E-7 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RMET_RS10825 a27cb903f9002a403e9a1fa2d62a674c 115 SUPERFAMILY SSF47413 8 78 2.03E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS10825 a27cb903f9002a403e9a1fa2d62a674c 115 Gene3D G3DSA:1.10.260.40 8 78 7.4E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS10825 a27cb903f9002a403e9a1fa2d62a674c 115 SMART SM00530 13 72 1.4E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS10825 a27cb903f9002a403e9a1fa2d62a674c 115 Pfam PF01381 Helix-turn-helix 14 72 7.8E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS10995 176fbafbf00709002a54ffc5679e5f79 169 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 90 5.0E-38 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RMET_RS10995 176fbafbf00709002a54ffc5679e5f79 169 Gene3D G3DSA:3.30.110.60 6 93 2.8E-26 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RMET_RS10995 176fbafbf00709002a54ffc5679e5f79 169 Pfam PF01985 CRS1 / YhbY (CRM) domain 8 89 2.7E-15 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RMET_RS10995 176fbafbf00709002a54ffc5679e5f79 169 SMART SM01103 6 89 1.6E-38 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RMET_RS10995 176fbafbf00709002a54ffc5679e5f79 169 SUPERFAMILY SSF75471 6 92 6.54E-24 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RMET_RS10995 176fbafbf00709002a54ffc5679e5f79 169 PANTHER PTHR31846 4 90 4.2E-17 T 22-04-2016 RMET_RS05630 1052ba0c13f870fcfacd97abcbacce61 357 Pfam PF04773 FecR protein 132 223 7.4E-24 T 22-04-2016 IPR006860 FecR protein RMET_RS05630 1052ba0c13f870fcfacd97abcbacce61 357 Pfam PF16220 Domain of unknown function (DUF4880) 20 62 1.3E-10 T 22-04-2016 IPR032623 FecR, N-terminal RMET_RS05630 1052ba0c13f870fcfacd97abcbacce61 357 PIRSF PIRSF018266 9 357 8.7E-86 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RMET_RS05630 1052ba0c13f870fcfacd97abcbacce61 357 PANTHER PTHR30273 12 228 3.9E-61 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RMET_RS05630 1052ba0c13f870fcfacd97abcbacce61 357 PANTHER PTHR30273 245 357 3.9E-61 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RMET_RS05630 1052ba0c13f870fcfacd97abcbacce61 357 PANTHER PTHR30273:SF2 12 228 3.9E-61 T 22-04-2016 RMET_RS05630 1052ba0c13f870fcfacd97abcbacce61 357 PANTHER PTHR30273:SF2 245 357 3.9E-61 T 22-04-2016 RMET_RS30655 7879adb3080cf11378be51bd282ce8d5 214 Pfam PF16074 Type IV Pilus-assembly protein W 136 193 6.9E-10 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RMET_RS15610 d0359a294a2bad52fa753f20a08f60b8 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 163.155 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RMET_RS15610 d0359a294a2bad52fa753f20a08f60b8 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 408 1.1E-126 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RMET_RS15610 d0359a294a2bad52fa753f20a08f60b8 408 Pfam PF01960 ArgJ family 23 408 5.8E-147 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RMET_RS15610 d0359a294a2bad52fa753f20a08f60b8 408 SUPERFAMILY SSF56266 16 405 1.31E-139 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RMET_RS15610 d0359a294a2bad52fa753f20a08f60b8 408 Gene3D G3DSA:3.60.70.12 11 279 1.4E-99 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RMET_RS15610 d0359a294a2bad52fa753f20a08f60b8 408 PANTHER PTHR23100:SF0 18 408 2.4E-172 T 22-04-2016 RMET_RS15610 d0359a294a2bad52fa753f20a08f60b8 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 406 0.0 T 22-04-2016 RMET_RS15610 d0359a294a2bad52fa753f20a08f60b8 408 PANTHER PTHR23100 18 408 2.4E-172 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RMET_RS03880 965df44d1e178ead644a5aff9b48de75 270 PANTHER PTHR30043:SF1 21 270 6.7E-109 T 22-04-2016 RMET_RS03880 965df44d1e178ead644a5aff9b48de75 270 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 23 269 3.4E-91 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 RMET_RS03880 965df44d1e178ead644a5aff9b48de75 270 PANTHER PTHR30043 21 270 6.7E-109 T 22-04-2016 RMET_RS03880 965df44d1e178ead644a5aff9b48de75 270 Gene3D G3DSA:1.10.3720.10 74 267 1.2E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03880 965df44d1e178ead644a5aff9b48de75 270 SUPERFAMILY SSF161098 73 259 5.76E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03880 965df44d1e178ead644a5aff9b48de75 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 268 1.2E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11465 c7690e03941ea9fd89ea59d7472c987b 362 PANTHER PTHR30106:SF2 33 357 3.8E-87 T 22-04-2016 RMET_RS11465 c7690e03941ea9fd89ea59d7472c987b 362 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 33 357 4.8E-75 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 RMET_RS11465 c7690e03941ea9fd89ea59d7472c987b 362 Pfam PF03601 Conserved hypothetical protein 698 28 343 6.9E-81 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RMET_RS11465 c7690e03941ea9fd89ea59d7472c987b 362 PANTHER PTHR30106 33 357 3.8E-87 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RMET_RS15290 b0cb0d6a6c3d51c037e6a5f88757a183 294 SUPERFAMILY SSF103481 42 141 5.49E-13 T 22-04-2016 RMET_RS15290 b0cb0d6a6c3d51c037e6a5f88757a183 294 PANTHER PTHR12715 1 293 1.7E-33 T 22-04-2016 RMET_RS15290 b0cb0d6a6c3d51c037e6a5f88757a183 294 SUPERFAMILY SSF103481 185 288 3.53E-9 T 22-04-2016 RMET_RS15290 b0cb0d6a6c3d51c037e6a5f88757a183 294 Pfam PF00892 EamA-like transporter family 152 284 2.7E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS15290 b0cb0d6a6c3d51c037e6a5f88757a183 294 Pfam PF00892 EamA-like transporter family 6 139 1.7E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 SUPERFAMILY SSF51161 4 258 9.84E-75 T 22-04-2016 IPR011004 Trimeric LpxA-like RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 PANTHER PTHR19136:SF52 17 273 2.7E-127 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 70 1.2E-25 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 6.2E-14 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 168 0.0011 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 273 1.4E-146 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 Gene3D G3DSA:2.160.10.10 91 257 1.5E-63 T 22-04-2016 RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 PANTHER PTHR19136 17 273 2.7E-127 T 22-04-2016 RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 Gene3D G3DSA:1.10.166.10 2 70 2.0E-30 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RMET_RS07170 a2a56ed4dc529dff036a27976312dc1c 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 57.202 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RMET_RS13690 c331d0759dff837ab8de1dfc3ec90587 381 PANTHER PTHR12526 25 380 2.0E-43 T 22-04-2016 RMET_RS13690 c331d0759dff837ab8de1dfc3ec90587 381 Pfam PF13579 Glycosyl transferase 4-like domain 26 170 4.5E-13 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RMET_RS13690 c331d0759dff837ab8de1dfc3ec90587 381 PANTHER PTHR12526:SF374 25 380 2.0E-43 T 22-04-2016 RMET_RS13690 c331d0759dff837ab8de1dfc3ec90587 381 Gene3D G3DSA:3.40.50.2000 194 355 5.1E-22 T 22-04-2016 RMET_RS13690 c331d0759dff837ab8de1dfc3ec90587 381 Gene3D G3DSA:3.40.50.2000 64 135 1.6E-4 T 22-04-2016 RMET_RS13690 c331d0759dff837ab8de1dfc3ec90587 381 SUPERFAMILY SSF53756 22 377 1.35E-65 T 22-04-2016 RMET_RS13690 c331d0759dff837ab8de1dfc3ec90587 381 Pfam PF00534 Glycosyl transferases group 1 195 352 9.2E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RMET_RS13395 7625a5ec289220911fbc1a6fc911414b 303 SMART SM00382 57 217 2.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS13395 7625a5ec289220911fbc1a6fc911414b 303 Gene3D G3DSA:3.40.50.300 73 214 1.5E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13395 7625a5ec289220911fbc1a6fc911414b 303 Gene3D G3DSA:3.40.50.300 39 72 3.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13395 7625a5ec289220911fbc1a6fc911414b 303 Gene3D G3DSA:3.40.50.300 219 285 3.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13395 7625a5ec289220911fbc1a6fc911414b 303 PANTHER PTHR37291:SF1 136 303 2.4E-12 T 22-04-2016 RMET_RS13395 7625a5ec289220911fbc1a6fc911414b 303 Pfam PF07728 AAA domain (dynein-related subfamily) 61 207 3.9E-18 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RMET_RS13395 7625a5ec289220911fbc1a6fc911414b 303 SUPERFAMILY SSF52540 43 227 4.97E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13395 7625a5ec289220911fbc1a6fc911414b 303 PANTHER PTHR37291 136 303 2.4E-12 T 22-04-2016 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 Pfam PF07690 Major Facilitator Superfamily 13 236 2.2E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 Pfam PF07690 Major Facilitator Superfamily 246 386 1.2E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 Gene3D G3DSA:1.20.1250.20 8 187 5.4E-29 T 22-04-2016 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 PRINTS PR01035 Tetracycline resistance protein signature 133 155 2.0E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 PRINTS PR01035 Tetracycline resistance protein signature 46 65 2.0E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 PRINTS PR01035 Tetracycline resistance protein signature 77 101 2.0E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 PRINTS PR01035 Tetracycline resistance protein signature 18 34 2.0E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 PRINTS PR01035 Tetracycline resistance protein signature 362 381 2.0E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 Gene3D G3DSA:1.20.1250.20 210 380 1.2E-16 T 22-04-2016 RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 SUPERFAMILY SSF103473 1 381 4.97E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS05605 52a1801ac86127582c4435e3611ab6c9 395 PANTHER PTHR23501 2 381 9.2E-22 T 22-04-2016 RMET_RS03740 c6ef863f75584bbc615d41c149231b63 163 Pfam PF05154 TM2 domain 18 70 3.8E-13 T 22-04-2016 IPR007829 TM2 domain RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 3.7E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 SUPERFAMILY SSF46785 3 76 1.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 Pfam PF07729 FCD domain 82 204 5.5E-23 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 SUPERFAMILY SSF48008 78 210 1.07E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 Gene3D G3DSA:1.20.120.530 75 210 7.6E-31 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 Gene3D G3DSA:1.10.10.10 5 73 5.3E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 SMART SM00345 14 72 3.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 SMART SM00895 82 205 3.0E-18 T 22-04-2016 IPR011711 GntR, C-terminal RMET_RS17310 b376e91f4e93dca163fa6df2d1d3f7a6 230 PANTHER PTHR11751 12 98 1.3E-17 T 22-04-2016 RMET_RS03400 4819575b86c29ddd0bfa54d83beaccd1 437 PANTHER PTHR11662:SF3 16 425 8.3E-159 T 22-04-2016 RMET_RS03400 4819575b86c29ddd0bfa54d83beaccd1 437 PANTHER PTHR11662 16 425 8.3E-159 T 22-04-2016 RMET_RS03400 4819575b86c29ddd0bfa54d83beaccd1 437 Gene3D G3DSA:1.20.1250.20 20 223 7.2E-46 T 22-04-2016 RMET_RS03400 4819575b86c29ddd0bfa54d83beaccd1 437 SUPERFAMILY SSF103473 12 433 1.96E-88 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS03400 4819575b86c29ddd0bfa54d83beaccd1 437 Gene3D G3DSA:1.20.1250.20 240 425 1.2E-22 T 22-04-2016 RMET_RS03400 4819575b86c29ddd0bfa54d83beaccd1 437 Pfam PF07690 Major Facilitator Superfamily 31 393 2.2E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 3.3E-56 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 57 7.4E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 SUPERFAMILY SSF52374 3 157 3.33E-45 T 22-04-2016 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 Pfam PF01467 Cytidylyltransferase-like 5 133 1.1E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.651 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 Gene3D G3DSA:3.40.50.620 2 156 4.1E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 PANTHER PTHR21342:SF1 1 157 1.3E-73 T 22-04-2016 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.7E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.7E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.7E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.7E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.7E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RMET_RS01450 81de134edf4b01a6f4bd3a0e8e39cb7b 161 PANTHER PTHR21342 1 157 1.3E-73 T 22-04-2016 RMET_RS01715 1228a82f934959c72a9b3c30e8304f6d 319 SMART SM00849 33 222 2.7E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS01715 1228a82f934959c72a9b3c30e8304f6d 319 PANTHER PTHR11935:SF5 1 241 3.4E-56 T 22-04-2016 RMET_RS01715 1228a82f934959c72a9b3c30e8304f6d 319 Gene3D G3DSA:3.60.15.10 9 245 4.3E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS01715 1228a82f934959c72a9b3c30e8304f6d 319 SUPERFAMILY SSF56281 14 310 1.54E-58 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS01715 1228a82f934959c72a9b3c30e8304f6d 319 PANTHER PTHR11935 1 241 3.4E-56 T 22-04-2016 RMET_RS01715 1228a82f934959c72a9b3c30e8304f6d 319 Pfam PF00753 Metallo-beta-lactamase superfamily 33 221 9.8E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS01660 2891d72d2731d95ed37cea1dd60583de 397 SUPERFAMILY SSF103473 7 385 2.62E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS01660 2891d72d2731d95ed37cea1dd60583de 397 Gene3D G3DSA:1.20.1250.20 218 386 2.2E-4 T 22-04-2016 RMET_RS01660 2891d72d2731d95ed37cea1dd60583de 397 Gene3D G3DSA:1.20.1250.20 17 178 5.7E-15 T 22-04-2016 RMET_RS01660 2891d72d2731d95ed37cea1dd60583de 397 PANTHER PTHR11360:SF126 1 390 5.6E-79 T 22-04-2016 RMET_RS01660 2891d72d2731d95ed37cea1dd60583de 397 PANTHER PTHR11360 1 390 5.6E-79 T 22-04-2016 RMET_RS01660 2891d72d2731d95ed37cea1dd60583de 397 Pfam PF07690 Major Facilitator Superfamily 18 354 3.1E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS13515 31bf91414bc532df99986dd37de7e7cb 344 PANTHER PTHR24023:SF591 24 338 1.0E-68 T 22-04-2016 RMET_RS13515 31bf91414bc532df99986dd37de7e7cb 344 Gene3D G3DSA:3.40.50.10540 2 302 4.2E-82 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS13515 31bf91414bc532df99986dd37de7e7cb 344 SUPERFAMILY SSF89796 1 334 5.1E-91 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS13515 31bf91414bc532df99986dd37de7e7cb 344 PANTHER PTHR24023 24 338 1.0E-68 T 22-04-2016 RMET_RS13515 31bf91414bc532df99986dd37de7e7cb 344 Pfam PF02515 CoA-transferase family III 5 335 3.5E-75 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS07800 849183b053cf03d432e0c31c73f81a48 354 Pfam PF00437 Type II/IV secretion system protein 27 293 1.9E-77 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS07800 849183b053cf03d432e0c31c73f81a48 354 Gene3D G3DSA:3.40.50.300 134 311 6.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07800 849183b053cf03d432e0c31c73f81a48 354 PANTHER PTHR30258:SF12 24 316 5.3E-87 T 22-04-2016 RMET_RS07800 849183b053cf03d432e0c31c73f81a48 354 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 15 315 3.1E-120 T 22-04-2016 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 RMET_RS07800 849183b053cf03d432e0c31c73f81a48 354 Gene3D G3DSA:3.30.450.90 28 119 8.1E-13 T 22-04-2016 RMET_RS07800 849183b053cf03d432e0c31c73f81a48 354 SUPERFAMILY SSF52540 26 292 2.7E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07800 849183b053cf03d432e0c31c73f81a48 354 PANTHER PTHR30258 24 316 5.3E-87 T 22-04-2016 RMET_RS02780 eacce75335a5789b6a62009e17ca1774 316 SUPERFAMILY SSF52540 92 280 9.97E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02780 eacce75335a5789b6a62009e17ca1774 316 PANTHER PTHR34383:SF1 11 316 3.1E-195 T 22-04-2016 RMET_RS02780 eacce75335a5789b6a62009e17ca1774 316 PANTHER PTHR34383 11 316 3.1E-195 T 22-04-2016 RMET_RS02780 eacce75335a5789b6a62009e17ca1774 316 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 62 287 1.2E-113 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RMET_RS02780 eacce75335a5789b6a62009e17ca1774 316 Gene3D G3DSA:3.40.50.300 60 300 3.8E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02780 eacce75335a5789b6a62009e17ca1774 316 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 61 287 4.2E-115 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 RMET_RS02780 eacce75335a5789b6a62009e17ca1774 316 PIRSF PIRSF028756 33 316 1.0E-135 T 22-04-2016 IPR016898 Polyphosphate kinase 2 RMET_RS07275 4f2e2ff32bfa6c117316afcb48f0af4d 177 Pfam PF03938 Outer membrane protein (OmpH-like) 17 170 2.9E-36 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RMET_RS07275 4f2e2ff32bfa6c117316afcb48f0af4d 177 PIRSF PIRSF002094 7 174 8.9E-50 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RMET_RS07275 4f2e2ff32bfa6c117316afcb48f0af4d 177 SUPERFAMILY SSF111384 30 171 2.62E-35 T 22-04-2016 IPR024930 Skp domain RMET_RS07275 4f2e2ff32bfa6c117316afcb48f0af4d 177 SMART SM00935 19 171 2.7E-59 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RMET_RS07275 4f2e2ff32bfa6c117316afcb48f0af4d 177 PANTHER PTHR35089 9 177 4.1E-38 T 22-04-2016 RMET_RS07275 4f2e2ff32bfa6c117316afcb48f0af4d 177 Gene3D G3DSA:3.30.910.20 106 171 7.7E-33 T 22-04-2016 RMET_RS07275 4f2e2ff32bfa6c117316afcb48f0af4d 177 Gene3D G3DSA:3.30.910.20 20 68 7.7E-33 T 22-04-2016 RMET_RS07275 4f2e2ff32bfa6c117316afcb48f0af4d 177 PANTHER PTHR35089:SF1 9 177 4.1E-38 T 22-04-2016 RMET_RS07680 8193cca74317320a572e73e82400a180 167 PANTHER PTHR24567:SF30 34 144 6.6E-19 T 22-04-2016 RMET_RS07680 8193cca74317320a572e73e82400a180 167 Gene3D G3DSA:2.60.120.10 34 145 1.4E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS07680 8193cca74317320a572e73e82400a180 167 PANTHER PTHR24567 34 144 6.6E-19 T 22-04-2016 RMET_RS07680 8193cca74317320a572e73e82400a180 167 SMART SM00100 14 138 2.6E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RMET_RS07680 8193cca74317320a572e73e82400a180 167 Pfam PF00027 Cyclic nucleotide-binding domain 39 124 3.5E-20 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RMET_RS07680 8193cca74317320a572e73e82400a180 167 SUPERFAMILY SSF51206 35 145 4.06E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RMET_RS14165 662cd5b16d2de56e936a025fc66c4bcc 120 PANTHER PTHR37827 5 120 6.7E-14 T 22-04-2016 RMET_RS13615 9d3ff6ed91427d305915d9acc980a9bb 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 34 450 4.5E-100 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RMET_RS13615 9d3ff6ed91427d305915d9acc980a9bb 493 Pfam PF02321 Outer membrane efflux protein 248 436 1.5E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS13615 9d3ff6ed91427d305915d9acc980a9bb 493 Pfam PF02321 Outer membrane efflux protein 36 223 2.3E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS13615 9d3ff6ed91427d305915d9acc980a9bb 493 PANTHER PTHR30026:SF3 13 462 8.0E-102 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RMET_RS13615 9d3ff6ed91427d305915d9acc980a9bb 493 SUPERFAMILY SSF56954 35 450 2.09E-88 T 22-04-2016 RMET_RS13615 9d3ff6ed91427d305915d9acc980a9bb 493 PANTHER PTHR30026 13 462 8.0E-102 T 22-04-2016 RMET_RS13615 9d3ff6ed91427d305915d9acc980a9bb 493 Gene3D G3DSA:1.20.1600.10 30 443 4.9E-78 T 22-04-2016 RMET_RS00525 3fe94c39b4158ad0c36441709a3680a4 144 PANTHER PTHR30204:SF1 2 126 3.3E-19 T 22-04-2016 RMET_RS00525 3fe94c39b4158ad0c36441709a3680a4 144 PANTHER PTHR30204 2 126 3.3E-19 T 22-04-2016 RMET_RS00525 3fe94c39b4158ad0c36441709a3680a4 144 SMART SM00422 10 80 1.6E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS00525 3fe94c39b4158ad0c36441709a3680a4 144 SUPERFAMILY SSF46955 10 129 9.89E-26 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS00525 3fe94c39b4158ad0c36441709a3680a4 144 Gene3D G3DSA:1.10.1660.10 9 66 3.3E-20 T 22-04-2016 RMET_RS00525 3fe94c39b4158ad0c36441709a3680a4 144 Pfam PF13411 MerR HTH family regulatory protein 10 78 8.5E-15 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RMET_RS00525 3fe94c39b4158ad0c36441709a3680a4 144 Gene3D G3DSA:1.10.1660.10 67 128 4.6E-15 T 22-04-2016 RMET_RS24400 cdd3ac3106688b36f0297c5bb57820ff 158 PANTHER PTHR30294:SF17 27 153 1.1E-45 T 22-04-2016 RMET_RS24400 cdd3ac3106688b36f0297c5bb57820ff 158 PANTHER PTHR30294 27 153 1.1E-45 T 22-04-2016 RMET_RS24400 cdd3ac3106688b36f0297c5bb57820ff 158 Pfam PF12679 ABC-2 family transporter protein 41 156 1.3E-21 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 RMET_RS16255 7b38ca5f5c0da4d04ed72f67dc4a91e0 135 SUPERFAMILY SSF141734 4 111 4.97E-47 T 22-04-2016 RMET_RS16255 7b38ca5f5c0da4d04ed72f67dc4a91e0 135 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 105 1.0E-34 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RMET_RS16255 7b38ca5f5c0da4d04ed72f67dc4a91e0 135 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 109 31.383 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RMET_RS16255 7b38ca5f5c0da4d04ed72f67dc4a91e0 135 PANTHER PTHR21256 1 133 1.3E-59 T 22-04-2016 RMET_RS16255 7b38ca5f5c0da4d04ed72f67dc4a91e0 135 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 107 6.0E-26 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RMET_RS09980 a6cbc81741500982b0c6aae691e62f1d 278 SUPERFAMILY SSF53098 106 272 9.1E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS09980 a6cbc81741500982b0c6aae691e62f1d 278 Pfam PF00665 Integrase core domain 110 229 4.6E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS09980 a6cbc81741500982b0c6aae691e62f1d 278 Pfam PF13276 HTH-like domain 36 96 1.6E-14 T 22-04-2016 IPR025948 HTH-like domain RMET_RS09980 a6cbc81741500982b0c6aae691e62f1d 278 Gene3D G3DSA:3.30.420.10 105 268 4.6E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS12835 a6cbc81741500982b0c6aae691e62f1d 278 SUPERFAMILY SSF53098 106 272 9.1E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS12835 a6cbc81741500982b0c6aae691e62f1d 278 Pfam PF00665 Integrase core domain 110 229 4.6E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS12835 a6cbc81741500982b0c6aae691e62f1d 278 Pfam PF13276 HTH-like domain 36 96 1.6E-14 T 22-04-2016 IPR025948 HTH-like domain RMET_RS12835 a6cbc81741500982b0c6aae691e62f1d 278 Gene3D G3DSA:3.30.420.10 105 268 4.6E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS04440 bc83b79b5853ecfbe616c81f94441b28 173 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 14 170 1.4E-62 T 22-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RMET_RS04440 bc83b79b5853ecfbe616c81f94441b28 173 SUPERFAMILY SSF158694 7 171 2.75E-56 T 22-04-2016 RMET_RS04440 bc83b79b5853ecfbe616c81f94441b28 173 Gene3D G3DSA:1.10.3330.10 13 172 4.7E-62 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RMET_RS04440 bc83b79b5853ecfbe616c81f94441b28 173 Pfam PF09349 OHCU decarboxylase 12 168 7.2E-48 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RMET_RS01280 4b489b7271829c461512d29f6640d475 137 Gene3D G3DSA:3.40.250.10 24 136 1.7E-32 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS01280 4b489b7271829c461512d29f6640d475 137 PANTHER PTHR12231 36 137 1.4E-23 T 22-04-2016 RMET_RS01280 4b489b7271829c461512d29f6640d475 137 SUPERFAMILY SSF52821 32 137 2.62E-34 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS01280 4b489b7271829c461512d29f6640d475 137 PANTHER PTHR12231:SF138 36 137 1.4E-23 T 22-04-2016 RMET_RS01280 4b489b7271829c461512d29f6640d475 137 SMART SM00450 37 134 1.3E-26 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS01280 4b489b7271829c461512d29f6640d475 137 Pfam PF00581 Rhodanese-like domain 42 130 4.1E-18 T 22-04-2016 IPR001763 Rhodanese-like domain RMET_RS13890 f772372c73a915ff416c207f6e683190 211 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 189 209 4.2E-5 T 22-04-2016 RMET_RS13890 f772372c73a915ff416c207f6e683190 211 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 169 188 4.2E-5 T 22-04-2016 RMET_RS13890 f772372c73a915ff416c207f6e683190 211 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 149 4.2E-5 T 22-04-2016 RMET_RS13890 f772372c73a915ff416c207f6e683190 211 Pfam PF13441 YMGG-like Gly-zipper 26 68 7.5E-8 T 22-04-2016 IPR027367 YMGG-like Gly-zipper RMET_RS13890 f772372c73a915ff416c207f6e683190 211 Gene3D G3DSA:3.30.1330.60 94 206 2.7E-43 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS13890 f772372c73a915ff416c207f6e683190 211 PRINTS PR01021 OMPA domain signature 136 151 9.5E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS13890 f772372c73a915ff416c207f6e683190 211 PRINTS PR01021 OMPA domain signature 151 167 9.5E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS13890 f772372c73a915ff416c207f6e683190 211 PRINTS PR01021 OMPA domain signature 106 128 9.5E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS13890 f772372c73a915ff416c207f6e683190 211 PANTHER PTHR30128 2 210 1.4E-52 T 22-04-2016 RMET_RS13890 f772372c73a915ff416c207f6e683190 211 SUPERFAMILY SSF103088 94 208 6.67E-41 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS13890 f772372c73a915ff416c207f6e683190 211 Pfam PF00691 OmpA family 105 200 5.4E-25 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS13890 f772372c73a915ff416c207f6e683190 211 ProSitePatterns PS01068 OmpA-like domain. 138 182 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RMET_RS04970 b103ae42cae79ef7cb5f138bbfb320d5 132 Pfam PF00034 Cytochrome c 29 124 4.6E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS04970 b103ae42cae79ef7cb5f138bbfb320d5 132 SUPERFAMILY SSF46626 5 125 5.28E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS04970 b103ae42cae79ef7cb5f138bbfb320d5 132 Gene3D G3DSA:1.10.760.10 17 125 1.4E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 SMART SM00387 359 467 1.1E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 Gene3D G3DSA:1.10.287.130 249 310 2.6E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 Gene3D G3DSA:3.30.565.10 315 447 4.3E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 314 3.2E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 PANTHER PTHR24423 190 452 7.0E-33 T 22-04-2016 RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 PANTHER PTHR24423 44 70 7.0E-33 T 22-04-2016 RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 SUPERFAMILY SSF55874 304 447 2.62E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 SUPERFAMILY SSF47384 233 315 1.31E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 PANTHER PTHR24423:SF474 190 452 7.0E-33 T 22-04-2016 RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 PANTHER PTHR24423:SF474 44 70 7.0E-33 T 22-04-2016 RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 442 8.4E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15110 0f82c5476447d9294a1d5c3592f6feff 470 SMART SM00388 249 314 4.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS00580 ade70c8258996ebd056a67a3e12d75e3 262 PANTHER PTHR11941 2 259 1.8E-101 T 22-04-2016 RMET_RS00580 ade70c8258996ebd056a67a3e12d75e3 262 Gene3D G3DSA:1.10.12.10 204 261 2.1E-14 T 22-04-2016 IPR014748 Crontonase, C-terminal RMET_RS00580 ade70c8258996ebd056a67a3e12d75e3 262 PANTHER PTHR11941:SF86 2 259 1.8E-101 T 22-04-2016 RMET_RS00580 ade70c8258996ebd056a67a3e12d75e3 262 Gene3D G3DSA:3.90.226.10 2 201 1.2E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS00580 ade70c8258996ebd056a67a3e12d75e3 262 SUPERFAMILY SSF52096 1 261 2.31E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS00580 ade70c8258996ebd056a67a3e12d75e3 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 260 3.1E-54 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 PANTHER PTHR11778:SF0 1 434 1.9E-207 T 22-04-2016 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 SUPERFAMILY SSF46589 1 112 5.23E-32 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 233 408 1.3E-34 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 5.3E-32 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 Gene3D G3DSA:1.10.287.40 1 104 5.8E-28 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 Gene3D G3DSA:3.30.930.10 105 428 1.8E-139 T 22-04-2016 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 PRINTS PR00981 Seryl-tRNA synthetase signature 285 298 9.2E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 PRINTS PR00981 Seryl-tRNA synthetase signature 325 338 9.2E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 PRINTS PR00981 Seryl-tRNA synthetase signature 342 358 9.2E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 PRINTS PR00981 Seryl-tRNA synthetase signature 360 376 9.2E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 PRINTS PR00981 Seryl-tRNA synthetase signature 273 285 9.2E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 PANTHER PTHR11778 1 434 1.9E-207 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 SUPERFAMILY SSF55681 116 428 1.17E-101 T 22-04-2016 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 425 1.3E-160 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 430 38.971 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS03500 a7a9683f89032825114cf9fcef458743 435 PIRSF PIRSF001529 1 434 1.5E-174 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RMET_RS18685 c57fa613612cfe3516fd201653767e8f 72 Pfam PF13500 AAA domain 13 56 7.3E-8 T 22-04-2016 RMET_RS18685 c57fa613612cfe3516fd201653767e8f 72 PANTHER PTHR21343:SF13 13 72 1.5E-15 T 22-04-2016 RMET_RS18685 c57fa613612cfe3516fd201653767e8f 72 PANTHER PTHR21343 13 72 1.5E-15 T 22-04-2016 RMET_RS18685 c57fa613612cfe3516fd201653767e8f 72 Gene3D G3DSA:3.40.50.300 11 71 6.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS18685 c57fa613612cfe3516fd201653767e8f 72 SUPERFAMILY SSF52540 12 69 6.33E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05780 995350411b7a2cb68bd5204be6055114 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 427 6.7E-100 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RMET_RS05780 995350411b7a2cb68bd5204be6055114 432 PIRSF PIRSF006066 1 432 3.2E-118 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 RMET_RS05780 995350411b7a2cb68bd5204be6055114 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 420 9.5E-94 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RMET_RS05780 995350411b7a2cb68bd5204be6055114 432 PANTHER PTHR33362 1 432 1.1E-93 T 22-04-2016 RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 SMART SM00490 524 621 1.7E-9 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 Gene3D G3DSA:3.40.50.300 222 405 7.5E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 Gene3D G3DSA:3.40.50.300 439 460 1.2E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 Gene3D G3DSA:3.40.50.300 525 664 1.2E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 SUPERFAMILY SSF52540 238 388 7.34E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 SUPERFAMILY SSF52540 418 472 7.34E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 SUPERFAMILY SSF52540 535 631 7.34E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 TIGRFAM TIGR00595 priA: primosomal protein N' 244 762 4.2E-176 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 Pfam PF00271 Helicase conserved C-terminal domain 525 621 2.3E-8 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 SMART SM00487 219 419 2.1E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 Pfam PF00270 DEAD/DEAH box helicase 227 386 2.1E-13 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 PANTHER PTHR30580 14 764 4.1E-216 T 22-04-2016 RMET_RS17540 f325227134fcc73103c0a463c3fa7dd0 764 Hamap MF_00983 Probable primosomal protein N' [priA]. 26 764 23.324 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RMET_RS08520 a913c49a4e9cb1eb7b9e7d6825d5ad8c 84 Gene3D G3DSA:3.30.70.330 4 31 3.5E-4 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RMET_RS08520 a913c49a4e9cb1eb7b9e7d6825d5ad8c 84 SUPERFAMILY SSF54928 4 27 3.47E-5 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 PANTHER PTHR14911:SF13 269 336 9.6E-50 T 22-04-2016 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 PANTHER PTHR14911:SF13 354 402 9.6E-50 T 22-04-2016 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 PANTHER PTHR14911:SF13 5 226 9.6E-50 T 22-04-2016 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 Gene3D G3DSA:3.40.50.150 269 405 6.6E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 Gene3D G3DSA:3.40.50.150 158 228 6.6E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 SUPERFAMILY SSF53335 152 231 5.35E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 SUPERFAMILY SSF53335 272 404 5.35E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 SMART SM00981 67 165 4.3E-22 T 22-04-2016 IPR004114 THUMP domain GO:0003723 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 Pfam PF02926 THUMP domain 44 164 6.3E-12 T 22-04-2016 IPR004114 THUMP domain GO:0003723 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 Pfam PF01170 Putative RNA methylase family UPF0020 173 403 6.7E-40 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 PANTHER PTHR14911 269 336 9.6E-50 T 22-04-2016 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 PANTHER PTHR14911 354 402 9.6E-50 T 22-04-2016 RMET_RS14875 1b41a46e31e3b94bfb7cbd91f4e25bc7 419 PANTHER PTHR14911 5 226 9.6E-50 T 22-04-2016 RMET_RS10435 b3206ee54504b395f1f41958e304d0da 148 PANTHER PTHR39966 1 125 2.3E-14 T 22-04-2016 RMET_RS10435 b3206ee54504b395f1f41958e304d0da 148 Pfam PF01814 Hemerythrin HHE cation binding domain 4 126 7.3E-23 T 22-04-2016 IPR012312 Haemerythrin-like RMET_RS10435 b3206ee54504b395f1f41958e304d0da 148 Gene3D G3DSA:1.20.120.520 5 130 5.9E-20 T 22-04-2016 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 Gene3D G3DSA:1.20.1080.10 3 167 2.4E-26 T 22-04-2016 IPR023271 Aquaporin-like RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 PRINTS PR00783 Major intrinsic protein family signature 130 148 5.9E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.9E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.9E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 PRINTS PR00783 Major intrinsic protein family signature 197 217 5.9E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 PRINTS PR00783 Major intrinsic protein family signature 8 27 5.9E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 PANTHER PTHR19139 1 177 2.1E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 SUPERFAMILY SSF81338 3 221 1.31E-37 T 22-04-2016 IPR023271 Aquaporin-like RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 Pfam PF00230 Major intrinsic protein 2 145 7.1E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 Pfam PF00230 Major intrinsic protein 165 219 6.1E-5 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RMET_RS17785 d7311680f9be05f28b51b152a21c515f 243 Gene3D G3DSA:1.20.1080.10 168 227 2.5E-5 T 22-04-2016 IPR023271 Aquaporin-like RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 Pfam PF01546 Peptidase family M20/M25/M40 79 408 6.0E-37 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 PIRSF PIRSF001235 3 415 4.8E-129 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 PANTHER PTHR32494:SF6 6 416 1.9E-180 T 22-04-2016 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 PANTHER PTHR32494 6 416 1.9E-180 T 22-04-2016 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 SUPERFAMILY SSF55031 212 316 3.74E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 Gene3D G3DSA:3.30.70.360 225 332 5.6E-38 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 Gene3D G3DSA:3.40.630.10 354 412 6.1E-113 T 22-04-2016 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 Gene3D G3DSA:3.40.630.10 3 224 6.1E-113 T 22-04-2016 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 9 409 1.6E-123 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 SUPERFAMILY SSF53187 2 222 7.43E-94 T 22-04-2016 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 SUPERFAMILY SSF53187 339 410 7.43E-94 T 22-04-2016 RMET_RS08160 288158e22417bd3af07528d5ba0c5198 418 Pfam PF07687 Peptidase dimerisation domain 209 311 5.3E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS12980 a44bf32bb66ad51eb436437974ed0848 535 PANTHER PTHR22953 18 205 6.9E-125 T 22-04-2016 RMET_RS12980 a44bf32bb66ad51eb436437974ed0848 535 PANTHER PTHR22953 234 399 6.9E-125 T 22-04-2016 RMET_RS12980 a44bf32bb66ad51eb436437974ed0848 535 Pfam PF09423 PhoD-like phosphatase 164 517 7.4E-80 T 22-04-2016 IPR018946 Alkaline phosphatase D-related RMET_RS12980 a44bf32bb66ad51eb436437974ed0848 535 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 55 130 6.3E-16 T 22-04-2016 IPR032093 Phospholipase D, N-terminal RMET_RS12980 a44bf32bb66ad51eb436437974ed0848 535 PANTHER PTHR22953:SF40 18 205 6.9E-125 T 22-04-2016 RMET_RS12980 a44bf32bb66ad51eb436437974ed0848 535 PANTHER PTHR22953:SF40 234 399 6.9E-125 T 22-04-2016 RMET_RS12980 a44bf32bb66ad51eb436437974ed0848 535 SUPERFAMILY SSF56300 151 531 2.92E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS12980 a44bf32bb66ad51eb436437974ed0848 535 Gene3D G3DSA:3.60.21.10 150 531 1.3E-26 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS14365 c0c9e29a874fc72c49572a3d9212c5e2 384 PANTHER PTHR30482 12 377 3.4E-109 T 22-04-2016 RMET_RS14365 c0c9e29a874fc72c49572a3d9212c5e2 384 PANTHER PTHR30482:SF10 12 377 3.4E-109 T 22-04-2016 RMET_RS14365 c0c9e29a874fc72c49572a3d9212c5e2 384 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 356 4.7E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 SUPERFAMILY SSF52540 16 190 1.27E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 13 191 34.402 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 SMART SM00072 13 187 2.4E-5 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 PANTHER PTHR23117:SF8 16 191 4.5E-58 T 22-04-2016 RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 16 190 1.3E-64 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 PANTHER PTHR23117 16 191 4.5E-58 T 22-04-2016 RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 Gene3D G3DSA:3.40.50.300 16 72 2.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 Gene3D G3DSA:3.40.50.300 85 160 2.4E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03865 43069b51e4213018b4fb13281e4ac174 195 Pfam PF13238 AAA domain 19 149 1.1E-8 T 22-04-2016 RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 3.8E-39 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 Gene3D G3DSA:3.40.50.1770 199 368 2.5E-40 T 22-04-2016 RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 SMART SM01002 145 314 2.8E-86 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 SUPERFAMILY SSF51735 136 318 1.89E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 SUPERFAMILY SSF52283 1 167 6.63E-49 T 22-04-2016 RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 Gene3D G3DSA:3.40.50.720 168 198 2.0E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 PANTHER PTHR10160 1 372 1.4E-169 T 22-04-2016 RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 Gene3D G3DSA:3.40.50.1770 1 167 5.0E-54 T 22-04-2016 RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 SMART SM01003 4 136 8.7E-62 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RMET_RS14855 2caef41ffd9bce80a932190d8c576e41 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 370 6.8E-75 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 SUPERFAMILY SSF53067 3 122 1.23E-29 T 22-04-2016 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.5E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.5E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.5E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 264 273 3.5E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.5E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.5E-51 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 314 3.7E-132 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 63.732 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 SUPERFAMILY SSF53067 101 310 2.78E-43 T 22-04-2016 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 307 3.6E-114 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 Gene3D G3DSA:3.30.420.40 1 159 8.5E-48 T 22-04-2016 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 Pfam PF00814 Glycoprotease family 24 308 1.9E-97 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 PANTHER PTHR11735 1 338 4.4E-151 T 22-04-2016 RMET_RS13130 7e734b10fa0881e9cb1212ff154a3fe7 346 PANTHER PTHR11735:SF6 1 338 4.4E-151 T 22-04-2016 RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 269 362 1.6E-21 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 Gene3D G3DSA:3.30.1220.10 249 363 2.5E-34 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 SUPERFAMILY SSF90002 269 362 2.09E-25 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 SMART SM00833 269 362 2.7E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 SUPERFAMILY SSF52540 5 206 3.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 PANTHER PTHR13748:SF43 5 213 6.3E-126 T 22-04-2016 RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 PANTHER PTHR13748:SF43 245 363 6.3E-126 T 22-04-2016 RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 Gene3D G3DSA:3.40.50.300 4 205 5.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 PANTHER PTHR13748 5 213 6.3E-126 T 22-04-2016 RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 PANTHER PTHR13748 245 363 6.3E-126 T 22-04-2016 RMET_RS00650 61eb007b259412779d052344ffb2e39c 363 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 186 2.3E-55 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS06290 8edfde966e44825bf0ffbccade76a17c 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 6.0E-35 T 22-04-2016 IPR007948 Protein of unknown function DUF736 RMET_RS09570 df603a0a92e236110d01ff4df9f3a539 294 Gene3D G3DSA:3.20.20.70 4 292 1.1E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS09570 df603a0a92e236110d01ff4df9f3a539 294 PANTHER PTHR37418:SF2 3 89 4.9E-127 T 22-04-2016 RMET_RS09570 df603a0a92e236110d01ff4df9f3a539 294 PANTHER PTHR37418:SF2 107 294 4.9E-127 T 22-04-2016 RMET_RS09570 df603a0a92e236110d01ff4df9f3a539 294 Pfam PF05853 beta-keto acid cleavage enzyme 5 291 1.6E-96 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 RMET_RS09570 df603a0a92e236110d01ff4df9f3a539 294 PANTHER PTHR37418 3 89 4.9E-127 T 22-04-2016 RMET_RS09570 df603a0a92e236110d01ff4df9f3a539 294 PANTHER PTHR37418 107 294 4.9E-127 T 22-04-2016 RMET_RS03235 869ab9707296231e25a68796abfb8d78 456 Gene3D G3DSA:3.40.50.300 60 89 2.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03235 869ab9707296231e25a68796abfb8d78 456 SUPERFAMILY SSF52540 83 418 2.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03235 869ab9707296231e25a68796abfb8d78 456 Pfam PF00437 Type II/IV secretion system protein 103 378 7.1E-86 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RMET_RS03235 869ab9707296231e25a68796abfb8d78 456 Gene3D G3DSA:3.30.450.90 98 196 2.4E-34 T 22-04-2016 RMET_RS03235 869ab9707296231e25a68796abfb8d78 456 PANTHER PTHR30258:SF3 39 441 1.7E-130 T 22-04-2016 RMET_RS03235 869ab9707296231e25a68796abfb8d78 456 Gene3D G3DSA:3.40.50.300 199 417 6.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03235 869ab9707296231e25a68796abfb8d78 456 PANTHER PTHR30258 39 441 1.7E-130 T 22-04-2016 RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 PANTHER PTHR22953 386 592 4.5E-80 T 22-04-2016 RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 SUPERFAMILY SSF56300 388 416 5.75E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 SUPERFAMILY SSF56300 507 644 5.75E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 SUPERFAMILY SSF56300 155 198 5.75E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 SUPERFAMILY SSF56300 231 343 5.75E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 Pfam PF09423 PhoD-like phosphatase 159 640 5.6E-83 T 22-04-2016 IPR018946 Alkaline phosphatase D-related RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 PANTHER PTHR22953:SF28 233 343 4.5E-80 T 22-04-2016 RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 57 146 2.9E-30 T 22-04-2016 IPR032093 Phospholipase D, N-terminal RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 Gene3D G3DSA:3.60.21.10 385 405 1.0E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 Gene3D G3DSA:3.60.21.10 299 351 1.0E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 Gene3D G3DSA:3.60.21.10 174 196 1.0E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 Gene3D G3DSA:3.60.21.10 228 267 1.0E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 PANTHER PTHR22953:SF28 47 198 4.5E-80 T 22-04-2016 RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 PANTHER PTHR22953:SF28 386 592 4.5E-80 T 22-04-2016 RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 PANTHER PTHR22953 233 343 4.5E-80 T 22-04-2016 RMET_RS13135 278d8cbd6fbf2e13daa5e9577a38431a 679 PANTHER PTHR22953 47 198 4.5E-80 T 22-04-2016 RMET_RS06980 d633d46b3062791808c393a81dd078bf 431 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 248 1.2E-110 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RMET_RS06980 d633d46b3062791808c393a81dd078bf 431 SUPERFAMILY SSF51621 5 425 1.88E-158 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS06980 d633d46b3062791808c393a81dd078bf 431 PIRSF PIRSF001362 1 428 2.5E-239 T 22-04-2016 RMET_RS06980 d633d46b3062791808c393a81dd078bf 431 PANTHER PTHR21631 4 425 8.3E-170 T 22-04-2016 RMET_RS06980 d633d46b3062791808c393a81dd078bf 431 Pfam PF00463 Isocitrate lyase family 13 248 2.8E-60 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RMET_RS06980 d633d46b3062791808c393a81dd078bf 431 Pfam PF00463 Isocitrate lyase family 249 423 5.5E-45 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RMET_RS06980 d633d46b3062791808c393a81dd078bf 431 Gene3D G3DSA:3.20.20.60 5 407 1.7E-164 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS12520 54b95891be356ee1c8755dd6a70aa9d0 299 SUPERFAMILY SSF53335 55 285 1.28E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS12520 54b95891be356ee1c8755dd6a70aa9d0 299 Gene3D G3DSA:3.40.50.150 55 287 7.0E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 351 584 3.4E-69 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 Pfam PF07549 SecD/SecF GG Motif 128 148 8.6E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 PANTHER PTHR30081 1 182 5.8E-173 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 PANTHER PTHR30081 319 600 5.8E-173 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 PANTHER PTHR30081 231 289 5.8E-173 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 Gene3D G3DSA:1.20.1640.10 406 601 9.1E-22 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 Pfam PF02355 Protein export membrane protein 423 595 2.2E-21 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 SUPERFAMILY SSF82866 340 355 2.35E-39 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 SUPERFAMILY SSF82866 401 600 2.35E-39 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 132 591 3.9E-134 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 PANTHER PTHR30081:SF1 1 182 5.8E-173 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 PANTHER PTHR30081:SF1 319 600 5.8E-173 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 PANTHER PTHR30081:SF1 231 289 5.8E-173 T 22-04-2016 RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 Pfam PF13721 SecD export protein N-terminal TM region 1 112 1.1E-34 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain RMET_RS14770 9d3fc3e5f0ad146e911fc4a454104c3a 621 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 607 45.883 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RMET_RS08845 360fcdcd3774e98b382461a43c0dd4cb 460 PANTHER PTHR11999 14 438 3.3E-169 T 22-04-2016 RMET_RS08845 360fcdcd3774e98b382461a43c0dd4cb 460 SUPERFAMILY SSF53383 10 436 4.57E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS08845 360fcdcd3774e98b382461a43c0dd4cb 460 PANTHER PTHR11999:SF99 14 438 3.3E-169 T 22-04-2016 RMET_RS08845 360fcdcd3774e98b382461a43c0dd4cb 460 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 66 367 1.3E-61 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 RMET_RS08845 360fcdcd3774e98b382461a43c0dd4cb 460 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 17 435 5.9E-162 T 22-04-2016 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 RMET_RS08845 360fcdcd3774e98b382461a43c0dd4cb 460 Gene3D G3DSA:3.40.640.10 69 293 1.7E-28 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 Gene3D G3DSA:3.40.50.720 1 162 9.4E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 283 9.7E-37 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 6.3E-50 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 PANTHER PTHR22981 1 292 4.5E-127 T 22-04-2016 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 SUPERFAMILY SSF51735 1 161 8.98E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 PANTHER PTHR22981:SF70 1 292 4.5E-127 T 22-04-2016 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 Gene3D G3DSA:1.10.1040.10 164 288 3.2E-40 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 SUPERFAMILY SSF48179 163 290 6.8E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 289 1.5E-121 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 RMET_RS08210 96a17a2fddd1bae3f3c3730fb5d29678 303 PIRSF PIRSF000103 1 292 9.3E-75 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RMET_RS29645 e8974bebc77856f1da061d9a8696a904 67 Gene3D G3DSA:3.90.226.10 1 66 3.7E-6 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS29645 e8974bebc77856f1da061d9a8696a904 67 SUPERFAMILY SSF52096 1 66 2.05E-8 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS13300 a1a0eca99b4bf515ca46ffd2322c5b7b 180 Pfam PF01625 Peptide methionine sulfoxide reductase 8 159 3.2E-64 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS13300 a1a0eca99b4bf515ca46ffd2322c5b7b 180 Gene3D G3DSA:3.30.1060.10 3 159 2.9E-71 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS13300 a1a0eca99b4bf515ca46ffd2322c5b7b 180 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 159 4.9E-58 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS13300 a1a0eca99b4bf515ca46ffd2322c5b7b 180 SUPERFAMILY SSF55068 3 170 1.83E-73 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS13300 a1a0eca99b4bf515ca46ffd2322c5b7b 180 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 36.246 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RMET_RS13300 a1a0eca99b4bf515ca46ffd2322c5b7b 180 PANTHER PTHR10173:SF34 6 159 1.6E-80 T 22-04-2016 RMET_RS13300 a1a0eca99b4bf515ca46ffd2322c5b7b 180 PANTHER PTHR10173 6 159 1.6E-80 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RMET_RS14885 6ec4f7f65ad079f6572e2dec24445de8 140 PANTHER PTHR40255 1 140 1.0E-41 T 22-04-2016 RMET_RS14885 6ec4f7f65ad079f6572e2dec24445de8 140 PIRSF PIRSF004638 1 140 1.8E-49 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 RMET_RS14885 6ec4f7f65ad079f6572e2dec24445de8 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 3.4E-45 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 RMET_RS12525 17ba8e93cba74f512736059d0d541e11 253 SUPERFAMILY SSF48452 80 200 6.12E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS12525 17ba8e93cba74f512736059d0d541e11 253 Pfam PF14559 Tetratricopeptide repeat 102 160 9.4E-6 T 22-04-2016 RMET_RS12525 17ba8e93cba74f512736059d0d541e11 253 PIRSF PIRSF030959 4 253 4.3E-89 T 22-04-2016 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing RMET_RS12525 17ba8e93cba74f512736059d0d541e11 253 Gene3D G3DSA:1.25.40.10 68 213 1.2E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS02285 97ca47db972af9b684737468a7495589 245 SUPERFAMILY SSF55486 117 240 5.31E-40 T 22-04-2016 RMET_RS02285 97ca47db972af9b684737468a7495589 245 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 132 235 1.8E-33 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RMET_RS02285 97ca47db972af9b684737468a7495589 245 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 96 238 21.332 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RMET_RS02285 97ca47db972af9b684737468a7495589 245 PANTHER PTHR22881 111 240 1.1E-42 T 22-04-2016 RMET_RS02285 97ca47db972af9b684737468a7495589 245 Gene3D G3DSA:3.40.390.30 110 237 1.3E-43 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RMET_RS02285 97ca47db972af9b684737468a7495589 245 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 204 214 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site RMET_RS02285 97ca47db972af9b684737468a7495589 245 Pfam PF02130 Uncharacterized protein family UPF0054 116 233 1.8E-33 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RMET_RS12670 d97ecaa7b68cb95f8772679531d55873 139 Pfam PF01575 MaoC like domain 23 117 9.9E-19 T 22-04-2016 IPR002539 MaoC-like domain RMET_RS12670 d97ecaa7b68cb95f8772679531d55873 139 SUPERFAMILY SSF54637 3 138 8.53E-31 T 22-04-2016 IPR029069 HotDog domain RMET_RS12670 d97ecaa7b68cb95f8772679531d55873 139 PANTHER PTHR13078 1 128 1.0E-12 T 22-04-2016 RMET_RS12670 d97ecaa7b68cb95f8772679531d55873 139 Gene3D G3DSA:3.10.129.10 6 138 1.9E-32 T 22-04-2016 IPR029069 HotDog domain RMET_RS12670 d97ecaa7b68cb95f8772679531d55873 139 PRINTS PR01483 Fatty acid synthase signature 25 47 7.0E-6 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RMET_RS12670 d97ecaa7b68cb95f8772679531d55873 139 PRINTS PR01483 Fatty acid synthase signature 47 68 7.0E-6 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 595 604 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 SUPERFAMILY SSF56762 11 604 2.75E-170 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 Gene3D G3DSA:1.10.645.10 4 141 3.6E-201 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 Gene3D G3DSA:1.10.645.10 186 604 3.6E-201 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 PANTHER PTHR11993:SF22 10 130 2.6E-216 T 22-04-2016 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 PANTHER PTHR11993:SF22 386 611 2.6E-216 T 22-04-2016 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 PANTHER PTHR11993:SF22 201 273 2.6E-216 T 22-04-2016 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 Pfam PF00374 Nickel-dependent hydrogenase 53 604 1.1E-216 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 53 78 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 PANTHER PTHR11993 10 130 2.6E-216 T 22-04-2016 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 PANTHER PTHR11993 386 611 2.6E-216 T 22-04-2016 RMET_RS06535 1363744e5983e50dbd51cb8251c9a270 619 PANTHER PTHR11993 201 273 2.6E-216 T 22-04-2016 RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 Pfam PF03466 LysR substrate binding domain 95 303 3.5E-21 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 SUPERFAMILY SSF46785 2 81 1.09E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.3E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 PANTHER PTHR30118 1 314 8.3E-57 T 22-04-2016 RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 Gene3D G3DSA:1.10.10.10 3 81 4.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 Gene3D G3DSA:3.40.190.10 280 307 1.1E-15 T 22-04-2016 RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 Gene3D G3DSA:3.40.190.10 89 172 1.1E-15 T 22-04-2016 RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 Gene3D G3DSA:3.40.190.10 173 274 6.7E-23 T 22-04-2016 RMET_RS14925 429a41fdc6e5c4cf7e9823e463ea9294 333 SUPERFAMILY SSF53850 89 304 9.95E-32 T 22-04-2016 RMET_RS17675 d5aade537a2859b6e775d0cba13c5753 402 PANTHER PTHR30483 1 402 3.3E-197 T 22-04-2016 RMET_RS17675 d5aade537a2859b6e775d0cba13c5753 402 PANTHER PTHR30483:SF17 1 402 3.3E-197 T 22-04-2016 RMET_RS17675 d5aade537a2859b6e775d0cba13c5753 402 Gene3D G3DSA:3.40.50.2300 159 304 8.6E-21 T 22-04-2016 RMET_RS17675 d5aade537a2859b6e775d0cba13c5753 402 Gene3D G3DSA:3.40.50.2300 27 154 3.8E-33 T 22-04-2016 RMET_RS17675 d5aade537a2859b6e775d0cba13c5753 402 Gene3D G3DSA:3.40.50.2300 305 354 3.8E-33 T 22-04-2016 RMET_RS17675 d5aade537a2859b6e775d0cba13c5753 402 Pfam PF13458 Periplasmic binding protein 30 365 5.0E-93 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS17675 d5aade537a2859b6e775d0cba13c5753 402 SUPERFAMILY SSF53822 30 400 5.3E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS31785 539aa4d9d092386db8ce3b1f09cc1b8e 299 Gene3D G3DSA:3.40.50.300 44 242 3.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS31785 539aa4d9d092386db8ce3b1f09cc1b8e 299 SUPERFAMILY SSF52540 44 256 1.42E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 313 36.98 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 SUPERFAMILY SSF53795 140 306 1.01E-34 T 22-04-2016 RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 Gene3D G3DSA:3.40.1390.20 12 137 7.9E-33 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 Pfam PF02603 HPr Serine kinase N terminus 8 135 7.1E-23 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 Gene3D G3DSA:3.40.50.300 141 312 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 SUPERFAMILY SSF75138 12 137 3.4E-29 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 PANTHER PTHR30305 1 317 1.9E-87 T 22-04-2016 RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 PANTHER PTHR30305:SF1 1 317 1.9E-87 T 22-04-2016 RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 13 309 9.3E-95 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RMET_RS01525 40299b2fdb613ec71b7b2e2ed9aa41a8 323 Pfam PF07475 HPr Serine kinase C-terminal domain 140 305 1.7E-60 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RMET_RS03960 66fcd5043b53f8eae6ec2a6af0c2084b 295 PANTHER PTHR12715:SF5 7 294 5.9E-69 T 22-04-2016 RMET_RS03960 66fcd5043b53f8eae6ec2a6af0c2084b 295 SUPERFAMILY SSF103481 191 293 6.8E-13 T 22-04-2016 RMET_RS03960 66fcd5043b53f8eae6ec2a6af0c2084b 295 PANTHER PTHR12715 7 294 5.9E-69 T 22-04-2016 RMET_RS03960 66fcd5043b53f8eae6ec2a6af0c2084b 295 Pfam PF00892 EamA-like transporter family 156 292 5.9E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS03960 66fcd5043b53f8eae6ec2a6af0c2084b 295 Pfam PF00892 EamA-like transporter family 8 142 1.1E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS03960 66fcd5043b53f8eae6ec2a6af0c2084b 295 SUPERFAMILY SSF103481 42 145 3.79E-12 T 22-04-2016 RMET_RS29940 3f1690d4d6ac9eb75c590e9d68d0dfbe 104 Gene3D G3DSA:3.40.50.2300 76 103 5.5E-5 T 22-04-2016 RMET_RS29940 3f1690d4d6ac9eb75c590e9d68d0dfbe 104 SUPERFAMILY SSF52172 76 103 1.71E-5 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS14565 daa9b5bc9061710f9b667d3d2f1f601c 282 Gene3D G3DSA:1.25.40.10 109 119 7.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS14565 daa9b5bc9061710f9b667d3d2f1f601c 282 Gene3D G3DSA:1.25.40.10 196 264 7.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS14565 daa9b5bc9061710f9b667d3d2f1f601c 282 Pfam PF13371 Tetratricopeptide repeat 200 271 1.9E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS14565 daa9b5bc9061710f9b667d3d2f1f601c 282 PANTHER PTHR31350:SF1 23 280 3.3E-39 T 22-04-2016 RMET_RS14565 daa9b5bc9061710f9b667d3d2f1f601c 282 Pfam PF13369 Transglutaminase-like superfamily 43 198 1.2E-48 T 22-04-2016 IPR032698 Protein SirB1, N-terminal RMET_RS14565 daa9b5bc9061710f9b667d3d2f1f601c 282 PANTHER PTHR31350 23 280 3.3E-39 T 22-04-2016 RMET_RS02775 85fb7c1933647e708247acbd24d066f1 346 Pfam PF01544 CorA-like Mg2+ transporter protein 57 339 1.9E-55 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RMET_RS02775 85fb7c1933647e708247acbd24d066f1 346 PANTHER PTHR21535 121 343 7.2E-27 T 22-04-2016 RMET_RS02775 85fb7c1933647e708247acbd24d066f1 346 Gene3D G3DSA:1.20.58.340 272 344 1.2E-18 T 22-04-2016 RMET_RS02775 85fb7c1933647e708247acbd24d066f1 346 SUPERFAMILY SSF143865 55 279 4.05E-39 T 22-04-2016 RMET_RS02775 85fb7c1933647e708247acbd24d066f1 346 SUPERFAMILY SSF144083 281 343 7.59E-16 T 22-04-2016 RMET_RS02775 85fb7c1933647e708247acbd24d066f1 346 Gene3D G3DSA:1.20.58.340 163 253 3.3E-5 T 22-04-2016 RMET_RS23185 09ab8343df39d2f9e12c9750232d2d4e 327 PANTHER PTHR23023 1 312 5.2E-126 T 22-04-2016 RMET_RS23185 09ab8343df39d2f9e12c9750232d2d4e 327 Gene3D G3DSA:3.50.50.60 180 312 5.0E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS23185 09ab8343df39d2f9e12c9750232d2d4e 327 SUPERFAMILY SSF51905 1 234 9.86E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS23185 09ab8343df39d2f9e12c9750232d2d4e 327 PANTHER PTHR23023:SF30 1 312 5.2E-126 T 22-04-2016 RMET_RS23185 09ab8343df39d2f9e12c9750232d2d4e 327 Pfam PF00743 Flavin-binding monooxygenase-like 2 67 1.1E-6 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 RMET_RS23185 09ab8343df39d2f9e12c9750232d2d4e 327 Gene3D G3DSA:3.50.50.60 1 61 6.3E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS23185 09ab8343df39d2f9e12c9750232d2d4e 327 Gene3D G3DSA:3.50.50.60 117 179 6.3E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS03215 c3a30aa02f5867f43bab7556525ca059 189 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 163 3.2E-37 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN RMET_RS03215 c3a30aa02f5867f43bab7556525ca059 189 PANTHER PTHR37625 12 167 1.6E-46 T 22-04-2016 RMET_RS03215 c3a30aa02f5867f43bab7556525ca059 189 PANTHER PTHR37625:SF1 12 167 1.6E-46 T 22-04-2016 RMET_RS03215 c3a30aa02f5867f43bab7556525ca059 189 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 154 2.2E-26 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN RMET_RS20185 46b5b590fd11d101cd84b0908944dd7a 286 PANTHER PTHR21666:SF221 131 286 3.1E-21 T 22-04-2016 RMET_RS20185 46b5b590fd11d101cd84b0908944dd7a 286 SUPERFAMILY SSF51261 130 286 9.94E-20 T 22-04-2016 IPR011055 Duplicated hybrid motif RMET_RS20185 46b5b590fd11d101cd84b0908944dd7a 286 Gene3D G3DSA:2.70.70.10 237 286 1.1E-6 T 22-04-2016 RMET_RS20185 46b5b590fd11d101cd84b0908944dd7a 286 PANTHER PTHR21666 131 286 3.1E-21 T 22-04-2016 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.0E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.0E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.0E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 PANTHER PTHR30126 1 309 2.5E-136 T 22-04-2016 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 Pfam PF03466 LysR substrate binding domain 89 294 1.3E-44 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 SUPERFAMILY SSF46785 11 112 1.24E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 Gene3D G3DSA:1.10.10.10 1 82 4.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 Gene3D G3DSA:3.40.190.10 92 179 1.0E-22 T 22-04-2016 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 Gene3D G3DSA:3.40.190.10 180 260 9.5E-26 T 22-04-2016 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 SUPERFAMILY SSF53850 92 299 7.25E-43 T 22-04-2016 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.0E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS06950 34a9c3b699a121fda172115cfb73ead7 316 PANTHER PTHR30126:SF6 1 309 2.5E-136 T 22-04-2016 RMET_RS13265 b370ed37ef4982b0a8ac83905b16532e 284 PANTHER PTHR10953:SF159 29 182 8.1E-90 T 22-04-2016 RMET_RS13265 b370ed37ef4982b0a8ac83905b16532e 284 PANTHER PTHR10953:SF159 215 276 8.1E-90 T 22-04-2016 RMET_RS13265 b370ed37ef4982b0a8ac83905b16532e 284 SUPERFAMILY SSF69572 24 281 4.32E-61 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RMET_RS13265 b370ed37ef4982b0a8ac83905b16532e 284 Pfam PF00899 ThiF family 38 277 2.1E-34 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RMET_RS13265 b370ed37ef4982b0a8ac83905b16532e 284 PANTHER PTHR10953 29 182 8.1E-90 T 22-04-2016 RMET_RS13265 b370ed37ef4982b0a8ac83905b16532e 284 PANTHER PTHR10953 215 276 8.1E-90 T 22-04-2016 RMET_RS13265 b370ed37ef4982b0a8ac83905b16532e 284 Gene3D G3DSA:3.40.50.720 20 280 2.3E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08555 bfd1a0b63ac9c8cb4a3958b0b83f4d8c 272 SUPERFAMILY SSF52540 49 237 1.6E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08555 bfd1a0b63ac9c8cb4a3958b0b83f4d8c 272 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 19 244 1.8E-103 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 RMET_RS08555 bfd1a0b63ac9c8cb4a3958b0b83f4d8c 272 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 18 241 1.8E-93 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RMET_RS08555 bfd1a0b63ac9c8cb4a3958b0b83f4d8c 272 PIRSF PIRSF028756 1 272 6.8E-112 T 22-04-2016 IPR016898 Polyphosphate kinase 2 RMET_RS08555 bfd1a0b63ac9c8cb4a3958b0b83f4d8c 272 Gene3D G3DSA:3.40.50.300 10 259 3.7E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08555 bfd1a0b63ac9c8cb4a3958b0b83f4d8c 272 PANTHER PTHR34383 4 272 4.1E-131 T 22-04-2016 RMET_RS08555 bfd1a0b63ac9c8cb4a3958b0b83f4d8c 272 PANTHER PTHR34383:SF1 4 272 4.1E-131 T 22-04-2016 RMET_RS00565 53b9cb1e3d7b6ac6f2e006cb1877ab16 227 SUPERFAMILY SSF56784 9 226 1.65E-51 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00565 53b9cb1e3d7b6ac6f2e006cb1877ab16 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 198 2.2E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RMET_RS00565 53b9cb1e3d7b6ac6f2e006cb1877ab16 227 Gene3D G3DSA:1.10.150.240 25 90 1.3E-14 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RMET_RS00565 53b9cb1e3d7b6ac6f2e006cb1877ab16 227 PANTHER PTHR18901:SF9 2 223 5.5E-54 T 22-04-2016 RMET_RS00565 53b9cb1e3d7b6ac6f2e006cb1877ab16 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 197 6.2E-26 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00565 53b9cb1e3d7b6ac6f2e006cb1877ab16 227 Gene3D G3DSA:3.40.50.1000 96 225 4.7E-43 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00565 53b9cb1e3d7b6ac6f2e006cb1877ab16 227 Gene3D G3DSA:3.40.50.1000 5 24 4.7E-43 T 22-04-2016 IPR023214 HAD-like domain RMET_RS00565 53b9cb1e3d7b6ac6f2e006cb1877ab16 227 PANTHER PTHR18901 2 223 5.5E-54 T 22-04-2016 RMET_RS00345 b3a9af890220786434ae3b90ec8c5a3a 316 Pfam PF06166 Protein of unknown function (DUF979) 6 316 9.7E-130 T 22-04-2016 IPR009323 Protein of unknown function DUF979 RMET_RS14965 f1c1f582a6e31c0952033dcb61e97726 202 SUPERFAMILY SSF52038 103 195 5.36E-24 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RMET_RS14965 f1c1f582a6e31c0952033dcb61e97726 202 Pfam PF01337 Barstar (barnase inhibitor) 107 190 1.9E-26 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RMET_RS14965 f1c1f582a6e31c0952033dcb61e97726 202 Gene3D G3DSA:3.30.370.10 102 195 2.0E-30 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RMET_RS02565 c564c4b6200dd259345c5a17d3ad986e 330 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 208 2.6E-53 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RMET_RS02565 c564c4b6200dd259345c5a17d3ad986e 330 SUPERFAMILY SSF55821 8 209 3.05E-57 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RMET_RS02565 c564c4b6200dd259345c5a17d3ad986e 330 Gene3D G3DSA:3.90.870.10 4 203 3.1E-72 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RMET_RS02565 c564c4b6200dd259345c5a17d3ad986e 330 Pfam PF03481 Putative GTP-binding controlling metal-binding 199 325 5.9E-17 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain RMET_RS02565 c564c4b6200dd259345c5a17d3ad986e 330 Pfam PF01300 Telomere recombination 17 197 1.6E-52 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RMET_RS02565 c564c4b6200dd259345c5a17d3ad986e 330 PANTHER PTHR17490 1 329 4.0E-76 T 22-04-2016 RMET_RS02565 c564c4b6200dd259345c5a17d3ad986e 330 PIRSF PIRSF004930 1 329 7.6E-97 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RMET_RS09085 cb3b3048b3d06e18b20b47d8fa947153 325 PIRSF PIRSF017082 1 324 2.7E-84 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS09085 cb3b3048b3d06e18b20b47d8fa947153 325 SUPERFAMILY SSF53850 116 286 6.73E-13 T 22-04-2016 RMET_RS09085 cb3b3048b3d06e18b20b47d8fa947153 325 PANTHER PTHR30349:SF16 19 290 3.0E-90 T 22-04-2016 RMET_RS09085 cb3b3048b3d06e18b20b47d8fa947153 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 321 4.1E-90 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS09085 cb3b3048b3d06e18b20b47d8fa947153 325 PANTHER PTHR30349 19 290 3.0E-90 T 22-04-2016 RMET_RS08365 adf81a15b1acb064c1e3dedb5c1741cc 232 PANTHER PTHR35528:SF1 9 194 2.9E-41 T 22-04-2016 RMET_RS08365 adf81a15b1acb064c1e3dedb5c1741cc 232 Pfam PF13610 DDE domain 79 212 3.8E-44 T 22-04-2016 IPR032874 DDE domain RMET_RS08365 adf81a15b1acb064c1e3dedb5c1741cc 232 Gene3D G3DSA:3.30.420.10 79 191 6.4E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08365 adf81a15b1acb064c1e3dedb5c1741cc 232 SUPERFAMILY SSF53098 80 192 1.16E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS08365 adf81a15b1acb064c1e3dedb5c1741cc 232 PANTHER PTHR35528 9 194 2.9E-41 T 22-04-2016 RMET_RS00335 87807cd9e8c83115d522d6fceae3dbe2 246 PANTHER PTHR30292 1 246 4.3E-122 T 22-04-2016 RMET_RS00335 87807cd9e8c83115d522d6fceae3dbe2 246 Pfam PF03746 LamB/YcsF family 3 235 6.0E-97 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RMET_RS00335 87807cd9e8c83115d522d6fceae3dbe2 246 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.809 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RMET_RS00335 87807cd9e8c83115d522d6fceae3dbe2 246 SUPERFAMILY SSF88713 1 243 3.04E-96 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RMET_RS00335 87807cd9e8c83115d522d6fceae3dbe2 246 PANTHER PTHR30292:SF0 1 246 4.3E-122 T 22-04-2016 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 171 2.0E-47 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 Gene3D G3DSA:3.40.50.720 3 172 7.8E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 PANTHER PTHR22981:SF70 1 304 1.7E-127 T 22-04-2016 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 SUPERFAMILY SSF51735 5 171 4.66E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 PANTHER PTHR22981 1 304 1.7E-127 T 22-04-2016 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 PIRSF PIRSF000103 1 302 3.0E-73 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 7 302 4.3E-123 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 SUPERFAMILY SSF48179 173 301 4.08E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 174 293 3.1E-37 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 Gene3D G3DSA:1.10.1040.10 174 301 3.6E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS17335 c65b8ba69e64e40e28d4ead5e79779b9 307 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 Gene3D G3DSA:1.10.10.10 8 88 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 Gene3D G3DSA:3.40.190.10 97 182 1.3E-24 T 22-04-2016 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 SUPERFAMILY SSF46785 6 87 1.98E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 PANTHER PTHR30537 3 292 1.1E-82 T 22-04-2016 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 Pfam PF03466 LysR substrate binding domain 94 292 1.7E-33 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 PANTHER PTHR30537:SF26 3 292 1.1E-82 T 22-04-2016 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 SUPERFAMILY SSF53850 93 293 5.07E-34 T 22-04-2016 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS14660 d822824c13d620c439062fc8f48bae48 296 Gene3D G3DSA:3.40.190.10 183 261 6.1E-10 T 22-04-2016 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 Gene3D G3DSA:3.30.9.10 225 315 1.7E-7 T 22-04-2016 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 Gene3D G3DSA:3.30.9.10 86 138 1.7E-7 T 22-04-2016 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 PANTHER PTHR13847:SF207 1 366 6.6E-171 T 22-04-2016 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 Pfam PF01266 FAD dependent oxidoreductase 5 365 8.8E-63 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 SUPERFAMILY SSF51905 4 321 6.91E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 PANTHER PTHR13847 1 366 6.6E-171 T 22-04-2016 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 Gene3D G3DSA:3.50.50.60 326 367 2.1E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 Gene3D G3DSA:3.50.50.60 2 84 2.1E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS05735 fbfbe70b6f0a3448c0d13b01ebf22d4a 368 Gene3D G3DSA:3.50.50.60 139 220 2.1E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08750 072694c4c76e64018f396e44edab4bc0 177 Gene3D G3DSA:3.40.50.300 16 155 6.8E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08750 072694c4c76e64018f396e44edab4bc0 177 SUPERFAMILY SSF52540 18 171 7.65E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08750 072694c4c76e64018f396e44edab4bc0 177 Pfam PF13671 AAA domain 16 158 1.9E-26 T 22-04-2016 RMET_RS03355 49afbdc51bd73d6ecdec2ee0ccfeab35 200 PANTHER PTHR34478 3 200 7.1E-88 T 22-04-2016 RMET_RS03355 49afbdc51bd73d6ecdec2ee0ccfeab35 200 Pfam PF04011 LemA family 14 200 4.1E-66 T 22-04-2016 IPR007156 LemA RMET_RS03355 49afbdc51bd73d6ecdec2ee0ccfeab35 200 PANTHER PTHR34478:SF2 3 200 7.1E-88 T 22-04-2016 RMET_RS03355 49afbdc51bd73d6ecdec2ee0ccfeab35 200 Gene3D G3DSA:1.20.1440.20 21 200 7.5E-64 T 22-04-2016 IPR023353 LemA-like domain RMET_RS03355 49afbdc51bd73d6ecdec2ee0ccfeab35 200 SUPERFAMILY SSF140478 30 187 7.45E-55 T 22-04-2016 IPR023353 LemA-like domain RMET_RS01740 7d53a06943654d411f3d3576d452e43c 298 Gene3D G3DSA:1.10.10.10 13 87 1.6E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS01740 7d53a06943654d411f3d3576d452e43c 298 SUPERFAMILY SSF53697 109 273 3.56E-18 T 22-04-2016 RMET_RS01740 7d53a06943654d411f3d3576d452e43c 298 Pfam PF01418 Helix-turn-helix domain, rpiR family 34 79 6.9E-8 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RMET_RS01740 7d53a06943654d411f3d3576d452e43c 298 Pfam PF01380 SIS domain 146 264 2.3E-10 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RMET_RS01740 7d53a06943654d411f3d3576d452e43c 298 SUPERFAMILY SSF46689 15 88 2.33E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS01740 7d53a06943654d411f3d3576d452e43c 298 PANTHER PTHR30514:SF3 14 268 2.6E-39 T 22-04-2016 RMET_RS01740 7d53a06943654d411f3d3576d452e43c 298 Gene3D G3DSA:3.40.50.10490 115 274 3.7E-13 T 22-04-2016 RMET_RS01740 7d53a06943654d411f3d3576d452e43c 298 PANTHER PTHR30514 14 268 2.6E-39 T 22-04-2016 RMET_RS16080 1c71d1b2c78d42b1e5baeb45429477e4 495 Pfam PF00171 Aldehyde dehydrogenase family 17 473 3.4E-116 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS16080 1c71d1b2c78d42b1e5baeb45429477e4 495 SUPERFAMILY SSF53720 14 484 2.88E-123 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS16080 1c71d1b2c78d42b1e5baeb45429477e4 495 PANTHER PTHR11699:SF144 11 494 5.8E-233 T 22-04-2016 RMET_RS16080 1c71d1b2c78d42b1e5baeb45429477e4 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RMET_RS16080 1c71d1b2c78d42b1e5baeb45429477e4 495 PANTHER PTHR11699 11 494 5.8E-233 T 22-04-2016 RMET_RS16080 1c71d1b2c78d42b1e5baeb45429477e4 495 Gene3D G3DSA:3.40.605.10 17 262 2.4E-69 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS16080 1c71d1b2c78d42b1e5baeb45429477e4 495 Gene3D G3DSA:3.40.309.10 263 442 5.4E-45 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS13540 fbf51e31055dc14bce62f90f6da8139c 355 PANTHER PTHR21666 179 295 5.4E-18 T 22-04-2016 RMET_RS13540 fbf51e31055dc14bce62f90f6da8139c 355 Gene3D G3DSA:1.10.530.10 207 318 6.2E-21 T 22-04-2016 RMET_RS13540 fbf51e31055dc14bce62f90f6da8139c 355 SUPERFAMILY SSF53955 203 320 6.95E-22 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS13540 fbf51e31055dc14bce62f90f6da8139c 355 Pfam PF01464 Transglycosylase SLT domain 209 283 1.3E-14 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RMET_RS13045 4cbb100d82d4c039aae8fb1a27c38d02 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 323 5.1E-87 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS13045 4cbb100d82d4c039aae8fb1a27c38d02 327 PANTHER PTHR30349 8 319 1.1E-88 T 22-04-2016 RMET_RS13045 4cbb100d82d4c039aae8fb1a27c38d02 327 PANTHER PTHR30349:SF32 8 319 1.1E-88 T 22-04-2016 RMET_RS13045 4cbb100d82d4c039aae8fb1a27c38d02 327 Gene3D G3DSA:3.40.190.10 130 228 7.2E-5 T 22-04-2016 RMET_RS13045 4cbb100d82d4c039aae8fb1a27c38d02 327 SUPERFAMILY SSF53850 114 295 5.02E-18 T 22-04-2016 RMET_RS13045 4cbb100d82d4c039aae8fb1a27c38d02 327 PIRSF PIRSF017082 1 326 2.0E-84 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS16315 0106dd9f5815ed32425fe8c0aa31785c 316 Gene3D G3DSA:3.40.50.300 3 224 1.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16315 0106dd9f5815ed32425fe8c0aa31785c 316 SUPERFAMILY SSF52540 3 227 2.77E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16315 0106dd9f5815ed32425fe8c0aa31785c 316 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS16315 0106dd9f5815ed32425fe8c0aa31785c 316 PANTHER PTHR24220 5 223 5.3E-100 T 22-04-2016 RMET_RS16315 0106dd9f5815ed32425fe8c0aa31785c 316 PANTHER PTHR24220:SF305 5 223 5.3E-100 T 22-04-2016 RMET_RS16315 0106dd9f5815ed32425fe8c0aa31785c 316 Pfam PF00005 ABC transporter 19 161 1.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS16315 0106dd9f5815ed32425fe8c0aa31785c 316 SMART SM00382 28 217 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 Gene3D G3DSA:3.40.50.300 230 391 3.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 SMART SM00490 279 360 1.2E-33 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 170 178 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 PANTHER PTHR24031 1 469 7.8E-183 T 22-04-2016 RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 Pfam PF00271 Helicase conserved C-terminal domain 252 360 8.2E-30 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 Pfam PF00270 DEAD/DEAH box helicase 39 213 9.7E-54 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 Gene3D G3DSA:3.40.50.300 4 229 3.8E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 SUPERFAMILY SSF52540 91 378 3.48E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 SMART SM00487 34 239 5.2E-64 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS12975 dcdd12ff3a2711933b8e836ab52d2bc5 498 PANTHER PTHR24031:SF0 1 469 7.8E-183 T 22-04-2016 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 PANTHER PTHR21600:SF25 29 49 4.6E-62 T 22-04-2016 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 PANTHER PTHR21600:SF25 234 604 4.6E-62 T 22-04-2016 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 SUPERFAMILY SSF55174 348 450 1.7E-15 T 22-04-2016 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 PANTHER PTHR21600 29 49 4.6E-62 T 22-04-2016 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 PANTHER PTHR21600 234 604 4.6E-62 T 22-04-2016 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 Gene3D G3DSA:3.10.290.10 358 409 9.1E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 462 604 4.0E-34 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 SUPERFAMILY SSF55120 419 607 3.52E-33 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 SMART SM00363 358 425 1.1E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 Pfam PF00849 RNA pseudouridylate synthase 420 575 1.5E-11 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS07215 ed83b6b3e748880b5bfb90d33f5f0cf0 610 Pfam PF01479 S4 domain 358 404 2.0E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RMET_RS23815 ed3a1ec743e375ca31cb5bad4c2aa95e 216 PANTHER PTHR10617:SF107 1 216 1.2E-94 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RMET_RS23815 ed3a1ec743e375ca31cb5bad4c2aa95e 216 SUPERFAMILY SSF51905 87 215 6.74E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS23815 ed3a1ec743e375ca31cb5bad4c2aa95e 216 PANTHER PTHR10617 1 216 1.2E-94 T 22-04-2016 RMET_RS23815 ed3a1ec743e375ca31cb5bad4c2aa95e 216 Gene3D G3DSA:3.50.50.60 12 60 4.6E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS23815 ed3a1ec743e375ca31cb5bad4c2aa95e 216 Gene3D G3DSA:3.50.50.60 83 214 1.2E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS23815 ed3a1ec743e375ca31cb5bad4c2aa95e 216 SUPERFAMILY SSF54373 2 84 3.53E-32 T 22-04-2016 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 PANTHER PTHR11689:SF14 86 502 3.8E-46 T 22-04-2016 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 SUPERFAMILY SSF81340 77 507 2.09E-87 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 Gene3D G3DSA:1.10.3080.10 95 504 2.0E-66 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 PANTHER PTHR11689 86 502 3.8E-46 T 22-04-2016 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 PRINTS PR00762 Chloride channel signature 411 431 9.9E-21 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 PRINTS PR00762 Chloride channel signature 459 478 9.9E-21 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 PRINTS PR00762 Chloride channel signature 243 262 9.9E-21 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 PRINTS PR00762 Chloride channel signature 441 457 9.9E-21 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 PRINTS PR00762 Chloride channel signature 152 169 9.9E-21 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS16110 596750d77fbe14be71a2834fc375f40d 522 Pfam PF00654 Voltage gated chloride channel 140 491 2.9E-74 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 Gene3D G3DSA:3.40.50.1980 37 254 1.2E-81 T 22-04-2016 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PRINTS PR00083 Histidinol dehydrogenase signature 335 360 4.3E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PRINTS PR00083 Histidinol dehydrogenase signature 376 394 4.3E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PRINTS PR00083 Histidinol dehydrogenase signature 244 265 4.3E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PRINTS PR00083 Histidinol dehydrogenase signature 215 240 4.3E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PRINTS PR00083 Histidinol dehydrogenase signature 151 177 4.3E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PRINTS PR00083 Histidinol dehydrogenase signature 185 211 4.3E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PRINTS PR00083 Histidinol dehydrogenase signature 43 67 4.3E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PRINTS PR00083 Histidinol dehydrogenase signature 266 285 4.3E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PANTHER PTHR21256 11 444 3.6E-201 T 22-04-2016 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 Pfam PF00815 Histidinol dehydrogenase 34 442 4.1E-170 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 244 276 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 44 441 6.8E-162 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 SUPERFAMILY SSF53720 36 442 3.53E-87 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 9 442 42.349 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS16290 1e95a07a1d87d86344bd542c1cb1d93a 444 PIRSF PIRSF000099 10 444 1.1E-160 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 PIRSF PIRSF001456 3 364 1.1E-134 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 SUPERFAMILY SSF103263 4 354 4.58E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 5.1E-141 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 PANTHER PTHR21085 2 357 1.1E-197 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 Gene3D G3DSA:3.60.150.10 9 353 4.1E-153 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.788 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS05725 6882dcfaa40645f0b6c8a5b74955681e 369 Pfam PF01264 Chorismate synthase 10 345 3.1E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 Hamap MF_01393 ATP synthase subunit a [atpB]. 32 289 13.937 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 SUPERFAMILY SSF81336 97 283 2.35E-39 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 PANTHER PTHR11410 143 289 6.7E-72 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 PANTHER PTHR11410 42 123 6.7E-72 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 Gene3D G3DSA:1.20.120.220 100 289 1.5E-48 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 ProSitePatterns PS00449 ATP synthase a subunit signature. 212 221 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 PANTHER PTHR11410:SF7 143 289 6.7E-72 T 22-04-2016 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 PANTHER PTHR11410:SF7 42 123 6.7E-72 T 22-04-2016 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 39 284 9.0E-43 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RMET_RS17590 150b56425b31bea9c2090e4490b44e5c 289 Pfam PF00119 ATP synthase A chain 47 282 4.2E-54 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RMET_RS03905 195c847dd2c5cf245fc25155d4c21208 485 SMART SM00316 37 116 6.9E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 RMET_RS03905 195c847dd2c5cf245fc25155d4c21208 485 PANTHER PTHR30001 1 485 2.6E-191 T 22-04-2016 RMET_RS03905 195c847dd2c5cf245fc25155d4c21208 485 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 2.6E-151 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RMET_RS03905 195c847dd2c5cf245fc25155d4c21208 485 Pfam PF10150 Ribonuclease E/G family 118 389 6.2E-101 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RMET_RS03905 195c847dd2c5cf245fc25155d4c21208 485 Gene3D G3DSA:2.40.50.140 31 122 1.8E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS03905 195c847dd2c5cf245fc25155d4c21208 485 SUPERFAMILY SSF50249 39 122 6.25E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS07190 473088bbc01d210c43b9c66e7e852b11 439 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 290 407 4.5E-10 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RMET_RS07190 473088bbc01d210c43b9c66e7e852b11 439 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 291 414 6.0E-6 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RMET_RS07190 473088bbc01d210c43b9c66e7e852b11 439 Gene3D G3DSA:3.30.1400.10 285 420 4.2E-20 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RMET_RS07190 473088bbc01d210c43b9c66e7e852b11 439 SUPERFAMILY SSF64383 285 421 2.22E-21 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RMET_RS07190 473088bbc01d210c43b9c66e7e852b11 439 SMART SM00771 285 414 5.4E-28 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RMET_RS19185 e1f23efff968192acb7d131375289f45 219 Pfam PF13458 Periplasmic binding protein 13 219 1.4E-48 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS19185 e1f23efff968192acb7d131375289f45 219 Gene3D G3DSA:3.40.50.2300 22 218 1.1E-22 T 22-04-2016 RMET_RS19185 e1f23efff968192acb7d131375289f45 219 SUPERFAMILY SSF53822 20 219 5.05E-30 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS05275 d69006fd86e913cc4e3e12dc031b472f 293 PANTHER PTHR33490 12 289 3.9E-51 T 22-04-2016 RMET_RS05275 d69006fd86e913cc4e3e12dc031b472f 293 SUPERFAMILY SSF54001 125 273 1.25E-34 T 22-04-2016 RMET_RS05275 d69006fd86e913cc4e3e12dc031b472f 293 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 11 87 6.6E-21 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RMET_RS05275 d69006fd86e913cc4e3e12dc031b472f 293 SMART SM00460 183 248 1.2E-11 T 22-04-2016 IPR002931 Transglutaminase-like RMET_RS05275 d69006fd86e913cc4e3e12dc031b472f 293 Gene3D G3DSA:3.90.260.10 181 250 2.3E-8 T 22-04-2016 IPR002931 Transglutaminase-like RMET_RS05275 d69006fd86e913cc4e3e12dc031b472f 293 Pfam PF01841 Transglutaminase-like superfamily 151 245 4.2E-21 T 22-04-2016 IPR002931 Transglutaminase-like RMET_RS05275 d69006fd86e913cc4e3e12dc031b472f 293 PANTHER PTHR33490:SF5 12 289 3.9E-51 T 22-04-2016 RMET_RS10290 e19d061d0fb317992632db0370ca9f94 561 Pfam PF10460 Peptidase M30 196 561 2.0E-193 T 22-04-2016 IPR019501 Peptidase M30, hyicolysin RMET_RS17920 c741b6ac42fe3e6e2be33be055a20536 371 SUPERFAMILY SSF102405 89 296 1.26E-37 T 22-04-2016 RMET_RS17920 c741b6ac42fe3e6e2be33be055a20536 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 79 296 8.3E-74 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RMET_RS17920 c741b6ac42fe3e6e2be33be055a20536 371 Pfam PF02481 DNA recombination-mediator protein A 81 287 2.6E-73 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RMET_RS17920 c741b6ac42fe3e6e2be33be055a20536 371 PANTHER PTHR32039 67 369 3.5E-95 T 22-04-2016 RMET_RS17920 c741b6ac42fe3e6e2be33be055a20536 371 Gene3D G3DSA:3.40.50.450 125 294 1.2E-10 T 22-04-2016 RMET_RS17920 c741b6ac42fe3e6e2be33be055a20536 371 PANTHER PTHR32039:SF8 67 369 3.5E-95 T 22-04-2016 RMET_RS17955 2592b6c5c83fc6cfb56f2b703c6f8127 691 PANTHER PTHR30252:SF3 6 691 0.0 T 22-04-2016 RMET_RS17955 2592b6c5c83fc6cfb56f2b703c6f8127 691 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 1.1E-34 T 22-04-2016 IPR025299 CstA, C-terminal domain RMET_RS17955 2592b6c5c83fc6cfb56f2b703c6f8127 691 Pfam PF02554 Carbon starvation protein CstA 32 408 1.1E-172 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 RMET_RS17955 2592b6c5c83fc6cfb56f2b703c6f8127 691 PANTHER PTHR30252 6 691 0.0 T 22-04-2016 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 PANTHER PTHR21087 7 167 1.5E-59 T 22-04-2016 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 SUPERFAMILY SSF52540 7 169 5.73E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 ProSitePatterns PS01128 Shikimate kinase signature. 61 86 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 Pfam PF01202 Shikimate kinase 14 170 4.8E-51 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 Gene3D G3DSA:3.40.50.300 4 173 5.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 PRINTS PR01100 Shikimate kinase family signature 32 45 3.0E-22 T 22-04-2016 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 PRINTS PR01100 Shikimate kinase family signature 99 116 3.0E-22 T 22-04-2016 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 PRINTS PR01100 Shikimate kinase family signature 60 68 3.0E-22 T 22-04-2016 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 PRINTS PR01100 Shikimate kinase family signature 78 87 3.0E-22 T 22-04-2016 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 PRINTS PR01100 Shikimate kinase family signature 8 23 3.0E-22 T 22-04-2016 RMET_RS16385 25aa84f3929576e1a90da3212a84f219 199 Hamap MF_00109 Shikimate kinase [aroK]. 5 171 29.982 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RMET_RS01365 c34da40b479ae60fdaa7251c029ea024 218 SUPERFAMILY SSF52833 68 213 2.19E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01365 c34da40b479ae60fdaa7251c029ea024 218 Gene3D G3DSA:3.40.30.10 66 213 4.8E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS04940 fab5697f32b1bc0e546a7c9968ca8cfd 328 SUPERFAMILY SSF53850 117 292 2.99E-8 T 22-04-2016 RMET_RS04940 fab5697f32b1bc0e546a7c9968ca8cfd 328 PIRSF PIRSF017082 1 327 1.8E-75 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04940 fab5697f32b1bc0e546a7c9968ca8cfd 328 PANTHER PTHR30349:SF1 1 291 6.2E-87 T 22-04-2016 RMET_RS04940 fab5697f32b1bc0e546a7c9968ca8cfd 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 321 1.5E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS04940 fab5697f32b1bc0e546a7c9968ca8cfd 328 PANTHER PTHR30349 1 291 6.2E-87 T 22-04-2016 RMET_RS17385 c8105701bc00bb5ef831690454a19469 128 PANTHER PTHR40043 1 128 1.5E-26 T 22-04-2016 RMET_RS17385 c8105701bc00bb5ef831690454a19469 128 Pfam PF03994 Domain of Unknown Function (DUF350) 12 63 2.2E-12 T 22-04-2016 IPR007140 Protein of unknown function DUF350 RMET_RS17385 c8105701bc00bb5ef831690454a19469 128 Pfam PF03994 Domain of Unknown Function (DUF350) 75 127 8.6E-10 T 22-04-2016 IPR007140 Protein of unknown function DUF350 RMET_RS17385 c8105701bc00bb5ef831690454a19469 128 PANTHER PTHR40043:SF1 1 128 1.5E-26 T 22-04-2016 RMET_RS13865 75f1e42828951bb29bf571ebf5b1cbb3 217 PANTHER PTHR34227 7 215 1.6E-56 T 22-04-2016 RMET_RS13865 75f1e42828951bb29bf571ebf5b1cbb3 217 SUPERFAMILY SSF89155 25 216 2.22E-52 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS13865 75f1e42828951bb29bf571ebf5b1cbb3 217 Gene3D G3DSA:1.10.3480.10 26 216 2.8E-51 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS13865 75f1e42828951bb29bf571ebf5b1cbb3 217 Pfam PF02613 Nitrate reductase delta subunit 65 184 1.8E-26 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RMET_RS13865 75f1e42828951bb29bf571ebf5b1cbb3 217 PANTHER PTHR34227:SF4 7 215 1.6E-56 T 22-04-2016 RMET_RS00295 39cb973c4540c9e2423ec3e39eb9440b 223 Pfam PF04340 Protein of unknown function, DUF484 2 221 3.6E-34 T 22-04-2016 IPR007435 Protein of unknown function DUF484 RMET_RS00295 39cb973c4540c9e2423ec3e39eb9440b 223 PANTHER PTHR38765 1 221 7.9E-24 T 22-04-2016 RMET_RS11445 b07b453b4030cf134420309e03906a35 108 Pfam PF10636 Hemin uptake protein hemP 76 108 4.1E-13 T 22-04-2016 IPR019600 Hemin uptake protein HemP RMET_RS11445 b07b453b4030cf134420309e03906a35 108 Gene3D G3DSA:2.10.70.10 76 108 3.4E-11 T 22-04-2016 RMET_RS02940 12eb0e42f712c699f39b823a08e38adc 367 PANTHER PTHR21716:SF20 16 358 4.5E-85 T 22-04-2016 RMET_RS02940 12eb0e42f712c699f39b823a08e38adc 367 PANTHER PTHR21716 16 358 4.5E-85 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RMET_RS02940 12eb0e42f712c699f39b823a08e38adc 367 Pfam PF01594 Domain of unknown function DUF20 12 342 1.2E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RMET_RS17790 5570a288845c71babefaaf93f6740c36 576 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 219 546 1.0E-20 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RMET_RS17790 5570a288845c71babefaaf93f6740c36 576 SUPERFAMILY SSF56935 215 576 1.88E-56 T 22-04-2016 RMET_RS17790 5570a288845c71babefaaf93f6740c36 576 Pfam PF02264 LamB porin 238 572 1.0E-28 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RMET_RS17790 5570a288845c71babefaaf93f6740c36 576 Gene3D G3DSA:2.40.170.10 236 576 1.8E-34 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RMET_RS00700 c56ea87611fff47ca9c00f96c5d65a15 162 SUPERFAMILY SSF110087 10 138 6.8E-44 T 22-04-2016 IPR007410 DR1885-like metal-binding protein RMET_RS00700 c56ea87611fff47ca9c00f96c5d65a15 162 Pfam PF04314 Protein of unknown function (DUF461) 33 136 1.0E-36 T 22-04-2016 IPR007410 DR1885-like metal-binding protein RMET_RS00700 c56ea87611fff47ca9c00f96c5d65a15 162 PANTHER PTHR36302 1 159 1.4E-27 T 22-04-2016 RMET_RS00700 c56ea87611fff47ca9c00f96c5d65a15 162 PANTHER PTHR36302:SF1 1 159 1.4E-27 T 22-04-2016 RMET_RS25175 3e117c5a0b8a75db30a28c8368ed315e 231 SUPERFAMILY SSF53756 3 217 3.98E-18 T 22-04-2016 RMET_RS25175 3e117c5a0b8a75db30a28c8368ed315e 231 Pfam PF02684 Lipid-A-disaccharide synthetase 5 221 9.0E-57 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RMET_RS25175 3e117c5a0b8a75db30a28c8368ed315e 231 PANTHER PTHR30372 3 221 3.7E-60 T 22-04-2016 RMET_RS25175 3e117c5a0b8a75db30a28c8368ed315e 231 PANTHER PTHR30372:SF0 3 221 3.7E-60 T 22-04-2016 RMET_RS00965 6579ed2ac31ecef135f1b2f1ce75b368 242 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS00965 6579ed2ac31ecef135f1b2f1ce75b368 242 Pfam PF16074 Type IV Pilus-assembly protein W 161 219 8.0E-10 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RMET_RS17840 8d1ba120e62c7c9a17726e0ae0d2a1fa 138 Gene3D G3DSA:3.10.129.10 20 137 4.0E-39 T 22-04-2016 IPR029069 HotDog domain RMET_RS17840 8d1ba120e62c7c9a17726e0ae0d2a1fa 138 PANTHER PTHR21660 2 138 1.5E-24 T 22-04-2016 RMET_RS17840 8d1ba120e62c7c9a17726e0ae0d2a1fa 138 Pfam PF03061 Thioesterase superfamily 52 128 1.9E-13 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS17840 8d1ba120e62c7c9a17726e0ae0d2a1fa 138 PANTHER PTHR21660:SF7 2 138 1.5E-24 T 22-04-2016 RMET_RS17840 8d1ba120e62c7c9a17726e0ae0d2a1fa 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 136 3.3E-14 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RMET_RS17840 8d1ba120e62c7c9a17726e0ae0d2a1fa 138 SUPERFAMILY SSF54637 19 137 1.5E-27 T 22-04-2016 IPR029069 HotDog domain RMET_RS02855 7476847820dea8dd3f28086841e64776 259 SUPERFAMILY SSF51735 11 258 3.39E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS02855 7476847820dea8dd3f28086841e64776 259 PANTHER PTHR24322 16 195 5.8E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02855 7476847820dea8dd3f28086841e64776 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 256 6.3E-78 T 22-04-2016 RMET_RS02855 7476847820dea8dd3f28086841e64776 259 PIRSF PIRSF000094 7 259 2.8E-83 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RMET_RS02855 7476847820dea8dd3f28086841e64776 259 PANTHER PTHR24322:SF317 16 195 5.8E-47 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RMET_RS02855 7476847820dea8dd3f28086841e64776 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02855 7476847820dea8dd3f28086841e64776 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02855 7476847820dea8dd3f28086841e64776 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02855 7476847820dea8dd3f28086841e64776 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS02855 7476847820dea8dd3f28086841e64776 259 Gene3D G3DSA:3.40.50.720 11 205 4.0E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08190 9224d268e081211efe4d9ab57805443a 354 SUPERFAMILY SSF56935 22 354 2.47E-80 T 22-04-2016 RMET_RS08190 9224d268e081211efe4d9ab57805443a 354 Gene3D G3DSA:2.40.160.10 22 354 2.4E-91 T 22-04-2016 IPR023614 Porin domain RMET_RS08190 9224d268e081211efe4d9ab57805443a 354 Pfam PF13609 Gram-negative porin 8 326 7.5E-52 T 22-04-2016 RMET_RS08190 9224d268e081211efe4d9ab57805443a 354 PRINTS PR00184 Neisseria sp. porin signature 56 81 3.8E-7 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS08190 9224d268e081211efe4d9ab57805443a 354 PRINTS PR00184 Neisseria sp. porin signature 190 207 3.8E-7 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS08190 9224d268e081211efe4d9ab57805443a 354 PRINTS PR00184 Neisseria sp. porin signature 298 322 3.8E-7 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS00180 6abc8ad322bfffad0f432b9a68ff488e 84 PANTHER PTHR33404 1 82 3.7E-20 T 22-04-2016 RMET_RS00180 6abc8ad322bfffad0f432b9a68ff488e 84 Gene3D G3DSA:3.30.1070.10 35 83 1.1E-19 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RMET_RS00180 6abc8ad322bfffad0f432b9a68ff488e 84 SUPERFAMILY SSF55229 35 83 9.02E-14 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RMET_RS00180 6abc8ad322bfffad0f432b9a68ff488e 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 1.2E-28 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RMET_RS00180 6abc8ad322bfffad0f432b9a68ff488e 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 5.4E-25 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RMET_RS00180 6abc8ad322bfffad0f432b9a68ff488e 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.392 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RMET_RS17695 1cd87c45704ffed091bbae0e95883258 306 Pfam PF12146 Serine aminopeptidase, S33 50 281 5.3E-69 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 RMET_RS17695 1cd87c45704ffed091bbae0e95883258 306 Gene3D G3DSA:3.40.50.1820 32 299 2.1E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS17695 1cd87c45704ffed091bbae0e95883258 306 SUPERFAMILY SSF53474 29 300 1.02E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS17695 1cd87c45704ffed091bbae0e95883258 306 PANTHER PTHR11614:SF87 31 306 1.7E-67 T 22-04-2016 RMET_RS17695 1cd87c45704ffed091bbae0e95883258 306 PANTHER PTHR11614 31 306 1.7E-67 T 22-04-2016 RMET_RS17695 1cd87c45704ffed091bbae0e95883258 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 79 94 1.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS17695 1cd87c45704ffed091bbae0e95883258 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 127 140 1.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS17695 1cd87c45704ffed091bbae0e95883258 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 237 251 1.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 Gene3D G3DSA:1.10.760.10 137 217 1.6E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 PANTHER PTHR33751:SF3 52 217 2.8E-49 T 22-04-2016 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 SUPERFAMILY SSF46626 33 119 7.2E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 PIRSF PIRSF000005 1 219 2.5E-63 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 PANTHER PTHR33751 52 217 2.8E-49 T 22-04-2016 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 Gene3D G3DSA:1.10.760.10 57 121 3.6E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 Gene3D G3DSA:1.10.760.10 20 56 1.1E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 SUPERFAMILY SSF46626 131 217 1.08E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 Pfam PF00034 Cytochrome c 37 120 1.0E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16470 f453e009b777ac58d239d2aa18cac974 219 Pfam PF00034 Cytochrome c 136 217 1.3E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS09530 061d6adaa838deece6d46e014eebf74b 209 SUPERFAMILY SSF54001 13 192 3.63E-34 T 22-04-2016 RMET_RS09530 061d6adaa838deece6d46e014eebf74b 209 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 14 189 7.6E-45 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RMET_RS09530 061d6adaa838deece6d46e014eebf74b 209 Gene3D G3DSA:2.30.30.330 13 191 8.1E-35 T 22-04-2016 RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 Gene3D G3DSA:3.40.50.2300 8 128 2.5E-39 T 22-04-2016 RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 SMART SM00862 161 237 3.5E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 SUPERFAMILY SSF52172 8 130 9.11E-41 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 Pfam PF00072 Response regulator receiver domain 12 119 4.7E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 SMART SM00448 9 119 6.4E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 237 2.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 PANTHER PTHR26402:SF292 9 241 1.9E-82 T 22-04-2016 RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 Gene3D G3DSA:1.10.10.10 139 238 6.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 PANTHER PTHR26402 9 241 1.9E-82 T 22-04-2016 RMET_RS17475 535078472106f3ada9a31d388dabd00f 243 SUPERFAMILY SSF46894 143 238 3.12E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS13460 8da475e555c7ef4da28e35b3e8d32da4 155 PANTHER PTHR30455 2 147 6.2E-62 T 22-04-2016 RMET_RS13460 8da475e555c7ef4da28e35b3e8d32da4 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 2.6E-57 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RMET_RS13460 8da475e555c7ef4da28e35b3e8d32da4 155 Pfam PF03477 ATP cone domain 51 136 2.0E-13 T 22-04-2016 IPR005144 ATP-cone domain RMET_RS13460 8da475e555c7ef4da28e35b3e8d32da4 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 83.592 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RMET_RS13460 8da475e555c7ef4da28e35b3e8d32da4 155 PANTHER PTHR30455:SF2 2 147 6.2E-62 T 22-04-2016 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 SUPERFAMILY SSF47240 1 155 7.14E-53 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PRINTS PR00601 Bacterioferritin signature 65 85 3.0E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PRINTS PR00601 Bacterioferritin signature 86 106 3.0E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PRINTS PR00601 Bacterioferritin signature 128 149 3.0E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PRINTS PR00601 Bacterioferritin signature 107 127 3.0E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PRINTS PR00601 Bacterioferritin signature 44 64 3.0E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PRINTS PR00601 Bacterioferritin signature 3 22 3.0E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PRINTS PR00601 Bacterioferritin signature 23 43 3.0E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 Pfam PF00210 Ferritin-like domain 8 143 1.3E-38 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PIRSF PIRSF002560 1 156 3.8E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PANTHER PTHR30295 1 154 1.6E-47 T 22-04-2016 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 Gene3D G3DSA:1.20.1260.10 1 155 9.6E-63 T 22-04-2016 IPR012347 Ferritin-related RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 PANTHER PTHR30295:SF9 1 154 1.6E-47 T 22-04-2016 RMET_RS00990 3793440a37975dad3ef9e29a28d5dec1 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 3.2E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS10490 a42f01502c096d1c600f4525be06d353 189 Pfam PF00156 Phosphoribosyl transferase domain 14 161 1.2E-27 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RMET_RS10490 a42f01502c096d1c600f4525be06d353 189 Gene3D G3DSA:3.40.50.2020 9 167 1.5E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS10490 a42f01502c096d1c600f4525be06d353 189 SUPERFAMILY SSF53271 6 177 1.56E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS11210 19496c100c43826381296f5c52b76f2f 366 SUPERFAMILY SSF52540 21 248 6.13E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11210 19496c100c43826381296f5c52b76f2f 366 SMART SM00382 33 217 4.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS11210 19496c100c43826381296f5c52b76f2f 366 PANTHER PTHR24220:SF123 3 266 7.6E-83 T 22-04-2016 RMET_RS11210 19496c100c43826381296f5c52b76f2f 366 Pfam PF08402 TOBE domain 284 351 6.1E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RMET_RS11210 19496c100c43826381296f5c52b76f2f 366 Gene3D G3DSA:3.40.50.300 18 239 4.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11210 19496c100c43826381296f5c52b76f2f 366 Pfam PF00005 ABC transporter 27 167 8.3E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS11210 19496c100c43826381296f5c52b76f2f 366 PANTHER PTHR24220 3 266 7.6E-83 T 22-04-2016 RMET_RS11210 19496c100c43826381296f5c52b76f2f 366 SUPERFAMILY SSF50331 242 357 4.42E-14 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RMET_RS14435 cfad7fb2dfc0e566c0298cf9eb66ff3e 402 PANTHER PTHR37529 31 392 1.1E-16 T 22-04-2016 RMET_RS14435 cfad7fb2dfc0e566c0298cf9eb66ff3e 402 Gene3D G3DSA:3.90.350.10 293 340 1.6E-4 T 22-04-2016 IPR014736 Transposase, Tn5-like, core RMET_RS14435 cfad7fb2dfc0e566c0298cf9eb66ff3e 402 Pfam PF13006 Insertion element 4 transposase N-terminal 22 116 1.3E-24 T 22-04-2016 IPR024473 Transposase, IS4, N-terminal RMET_RS14435 cfad7fb2dfc0e566c0298cf9eb66ff3e 402 Pfam PF01609 Transposase DDE domain 137 360 2.3E-13 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RMET_RS14435 cfad7fb2dfc0e566c0298cf9eb66ff3e 402 SUPERFAMILY SSF53098 135 374 1.06E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS00785 413eafab7b3885be4261d95ca67a9f64 297 PANTHER PTHR30606:SF5 6 297 2.5E-71 T 22-04-2016 RMET_RS00785 413eafab7b3885be4261d95ca67a9f64 297 PANTHER PTHR30606 6 297 2.5E-71 T 22-04-2016 RMET_RS00785 413eafab7b3885be4261d95ca67a9f64 297 PIRSF PIRSF026649 1 297 2.9E-73 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RMET_RS00785 413eafab7b3885be4261d95ca67a9f64 297 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 287 5.8E-58 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 Pfam PF07730 Histidine kinase 250 317 3.6E-15 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 Pfam PF05227 CHASE3 domain 43 170 3.4E-31 T 22-04-2016 IPR007891 CHASE3 RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 450 4.8E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 Gene3D G3DSA:3.30.565.10 325 450 1.4E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 PANTHER PTHR24421 161 184 3.4E-44 T 22-04-2016 RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 PANTHER PTHR24421 245 461 3.4E-44 T 22-04-2016 RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 SUPERFAMILY SSF55874 323 449 2.49E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 SMART SM00387 355 451 1.7E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 PANTHER PTHR24421:SF1 161 184 3.4E-44 T 22-04-2016 RMET_RS00475 5f7ddf5c803b4e71324d82dda292281f 461 PANTHER PTHR24421:SF1 245 461 3.4E-44 T 22-04-2016 RMET_RS07470 b613b4de772844bf2ae6ba616afca261 263 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 160 247 4.3E-30 T 22-04-2016 IPR018754 Protein of unknown function DUF2285 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 Pfam PF00210 Ferritin-like domain 8 143 4.9E-40 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PIRSF PIRSF002560 1 157 4.8E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PANTHER PTHR30295:SF9 1 158 1.0E-49 T 22-04-2016 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.8E-74 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 SUPERFAMILY SSF47240 1 155 7.32E-55 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 Gene3D G3DSA:1.20.1260.10 1 155 8.1E-66 T 22-04-2016 IPR012347 Ferritin-related RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PANTHER PTHR30295 1 158 1.0E-49 T 22-04-2016 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PRINTS PR00601 Bacterioferritin signature 128 149 2.1E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PRINTS PR00601 Bacterioferritin signature 44 64 2.1E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PRINTS PR00601 Bacterioferritin signature 86 106 2.1E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PRINTS PR00601 Bacterioferritin signature 65 85 2.1E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PRINTS PR00601 Bacterioferritin signature 3 22 2.1E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PRINTS PR00601 Bacterioferritin signature 107 127 2.1E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS01260 f26a9f72c54dd1c197ee3192308f39db 159 PRINTS PR00601 Bacterioferritin signature 23 43 2.1E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RMET_RS02815 e37163a9a8939fd892299205b151a953 80 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 66 5.2E-30 T 22-04-2016 IPR021074 Formate dehydrogenase, delta subunit RMET_RS14125 be0473dd36e1fd0b29e6b8e568b04458 191 Pfam PF06073 Bacterial protein of unknown function (DUF934) 72 178 6.6E-42 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RMET_RS14125 be0473dd36e1fd0b29e6b8e568b04458 191 PIRSF PIRSF030820 1 187 1.8E-56 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RMET_RS26455 a7cf2a6542a3c52b89d9653805c268d2 105 Pfam PF00289 Biotin carboxylase, N-terminal domain 35 104 3.5E-24 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RMET_RS26455 a7cf2a6542a3c52b89d9653805c268d2 105 PANTHER PTHR18866 8 104 1.0E-36 T 22-04-2016 RMET_RS26455 a7cf2a6542a3c52b89d9653805c268d2 105 Gene3D G3DSA:3.40.50.20 35 104 7.9E-28 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS26455 a7cf2a6542a3c52b89d9653805c268d2 105 SUPERFAMILY SSF52440 20 104 2.09E-26 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS02600 03ad8e7d879af0d9bc574158b00d5759 476 PANTHER PTHR30469:SF12 94 439 3.6E-146 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA RMET_RS02600 03ad8e7d879af0d9bc574158b00d5759 476 Pfam PF13533 Biotin-lipoyl like 120 168 6.3E-14 T 22-04-2016 RMET_RS02600 03ad8e7d879af0d9bc574158b00d5759 476 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 95 423 1.5E-69 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS02600 03ad8e7d879af0d9bc574158b00d5759 476 Gene3D G3DSA:2.40.50.100 228 261 3.4E-23 T 22-04-2016 RMET_RS02600 03ad8e7d879af0d9bc574158b00d5759 476 Gene3D G3DSA:2.40.50.100 120 153 3.4E-23 T 22-04-2016 RMET_RS02600 03ad8e7d879af0d9bc574158b00d5759 476 SUPERFAMILY SSF111369 112 345 7.06E-56 T 22-04-2016 RMET_RS02600 03ad8e7d879af0d9bc574158b00d5759 476 PANTHER PTHR30469 94 439 3.6E-146 T 22-04-2016 RMET_RS16810 1f3230d45786a36dc8b5ec1ccebd77ed 414 PIRSF PIRSF036542 2 414 6.5E-180 T 22-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB RMET_RS16810 1f3230d45786a36dc8b5ec1ccebd77ed 414 PANTHER PTHR35793 3 414 2.5E-182 T 22-04-2016 RMET_RS16810 1f3230d45786a36dc8b5ec1ccebd77ed 414 PANTHER PTHR35793:SF2 3 414 2.5E-182 T 22-04-2016 RMET_RS16810 1f3230d45786a36dc8b5ec1ccebd77ed 414 Pfam PF07670 Nucleoside recognition 282 384 3.0E-8 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RMET_RS16810 1f3230d45786a36dc8b5ec1ccebd77ed 414 Pfam PF07670 Nucleoside recognition 51 155 1.1E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RMET_RS01190 bdc516f34cd9c1326f2de3cab50703b0 165 Gene3D G3DSA:3.40.30.10 36 152 1.0E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01190 bdc516f34cd9c1326f2de3cab50703b0 165 SUPERFAMILY SSF52833 36 151 8.46E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01075 860af0cf68d6f8db1427fa2104c226cd 145 Pfam PF01230 HIT domain 16 111 1.7E-24 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS01075 860af0cf68d6f8db1427fa2104c226cd 145 Gene3D G3DSA:3.30.428.10 8 140 8.3E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RMET_RS01075 860af0cf68d6f8db1427fa2104c226cd 145 PANTHER PTHR23089:SF7 1 143 1.4E-37 T 22-04-2016 RMET_RS01075 860af0cf68d6f8db1427fa2104c226cd 145 SUPERFAMILY SSF54197 4 140 5.41E-40 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RMET_RS01075 860af0cf68d6f8db1427fa2104c226cd 145 PANTHER PTHR23089 1 143 1.4E-37 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS01075 860af0cf68d6f8db1427fa2104c226cd 145 PRINTS PR00332 Histidine triad family signature 10 26 4.3E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS01075 860af0cf68d6f8db1427fa2104c226cd 145 PRINTS PR00332 Histidine triad family signature 98 108 4.3E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS01075 860af0cf68d6f8db1427fa2104c226cd 145 PRINTS PR00332 Histidine triad family signature 31 49 4.3E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RMET_RS14035 164ac58f7d259839c03fe45d4664b424 336 PANTHER PTHR30349 26 305 5.4E-97 T 22-04-2016 RMET_RS14035 164ac58f7d259839c03fe45d4664b424 336 SUPERFAMILY SSF53850 122 299 1.81E-15 T 22-04-2016 RMET_RS14035 164ac58f7d259839c03fe45d4664b424 336 PANTHER PTHR30349:SF16 26 305 5.4E-97 T 22-04-2016 RMET_RS14035 164ac58f7d259839c03fe45d4664b424 336 PIRSF PIRSF017082 5 336 2.1E-82 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS14035 164ac58f7d259839c03fe45d4664b424 336 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 331 4.1E-93 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS12605 aa75ac983b36196a7968d05deb4473c6 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 87 3.5E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS12605 aa75ac983b36196a7968d05deb4473c6 214 SUPERFAMILY SSF52833 1 92 1.59E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12605 aa75ac983b36196a7968d05deb4473c6 214 Gene3D G3DSA:3.40.30.10 2 95 3.8E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12605 aa75ac983b36196a7968d05deb4473c6 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 203 9.3E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RMET_RS12605 aa75ac983b36196a7968d05deb4473c6 214 SUPERFAMILY SSF47616 87 210 1.53E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS12605 aa75ac983b36196a7968d05deb4473c6 214 PANTHER PTHR11260:SF157 1 214 8.7E-62 T 22-04-2016 RMET_RS12605 aa75ac983b36196a7968d05deb4473c6 214 Gene3D G3DSA:1.20.1050.10 96 208 1.3E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS12605 aa75ac983b36196a7968d05deb4473c6 214 PANTHER PTHR11260 1 214 8.7E-62 T 22-04-2016 RMET_RS17125 6d837da5b383f5242e8d06865279f9d2 275 SUPERFAMILY SSF88713 6 270 2.67E-68 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RMET_RS17125 6d837da5b383f5242e8d06865279f9d2 275 PANTHER PTHR31609 1 271 6.0E-43 T 22-04-2016 RMET_RS17125 6d837da5b383f5242e8d06865279f9d2 275 Gene3D G3DSA:3.20.20.370 6 270 8.2E-69 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RMET_RS17125 6d837da5b383f5242e8d06865279f9d2 275 TIGRFAM TIGR03473 HpnK: hopanoid biosynthesis associated protein HpnK 5 271 4.2E-129 T 22-04-2016 IPR017836 Hopanoid biosynthesis associated protein HpnK RMET_RS17125 6d837da5b383f5242e8d06865279f9d2 275 Pfam PF04794 YdjC-like protein 7 257 7.6E-58 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PANTHER PTHR24322 151 183 3.8E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PANTHER PTHR24322 11 135 3.8E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 245 8.7E-62 T 22-04-2016 RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 8.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.5E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 SUPERFAMILY SSF51735 5 248 2.84E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RMET_RS16650 0b313ed992bee5001cf06d30fcb7e460 262 Gene3D G3DSA:3.40.50.720 2 254 1.2E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03535 06315fb9a33407201dee1a9a8ef53d5e 158 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 140 3.4E-18 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 RMET_RS03535 06315fb9a33407201dee1a9a8ef53d5e 158 Gene3D G3DSA:3.30.530.20 10 143 1.3E-25 T 22-04-2016 IPR023393 START-like domain RMET_RS03535 06315fb9a33407201dee1a9a8ef53d5e 158 SUPERFAMILY SSF55961 4 144 5.72E-32 T 22-04-2016 RMET_RS11790 726ce2047be6b4e9fbe86f85a8fc80df 230 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 5.9E-96 T 22-04-2016 IPR021548 Protein of unknown function DUF2895 RMET_RS11790 726ce2047be6b4e9fbe86f85a8fc80df 230 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 1.8E-90 T 22-04-2016 IPR021548 Protein of unknown function DUF2895 RMET_RS15900 ee8da68cbeb71464f1456b3b4e795fa0 101 Pfam PF00034 Cytochrome c 24 101 6.0E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15900 ee8da68cbeb71464f1456b3b4e795fa0 101 SUPERFAMILY SSF46626 25 101 8.13E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15900 ee8da68cbeb71464f1456b3b4e795fa0 101 Gene3D G3DSA:1.10.760.10 24 101 2.4E-33 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS15900 ee8da68cbeb71464f1456b3b4e795fa0 101 PRINTS PR00606 Class ID cytochrome C signature 79 89 1.2E-25 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS15900 ee8da68cbeb71464f1456b3b4e795fa0 101 PRINTS PR00606 Class ID cytochrome C signature 41 54 1.2E-25 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS15900 ee8da68cbeb71464f1456b3b4e795fa0 101 PRINTS PR00606 Class ID cytochrome C signature 26 39 1.2E-25 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS15900 ee8da68cbeb71464f1456b3b4e795fa0 101 PRINTS PR00606 Class ID cytochrome C signature 90 100 1.2E-25 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS15900 ee8da68cbeb71464f1456b3b4e795fa0 101 PRINTS PR00606 Class ID cytochrome C signature 64 77 1.2E-25 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS03685 0d4f85f4251cf420992c697625884703 307 Pfam PF00850 Histone deacetylase domain 20 304 1.2E-83 T 22-04-2016 IPR023801 Histone deacetylase domain RMET_RS03685 0d4f85f4251cf420992c697625884703 307 SUPERFAMILY SSF52768 1 306 1.2E-105 T 22-04-2016 RMET_RS03685 0d4f85f4251cf420992c697625884703 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 2.4E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS03685 0d4f85f4251cf420992c697625884703 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 2.4E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS03685 0d4f85f4251cf420992c697625884703 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 2.4E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS03685 0d4f85f4251cf420992c697625884703 307 Gene3D G3DSA:3.40.800.20 3 306 5.4E-108 T 22-04-2016 IPR023801 Histone deacetylase domain RMET_RS03685 0d4f85f4251cf420992c697625884703 307 PANTHER PTHR10625 1 306 6.7E-99 T 22-04-2016 IPR000286 Histone deacetylase superfamily RMET_RS03685 0d4f85f4251cf420992c697625884703 307 PANTHER PTHR10625:SF104 1 306 6.7E-99 T 22-04-2016 RMET_RS14930 7089c08ce48368a720b15b41cbbdc3df 205 SUPERFAMILY SSF50475 5 192 1.96E-43 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS14930 7089c08ce48368a720b15b41cbbdc3df 205 Gene3D G3DSA:2.30.110.10 8 188 2.2E-55 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RMET_RS14930 7089c08ce48368a720b15b41cbbdc3df 205 SMART SM00903 15 167 6.4E-33 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RMET_RS14930 7089c08ce48368a720b15b41cbbdc3df 205 PANTHER PTHR30466 13 186 2.9E-35 T 22-04-2016 RMET_RS14930 7089c08ce48368a720b15b41cbbdc3df 205 PANTHER PTHR30466:SF6 13 186 2.9E-35 T 22-04-2016 RMET_RS14930 7089c08ce48368a720b15b41cbbdc3df 205 Pfam PF01613 Flavin reductase like domain 20 158 2.6E-20 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RMET_RS02515 aea7c11ba63835eab3cfe01eb021c69a 266 Pfam PF03591 AzlC protein 38 175 1.1E-32 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease RMET_RS02515 aea7c11ba63835eab3cfe01eb021c69a 266 PANTHER PTHR34979 6 252 1.2E-22 T 22-04-2016 RMET_RS07585 31dec7b5582fec51cc6a975553e9b785 196 SUPERFAMILY SSF56655 2 182 5.19E-58 T 22-04-2016 RMET_RS07585 31dec7b5582fec51cc6a975553e9b785 196 PANTHER PTHR11556 2 182 6.5E-75 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS07585 31dec7b5582fec51cc6a975553e9b785 196 Gene3D G3DSA:3.30.540.10 2 165 7.4E-67 T 22-04-2016 RMET_RS07585 31dec7b5582fec51cc6a975553e9b785 196 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 2 165 4.7E-54 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07585 31dec7b5582fec51cc6a975553e9b785 196 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 37 63 6.5E-32 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07585 31dec7b5582fec51cc6a975553e9b785 196 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 119 142 6.5E-32 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07585 31dec7b5582fec51cc6a975553e9b785 196 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 150 173 6.5E-32 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 PANTHER PTHR24095 1 563 1.4E-173 T 22-04-2016 RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 SUPERFAMILY SSF56801 9 568 2.49E-148 T 22-04-2016 RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 Gene3D G3DSA:3.40.50.980 44 202 2.3E-38 T 22-04-2016 RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 Gene3D G3DSA:3.30.300.30 460 569 1.9E-32 T 22-04-2016 RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 Gene3D G3DSA:3.40.50.980 203 352 8.1E-28 T 22-04-2016 RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 556 4.5E-22 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 PANTHER PTHR24095:SF117 1 563 1.4E-173 T 22-04-2016 RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 Pfam PF00501 AMP-binding enzyme 43 465 2.5E-86 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS05335 d78e789168bd50503b504f9675c8529a 575 Gene3D G3DSA:2.30.38.10 372 459 8.3E-22 T 22-04-2016 RMET_RS01765 da8278141cf11ac02301021ec7f18c9d 384 Pfam PF12698 ABC-2 family transporter protein 33 376 3.2E-47 T 22-04-2016 RMET_RS01765 da8278141cf11ac02301021ec7f18c9d 384 PANTHER PTHR30294:SF12 12 381 1.7E-104 T 22-04-2016 RMET_RS01765 da8278141cf11ac02301021ec7f18c9d 384 PANTHER PTHR30294 12 381 1.7E-104 T 22-04-2016 RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 SUPERFAMILY SSF75217 1 235 3.6E-95 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 260 108.304 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 Gene3D G3DSA:1.10.1270.20 165 251 8.2E-33 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 PIRSF PIRSF000386 1 253 2.9E-93 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 230 1.1E-91 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 PANTHER PTHR32125:SF1 1 232 7.1E-102 T 22-04-2016 RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 1.5E-59 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 Gene3D G3DSA:3.40.1280.10 1 164 1.3E-61 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RMET_RS03765 f942b33287632e8e8c6536db2e70243a 260 PANTHER PTHR32125 1 232 7.1E-102 T 22-04-2016 RMET_RS15920 a7eb23ee03e8012a881dfa4fe91cafe6 124 Pfam PF04379 Protein of unknown function (DUF525) 17 101 3.8E-35 T 22-04-2016 IPR007474 ApaG domain RMET_RS15920 a7eb23ee03e8012a881dfa4fe91cafe6 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 31.786 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG RMET_RS15920 a7eb23ee03e8012a881dfa4fe91cafe6 124 PANTHER PTHR14289 8 121 2.0E-47 T 22-04-2016 RMET_RS15920 a7eb23ee03e8012a881dfa4fe91cafe6 124 SUPERFAMILY SSF110069 6 124 2.35E-49 T 22-04-2016 IPR007474 ApaG domain RMET_RS15920 a7eb23ee03e8012a881dfa4fe91cafe6 124 Gene3D G3DSA:2.60.40.1470 6 124 4.8E-47 T 22-04-2016 IPR007474 ApaG domain RMET_RS14610 e00cd1d0c77dad108ce269439eea294f 173 PANTHER PTHR20941 1 140 7.7E-54 T 22-04-2016 RMET_RS14610 e00cd1d0c77dad108ce269439eea294f 173 SUPERFAMILY SSF55083 1 141 1.57E-47 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RMET_RS14610 e00cd1d0c77dad108ce269439eea294f 173 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 2.7E-35 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RMET_RS14610 e00cd1d0c77dad108ce269439eea294f 173 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 1.2E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RMET_RS14610 e00cd1d0c77dad108ce269439eea294f 173 Gene3D G3DSA:3.30.70.560 4 143 2.4E-50 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RMET_RS08725 e2f06366b707199c63b8e7c2709db3b5 279 PANTHER PTHR11907 1 276 1.4E-80 T 22-04-2016 RMET_RS08725 e2f06366b707199c63b8e7c2709db3b5 279 PANTHER PTHR11907:SF1 1 276 1.4E-80 T 22-04-2016 RMET_RS08725 e2f06366b707199c63b8e7c2709db3b5 279 SUPERFAMILY SSF56235 2 271 5.02E-31 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS08725 e2f06366b707199c63b8e7c2709db3b5 279 Gene3D G3DSA:3.60.20.10 1 272 1.2E-63 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS08725 e2f06366b707199c63b8e7c2709db3b5 279 Pfam PF13230 Glutamine amidotransferases class-II 28 153 1.5E-14 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 RMET_RS06250 0cae7518f9a124914f20a17accee90e4 116 Pfam PF04002 RadC-like JAB domain 47 116 9.4E-21 T 22-04-2016 IPR025657 RadC-like JAB domain RMET_RS06250 0cae7518f9a124914f20a17accee90e4 116 PANTHER PTHR30471 29 116 1.0E-38 T 22-04-2016 RMET_RS06250 0cae7518f9a124914f20a17accee90e4 116 Gene3D G3DSA:3.40.140.10 45 116 3.7E-23 T 22-04-2016 RMET_RS06250 0cae7518f9a124914f20a17accee90e4 116 PANTHER PTHR30471:SF5 29 116 1.0E-38 T 22-04-2016 RMET_RS11695 3b066f1812579db49123eadb359a017a 199 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 61 164 1.5E-41 T 22-04-2016 IPR022260 Integrating conjugative element protein PilL, PFGI-1 RMET_RS06365 a7884092d3f9d76253ade50e8d7fcdd7 268 SUPERFAMILY SSF52540 67 244 2.73E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06365 a7884092d3f9d76253ade50e8d7fcdd7 268 SMART SM00382 100 237 5.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06365 a7884092d3f9d76253ade50e8d7fcdd7 268 Gene3D G3DSA:3.40.50.300 71 233 8.6E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS06365 a7884092d3f9d76253ade50e8d7fcdd7 268 PANTHER PTHR30050 2 265 8.5E-63 T 22-04-2016 RMET_RS06365 a7884092d3f9d76253ade50e8d7fcdd7 268 PIRSF PIRSF003073 1 256 5.2E-79 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RMET_RS06365 a7884092d3f9d76253ade50e8d7fcdd7 268 Pfam PF01695 IstB-like ATP binding protein 58 233 2.2E-61 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 Gene3D G3DSA:3.90.1150.10 247 350 1.1E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 PIRSF PIRSF000524 1 355 2.7E-70 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 Gene3D G3DSA:3.40.640.10 13 246 1.7E-48 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 355 148.147 T 22-04-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 PANTHER PTHR21152:SF21 2 350 6.6E-93 T 22-04-2016 RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 Pfam PF00266 Aminotransferase class-V 25 345 1.6E-23 T 22-04-2016 IPR000192 Aminotransferase class V domain RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 2 349 1.2E-126 T 22-04-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 SUPERFAMILY SSF53383 2 354 3.16E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS09060 7e3edfdd522aaf808dd17a2af396383b 355 PANTHER PTHR21152 2 350 6.6E-93 T 22-04-2016 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 PANTHER PTHR11632 1 587 0.0 T 22-04-2016 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 Gene3D G3DSA:3.90.700.10 248 354 5.5E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 PIRSF PIRSF000171 3 583 3.7E-44 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 SUPERFAMILY SSF46977 457 592 6.15E-47 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 Gene3D G3DSA:1.20.58.100 451 559 2.8E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 Pfam PF02910 Fumarate reductase flavoprotein C-term 466 591 2.2E-40 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 592 8.6E-284 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 SUPERFAMILY SSF51905 363 436 2.72E-79 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 SUPERFAMILY SSF51905 9 264 2.72E-79 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 394 2.5E-6 T 22-04-2016 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 2.5E-6 T 22-04-2016 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 PANTHER PTHR11632:SF5 1 587 0.0 T 22-04-2016 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 Gene3D G3DSA:3.50.50.60 10 247 5.7E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 Gene3D G3DSA:3.50.50.60 355 431 5.7E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 SUPERFAMILY SSF56425 241 359 4.04E-44 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 Gene3D G3DSA:4.10.80.40 560 592 1.3E-23 T 22-04-2016 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 591 6.2E-244 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RMET_RS12465 9123d8990a148f9a44e5fdd5756d4ed7 592 Pfam PF00890 FAD binding domain 14 409 1.0E-117 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RMET_RS15235 b4d871fe513a2c7ef79d8adbeda85618 751 Pfam PF00899 ThiF family 363 470 8.7E-12 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RMET_RS15235 b4d871fe513a2c7ef79d8adbeda85618 751 Pfam PF14464 Prokaryotic homologs of the JAB domain 626 739 1.8E-13 T 22-04-2016 IPR028090 JAB domain, prokaryotic RMET_RS15235 b4d871fe513a2c7ef79d8adbeda85618 751 Pfam PF14457 Prokaryotic E2 family A 6 164 3.2E-54 T 22-04-2016 IPR032865 Prokaryotic E2 family A RMET_RS15235 b4d871fe513a2c7ef79d8adbeda85618 751 Gene3D G3DSA:3.40.50.720 363 469 8.1E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15235 b4d871fe513a2c7ef79d8adbeda85618 751 SUPERFAMILY SSF69572 364 472 1.2E-10 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RMET_RS13155 90c43b0b92821d9eea14be104dc30d30 102 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 23 77 2.3E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RMET_RS13155 90c43b0b92821d9eea14be104dc30d30 102 SUPERFAMILY SSF116842 18 83 3.53E-19 T 22-04-2016 RMET_RS13155 90c43b0b92821d9eea14be104dc30d30 102 Gene3D G3DSA:1.10.287.1040 20 84 9.3E-26 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RMET_RS13155 90c43b0b92821d9eea14be104dc30d30 102 Pfam PF02609 Exonuclease VII small subunit 24 74 4.0E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RMET_RS13155 90c43b0b92821d9eea14be104dc30d30 102 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 23 64 3.0E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RMET_RS13155 90c43b0b92821d9eea14be104dc30d30 102 PANTHER PTHR34137 11 97 2.1E-20 T 22-04-2016 RMET_RS13155 90c43b0b92821d9eea14be104dc30d30 102 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 23 83 14.553 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RMET_RS00055 3f302bcfba2b594554e277c9a8a7a54d 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 283 2.7E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS00055 3f302bcfba2b594554e277c9a8a7a54d 295 PANTHER PTHR32243:SF18 15 295 2.1E-82 T 22-04-2016 RMET_RS00055 3f302bcfba2b594554e277c9a8a7a54d 295 SUPERFAMILY SSF161098 22 295 4.02E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS00055 3f302bcfba2b594554e277c9a8a7a54d 295 Gene3D G3DSA:1.10.3720.10 18 281 6.7E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS00055 3f302bcfba2b594554e277c9a8a7a54d 295 PANTHER PTHR32243 15 295 2.1E-82 T 22-04-2016 RMET_RS17145 900482def13e624513d3785544c5ee96 256 SUPERFAMILY SSF52096 2 255 1.48E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS17145 900482def13e624513d3785544c5ee96 256 Gene3D G3DSA:3.90.226.10 2 251 2.8E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS17145 900482def13e624513d3785544c5ee96 256 PANTHER PTHR11941 4 254 5.4E-92 T 22-04-2016 RMET_RS17145 900482def13e624513d3785544c5ee96 256 PANTHER PTHR11941:SF85 4 254 5.4E-92 T 22-04-2016 RMET_RS17145 900482def13e624513d3785544c5ee96 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 255 7.9E-61 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS11510 c759f5e68ad87717b1c4f84b47b172b6 559 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 290 1.7E-119 T 22-04-2016 IPR022304 Integrating conjugative element, PFGI-1, ParB RMET_RS11510 c759f5e68ad87717b1c4f84b47b172b6 559 SUPERFAMILY SSF110849 37 140 8.89E-10 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS11510 c759f5e68ad87717b1c4f84b47b172b6 559 Gene3D G3DSA:3.90.1530.10 37 104 8.7E-8 T 22-04-2016 RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 Gene3D G3DSA:3.40.50.150 31 279 6.3E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 49 63 1.8E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 253 273 1.8E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 211 228 1.8E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 230 248 1.8E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 84 104 1.8E-29 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 SUPERFAMILY SSF53335 21 277 5.43E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 PANTHER PTHR13370:SF8 31 278 8.7E-37 T 22-04-2016 RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 Pfam PF01555 DNA methylase 50 268 1.1E-44 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RMET_RS12375 4c88839db2544318f4a80eac0967ef9a 311 PANTHER PTHR13370 31 278 8.7E-37 T 22-04-2016 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 Gene3D G3DSA:3.30.565.10 342 491 5.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 PANTHER PTHR24423:SF474 3 17 3.1E-48 T 22-04-2016 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 PANTHER PTHR24423:SF474 198 490 3.1E-48 T 22-04-2016 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 SUPERFAMILY SSF47384 240 328 5.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 SMART SM00387 382 492 2.0E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 328 2.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 Gene3D G3DSA:1.10.287.130 251 326 2.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 469 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 PANTHER PTHR24423 3 17 3.1E-48 T 22-04-2016 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 PANTHER PTHR24423 198 490 3.1E-48 T 22-04-2016 RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 490 8.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 SUPERFAMILY SSF55874 337 492 2.62E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 Pfam PF08521 Two-component sensor kinase N-terminal 34 177 6.4E-39 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RMET_RS18005 2d3874aad99231349f6c8247962cfb01 495 SMART SM00388 257 330 2.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS15085 dce4068294e3684ef3453f73caa718d7 572 Pfam PF00665 Integrase core domain 186 324 1.9E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS15085 dce4068294e3684ef3453f73caa718d7 572 Pfam PF13518 Helix-turn-helix domain 38 84 2.0E-8 T 22-04-2016 RMET_RS15085 dce4068294e3684ef3453f73caa718d7 572 Gene3D G3DSA:1.10.10.60 106 171 1.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS15085 dce4068294e3684ef3453f73caa718d7 572 SUPERFAMILY SSF53098 183 380 2.88E-20 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS15085 dce4068294e3684ef3453f73caa718d7 572 Pfam PF09299 Mu transposase, C-terminal 405 467 1.3E-12 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal RMET_RS15085 dce4068294e3684ef3453f73caa718d7 572 Gene3D G3DSA:3.30.420.10 188 385 3.1E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS15910 3bf56292941a75d75a0123be11a696cf 382 Gene3D G3DSA:2.40.40.10 195 381 3.4E-59 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RMET_RS15910 3bf56292941a75d75a0123be11a696cf 382 Gene3D G3DSA:2.40.40.10 66 174 6.0E-29 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RMET_RS15910 3bf56292941a75d75a0123be11a696cf 382 Pfam PF03562 MltA specific insert domain 78 284 1.1E-68 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RMET_RS15910 3bf56292941a75d75a0123be11a696cf 382 PANTHER PTHR30124:SF0 119 382 5.8E-101 T 22-04-2016 RMET_RS15910 3bf56292941a75d75a0123be11a696cf 382 PANTHER PTHR30124 119 382 5.8E-101 T 22-04-2016 RMET_RS15910 3bf56292941a75d75a0123be11a696cf 382 SUPERFAMILY SSF50685 67 381 1.4E-126 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RMET_RS15910 3bf56292941a75d75a0123be11a696cf 382 SMART SM00925 152 284 2.1E-73 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RMET_RS15910 3bf56292941a75d75a0123be11a696cf 382 Pfam PF06725 3D domain 305 378 3.9E-24 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 RMET_RS07765 370405955a532669156fe889154c8c28 127 Gene3D G3DSA:3.30.70.900 11 104 2.6E-19 T 22-04-2016 RMET_RS07765 370405955a532669156fe889154c8c28 127 Pfam PF07876 Stress responsive A/B Barrel Domain 11 103 1.8E-11 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel RMET_RS07765 370405955a532669156fe889154c8c28 127 SUPERFAMILY SSF54909 11 105 1.97E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RMET_RS07765 370405955a532669156fe889154c8c28 127 SMART SM00886 11 104 4.6E-15 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel RMET_RS05805 1d0674d678bc3ee5e98dfe49bdc229a0 212 Pfam PF01144 Coenzyme A transferase 7 205 4.6E-39 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS05805 1d0674d678bc3ee5e98dfe49bdc229a0 212 SUPERFAMILY SSF100950 3 211 5.12E-72 T 22-04-2016 RMET_RS05805 1d0674d678bc3ee5e98dfe49bdc229a0 212 PANTHER PTHR13707 2 208 9.8E-129 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS05805 1d0674d678bc3ee5e98dfe49bdc229a0 212 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 RMET_RS05805 1d0674d678bc3ee5e98dfe49bdc229a0 212 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 211 2.6E-97 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RMET_RS05805 1d0674d678bc3ee5e98dfe49bdc229a0 212 Gene3D G3DSA:3.40.810.20 3 211 1.1E-92 T 22-04-2016 RMET_RS05805 1d0674d678bc3ee5e98dfe49bdc229a0 212 SMART SM00882 6 206 6.0E-82 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 Gene3D G3DSA:3.40.50.300 151 280 2.7E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 SMART SM00382 28 230 3.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 SMART SM00382 344 514 2.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 Gene3D G3DSA:3.40.50.300 321 548 8.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 PANTHER PTHR19211:SF45 1 575 1.5E-219 T 22-04-2016 RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 Pfam PF12848 ABC transporter 224 295 2.9E-7 T 22-04-2016 IPR032781 ABC-transporter extension domain RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 Pfam PF16326 ABC transporter C-terminal domain 565 633 2.0E-19 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 Pfam PF00005 ABC transporter 19 185 1.5E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 Pfam PF00005 ABC transporter 337 469 2.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 SUPERFAMILY SSF52540 11 234 1.65E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 PANTHER PTHR19211 1 575 1.5E-219 T 22-04-2016 RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 SUPERFAMILY SSF52540 314 509 1.05E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 Gene3D G3DSA:3.40.50.300 6 103 2.7E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS12650 be924974f15ffacaa89af9561c601d35 641 Gene3D G3DSA:3.40.50.300 104 150 1.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08710 05ac891032a5c4d2d96674f7ce18a90a 451 Gene3D G3DSA:1.50.10.10 149 282 1.0E-4 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RMET_RS08710 05ac891032a5c4d2d96674f7ce18a90a 451 SUPERFAMILY SSF48208 167 340 9.86E-14 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RMET_RS08710 05ac891032a5c4d2d96674f7ce18a90a 451 SUPERFAMILY SSF48208 84 137 9.86E-14 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RMET_RS14030 616f3b4de92650c62a70e2dd005daf66 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 259 2.3E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RMET_RS14030 616f3b4de92650c62a70e2dd005daf66 260 SUPERFAMILY SSF52096 1 259 1.76E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS14030 616f3b4de92650c62a70e2dd005daf66 260 Gene3D G3DSA:3.90.226.10 2 258 5.3E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS14030 616f3b4de92650c62a70e2dd005daf66 260 PANTHER PTHR11941 1 257 7.3E-60 T 22-04-2016 RMET_RS15135 639f1021df079059b855e34a470fa36c 195 Gene3D G3DSA:2.10.109.10 153 192 7.4E-9 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS15135 639f1021df079059b855e34a470fa36c 195 Gene3D G3DSA:2.10.109.10 62 115 7.4E-9 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RMET_RS15135 639f1021df079059b855e34a470fa36c 195 SUPERFAMILY SSF51306 68 190 1.31E-19 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RMET_RS15135 639f1021df079059b855e34a470fa36c 195 Pfam PF10502 Signal peptidase, peptidase S26 46 191 2.3E-54 T 22-04-2016 IPR019533 Peptidase S26 RMET_RS08680 5ebded356918134f9d053918cea48cfe 398 Gene3D G3DSA:2.40.160.10 21 398 1.6E-85 T 22-04-2016 IPR023614 Porin domain RMET_RS08680 5ebded356918134f9d053918cea48cfe 398 SUPERFAMILY SSF56935 21 398 2.29E-73 T 22-04-2016 RMET_RS08680 5ebded356918134f9d053918cea48cfe 398 Pfam PF13609 Gram-negative porin 7 356 1.5E-39 T 22-04-2016 RMET_RS08680 5ebded356918134f9d053918cea48cfe 398 PRINTS PR00184 Neisseria sp. porin signature 66 91 1.6E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS08680 5ebded356918134f9d053918cea48cfe 398 PRINTS PR00184 Neisseria sp. porin signature 329 353 1.6E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS12510 9f3ef0b62352b1dbb470a9b7c57e0892 224 Pfam PF02390 Putative methyltransferase 59 219 1.3E-12 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RMET_RS12510 9f3ef0b62352b1dbb470a9b7c57e0892 224 Gene3D G3DSA:3.40.50.150 58 120 1.9E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS12510 9f3ef0b62352b1dbb470a9b7c57e0892 224 SUPERFAMILY SSF53335 51 222 2.46E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS13455 67ab35ce5802c373bac9f7723b72d6ce 415 PIRSF PIRSF000412 2 415 1.8E-168 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RMET_RS13455 67ab35ce5802c373bac9f7723b72d6ce 415 SUPERFAMILY SSF53383 9 415 7.98E-183 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS13455 67ab35ce5802c373bac9f7723b72d6ce 415 Pfam PF00464 Serine hydroxymethyltransferase 9 384 3.7E-175 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RMET_RS13455 67ab35ce5802c373bac9f7723b72d6ce 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 415 52.96 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RMET_RS13455 67ab35ce5802c373bac9f7723b72d6ce 415 Gene3D G3DSA:3.40.640.10 38 283 1.8E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS13455 67ab35ce5802c373bac9f7723b72d6ce 415 Gene3D G3DSA:3.90.1150.10 284 415 4.3E-59 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS13455 67ab35ce5802c373bac9f7723b72d6ce 415 PANTHER PTHR11680 9 415 4.2E-255 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.9E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.9E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.9E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 9.3E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 PANTHER PTHR11880 1 91 1.6E-54 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 PIRSF PIRSF002144 1 91 8.7E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 Gene3D G3DSA:3.30.860.10 1 90 3.8E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.166 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 SUPERFAMILY SSF54570 3 84 8.63E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RMET_RS16615 21761e09f4b2c2b04939d5a2d790af4b 91 Pfam PF00203 Ribosomal protein S19 3 83 9.6E-37 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RMET_RS04830 cd5f424aaa7e2cf8b7d29805cdb3c63a 101 Pfam PF00699 Urease beta subunit 3 99 1.7E-45 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04830 cd5f424aaa7e2cf8b7d29805cdb3c63a 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.275 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04830 cd5f424aaa7e2cf8b7d29805cdb3c63a 101 SUPERFAMILY SSF51278 1 101 1.57E-48 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04830 cd5f424aaa7e2cf8b7d29805cdb3c63a 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 1.6E-45 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04830 cd5f424aaa7e2cf8b7d29805cdb3c63a 101 PANTHER PTHR33569:SF1 1 101 3.4E-65 T 22-04-2016 RMET_RS04830 cd5f424aaa7e2cf8b7d29805cdb3c63a 101 PANTHER PTHR33569 1 101 3.4E-65 T 22-04-2016 RMET_RS04830 cd5f424aaa7e2cf8b7d29805cdb3c63a 101 Gene3D G3DSA:2.10.150.10 1 100 3.0E-51 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 SUPERFAMILY SSF50129 3 145 4.25E-41 T 22-04-2016 IPR011032 GroES-like RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 92 3.1E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 SUPERFAMILY SSF51735 120 297 2.25E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 Gene3D G3DSA:3.90.180.10 16 133 1.1E-6 T 22-04-2016 IPR011032 GroES-like RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 PANTHER PTHR11695 17 333 7.5E-142 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 PANTHER PTHR11695:SF13 17 333 7.5E-142 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 Gene3D G3DSA:3.40.50.720 134 299 5.5E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 331 3.1E-129 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 Pfam PF00107 Zinc-binding dehydrogenase 165 274 1.9E-13 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RMET_RS15990 0b425f6433cd3ba52ce0a8c612d08f9c 333 SMART SM00829 10 329 1.7E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS10020 045d4432233c76332c83ab20fe9072ca 147 SUPERFAMILY SSF56349 1 135 2.12E-31 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS10020 045d4432233c76332c83ab20fe9072ca 147 Gene3D G3DSA:1.10.443.10 1 134 6.1E-33 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS10020 045d4432233c76332c83ab20fe9072ca 147 Pfam PF00589 Phage integrase family 1 123 1.4E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS10020 045d4432233c76332c83ab20fe9072ca 147 PANTHER PTHR30349:SF20 1 135 1.2E-27 T 22-04-2016 RMET_RS10020 045d4432233c76332c83ab20fe9072ca 147 PANTHER PTHR30349 1 135 1.2E-27 T 22-04-2016 RMET_RS16400 50e9a03eb1c8c0a605fea6d51d786913 223 Gene3D G3DSA:1.10.287.540 67 95 8.5E-6 T 22-04-2016 IPR023218 UPF0291 structural domain RMET_RS16400 50e9a03eb1c8c0a605fea6d51d786913 223 PANTHER PTHR39555 10 212 2.8E-39 T 22-04-2016 RMET_RS16400 50e9a03eb1c8c0a605fea6d51d786913 223 PANTHER PTHR39555:SF1 10 212 2.8E-39 T 22-04-2016 RMET_RS16400 50e9a03eb1c8c0a605fea6d51d786913 223 Gene3D G3DSA:3.30.70.60 104 209 6.6E-33 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RMET_RS16400 50e9a03eb1c8c0a605fea6d51d786913 223 PIRSF PIRSF016482 8 217 1.7E-48 T 22-04-2016 IPR007445 Pilus assembly protein, PilO RMET_RS16400 50e9a03eb1c8c0a605fea6d51d786913 223 Pfam PF04350 Pilus assembly protein, PilO 59 199 3.0E-43 T 22-04-2016 IPR007445 Pilus assembly protein, PilO RMET_RS02400 000adab363a5b006f7b0bc87bf4b0294 595 Pfam PF15864 Protein glycosylation ligase 172 196 1.3E-6 T 22-04-2016 IPR031726 Protein glycosylation ligase domain RMET_RS02400 000adab363a5b006f7b0bc87bf4b0294 595 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 399 563 6.1E-36 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal RMET_RS02400 000adab363a5b006f7b0bc87bf4b0294 595 Pfam PF04932 O-Antigen ligase 209 368 1.6E-17 T 22-04-2016 IPR007016 O-antigen ligase-related RMET_RS05590 6f596baeeb1863cc0a69a4814cb770c1 254 Gene3D G3DSA:3.20.20.60 9 250 2.3E-55 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS05590 6f596baeeb1863cc0a69a4814cb770c1 254 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 239 1.5E-25 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RMET_RS05590 6f596baeeb1863cc0a69a4814cb770c1 254 SUPERFAMILY SSF51621 12 250 2.55E-58 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS05590 6f596baeeb1863cc0a69a4814cb770c1 254 PANTHER PTHR30502:SF0 2 247 7.9E-57 T 22-04-2016 RMET_RS05590 6f596baeeb1863cc0a69a4814cb770c1 254 PANTHER PTHR30502 2 247 7.9E-57 T 22-04-2016 RMET_RS01395 dea53f4f8b248a3e523bbfd9e9bbfc13 329 Gene3D G3DSA:3.40.1030.10 87 313 1.3E-24 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RMET_RS01395 dea53f4f8b248a3e523bbfd9e9bbfc13 329 Pfam PF02885 Glycosyl transferase family, helical bundle domain 14 76 1.3E-9 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RMET_RS01395 dea53f4f8b248a3e523bbfd9e9bbfc13 329 SUPERFAMILY SSF52418 87 320 1.45E-37 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RMET_RS01395 dea53f4f8b248a3e523bbfd9e9bbfc13 329 Gene3D G3DSA:1.20.970.10 15 78 1.6E-17 T 22-04-2016 RMET_RS01395 dea53f4f8b248a3e523bbfd9e9bbfc13 329 SUPERFAMILY SSF47648 14 81 1.31E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RMET_RS06810 c2a96a3e1b49c905c808f88363cbba01 81 Pfam PF10038 Protein of unknown function (DUF2274) 5 70 1.3E-27 T 22-04-2016 IPR018733 Protein of unknown function DUF2274 RMET_RS03835 2a43ff31a5f269f75e9491e4b0513e01 373 PIRSF PIRSF007313 1 364 2.0E-147 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 RMET_RS03835 2a43ff31a5f269f75e9491e4b0513e01 373 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 353 5.5E-156 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 RMET_RS06705 04f4e3f59605828efe55cfe875092f47 89 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 9 82 2.0E-37 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS06705 04f4e3f59605828efe55cfe875092f47 89 Pfam PF02406 MmoB/DmpM family 3 85 1.9E-30 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS06705 04f4e3f59605828efe55cfe875092f47 89 Gene3D G3DSA:3.90.56.10 2 89 1.7E-32 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS06705 04f4e3f59605828efe55cfe875092f47 89 SUPERFAMILY SSF56029 3 88 9.03E-31 T 22-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 RMET_RS07900 cfd9c1d64f338de3f2ec3ec0c5cbae37 170 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 9.9E-65 T 22-04-2016 IPR018531 Domain of unknown function DUF1993 RMET_RS07900 cfd9c1d64f338de3f2ec3ec0c5cbae37 170 SUPERFAMILY SSF109854 4 167 3.75E-63 T 22-04-2016 RMET_RS07900 cfd9c1d64f338de3f2ec3ec0c5cbae37 170 PANTHER PTHR36922 1 169 1.1E-76 T 22-04-2016 RMET_RS07900 cfd9c1d64f338de3f2ec3ec0c5cbae37 170 PANTHER PTHR36922:SF1 1 169 1.1E-76 T 22-04-2016 RMET_RS07900 cfd9c1d64f338de3f2ec3ec0c5cbae37 170 Gene3D G3DSA:1.20.120.450 1 166 1.6E-72 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RMET_RS11825 e71e73a9618e52c38ed664cd9699810e 148 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 35 144 5.0E-42 T 22-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 RMET_RS11825 e71e73a9618e52c38ed664cd9699810e 148 Pfam PF07511 Protein of unknown function (DUF1525) 35 146 4.2E-43 T 22-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 RMET_RS12675 355b75714667b542f8e8e3ea2402a4a3 149 Pfam PF13452 N-terminal half of MaoC dehydratase 6 140 5.8E-47 T 22-04-2016 RMET_RS12675 355b75714667b542f8e8e3ea2402a4a3 149 PIRSF PIRSF018072 1 149 1.3E-42 T 22-04-2016 IPR016709 Uncharacterised protein family UPF0336 RMET_RS12675 355b75714667b542f8e8e3ea2402a4a3 149 Gene3D G3DSA:3.10.129.10 4 147 1.2E-31 T 22-04-2016 IPR029069 HotDog domain RMET_RS12675 355b75714667b542f8e8e3ea2402a4a3 149 PANTHER PTHR13078 4 149 1.7E-12 T 22-04-2016 RMET_RS12675 355b75714667b542f8e8e3ea2402a4a3 149 SUPERFAMILY SSF54637 6 147 1.34E-35 T 22-04-2016 IPR029069 HotDog domain RMET_RS12675 355b75714667b542f8e8e3ea2402a4a3 149 PANTHER PTHR13078:SF52 4 149 1.7E-12 T 22-04-2016 RMET_RS17925 f6b51cc196dc07fc7f3c619d6d869be0 129 SUPERFAMILY SSF52833 11 88 3.46E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS17925 f6b51cc196dc07fc7f3c619d6d869be0 129 Gene3D G3DSA:3.40.30.10 26 83 3.1E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS17925 f6b51cc196dc07fc7f3c619d6d869be0 129 Pfam PF00085 Thioredoxin 29 83 2.4E-7 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RMET_RS06935 3eda992d8d60d6746b0cd263674bf947 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 290 2.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06935 3eda992d8d60d6746b0cd263674bf947 311 PANTHER PTHR30406:SF6 2 298 3.3E-164 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RMET_RS06935 3eda992d8d60d6746b0cd263674bf947 311 SUPERFAMILY SSF161098 38 287 1.57E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06935 3eda992d8d60d6746b0cd263674bf947 311 PANTHER PTHR30406 2 298 3.3E-164 T 22-04-2016 RMET_RS06935 3eda992d8d60d6746b0cd263674bf947 311 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 23 289 2.8E-100 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RMET_RS06935 3eda992d8d60d6746b0cd263674bf947 311 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 30 293 1.1E-129 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RMET_RS06935 3eda992d8d60d6746b0cd263674bf947 311 Gene3D G3DSA:1.10.3720.10 40 293 7.0E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 PANTHER PTHR22855 1 318 1.3E-122 T 22-04-2016 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.3E-65 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 9.3E-46 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 9.3E-46 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 9.3E-46 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 9.3E-46 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 9.3E-46 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 9.3E-46 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 Gene3D G3DSA:3.90.226.10 57 281 5.4E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 PANTHER PTHR22855:SF42 1 318 1.3E-122 T 22-04-2016 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 49.355 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.1E-149 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RMET_RS05465 c9d72ac00bb2da7f4fdbb1437c1fd610 323 SUPERFAMILY SSF52096 5 316 1.19E-99 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RMET_RS14515 97ec1ebfce6e6340709c0201e84ecd6e 214 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RMET_RS14515 97ec1ebfce6e6340709c0201e84ecd6e 214 PANTHER PTHR21600 122 176 4.5E-67 T 22-04-2016 RMET_RS14515 97ec1ebfce6e6340709c0201e84ecd6e 214 PANTHER PTHR21600 3 104 4.5E-67 T 22-04-2016 RMET_RS14515 97ec1ebfce6e6340709c0201e84ecd6e 214 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 178 2.6E-48 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RMET_RS14515 97ec1ebfce6e6340709c0201e84ecd6e 214 PANTHER PTHR21600:SF23 122 176 4.5E-67 T 22-04-2016 RMET_RS14515 97ec1ebfce6e6340709c0201e84ecd6e 214 PANTHER PTHR21600:SF23 3 104 4.5E-67 T 22-04-2016 RMET_RS14515 97ec1ebfce6e6340709c0201e84ecd6e 214 Pfam PF00849 RNA pseudouridylate synthase 3 148 1.2E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS14515 97ec1ebfce6e6340709c0201e84ecd6e 214 SUPERFAMILY SSF55120 3 177 9.6E-39 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RMET_RS09420 e29063ef7a31816c76d7c8a68df01a1d 226 SUPERFAMILY SSF52266 44 222 7.33E-47 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RMET_RS09420 e29063ef7a31816c76d7c8a68df01a1d 226 PANTHER PTHR30383 5 219 1.5E-40 T 22-04-2016 RMET_RS09420 e29063ef7a31816c76d7c8a68df01a1d 226 PANTHER PTHR30383:SF5 5 219 1.5E-40 T 22-04-2016 RMET_RS09420 e29063ef7a31816c76d7c8a68df01a1d 226 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 47 205 1.1E-23 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RMET_RS09420 e29063ef7a31816c76d7c8a68df01a1d 226 Gene3D G3DSA:3.40.50.1110 43 223 1.2E-51 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RMET_RS11805 93ea99e2d471a8e0cc7bc4f4253b6fd9 146 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 142 8.9E-52 T 22-04-2016 IPR022262 Lipoprotein, putative RMET_RS16865 2d2acb85abb5f4f50212ec0f56fe4cf6 209 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 51 104 6.0E-12 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RMET_RS16865 2d2acb85abb5f4f50212ec0f56fe4cf6 209 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 93 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RMET_RS16865 2d2acb85abb5f4f50212ec0f56fe4cf6 209 PANTHER PTHR11086:SF4 42 107 4.4E-17 T 22-04-2016 RMET_RS16865 2d2acb85abb5f4f50212ec0f56fe4cf6 209 SUPERFAMILY SSF53927 49 152 3.41E-21 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RMET_RS16865 2d2acb85abb5f4f50212ec0f56fe4cf6 209 PANTHER PTHR11086 42 107 4.4E-17 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related RMET_RS16865 2d2acb85abb5f4f50212ec0f56fe4cf6 209 Gene3D G3DSA:3.40.140.10 23 140 1.3E-23 T 22-04-2016 RMET_RS07790 21debd95b293e22bfe4030c2da887bf8 669 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 111 558 1.8E-103 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 RMET_RS07790 21debd95b293e22bfe4030c2da887bf8 669 SUPERFAMILY SSF52540 105 554 1.75E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07790 21debd95b293e22bfe4030c2da887bf8 669 PANTHER PTHR37937:SF1 9 570 3.0E-105 T 22-04-2016 RMET_RS07790 21debd95b293e22bfe4030c2da887bf8 669 Gene3D G3DSA:3.40.50.300 105 209 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07790 21debd95b293e22bfe4030c2da887bf8 669 Gene3D G3DSA:3.40.50.300 347 552 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07790 21debd95b293e22bfe4030c2da887bf8 669 PANTHER PTHR37937 9 570 3.0E-105 T 22-04-2016 RMET_RS21915 04312aae3a30c4e2f94d51ad7d267b86 295 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 1 58 2.2E-20 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS21915 04312aae3a30c4e2f94d51ad7d267b86 295 PANTHER PTHR32294 1 295 2.5E-145 T 22-04-2016 RMET_RS21915 04312aae3a30c4e2f94d51ad7d267b86 295 Gene3D G3DSA:1.10.150.280 158 205 1.1E-4 T 22-04-2016 RMET_RS21915 04312aae3a30c4e2f94d51ad7d267b86 295 PANTHER PTHR32294:SF0 1 295 2.5E-145 T 22-04-2016 RMET_RS21915 04312aae3a30c4e2f94d51ad7d267b86 295 Pfam PF14579 Helix-hairpin-helix motif 131 220 3.2E-30 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RMET_RS00275 97ec0ccc05f7a3ce60afbff20133b7f6 336 PANTHER PTHR34138:SF1 5 283 3.2E-66 T 22-04-2016 RMET_RS00275 97ec0ccc05f7a3ce60afbff20133b7f6 336 PANTHER PTHR34138 5 283 3.2E-66 T 22-04-2016 RMET_RS00275 97ec0ccc05f7a3ce60afbff20133b7f6 336 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 278 2.3E-52 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RMET_RS00275 97ec0ccc05f7a3ce60afbff20133b7f6 336 Pfam PF04085 rod shape-determining protein MreC 129 273 1.7E-36 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RMET_RS17275 a8a0bc729e6bfea0b4e71c279c843728 206 Gene3D G3DSA:3.40.50.360 1 200 1.8E-51 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS17275 a8a0bc729e6bfea0b4e71c279c843728 206 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 201 25.749 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 RMET_RS17275 a8a0bc729e6bfea0b4e71c279c843728 206 PANTHER PTHR10204 1 185 8.4E-36 T 22-04-2016 RMET_RS17275 a8a0bc729e6bfea0b4e71c279c843728 206 PANTHER PTHR10204:SF37 1 185 8.4E-36 T 22-04-2016 RMET_RS17275 a8a0bc729e6bfea0b4e71c279c843728 206 SUPERFAMILY SSF52218 1 200 3.87E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS17275 a8a0bc729e6bfea0b4e71c279c843728 206 Pfam PF02525 Flavodoxin-like fold 3 192 5.0E-39 T 22-04-2016 IPR003680 Flavodoxin-like fold RMET_RS16635 74a07fc08d860b928822808186fae29e 214 PANTHER PTHR11229 4 211 6.0E-107 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16635 74a07fc08d860b928822808186fae29e 214 Gene3D G3DSA:2.40.30.10 161 211 1.5E-8 T 22-04-2016 RMET_RS16635 74a07fc08d860b928822808186fae29e 214 Gene3D G3DSA:2.40.30.10 4 33 1.5E-8 T 22-04-2016 RMET_RS16635 74a07fc08d860b928822808186fae29e 214 Gene3D G3DSA:4.10.960.10 81 160 3.1E-27 T 22-04-2016 RMET_RS16635 74a07fc08d860b928822808186fae29e 214 Pfam PF00297 Ribosomal protein L3 54 185 1.1E-15 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16635 74a07fc08d860b928822808186fae29e 214 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 39.093 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16635 74a07fc08d860b928822808186fae29e 214 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 7.8E-86 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16635 74a07fc08d860b928822808186fae29e 214 SUPERFAMILY SSF50447 2 212 6.45E-77 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS16635 74a07fc08d860b928822808186fae29e 214 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site RMET_RS06875 89bd20c61005eacc7f78155144c197ad 400 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 29 396 1.4E-120 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 RMET_RS06875 89bd20c61005eacc7f78155144c197ad 400 SUPERFAMILY SSF53383 31 396 1.32E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS06875 89bd20c61005eacc7f78155144c197ad 400 PANTHER PTHR11808 30 400 1.6E-128 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS06875 89bd20c61005eacc7f78155144c197ad 400 Gene3D G3DSA:3.90.1150.10 262 396 5.7E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS06875 89bd20c61005eacc7f78155144c197ad 400 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 396 4.2E-91 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS06875 89bd20c61005eacc7f78155144c197ad 400 PIRSF PIRSF001434 2 398 1.8E-116 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RMET_RS06875 89bd20c61005eacc7f78155144c197ad 400 PANTHER PTHR11808:SF45 30 400 1.6E-128 T 22-04-2016 RMET_RS06875 89bd20c61005eacc7f78155144c197ad 400 Gene3D G3DSA:3.40.640.10 11 258 3.7E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS17205 9c783cd5badaff75853746a70121633f 108 Gene3D G3DSA:1.10.760.10 24 102 5.1E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17205 9c783cd5badaff75853746a70121633f 108 SUPERFAMILY SSF46626 25 102 4.58E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17205 9c783cd5badaff75853746a70121633f 108 PRINTS PR00606 Class ID cytochrome C signature 81 91 5.6E-23 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS17205 9c783cd5badaff75853746a70121633f 108 PRINTS PR00606 Class ID cytochrome C signature 93 103 5.6E-23 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS17205 9c783cd5badaff75853746a70121633f 108 PRINTS PR00606 Class ID cytochrome C signature 28 41 5.6E-23 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS17205 9c783cd5badaff75853746a70121633f 108 PRINTS PR00606 Class ID cytochrome C signature 66 79 5.6E-23 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS17205 9c783cd5badaff75853746a70121633f 108 PRINTS PR00606 Class ID cytochrome C signature 43 56 5.6E-23 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RMET_RS17205 9c783cd5badaff75853746a70121633f 108 Pfam PF00034 Cytochrome c 22 102 2.0E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS14095 a32a8a7087b2a9d83fa0c2f43cf43e5c 387 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 378 1.4E-66 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RMET_RS14095 a32a8a7087b2a9d83fa0c2f43cf43e5c 387 PANTHER PTHR33529 1 382 7.8E-73 T 22-04-2016 RMET_RS14095 a32a8a7087b2a9d83fa0c2f43cf43e5c 387 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 383 3.2E-102 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 RMET_RS14095 a32a8a7087b2a9d83fa0c2f43cf43e5c 387 PANTHER PTHR33529:SF1 1 382 7.8E-73 T 22-04-2016 RMET_RS01240 a428f19f7cce5f5ec694675bb7614cde 151 PANTHER PTHR33799 2 137 1.6E-26 T 22-04-2016 RMET_RS01240 a428f19f7cce5f5ec694675bb7614cde 151 Gene3D G3DSA:3.40.50.510 1 127 4.4E-37 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RMET_RS01240 a428f19f7cce5f5ec694675bb7614cde 151 SUPERFAMILY SSF53062 1 127 9.55E-30 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RMET_RS01240 a428f19f7cce5f5ec694675bb7614cde 151 Pfam PF03610 PTS system fructose IIA component 3 106 6.7E-18 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 Gene3D G3DSA:1.10.10.10 4 87 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 SUPERFAMILY SSF53850 91 300 9.59E-43 T 22-04-2016 RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 Gene3D G3DSA:3.40.190.10 175 272 2.3E-26 T 22-04-2016 RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 Pfam PF03466 LysR substrate binding domain 97 300 3.9E-22 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 PANTHER PTHR30118:SF8 1 310 1.6E-75 T 22-04-2016 RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 SUPERFAMILY SSF46785 6 85 3.36E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 PANTHER PTHR30118 1 310 1.6E-75 T 22-04-2016 RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 Gene3D G3DSA:3.40.190.10 276 304 5.8E-30 T 22-04-2016 RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 Gene3D G3DSA:3.40.190.10 91 174 5.8E-30 T 22-04-2016 RMET_RS04505 56f4783fbf9b1a0c0ff257e4bd6df1d3 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.1E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS11115 35c5a854f414f7b4e547f1e9bfa48b02 198 Gene3D G3DSA:1.10.8.10 130 188 5.9E-14 T 22-04-2016 RMET_RS11115 35c5a854f414f7b4e547f1e9bfa48b02 198 PIRSF PIRSF029669 1 198 1.9E-77 T 22-04-2016 IPR016932 Uncharacterised conserved protein UCP029669 RMET_RS11115 35c5a854f414f7b4e547f1e9bfa48b02 198 Pfam PF08857 Putative ParB-like nuclease 9 162 4.1E-51 T 22-04-2016 IPR014956 Putative ParB-like nuclease RMET_RS11115 35c5a854f414f7b4e547f1e9bfa48b02 198 Gene3D G3DSA:3.90.1530.10 7 129 1.5E-40 T 22-04-2016 RMET_RS11115 35c5a854f414f7b4e547f1e9bfa48b02 198 SUPERFAMILY SSF110849 9 196 2.14E-65 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RMET_RS00610 6dc553746b525ef3cd58c9bf40a8b20d 165 Pfam PF04073 Aminoacyl-tRNA editing domain 34 149 4.3E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS00610 6dc553746b525ef3cd58c9bf40a8b20d 165 Gene3D G3DSA:3.90.960.10 10 161 1.1E-40 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS00610 6dc553746b525ef3cd58c9bf40a8b20d 165 PANTHER PTHR30411 35 159 5.7E-23 T 22-04-2016 RMET_RS00610 6dc553746b525ef3cd58c9bf40a8b20d 165 SUPERFAMILY SSF55826 13 161 1.44E-30 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RMET_RS00610 6dc553746b525ef3cd58c9bf40a8b20d 165 PANTHER PTHR30411:SF1 35 159 5.7E-23 T 22-04-2016 RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 SUPERFAMILY SSF46894 127 229 1.98E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 Pfam PF00072 Response regulator receiver domain 3 112 3.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 SMART SM00448 1 112 5.4E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 SUPERFAMILY SSF52172 1 123 1.02E-37 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 Gene3D G3DSA:1.10.10.10 126 229 3.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 228 7.9E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 SMART SM00862 148 228 4.8E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 PANTHER PTHR26402 1 229 3.9E-74 T 22-04-2016 RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 PANTHER PTHR26402:SF518 1 229 3.9E-74 T 22-04-2016 RMET_RS17760 aff3395f60b710c6cad85651f25d906a 234 Gene3D G3DSA:3.40.50.2300 1 121 7.4E-38 T 22-04-2016 RMET_RS05565 29f55d58b996fe8503afd993ad8ab322 542 Pfam PF03929 PepSY-associated TM region 15 379 1.3E-48 T 22-04-2016 IPR005625 PepSY-associated TM protein RMET_RS05565 29f55d58b996fe8503afd993ad8ab322 542 PANTHER PTHR34219:SF4 8 527 1.8E-196 T 22-04-2016 RMET_RS05565 29f55d58b996fe8503afd993ad8ab322 542 PANTHER PTHR34219 8 527 1.8E-196 T 22-04-2016 RMET_RS11855 f09c6257008e71f716f384720ef885c1 210 Pfam PF08808 RES domain 29 176 1.0E-20 T 22-04-2016 IPR014914 RES domain RMET_RS11855 f09c6257008e71f716f384720ef885c1 210 SMART SM00953 28 175 4.1E-16 T 22-04-2016 IPR014914 RES domain RMET_RS19870 8fda0d41be234063437456da6f8e43d9 312 SUPERFAMILY SSF53686 54 310 7.6E-82 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS19870 8fda0d41be234063437456da6f8e43d9 312 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 310 5.1E-68 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS19870 8fda0d41be234063437456da6f8e43d9 312 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 84 97 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RMET_RS19870 8fda0d41be234063437456da6f8e43d9 312 PANTHER PTHR10314 24 312 2.9E-148 T 22-04-2016 RMET_RS19870 8fda0d41be234063437456da6f8e43d9 312 Gene3D G3DSA:3.40.50.1100 111 311 1.8E-64 T 22-04-2016 RMET_RS19870 8fda0d41be234063437456da6f8e43d9 312 PANTHER PTHR10314:SF30 24 312 2.9E-148 T 22-04-2016 RMET_RS19870 8fda0d41be234063437456da6f8e43d9 312 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 46 312 5.4E-126 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RMET_RS03030 5a352192c5604671a80c291c79cf8d89 124 Pfam PF13473 Cupredoxin-like domain 18 108 7.2E-12 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain RMET_RS03030 5a352192c5604671a80c291c79cf8d89 124 Gene3D G3DSA:2.60.40.420 15 123 1.3E-20 T 22-04-2016 IPR008972 Cupredoxin RMET_RS03030 5a352192c5604671a80c291c79cf8d89 124 PANTHER PTHR22888 51 124 2.3E-13 T 22-04-2016 RMET_RS03030 5a352192c5604671a80c291c79cf8d89 124 PRINTS PR01166 Cytochrome c oxidase subunit II signature 68 88 6.6E-5 T 22-04-2016 RMET_RS03030 5a352192c5604671a80c291c79cf8d89 124 PRINTS PR01166 Cytochrome c oxidase subunit II signature 106 123 6.6E-5 T 22-04-2016 RMET_RS03030 5a352192c5604671a80c291c79cf8d89 124 PRINTS PR01166 Cytochrome c oxidase subunit II signature 44 65 6.6E-5 T 22-04-2016 RMET_RS03030 5a352192c5604671a80c291c79cf8d89 124 SUPERFAMILY SSF49503 32 123 1.53E-22 T 22-04-2016 IPR008972 Cupredoxin RMET_RS01350 08236378a2fa4f67b5dbdeddd6be07bc 286 PANTHER PTHR11403:SF0 2 286 1.1E-98 T 22-04-2016 RMET_RS01350 08236378a2fa4f67b5dbdeddd6be07bc 286 Gene3D G3DSA:1.20.120.80 81 286 7.2E-66 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RMET_RS01350 08236378a2fa4f67b5dbdeddd6be07bc 286 SUPERFAMILY SSF81452 8 286 8.06E-84 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RMET_RS01350 08236378a2fa4f67b5dbdeddd6be07bc 286 Pfam PF00510 Cytochrome c oxidase subunit III 11 285 4.1E-63 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RMET_RS01350 08236378a2fa4f67b5dbdeddd6be07bc 286 PANTHER PTHR11403 2 286 1.1E-98 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RMET_RS01350 08236378a2fa4f67b5dbdeddd6be07bc 286 Gene3D G3DSA:1.10.287.70 7 73 4.4E-15 T 22-04-2016 RMET_RS04395 ff3a9d5029b29d421361a4cec4c00050 541 Pfam PF03961 Protein of unknown function (DUF342) 85 536 4.0E-112 T 22-04-2016 IPR005646 Protein of unknown function DUF342 RMET_RS04395 ff3a9d5029b29d421361a4cec4c00050 541 PANTHER PTHR38032 69 541 2.5E-79 T 22-04-2016 RMET_RS04395 ff3a9d5029b29d421361a4cec4c00050 541 Gene3D G3DSA:2.160.20.70 284 329 9.1E-4 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RMET_RS26160 c755752ea47cd743c520818cbf5901c2 323 PANTHER PTHR30451:SF7 149 323 1.2E-114 T 22-04-2016 RMET_RS26160 c755752ea47cd743c520818cbf5901c2 323 PANTHER PTHR30451:SF7 1 130 1.2E-114 T 22-04-2016 RMET_RS26160 c755752ea47cd743c520818cbf5901c2 323 Pfam PF00577 Outer membrane usher protein 3 322 2.6E-53 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS26160 c755752ea47cd743c520818cbf5901c2 323 PANTHER PTHR30451 149 323 1.2E-114 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS26160 c755752ea47cd743c520818cbf5901c2 323 PANTHER PTHR30451 1 130 1.2E-114 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RMET_RS08430 0d407da1e98662b6a41f7385caae9c7e 411 Gene3D G3DSA:1.20.1250.20 14 198 4.6E-23 T 22-04-2016 RMET_RS08430 0d407da1e98662b6a41f7385caae9c7e 411 Gene3D G3DSA:1.20.1250.20 205 399 1.9E-17 T 22-04-2016 RMET_RS08430 0d407da1e98662b6a41f7385caae9c7e 411 PANTHER PTHR11360:SF115 6 406 9.2E-117 T 22-04-2016 RMET_RS08430 0d407da1e98662b6a41f7385caae9c7e 411 SUPERFAMILY SSF103473 7 397 6.54E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS08430 0d407da1e98662b6a41f7385caae9c7e 411 Pfam PF07690 Major Facilitator Superfamily 21 361 6.7E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS08430 0d407da1e98662b6a41f7385caae9c7e 411 PANTHER PTHR11360 6 406 9.2E-117 T 22-04-2016 RMET_RS08380 4a09dc93ecfbf4765346756c323f0844 146 PRINTS PR01483 Fatty acid synthase signature 48 69 7.2E-5 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RMET_RS08380 4a09dc93ecfbf4765346756c323f0844 146 PRINTS PR01483 Fatty acid synthase signature 26 48 7.2E-5 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RMET_RS08380 4a09dc93ecfbf4765346756c323f0844 146 Gene3D G3DSA:3.10.129.10 9 137 4.8E-48 T 22-04-2016 IPR029069 HotDog domain RMET_RS08380 4a09dc93ecfbf4765346756c323f0844 146 PANTHER PTHR13078 3 137 4.2E-42 T 22-04-2016 RMET_RS08380 4a09dc93ecfbf4765346756c323f0844 146 SUPERFAMILY SSF54637 6 140 2.88E-43 T 22-04-2016 IPR029069 HotDog domain RMET_RS08380 4a09dc93ecfbf4765346756c323f0844 146 Pfam PF01575 MaoC like domain 18 114 1.8E-27 T 22-04-2016 IPR002539 MaoC-like domain RMET_RS08140 f3fc5a3281e41aca6347fb603f964e17 420 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS08140 f3fc5a3281e41aca6347fb603f964e17 420 PANTHER PTHR11986:SF70 5 416 2.8E-198 T 22-04-2016 RMET_RS08140 f3fc5a3281e41aca6347fb603f964e17 420 Gene3D G3DSA:3.40.640.10 58 302 1.7E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RMET_RS08140 f3fc5a3281e41aca6347fb603f964e17 420 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 419 1.1E-189 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 RMET_RS08140 f3fc5a3281e41aca6347fb603f964e17 420 PANTHER PTHR11986 5 416 2.8E-198 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS08140 f3fc5a3281e41aca6347fb603f964e17 420 Gene3D G3DSA:3.90.1150.10 303 419 5.2E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RMET_RS08140 f3fc5a3281e41aca6347fb603f964e17 420 Pfam PF00202 Aminotransferase class-III 24 418 5.0E-128 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RMET_RS08140 f3fc5a3281e41aca6347fb603f964e17 420 SUPERFAMILY SSF53383 23 419 2.63E-135 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RMET_RS07245 5ec2d08d9dc1aaa48ad25206e22e0831 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 27.495 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RMET_RS07245 5ec2d08d9dc1aaa48ad25206e22e0831 186 Pfam PF01765 Ribosome recycling factor 21 184 1.6E-64 T 22-04-2016 IPR023584 Ribosome recycling factor domain RMET_RS07245 5ec2d08d9dc1aaa48ad25206e22e0831 186 Gene3D G3DSA:1.10.132.20 67 186 1.2E-46 T 22-04-2016 IPR023584 Ribosome recycling factor domain RMET_RS07245 5ec2d08d9dc1aaa48ad25206e22e0831 186 SUPERFAMILY SSF55194 6 185 1.13E-72 T 22-04-2016 IPR023584 Ribosome recycling factor domain RMET_RS07245 5ec2d08d9dc1aaa48ad25206e22e0831 186 PANTHER PTHR20982 7 186 2.0E-79 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RMET_RS07245 5ec2d08d9dc1aaa48ad25206e22e0831 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 6.8E-70 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 1.7E-7 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 1.7E-7 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.7E-7 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.7E-7 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PANTHER PTHR22912 217 329 3.8E-22 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PANTHER PTHR22912 175 200 3.8E-22 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PANTHER PTHR22912 1 157 3.8E-22 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 347 1.8E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 Gene3D G3DSA:3.50.50.60 123 354 2.7E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 SUPERFAMILY SSF51905 7 354 1.21E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 5.1E-10 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 5.1E-10 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 5.1E-10 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 118 136 5.1E-10 T 22-04-2016 RMET_RS13185 61f9ed6a0daa07879bc518eb32305514 443 Gene3D G3DSA:3.50.50.60 8 122 1.5E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS07890 147e7a5f87ad1b8519e9e3dda1bd3db4 139 SMART SM00086 82 124 0.0084 T 22-04-2016 IPR001610 PAC motif RMET_RS07890 147e7a5f87ad1b8519e9e3dda1bd3db4 139 Pfam PF00989 PAS fold 10 121 4.3E-18 T 22-04-2016 IPR013767 PAS fold GO:0006355 RMET_RS07890 147e7a5f87ad1b8519e9e3dda1bd3db4 139 Gene3D G3DSA:3.30.450.20 4 131 6.9E-26 T 22-04-2016 RMET_RS07890 147e7a5f87ad1b8519e9e3dda1bd3db4 139 PANTHER PTHR24423 10 130 1.6E-16 T 22-04-2016 RMET_RS07890 147e7a5f87ad1b8519e9e3dda1bd3db4 139 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 130 3.8E-25 T 22-04-2016 IPR000014 PAS domain RMET_RS07890 147e7a5f87ad1b8519e9e3dda1bd3db4 139 SMART SM00091 6 72 1.4E-12 T 22-04-2016 IPR000014 PAS domain RMET_RS07890 147e7a5f87ad1b8519e9e3dda1bd3db4 139 SUPERFAMILY SSF55785 17 130 1.11E-26 T 22-04-2016 IPR000014 PAS domain RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 336 2.7E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 487 7.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 Gene3D G3DSA:1.10.287.130 261 332 4.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 SUPERFAMILY SSF47384 252 336 4.32E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 Gene3D G3DSA:3.30.565.10 341 488 4.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 SMART SM00387 382 489 1.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 SMART SM00388 268 336 1.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 Pfam PF00672 HAMP domain 175 256 1.9E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 PANTHER PTHR24423 38 44 2.0E-56 T 22-04-2016 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 PANTHER PTHR24423 240 488 2.0E-56 T 22-04-2016 RMET_RS05915 9312a40578f66082325ef45e9397bfc7 504 SUPERFAMILY SSF55874 326 489 1.83E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS16265 9a71183dfe15e1bea60f51fd310fd745 247 Pfam PF00977 Histidine biosynthesis protein 3 232 1.0E-80 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RMET_RS16265 9a71183dfe15e1bea60f51fd310fd745 247 SUPERFAMILY SSF51366 1 239 6.28E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RMET_RS16265 9a71183dfe15e1bea60f51fd310fd745 247 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 3.5E-78 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RMET_RS16265 9a71183dfe15e1bea60f51fd310fd745 247 PANTHER PTHR21235 1 239 1.3E-98 T 22-04-2016 RMET_RS16265 9a71183dfe15e1bea60f51fd310fd745 247 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.229 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RMET_RS16265 9a71183dfe15e1bea60f51fd310fd745 247 Gene3D G3DSA:3.20.20.70 1 240 5.4E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS16265 9a71183dfe15e1bea60f51fd310fd745 247 PANTHER PTHR21235:SF15 1 239 1.3E-98 T 22-04-2016 RMET_RS09305 2d4ec5d35be8be2cc78e3082f8f49acf 259 PANTHER PTHR24220:SF358 7 247 2.3E-91 T 22-04-2016 RMET_RS09305 2d4ec5d35be8be2cc78e3082f8f49acf 259 Pfam PF00005 ABC transporter 22 177 5.7E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS09305 2d4ec5d35be8be2cc78e3082f8f49acf 259 SUPERFAMILY SSF52540 4 246 2.22E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09305 2d4ec5d35be8be2cc78e3082f8f49acf 259 PANTHER PTHR24220 7 247 2.3E-91 T 22-04-2016 RMET_RS09305 2d4ec5d35be8be2cc78e3082f8f49acf 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 5.3E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RMET_RS09305 2d4ec5d35be8be2cc78e3082f8f49acf 259 Gene3D G3DSA:3.40.50.300 2 245 2.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09305 2d4ec5d35be8be2cc78e3082f8f49acf 259 SMART SM00382 30 224 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS04800 61c82b0f14ed8c5c480a213ff2bba9cd 400 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 55 368 3.6E-134 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RMET_RS04800 61c82b0f14ed8c5c480a213ff2bba9cd 400 PANTHER PTHR30482 9 106 6.8E-178 T 22-04-2016 RMET_RS04800 61c82b0f14ed8c5c480a213ff2bba9cd 400 PANTHER PTHR30482 133 398 6.8E-178 T 22-04-2016 RMET_RS04800 61c82b0f14ed8c5c480a213ff2bba9cd 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 357 2.6E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS04800 61c82b0f14ed8c5c480a213ff2bba9cd 400 PANTHER PTHR30482:SF4 9 106 6.8E-178 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RMET_RS04800 61c82b0f14ed8c5c480a213ff2bba9cd 400 PANTHER PTHR30482:SF4 133 398 6.8E-178 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RMET_RS17595 0dd674e2d41db863a2b7a15ea6212c46 180 Pfam PF03899 ATP synthase I chain 72 167 1.3E-17 T 22-04-2016 IPR005598 ATP synthase protein I RMET_RS00540 85afab3c25edb3e0ccd9ae15f4fe122d 223 PANTHER PTHR11002 1 209 5.6E-106 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS00540 85afab3c25edb3e0ccd9ae15f4fe122d 223 SUPERFAMILY SSF53056 2 205 6.54E-73 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS00540 85afab3c25edb3e0ccd9ae15f4fe122d 223 Pfam PF00484 Carbonic anhydrase 38 189 1.7E-49 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS00540 85afab3c25edb3e0ccd9ae15f4fe122d 223 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS00540 85afab3c25edb3e0ccd9ae15f4fe122d 223 Gene3D G3DSA:3.40.1050.10 2 208 7.3E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS00540 85afab3c25edb3e0ccd9ae15f4fe122d 223 SMART SM00947 31 194 1.8E-67 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RMET_RS00540 85afab3c25edb3e0ccd9ae15f4fe122d 223 PANTHER PTHR11002:SF20 1 209 5.6E-106 T 22-04-2016 RMET_RS16440 28fba907bc70899bb304537ac76bdd4d 336 Gene3D G3DSA:3.90.420.10 77 335 5.5E-71 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RMET_RS16440 28fba907bc70899bb304537ac76bdd4d 336 PANTHER PTHR19372 64 331 7.2E-136 T 22-04-2016 RMET_RS16440 28fba907bc70899bb304537ac76bdd4d 336 PANTHER PTHR19372:SF1 64 331 7.2E-136 T 22-04-2016 RMET_RS16440 28fba907bc70899bb304537ac76bdd4d 336 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 5 336 59.429 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 RMET_RS16440 28fba907bc70899bb304537ac76bdd4d 336 SUPERFAMILY SSF56524 76 332 9.03E-91 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RMET_RS16440 28fba907bc70899bb304537ac76bdd4d 336 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 263 2.2E-28 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RMET_RS16395 a7ec00d6c6c3ffddb7b245adf0589697 170 PIRSF PIRSF016481 3 170 5.0E-41 T 22-04-2016 IPR007446 Pilus assembly protein PilP RMET_RS16395 a7ec00d6c6c3ffddb7b245adf0589697 170 Pfam PF04351 Pilus assembly protein, PilP 27 166 7.6E-44 T 22-04-2016 IPR007446 Pilus assembly protein PilP RMET_RS04730 fe5b7f155452aff523087e4c9ffefd94 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 1.3E-5 T 22-04-2016 RMET_RS04730 fe5b7f155452aff523087e4c9ffefd94 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 1.3E-5 T 22-04-2016 RMET_RS04730 fe5b7f155452aff523087e4c9ffefd94 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 1.3E-5 T 22-04-2016 RMET_RS04730 fe5b7f155452aff523087e4c9ffefd94 491 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 476 7.2E-132 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RMET_RS04730 fe5b7f155452aff523087e4c9ffefd94 491 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 478 17.801 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RMET_RS04730 fe5b7f155452aff523087e4c9ffefd94 491 PANTHER PTHR22773:SF41 3 489 1.9E-155 T 22-04-2016 RMET_RS04730 fe5b7f155452aff523087e4c9ffefd94 491 Pfam PF00361 Proton-conducting membrane transporter 126 427 4.6E-74 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RMET_RS04730 fe5b7f155452aff523087e4c9ffefd94 491 PANTHER PTHR22773 3 489 1.9E-155 T 22-04-2016 RMET_RS04465 c3dc70c3c366b450dfb0752118931d86 402 Pfam PF06181 Protein of unknown function (DUF989) 4 298 1.6E-140 T 22-04-2016 IPR010389 Domain of unknown function DUF989 RMET_RS04465 c3dc70c3c366b450dfb0752118931d86 402 SUPERFAMILY SSF46626 309 398 1.17E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS04465 c3dc70c3c366b450dfb0752118931d86 402 Gene3D G3DSA:1.10.760.10 324 391 1.5E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS14730 6a51648186ef37b4c40ab4557db98ca1 294 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 9 292 28.465 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 RMET_RS14730 6a51648186ef37b4c40ab4557db98ca1 294 Pfam PF01040 UbiA prenyltransferase family 32 277 1.5E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RMET_RS14730 6a51648186ef37b4c40ab4557db98ca1 294 PANTHER PTHR11048 11 286 1.7E-77 T 22-04-2016 RMET_RS14730 6a51648186ef37b4c40ab4557db98ca1 294 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site RMET_RS14730 6a51648186ef37b4c40ab4557db98ca1 294 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 15 291 3.4E-96 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 RMET_RS06605 09a0184845ac634e6f4682455d8f1524 114 PANTHER PTHR30007 14 109 1.3E-16 T 22-04-2016 RMET_RS06605 09a0184845ac634e6f4682455d8f1524 114 Pfam PF13586 Transposase DDE domain 26 97 3.8E-12 T 22-04-2016 IPR025668 Transposase DDE domain RMET_RS06605 09a0184845ac634e6f4682455d8f1524 114 PANTHER PTHR30007:SF0 14 109 1.3E-16 T 22-04-2016 RMET_RS26465 87ae6f9a9a39dd7f315e66d3027e4020 140 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 85 92 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS26465 87ae6f9a9a39dd7f315e66d3027e4020 140 SUPERFAMILY SSF56059 4 136 4.6E-43 T 22-04-2016 RMET_RS26465 87ae6f9a9a39dd7f315e66d3027e4020 140 PANTHER PTHR18866 2 140 6.4E-98 T 22-04-2016 RMET_RS26465 87ae6f9a9a39dd7f315e66d3027e4020 140 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 3 122 1.8E-50 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RMET_RS26465 87ae6f9a9a39dd7f315e66d3027e4020 140 Gene3D G3DSA:3.30.470.20 4 140 2.8E-69 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS14630 30a70882a7b1bb8a16568dd21dc88363 229 PANTHER PTHR24220 11 209 2.8E-57 T 22-04-2016 RMET_RS14630 30a70882a7b1bb8a16568dd21dc88363 229 Pfam PF00005 ABC transporter 29 175 1.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS14630 30a70882a7b1bb8a16568dd21dc88363 229 SUPERFAMILY SSF52540 8 211 4.53E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14630 30a70882a7b1bb8a16568dd21dc88363 229 Gene3D G3DSA:3.40.50.300 5 209 5.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS14630 30a70882a7b1bb8a16568dd21dc88363 229 SMART SM00382 34 221 3.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS06685 34145e718e3e50b3ff02d307a978314f 118 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RMET_RS06685 34145e718e3e50b3ff02d307a978314f 118 Gene3D G3DSA:3.10.20.30 7 97 2.4E-18 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS06685 34145e718e3e50b3ff02d307a978314f 118 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 89 7.6E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS06685 34145e718e3e50b3ff02d307a978314f 118 SUPERFAMILY SSF54292 7 97 5.9E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RMET_RS05905 e6557b12b24ea87a7d86d200ab4cd241 156 Pfam PF01641 SelR domain 51 152 1.9E-42 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RMET_RS05905 e6557b12b24ea87a7d86d200ab4cd241 156 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 46 151 3.6E-42 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RMET_RS05905 e6557b12b24ea87a7d86d200ab4cd241 156 PANTHER PTHR10173:SF18 47 151 1.6E-44 T 22-04-2016 RMET_RS05905 e6557b12b24ea87a7d86d200ab4cd241 156 SUPERFAMILY SSF51316 45 151 7.85E-47 T 22-04-2016 IPR011057 Mss4-like RMET_RS05905 e6557b12b24ea87a7d86d200ab4cd241 156 PANTHER PTHR10173 47 151 1.6E-44 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RMET_RS05905 e6557b12b24ea87a7d86d200ab4cd241 156 Gene3D G3DSA:2.170.150.20 41 150 2.1E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RMET_RS24510 c66b0b592dd23812ed44d536aba1cc20 423 Gene3D G3DSA:1.10.645.10 378 423 2.6E-10 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS24510 c66b0b592dd23812ed44d536aba1cc20 423 SUPERFAMILY SSF56762 385 421 1.4E-7 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS24510 c66b0b592dd23812ed44d536aba1cc20 423 PANTHER PTHR11993 335 423 2.0E-19 T 22-04-2016 RMET_RS24510 c66b0b592dd23812ed44d536aba1cc20 423 PANTHER PTHR11993:SF22 335 423 2.0E-19 T 22-04-2016 RMET_RS11675 53fb3c1fc3461073bfed17ea50a786aa 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RMET_RS11675 53fb3c1fc3461073bfed17ea50a786aa 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 1.3E-8 T 22-04-2016 RMET_RS11675 53fb3c1fc3461073bfed17ea50a786aa 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 1.3E-8 T 22-04-2016 RMET_RS11675 53fb3c1fc3461073bfed17ea50a786aa 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 1.3E-8 T 22-04-2016 RMET_RS11675 53fb3c1fc3461073bfed17ea50a786aa 369 Gene3D G3DSA:3.40.50.150 21 172 1.8E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS11675 53fb3c1fc3461073bfed17ea50a786aa 369 SUPERFAMILY SSF53335 18 191 2.11E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 208 3.8E-81 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 SUPERFAMILY SSF51366 1 223 2.83E-68 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 221 1.1E-88 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 PANTHER PTHR11749:SF7 2 225 1.6E-112 T 22-04-2016 RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 141 163 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 PANTHER PTHR11749 2 225 1.6E-112 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 PIRSF PIRSF001461 1 231 1.9E-96 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RMET_RS07595 11b87b49c646fbb54cf0e9b91ca48136 232 Gene3D G3DSA:3.20.20.70 2 225 2.3E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS05390 5e47dd967719bdb94fda9d09ca78dfb0 375 Gene3D G3DSA:2.60.120.650 1 200 2.9E-40 T 22-04-2016 RMET_RS05390 5e47dd967719bdb94fda9d09ca78dfb0 375 SUPERFAMILY SSF51197 1 285 7.14E-69 T 22-04-2016 RMET_RS05390 5e47dd967719bdb94fda9d09ca78dfb0 375 PANTHER PTHR13096 1 254 8.0E-35 T 22-04-2016 RMET_RS05390 5e47dd967719bdb94fda9d09ca78dfb0 375 Pfam PF08007 Cupin superfamily protein 4 290 3.1E-87 T 22-04-2016 IPR003347 JmjC domain RMET_RS01200 cb7244049b26a104948eb31f531344e0 214 PIRSF PIRSF006324 1 211 1.2E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS01200 cb7244049b26a104948eb31f531344e0 214 Pfam PF01810 LysE type translocator 16 206 4.0E-35 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS01200 cb7244049b26a104948eb31f531344e0 214 PANTHER PTHR30086 1 211 5.1E-71 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS01200 cb7244049b26a104948eb31f531344e0 214 PANTHER PTHR30086:SF14 1 211 5.1E-71 T 22-04-2016 RMET_RS17175 27a06cf169da6a3ec2b3bb48225cdff4 167 PANTHER PTHR10681 1 153 3.0E-12 T 22-04-2016 RMET_RS17175 27a06cf169da6a3ec2b3bb48225cdff4 167 Pfam PF08534 Redoxin 37 155 1.0E-14 T 22-04-2016 IPR013740 Redoxin GO:0016491 RMET_RS17175 27a06cf169da6a3ec2b3bb48225cdff4 167 Gene3D G3DSA:3.40.30.10 8 160 1.2E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS17175 27a06cf169da6a3ec2b3bb48225cdff4 167 PANTHER PTHR10681:SF68 1 153 3.0E-12 T 22-04-2016 RMET_RS17175 27a06cf169da6a3ec2b3bb48225cdff4 167 SUPERFAMILY SSF52833 6 156 2.02E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS00400 5a9ab9c3aecf565949e09e5e72bca5c3 286 SUPERFAMILY SSF47240 5 275 5.99E-50 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS00400 5a9ab9c3aecf565949e09e5e72bca5c3 286 Gene3D G3DSA:1.10.620.20 12 184 1.5E-24 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS08755 faed9e6d67f05965f3f59447bd198485 488 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 456 2.4E-118 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS08755 faed9e6d67f05965f3f59447bd198485 488 PANTHER PTHR30203 12 475 1.1E-87 T 22-04-2016 RMET_RS08755 faed9e6d67f05965f3f59447bd198485 488 Gene3D G3DSA:1.20.1600.10 45 459 1.1E-106 T 22-04-2016 RMET_RS08755 faed9e6d67f05965f3f59447bd198485 488 SUPERFAMILY SSF56954 2 458 1.7E-102 T 22-04-2016 RMET_RS08755 faed9e6d67f05965f3f59447bd198485 488 PANTHER PTHR30203:SF7 12 475 1.1E-87 T 22-04-2016 RMET_RS08755 faed9e6d67f05965f3f59447bd198485 488 Pfam PF02321 Outer membrane efflux protein 56 246 1.1E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS08755 faed9e6d67f05965f3f59447bd198485 488 Pfam PF02321 Outer membrane efflux protein 272 438 4.8E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS13205 b8d4dbc9a6097b036ce61c0473939194 328 SUPERFAMILY SSF56112 5 320 1.9E-69 T 22-04-2016 IPR011009 Protein kinase-like domain RMET_RS13205 b8d4dbc9a6097b036ce61c0473939194 328 Gene3D G3DSA:3.90.1200.10 110 320 4.7E-62 T 22-04-2016 RMET_RS13205 b8d4dbc9a6097b036ce61c0473939194 328 Hamap MF_00301 Homoserine kinase [thrB]. 1 328 166.403 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RMET_RS13205 b8d4dbc9a6097b036ce61c0473939194 328 Gene3D G3DSA:3.30.200.20 1 107 3.6E-39 T 22-04-2016 RMET_RS13205 b8d4dbc9a6097b036ce61c0473939194 328 PANTHER PTHR21064 6 299 3.7E-44 T 22-04-2016 RMET_RS13205 b8d4dbc9a6097b036ce61c0473939194 328 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 316 2.2E-97 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RMET_RS13205 b8d4dbc9a6097b036ce61c0473939194 328 Pfam PF01636 Phosphotransferase enzyme family 27 264 1.7E-26 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RMET_RS05365 8da964431bd913f24bb27d571d7e461a 191 Gene3D G3DSA:3.40.50.150 10 163 6.6E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS05365 8da964431bd913f24bb27d571d7e461a 191 Pfam PF13489 Methyltransferase domain 15 120 7.2E-10 T 22-04-2016 RMET_RS05365 8da964431bd913f24bb27d571d7e461a 191 SUPERFAMILY SSF53335 8 170 5.42E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS17715 13ee18f14e683fbd9acd03be6f5ecefb 241 SUPERFAMILY SSF56925 54 241 3.4E-23 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS17715 13ee18f14e683fbd9acd03be6f5ecefb 241 PANTHER PTHR36920 1 241 9.7E-41 T 22-04-2016 RMET_RS17715 13ee18f14e683fbd9acd03be6f5ecefb 241 PANTHER PTHR36920:SF1 1 241 9.7E-41 T 22-04-2016 RMET_RS17715 13ee18f14e683fbd9acd03be6f5ecefb 241 Gene3D G3DSA:2.40.160.20 24 241 2.4E-64 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS17715 13ee18f14e683fbd9acd03be6f5ecefb 241 Pfam PF03922 OmpW family 38 241 1.5E-35 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RMET_RS17005 60de95255e54d3da5ac1bdf1c43dc6f1 174 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 44 1.1E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17005 60de95255e54d3da5ac1bdf1c43dc6f1 174 SUPERFAMILY SSF54523 25 119 7.06E-11 T 22-04-2016 RMET_RS17005 60de95255e54d3da5ac1bdf1c43dc6f1 174 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 21 101 2.1E-17 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RMET_RS17005 60de95255e54d3da5ac1bdf1c43dc6f1 174 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 21 43 3.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS17005 60de95255e54d3da5ac1bdf1c43dc6f1 174 Gene3D G3DSA:3.55.40.10 59 114 7.2E-4 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RMET_RS28435 c0f5a785dd7c82f4c6a58ea4716676fa 224 SUPERFAMILY SSF52540 2 221 3.82E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS05185 f9310f7ba3c5c5b858b3d492176628f0 64 PIRSF PIRSF039003 1 64 2.0E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RMET_RS05185 f9310f7ba3c5c5b858b3d492176628f0 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 1.9E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RMET_RS05185 f9310f7ba3c5c5b858b3d492176628f0 64 PANTHER PTHR37532 1 64 8.4E-30 T 22-04-2016 RMET_RS05185 f9310f7ba3c5c5b858b3d492176628f0 64 SUPERFAMILY SSF140319 1 62 4.45E-27 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RMET_RS05185 f9310f7ba3c5c5b858b3d492176628f0 64 PANTHER PTHR37532:SF1 1 64 8.4E-30 T 22-04-2016 RMET_RS05185 f9310f7ba3c5c5b858b3d492176628f0 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 4.1E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RMET_RS05185 f9310f7ba3c5c5b858b3d492176628f0 64 Gene3D G3DSA:1.10.10.600 1 63 9.4E-34 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RMET_RS10850 92a6dd9900e0d26ed18971338e07c619 439 Pfam PF14280 Domain of unknown function (DUF4365) 18 145 1.2E-26 T 22-04-2016 IPR025375 Domain of unknown function DUF4365 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 SUPERFAMILY SSF56059 1 238 2.3E-85 T 22-04-2016 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 Pfam PF08442 ATP-grasp domain 2 202 3.1E-80 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 SUPERFAMILY SSF52210 241 384 2.35E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 Pfam PF00549 CoA-ligase 262 382 8.5E-25 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 Gene3D G3DSA:3.30.470.20 96 239 3.2E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.0E-159 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 Gene3D G3DSA:3.30.1490.20 22 95 1.6E-36 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 PIRSF PIRSF001554 1 388 1.4E-153 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.908 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 Gene3D G3DSA:3.40.50.261 242 383 4.8E-65 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RMET_RS02375 75894fee27077c2234a8e82f9b469470 388 PANTHER PTHR11815 1 388 3.5E-229 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 SUPERFAMILY SSF56281 2 265 3.52E-66 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 265 2.4E-94 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 SMART SM00849 12 178 2.8E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 Gene3D G3DSA:3.60.15.10 3 265 2.1E-82 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 265 42.921 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 Pfam PF00753 Metallo-beta-lactamase superfamily 14 178 1.6E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 PANTHER PTHR11935:SF7 1 266 3.0E-85 T 22-04-2016 RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 179 265 7.9E-24 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 PIRSF PIRSF005457 1 265 4.3E-97 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RMET_RS11075 7e2bb13ecf3c4f374e57b05476145f62 266 PANTHER PTHR11935 1 266 3.0E-85 T 22-04-2016 RMET_RS31710 648af740fd99a031867c8b87ffd60c44 67 SUPERFAMILY SSF56784 1 66 1.83E-10 T 22-04-2016 IPR023214 HAD-like domain RMET_RS31710 648af740fd99a031867c8b87ffd60c44 67 Gene3D G3DSA:3.40.50.1000 1 48 1.3E-6 T 22-04-2016 IPR023214 HAD-like domain RMET_RS31710 648af740fd99a031867c8b87ffd60c44 67 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 34 1.2E-6 T 22-04-2016 IPR023214 HAD-like domain RMET_RS15635 36431d7bedd982514f8a600ba8f9ae7f 168 PANTHER PTHR10430 2 167 5.1E-75 T 22-04-2016 RMET_RS15635 36431d7bedd982514f8a600ba8f9ae7f 168 SUPERFAMILY SSF52833 1 166 8.3E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15635 36431d7bedd982514f8a600ba8f9ae7f 168 Gene3D G3DSA:3.40.30.10 1 167 2.3E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS15635 36431d7bedd982514f8a600ba8f9ae7f 168 Pfam PF08534 Redoxin 5 163 1.5E-36 T 22-04-2016 IPR013740 Redoxin GO:0016491 RMET_RS08910 6a31a6de7b41f25653d014aff6b83310 387 Gene3D G3DSA:3.40.50.300 4 210 2.5E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08910 6a31a6de7b41f25653d014aff6b83310 387 Pfam PF01637 ATPase domain predominantly from Archaea 24 169 2.9E-8 T 22-04-2016 IPR011579 ATPase domain GO:0005524 RMET_RS08910 6a31a6de7b41f25653d014aff6b83310 387 SUPERFAMILY SSF52540 3 273 2.23E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 221 1.3E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 1.2E-29 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 PANTHER PTHR10909:SF227 1 388 5.2E-206 T 22-04-2016 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 SUPERFAMILY SSF47203 231 380 1.77E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 SUPERFAMILY SSF56645 2 245 6.28E-76 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 Gene3D G3DSA:1.20.140.10 223 380 6.4E-54 T 22-04-2016 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 PANTHER PTHR10909 1 388 5.2E-206 T 22-04-2016 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 Gene3D G3DSA:1.10.540.10 3 119 1.3E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 380 5.2E-38 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS08630 b181dfb0af44c4ac60c21830029a5535 388 Gene3D G3DSA:2.40.110.10 122 222 4.3E-36 T 22-04-2016 RMET_RS19230 ca40a0a4bebefdac6f3ba8fc0b242641 271 SUPERFAMILY SSF103190 13 145 1.1E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RMET_RS19230 ca40a0a4bebefdac6f3ba8fc0b242641 271 Gene3D G3DSA:3.30.450.20 50 140 3.4E-5 T 22-04-2016 RMET_RS19230 ca40a0a4bebefdac6f3ba8fc0b242641 271 Pfam PF02743 Cache domain 6 192 1.3E-15 T 22-04-2016 IPR033479 Double Cache domain 1 RMET_RS10230 0dde19c9578cda851bb142cfbc0d82e1 48 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 1.5E-16 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RMET_RS10230 0dde19c9578cda851bb142cfbc0d82e1 48 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 4.3E-20 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RMET_RS06910 bc22a196d49421923d28de0dfeb5bb26 387 PANTHER PTHR30011 1 382 2.0E-190 T 22-04-2016 RMET_RS06910 bc22a196d49421923d28de0dfeb5bb26 387 Gene3D G3DSA:3.20.20.30 1 363 1.0E-105 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS06910 bc22a196d49421923d28de0dfeb5bb26 387 PANTHER PTHR30011:SF1 1 382 2.0E-190 T 22-04-2016 RMET_RS06910 bc22a196d49421923d28de0dfeb5bb26 387 SUPERFAMILY SSF51679 1 357 1.44E-97 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS06910 bc22a196d49421923d28de0dfeb5bb26 387 Pfam PF00296 Luciferase-like monooxygenase 1 331 1.9E-89 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RMET_RS06910 bc22a196d49421923d28de0dfeb5bb26 387 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 355 6.8E-190 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RMET_RS06910 bc22a196d49421923d28de0dfeb5bb26 387 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 386 69.73 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 377 47.732 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 SUPERFAMILY SSF52317 156 375 3.7E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 6.2E-10 T 22-04-2016 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 6.2E-10 T 22-04-2016 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 6.2E-10 T 22-04-2016 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 SUPERFAMILY SSF52021 7 152 1.03E-56 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 Gene3D G3DSA:3.50.30.20 8 145 4.2E-61 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 Pfam PF00117 Glutamine amidotransferase class-I 196 371 1.1E-46 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 SMART SM01097 6 136 1.2E-88 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 1.9E-38 T 22-04-2016 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 1.9E-38 T 22-04-2016 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 1.9E-38 T 22-04-2016 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 1.9E-38 T 22-04-2016 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 1.9E-38 T 22-04-2016 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 374 3.3E-144 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 Gene3D G3DSA:3.40.50.880 156 376 3.4E-80 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 3.3E-52 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RMET_RS11020 2d123aa9a7a13ef06ca8dac455dcee95 382 PANTHER PTHR11405 6 378 1.9E-226 T 22-04-2016 RMET_RS17250 023f79dd6c880d52c6ae20ed92116dc4 216 SMART SM00849 12 192 2.9E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS17250 023f79dd6c880d52c6ae20ed92116dc4 216 Gene3D G3DSA:3.60.15.10 5 209 4.0E-57 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS17250 023f79dd6c880d52c6ae20ed92116dc4 216 SUPERFAMILY SSF56281 6 208 2.1E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS17250 023f79dd6c880d52c6ae20ed92116dc4 216 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 8.9E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS17250 023f79dd6c880d52c6ae20ed92116dc4 216 PANTHER PTHR11935 1 216 3.5E-109 T 22-04-2016 RMET_RS17250 023f79dd6c880d52c6ae20ed92116dc4 216 PANTHER PTHR11935:SF115 1 216 3.5E-109 T 22-04-2016 RMET_RS31845 34fb6005f19ebd877abfe456ad405c36 123 SUPERFAMILY SSF89796 2 122 4.45E-37 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS31845 34fb6005f19ebd877abfe456ad405c36 123 Gene3D G3DSA:3.40.50.10540 2 122 4.1E-36 T 22-04-2016 IPR023606 CoA-transferase family III domain RMET_RS31845 34fb6005f19ebd877abfe456ad405c36 123 Pfam PF02515 CoA-transferase family III 2 122 2.0E-36 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RMET_RS31845 34fb6005f19ebd877abfe456ad405c36 123 PANTHER PTHR24023 1 99 2.4E-15 T 22-04-2016 RMET_RS31845 34fb6005f19ebd877abfe456ad405c36 123 PANTHER PTHR24023:SF593 1 99 2.4E-15 T 22-04-2016 RMET_RS15805 f15ef76ed6333a38cb31837594da458a 325 Gene3D G3DSA:1.10.3720.10 90 316 2.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15805 f15ef76ed6333a38cb31837594da458a 325 PANTHER PTHR30465:SF0 1 320 3.4E-108 T 22-04-2016 RMET_RS15805 f15ef76ed6333a38cb31837594da458a 325 SUPERFAMILY SSF161098 90 305 8.18E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15805 f15ef76ed6333a38cb31837594da458a 325 PANTHER PTHR30465 1 320 3.4E-108 T 22-04-2016 RMET_RS15805 f15ef76ed6333a38cb31837594da458a 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 4.7E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS03185 d2ad23c61766dbf873b0edc279f68871 84 PANTHER PTHR37465:SF1 3 84 3.1E-13 T 22-04-2016 RMET_RS03185 d2ad23c61766dbf873b0edc279f68871 84 PANTHER PTHR37465 3 84 3.1E-13 T 22-04-2016 RMET_RS03185 d2ad23c61766dbf873b0edc279f68871 84 Pfam PF05488 PAAR motif 8 81 1.1E-22 T 22-04-2016 IPR008727 PAAR motif RMET_RS17220 ee2804c200cabc4b755102d38add1e6b 125 SUPERFAMILY SSF46626 55 124 1.07E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17220 ee2804c200cabc4b755102d38add1e6b 125 Gene3D G3DSA:1.10.760.10 51 124 5.2E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17220 ee2804c200cabc4b755102d38add1e6b 125 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 52 120 3.4E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS13595 7c3754dcebf00785dd6c27a713e1da8c 99 PANTHER PTHR36931 7 90 2.3E-30 T 22-04-2016 RMET_RS17235 9f29dd413962848f2cf249a1b5b1a8b3 146 PANTHER PTHR34039:SF1 17 134 2.2E-36 T 22-04-2016 RMET_RS17235 9f29dd413962848f2cf249a1b5b1a8b3 146 PANTHER PTHR34039 17 134 2.2E-36 T 22-04-2016 RMET_RS17235 9f29dd413962848f2cf249a1b5b1a8b3 146 SUPERFAMILY SSF52980 23 128 2.55E-17 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RMET_RS17235 9f29dd413962848f2cf249a1b5b1a8b3 146 Gene3D G3DSA:3.40.1350.10 28 132 7.0E-35 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RMET_RS17235 9f29dd413962848f2cf249a1b5b1a8b3 146 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 21 131 4.2E-25 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RMET_RS17235 9f29dd413962848f2cf249a1b5b1a8b3 146 Pfam PF02021 Uncharacterised protein family UPF0102 28 117 1.0E-26 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RMET_RS17235 9f29dd413962848f2cf249a1b5b1a8b3 146 Hamap MF_00048 UPF0102 protein YraN [yraN]. 21 131 22.575 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RMET_RS12985 7c383f0158782aa23cd8884f68b8fe19 337 PANTHER PTHR30349 10 334 2.9E-89 T 22-04-2016 RMET_RS12985 7c383f0158782aa23cd8884f68b8fe19 337 PIRSF PIRSF017082 6 337 3.4E-81 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS12985 7c383f0158782aa23cd8884f68b8fe19 337 SUPERFAMILY SSF53850 125 297 1.55E-11 T 22-04-2016 RMET_RS12985 7c383f0158782aa23cd8884f68b8fe19 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 333 3.4E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS12985 7c383f0158782aa23cd8884f68b8fe19 337 PANTHER PTHR30349:SF16 10 334 2.9E-89 T 22-04-2016 RMET_RS02345 9837caab38de584179604d11e5db50c1 106 Pfam PF13937 Domain of unknown function (DUF4212) 17 86 1.1E-25 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted RMET_RS02345 9837caab38de584179604d11e5db50c1 106 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 16 86 9.4E-30 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted RMET_RS03920 30aea2ee9cb5cad98c294f8fbd9ce39d 256 Pfam PF02410 Ribosomal silencing factor during starvation 17 112 7.0E-25 T 22-04-2016 RMET_RS03920 30aea2ee9cb5cad98c294f8fbd9ce39d 256 PANTHER PTHR21043 7 114 6.1E-33 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RMET_RS03920 30aea2ee9cb5cad98c294f8fbd9ce39d 256 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 8 113 22.861 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RMET_RS03920 30aea2ee9cb5cad98c294f8fbd9ce39d 256 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 16 112 5.0E-32 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RMET_RS03920 30aea2ee9cb5cad98c294f8fbd9ce39d 256 Gene3D G3DSA:3.30.460.10 10 115 9.7E-36 T 22-04-2016 RMET_RS03920 30aea2ee9cb5cad98c294f8fbd9ce39d 256 SUPERFAMILY SSF81301 9 117 8.5E-35 T 22-04-2016 RMET_RS14540 32fb1c490fe84a888a418a79e6e142cb 103 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 10 103 28.79 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 RMET_RS14540 32fb1c490fe84a888a418a79e6e142cb 103 Gene3D G3DSA:2.60.120.10 10 102 2.2E-39 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS14540 32fb1c490fe84a888a418a79e6e142cb 103 PANTHER PTHR36540 2 102 2.5E-33 T 22-04-2016 RMET_RS14540 32fb1c490fe84a888a418a79e6e142cb 103 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 9.0E-39 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 RMET_RS14540 32fb1c490fe84a888a418a79e6e142cb 103 SUPERFAMILY SSF51182 10 102 4.21E-36 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS14540 32fb1c490fe84a888a418a79e6e142cb 103 PANTHER PTHR36540:SF1 2 102 2.5E-33 T 22-04-2016 RMET_RS06295 ee7f7f63279f1f2521560e6a2eea137b 101 SMART SM00530 10 63 1.1E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS06295 ee7f7f63279f1f2521560e6a2eea137b 101 Gene3D G3DSA:1.10.260.40 5 67 2.5E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS06295 ee7f7f63279f1f2521560e6a2eea137b 101 Pfam PF13560 Helix-turn-helix domain 7 58 1.1E-6 T 22-04-2016 RMET_RS06295 ee7f7f63279f1f2521560e6a2eea137b 101 SUPERFAMILY SSF47413 7 66 2.28E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS04475 24e57cabf0baf6547156e1d5dc12308d 393 PANTHER PTHR19353:SF24 62 351 7.1E-31 T 22-04-2016 RMET_RS04475 24e57cabf0baf6547156e1d5dc12308d 393 Pfam PF00487 Fatty acid desaturase 91 348 1.2E-31 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RMET_RS04475 24e57cabf0baf6547156e1d5dc12308d 393 PANTHER PTHR19353 62 351 7.1E-31 T 22-04-2016 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 SUPERFAMILY SSF51905 263 350 5.81E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 SUPERFAMILY SSF51905 10 164 5.81E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 PANTHER PTHR10617 9 309 8.4E-30 T 22-04-2016 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 Gene3D G3DSA:3.30.9.10 160 310 1.5E-20 T 22-04-2016 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 267 282 2.9E-13 T 22-04-2016 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 2.9E-13 T 22-04-2016 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 2.9E-13 T 22-04-2016 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 Pfam PF12831 FAD dependent oxidoreductase 11 133 1.6E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 Gene3D G3DSA:3.40.50.720 94 159 6.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 Gene3D G3DSA:3.40.50.720 10 51 6.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS08315 c2c17dcb87cfe994403de1852a38fad5 370 Pfam PF01494 FAD binding domain 143 311 2.7E-7 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RMET_RS10625 7b511b8c13b41a4c518bf34643535e6d 347 SUPERFAMILY SSF53850 36 287 3.15E-47 T 22-04-2016 RMET_RS10625 7b511b8c13b41a4c518bf34643535e6d 347 SMART SM00062 37 278 0.0022 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RMET_RS10625 7b511b8c13b41a4c518bf34643535e6d 347 PANTHER PTHR30024:SF8 1 277 5.0E-61 T 22-04-2016 RMET_RS10625 7b511b8c13b41a4c518bf34643535e6d 347 PANTHER PTHR30024 1 277 5.0E-61 T 22-04-2016 RMET_RS10625 7b511b8c13b41a4c518bf34643535e6d 347 Pfam PF13379 NMT1-like family 32 265 1.4E-27 T 22-04-2016 RMET_RS10625 7b511b8c13b41a4c518bf34643535e6d 347 Gene3D G3DSA:3.40.190.10 55 141 1.8E-5 T 22-04-2016 RMET_RS10625 7b511b8c13b41a4c518bf34643535e6d 347 Gene3D G3DSA:3.40.190.10 142 255 1.6E-22 T 22-04-2016 RMET_RS15280 0dc41ce630b581efa9c538aef1b6f508 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 157 3.0E-46 T 22-04-2016 IPR008136 CinA, C-terminal RMET_RS15280 0dc41ce630b581efa9c538aef1b6f508 165 SUPERFAMILY SSF142433 9 162 4.84E-56 T 22-04-2016 IPR008136 CinA, C-terminal RMET_RS15280 0dc41ce630b581efa9c538aef1b6f508 165 Gene3D G3DSA:3.90.950.20 8 163 6.1E-60 T 22-04-2016 IPR008136 CinA, C-terminal RMET_RS15280 0dc41ce630b581efa9c538aef1b6f508 165 Pfam PF02464 Competence-damaged protein 8 160 7.0E-59 T 22-04-2016 IPR008136 CinA, C-terminal RMET_RS15280 0dc41ce630b581efa9c538aef1b6f508 165 PANTHER PTHR13939 7 165 5.0E-62 T 22-04-2016 RMET_RS01550 77b30116612b9a86258a8722a3c15661 214 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 34 190 1.8E-34 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RMET_RS01550 77b30116612b9a86258a8722a3c15661 214 PANTHER PTHR36504 8 206 2.5E-13 T 22-04-2016 RMET_RS01550 77b30116612b9a86258a8722a3c15661 214 Gene3D G3DSA:2.60.450.10 35 187 6.2E-32 T 22-04-2016 RMET_RS01550 77b30116612b9a86258a8722a3c15661 214 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 16 191 24.934 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RMET_RS01550 77b30116612b9a86258a8722a3c15661 214 Pfam PF03968 OstA-like protein 45 164 5.4E-25 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 Gene3D G3DSA:1.10.10.10 19 96 5.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 Pfam PF01614 Bacterial transcriptional regulator 148 267 8.9E-11 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 SMART SM00346 26 116 6.6E-19 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 PANTHER PTHR30136 2 267 2.8E-58 T 22-04-2016 RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 SUPERFAMILY SSF55781 93 268 5.82E-32 T 22-04-2016 IPR029016 GAF domain-like RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 PANTHER PTHR30136:SF4 2 267 2.8E-58 T 22-04-2016 RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 Gene3D G3DSA:3.30.450.40 97 268 2.1E-32 T 22-04-2016 IPR029016 GAF domain-like RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 Pfam PF09339 IclR helix-turn-helix domain 28 79 5.6E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS13330 12f6a5576142711a0c9a6946f8493789 274 SUPERFAMILY SSF46785 26 99 1.36E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PIRSF PIRSF000904 3 350 6.4E-119 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 Gene3D G3DSA:3.40.190.80 209 346 1.7E-53 T 22-04-2016 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 Gene3D G3DSA:3.30.540.10 7 207 5.8E-69 T 22-04-2016 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 SUPERFAMILY SSF56655 6 344 3.5E-105 T 22-04-2016 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 7 346 45.652 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PANTHER PTHR11556 8 361 2.4E-153 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 161 184 1.0E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 218 245 1.0E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 320 345 1.0E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 32 59 1.0E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 75 101 1.0E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 192 215 1.0E-60 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 8 206 2.2E-53 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 286 298 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 RMET_RS07600 254bb1b8055da4af95b288e94f85f122 365 PIRSF PIRSF500210 4 349 5.5E-122 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RMET_RS05205 38fc0297410424482372442424614eb2 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 196 0.0062 T 22-04-2016 RMET_RS05205 38fc0297410424482372442424614eb2 256 SUPERFAMILY SSF51735 11 245 3.69E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05205 38fc0297410424482372442424614eb2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05205 38fc0297410424482372442424614eb2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05205 38fc0297410424482372442424614eb2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05205 38fc0297410424482372442424614eb2 256 PANTHER PTHR24322 161 196 9.0E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05205 38fc0297410424482372442424614eb2 256 PANTHER PTHR24322 14 144 9.0E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS05205 38fc0297410424482372442424614eb2 256 Gene3D G3DSA:3.40.50.720 11 244 6.7E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS05205 38fc0297410424482372442424614eb2 256 Pfam PF00106 short chain dehydrogenase 13 207 2.0E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 207 225 3.8E-31 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 326 348 3.8E-31 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 50 69 3.8E-31 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 313 3.8E-31 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 3.8E-31 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 49 362 1.7E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 SUPERFAMILY SSF55424 380 491 1.03E-24 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 Gene3D G3DSA:3.50.50.60 174 371 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 SUPERFAMILY SSF51905 43 373 5.65E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PIRSF PIRSF000350 2 491 1.4E-75 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 Gene3D G3DSA:3.30.390.30 382 491 8.2E-29 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PANTHER PTHR22912:SF106 34 491 2.0E-138 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 Gene3D G3DSA:3.50.50.60 47 173 3.7E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 382 491 2.2E-19 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 82 92 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 348 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 447 462 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 81 96 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 207 232 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 469 489 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 182 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 399 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 71 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 312 5.8E-61 T 22-04-2016 RMET_RS17850 d9778886a0aa80cc11d295628cb16e9d 493 PANTHER PTHR22912 34 491 2.0E-138 T 22-04-2016 RMET_RS01215 8a4a201a35ad638618eaf270c3b193a5 266 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 38 266 1.9E-82 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RMET_RS01215 8a4a201a35ad638618eaf270c3b193a5 266 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 19 266 7.6E-61 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 45 68 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 SUPERFAMILY SSF53244 293 430 2.75E-30 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 Gene3D G3DSA:3.90.190.20 295 430 4.3E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 PIRSF PIRSF001563 2 436 2.1E-108 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 SUPERFAMILY SSF53623 6 291 2.49E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 PANTHER PTHR11136 10 430 3.8E-114 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 Gene3D G3DSA:3.40.1190.10 7 293 1.8E-89 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 430 5.5E-101 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RMET_RS12360 85eac99fa7cfd5c8613e1ba7368c8189 436 Pfam PF08245 Mur ligase middle domain 47 269 4.0E-10 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RMET_RS04060 0ceeb6f2006233baf6ae178edb0b2984 198 Gene3D G3DSA:2.20.70.10 4 36 6.8E-5 T 22-04-2016 RMET_RS04060 0ceeb6f2006233baf6ae178edb0b2984 198 Gene3D G3DSA:3.90.79.10 42 143 9.7E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS04060 0ceeb6f2006233baf6ae178edb0b2984 198 PANTHER PTHR22769 3 143 3.1E-20 T 22-04-2016 RMET_RS04060 0ceeb6f2006233baf6ae178edb0b2984 198 SUPERFAMILY SSF55811 5 162 2.71E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS04060 0ceeb6f2006233baf6ae178edb0b2984 198 Pfam PF14803 Nudix N-terminal 5 36 3.4E-6 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- RMET_RS04060 0ceeb6f2006233baf6ae178edb0b2984 198 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RMET_RS04060 0ceeb6f2006233baf6ae178edb0b2984 198 Pfam PF00293 NUDIX domain 46 142 4.3E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS24325 47a589256aea18d3b3b11eb90083f7d3 274 Pfam PF10134 Replication initiator protein A 39 268 2.6E-92 T 22-04-2016 IPR018777 Replication initiator protein A RMET_RS02875 f139694cb3e05044bfd5feea42f61b1a 240 Pfam PF00005 ABC transporter 28 168 2.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS02875 f139694cb3e05044bfd5feea42f61b1a 240 PANTHER PTHR24220 31 224 7.1E-69 T 22-04-2016 RMET_RS02875 f139694cb3e05044bfd5feea42f61b1a 240 SUPERFAMILY SSF52540 17 225 8.05E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02875 f139694cb3e05044bfd5feea42f61b1a 240 Gene3D G3DSA:3.40.50.300 29 225 1.8E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS02875 f139694cb3e05044bfd5feea42f61b1a 240 SMART SM00382 27 226 1.7E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS17505 32c1ef5d03c8e7758f92c72450412d2a 458 SUPERFAMILY SSF143548 17 157 7.06E-46 T 22-04-2016 IPR029009 Allosteric substrate binding domain RMET_RS17505 32c1ef5d03c8e7758f92c72450412d2a 458 Pfam PF03313 Serine dehydratase alpha chain 188 452 1.1E-105 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit RMET_RS17505 32c1ef5d03c8e7758f92c72450412d2a 458 PANTHER PTHR30182 3 456 3.6E-238 T 22-04-2016 RMET_RS17505 32c1ef5d03c8e7758f92c72450412d2a 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 455 1.7E-213 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RMET_RS17505 32c1ef5d03c8e7758f92c72450412d2a 458 PANTHER PTHR30182:SF1 3 456 3.6E-238 T 22-04-2016 RMET_RS17505 32c1ef5d03c8e7758f92c72450412d2a 458 Gene3D G3DSA:3.30.1330.90 11 157 3.9E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain RMET_RS17505 32c1ef5d03c8e7758f92c72450412d2a 458 Pfam PF03315 Serine dehydratase beta chain 4 156 1.1E-57 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RMET_RS04710 5b460216e41f7eabe252352e22f48cc5 213 PANTHER PTHR33269:SF1 1 197 3.1E-60 T 22-04-2016 RMET_RS04710 5b460216e41f7eabe252352e22f48cc5 213 PANTHER PTHR33269 1 197 3.1E-60 T 22-04-2016 RMET_RS04710 5b460216e41f7eabe252352e22f48cc5 213 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 166 5.1E-37 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 RMET_RS16525 b691d3d74527cf0daf6efd3abb1d18c2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 22-04-2016 RMET_RS16525 b691d3d74527cf0daf6efd3abb1d18c2 38 PANTHER PTHR18804 1 38 6.6E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16525 b691d3d74527cf0daf6efd3abb1d18c2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16525 b691d3d74527cf0daf6efd3abb1d18c2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.6E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16525 b691d3d74527cf0daf6efd3abb1d18c2 38 SUPERFAMILY SSF57840 1 38 6.28E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16525 b691d3d74527cf0daf6efd3abb1d18c2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.765 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16525 b691d3d74527cf0daf6efd3abb1d18c2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.5E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS06195 b01e79d91b4225c132b6138881c15357 288 PANTHER PTHR11795:SF404 9 287 3.0E-91 T 22-04-2016 RMET_RS06195 b01e79d91b4225c132b6138881c15357 288 PANTHER PTHR11795 9 287 3.0E-91 T 22-04-2016 RMET_RS06195 b01e79d91b4225c132b6138881c15357 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 277 2.7E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS12755 d4ebc5a5996bcaddbc756728257e71f2 109 PANTHER PTHR30561:SF1 1 109 8.2E-49 T 22-04-2016 RMET_RS12755 d4ebc5a5996bcaddbc756728257e71f2 109 SUPERFAMILY SSF103481 6 106 1.05E-19 T 22-04-2016 RMET_RS12755 d4ebc5a5996bcaddbc756728257e71f2 109 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.4E-26 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 RMET_RS12755 d4ebc5a5996bcaddbc756728257e71f2 109 PANTHER PTHR30561 1 109 8.2E-49 T 22-04-2016 RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 PANTHER PTHR23508 212 309 1.8E-82 T 22-04-2016 RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 Gene3D G3DSA:1.20.1250.20 210 305 5.6E-23 T 22-04-2016 RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 Gene3D G3DSA:1.20.1250.20 3 90 5.6E-23 T 22-04-2016 RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 PANTHER PTHR23508 1 92 1.8E-82 T 22-04-2016 RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 Pfam PF00083 Sugar (and other) transporter 201 308 6.7E-6 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 PANTHER PTHR23508:SF7 1 92 1.8E-82 T 22-04-2016 RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 PANTHER PTHR23508:SF7 212 309 1.8E-82 T 22-04-2016 RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 SUPERFAMILY SSF103473 214 307 2.79E-18 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS20380 4b881d01ad29cf17c49fa6496c8a24fb 311 SUPERFAMILY SSF103473 2 91 2.79E-18 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 SUPERFAMILY SSF56235 60 640 4.63E-139 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PANTHER PTHR11686 49 645 2.0E-201 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PANTHER PTHR11686:SF27 49 645 2.0E-201 T 22-04-2016 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 441 459 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 500 515 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 295 311 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 530 547 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 324 343 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 187 206 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 169 187 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 481 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 91 116 2.0E-55 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09810 12325c87f4e3690dbd7fb54d0ff7ae6c 645 Pfam PF01019 Gamma-glutamyltranspeptidase 84 636 3.6E-135 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 2.4E-33 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 PANTHER PTHR23309 1 284 9.4E-137 T 22-04-2016 RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 SUPERFAMILY SSF48179 185 284 4.0E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 Gene3D G3DSA:3.40.50.720 2 187 2.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 PIRSF PIRSF000105 1 284 1.3E-84 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 3.6E-64 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 SUPERFAMILY SSF51735 1 185 6.05E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RMET_RS01080 cd02872c7118f6e37a8cd0a859387c08 284 Gene3D G3DSA:1.10.1040.10 188 283 1.2E-34 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS03860 22ab78bb7597f06cbfcaef1449d42575 244 PIRSF PIRSF033328 6 234 3.3E-46 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 RMET_RS03860 22ab78bb7597f06cbfcaef1449d42575 244 Pfam PF06299 Protein of unknown function (DUF1045) 61 221 1.6E-53 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 RMET_RS03860 22ab78bb7597f06cbfcaef1449d42575 244 TIGRFAM TIGR03223 Phn_opern_protn: putative phosphonate metabolism protein 6 230 8.5E-75 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PANTHER PTHR39083 74 450 2.7E-87 T 22-04-2016 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PANTHER PTHR39083 609 764 2.7E-87 T 22-04-2016 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PANTHER PTHR39083 467 591 2.7E-87 T 22-04-2016 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 178 199 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 220 243 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 87 108 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 466 485 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 514 533 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 300 321 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 136 159 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 383 404 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PRINTS PR01440 Cellulose synthase subunit B signature 551 571 7.0E-42 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PANTHER PTHR39083:SF1 74 450 2.7E-87 T 22-04-2016 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PANTHER PTHR39083:SF1 609 764 2.7E-87 T 22-04-2016 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 PANTHER PTHR39083:SF1 467 591 2.7E-87 T 22-04-2016 RMET_RS11295 fcbf8766b6eeec0551e7dce3b4a4def2 767 Pfam PF03170 Bacterial cellulose synthase subunit 59 671 6.9E-207 T 22-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 RMET_RS13585 30adb952104b5627319c8efa2e99726b 293 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 284 18.377 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RMET_RS13585 30adb952104b5627319c8efa2e99726b 293 Pfam PF02673 Bacitracin resistance protein BacA 9 279 2.2E-83 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RMET_RS13585 30adb952104b5627319c8efa2e99726b 293 PANTHER PTHR30622:SF3 2 136 7.6E-124 T 22-04-2016 RMET_RS13585 30adb952104b5627319c8efa2e99726b 293 PANTHER PTHR30622:SF3 156 292 7.6E-124 T 22-04-2016 RMET_RS13585 30adb952104b5627319c8efa2e99726b 293 PANTHER PTHR30622 2 136 7.6E-124 T 22-04-2016 RMET_RS13585 30adb952104b5627319c8efa2e99726b 293 PANTHER PTHR30622 156 292 7.6E-124 T 22-04-2016 RMET_RS11545 5f6ae5c523287cd452f0d124f689705b 211 Gene3D G3DSA:1.20.1510.10 23 202 1.1E-18 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RMET_RS11545 5f6ae5c523287cd452f0d124f689705b 211 SUPERFAMILY SSF161111 23 202 6.54E-30 T 22-04-2016 RMET_RS11545 5f6ae5c523287cd452f0d124f689705b 211 PANTHER PTHR11562 1 203 8.3E-13 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS11545 5f6ae5c523287cd452f0d124f689705b 211 Pfam PF01545 Cation efflux family 28 202 2.4E-12 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 332 354 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 17 415 3.4E-146 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 9 425 40.922 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 Pfam PF00171 Aldehyde dehydrogenase family 316 382 4.9E-7 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 Pfam PF00171 Aldehyde dehydrogenase family 13 278 7.2E-18 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 Gene3D G3DSA:3.40.605.10 384 425 6.5E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 Gene3D G3DSA:3.40.605.10 6 228 6.5E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 Gene3D G3DSA:3.40.309.10 230 383 9.0E-42 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 PANTHER PTHR11063:SF8 8 425 8.1E-171 T 22-04-2016 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 SUPERFAMILY SSF53720 9 425 5.11E-116 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 PIRSF PIRSF000151 2 426 8.2E-170 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RMET_RS14890 f068df29c4e6e54d664204b197c59ef3 426 PANTHER PTHR11063 8 425 8.1E-171 T 22-04-2016 RMET_RS13930 a59cf9bea6fc678698483e6fc0bf8f72 393 Pfam PF03929 PepSY-associated TM region 12 377 3.7E-54 T 22-04-2016 IPR005625 PepSY-associated TM protein RMET_RS13930 a59cf9bea6fc678698483e6fc0bf8f72 393 PANTHER PTHR34219 1 378 2.2E-52 T 22-04-2016 RMET_RS13930 a59cf9bea6fc678698483e6fc0bf8f72 393 Pfam PF03413 Peptidase propeptide and YPEB domain 261 322 3.2E-7 T 22-04-2016 IPR025711 PepSY domain RMET_RS04995 2ab109038b33af1e6e23dd096cce53c6 1398 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 36 1384 1.8E-201 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 RMET_RS04995 2ab109038b33af1e6e23dd096cce53c6 1398 Pfam PF13116 Protein of unknown function 584 878 6.8E-46 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 RMET_RS04995 2ab109038b33af1e6e23dd096cce53c6 1398 Pfam PF13502 AsmA-like C-terminal region 1117 1376 3.5E-65 T 22-04-2016 IPR032712 AsmA-like, C-terminal RMET_RS04995 2ab109038b33af1e6e23dd096cce53c6 1398 PANTHER PTHR38690 29 654 2.4E-120 T 22-04-2016 RMET_RS04995 2ab109038b33af1e6e23dd096cce53c6 1398 PANTHER PTHR38690 670 1395 2.4E-120 T 22-04-2016 RMET_RS03610 b4e3b98f0ff79334dfbd48c11d4c1a28 302 SUPERFAMILY SSF51735 12 178 2.56E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03610 b4e3b98f0ff79334dfbd48c11d4c1a28 302 PANTHER PTHR21363 1 294 1.6E-62 T 22-04-2016 RMET_RS03610 b4e3b98f0ff79334dfbd48c11d4c1a28 302 PANTHER PTHR21363:SF0 1 294 1.6E-62 T 22-04-2016 RMET_RS03610 b4e3b98f0ff79334dfbd48c11d4c1a28 302 SUPERFAMILY SSF48179 183 288 4.53E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS03610 b4e3b98f0ff79334dfbd48c11d4c1a28 302 Pfam PF02153 Prephenate dehydrogenase 25 280 4.9E-68 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RMET_RS03610 b4e3b98f0ff79334dfbd48c11d4c1a28 302 Gene3D G3DSA:3.40.50.720 8 188 1.0E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS06315 81a699a2aa7f7669f7eab3c8198dcccd 93 SUPERFAMILY SSF46955 21 77 8.42E-9 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS06315 81a699a2aa7f7669f7eab3c8198dcccd 93 Gene3D G3DSA:1.10.10.10 21 77 1.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06315 81a699a2aa7f7669f7eab3c8198dcccd 93 Pfam PF12728 Helix-turn-helix domain 22 72 9.7E-10 T 22-04-2016 RMET_RS14080 987c9dffc12a316740435868bdedf3c3 144 SUPERFAMILY SSF102400 1 136 8.5E-41 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RMET_RS14080 987c9dffc12a316740435868bdedf3c3 144 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 132 1.2E-37 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RMET_RS14080 987c9dffc12a316740435868bdedf3c3 144 Gene3D G3DSA:3.40.50.10110 1 136 1.7E-40 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RMET_RS14080 987c9dffc12a316740435868bdedf3c3 144 PANTHER PTHR38767 7 139 1.3E-24 T 22-04-2016 RMET_RS12015 e7e3d75a03dc0ee701ac4b351d695cf5 257 Pfam PF13098 Thioredoxin-like domain 123 250 1.6E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12015 e7e3d75a03dc0ee701ac4b351d695cf5 257 PANTHER PTHR35272 31 257 4.1E-63 T 22-04-2016 RMET_RS12015 e7e3d75a03dc0ee701ac4b351d695cf5 257 Gene3D G3DSA:3.40.30.10 114 254 5.9E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12015 e7e3d75a03dc0ee701ac4b351d695cf5 257 SUPERFAMILY SSF54423 30 87 2.82E-11 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RMET_RS12015 e7e3d75a03dc0ee701ac4b351d695cf5 257 SUPERFAMILY SSF52833 96 254 1.15E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS12015 e7e3d75a03dc0ee701ac4b351d695cf5 257 PANTHER PTHR35272:SF2 31 257 4.1E-63 T 22-04-2016 RMET_RS01585 d786538709be76b385678addb635b275 558 PANTHER PTHR10010 310 382 1.3E-30 T 22-04-2016 RMET_RS01585 d786538709be76b385678addb635b275 558 PANTHER PTHR10010 1 142 1.3E-30 T 22-04-2016 RMET_RS01585 d786538709be76b385678addb635b275 558 Pfam PF01895 PhoU domain 340 422 1.9E-11 T 22-04-2016 IPR026022 PhoU domain RMET_RS01585 d786538709be76b385678addb635b275 558 Gene3D G3DSA:1.20.58.220 328 422 2.6E-13 T 22-04-2016 RMET_RS01585 d786538709be76b385678addb635b275 558 Gene3D G3DSA:1.20.58.220 443 519 4.8E-4 T 22-04-2016 RMET_RS01585 d786538709be76b385678addb635b275 558 Pfam PF02690 Na+/Pi-cotransporter 158 282 1.5E-10 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 RMET_RS01585 d786538709be76b385678addb635b275 558 Pfam PF02690 Na+/Pi-cotransporter 13 148 9.7E-35 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 RMET_RS01585 d786538709be76b385678addb635b275 558 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 306 4.8E-85 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 RMET_RS01585 d786538709be76b385678addb635b275 558 SUPERFAMILY SSF109755 320 532 5.44E-34 T 22-04-2016 RMET_RS00370 683804dc4a3262a35f47515eca068ee1 279 PANTHER PTHR24220 16 255 1.2E-110 T 22-04-2016 RMET_RS00370 683804dc4a3262a35f47515eca068ee1 279 Gene3D G3DSA:3.40.50.300 13 241 1.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00370 683804dc4a3262a35f47515eca068ee1 279 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS00370 683804dc4a3262a35f47515eca068ee1 279 PANTHER PTHR24220:SF483 16 255 1.2E-110 T 22-04-2016 RMET_RS00370 683804dc4a3262a35f47515eca068ee1 279 Pfam PF00005 ABC transporter 31 180 2.8E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS00370 683804dc4a3262a35f47515eca068ee1 279 SUPERFAMILY SSF52540 14 247 1.43E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS00370 683804dc4a3262a35f47515eca068ee1 279 SMART SM00382 39 228 2.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS17180 d87739685c2b12b58e6f16a5325c23f4 220 Gene3D G3DSA:1.10.760.10 105 211 2.3E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17180 d87739685c2b12b58e6f16a5325c23f4 220 PIRSF PIRSF024608 4 220 2.5E-78 T 22-04-2016 IPR016823 Sulfur oxidation c-type cytochrome SoxX, type II RMET_RS17180 d87739685c2b12b58e6f16a5325c23f4 220 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 134 213 1.1E-27 T 22-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX RMET_RS17180 d87739685c2b12b58e6f16a5325c23f4 220 SUPERFAMILY SSF46626 105 211 3.15E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS17180 d87739685c2b12b58e6f16a5325c23f4 220 SUPERFAMILY SSF46626 3 21 3.15E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS08400 a19e5925eb510e937688a0bb05a8fc5d 146 Pfam PF00582 Universal stress protein family 2 141 8.8E-29 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS08400 a19e5925eb510e937688a0bb05a8fc5d 146 SUPERFAMILY SSF52402 2 143 4.26E-34 T 22-04-2016 RMET_RS08400 a19e5925eb510e937688a0bb05a8fc5d 146 PRINTS PR01438 Universal stress protein signature 2 20 1.7E-21 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08400 a19e5925eb510e937688a0bb05a8fc5d 146 PRINTS PR01438 Universal stress protein signature 101 113 1.7E-21 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08400 a19e5925eb510e937688a0bb05a8fc5d 146 PRINTS PR01438 Universal stress protein signature 119 141 1.7E-21 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS08400 a19e5925eb510e937688a0bb05a8fc5d 146 Gene3D G3DSA:3.40.50.620 2 142 1.2E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS08400 a19e5925eb510e937688a0bb05a8fc5d 146 PANTHER PTHR31964 2 141 5.1E-29 T 22-04-2016 RMET_RS08400 a19e5925eb510e937688a0bb05a8fc5d 146 PANTHER PTHR31964:SF26 2 141 5.1E-29 T 22-04-2016 RMET_RS05435 9b8a21ebbd2a4c76f80de075ae0c761f 263 Gene3D G3DSA:3.60.21.10 195 244 4.0E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS05435 9b8a21ebbd2a4c76f80de075ae0c761f 263 Gene3D G3DSA:3.60.21.10 20 142 4.0E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS05435 9b8a21ebbd2a4c76f80de075ae0c761f 263 PANTHER PTHR34990 4 238 7.5E-75 T 22-04-2016 RMET_RS05435 9b8a21ebbd2a4c76f80de075ae0c761f 263 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 20 241 5.0E-72 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RMET_RS05435 9b8a21ebbd2a4c76f80de075ae0c761f 263 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 263 101.699 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RMET_RS05435 9b8a21ebbd2a4c76f80de075ae0c761f 263 PANTHER PTHR34990:SF1 4 238 7.5E-75 T 22-04-2016 RMET_RS05435 9b8a21ebbd2a4c76f80de075ae0c761f 263 SUPERFAMILY SSF56300 21 260 2.53E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RMET_RS05435 9b8a21ebbd2a4c76f80de075ae0c761f 263 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 21 233 4.3E-8 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type RMET_RS27555 0a2733b445b830cc46f855b96ae555f4 329 PANTHER PTHR30469 98 329 1.4E-40 T 22-04-2016 RMET_RS27555 0a2733b445b830cc46f855b96ae555f4 329 SUPERFAMILY SSF111369 159 325 1.1E-17 T 22-04-2016 RMET_RS27555 0a2733b445b830cc46f855b96ae555f4 329 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 171 327 5.7E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS27555 0a2733b445b830cc46f855b96ae555f4 329 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 157 326 7.3E-37 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS27555 0a2733b445b830cc46f855b96ae555f4 329 Gene3D G3DSA:2.40.50.100 278 309 7.3E-16 T 22-04-2016 RMET_RS27555 0a2733b445b830cc46f855b96ae555f4 329 Gene3D G3DSA:2.40.50.100 175 203 7.3E-16 T 22-04-2016 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 PANTHER PTHR11606 49 237 1.7E-91 T 22-04-2016 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 SUPERFAMILY SSF51735 199 237 8.67E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 SUPERFAMILY SSF53223 16 202 3.2E-68 T 22-04-2016 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 200 237 5.1E-6 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 Gene3D G3DSA:3.40.192.10 58 195 8.3E-58 T 22-04-2016 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 191 213 2.6E-19 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 2.6E-19 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 233 237 2.6E-19 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 Gene3D G3DSA:3.40.50.720 196 237 8.5E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS20105 7b3a6a64de76bf1a1b4f4ba941513b24 237 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 4.4E-54 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 RMET_RS06370 40917306c288ed20a04a82dd452e4003 343 SUPERFAMILY SSF53098 118 291 8.35E-17 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS06370 40917306c288ed20a04a82dd452e4003 343 SUPERFAMILY SSF46689 5 74 8.87E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS06370 40917306c288ed20a04a82dd452e4003 343 PANTHER PTHR35004 1 291 4.4E-120 T 22-04-2016 RMET_RS06370 40917306c288ed20a04a82dd452e4003 343 Gene3D G3DSA:1.10.10.60 2 39 1.1E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS06370 40917306c288ed20a04a82dd452e4003 343 Pfam PF13384 Homeodomain-like domain 13 43 6.7E-6 T 22-04-2016 RMET_RS06370 40917306c288ed20a04a82dd452e4003 343 Pfam PF00665 Integrase core domain 117 242 2.2E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS06370 40917306c288ed20a04a82dd452e4003 343 PANTHER PTHR35004:SF1 1 291 4.4E-120 T 22-04-2016 RMET_RS06370 40917306c288ed20a04a82dd452e4003 343 Gene3D G3DSA:3.30.420.10 117 287 1.4E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS16685 2354356cbcb10608634c74033c475958 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16685 2354356cbcb10608634c74033c475958 125 Gene3D G3DSA:2.40.50.140 1 123 4.1E-66 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS16685 2354356cbcb10608634c74033c475958 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 6.6E-71 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RMET_RS16685 2354356cbcb10608634c74033c475958 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RMET_RS16685 2354356cbcb10608634c74033c475958 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RMET_RS16685 2354356cbcb10608634c74033c475958 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RMET_RS16685 2354356cbcb10608634c74033c475958 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RMET_RS16685 2354356cbcb10608634c74033c475958 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RMET_RS16685 2354356cbcb10608634c74033c475958 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RMET_RS16685 2354356cbcb10608634c74033c475958 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.673 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RMET_RS16685 2354356cbcb10608634c74033c475958 125 SUPERFAMILY SSF50249 2 123 2.31E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS16685 2354356cbcb10608634c74033c475958 125 Pfam PF00164 Ribosomal protein S12/S23 5 123 1.0E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16685 2354356cbcb10608634c74033c475958 125 PANTHER PTHR11652 1 116 2.6E-75 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16685 2354356cbcb10608634c74033c475958 125 PIRSF PIRSF002133 1 124 1.1E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 PANTHER PTHR33569 2 100 1.1E-45 T 22-04-2016 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 5.5E-53 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 PANTHER PTHR33569:SF1 2 100 1.1E-45 T 22-04-2016 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.562 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 Pfam PF00547 Urease, gamma subunit 1 99 2.2E-48 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 SUPERFAMILY SSF54111 1 99 6.15E-47 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 PIRSF PIRSF001223 1 100 5.1E-52 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 Gene3D G3DSA:3.30.280.10 1 99 1.7E-50 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS04820 194c715392924c82c2cc6476e1825485 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-36 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RMET_RS31460 0618137d8bd61ded76d819ef185c320e 196 Gene3D G3DSA:3.40.50.300 82 196 2.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS31460 0618137d8bd61ded76d819ef185c320e 196 PANTHER PTHR21343:SF13 61 196 1.7E-31 T 22-04-2016 RMET_RS31460 0618137d8bd61ded76d819ef185c320e 196 Pfam PF13500 AAA domain 84 195 2.1E-17 T 22-04-2016 RMET_RS31460 0618137d8bd61ded76d819ef185c320e 196 SUPERFAMILY SSF52540 83 196 3.37E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS31460 0618137d8bd61ded76d819ef185c320e 196 PANTHER PTHR21343 61 196 1.7E-31 T 22-04-2016 RMET_RS10340 6412d800115286775d41e7c351e226e2 291 Pfam PF01522 Polysaccharide deacetylase 35 183 3.5E-20 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RMET_RS10340 6412d800115286775d41e7c351e226e2 291 Gene3D G3DSA:3.20.20.370 32 259 1.8E-41 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RMET_RS10340 6412d800115286775d41e7c351e226e2 291 SUPERFAMILY SSF88713 32 262 8.9E-40 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RMET_RS12620 13c49661b58be8f96cc1a887970e862e 176 Pfam PF02417 Chromate transporter 10 171 1.5E-26 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RMET_RS12620 13c49661b58be8f96cc1a887970e862e 176 PANTHER PTHR33567 6 173 2.7E-22 T 22-04-2016 RMET_RS13990 a17524f2505692b976d7eee2949c820b 269 PANTHER PTHR24220 15 240 2.0E-63 T 22-04-2016 RMET_RS13990 a17524f2505692b976d7eee2949c820b 269 SMART SM00382 38 235 2.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS13990 a17524f2505692b976d7eee2949c820b 269 SUPERFAMILY SSF52540 12 240 5.33E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13990 a17524f2505692b976d7eee2949c820b 269 PANTHER PTHR24220:SF73 15 240 2.0E-63 T 22-04-2016 RMET_RS13990 a17524f2505692b976d7eee2949c820b 269 Gene3D G3DSA:3.40.50.300 15 239 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13990 a17524f2505692b976d7eee2949c820b 269 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS13990 a17524f2505692b976d7eee2949c820b 269 Pfam PF00005 ABC transporter 29 178 5.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS27185 716d3e90bd4469714caf1c5d7388b183 91 Pfam PF04279 Intracellular septation protein A 2 91 3.9E-34 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RMET_RS27185 716d3e90bd4469714caf1c5d7388b183 91 PANTHER PTHR36917:SF1 2 91 1.5E-23 T 22-04-2016 RMET_RS27185 716d3e90bd4469714caf1c5d7388b183 91 PANTHER PTHR36917 2 91 1.5E-23 T 22-04-2016 RMET_RS03645 fa175674dece74630916faeb350421eb 409 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 407 32.967 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 RMET_RS03645 fa175674dece74630916faeb350421eb 409 SUPERFAMILY SSF48452 40 93 2.69E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS03645 fa175674dece74630916faeb350421eb 409 SUPERFAMILY SSF48452 155 237 2.69E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS03645 fa175674dece74630916faeb350421eb 409 PANTHER PTHR23083 40 272 2.3E-14 T 22-04-2016 RMET_RS03645 fa175674dece74630916faeb350421eb 409 SMART SM00028 36 69 65.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS03645 fa175674dece74630916faeb350421eb 409 SMART SM00028 180 213 2.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS03645 fa175674dece74630916faeb350421eb 409 SMART SM00028 141 174 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RMET_RS03645 fa175674dece74630916faeb350421eb 409 Pfam PF13432 Tetratricopeptide repeat 43 90 1.8E-4 T 22-04-2016 RMET_RS03645 fa175674dece74630916faeb350421eb 409 Pfam PF13432 Tetratricopeptide repeat 185 243 5.5E-5 T 22-04-2016 RMET_RS03645 fa175674dece74630916faeb350421eb 409 Gene3D G3DSA:1.25.40.10 42 278 1.2E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS09725 35487d878558674b5e4f445e808a27b8 253 PANTHER PTHR30269:SF14 9 252 3.7E-30 T 22-04-2016 RMET_RS09725 35487d878558674b5e4f445e808a27b8 253 PANTHER PTHR30269 9 252 3.7E-30 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RMET_RS09725 35487d878558674b5e4f445e808a27b8 253 Pfam PF01925 Sulfite exporter TauE/SafE 21 244 2.1E-28 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 5 275 1.0E-118 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 Gene3D G3DSA:3.90.800.10 70 181 1.5E-19 T 22-04-2016 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 5 293 43.189 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PANTHER PTHR11451:SF35 1 232 1.2E-88 T 22-04-2016 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PANTHER PTHR11451:SF35 251 262 1.2E-88 T 22-04-2016 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 8.8E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 205 8.8E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 8.8E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 8.8E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 191 8.8E-15 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 SUPERFAMILY SSF52374 5 273 1.05E-85 T 22-04-2016 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PANTHER PTHR11451 1 232 1.2E-88 T 22-04-2016 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 PANTHER PTHR11451 251 262 1.2E-88 T 22-04-2016 RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 Gene3D G3DSA:3.40.50.620 183 232 5.8E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 Gene3D G3DSA:3.40.50.620 5 69 5.8E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS12970 abe1300d62ce876469080f60780fb15a 310 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 249 4.9E-43 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RMET_RS31870 4b96f12c0112a4e049618f4bf407daf6 190 SUPERFAMILY SSF52540 100 190 1.06E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS31870 4b96f12c0112a4e049618f4bf407daf6 190 Gene3D G3DSA:3.40.50.300 92 172 3.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03320 23239836b548ec01df8d70799b4e8cb1 148 Pfam PF04138 GtrA-like protein 35 147 3.9E-16 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RMET_RS04400 c17f0164c21f14ba9a03440260560588 137 SUPERFAMILY SSF52172 3 118 1.08E-9 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS04400 c17f0164c21f14ba9a03440260560588 137 Gene3D G3DSA:3.40.50.2300 4 118 2.4E-6 T 22-04-2016 RMET_RS05360 29c7ea387258e965f614878cf00667ee 221 PANTHER PTHR22939 35 202 1.2E-34 T 22-04-2016 RMET_RS05360 29c7ea387258e965f614878cf00667ee 221 PANTHER PTHR22939:SF104 35 202 1.2E-34 T 22-04-2016 RMET_RS05360 29c7ea387258e965f614878cf00667ee 221 Pfam PF02163 Peptidase family M50 123 187 1.1E-6 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 RMET_RS09710 e1157135a324adc4d4d058d562aef5df 396 Gene3D G3DSA:3.90.1300.10 21 393 3.3E-88 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09710 e1157135a324adc4d4d058d562aef5df 396 SUPERFAMILY SSF75304 18 393 1.83E-87 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09710 e1157135a324adc4d4d058d562aef5df 396 Pfam PF01425 Amidase 280 384 5.2E-5 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09710 e1157135a324adc4d4d058d562aef5df 396 Pfam PF01425 Amidase 20 199 1.1E-51 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09710 e1157135a324adc4d4d058d562aef5df 396 ProSitePatterns PS00571 Amidases signature. 110 141 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS09710 e1157135a324adc4d4d058d562aef5df 396 PANTHER PTHR11895 20 395 1.8E-88 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RMET_RS16210 f8ddec302e73e1aa8e1f070f2a219244 248 Gene3D G3DSA:3.40.1390.30 108 215 7.7E-29 T 22-04-2016 RMET_RS16210 f8ddec302e73e1aa8e1f070f2a219244 248 Gene3D G3DSA:3.40.1390.30 1 107 8.1E-36 T 22-04-2016 RMET_RS16210 f8ddec302e73e1aa8e1f070f2a219244 248 PANTHER PTHR13799 1 244 2.1E-70 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RMET_RS16210 f8ddec302e73e1aa8e1f070f2a219244 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 247 7.0E-60 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RMET_RS16210 f8ddec302e73e1aa8e1f070f2a219244 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 235 1.4E-54 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RMET_RS16210 f8ddec302e73e1aa8e1f070f2a219244 248 SUPERFAMILY SSF102705 1 247 5.1E-80 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RMET_RS00740 ab93997f582483f5e108c67a9b28b478 272 SUPERFAMILY SSF54637 123 269 1.65E-20 T 22-04-2016 IPR029069 HotDog domain RMET_RS00740 ab93997f582483f5e108c67a9b28b478 272 Pfam PF13622 Thioesterase-like superfamily 30 269 7.3E-42 T 22-04-2016 RMET_RS00740 ab93997f582483f5e108c67a9b28b478 272 Gene3D G3DSA:3.10.129.10 51 114 2.4E-7 T 22-04-2016 IPR029069 HotDog domain RMET_RS00740 ab93997f582483f5e108c67a9b28b478 272 SUPERFAMILY SSF54637 6 115 2.91E-12 T 22-04-2016 IPR029069 HotDog domain RMET_RS07830 470f21ade25f50efdbc04d1b43af31d6 461 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 3.8E-51 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RMET_RS07830 470f21ade25f50efdbc04d1b43af31d6 461 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 1 305 1.6E-65 T 22-04-2016 IPR014150 Conjugal transfer, TrbL RMET_RS11205 5ad2a62dd8e99cfe9fa6918f178bd6b9 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 280 1.7E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11205 5ad2a62dd8e99cfe9fa6918f178bd6b9 294 PANTHER PTHR30193:SF6 5 291 7.5E-73 T 22-04-2016 RMET_RS11205 5ad2a62dd8e99cfe9fa6918f178bd6b9 294 Gene3D G3DSA:1.10.3720.10 55 282 8.9E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11205 5ad2a62dd8e99cfe9fa6918f178bd6b9 294 PANTHER PTHR30193 5 291 7.5E-73 T 22-04-2016 RMET_RS11205 5ad2a62dd8e99cfe9fa6918f178bd6b9 294 SUPERFAMILY SSF161098 50 274 7.06E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS13955 445386a7742cedb9c897250088748e47 326 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 321 103.383 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RMET_RS13955 445386a7742cedb9c897250088748e47 326 PANTHER PTHR34308:SF1 1 322 8.5E-96 T 22-04-2016 RMET_RS13955 445386a7742cedb9c897250088748e47 326 PANTHER PTHR34308 1 322 8.5E-96 T 22-04-2016 RMET_RS13955 445386a7742cedb9c897250088748e47 326 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 15 283 6.7E-55 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RMET_RS13955 445386a7742cedb9c897250088748e47 326 Pfam PF03186 CobD/Cbib protein 14 297 5.8E-88 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RMET_RS07325 785dcce0e6be13b54d7d061e4d762406 144 Gene3D G3DSA:2.40.50.140 87 140 6.6E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS07325 785dcce0e6be13b54d7d061e4d762406 144 Pfam PF01957 NfeD-like C-terminal, partner-binding 6 140 5.3E-10 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain RMET_RS08255 c55b5c9b953dbedb070dcf3dec93dcd4 352 PANTHER PTHR34861 2 352 4.6E-53 T 22-04-2016 RMET_RS08255 c55b5c9b953dbedb070dcf3dec93dcd4 352 Pfam PF04199 Putative cyclase 88 277 1.2E-12 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RMET_RS08255 c55b5c9b953dbedb070dcf3dec93dcd4 352 Gene3D G3DSA:3.50.30.50 176 352 1.2E-21 T 22-04-2016 RMET_RS08255 c55b5c9b953dbedb070dcf3dec93dcd4 352 Gene3D G3DSA:3.50.30.50 86 127 1.2E-21 T 22-04-2016 RMET_RS08255 c55b5c9b953dbedb070dcf3dec93dcd4 352 SUPERFAMILY SSF102198 153 351 9.02E-13 T 22-04-2016 RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 SUPERFAMILY SSF53822 82 354 2.36E-76 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 Pfam PF13377 Periplasmic binding protein-like domain 189 351 8.7E-40 T 22-04-2016 RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 SMART SM00354 20 92 1.3E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 SUPERFAMILY SSF47413 19 80 8.19E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 PANTHER PTHR30146 20 354 1.4E-102 T 22-04-2016 RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 Gene3D G3DSA:1.10.260.40 22 81 2.8E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 Gene3D G3DSA:3.40.50.2300 190 352 6.3E-57 T 22-04-2016 RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 Gene3D G3DSA:3.40.50.2300 82 189 1.2E-31 T 22-04-2016 RMET_RS09545 9471d57e3ea6aa88ec82c964d838ef35 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 22 69 1.9E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RMET_RS14195 de592d419cccfaa24f079e57c76ba955 111 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 39 3.3E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS14195 de592d419cccfaa24f079e57c76ba955 111 SUPERFAMILY SSF47413 2 50 5.63E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS14195 de592d419cccfaa24f079e57c76ba955 111 Gene3D G3DSA:1.10.260.40 2 39 2.0E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 SUPERFAMILY SSF53756 59 405 9.0E-13 T 22-04-2016 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 PANTHER PTHR23417 1 114 4.4E-87 T 22-04-2016 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 PANTHER PTHR23417 193 423 4.4E-87 T 22-04-2016 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 PANTHER PTHR23417 133 143 4.4E-87 T 22-04-2016 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 PANTHER PTHR23417:SF2 1 114 4.4E-87 T 22-04-2016 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 PANTHER PTHR23417:SF2 193 423 4.4E-87 T 22-04-2016 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 PANTHER PTHR23417:SF2 133 143 4.4E-87 T 22-04-2016 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 Gene3D G3DSA:3.40.50.2000 305 401 2.0E-4 T 22-04-2016 RMET_RS13630 effa1dbb20002ace926883f4cc430283 424 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 1.4E-63 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 RMET_RS03775 c2ef9879839cd9c46990dcd976aeae55 226 PANTHER PTHR12992 6 220 4.4E-48 T 22-04-2016 RMET_RS03775 c2ef9879839cd9c46990dcd976aeae55 226 Pfam PF00293 NUDIX domain 60 147 6.2E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS03775 c2ef9879839cd9c46990dcd976aeae55 226 SUPERFAMILY SSF55811 57 217 4.47E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS03775 c2ef9879839cd9c46990dcd976aeae55 226 Gene3D G3DSA:3.90.79.10 47 224 7.2E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS18145 13316d333945f1f0dee50570bdbb7ad5 256 Gene3D G3DSA:1.10.150.290 135 144 2.8E-26 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RMET_RS18145 13316d333945f1f0dee50570bdbb7ad5 256 Gene3D G3DSA:1.10.150.290 181 237 2.8E-26 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RMET_RS18145 13316d333945f1f0dee50570bdbb7ad5 256 Pfam PF13847 Methyltransferase domain 33 145 3.2E-15 T 22-04-2016 IPR025714 Methyltransferase domain RMET_RS18145 13316d333945f1f0dee50570bdbb7ad5 256 Gene3D G3DSA:3.40.50.150 3 134 6.6E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS18145 13316d333945f1f0dee50570bdbb7ad5 256 PANTHER PTHR10108:SF890 3 235 3.4E-60 T 22-04-2016 RMET_RS18145 13316d333945f1f0dee50570bdbb7ad5 256 SUPERFAMILY SSF53335 16 246 5.31E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS18145 13316d333945f1f0dee50570bdbb7ad5 256 PANTHER PTHR10108 3 235 3.4E-60 T 22-04-2016 RMET_RS06925 51e8bbdbcb47715181ebfe342dcbb573 275 Pfam PF00563 EAL domain 38 252 2.5E-14 T 22-04-2016 IPR001633 EAL domain RMET_RS06925 51e8bbdbcb47715181ebfe342dcbb573 275 Gene3D G3DSA:3.20.20.450 41 259 8.5E-10 T 22-04-2016 IPR001633 EAL domain RMET_RS06925 51e8bbdbcb47715181ebfe342dcbb573 275 SUPERFAMILY SSF141868 38 257 2.35E-18 T 22-04-2016 IPR001633 EAL domain RMET_RS07015 d260999e6d0b17f3d2b21a8dc650f633 156 Gene3D G3DSA:3.30.530.20 2 155 2.8E-63 T 22-04-2016 IPR023393 START-like domain RMET_RS07015 d260999e6d0b17f3d2b21a8dc650f633 156 Pfam PF08982 Domain of unknown function (DUF1857) 8 153 5.7E-33 T 22-04-2016 IPR015075 Protein of unknown function DUF1857 RMET_RS07015 d260999e6d0b17f3d2b21a8dc650f633 156 SUPERFAMILY SSF55961 2 151 1.24E-48 T 22-04-2016 RMET_RS04245 01c25c2f4bbc6b0068c7bd625ea70c01 296 Pfam PF13365 Trypsin-like peptidase domain 29 201 5.5E-8 T 22-04-2016 RMET_RS04245 01c25c2f4bbc6b0068c7bd625ea70c01 296 Gene3D G3DSA:2.40.10.10 3 60 2.4E-5 T 22-04-2016 RMET_RS04245 01c25c2f4bbc6b0068c7bd625ea70c01 296 SUPERFAMILY SSF50494 4 242 9.38E-14 T 22-04-2016 IPR009003 Peptidase S1, PA clan RMET_RS04245 01c25c2f4bbc6b0068c7bd625ea70c01 296 Gene3D G3DSA:2.40.10.10 138 203 4.0E-6 T 22-04-2016 RMET_RS17510 ed8a56b01f76e2ed90f2098da1c88ea8 248 Gene3D G3DSA:3.60.15.10 4 227 3.0E-62 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS17510 ed8a56b01f76e2ed90f2098da1c88ea8 248 SUPERFAMILY SSF56281 5 221 7.56E-53 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS17510 ed8a56b01f76e2ed90f2098da1c88ea8 248 SMART SM00849 13 180 8.4E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS17510 ed8a56b01f76e2ed90f2098da1c88ea8 248 PANTHER PTHR11935:SF113 4 231 1.2E-71 T 22-04-2016 RMET_RS17510 ed8a56b01f76e2ed90f2098da1c88ea8 248 PANTHER PTHR11935 4 231 1.2E-71 T 22-04-2016 RMET_RS17510 ed8a56b01f76e2ed90f2098da1c88ea8 248 Pfam PF00753 Metallo-beta-lactamase superfamily 15 180 3.8E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 Pfam PF01743 Poly A polymerase head domain 59 208 2.8E-32 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 Gene3D G3DSA:3.30.460.10 41 207 1.7E-48 T 22-04-2016 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 Pfam PF12626 Polymerase A arginine-rich C-terminus 348 495 7.0E-43 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 SUPERFAMILY SSF81891 206 441 6.28E-55 T 22-04-2016 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 12 499 36.539 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 Gene3D G3DSA:1.10.3090.10 208 438 8.1E-49 T 22-04-2016 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 29 453 1.9E-149 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 PANTHER PTHR13734:SF47 16 295 9.0E-103 T 22-04-2016 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 PANTHER PTHR13734 16 295 9.0E-103 T 22-04-2016 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 SUPERFAMILY SSF81301 34 126 3.05E-36 T 22-04-2016 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 SUPERFAMILY SSF81301 153 205 3.05E-36 T 22-04-2016 RMET_RS14605 6202eac14de21acfcb1e41dcef7c4db6 529 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 235 297 3.3E-20 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 80 94 3.1E-40 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 66 80 3.1E-40 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 24 35 3.1E-40 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 35 51 3.1E-40 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 6 24 3.1E-40 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 51 66 3.1E-40 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 ProSitePatterns PS01047 Heavy-metal-associated domain. 32 61 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 5 95 2.8E-45 T 22-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 SUPERFAMILY SSF55008 21 93 3.4E-21 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 Gene3D G3DSA:3.30.70.100 25 92 1.6E-22 T 22-04-2016 RMET_RS11615 cb5205d98947b298ee31e9331525692a 95 Pfam PF00403 Heavy-metal-associated domain 29 89 2.1E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS04195 7dc521447a0b6a9f80f1977db99478c7 736 PANTHER PTHR32552 52 736 1.7E-89 T 22-04-2016 RMET_RS04195 7dc521447a0b6a9f80f1977db99478c7 736 PANTHER PTHR32552:SF8 52 736 1.7E-89 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RMET_RS04195 7dc521447a0b6a9f80f1977db99478c7 736 Pfam PF00593 TonB dependent receptor 483 734 4.1E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS04195 7dc521447a0b6a9f80f1977db99478c7 736 Gene3D G3DSA:2.170.130.10 25 166 3.3E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS04195 7dc521447a0b6a9f80f1977db99478c7 736 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 157 3.9E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS04195 7dc521447a0b6a9f80f1977db99478c7 736 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 736 4.2E-73 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RMET_RS04195 7dc521447a0b6a9f80f1977db99478c7 736 SUPERFAMILY SSF56935 24 736 1.39E-107 T 22-04-2016 RMET_RS04195 7dc521447a0b6a9f80f1977db99478c7 736 Gene3D G3DSA:2.40.170.20 172 736 7.1E-115 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS06105 18b83940ff70197c710409a82530b3e3 298 PANTHER PTHR32196:SF27 1 295 2.2E-132 T 22-04-2016 RMET_RS06105 18b83940ff70197c710409a82530b3e3 298 PANTHER PTHR32196 1 295 2.2E-132 T 22-04-2016 RMET_RS06105 18b83940ff70197c710409a82530b3e3 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 276 3.9E-32 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS16875 70d9cf1915ec2859e2bb77eeb992ac1d 367 SUPERFAMILY SSF55874 300 361 1.58E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS16875 70d9cf1915ec2859e2bb77eeb992ac1d 367 SUPERFAMILY SSF55874 204 260 1.58E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS16875 70d9cf1915ec2859e2bb77eeb992ac1d 367 Gene3D G3DSA:3.30.565.10 204 325 6.0E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RMET_RS15440 d5b0c1ba74ae3497a96ef2d674455167 312 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 298 38.463 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 RMET_RS15440 d5b0c1ba74ae3497a96ef2d674455167 312 PANTHER PTHR38103 2 301 5.9E-87 T 22-04-2016 RMET_RS15440 d5b0c1ba74ae3497a96ef2d674455167 312 Pfam PF04381 Putative exonuclease, RdgC 1 296 5.9E-120 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 RMET_RS15440 d5b0c1ba74ae3497a96ef2d674455167 312 PANTHER PTHR38103:SF1 2 301 5.9E-87 T 22-04-2016 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 369 2.5E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 24 112 3.9E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 Gene3D G3DSA:2.40.110.10 116 210 1.9E-14 T 22-04-2016 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 PANTHER PTHR10909 1 394 1.0E-59 T 22-04-2016 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 Gene3D G3DSA:1.10.540.10 1 112 6.9E-12 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 SUPERFAMILY SSF56645 1 219 2.36E-40 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 Gene3D G3DSA:1.20.140.10 211 374 6.0E-30 T 22-04-2016 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 116 208 2.3E-11 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 PANTHER PTHR10909:SF341 1 394 1.0E-59 T 22-04-2016 RMET_RS04230 5576bc4fd40fe969e2f7333071be480a 402 SUPERFAMILY SSF47203 231 374 3.22E-30 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 Pfam PF01145 SPFH domain / Band 7 family 25 193 7.7E-35 T 22-04-2016 IPR001107 Band 7 domain RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 SUPERFAMILY SSF117892 51 184 6.8E-43 T 22-04-2016 IPR001107 Band 7 domain RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PANTHER PTHR10264:SF60 10 242 5.0E-111 T 22-04-2016 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 SMART SM00244 20 177 6.2E-62 T 22-04-2016 IPR001107 Band 7 domain RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PANTHER PTHR10264 10 242 5.0E-111 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PRINTS PR00721 Stomatin signature 74 95 5.1E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PRINTS PR00721 Stomatin signature 172 193 5.1E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PRINTS PR00721 Stomatin signature 153 171 5.1E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PRINTS PR00721 Stomatin signature 197 220 5.1E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PRINTS PR00721 Stomatin signature 27 49 5.1E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PRINTS PR00721 Stomatin signature 109 126 5.1E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS04030 75e1696d9118b9c5898ac6c15f8b9729 251 PRINTS PR00721 Stomatin signature 129 152 5.1E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RMET_RS13785 55aa3c742e4efd77bfdf287c10c527a9 396 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 391 5.1E-121 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 RMET_RS13785 55aa3c742e4efd77bfdf287c10c527a9 396 Gene3D G3DSA:1.25.40.10 147 390 1.4E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS13785 55aa3c742e4efd77bfdf287c10c527a9 396 Pfam PF07219 HemY protein N-terminus 27 131 2.9E-24 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 RMET_RS13785 55aa3c742e4efd77bfdf287c10c527a9 396 SUPERFAMILY SSF48452 298 390 2.37E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS16500 e9791e6c8afb246dc919d8a2d8626618 131 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16500 e9791e6c8afb246dc919d8a2d8626618 131 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.498 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16500 e9791e6c8afb246dc919d8a2d8626618 131 Pfam PF01196 Ribosomal protein L17 20 116 2.2E-37 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16500 e9791e6c8afb246dc919d8a2d8626618 131 Gene3D G3DSA:3.90.1030.10 1 117 2.6E-52 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16500 e9791e6c8afb246dc919d8a2d8626618 131 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.4E-48 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16500 e9791e6c8afb246dc919d8a2d8626618 131 PANTHER PTHR14413 1 119 2.2E-66 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16500 e9791e6c8afb246dc919d8a2d8626618 131 SUPERFAMILY SSF64263 1 119 1.57E-52 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS12435 97e88cb327cdf12bfe992890e3a6a98b 424 Pfam PF02653 Branched-chain amino acid transport system / permease component 119 405 1.4E-52 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS12435 97e88cb327cdf12bfe992890e3a6a98b 424 PANTHER PTHR30482 70 422 4.1E-168 T 22-04-2016 RMET_RS12435 97e88cb327cdf12bfe992890e3a6a98b 424 PANTHER PTHR30482:SF9 70 422 4.1E-168 T 22-04-2016 RMET_RS12435 97e88cb327cdf12bfe992890e3a6a98b 424 Pfam PF11862 Domain of unknown function (DUF3382) 20 110 1.5E-24 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RMET_RS01670 d5859f39045315581c7090c7c6a18860 140 PANTHER PTHR30041:SF0 1 135 1.3E-49 T 22-04-2016 RMET_RS01670 d5859f39045315581c7090c7c6a18860 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 2.2E-45 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 RMET_RS01670 d5859f39045315581c7090c7c6a18860 140 SUPERFAMILY SSF52833 2 136 3.28E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01670 d5859f39045315581c7090c7c6a18860 140 Pfam PF03960 ArsC family 6 113 5.1E-17 T 22-04-2016 IPR006660 Arsenate reductase-like RMET_RS01670 d5859f39045315581c7090c7c6a18860 140 Gene3D G3DSA:3.40.30.10 1 139 1.2E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS01670 d5859f39045315581c7090c7c6a18860 140 PANTHER PTHR30041 1 135 1.3E-49 T 22-04-2016 RMET_RS15395 99d04d573ddcec5b662f90360bc8f1a4 153 PANTHER PTHR36919:SF1 7 151 1.8E-44 T 22-04-2016 RMET_RS15395 99d04d573ddcec5b662f90360bc8f1a4 153 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 33 151 1.1E-32 T 22-04-2016 IPR019223 Domain of unknown function DUF2147 RMET_RS15395 99d04d573ddcec5b662f90360bc8f1a4 153 PANTHER PTHR36919 7 151 1.8E-44 T 22-04-2016 RMET_RS12585 fdf8b9244c1e3b3f6e234cb2dc54fd9f 209 Pfam PF01810 LysE type translocator 22 204 1.6E-13 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS12585 fdf8b9244c1e3b3f6e234cb2dc54fd9f 209 PANTHER PTHR30086:SF12 8 204 2.6E-42 T 22-04-2016 RMET_RS12585 fdf8b9244c1e3b3f6e234cb2dc54fd9f 209 PANTHER PTHR30086 8 204 2.6E-42 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RMET_RS05495 47af40a93708deae1a7b7e19160452a0 501 PIRSF PIRSF002457 13 501 2.7E-130 T 22-04-2016 IPR030676 Citrate carrier CitT-related RMET_RS05495 47af40a93708deae1a7b7e19160452a0 501 PANTHER PTHR10283 9 501 4.0E-148 T 22-04-2016 RMET_RS05495 47af40a93708deae1a7b7e19160452a0 501 PANTHER PTHR10283:SF13 9 501 4.0E-148 T 22-04-2016 IPR030676 Citrate carrier CitT-related RMET_RS05495 47af40a93708deae1a7b7e19160452a0 501 Pfam PF00939 Sodium:sulfate symporter transmembrane region 22 501 1.5E-129 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS05495 47af40a93708deae1a7b7e19160452a0 501 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 37 495 1.7E-110 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS08465 9374a392e12034287cc410ed8910fb4a 343 PANTHER PTHR33121:SF13 1 256 6.4E-42 T 22-04-2016 RMET_RS08465 9374a392e12034287cc410ed8910fb4a 343 Pfam PF00563 EAL domain 1 220 8.4E-42 T 22-04-2016 IPR001633 EAL domain RMET_RS08465 9374a392e12034287cc410ed8910fb4a 343 Gene3D G3DSA:3.20.20.450 1 233 3.4E-53 T 22-04-2016 IPR001633 EAL domain RMET_RS08465 9374a392e12034287cc410ed8910fb4a 343 SMART SM00052 1 225 2.4E-27 T 22-04-2016 IPR001633 EAL domain RMET_RS08465 9374a392e12034287cc410ed8910fb4a 343 PANTHER PTHR33121 1 256 6.4E-42 T 22-04-2016 RMET_RS08465 9374a392e12034287cc410ed8910fb4a 343 SUPERFAMILY SSF141868 2 234 4.18E-52 T 22-04-2016 IPR001633 EAL domain RMET_RS24030 773027f9e88e3aa32bdb31d5ff078f59 94 PANTHER PTHR11804:SF8 1 94 2.2E-48 T 22-04-2016 RMET_RS24030 773027f9e88e3aa32bdb31d5ff078f59 94 Pfam PF01432 Peptidase family M3 1 94 2.0E-34 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RMET_RS24030 773027f9e88e3aa32bdb31d5ff078f59 94 Gene3D G3DSA:3.40.390.10 1 94 5.3E-37 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RMET_RS24030 773027f9e88e3aa32bdb31d5ff078f59 94 SUPERFAMILY SSF55486 1 94 3.71E-33 T 22-04-2016 RMET_RS24030 773027f9e88e3aa32bdb31d5ff078f59 94 PANTHER PTHR11804 1 94 2.2E-48 T 22-04-2016 RMET_RS09475 aecf1d27f42663a18c9ba2449c150eb4 300 SUPERFAMILY SSF103481 52 151 3.92E-8 T 22-04-2016 RMET_RS09475 aecf1d27f42663a18c9ba2449c150eb4 300 Pfam PF00892 EamA-like transporter family 158 287 1.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS09475 aecf1d27f42663a18c9ba2449c150eb4 300 Pfam PF00892 EamA-like transporter family 22 148 2.5E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS09475 aecf1d27f42663a18c9ba2449c150eb4 300 SUPERFAMILY SSF103481 197 290 3.79E-8 T 22-04-2016 RMET_RS09475 aecf1d27f42663a18c9ba2449c150eb4 300 PANTHER PTHR32322:SF9 6 286 7.8E-29 T 22-04-2016 RMET_RS09475 aecf1d27f42663a18c9ba2449c150eb4 300 PANTHER PTHR32322 6 286 7.8E-29 T 22-04-2016 RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 PANTHER PTHR21366:SF10 197 309 6.5E-15 T 22-04-2016 RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 PANTHER PTHR21366:SF10 19 74 6.5E-15 T 22-04-2016 RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 PANTHER PTHR21366 197 309 6.5E-15 T 22-04-2016 RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 PANTHER PTHR21366 19 74 6.5E-15 T 22-04-2016 RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 Gene3D G3DSA:3.10.180.10 1 149 4.0E-39 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 114 1.0E-4 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 162 271 1.0E-17 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 SUPERFAMILY SSF54593 1 311 4.78E-48 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 Gene3D G3DSA:3.10.180.10 150 291 4.6E-46 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 TIGRFAM TIGR03211 catechol_2_3: catechol 2,3 dioxygenase 2 314 8.0E-137 T 22-04-2016 IPR017624 Catechol 2,3 dioxygenase GO:0008198|GO:0018577|GO:0019439|GO:0055114 KEGG: 00361+1.13.11.2|KEGG: 00362+1.13.11.2|KEGG: 00622+1.13.11.2|KEGG: 00643+1.13.11.2|MetaCyc: PWY-5419|MetaCyc: PWY-5641 RMET_RS06680 5a80120c269889311aa6b6c3a4e7f948 314 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 250 271 - T 22-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 RMET_RS13010 398bba96ca59bdeeb0d16ae967c34353 410 SUPERFAMILY SSF142764 4 407 4.97E-81 T 22-04-2016 RMET_RS13010 398bba96ca59bdeeb0d16ae967c34353 410 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 245 400 1.6E-20 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain RMET_RS13010 398bba96ca59bdeeb0d16ae967c34353 410 Pfam PF07005 Putative sugar-binding N-terminal domain 4 222 3.6E-46 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain RMET_RS04810 b440e3c909d43b4d59f636fbdfe58fde 230 Gene3D G3DSA:3.40.50.300 1 220 3.0E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04810 b440e3c909d43b4d59f636fbdfe58fde 230 PANTHER PTHR24220 3 230 6.4E-126 T 22-04-2016 RMET_RS04810 b440e3c909d43b4d59f636fbdfe58fde 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 1.1E-103 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE RMET_RS04810 b440e3c909d43b4d59f636fbdfe58fde 230 SMART SM00382 26 209 8.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS04810 b440e3c909d43b4d59f636fbdfe58fde 230 PANTHER PTHR24220:SF404 3 230 6.4E-126 T 22-04-2016 RMET_RS04810 b440e3c909d43b4d59f636fbdfe58fde 230 SUPERFAMILY SSF52540 2 218 1.54E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS04810 b440e3c909d43b4d59f636fbdfe58fde 230 Pfam PF00005 ABC transporter 17 159 9.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS01555 c8c301ecf83095749fd509b2744282a2 208 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 14 197 7.5E-52 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 RMET_RS01555 c8c301ecf83095749fd509b2744282a2 208 Gene3D G3DSA:2.60.450.10 105 192 1.9E-5 T 22-04-2016 RMET_RS01555 c8c301ecf83095749fd509b2744282a2 208 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 18 197 6.5E-45 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related RMET_RS01555 c8c301ecf83095749fd509b2744282a2 208 PANTHER PTHR37481:SF1 12 203 1.4E-15 T 22-04-2016 RMET_RS01555 c8c301ecf83095749fd509b2744282a2 208 PANTHER PTHR37481 12 203 1.4E-15 T 22-04-2016 RMET_RS11975 46be641e2998a522f05eb920e0a508be 63 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 49 9.1E-8 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 RMET_RS11975 46be641e2998a522f05eb920e0a508be 63 Pfam PF04995 Heme exporter protein D (CcmD) 13 49 5.9E-6 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 RMET_RS15125 c4f0d1d4f8a3822756d41eee7c59d961 658 Pfam PF11843 Protein of unknown function (DUF3363) 284 655 9.8E-143 T 22-04-2016 IPR021795 Protein of unknown function DUF3363 RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 PIRSF PIRSF000103 1 289 5.1E-68 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 Gene3D G3DSA:1.10.1040.10 165 286 2.1E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 SUPERFAMILY SSF48179 163 286 8.96E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 PANTHER PTHR22981 1 288 6.3E-97 T 22-04-2016 RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 SUPERFAMILY SSF51735 3 163 5.09E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 7.4E-49 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 285 4.1E-25 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RMET_RS14155 6aad07e0b2f7669df8e4cd8b77c706eb 289 Gene3D G3DSA:3.40.50.720 2 163 5.8E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS13910 fcecf7711468b18cb252e512175a99b7 641 PANTHER PTHR12815:SF12 319 638 9.6E-64 T 22-04-2016 RMET_RS13910 fcecf7711468b18cb252e512175a99b7 641 PANTHER PTHR12815:SF12 77 288 9.6E-64 T 22-04-2016 RMET_RS13910 fcecf7711468b18cb252e512175a99b7 641 Pfam PF01103 Surface antigen 446 629 7.5E-24 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RMET_RS13910 fcecf7711468b18cb252e512175a99b7 641 Gene3D G3DSA:2.40.160.50 329 451 2.5E-15 T 22-04-2016 RMET_RS13910 fcecf7711468b18cb252e512175a99b7 641 Gene3D G3DSA:2.40.160.50 491 630 2.5E-15 T 22-04-2016 RMET_RS13910 fcecf7711468b18cb252e512175a99b7 641 PANTHER PTHR12815 319 638 9.6E-64 T 22-04-2016 RMET_RS13910 fcecf7711468b18cb252e512175a99b7 641 PANTHER PTHR12815 77 288 9.6E-64 T 22-04-2016 RMET_RS05685 60d5943d66710d50998d6bd65e193af6 197 PANTHER PTHR30546 1 197 4.0E-73 T 22-04-2016 RMET_RS05685 60d5943d66710d50998d6bd65e193af6 197 SUPERFAMILY SSF52218 1 195 2.23E-60 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS05685 60d5943d66710d50998d6bd65e193af6 197 Gene3D G3DSA:3.40.50.360 1 196 8.0E-67 T 22-04-2016 IPR029039 Flavoprotein-like domain RMET_RS05685 60d5943d66710d50998d6bd65e193af6 197 Pfam PF03358 NADPH-dependent FMN reductase 11 140 8.8E-8 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RMET_RS05685 60d5943d66710d50998d6bd65e193af6 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 8.5E-43 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RMET_RS05685 60d5943d66710d50998d6bd65e193af6 197 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RMET_RS15445 76312410cd899162155f5c7c099a6e3a 320 SUPERFAMILY SSF50129 1 135 7.91E-25 T 22-04-2016 IPR011032 GroES-like RMET_RS15445 76312410cd899162155f5c7c099a6e3a 320 Gene3D G3DSA:3.40.50.720 136 261 1.8E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15445 76312410cd899162155f5c7c099a6e3a 320 SMART SM00829 10 317 4.7E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RMET_RS15445 76312410cd899162155f5c7c099a6e3a 320 SUPERFAMILY SSF51735 103 217 3.06E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15445 76312410cd899162155f5c7c099a6e3a 320 Gene3D G3DSA:3.90.180.10 1 135 3.6E-23 T 22-04-2016 IPR011032 GroES-like RMET_RS15445 76312410cd899162155f5c7c099a6e3a 320 PANTHER PTHR11695 13 217 3.0E-34 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RMET_RS10580 6bf49fbbe3480796d85f7094468a2660 284 SUPERFAMILY SSF56219 3 284 2.49E-35 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS10580 6bf49fbbe3480796d85f7094468a2660 284 PANTHER PTHR14859 184 278 1.8E-20 T 22-04-2016 IPR027317 PGAP2-interacting protein RMET_RS10580 6bf49fbbe3480796d85f7094468a2660 284 PANTHER PTHR14859 3 155 1.8E-20 T 22-04-2016 IPR027317 PGAP2-interacting protein RMET_RS10580 6bf49fbbe3480796d85f7094468a2660 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 275 8.7E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS10580 6bf49fbbe3480796d85f7094468a2660 284 Gene3D G3DSA:3.60.10.10 1 282 1.5E-21 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS17200 59e368066fc4712472b0cc2c57d5f696 151 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 151 5.8E-53 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY RMET_RS17200 59e368066fc4712472b0cc2c57d5f696 151 Pfam PF13501 Sulfur oxidation protein SoxY 49 149 1.7E-33 T 22-04-2016 IPR032711 Ig-like SoxY domain RMET_RS17200 59e368066fc4712472b0cc2c57d5f696 151 PIRSF PIRSF010312 1 151 6.7E-50 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY RMET_RS08125 6896c3074646f7e65e5b98899bab8b32 334 Gene3D G3DSA:1.10.3720.10 93 323 1.1E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08125 6896c3074646f7e65e5b98899bab8b32 334 SUPERFAMILY SSF161098 94 311 1.29E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08125 6896c3074646f7e65e5b98899bab8b32 334 PANTHER PTHR30465:SF0 1 327 1.4E-110 T 22-04-2016 RMET_RS08125 6896c3074646f7e65e5b98899bab8b32 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 326 2.1E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08125 6896c3074646f7e65e5b98899bab8b32 334 PANTHER PTHR30465 1 327 1.4E-110 T 22-04-2016 RMET_RS16885 96ea8a2f2fce296634a84ce9206a97ab 239 Pfam PF14452 Multiubiquitin 93 157 5.9E-17 T 22-04-2016 IPR027802 Multi-ubiquitin domain RMET_RS16885 96ea8a2f2fce296634a84ce9206a97ab 239 Pfam PF14452 Multiubiquitin 26 88 4.7E-17 T 22-04-2016 IPR027802 Multi-ubiquitin domain RMET_RS16885 96ea8a2f2fce296634a84ce9206a97ab 239 Pfam PF14452 Multiubiquitin 165 236 2.9E-17 T 22-04-2016 IPR027802 Multi-ubiquitin domain RMET_RS15145 6c1c4b58f65578fcdcbf04bcd12b35ea 87 Gene3D G3DSA:1.10.1220.10 44 80 1.5E-6 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RMET_RS15145 6c1c4b58f65578fcdcbf04bcd12b35ea 87 SUPERFAMILY SSF47598 44 84 6.56E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 Gene3D G3DSA:3.20.20.60 170 323 4.2E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 Gene3D G3DSA:3.20.20.60 5 75 4.2E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 SUPERFAMILY SSF51621 2 78 2.02E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 SUPERFAMILY SSF51621 168 341 2.02E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 SUPERFAMILY SSF52935 321 470 3.4E-36 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 Gene3D G3DSA:2.40.33.10 76 169 1.2E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PANTHER PTHR11817:SF3 3 475 2.7E-201 T 22-04-2016 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 5.6E-115 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 SUPERFAMILY SSF50800 73 167 7.33E-25 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 Gene3D G3DSA:3.40.1380.20 324 467 1.6E-39 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PANTHER PTHR11817 3 475 2.7E-201 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 1.3E-27 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PRINTS PR01050 Pyruvate kinase family signature 62 78 1.7E-62 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PRINTS PR01050 Pyruvate kinase family signature 214 240 1.7E-62 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PRINTS PR01050 Pyruvate kinase family signature 241 265 1.7E-62 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PRINTS PR01050 Pyruvate kinase family signature 310 326 1.7E-62 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PRINTS PR01050 Pyruvate kinase family signature 291 309 1.7E-62 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PRINTS PR01050 Pyruvate kinase family signature 266 290 1.7E-62 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 PRINTS PR01050 Pyruvate kinase family signature 187 201 1.7E-62 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS17345 decc60845bcc1acdbde75a5863c38c3c 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 7.4E-153 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RMET_RS08540 cddf688525b5137391188ff455581f2d 157 Pfam PF13441 YMGG-like Gly-zipper 78 119 3.4E-9 T 22-04-2016 IPR027367 YMGG-like Gly-zipper RMET_RS19825 665ce74de241baba4c166bbeae22c758 102 Pfam PF02321 Outer membrane efflux protein 30 101 9.2E-9 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS19825 665ce74de241baba4c166bbeae22c758 102 Gene3D G3DSA:2.20.200.10 16 100 1.1E-28 T 22-04-2016 RMET_RS19825 665ce74de241baba4c166bbeae22c758 102 PANTHER PTHR30203:SF3 18 102 2.6E-23 T 22-04-2016 RMET_RS19825 665ce74de241baba4c166bbeae22c758 102 SUPERFAMILY SSF56954 1 101 1.24E-22 T 22-04-2016 RMET_RS19825 665ce74de241baba4c166bbeae22c758 102 PANTHER PTHR30203 18 102 2.6E-23 T 22-04-2016 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 PRINTS PR00073 Coprogen oxidase signature 163 192 5.4E-74 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 PRINTS PR00073 Coprogen oxidase signature 126 148 5.4E-74 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 PRINTS PR00073 Coprogen oxidase signature 91 115 5.4E-74 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 PRINTS PR00073 Coprogen oxidase signature 263 289 5.4E-74 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 PRINTS PR00073 Coprogen oxidase signature 235 262 5.4E-74 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 PRINTS PR00073 Coprogen oxidase signature 49 70 5.4E-74 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 PIRSF PIRSF000166 2 303 2.6E-117 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 Pfam PF01218 Coproporphyrinogen III oxidase 7 302 4.3E-123 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 PANTHER PTHR10755 7 303 3.3E-163 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 Gene3D G3DSA:3.40.1500.10 4 303 4.9E-125 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 278 54.097 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 167 191 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS03930 80a83547b0a0ac1aac66e2997c6acf79 303 SUPERFAMILY SSF102886 5 302 4.45E-129 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RMET_RS11970 f46ec8f1b3f7a4dd00d457f0b631e637 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 44 227 5.2E-68 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11970 f46ec8f1b3f7a4dd00d457f0b631e637 245 Pfam PF01578 Cytochrome C assembly protein 27 183 9.4E-28 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RMET_RS11970 f46ec8f1b3f7a4dd00d457f0b631e637 245 PANTHER PTHR30071 10 223 6.5E-62 T 22-04-2016 RMET_RS11970 f46ec8f1b3f7a4dd00d457f0b631e637 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 61 81 1.2E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11970 f46ec8f1b3f7a4dd00d457f0b631e637 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 120 140 1.2E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11970 f46ec8f1b3f7a4dd00d457f0b631e637 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 44 61 1.2E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11970 f46ec8f1b3f7a4dd00d457f0b631e637 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 155 181 1.2E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS11970 f46ec8f1b3f7a4dd00d457f0b631e637 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 99 119 1.2E-45 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RMET_RS03250 a7444b7d061f7d9497000f53c0c9be23 176 Pfam PF07811 TadE-like protein 17 59 6.6E-11 T 22-04-2016 IPR012495 TadE-like RMET_RS02480 74c52e96b3ecacd06c4f5f44c2a39ee8 146 SUPERFAMILY SSF54427 8 129 4.39E-21 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS02480 74c52e96b3ecacd06c4f5f44c2a39ee8 146 Pfam PF13474 SnoaL-like domain 12 129 8.8E-16 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RMET_RS02480 74c52e96b3ecacd06c4f5f44c2a39ee8 146 Gene3D G3DSA:3.10.450.50 8 130 4.2E-15 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS11645 8b96403dffd72dcf81b233a7cdb62b2a 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 8.5E-62 T 22-04-2016 IPR026325 Protein of unknown function DUF932 RMET_RS06130 ef13f630d3ca3714a173737c33d14d28 154 SUPERFAMILY SSF58113 58 141 3.66E-6 T 22-04-2016 RMET_RS06130 ef13f630d3ca3714a173737c33d14d28 154 Gene3D G3DSA:1.20.120.20 64 138 9.5E-4 T 22-04-2016 RMET_RS17845 4668cc49a2658486847c4d1b4620ab0d 303 Pfam PF01734 Patatin-like phospholipase 18 222 2.8E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RMET_RS17845 4668cc49a2658486847c4d1b4620ab0d 303 SUPERFAMILY SSF52151 18 137 8.89E-31 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS17845 4668cc49a2658486847c4d1b4620ab0d 303 SUPERFAMILY SSF52151 180 301 8.89E-31 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS05325 400d4cc68d81ca31b01080bc9e617db8 174 SUPERFAMILY SSF51161 4 168 1.3E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like RMET_RS05325 400d4cc68d81ca31b01080bc9e617db8 174 Gene3D G3DSA:2.160.10.10 7 167 3.5E-46 T 22-04-2016 RMET_RS05325 400d4cc68d81ca31b01080bc9e617db8 174 PANTHER PTHR13061 1 161 6.0E-63 T 22-04-2016 RMET_RS05325 400d4cc68d81ca31b01080bc9e617db8 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS05895 f4c6e1accb8c2904101ddf1ad32e366d 596 Gene3D G3DSA:3.40.30.10 278 420 1.2E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS05895 f4c6e1accb8c2904101ddf1ad32e366d 596 SUPERFAMILY SSF52833 274 415 5.98E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS05895 f4c6e1accb8c2904101ddf1ad32e366d 596 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 8 205 5.1E-13 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RMET_RS05895 f4c6e1accb8c2904101ddf1ad32e366d 596 Gene3D G3DSA:2.60.120.260 448 595 1.4E-48 T 22-04-2016 IPR008979 Galactose-binding domain-like RMET_RS05895 f4c6e1accb8c2904101ddf1ad32e366d 596 PANTHER PTHR13833 44 430 6.4E-42 T 22-04-2016 RMET_RS05895 f4c6e1accb8c2904101ddf1ad32e366d 596 Pfam PF00578 AhpC/TSA family 295 398 7.8E-11 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RMET_RS05895 f4c6e1accb8c2904101ddf1ad32e366d 596 PANTHER PTHR13833:SF51 44 430 6.4E-42 T 22-04-2016 RMET_RS14490 823c0ba0266ce9b4010b9564d86019d2 328 SUPERFAMILY SSF53850 117 284 8.4E-10 T 22-04-2016 RMET_RS14490 823c0ba0266ce9b4010b9564d86019d2 328 Gene3D G3DSA:3.40.190.10 142 230 3.0E-4 T 22-04-2016 RMET_RS14490 823c0ba0266ce9b4010b9564d86019d2 328 PIRSF PIRSF017082 1 327 6.3E-75 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS14490 823c0ba0266ce9b4010b9564d86019d2 328 PANTHER PTHR30349:SF16 1 299 9.2E-73 T 22-04-2016 RMET_RS14490 823c0ba0266ce9b4010b9564d86019d2 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 324 8.3E-92 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS14490 823c0ba0266ce9b4010b9564d86019d2 328 PANTHER PTHR30349 1 299 9.2E-73 T 22-04-2016 RMET_RS12265 afc81dde21bc607b86bbc3af6d58a78a 448 PANTHER PTHR30563 12 427 1.7E-87 T 22-04-2016 RMET_RS12265 afc81dde21bc607b86bbc3af6d58a78a 448 Pfam PF02646 RmuC family 134 419 1.0E-78 T 22-04-2016 IPR003798 DNA recombination RmuC RMET_RS12960 b39817790128cc25b032bd1d79123b1b 232 SUPERFAMILY SSF51182 1 231 1.28E-81 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS12960 b39817790128cc25b032bd1d79123b1b 232 PANTHER PTHR13903 1 231 1.1E-112 T 22-04-2016 IPR012093 Pirin RMET_RS12960 b39817790128cc25b032bd1d79123b1b 232 PIRSF PIRSF006232 1 230 2.3E-56 T 22-04-2016 IPR012093 Pirin RMET_RS12960 b39817790128cc25b032bd1d79123b1b 232 PANTHER PTHR13903:SF7 1 231 1.1E-112 T 22-04-2016 RMET_RS12960 b39817790128cc25b032bd1d79123b1b 232 Pfam PF02678 Pirin 7 119 3.1E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain RMET_RS12960 b39817790128cc25b032bd1d79123b1b 232 Gene3D G3DSA:2.60.120.10 3 231 6.0E-75 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS14135 672a734f2855fb834051d8ff2c9742aa 257 Pfam PF01925 Sulfite exporter TauE/SafE 7 255 1.5E-45 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RMET_RS14135 672a734f2855fb834051d8ff2c9742aa 257 PANTHER PTHR30269:SF2 1 256 4.2E-57 T 22-04-2016 RMET_RS14135 672a734f2855fb834051d8ff2c9742aa 257 PANTHER PTHR30269 1 256 4.2E-57 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 Gene3D G3DSA:2.40.160.20 32 286 2.2E-58 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 Pfam PF03922 OmpW family 77 286 7.2E-17 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 PANTHER PTHR36920 77 190 4.2E-14 T 22-04-2016 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 PANTHER PTHR36920 7 61 4.2E-14 T 22-04-2016 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 PANTHER PTHR36920 209 286 4.2E-14 T 22-04-2016 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 SUPERFAMILY SSF56925 213 286 5.49E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 SUPERFAMILY SSF56925 141 186 5.49E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 SUPERFAMILY SSF56925 69 115 5.49E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 PANTHER PTHR36920:SF1 77 190 4.2E-14 T 22-04-2016 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 PANTHER PTHR36920:SF1 7 61 4.2E-14 T 22-04-2016 RMET_RS18040 eb084537c390c171d5f234e27b6f7bbf 286 PANTHER PTHR36920:SF1 209 286 4.2E-14 T 22-04-2016 RMET_RS18090 d07a31a6777f20aa044617a02b6a5346 290 Pfam PF10118 Predicted metal-dependent hydrolase 6 255 4.8E-79 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RMET_RS18090 d07a31a6777f20aa044617a02b6a5346 290 PANTHER PTHR39456:SF2 20 281 3.4E-55 T 22-04-2016 RMET_RS18090 d07a31a6777f20aa044617a02b6a5346 290 PIRSF PIRSF007580 1 269 4.6E-66 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RMET_RS18090 d07a31a6777f20aa044617a02b6a5346 290 PANTHER PTHR39456 20 281 3.4E-55 T 22-04-2016 RMET_RS17810 3687b1ba26ab39ba3c67103c43e9f9b5 398 Gene3D G3DSA:1.20.1250.20 15 191 1.4E-20 T 22-04-2016 RMET_RS17810 3687b1ba26ab39ba3c67103c43e9f9b5 398 Pfam PF07690 Major Facilitator Superfamily 32 300 4.1E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS17810 3687b1ba26ab39ba3c67103c43e9f9b5 398 Gene3D G3DSA:1.20.1250.20 223 391 1.7E-13 T 22-04-2016 RMET_RS17810 3687b1ba26ab39ba3c67103c43e9f9b5 398 SUPERFAMILY SSF103473 13 391 9.55E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS17810 3687b1ba26ab39ba3c67103c43e9f9b5 398 PANTHER PTHR23501:SF56 15 391 1.8E-134 T 22-04-2016 RMET_RS17810 3687b1ba26ab39ba3c67103c43e9f9b5 398 PANTHER PTHR23501 15 391 1.8E-134 T 22-04-2016 RMET_RS15420 f8e9319554bf205887290cb2ae32809f 132 Gene3D G3DSA:3.30.429.20 1 61 1.2E-7 T 22-04-2016 RMET_RS15420 f8e9319554bf205887290cb2ae32809f 132 SUPERFAMILY SSF55331 2 127 2.51E-19 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RMET_RS09795 2902cb211613fc395975c8583700ef8e 274 PANTHER PTHR32125 23 267 6.0E-58 T 22-04-2016 RMET_RS09795 2902cb211613fc395975c8583700ef8e 274 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 35 266 2.0E-56 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS09795 2902cb211613fc395975c8583700ef8e 274 PANTHER PTHR32125:SF4 23 267 6.0E-58 T 22-04-2016 RMET_RS09795 2902cb211613fc395975c8583700ef8e 274 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 136 143 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS09795 2902cb211613fc395975c8583700ef8e 274 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 35 264 2.2E-61 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS09795 2902cb211613fc395975c8583700ef8e 274 SUPERFAMILY SSF53448 34 265 8.79E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS09795 2902cb211613fc395975c8583700ef8e 274 Gene3D G3DSA:3.90.550.10 34 266 4.2E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RMET_RS09795 2902cb211613fc395975c8583700ef8e 274 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 32 268 29.78 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 PANTHER PTHR11061 23 491 3.5E-99 T 22-04-2016 RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 SUPERFAMILY SSF53335 113 490 6.31E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 Gene3D G3DSA:2.40.50.140 50 125 7.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 50 491 68.775 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 473 483 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 Gene3D G3DSA:3.40.50.150 297 490 5.4E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 SUPERFAMILY SSF50249 50 111 9.14E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 137 489 1.3E-15 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RMET_RS10575 430a4fba0e5b2d5af7dab8bca2c12938 491 PANTHER PTHR11061:SF30 23 491 3.5E-99 T 22-04-2016 RMET_RS07910 5c5bf29d17a9919ea89c7bc0d2b0657c 158 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 149 7.4E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RMET_RS07910 5c5bf29d17a9919ea89c7bc0d2b0657c 158 PANTHER PTHR12589 4 156 5.5E-31 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RMET_RS07910 5c5bf29d17a9919ea89c7bc0d2b0657c 158 SUPERFAMILY SSF55620 4 148 2.84E-37 T 22-04-2016 RMET_RS07910 5c5bf29d17a9919ea89c7bc0d2b0657c 158 Gene3D G3DSA:3.30.479.10 2 148 2.2E-36 T 22-04-2016 RMET_RS06010 d12b9d905978a6071d92194d91216bbb 700 Gene3D G3DSA:1.10.1370.10 148 360 2.9E-135 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RMET_RS06010 d12b9d905978a6071d92194d91216bbb 700 Gene3D G3DSA:1.10.1370.10 515 694 2.9E-135 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RMET_RS06010 d12b9d905978a6071d92194d91216bbb 700 Gene3D G3DSA:3.40.390.10 371 514 5.1E-56 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RMET_RS06010 d12b9d905978a6071d92194d91216bbb 700 PANTHER PTHR11804 4 695 3.0E-277 T 22-04-2016 RMET_RS06010 d12b9d905978a6071d92194d91216bbb 700 PANTHER PTHR11804:SF8 4 695 3.0E-277 T 22-04-2016 RMET_RS06010 d12b9d905978a6071d92194d91216bbb 700 SUPERFAMILY SSF55486 9 692 6.8E-190 T 22-04-2016 RMET_RS06010 d12b9d905978a6071d92194d91216bbb 700 Pfam PF01432 Peptidase family M3 229 690 9.8E-143 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RMET_RS06010 d12b9d905978a6071d92194d91216bbb 700 Gene3D G3DSA:1.20.1050.40 19 145 2.4E-16 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RMET_RS00630 5d26335eb34da2e92de0647bc5a47115 719 Gene3D G3DSA:2.40.170.20 177 717 1.6E-65 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS00630 5d26335eb34da2e92de0647bc5a47115 719 Pfam PF00593 TonB dependent receptor 457 716 2.1E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RMET_RS00630 5d26335eb34da2e92de0647bc5a47115 719 SUPERFAMILY SSF56935 58 719 3.87E-91 T 22-04-2016 RMET_RS00630 5d26335eb34da2e92de0647bc5a47115 719 PANTHER PTHR30069:SF13 60 502 1.1E-156 T 22-04-2016 RMET_RS00630 5d26335eb34da2e92de0647bc5a47115 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 175 1.3E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS00630 5d26335eb34da2e92de0647bc5a47115 719 PANTHER PTHR30069 60 502 1.1E-156 T 22-04-2016 RMET_RS00630 5d26335eb34da2e92de0647bc5a47115 719 Gene3D G3DSA:2.170.130.10 48 176 2.6E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RMET_RS01230 1f606a5e52c128c0737445e5dc6cbc1a 431 Pfam PF08886 Glutamate-cysteine ligase 17 422 1.0E-199 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA RMET_RS01230 1f606a5e52c128c0737445e5dc6cbc1a 431 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 425 7.3E-207 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA RMET_RS11065 ad4ea140b9849f48c35c62909063e216 342 Gene3D G3DSA:3.20.20.190 43 333 2.5E-46 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RMET_RS11065 ad4ea140b9849f48c35c62909063e216 342 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 63 324 3.4E-19 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RMET_RS11065 ad4ea140b9849f48c35c62909063e216 342 SUPERFAMILY SSF51695 57 328 3.92E-46 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RMET_RS11065 ad4ea140b9849f48c35c62909063e216 342 PANTHER PTHR23344:SF2 54 333 2.8E-90 T 22-04-2016 RMET_RS11065 ad4ea140b9849f48c35c62909063e216 342 PANTHER PTHR23344 54 333 2.8E-90 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RMET_RS17585 0c7a1057e5fa3a2de99e4b556701fdc4 88 SUPERFAMILY SSF81333 7 82 1.44E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RMET_RS17585 0c7a1057e5fa3a2de99e4b556701fdc4 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 13.863 T 22-04-2016 RMET_RS17585 0c7a1057e5fa3a2de99e4b556701fdc4 88 Gene3D G3DSA:1.20.20.10 7 82 1.2E-34 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RMET_RS17585 0c7a1057e5fa3a2de99e4b556701fdc4 88 Pfam PF00137 ATP synthase subunit C 14 76 3.4E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RMET_RS17585 0c7a1057e5fa3a2de99e4b556701fdc4 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 1.8E-20 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RMET_RS17585 0c7a1057e5fa3a2de99e4b556701fdc4 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RMET_RS10755 2a17b1e1ff9783f49da10f31e0ef4800 226 SUPERFAMILY SSF54001 67 193 3.92E-41 T 22-04-2016 RMET_RS10755 2a17b1e1ff9783f49da10f31e0ef4800 226 Pfam PF00877 NlpC/P60 family 85 192 1.2E-29 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RMET_RS10755 2a17b1e1ff9783f49da10f31e0ef4800 226 PANTHER PTHR21666 61 195 1.2E-37 T 22-04-2016 RMET_RS10755 2a17b1e1ff9783f49da10f31e0ef4800 226 Gene3D G3DSA:3.90.1720.10 68 195 1.7E-44 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RMET_RS15825 3cadfe1baa9a3845d32214a72eb4aa6b 306 Pfam PF11249 Protein of unknown function (DUF3047) 110 303 3.4E-60 T 22-04-2016 IPR021409 Protein of unknown function DUF3047 RMET_RS02110 0372c2e46c972353b4e82c71d6964faf 156 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 150 32.966 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RMET_RS02110 0372c2e46c972353b4e82c71d6964faf 156 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 150 6.2E-55 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RMET_RS02110 0372c2e46c972353b4e82c71d6964faf 156 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 148 1.5E-48 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RMET_RS02110 0372c2e46c972353b4e82c71d6964faf 156 Gene3D G3DSA:3.50.80.10 1 148 6.6E-52 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RMET_RS02110 0372c2e46c972353b4e82c71d6964faf 156 PANTHER PTHR10472 2 148 2.5E-63 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RMET_RS02110 0372c2e46c972353b4e82c71d6964faf 156 SUPERFAMILY SSF69500 1 149 7.72E-51 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RMET_RS04740 c4000142da7383d72f774163b85c6b1c 211 Pfam PF00293 NUDIX domain 56 165 1.6E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS04740 c4000142da7383d72f774163b85c6b1c 211 Gene3D G3DSA:3.90.79.10 19 188 1.4E-52 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS04740 c4000142da7383d72f774163b85c6b1c 211 PANTHER PTHR11839:SF9 27 186 1.5E-47 T 22-04-2016 RMET_RS04740 c4000142da7383d72f774163b85c6b1c 211 SUPERFAMILY SSF55811 23 187 7.04E-46 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS04740 c4000142da7383d72f774163b85c6b1c 211 PANTHER PTHR11839 27 186 1.5E-47 T 22-04-2016 RMET_RS08615 97b6555316745f929c0425cbd1491f8e 327 PANTHER PTHR30349 1 282 3.3E-65 T 22-04-2016 RMET_RS08615 97b6555316745f929c0425cbd1491f8e 327 PANTHER PTHR30349:SF16 1 282 3.3E-65 T 22-04-2016 RMET_RS08615 97b6555316745f929c0425cbd1491f8e 327 PIRSF PIRSF017082 1 323 2.7E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08615 97b6555316745f929c0425cbd1491f8e 327 SUPERFAMILY SSF53850 116 292 4.12E-12 T 22-04-2016 RMET_RS08615 97b6555316745f929c0425cbd1491f8e 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 319 3.1E-69 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS02530 c35f55c636ec9a433ce73f7d8fec7d4e 350 SUPERFAMILY SSF46894 291 350 9.86E-7 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS02530 c35f55c636ec9a433ce73f7d8fec7d4e 350 Gene3D G3DSA:1.10.10.10 300 350 8.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06700 bd656a0847bb298c3bc6c5a2737ea606 519 SUPERFAMILY SSF47240 3 514 1.45E-162 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS06700 bd656a0847bb298c3bc6c5a2737ea606 519 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 25 253 4.9E-68 T 22-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 RMET_RS06700 bd656a0847bb298c3bc6c5a2737ea606 519 Pfam PF04945 YHS domain 411 453 5.4E-14 T 22-04-2016 IPR007029 YHS domain RMET_RS06700 bd656a0847bb298c3bc6c5a2737ea606 519 Gene3D G3DSA:1.10.620.20 4 511 5.9E-207 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS05430 95ad37aad47f19bee027c790a8b0a8a9 247 Gene3D G3DSA:1.10.3130.10 1 62 1.2E-23 T 22-04-2016 RMET_RS05430 95ad37aad47f19bee027c790a8b0a8a9 247 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 5.8E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RMET_RS05430 95ad37aad47f19bee027c790a8b0a8a9 247 SUPERFAMILY SSF51161 2 169 1.01E-50 T 22-04-2016 IPR011004 Trimeric LpxA-like RMET_RS05430 95ad37aad47f19bee027c790a8b0a8a9 247 Gene3D G3DSA:2.160.10.10 63 186 3.4E-34 T 22-04-2016 RMET_RS05430 95ad37aad47f19bee027c790a8b0a8a9 247 PANTHER PTHR23416 1 229 5.1E-91 T 22-04-2016 RMET_RS05430 95ad37aad47f19bee027c790a8b0a8a9 247 PANTHER PTHR23416:SF55 1 229 5.1E-91 T 22-04-2016 RMET_RS05430 95ad37aad47f19bee027c790a8b0a8a9 247 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 167 4.0E-70 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 PANTHER PTHR13789:SF219 8 450 1.1E-190 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 Gene3D G3DSA:3.30.9.10 355 383 4.4E-10 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 Gene3D G3DSA:3.30.9.10 195 300 4.4E-10 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 PANTHER PTHR13789 8 450 1.1E-190 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 Gene3D G3DSA:3.50.50.60 33 194 7.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 Gene3D G3DSA:3.50.50.60 305 345 7.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 322 4.9E-36 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 340 358 4.9E-36 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 34 56 4.9E-36 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 338 4.9E-36 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 182 197 4.9E-36 T 22-04-2016 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 Pfam PF01494 FAD binding domain 34 369 1.4E-63 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 SUPERFAMILY SSF51905 294 405 4.43E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS01720 7dfc0c89acc9c724811bc9efa92195ab 584 SUPERFAMILY SSF51905 33 203 4.43E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS02100 bac2c1da571d5546d6c38868cb6e481c 464 PANTHER PTHR21666:SF221 179 440 1.0E-49 T 22-04-2016 RMET_RS02100 bac2c1da571d5546d6c38868cb6e481c 464 PANTHER PTHR21666 179 440 1.0E-49 T 22-04-2016 RMET_RS02100 bac2c1da571d5546d6c38868cb6e481c 464 SUPERFAMILY SSF51261 178 422 5.75E-66 T 22-04-2016 IPR011055 Duplicated hybrid motif RMET_RS02100 bac2c1da571d5546d6c38868cb6e481c 464 Pfam PF01551 Peptidase family M23 326 421 3.2E-33 T 22-04-2016 IPR016047 Peptidase M23 RMET_RS02100 bac2c1da571d5546d6c38868cb6e481c 464 Gene3D G3DSA:2.70.70.10 285 423 1.1E-47 T 22-04-2016 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 317 4.4E-106 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 PANTHER PTHR38418 1 200 2.9E-38 T 22-04-2016 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 SMART SM00116 278 326 0.0042 T 22-04-2016 IPR000644 CBS domain RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 SMART SM00116 213 261 0.46 T 22-04-2016 IPR000644 CBS domain RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 PANTHER PTHR38418:SF1 1 200 2.9E-38 T 22-04-2016 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 Pfam PF01380 SIS domain 46 175 3.1E-29 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 Gene3D G3DSA:3.40.50.10490 14 197 5.9E-49 T 22-04-2016 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 Gene3D G3DSA:3.10.580.10 198 324 1.5E-39 T 22-04-2016 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 SUPERFAMILY SSF53697 11 324 9.57E-67 T 22-04-2016 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 PIRSF PIRSF004692 2 327 2.5E-131 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 Pfam PF00571 CBS domain 204 260 7.8E-7 T 22-04-2016 IPR000644 CBS domain RMET_RS01560 cc17f9bda5bd36027027b631bce61ec2 327 Pfam PF00571 CBS domain 271 324 4.3E-10 T 22-04-2016 IPR000644 CBS domain RMET_RS14055 d0e173f06db46b327f203fbb52d39573 341 PANTHER PTHR22726:SF7 6 338 1.4E-51 T 22-04-2016 RMET_RS14055 d0e173f06db46b327f203fbb52d39573 341 PANTHER PTHR22726 6 338 1.4E-51 T 22-04-2016 RMET_RS14055 d0e173f06db46b327f203fbb52d39573 341 Gene3D G3DSA:3.30.2010.10 190 236 5.6E-9 T 22-04-2016 RMET_RS14055 d0e173f06db46b327f203fbb52d39573 341 Pfam PF01435 Peptidase family M48 167 338 3.0E-22 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RMET_RS05270 d8192ffbff4ec7189ad011a396f62cd5 317 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 311 2.6E-106 T 22-04-2016 IPR007296 Domain of unknown function DUF403 RMET_RS05270 d8192ffbff4ec7189ad011a396f62cd5 317 PANTHER PTHR34595 1 312 2.4E-100 T 22-04-2016 RMET_RS05085 cc4d8c29ced04a01768a0357128b5e7c 322 Gene3D G3DSA:3.40.50.1820 38 305 2.7E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05085 cc4d8c29ced04a01768a0357128b5e7c 322 SUPERFAMILY SSF53474 37 310 3.85E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05085 cc4d8c29ced04a01768a0357128b5e7c 322 PANTHER PTHR10992 42 315 2.8E-42 T 22-04-2016 RMET_RS05085 cc4d8c29ced04a01768a0357128b5e7c 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 101 4.3E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05085 cc4d8c29ced04a01768a0357128b5e7c 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 4.3E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05085 cc4d8c29ced04a01768a0357128b5e7c 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 4.3E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05085 cc4d8c29ced04a01768a0357128b5e7c 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 259 273 4.3E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05085 cc4d8c29ced04a01768a0357128b5e7c 322 Pfam PF00561 alpha/beta hydrolase fold 60 169 6.3E-25 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS03870 4a6d83576e5eb93337c4ff7c975d2f28 155 SUPERFAMILY SSF55729 24 150 2.36E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS03870 4a6d83576e5eb93337c4ff7c975d2f28 155 PANTHER PTHR23091 23 149 4.2E-18 T 22-04-2016 RMET_RS03870 4a6d83576e5eb93337c4ff7c975d2f28 155 Pfam PF00583 Acetyltransferase (GNAT) family 65 145 1.8E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS03870 4a6d83576e5eb93337c4ff7c975d2f28 155 Gene3D G3DSA:3.40.630.30 9 153 3.9E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS12940 273be9578938f2b22a0e8a8d0a8b9682 416 Pfam PF01435 Peptidase family M48 206 413 5.7E-42 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RMET_RS12940 273be9578938f2b22a0e8a8d0a8b9682 416 PANTHER PTHR10120:SF24 3 412 1.1E-117 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 RMET_RS12940 273be9578938f2b22a0e8a8d0a8b9682 416 Gene3D G3DSA:3.30.2010.10 200 292 9.5E-22 T 22-04-2016 RMET_RS12940 273be9578938f2b22a0e8a8d0a8b9682 416 PANTHER PTHR10120 3 412 1.1E-117 T 22-04-2016 RMET_RS12940 273be9578938f2b22a0e8a8d0a8b9682 416 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 24 203 2.5E-56 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 RMET_RS29800 1c90964fd277dcfab5e5dfb1ca1da788 74 Gene3D G3DSA:3.40.630.10 30 74 2.1E-9 T 22-04-2016 RMET_RS29800 1c90964fd277dcfab5e5dfb1ca1da788 74 Gene3D G3DSA:3.30.70.360 2 29 8.4E-4 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RMET_RS29800 1c90964fd277dcfab5e5dfb1ca1da788 74 SUPERFAMILY SSF53187 13 74 2.67E-5 T 22-04-2016 RMET_RS13115 969941409b464aeed11f3224fa3acbf0 149 PANTHER PTHR28055:SF1 1 149 1.6E-53 T 22-04-2016 RMET_RS13115 969941409b464aeed11f3224fa3acbf0 149 SUPERFAMILY SSF89095 1 146 1.26E-43 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RMET_RS13115 969941409b464aeed11f3224fa3acbf0 149 Gene3D G3DSA:1.10.10.410 91 147 6.0E-23 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RMET_RS13115 969941409b464aeed11f3224fa3acbf0 149 Gene3D G3DSA:1.10.1510.10 1 90 1.6E-34 T 22-04-2016 RMET_RS13115 969941409b464aeed11f3224fa3acbf0 149 Pfam PF09424 Yqey-like protein 4 146 4.0E-56 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial RMET_RS13115 969941409b464aeed11f3224fa3acbf0 149 PANTHER PTHR28055 1 149 1.6E-53 T 22-04-2016 RMET_RS07700 c74a9e9a237efc252ee37f3251b89fde 101 PANTHER PTHR10160 10 91 3.5E-15 T 22-04-2016 RMET_RS07700 c74a9e9a237efc252ee37f3251b89fde 101 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 91 2.3E-30 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 RMET_RS06970 3938750b586cadfbb3865edf7c24afd6 138 Gene3D G3DSA:3.10.490.10 2 133 1.5E-26 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RMET_RS06970 3938750b586cadfbb3865edf7c24afd6 138 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 127 3.7E-19 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like RMET_RS06970 3938750b586cadfbb3865edf7c24afd6 138 SUPERFAMILY SSF110857 1 133 1.83E-27 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RMET_RS14410 5da3fff7861155cb8dac22ce0046f4d1 384 SUPERFAMILY SSF142754 47 357 4.45E-108 T 22-04-2016 RMET_RS14410 5da3fff7861155cb8dac22ce0046f4d1 384 Hamap MF_00567 Quinolinate synthase A [nadA]. 7 363 66.475 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RMET_RS14410 5da3fff7861155cb8dac22ce0046f4d1 384 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 45 357 2.3E-111 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RMET_RS14410 5da3fff7861155cb8dac22ce0046f4d1 384 Pfam PF02445 Quinolinate synthetase A protein 50 356 2.8E-103 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RMET_RS14410 5da3fff7861155cb8dac22ce0046f4d1 384 PANTHER PTHR30573 35 380 3.3E-148 T 22-04-2016 RMET_RS05065 5e399220fdbef959bb6e000e34186452 143 Pfam PF08897 Domain of unknown function (DUF1841) 5 139 7.5E-61 T 22-04-2016 IPR014993 Protein of unknown function DUF1841 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 465 2.6E-143 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 5 467 36.303 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 Gene3D G3DSA:1.20.120.640 310 391 4.0E-9 T 22-04-2016 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 SMART SM00840 342 401 1.6E-10 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 SUPERFAMILY SSF47323 329 466 2.22E-24 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 Pfam PF09190 DALR domain 343 400 1.4E-7 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 PANTHER PTHR10890 5 468 4.8E-197 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 SUPERFAMILY SSF52374 6 314 3.33E-90 T 22-04-2016 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 Gene3D G3DSA:3.40.50.620 22 307 3.0E-99 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 1.3E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 64 73 1.3E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 1.3E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 28 39 1.3E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RMET_RS05535 e36bad22b04643e9c5bdc624faf2fc96 472 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 21 314 4.2E-113 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RMET_RS12730 a23993db301fbfc106e29f6a4db1175a 382 SUPERFAMILY SSF56935 21 382 1.07E-71 T 22-04-2016 RMET_RS12730 a23993db301fbfc106e29f6a4db1175a 382 Pfam PF13609 Gram-negative porin 8 347 5.1E-44 T 22-04-2016 RMET_RS12730 a23993db301fbfc106e29f6a4db1175a 382 Gene3D G3DSA:2.40.160.10 21 382 1.6E-78 T 22-04-2016 IPR023614 Porin domain RMET_RS29380 478703b1e7f2f81fa8e7cf7825646bee 171 SUPERFAMILY SSF55008 17 79 1.44E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS29380 478703b1e7f2f81fa8e7cf7825646bee 171 Pfam PF00403 Heavy-metal-associated domain 119 158 2.6E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS29380 478703b1e7f2f81fa8e7cf7825646bee 171 Pfam PF00403 Heavy-metal-associated domain 19 64 1.0E-7 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS29380 478703b1e7f2f81fa8e7cf7825646bee 171 SUPERFAMILY SSF55008 116 166 3.93E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RMET_RS29380 478703b1e7f2f81fa8e7cf7825646bee 171 Gene3D G3DSA:3.30.70.100 18 80 1.7E-9 T 22-04-2016 RMET_RS29380 478703b1e7f2f81fa8e7cf7825646bee 171 Gene3D G3DSA:3.30.70.100 117 161 1.5E-6 T 22-04-2016 RMET_RS11710 d855c479f53ce35f46744f9fac99925f 196 SUPERFAMILY SSF53955 103 176 4.13E-16 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS11710 d855c479f53ce35f46744f9fac99925f 196 SUPERFAMILY SSF53955 33 75 4.13E-16 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS11710 d855c479f53ce35f46744f9fac99925f 196 Pfam PF01464 Transglycosylase SLT domain 36 157 1.6E-6 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RMET_RS11710 d855c479f53ce35f46744f9fac99925f 196 Gene3D G3DSA:1.10.530.10 34 157 1.3E-11 T 22-04-2016 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 SUPERFAMILY SSF51905 16 296 5.34E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 SUPERFAMILY SSF51905 466 522 5.34E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 PANTHER PTHR11552:SF92 7 517 7.8E-137 T 22-04-2016 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 Pfam PF05199 GMC oxidoreductase 384 519 8.9E-21 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 PANTHER PTHR11552 7 517 7.8E-137 T 22-04-2016 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 Pfam PF00732 GMC oxidoreductase 35 297 3.7E-44 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 Gene3D G3DSA:3.50.50.60 460 524 2.8E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 Gene3D G3DSA:3.50.50.60 194 298 2.8E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 Gene3D G3DSA:3.50.50.60 30 149 2.8E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS18065 db68f2366946c92439a91c8d463d0158 531 Gene3D G3DSA:3.50.50.60 400 413 2.8E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS12045 309eaaf8afbf329d02c79050e65047a2 441 SUPERFAMILY SSF56349 5 199 1.82E-30 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS12045 309eaaf8afbf329d02c79050e65047a2 441 PANTHER PTHR30629 2 232 5.5E-82 T 22-04-2016 RMET_RS12045 309eaaf8afbf329d02c79050e65047a2 441 PANTHER PTHR30629:SF4 2 232 5.5E-82 T 22-04-2016 RMET_RS12045 309eaaf8afbf329d02c79050e65047a2 441 Gene3D G3DSA:1.10.443.10 11 192 1.1E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS12045 309eaaf8afbf329d02c79050e65047a2 441 Pfam PF00589 Phage integrase family 13 189 1.0E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS09260 a9b8d7a532ea288965fc06f5e5b543a4 143 Gene3D G3DSA:3.10.129.10 7 126 8.5E-32 T 22-04-2016 IPR029069 HotDog domain RMET_RS09260 a9b8d7a532ea288965fc06f5e5b543a4 143 Pfam PF03061 Thioesterase superfamily 43 115 4.5E-12 T 22-04-2016 IPR006683 Thioesterase domain RMET_RS09260 a9b8d7a532ea288965fc06f5e5b543a4 143 SUPERFAMILY SSF54637 7 127 1.71E-29 T 22-04-2016 IPR029069 HotDog domain RMET_RS09260 a9b8d7a532ea288965fc06f5e5b543a4 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 10 121 2.2E-20 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RMET_RS09260 a9b8d7a532ea288965fc06f5e5b543a4 143 PANTHER PTHR12418 21 138 5.1E-23 T 22-04-2016 RMET_RS13555 7d006c6fb7e273354530ad047f787fb0 218 PANTHER PTHR11260:SF144 1 199 8.6E-56 T 22-04-2016 RMET_RS13555 7d006c6fb7e273354530ad047f787fb0 218 SUPERFAMILY SSF52833 6 87 7.18E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13555 7d006c6fb7e273354530ad047f787fb0 218 PANTHER PTHR11260 1 199 8.6E-56 T 22-04-2016 RMET_RS13555 7d006c6fb7e273354530ad047f787fb0 218 Gene3D G3DSA:3.40.30.10 4 97 3.6E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS13555 7d006c6fb7e273354530ad047f787fb0 218 SUPERFAMILY SSF47616 85 205 4.55E-21 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS13555 7d006c6fb7e273354530ad047f787fb0 218 Gene3D G3DSA:1.20.1050.10 98 208 4.6E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RMET_RS13555 7d006c6fb7e273354530ad047f787fb0 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 81 2.9E-9 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RMET_RS13555 7d006c6fb7e273354530ad047f787fb0 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 202 3.7E-6 T 22-04-2016 RMET_RS14870 34943b5b296447919e610c881730835f 349 SMART SM00448 67 169 0.0071 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14870 34943b5b296447919e610c881730835f 349 SUPERFAMILY SSF52172 103 173 2.13E-13 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS14870 34943b5b296447919e610c881730835f 349 SUPERFAMILY SSF52172 20 57 2.13E-13 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS14870 34943b5b296447919e610c881730835f 349 Pfam PF00072 Response regulator receiver domain 101 164 7.5E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS14870 34943b5b296447919e610c881730835f 349 Gene3D G3DSA:3.40.50.2300 21 57 1.1E-16 T 22-04-2016 RMET_RS14870 34943b5b296447919e610c881730835f 349 Gene3D G3DSA:3.40.50.2300 103 175 1.1E-16 T 22-04-2016 RMET_RS26000 9baad0c29859e97fca98bafc62bf871a 142 PANTHER PTHR18968 15 139 1.4E-76 T 22-04-2016 RMET_RS26000 9baad0c29859e97fca98bafc62bf871a 142 Gene3D G3DSA:3.40.50.970 11 141 2.7E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS26000 9baad0c29859e97fca98bafc62bf871a 142 PANTHER PTHR18968:SF120 15 139 1.4E-76 T 22-04-2016 RMET_RS26000 9baad0c29859e97fca98bafc62bf871a 142 SUPERFAMILY SSF52518 9 141 9.82E-38 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RMET_RS26000 9baad0c29859e97fca98bafc62bf871a 142 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 16 141 1.3E-36 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RMET_RS22035 2e3141b42438a0bb7bfa71ad57aa8436 284 SUPERFAMILY SSF75625 258 284 5.1E-6 T 22-04-2016 IPR029072 YebC-like RMET_RS22035 2e3141b42438a0bb7bfa71ad57aa8436 284 Gene3D G3DSA:1.10.10.200 256 284 1.0E-9 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RMET_RS01025 6f133ee3d2d95d07c61fff0642c127e2 217 PANTHER PTHR11670:SF27 1 199 1.3E-64 T 22-04-2016 RMET_RS01025 6f133ee3d2d95d07c61fff0642c127e2 217 SUPERFAMILY SSF52016 2 191 4.71E-47 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS01025 6f133ee3d2d95d07c61fff0642c127e2 217 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 34.64 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01025 6f133ee3d2d95d07c61fff0642c127e2 217 Pfam PF00694 Aconitase C-terminal domain 3 123 1.7E-28 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01025 6f133ee3d2d95d07c61fff0642c127e2 217 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 4.3E-56 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS01025 6f133ee3d2d95d07c61fff0642c127e2 217 Gene3D G3DSA:3.20.19.10 7 193 1.8E-34 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RMET_RS01025 6f133ee3d2d95d07c61fff0642c127e2 217 PANTHER PTHR11670 1 199 1.3E-64 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RMET_RS10145 0904c6a82a30b115e9ffe8314656fe69 413 PANTHER PTHR30386 1 376 2.6E-153 T 22-04-2016 RMET_RS10145 0904c6a82a30b115e9ffe8314656fe69 413 Pfam PF13533 Biotin-lipoyl like 61 109 2.2E-10 T 22-04-2016 RMET_RS10145 0904c6a82a30b115e9ffe8314656fe69 413 Gene3D G3DSA:2.40.50.100 61 94 3.2E-17 T 22-04-2016 RMET_RS10145 0904c6a82a30b115e9ffe8314656fe69 413 Gene3D G3DSA:2.40.50.100 215 248 3.2E-17 T 22-04-2016 RMET_RS10145 0904c6a82a30b115e9ffe8314656fe69 413 SUPERFAMILY SSF111369 179 267 3.4E-8 T 22-04-2016 RMET_RS10145 0904c6a82a30b115e9ffe8314656fe69 413 SUPERFAMILY SSF111369 57 115 7.59E-8 T 22-04-2016 RMET_RS10145 0904c6a82a30b115e9ffe8314656fe69 413 PANTHER PTHR30386:SF6 1 376 2.6E-153 T 22-04-2016 RMET_RS10145 0904c6a82a30b115e9ffe8314656fe69 413 Pfam PF13437 HlyD family secretion protein 218 338 2.1E-14 T 22-04-2016 RMET_RS07530 e036bb8ba1cdc1158f791484bb278105 67 SUPERFAMILY SSF56784 2 52 1.49E-7 T 22-04-2016 IPR023214 HAD-like domain RMET_RS07530 e036bb8ba1cdc1158f791484bb278105 67 Gene3D G3DSA:3.40.50.1000 2 53 9.9E-9 T 22-04-2016 IPR023214 HAD-like domain RMET_RS04985 5a13310cb489fa4d8a1443a5337b4625 486 PANTHER PTHR30624:SF4 22 486 4.6E-222 T 22-04-2016 RMET_RS04985 5a13310cb489fa4d8a1443a5337b4625 486 SUPERFAMILY SSF111283 28 485 6.02E-133 T 22-04-2016 RMET_RS04985 5a13310cb489fa4d8a1443a5337b4625 486 PIRSF PIRSF004919 23 486 1.1E-138 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RMET_RS04985 5a13310cb489fa4d8a1443a5337b4625 486 PANTHER PTHR30624 22 486 4.6E-222 T 22-04-2016 RMET_RS04985 5a13310cb489fa4d8a1443a5337b4625 486 Pfam PF01523 Putative modulator of DNA gyrase 43 337 3.3E-66 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RMET_RS28885 8890ad35b58c70f303eef320fdfb8588 142 PANTHER PTHR24095 1 142 2.4E-67 T 22-04-2016 RMET_RS28885 8890ad35b58c70f303eef320fdfb8588 142 PANTHER PTHR24095:SF165 1 142 2.4E-67 T 22-04-2016 RMET_RS28885 8890ad35b58c70f303eef320fdfb8588 142 SUPERFAMILY SSF56801 2 142 1.57E-31 T 22-04-2016 RMET_RS28885 8890ad35b58c70f303eef320fdfb8588 142 Gene3D G3DSA:3.40.50.980 2 79 3.2E-12 T 22-04-2016 RMET_RS28885 8890ad35b58c70f303eef320fdfb8588 142 Pfam PF00501 AMP-binding enzyme 2 140 6.0E-21 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS26950 813b168c8be8c4cc54e169d3c2d48c95 100 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 1 100 5.2E-33 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS26950 813b168c8be8c4cc54e169d3c2d48c95 100 PANTHER PTHR30349 1 100 7.1E-29 T 22-04-2016 RMET_RS26950 813b168c8be8c4cc54e169d3c2d48c95 100 PANTHER PTHR30349:SF32 1 100 7.1E-29 T 22-04-2016 RMET_RS29925 7e6a4722bb1483e710334221c8926712 142 SUPERFAMILY SSF52402 2 93 7.78E-5 T 22-04-2016 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 Gene3D G3DSA:3.40.190.10 85 196 3.7E-17 T 22-04-2016 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 PANTHER PTHR30126 4 310 7.0E-52 T 22-04-2016 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.2E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 SUPERFAMILY SSF46785 5 87 5.75E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 Gene3D G3DSA:1.10.10.10 5 84 4.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 SUPERFAMILY SSF53850 95 298 5.7E-27 T 22-04-2016 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 Gene3D G3DSA:3.40.190.10 197 270 2.7E-10 T 22-04-2016 RMET_RS08205 b815cec982007862a1f04f0d98811cbe 311 Pfam PF03466 LysR substrate binding domain 95 292 2.1E-28 T 22-04-2016 IPR005119 LysR, substrate-binding RMET_RS03955 d46f6d16b50645117cb2ce71a7783f08 329 PANTHER PTHR30349:SF16 9 291 2.7E-100 T 22-04-2016 RMET_RS03955 d46f6d16b50645117cb2ce71a7783f08 329 PIRSF PIRSF017082 3 329 3.3E-85 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS03955 d46f6d16b50645117cb2ce71a7783f08 329 SUPERFAMILY SSF53850 117 289 3.16E-12 T 22-04-2016 RMET_RS03955 d46f6d16b50645117cb2ce71a7783f08 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 325 7.2E-92 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS03955 d46f6d16b50645117cb2ce71a7783f08 329 PANTHER PTHR30349 9 291 2.7E-100 T 22-04-2016 RMET_RS06390 e1556d91c97512852b652e4a013e888e 512 Pfam PF02321 Outer membrane efflux protein 305 484 3.0E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS06390 e1556d91c97512852b652e4a013e888e 512 Pfam PF02321 Outer membrane efflux protein 81 267 1.6E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS06390 e1556d91c97512852b652e4a013e888e 512 PANTHER PTHR30203 7 505 1.6E-101 T 22-04-2016 RMET_RS06390 e1556d91c97512852b652e4a013e888e 512 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 29 486 1.3E-87 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS06390 e1556d91c97512852b652e4a013e888e 512 SUPERFAMILY SSF56954 22 488 1.31E-96 T 22-04-2016 RMET_RS06390 e1556d91c97512852b652e4a013e888e 512 Gene3D G3DSA:1.20.1600.10 70 488 1.4E-100 T 22-04-2016 RMET_RS06390 e1556d91c97512852b652e4a013e888e 512 PANTHER PTHR30203:SF3 7 505 1.6E-101 T 22-04-2016 RMET_RS12000 72310165ebce6344c6e283ba8192c0b9 293 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 5 119 1.9E-16 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI RMET_RS12000 72310165ebce6344c6e283ba8192c0b9 293 Gene3D G3DSA:1.25.40.10 195 276 1.9E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS12000 72310165ebce6344c6e283ba8192c0b9 293 SUPERFAMILY SSF48452 141 261 5.31E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS12000 72310165ebce6344c6e283ba8192c0b9 293 Gene3D G3DSA:1.25.40.10 136 194 3.9E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RMET_RS07705 dd7381449b1d8662690c81727c1ce8a6 457 Gene3D G3DSA:3.40.50.1220 278 454 3.1E-79 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS07705 dd7381449b1d8662690c81727c1ce8a6 457 PANTHER PTHR10160 1 456 2.0E-198 T 22-04-2016 RMET_RS07705 dd7381449b1d8662690c81727c1ce8a6 457 PANTHER PTHR10160:SF24 1 456 2.0E-198 T 22-04-2016 RMET_RS07705 dd7381449b1d8662690c81727c1ce8a6 457 SUPERFAMILY SSF52467 280 453 2.7E-69 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RMET_RS07705 dd7381449b1d8662690c81727c1ce8a6 457 Pfam PF02233 NAD(P) transhydrogenase beta subunit 6 449 2.8E-164 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RMET_RS07705 dd7381449b1d8662690c81727c1ce8a6 457 PIRSF PIRSF000204 1 454 2.5E-150 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 PIRSF PIRSF002599 1 69 1.5E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 PRINTS PR00050 Cold shock protein signature 25 34 4.5E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 PRINTS PR00050 Cold shock protein signature 4 19 4.5E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 PRINTS PR00050 Cold shock protein signature 40 58 4.5E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 Gene3D G3DSA:2.40.50.140 1 65 8.1E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 SUPERFAMILY SSF50249 1 65 2.01E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.3E-30 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 SMART SM00357 3 67 1.1E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RMET_RS14505 0571a44be1e8f46d16e7c559644eecf9 69 PANTHER PTHR11544 1 65 2.3E-34 T 22-04-2016 RMET_RS01570 51a2f362cd00a4da02a3b355a6cc4bec 142 Pfam PF13467 Ribbon-helix-helix domain 16 86 1.8E-26 T 22-04-2016 IPR027373 Ribbon-helix-helix domain RMET_RS03925 830788c3f7b9668f09eb6d65ac108f02 235 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 75 2.6E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RMET_RS03925 830788c3f7b9668f09eb6d65ac108f02 235 Gene3D G3DSA:3.40.50.620 17 234 3.6E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS03925 830788c3f7b9668f09eb6d65ac108f02 235 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 20 232 5.7E-44 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RMET_RS03925 830788c3f7b9668f09eb6d65ac108f02 235 Pfam PF01467 Cytidylyltransferase-like 20 203 2.4E-24 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RMET_RS03925 830788c3f7b9668f09eb6d65ac108f02 235 PANTHER PTHR39321 13 235 2.8E-31 T 22-04-2016 RMET_RS03925 830788c3f7b9668f09eb6d65ac108f02 235 SUPERFAMILY SSF52374 15 232 4.56E-50 T 22-04-2016 RMET_RS03925 830788c3f7b9668f09eb6d65ac108f02 235 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 16 233 27.969 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RMET_RS16700 2da0c69b292162afbf665edbee882189 109 Pfam PF00034 Cytochrome c 40 105 6.4E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16700 2da0c69b292162afbf665edbee882189 109 PANTHER PTHR33751:SF3 34 109 5.4E-21 T 22-04-2016 RMET_RS16700 2da0c69b292162afbf665edbee882189 109 PANTHER PTHR33751 34 109 5.4E-21 T 22-04-2016 RMET_RS16700 2da0c69b292162afbf665edbee882189 109 SUPERFAMILY SSF46626 31 103 3.67E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16700 2da0c69b292162afbf665edbee882189 109 Gene3D G3DSA:1.10.760.10 37 106 1.7E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS00870 a201fed860a04f6b4393eb6a082f89c9 115 PANTHER PTHR37309 1 110 1.2E-29 T 22-04-2016 RMET_RS00870 a201fed860a04f6b4393eb6a082f89c9 115 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 5.6E-31 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV RMET_RS00870 a201fed860a04f6b4393eb6a082f89c9 115 PANTHER PTHR37309:SF1 1 110 1.2E-29 T 22-04-2016 RMET_RS04045 261ba2845fe905d6f2a38ff555848317 257 PANTHER PTHR10672 17 249 5.3E-93 T 22-04-2016 RMET_RS04045 261ba2845fe905d6f2a38ff555848317 257 SUPERFAMILY SSF53639 18 214 1.0E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS04045 261ba2845fe905d6f2a38ff555848317 257 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 27 206 1.6E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS04045 261ba2845fe905d6f2a38ff555848317 257 Gene3D G3DSA:3.40.225.10 21 228 2.3E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS04045 261ba2845fe905d6f2a38ff555848317 257 SMART SM01007 26 206 1.4E-61 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RMET_RS18120 3dd8517cc1092da50c8933788ceb75dd 188 Pfam PF12869 tRNA_anti-like 1 181 1.3E-35 T 22-04-2016 IPR024422 Protein of unknown function, OB-fold-containing RMET_RS15820 ea2a6a4b6f6dfefd6b52994fb9746d8d 341 Pfam PF11199 Protein of unknown function (DUF2891) 13 334 1.2E-122 T 22-04-2016 IPR021365 Protein of unknown function DUF2891 RMET_RS02490 926d9c3370811f8e661109a357cb1a0a 64 Pfam PF10276 Zinc-finger domain 19 52 2.6E-9 T 22-04-2016 IPR019401 Zinc finger, CHCC-type RMET_RS02490 926d9c3370811f8e661109a357cb1a0a 64 Gene3D G3DSA:2.60.260.40 3 61 4.6E-20 T 22-04-2016 IPR019401 Zinc finger, CHCC-type RMET_RS15965 5e98a4ffcfd0b5535b9ad5428911e7b8 95 Gene3D G3DSA:3.30.70.100 7 89 1.9E-26 T 22-04-2016 RMET_RS15965 5e98a4ffcfd0b5535b9ad5428911e7b8 95 SUPERFAMILY SSF54975 3 91 2.62E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RMET_RS15965 5e98a4ffcfd0b5535b9ad5428911e7b8 95 PANTHER PTHR10029 13 78 2.9E-21 T 22-04-2016 RMET_RS15965 5e98a4ffcfd0b5535b9ad5428911e7b8 95 Pfam PF00708 Acylphosphatase 5 89 1.1E-23 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RMET_RS00360 b71e8cd47ed1515a244e3ec97b028164 215 SUPERFAMILY SSF159594 31 196 2.38E-34 T 22-04-2016 RMET_RS00360 b71e8cd47ed1515a244e3ec97b028164 215 Gene3D G3DSA:3.40.50.10610 21 195 2.0E-41 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RMET_RS00360 b71e8cd47ed1515a244e3ec97b028164 215 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 39 188 3.6E-12 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 Pfam PF00033 Cytochrome b/b6/petB 32 226 1.5E-63 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 Gene3D G3DSA:1.20.810.10 14 321 8.3E-155 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 Gene3D G3DSA:1.20.810.10 368 456 8.3E-155 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 PANTHER PTHR19271 367 462 7.3E-222 T 22-04-2016 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 PANTHER PTHR19271 9 320 7.3E-222 T 22-04-2016 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 292 440 8.0E-40 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 SUPERFAMILY SSF81648 295 317 4.49E-23 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 SUPERFAMILY SSF81648 364 452 4.49E-23 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 SUPERFAMILY SSF81342 21 294 4.71E-94 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 PIRSF PIRSF038885 4 466 2.8E-148 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 PANTHER PTHR19271:SF9 367 462 7.3E-222 T 22-04-2016 RMET_RS16195 b22fd0918fe6925474c1cbc187121903 467 PANTHER PTHR19271:SF9 9 320 7.3E-222 T 22-04-2016 RMET_RS07475 ca9aba4df02b737ea1c80e6a95dd3f8d 93 Pfam PF12728 Helix-turn-helix domain 22 72 2.2E-9 T 22-04-2016 RMET_RS07475 ca9aba4df02b737ea1c80e6a95dd3f8d 93 Gene3D G3DSA:1.10.10.10 21 76 6.8E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS07475 ca9aba4df02b737ea1c80e6a95dd3f8d 93 SUPERFAMILY SSF46955 21 78 7.32E-9 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS03440 d8df23bc326b723c7f412be100ca9453 215 PANTHER PTHR30506 12 214 9.9E-60 T 22-04-2016 RMET_RS03440 d8df23bc326b723c7f412be100ca9453 215 Pfam PF03458 UPF0126 domain 20 91 1.6E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RMET_RS03440 d8df23bc326b723c7f412be100ca9453 215 Pfam PF03458 UPF0126 domain 108 181 1.8E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 Pfam PF04542 Sigma-70 region 2 26 92 2.7E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 SUPERFAMILY SSF88946 8 112 5.23E-24 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 185 5.5E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 Pfam PF08281 Sigma-70, region 4 129 181 2.1E-15 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 SUPERFAMILY SSF88659 122 186 2.06E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 PANTHER PTHR30173:SF31 11 186 2.0E-44 T 22-04-2016 RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 Gene3D G3DSA:1.10.1740.10 11 114 5.1E-24 T 22-04-2016 RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 Gene3D G3DSA:1.10.10.10 125 186 4.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS08290 2597219697ea4c1a51ee77bb52f2d63a 189 PANTHER PTHR30173 11 186 2.0E-44 T 22-04-2016 RMET_RS16930 7fdc59230bffded4fb2fdd79a049cd01 95 Pfam PF06243 Phenylacetic acid degradation B 5 92 1.1E-40 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 RMET_RS16930 7fdc59230bffded4fb2fdd79a049cd01 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 5.1E-45 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 RMET_RS16930 7fdc59230bffded4fb2fdd79a049cd01 95 PIRSF PIRSF030200 1 95 2.4E-45 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 RMET_RS00570 1bd9397b40a753c1af3bff1a94af5b9a 141 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 10 136 26.984 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 RMET_RS00570 1bd9397b40a753c1af3bff1a94af5b9a 141 SUPERFAMILY SSF54427 33 136 1.18E-33 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS00570 1bd9397b40a753c1af3bff1a94af5b9a 141 Gene3D G3DSA:3.10.450.50 13 137 9.7E-41 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS20240 f31bc1767b7bb3d8da4dc3af3b82e134 106 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 3 12 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 RMET_RS15800 1fa311653b8332318212ffbc0c8919b2 309 SUPERFAMILY SSF161098 101 290 5.63E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15800 1fa311653b8332318212ffbc0c8919b2 309 PANTHER PTHR30465 19 308 6.0E-109 T 22-04-2016 RMET_RS15800 1fa311653b8332318212ffbc0c8919b2 309 PANTHER PTHR30465:SF67 19 308 6.0E-109 T 22-04-2016 RMET_RS15800 1fa311653b8332318212ffbc0c8919b2 309 Gene3D G3DSA:1.10.3720.10 97 304 2.5E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS15800 1fa311653b8332318212ffbc0c8919b2 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 67 7.0E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RMET_RS15800 1fa311653b8332318212ffbc0c8919b2 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 306 5.9E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS08585 1eeca0a7ac414e307b55fd6f4cbe00d4 149 Pfam PF07885 Ion channel 65 132 1.2E-10 T 22-04-2016 IPR013099 Potassium channel domain RMET_RS08585 1eeca0a7ac414e307b55fd6f4cbe00d4 149 SUPERFAMILY SSF81324 28 132 3.01E-14 T 22-04-2016 RMET_RS08585 1eeca0a7ac414e307b55fd6f4cbe00d4 149 Gene3D G3DSA:1.10.287.70 12 131 2.7E-9 T 22-04-2016 RMET_RS17915 286aefea71e230178180905ac65028ad 391 PANTHER PTHR34700 43 391 6.0E-37 T 22-04-2016 RMET_RS17915 286aefea71e230178180905ac65028ad 391 Pfam PF01476 LysM domain 72 117 5.5E-10 T 22-04-2016 IPR018392 LysM domain RMET_RS17915 286aefea71e230178180905ac65028ad 391 SMART SM00257 71 120 0.0088 T 22-04-2016 IPR018392 LysM domain RMET_RS17915 286aefea71e230178180905ac65028ad 391 PANTHER PTHR34700:SF2 43 391 6.0E-37 T 22-04-2016 RMET_RS17915 286aefea71e230178180905ac65028ad 391 Gene3D G3DSA:3.10.350.10 71 119 5.3E-8 T 22-04-2016 IPR018392 LysM domain RMET_RS17915 286aefea71e230178180905ac65028ad 391 SUPERFAMILY SSF54106 71 119 4.05E-8 T 22-04-2016 IPR018392 LysM domain RMET_RS11080 617c7bae8282a13b4d9845e8e9440187 264 SUPERFAMILY SSF53335 79 223 6.79E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS11080 617c7bae8282a13b4d9845e8e9440187 264 PANTHER PTHR10108:SF836 89 179 4.9E-17 T 22-04-2016 RMET_RS11080 617c7bae8282a13b4d9845e8e9440187 264 PANTHER PTHR10108 89 179 4.9E-17 T 22-04-2016 RMET_RS11080 617c7bae8282a13b4d9845e8e9440187 264 Gene3D G3DSA:3.40.50.150 78 224 1.3E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS11080 617c7bae8282a13b4d9845e8e9440187 264 Pfam PF08241 Methyltransferase domain 82 131 1.6E-9 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RMET_RS05560 da6f2230dc1003add16b3030b7553835 99 Pfam PF12365 Protein of unknown function (DUF3649) 69 92 5.5E-6 T 22-04-2016 IPR022109 Protein of unknown function DUF3649 RMET_RS11375 303631acf95a97cdb9dcbdffdf4b8720 410 ProDom PD140121 POLYMERASE O-ANTIGEN TRANSMEMBRANE POLYSACCHARIDE WZY REPEAT MEMBRANE UNIT OLIGOSACCHARIDE CPS6AI 165 383 6.0E-103 T 22-04-2016 RMET_RS11375 303631acf95a97cdb9dcbdffdf4b8720 410 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 25 392 1.1E-62 T 22-04-2016 RMET_RS02475 99e7764df5d04b4ca03e45e91cc89291 345 SUPERFAMILY SSF53474 32 306 6.87E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS02475 99e7764df5d04b4ca03e45e91cc89291 345 Pfam PF00561 alpha/beta hydrolase fold 61 303 1.3E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS02475 99e7764df5d04b4ca03e45e91cc89291 345 Gene3D G3DSA:3.40.50.1820 42 177 6.8E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS02475 99e7764df5d04b4ca03e45e91cc89291 345 Gene3D G3DSA:3.40.50.1820 251 281 6.8E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS02475 99e7764df5d04b4ca03e45e91cc89291 345 PANTHER PTHR10794 10 336 6.2E-57 T 22-04-2016 RMET_RS02475 99e7764df5d04b4ca03e45e91cc89291 345 PIRSF PIRSF005211 1 345 1.6E-109 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- RMET_RS29245 ab5649793174f698cb428144163a8195 262 SUPERFAMILY SSF56801 1 262 9.29E-71 T 22-04-2016 RMET_RS29245 ab5649793174f698cb428144163a8195 262 PANTHER PTHR24095:SF178 1 262 1.6E-129 T 22-04-2016 RMET_RS29245 ab5649793174f698cb428144163a8195 262 Gene3D G3DSA:2.30.38.10 174 253 1.0E-8 T 22-04-2016 RMET_RS29245 ab5649793174f698cb428144163a8195 262 PANTHER PTHR24095 1 262 1.6E-129 T 22-04-2016 RMET_RS29245 ab5649793174f698cb428144163a8195 262 Gene3D G3DSA:3.40.50.980 1 158 2.7E-21 T 22-04-2016 RMET_RS29245 ab5649793174f698cb428144163a8195 262 Pfam PF00501 AMP-binding enzyme 1 259 1.7E-52 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 PANTHER PTHR11228 53 216 5.1E-25 T 22-04-2016 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 PANTHER PTHR11228 239 313 5.1E-25 T 22-04-2016 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 Gene3D G3DSA:3.20.20.70 49 318 1.0E-33 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 PIRSF PIRSF037420 36 320 2.0E-51 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 Pfam PF04055 Radical SAM superfamily 46 181 1.5E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 PANTHER PTHR11228:SF32 53 216 5.1E-25 T 22-04-2016 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 PANTHER PTHR11228:SF32 239 313 5.1E-25 T 22-04-2016 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 SUPERFAMILY SSF102114 47 216 2.55E-29 T 22-04-2016 RMET_RS10420 7c58b06191f5fd1385a5940709466bf4 321 SUPERFAMILY SSF102114 269 313 2.55E-29 T 22-04-2016 RMET_RS16515 ee21569f6794c41693d58334c2835fbc 133 PANTHER PTHR11759 15 133 2.3E-70 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RMET_RS16515 ee21569f6794c41693d58334c2835fbc 133 Pfam PF00411 Ribosomal protein S11 23 132 1.7E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RMET_RS16515 ee21569f6794c41693d58334c2835fbc 133 Gene3D G3DSA:3.30.420.80 10 133 1.0E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RMET_RS16515 ee21569f6794c41693d58334c2835fbc 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 133 33.146 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RMET_RS16515 ee21569f6794c41693d58334c2835fbc 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 7.0E-56 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16515 ee21569f6794c41693d58334c2835fbc 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site RMET_RS16515 ee21569f6794c41693d58334c2835fbc 133 SUPERFAMILY SSF53137 18 133 6.21E-48 T 22-04-2016 RMET_RS16515 ee21569f6794c41693d58334c2835fbc 133 PIRSF PIRSF002131 2 133 2.3E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RMET_RS00955 66ce477313498d5fa22e959de9a5ef41 222 Pfam PF12019 Type II transport protein GspH 84 209 2.4E-21 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RMET_RS00955 66ce477313498d5fa22e959de9a5ef41 222 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 47 67 5.4E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS00955 66ce477313498d5fa22e959de9a5ef41 222 SUPERFAMILY SSF54523 50 167 4.24E-21 T 22-04-2016 RMET_RS00955 66ce477313498d5fa22e959de9a5ef41 222 Gene3D G3DSA:3.30.700.10 50 114 3.3E-7 T 22-04-2016 RMET_RS00955 66ce477313498d5fa22e959de9a5ef41 222 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 47 67 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 PRINTS PR01438 Universal stress protein signature 249 261 2.6E-12 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 PRINTS PR01438 Universal stress protein signature 155 173 2.6E-12 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 PRINTS PR01438 Universal stress protein signature 267 289 2.6E-12 T 22-04-2016 IPR006015 Universal stress protein A RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 SUPERFAMILY SSF52402 12 149 7.44E-20 T 22-04-2016 RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 Gene3D G3DSA:3.40.50.620 147 291 3.3E-29 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 Gene3D G3DSA:3.40.50.620 12 146 5.3E-19 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 SUPERFAMILY SSF52402 155 291 3.51E-26 T 22-04-2016 RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 Pfam PF00582 Universal stress protein family 14 148 5.6E-18 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 Pfam PF00582 Universal stress protein family 155 289 7.2E-21 T 22-04-2016 IPR006016 UspA GO:0006950 RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 PANTHER PTHR31964 14 88 2.6E-14 T 22-04-2016 RMET_RS11105 2220b6ffbcbe726145a7ce9a595671c6 295 PANTHER PTHR31964 233 291 2.6E-14 T 22-04-2016 RMET_RS14805 796de7ed0346578193ec83106872a5d9 196 Gene3D G3DSA:2.40.128.110 26 194 1.0E-46 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS14805 796de7ed0346578193ec83106872a5d9 196 SMART SM00867 28 193 1.6E-58 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS14805 796de7ed0346578193ec83106872a5d9 196 Pfam PF04264 YceI-like domain 29 192 5.3E-33 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS14805 796de7ed0346578193ec83106872a5d9 196 PANTHER PTHR34406:SF1 8 196 5.2E-34 T 22-04-2016 RMET_RS14805 796de7ed0346578193ec83106872a5d9 196 PANTHER PTHR34406 8 196 5.2E-34 T 22-04-2016 RMET_RS14805 796de7ed0346578193ec83106872a5d9 196 SUPERFAMILY SSF101874 26 195 1.31E-45 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RMET_RS00045 a26bd0240ad349f782de606a37bbc3aa 309 SUPERFAMILY SSF103481 40 143 1.96E-15 T 22-04-2016 RMET_RS00045 a26bd0240ad349f782de606a37bbc3aa 309 SUPERFAMILY SSF103481 192 288 1.09E-11 T 22-04-2016 RMET_RS00045 a26bd0240ad349f782de606a37bbc3aa 309 PANTHER PTHR12715 1 283 5.3E-47 T 22-04-2016 RMET_RS00045 a26bd0240ad349f782de606a37bbc3aa 309 Pfam PF00892 EamA-like transporter family 7 140 2.2E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS00045 a26bd0240ad349f782de606a37bbc3aa 309 Pfam PF00892 EamA-like transporter family 152 285 5.1E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS03155 f6bf8fc986a98d23902c78466303c940 171 PANTHER PTHR35850:SF2 1 170 4.2E-71 T 22-04-2016 RMET_RS03155 f6bf8fc986a98d23902c78466303c940 171 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 1.5E-54 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RMET_RS03155 f6bf8fc986a98d23902c78466303c940 171 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 158 7.5E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RMET_RS03155 f6bf8fc986a98d23902c78466303c940 171 PANTHER PTHR35850 1 170 4.2E-71 T 22-04-2016 RMET_RS03155 f6bf8fc986a98d23902c78466303c940 171 PIRSF PIRSF028301 1 170 4.5E-55 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RMET_RS15245 cc48b810b1a3886e79fe47de66129d06 300 PIRSF PIRSF015558 10 300 6.2E-100 T 22-04-2016 IPR016634 Transcription regulator, DeoR type, predicted RMET_RS15245 cc48b810b1a3886e79fe47de66129d06 300 Pfam PF13280 WYL domain 135 207 9.3E-8 T 22-04-2016 IPR026881 WYL domain RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 PANTHER PTHR30136:SF7 1 259 3.2E-62 T 22-04-2016 RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 Pfam PF01614 Bacterial transcriptional regulator 131 251 1.6E-31 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 Gene3D G3DSA:1.10.10.10 12 82 1.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 SMART SM00346 13 102 1.3E-22 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 SUPERFAMILY SSF46785 13 84 3.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 PANTHER PTHR30136 1 259 3.2E-62 T 22-04-2016 RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 SUPERFAMILY SSF55781 70 256 2.75E-44 T 22-04-2016 IPR029016 GAF domain-like RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 Gene3D G3DSA:3.30.450.40 83 258 1.8E-50 T 22-04-2016 IPR029016 GAF domain-like RMET_RS06080 b2745955fef5fe5268494c9ab92e5eb4 261 Pfam PF09339 IclR helix-turn-helix domain 16 65 1.1E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 Gene3D G3DSA:3.40.50.2000 3 194 2.0E-70 T 22-04-2016 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 PANTHER PTHR21015 6 356 1.5E-114 T 22-04-2016 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 353 36.463 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 143 2.4E-37 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 334 1.5E-37 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 Gene3D G3DSA:3.40.50.2000 259 333 1.9E-5 T 22-04-2016 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 SUPERFAMILY SSF53756 5 354 7.63E-124 T 22-04-2016 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 Gene3D G3DSA:3.40.50.720 226 258 2.1E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 PANTHER PTHR21015:SF22 6 356 1.5E-114 T 22-04-2016 RMET_RS15665 7823f5876c57f5023d575b5e51d7e6be 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 348 3.5E-106 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RMET_RS10960 48f02a80cbdf75da944dc379779e11ee 300 Gene3D G3DSA:1.10.3720.10 86 300 8.9E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10960 48f02a80cbdf75da944dc379779e11ee 300 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 38 299 3.3E-81 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RMET_RS10960 48f02a80cbdf75da944dc379779e11ee 300 PANTHER PTHR30425 17 300 3.8E-119 T 22-04-2016 RMET_RS10960 48f02a80cbdf75da944dc379779e11ee 300 PANTHER PTHR30425:SF0 17 300 3.8E-119 T 22-04-2016 RMET_RS10960 48f02a80cbdf75da944dc379779e11ee 300 SUPERFAMILY SSF161098 46 294 4.71E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS10960 48f02a80cbdf75da944dc379779e11ee 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 297 4.3E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS06245 863e74170e5ade2d3059841be0433545 358 PANTHER PTHR30547:SF5 6 345 1.8E-130 T 22-04-2016 RMET_RS06245 863e74170e5ade2d3059841be0433545 358 Pfam PF06250 Protein of unknown function (DUF1016) 23 339 7.0E-109 T 22-04-2016 IPR009362 Protein of unknown function DUF1016 RMET_RS06245 863e74170e5ade2d3059841be0433545 358 PANTHER PTHR30547 6 345 1.8E-130 T 22-04-2016 RMET_RS09230 a29aeff17fb7550b3300ab7113430574 173 Pfam PF01661 Macro domain 22 138 7.5E-44 T 22-04-2016 IPR002589 Macro domain RMET_RS09230 a29aeff17fb7550b3300ab7113430574 173 PANTHER PTHR11106 11 173 3.8E-79 T 22-04-2016 RMET_RS09230 a29aeff17fb7550b3300ab7113430574 173 SMART SM00506 5 138 1.2E-56 T 22-04-2016 IPR002589 Macro domain RMET_RS09230 a29aeff17fb7550b3300ab7113430574 173 SUPERFAMILY SSF52949 4 172 1.11E-63 T 22-04-2016 RMET_RS09230 a29aeff17fb7550b3300ab7113430574 173 Gene3D G3DSA:3.40.220.10 5 172 1.5E-68 T 22-04-2016 RMET_RS10345 39d80b69b186a6e9dec00d6b8cd38df1 328 PANTHER PTHR13833 57 235 1.1E-20 T 22-04-2016 RMET_RS10345 39d80b69b186a6e9dec00d6b8cd38df1 328 PANTHER PTHR13833 279 320 1.1E-20 T 22-04-2016 RMET_RS10345 39d80b69b186a6e9dec00d6b8cd38df1 328 SUPERFAMILY SSF50974 10 321 1.62E-74 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RMET_RS10345 39d80b69b186a6e9dec00d6b8cd38df1 328 Pfam PF10282 Lactonase, 7-bladed beta-propeller 58 223 6.0E-8 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RMET_RS10345 39d80b69b186a6e9dec00d6b8cd38df1 328 Gene3D G3DSA:2.130.10.10 26 321 4.7E-54 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RMET_RS17580 88422cb0038a6840d58e083c9305dddb 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.5E-29 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RMET_RS17580 88422cb0038a6840d58e083c9305dddb 156 PANTHER PTHR33445 1 156 5.2E-38 T 22-04-2016 RMET_RS17580 88422cb0038a6840d58e083c9305dddb 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.347 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RMET_RS17580 88422cb0038a6840d58e083c9305dddb 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.0E-40 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 RMET_RS17580 88422cb0038a6840d58e083c9305dddb 156 Gene3D G3DSA:1.20.5.620 63 121 9.2E-12 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RMET_RS17580 88422cb0038a6840d58e083c9305dddb 156 SUPERFAMILY SSF81573 63 121 3.79E-11 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RMET_RS15700 fe2c1a1f855e461ced631e8cd436726a 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 15.205 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RMET_RS15700 fe2c1a1f855e461ced631e8cd436726a 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 83 8.3E-27 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RMET_RS15700 fe2c1a1f855e461ced631e8cd436726a 105 Pfam PF04999 Cell division protein FtsL 2 75 3.5E-17 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RMET_RS18250 997fe29412c11831095a65fc6604c022 92 SUPERFAMILY SSF103473 2 90 1.31E-9 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS18250 997fe29412c11831095a65fc6604c022 92 Gene3D G3DSA:1.20.1250.20 8 89 1.5E-7 T 22-04-2016 RMET_RS11290 dad67f33923ee220f258d3d9c3f02cca 282 SUPERFAMILY SSF56752 5 276 6.8E-81 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS11290 dad67f33923ee220f258d3d9c3f02cca 282 Gene3D G3DSA:3.30.470.10 5 120 3.4E-40 T 22-04-2016 RMET_RS11290 dad67f33923ee220f258d3d9c3f02cca 282 PANTHER PTHR11825:SF38 5 276 1.1E-91 T 22-04-2016 RMET_RS11290 dad67f33923ee220f258d3d9c3f02cca 282 PANTHER PTHR11825 5 276 1.1E-91 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS11290 dad67f33923ee220f258d3d9c3f02cca 282 Pfam PF01063 Amino-transferase class IV 32 253 3.9E-44 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RMET_RS11290 dad67f33923ee220f258d3d9c3f02cca 282 Gene3D G3DSA:3.20.10.10 123 277 6.0E-43 T 22-04-2016 RMET_RS08935 d1a33590cf095bc371a7fcaef95af321 515 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 34 262 1.0E-69 T 22-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 RMET_RS08935 d1a33590cf095bc371a7fcaef95af321 515 Gene3D G3DSA:1.10.620.20 15 503 4.6E-203 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS08935 d1a33590cf095bc371a7fcaef95af321 515 SUPERFAMILY SSF47240 18 511 4.4E-166 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS08935 d1a33590cf095bc371a7fcaef95af321 515 Pfam PF04945 YHS domain 420 462 1.8E-14 T 22-04-2016 IPR007029 YHS domain RMET_RS16190 2fe272d48304b487843903874d31cf45 247 Pfam PF02167 Cytochrome C1 family 33 245 5.3E-22 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RMET_RS16190 2fe272d48304b487843903874d31cf45 247 Gene3D G3DSA:1.10.760.10 21 212 1.3E-67 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS16190 2fe272d48304b487843903874d31cf45 247 PANTHER PTHR10266:SF3 7 164 2.6E-45 T 22-04-2016 RMET_RS16190 2fe272d48304b487843903874d31cf45 247 PANTHER PTHR10266:SF3 194 246 2.6E-45 T 22-04-2016 RMET_RS16190 2fe272d48304b487843903874d31cf45 247 Gene3D G3DSA:1.20.5.100 216 247 1.3E-7 T 22-04-2016 RMET_RS16190 2fe272d48304b487843903874d31cf45 247 PANTHER PTHR10266 7 164 2.6E-45 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RMET_RS16190 2fe272d48304b487843903874d31cf45 247 PANTHER PTHR10266 194 246 2.6E-45 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RMET_RS16190 2fe272d48304b487843903874d31cf45 247 SUPERFAMILY SSF46626 19 211 3.16E-54 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS30225 d1c4ca7b3a552becf2668c9410491041 87 SUPERFAMILY SSF51735 43 86 1.3E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS30225 d1c4ca7b3a552becf2668c9410491041 87 Gene3D G3DSA:3.40.50.720 44 87 8.9E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS30225 d1c4ca7b3a552becf2668c9410491041 87 Pfam PF00106 short chain dehydrogenase 48 85 3.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RMET_RS23735 cc676473e506113767170ccc81750596 116 PANTHER PTHR30213 2 116 3.0E-27 T 22-04-2016 RMET_RS23735 cc676473e506113767170ccc81750596 116 Pfam PF03631 Virulence factor BrkB 2 115 2.5E-22 T 22-04-2016 IPR017039 Virulence factor BrkB RMET_RS23735 cc676473e506113767170ccc81750596 116 PANTHER PTHR30213:SF0 2 116 3.0E-27 T 22-04-2016 RMET_RS23735 cc676473e506113767170ccc81750596 116 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 2 113 6.8E-29 T 22-04-2016 IPR017039 Virulence factor BrkB RMET_RS04275 78f93bd8c98811142f356cdcd9760b30 204 SUPERFAMILY SSF52972 1 196 2.2E-70 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RMET_RS04275 78f93bd8c98811142f356cdcd9760b30 204 PANTHER PTHR11067:SF9 1 203 1.2E-74 T 22-04-2016 RMET_RS04275 78f93bd8c98811142f356cdcd9760b30 204 Gene3D G3DSA:3.90.950.10 1 196 7.1E-75 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RMET_RS04275 78f93bd8c98811142f356cdcd9760b30 204 Pfam PF01725 Ham1 family 4 193 7.7E-54 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RMET_RS04275 78f93bd8c98811142f356cdcd9760b30 204 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 195 1.1E-53 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RMET_RS04275 78f93bd8c98811142f356cdcd9760b30 204 PANTHER PTHR11067 1 203 1.2E-74 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RMET_RS04275 78f93bd8c98811142f356cdcd9760b30 204 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 197 48.464 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RMET_RS14950 af568898532fdad313e27105d5a5f662 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 129 3.2E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RMET_RS14950 af568898532fdad313e27105d5a5f662 144 PANTHER PTHR34109 12 144 1.0E-23 T 22-04-2016 RMET_RS14950 af568898532fdad313e27105d5a5f662 144 SUPERFAMILY SSF54593 7 132 4.16E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS14950 af568898532fdad313e27105d5a5f662 144 Gene3D G3DSA:3.10.180.10 12 137 3.7E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RMET_RS14015 3276b5b007ed0a32347c4fa02c58a5a6 159 Gene3D G3DSA:3.10.590.10 10 157 1.8E-29 T 22-04-2016 IPR002740 EVE domain RMET_RS14015 3276b5b007ed0a32347c4fa02c58a5a6 159 Pfam PF01878 EVE domain 10 155 4.1E-55 T 22-04-2016 IPR002740 EVE domain RMET_RS14015 3276b5b007ed0a32347c4fa02c58a5a6 159 PANTHER PTHR14087 7 153 5.8E-77 T 22-04-2016 RMET_RS14015 3276b5b007ed0a32347c4fa02c58a5a6 159 SUPERFAMILY SSF88697 8 155 1.57E-60 T 22-04-2016 IPR015947 PUA-like domain RMET_RS27610 ef91050bef967b32037add4ae76e2db8 152 SMART SM00487 1 151 2.4E-5 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS27610 ef91050bef967b32037add4ae76e2db8 152 Gene3D G3DSA:3.40.50.300 1 147 1.3E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS27610 ef91050bef967b32037add4ae76e2db8 152 PANTHER PTHR14025:SF21 1 152 4.0E-87 T 22-04-2016 RMET_RS27610 ef91050bef967b32037add4ae76e2db8 152 PANTHER PTHR14025 1 152 4.0E-87 T 22-04-2016 RMET_RS27610 ef91050bef967b32037add4ae76e2db8 152 SUPERFAMILY SSF52540 1 144 4.73E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS27610 ef91050bef967b32037add4ae76e2db8 152 Pfam PF00270 DEAD/DEAH box helicase 12 123 3.3E-13 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RMET_RS00175 6899a27778e57b9ad42a568c73b8e5be 111 Gene3D G3DSA:2.40.160.10 21 97 3.9E-27 T 22-04-2016 IPR023614 Porin domain RMET_RS00175 6899a27778e57b9ad42a568c73b8e5be 111 SUPERFAMILY SSF56935 21 97 2.08E-24 T 22-04-2016 RMET_RS00175 6899a27778e57b9ad42a568c73b8e5be 111 Pfam PF13609 Gram-negative porin 9 87 1.9E-15 T 22-04-2016 RMET_RS17990 0c610a659bfb3896cd67af32ccfc52ed 407 PANTHER PTHR30469:SF0 17 405 1.0E-102 T 22-04-2016 RMET_RS17990 0c610a659bfb3896cd67af32ccfc52ed 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 66 392 5.1E-71 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS17990 0c610a659bfb3896cd67af32ccfc52ed 407 Gene3D G3DSA:2.40.50.100 90 124 5.5E-17 T 22-04-2016 RMET_RS17990 0c610a659bfb3896cd67af32ccfc52ed 407 Gene3D G3DSA:2.40.50.100 199 232 5.5E-17 T 22-04-2016 RMET_RS17990 0c610a659bfb3896cd67af32ccfc52ed 407 SUPERFAMILY SSF111369 79 315 2.62E-61 T 22-04-2016 RMET_RS17990 0c610a659bfb3896cd67af32ccfc52ed 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 89 312 6.5E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS17990 0c610a659bfb3896cd67af32ccfc52ed 407 PANTHER PTHR30469 17 405 1.0E-102 T 22-04-2016 RMET_RS10845 a684e182b5f3a36d9a021309a50edff9 483 SUPERFAMILY SSF53098 2 101 7.08E-74 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10845 a684e182b5f3a36d9a021309a50edff9 483 SUPERFAMILY SSF53098 131 483 7.08E-74 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10845 a684e182b5f3a36d9a021309a50edff9 483 Gene3D G3DSA:3.30.420.10 251 482 4.1E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS10845 a684e182b5f3a36d9a021309a50edff9 483 SMART SM00950 197 467 0.0028 T 22-04-2016 IPR003165 Piwi domain GO:0003676 RMET_RS12135 530d417b95fc86ea6442c9c1b54d5f3e 130 Pfam PF16137 Domain of unknown function (DUF4845) 44 126 5.7E-19 T 22-04-2016 IPR032314 Protein of unknown function DUF4845 RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 Pfam PF12848 ABC transporter 224 309 1.0E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 Gene3D G3DSA:3.40.50.300 2 270 3.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 Gene3D G3DSA:3.40.50.300 319 538 3.0E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 SMART SM00382 343 520 3.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 SMART SM00382 26 238 2.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 SUPERFAMILY SSF52540 296 534 1.03E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 SUPERFAMILY SSF52540 6 237 2.12E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 PANTHER PTHR19211 2 536 0.0 T 22-04-2016 RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 PANTHER PTHR19211:SF38 2 536 0.0 T 22-04-2016 RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 Pfam PF00005 ABC transporter 18 184 8.8E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS07925 4fdf8ab754d1760ad2839a8a64b9f2d8 540 Pfam PF00005 ABC transporter 335 475 4.5E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS03340 e3032b928cfa6eee4c1e2379c55aa518 262 PANTHER PTHR35152 9 243 3.2E-20 T 22-04-2016 RMET_RS03340 e3032b928cfa6eee4c1e2379c55aa518 262 Pfam PF03707 Bacterial signalling protein N terminal repeat 191 248 1.5E-7 T 22-04-2016 IPR005330 MHYT domain RMET_RS03340 e3032b928cfa6eee4c1e2379c55aa518 262 Pfam PF03707 Bacterial signalling protein N terminal repeat 64 112 2.1E-11 T 22-04-2016 IPR005330 MHYT domain RMET_RS03340 e3032b928cfa6eee4c1e2379c55aa518 262 Pfam PF03707 Bacterial signalling protein N terminal repeat 128 183 2.9E-16 T 22-04-2016 IPR005330 MHYT domain RMET_RS13070 ce8942cdb05e4ace5bb11ad39e760529 134 SUPERFAMILY SSF50249 14 113 6.0E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS13070 ce8942cdb05e4ace5bb11ad39e760529 134 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 51 111 4.1E-9 T 22-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 SMART SM00347 50 151 9.4E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 Gene3D G3DSA:1.10.10.10 24 165 1.5E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 PANTHER PTHR33164 1 164 3.0E-53 T 22-04-2016 RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 127 2.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 107 2.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 141 161 2.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 91 2.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 SUPERFAMILY SSF46785 27 164 8.03E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 PANTHER PTHR33164:SF3 1 164 3.0E-53 T 22-04-2016 RMET_RS15755 8a33b0f027e7fa1656c89be5418268f5 168 Pfam PF01047 MarR family 58 115 4.9E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RMET_RS09995 fedc6400d157e56dfd89646e56c3e044 279 PANTHER PTHR30629 4 238 3.6E-12 T 22-04-2016 RMET_RS09995 fedc6400d157e56dfd89646e56c3e044 279 Pfam PF13356 Domain of unknown function (DUF4102) 29 90 2.6E-11 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RMET_RS09995 fedc6400d157e56dfd89646e56c3e044 279 Gene3D G3DSA:1.10.150.130 136 205 3.2E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS09995 fedc6400d157e56dfd89646e56c3e044 279 PANTHER PTHR30629:SF2 4 238 3.6E-12 T 22-04-2016 RMET_RS09995 fedc6400d157e56dfd89646e56c3e044 279 SUPERFAMILY SSF56349 131 239 8.36E-11 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS17210 8d2828d45c1638e728e34d23cb665282 297 PANTHER PTHR32322 1 290 1.9E-85 T 22-04-2016 RMET_RS17210 8d2828d45c1638e728e34d23cb665282 297 SUPERFAMILY SSF103481 41 133 4.45E-11 T 22-04-2016 RMET_RS17210 8d2828d45c1638e728e34d23cb665282 297 Pfam PF00892 EamA-like transporter family 144 283 4.6E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS17210 8d2828d45c1638e728e34d23cb665282 297 Pfam PF00892 EamA-like transporter family 7 130 1.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RMET_RS17210 8d2828d45c1638e728e34d23cb665282 297 SUPERFAMILY SSF103481 186 287 7.59E-9 T 22-04-2016 RMET_RS17210 8d2828d45c1638e728e34d23cb665282 297 PANTHER PTHR32322:SF9 1 290 1.9E-85 T 22-04-2016 RMET_RS09525 1925ae41eba46f224cbc2ab466984514 246 SMART SM00530 10 64 1.3E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS09525 1925ae41eba46f224cbc2ab466984514 246 SUPERFAMILY SSF47413 5 64 1.53E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS09525 1925ae41eba46f224cbc2ab466984514 246 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 64 7.1E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS09525 1925ae41eba46f224cbc2ab466984514 246 Gene3D G3DSA:1.10.260.40 5 69 1.5E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS20765 8ae0b257bdbbf7ce9778a782e968a8c4 317 PANTHER PTHR30354:SF7 1 317 2.8E-134 T 22-04-2016 RMET_RS20765 8ae0b257bdbbf7ce9778a782e968a8c4 317 PANTHER PTHR30354 1 317 2.8E-134 T 22-04-2016 RMET_RS00790 32d8d2bfec882bcda78e15147a16ccd2 306 PANTHER PTHR30606 3 274 8.0E-40 T 22-04-2016 RMET_RS00790 32d8d2bfec882bcda78e15147a16ccd2 306 PANTHER PTHR30606:SF5 3 274 8.0E-40 T 22-04-2016 RMET_RS00790 32d8d2bfec882bcda78e15147a16ccd2 306 PIRSF PIRSF026649 1 283 1.9E-66 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RMET_RS00790 32d8d2bfec882bcda78e15147a16ccd2 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 274 2.3E-27 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RMET_RS06645 2b145caab5ea34ad00ecefd1941ddbb9 63 Gene3D G3DSA:3.30.429.20 2 60 2.5E-23 T 22-04-2016 RMET_RS06645 2b145caab5ea34ad00ecefd1941ddbb9 63 Pfam PF01361 Tautomerase enzyme 2 59 1.2E-17 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RMET_RS06645 2b145caab5ea34ad00ecefd1941ddbb9 63 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 1.6E-24 T 22-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 RMET_RS06645 2b145caab5ea34ad00ecefd1941ddbb9 63 SUPERFAMILY SSF55331 2 61 6.41E-18 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RMET_RS02385 7f8d56dc36575c091f14ad197d1c83fd 231 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 190 3.2E-68 T 22-04-2016 IPR022301 Integral membrane protein YjbE RMET_RS02385 7f8d56dc36575c091f14ad197d1c83fd 231 Pfam PF03741 Integral membrane protein TerC family 16 189 3.1E-45 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RMET_RS02385 7f8d56dc36575c091f14ad197d1c83fd 231 PANTHER PTHR30060 4 226 7.3E-36 T 22-04-2016 RMET_RS09300 b056a0a5a9d001b9f14d0561ecef05c1 237 PANTHER PTHR24220:SF568 7 237 1.4E-88 T 22-04-2016 RMET_RS09300 b056a0a5a9d001b9f14d0561ecef05c1 237 SMART SM00382 30 214 5.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS09300 b056a0a5a9d001b9f14d0561ecef05c1 237 Pfam PF00005 ABC transporter 21 165 6.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RMET_RS09300 b056a0a5a9d001b9f14d0561ecef05c1 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RMET_RS09300 b056a0a5a9d001b9f14d0561ecef05c1 237 PANTHER PTHR24220 7 237 1.4E-88 T 22-04-2016 RMET_RS09300 b056a0a5a9d001b9f14d0561ecef05c1 237 SUPERFAMILY SSF52540 4 232 2.77E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09300 b056a0a5a9d001b9f14d0561ecef05c1 237 Gene3D G3DSA:3.40.50.300 2 229 1.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS07100 ca266c1f2b9098dcd5167de495831c3d 306 PANTHER PTHR30465 1 305 2.5E-182 T 22-04-2016 RMET_RS07100 ca266c1f2b9098dcd5167de495831c3d 306 SUPERFAMILY SSF161098 91 288 3.01E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS07100 ca266c1f2b9098dcd5167de495831c3d 306 Gene3D G3DSA:1.10.3720.10 87 299 2.6E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS07100 ca266c1f2b9098dcd5167de495831c3d 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 9.9E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS07100 ca266c1f2b9098dcd5167de495831c3d 306 PANTHER PTHR30465:SF59 1 305 2.5E-182 T 22-04-2016 RMET_RS07720 7b309a190f52248ed43736c7823c9d10 71 SUPERFAMILY SSF56762 1 67 2.67E-7 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS13510 fe624b45e5f9b0ba2323ef8db9a103f5 282 Pfam PF00561 alpha/beta hydrolase fold 112 192 7.7E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS13510 fe624b45e5f9b0ba2323ef8db9a103f5 282 Gene3D G3DSA:3.40.50.1820 28 189 6.3E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS13510 fe624b45e5f9b0ba2323ef8db9a103f5 282 SUPERFAMILY SSF53474 21 209 8.25E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS12280 9dec0311196c353ff6374da26cd76ad1 228 SUPERFAMILY SSF100950 50 226 2.09E-41 T 22-04-2016 RMET_RS12280 9dec0311196c353ff6374da26cd76ad1 228 PANTHER PTHR32479:SF11 1 226 2.0E-47 T 22-04-2016 RMET_RS12280 9dec0311196c353ff6374da26cd76ad1 228 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 129 225 1.5E-28 T 22-04-2016 IPR003741 LUD domain RMET_RS12280 9dec0311196c353ff6374da26cd76ad1 228 Gene3D G3DSA:3.40.50.10420 51 226 7.4E-45 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RMET_RS12280 9dec0311196c353ff6374da26cd76ad1 228 PANTHER PTHR32479 1 226 2.0E-47 T 22-04-2016 RMET_RS06835 b8725af63d9e29941a3ad456366fdb59 635 PANTHER PTHR36837:SF2 145 634 1.1E-187 T 22-04-2016 RMET_RS06835 b8725af63d9e29941a3ad456366fdb59 635 Gene3D G3DSA:3.40.50.1820 239 603 1.9E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06835 b8725af63d9e29941a3ad456366fdb59 635 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 144 310 2.2E-68 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- RMET_RS06835 b8725af63d9e29941a3ad456366fdb59 635 PANTHER PTHR36837 145 634 1.1E-187 T 22-04-2016 RMET_RS06835 b8725af63d9e29941a3ad456366fdb59 635 SUPERFAMILY SSF53474 279 565 1.42E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06835 b8725af63d9e29941a3ad456366fdb59 635 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 94 633 2.6E-227 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 RMET_RS30935 2fed01067a4864a5e1ef25b6122ba9f3 106 PANTHER PTHR30348:SF7 2 104 3.5E-35 T 22-04-2016 RMET_RS30935 2fed01067a4864a5e1ef25b6122ba9f3 106 Pfam PF01904 Protein of unknown function DUF72 2 105 3.1E-19 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS30935 2fed01067a4864a5e1ef25b6122ba9f3 106 SUPERFAMILY SSF117396 3 105 9.29E-22 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS30935 2fed01067a4864a5e1ef25b6122ba9f3 106 PANTHER PTHR30348 2 104 3.5E-35 T 22-04-2016 RMET_RS30935 2fed01067a4864a5e1ef25b6122ba9f3 106 Gene3D G3DSA:3.20.20.410 3 104 1.1E-22 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RMET_RS12745 d443a426f778ffa67bb0239c8244f58a 395 TIGRFAM TIGR00843 benE: benzoate transporter 6 387 5.0E-117 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RMET_RS12745 d443a426f778ffa67bb0239c8244f58a 395 PANTHER PTHR30199:SF0 10 395 5.1E-147 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RMET_RS12745 d443a426f778ffa67bb0239c8244f58a 395 PANTHER PTHR30199 10 395 5.1E-147 T 22-04-2016 RMET_RS12745 d443a426f778ffa67bb0239c8244f58a 395 Pfam PF03594 Benzoate membrane transport protein 10 385 2.6E-145 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RMET_RS10105 f0cd65be74a5d503c73f6d419faeba48 114 Gene3D G3DSA:1.10.10.10 36 95 4.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS10105 f0cd65be74a5d503c73f6d419faeba48 114 SUPERFAMILY SSF46785 36 96 5.2E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15525 6de94943287bc67cbc4143562a3cca97 241 Gene3D G3DSA:3.90.79.10 7 152 1.5E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS15525 6de94943287bc67cbc4143562a3cca97 241 PANTHER PTHR23114 1 155 7.4E-39 T 22-04-2016 RMET_RS15525 6de94943287bc67cbc4143562a3cca97 241 Pfam PF00293 NUDIX domain 7 136 3.5E-22 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RMET_RS15525 6de94943287bc67cbc4143562a3cca97 241 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.3E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RMET_RS15525 6de94943287bc67cbc4143562a3cca97 241 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.3E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RMET_RS15525 6de94943287bc67cbc4143562a3cca97 241 SUPERFAMILY SSF55811 6 158 2.03E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RMET_RS15525 6de94943287bc67cbc4143562a3cca97 241 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RMET_RS15525 6de94943287bc67cbc4143562a3cca97 241 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.018 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH RMET_RS13815 89ec566944762c319dec4462477eb071 574 PANTHER PTHR33362:SF7 447 520 3.4E-235 T 22-04-2016 RMET_RS13815 89ec566944762c319dec4462477eb071 574 PANTHER PTHR33362:SF7 5 288 3.4E-235 T 22-04-2016 RMET_RS13815 89ec566944762c319dec4462477eb071 574 PANTHER PTHR33362:SF7 328 429 3.4E-235 T 22-04-2016 RMET_RS13815 89ec566944762c319dec4462477eb071 574 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 513 1.6E-92 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RMET_RS13815 89ec566944762c319dec4462477eb071 574 PANTHER PTHR33362 447 520 3.4E-235 T 22-04-2016 RMET_RS13815 89ec566944762c319dec4462477eb071 574 PANTHER PTHR33362 5 288 3.4E-235 T 22-04-2016 RMET_RS13815 89ec566944762c319dec4462477eb071 574 PANTHER PTHR33362 328 429 3.4E-235 T 22-04-2016 RMET_RS00725 c384c4b6c1191bbf908ee9a787dadfe4 216 PANTHER PTHR30055:SF58 19 214 1.9E-58 T 22-04-2016 RMET_RS00725 c384c4b6c1191bbf908ee9a787dadfe4 216 SUPERFAMILY SSF46689 27 98 7.48E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS00725 c384c4b6c1191bbf908ee9a787dadfe4 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 53 81 1.3E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS00725 c384c4b6c1191bbf908ee9a787dadfe4 216 Gene3D G3DSA:1.10.357.10 25 215 1.0E-43 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS00725 c384c4b6c1191bbf908ee9a787dadfe4 216 SUPERFAMILY SSF48498 105 215 1.44E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RMET_RS00725 c384c4b6c1191bbf908ee9a787dadfe4 216 PANTHER PTHR30055 19 214 1.9E-58 T 22-04-2016 RMET_RS11330 ee9467dd20abb78e70472a57242eaba8 520 Pfam PF11658 Cellulose biosynthesis protein BcsG 4 516 9.1E-203 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG RMET_RS11330 ee9467dd20abb78e70472a57242eaba8 520 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 2 518 5.4E-237 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG RMET_RS06300 5fde667aaf2c663d9d2479e0e8368fa4 116 Pfam PF11171 Protein of unknown function (DUF2958) 5 114 7.0E-43 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 RMET_RS12070 1f91bccc137c6103849f1fe47095a7f6 205 PANTHER PTHR30629:SF4 1 202 1.1E-81 T 22-04-2016 RMET_RS12070 1f91bccc137c6103849f1fe47095a7f6 205 Pfam PF13356 Domain of unknown function (DUF4102) 6 87 7.2E-19 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RMET_RS12070 1f91bccc137c6103849f1fe47095a7f6 205 PANTHER PTHR30629 1 202 1.1E-81 T 22-04-2016 RMET_RS12070 1f91bccc137c6103849f1fe47095a7f6 205 SUPERFAMILY SSF56349 99 199 1.53E-11 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS12070 1f91bccc137c6103849f1fe47095a7f6 205 Gene3D G3DSA:1.10.150.130 99 197 1.8E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RMET_RS12070 1f91bccc137c6103849f1fe47095a7f6 205 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 150 6.6E-5 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 Gene3D G3DSA:1.20.1250.20 271 458 1.7E-26 T 22-04-2016 RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 Gene3D G3DSA:1.20.1250.20 41 249 3.9E-30 T 22-04-2016 RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 PANTHER PTHR23508:SF11 41 452 3.4E-158 T 22-04-2016 RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 Pfam PF07690 Major Facilitator Superfamily 54 418 8.9E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 ProSitePatterns PS00217 Sugar transport proteins signature 2. 154 179 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 PANTHER PTHR23508 41 452 3.4E-158 T 22-04-2016 RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 SUPERFAMILY SSF103473 41 458 2.49E-74 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 ProSitePatterns PS00216 Sugar transport proteins signature 1. 104 120 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RMET_RS17095 b917f080fd67137b2c442e60523f9556 461 ProSitePatterns PS00216 Sugar transport proteins signature 1. 327 344 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RMET_RS04520 2d402a4fea7710ac717a0b88c3053a6b 198 Pfam PF13548 Domain of unknown function (DUF4126) 6 176 1.5E-59 T 22-04-2016 IPR025196 Domain of unknown function DUF4126 RMET_RS05995 bec98268bbf6ef3510e304fe4bc1dbab 603 SUPERFAMILY SSF52091 450 560 1.57E-11 T 22-04-2016 IPR002645 STAS domain RMET_RS05995 bec98268bbf6ef3510e304fe4bc1dbab 603 Pfam PF00916 Sulfate permease family 22 392 4.7E-86 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RMET_RS05995 bec98268bbf6ef3510e304fe4bc1dbab 603 PANTHER PTHR11814 7 585 1.4E-139 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 RMET_RS05995 bec98268bbf6ef3510e304fe4bc1dbab 603 PANTHER PTHR11814:SF71 7 585 1.4E-139 T 22-04-2016 RMET_RS05995 bec98268bbf6ef3510e304fe4bc1dbab 603 Pfam PF01740 STAS domain 455 557 1.2E-10 T 22-04-2016 IPR002645 STAS domain RMET_RS05995 bec98268bbf6ef3510e304fe4bc1dbab 603 Gene3D G3DSA:3.30.750.24 452 560 5.6E-11 T 22-04-2016 IPR002645 STAS domain RMET_RS06850 67c1c08e70ded0e0d5011088052eb962 183 Pfam PF05233 PHB accumulation regulatory domain 126 165 6.9E-18 T 22-04-2016 IPR007897 PHB accumulation regulatory RMET_RS06850 67c1c08e70ded0e0d5011088052eb962 183 Pfam PF05233 PHB accumulation regulatory domain 75 113 4.7E-19 T 22-04-2016 IPR007897 PHB accumulation regulatory RMET_RS06850 67c1c08e70ded0e0d5011088052eb962 183 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 115 1.8E-45 T 22-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RMET_RS06850 67c1c08e70ded0e0d5011088052eb962 183 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 11 70 6.0E-31 T 22-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RMET_RS16880 3897007e932d5321ab8d6d47174aa804 185 Gene3D G3DSA:1.10.10.10 119 183 9.6E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS16880 3897007e932d5321ab8d6d47174aa804 185 SUPERFAMILY SSF46785 118 180 1.88E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15720 d22ad5c681ac11c6a173aac080ff3e1d 69 Pfam PF13609 Gram-negative porin 7 66 2.4E-9 T 22-04-2016 RMET_RS15720 d22ad5c681ac11c6a173aac080ff3e1d 69 Gene3D G3DSA:2.40.160.10 18 67 4.2E-6 T 22-04-2016 IPR023614 Porin domain RMET_RS15720 d22ad5c681ac11c6a173aac080ff3e1d 69 SUPERFAMILY SSF56935 16 67 2.42E-6 T 22-04-2016 RMET_RS03580 4461cbed86d1baa4f1312fadcd5f81c6 217 Pfam PF00691 OmpA family 101 185 1.8E-19 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS03580 4461cbed86d1baa4f1312fadcd5f81c6 217 SUPERFAMILY SSF103088 90 210 2.88E-32 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS03580 4461cbed86d1baa4f1312fadcd5f81c6 217 PANTHER PTHR30128 74 216 1.1E-28 T 22-04-2016 RMET_RS03580 4461cbed86d1baa4f1312fadcd5f81c6 217 PRINTS PR01021 OMPA domain signature 147 163 2.0E-19 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS03580 4461cbed86d1baa4f1312fadcd5f81c6 217 PRINTS PR01021 OMPA domain signature 102 124 2.0E-19 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS03580 4461cbed86d1baa4f1312fadcd5f81c6 217 PRINTS PR01021 OMPA domain signature 132 147 2.0E-19 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RMET_RS03580 4461cbed86d1baa4f1312fadcd5f81c6 217 Gene3D G3DSA:3.30.1330.60 89 211 1.4E-36 T 22-04-2016 IPR006665 OmpA-like domain RMET_RS02935 69166e4caff5ebff4234d3f70a70ffbc 229 PANTHER PTHR30462 20 209 1.6E-30 T 22-04-2016 RMET_RS02935 69166e4caff5ebff4234d3f70a70ffbc 229 Pfam PF04403 Paraquat-inducible protein A 60 211 3.2E-47 T 22-04-2016 IPR007498 Paraquat-inducible protein A RMET_RS02935 69166e4caff5ebff4234d3f70a70ffbc 229 PANTHER PTHR30462:SF3 20 209 1.6E-30 T 22-04-2016 RMET_RS05750 c8aea5ae6e80159d25258c83fa2887ec 532 SUPERFAMILY SSF46626 30 170 5.02E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS05750 c8aea5ae6e80159d25258c83fa2887ec 532 SUPERFAMILY SSF46626 189 311 2.22E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS05750 c8aea5ae6e80159d25258c83fa2887ec 532 Gene3D G3DSA:1.10.760.10 206 302 3.4E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS05750 c8aea5ae6e80159d25258c83fa2887ec 532 PANTHER PTHR35008 5 308 1.8E-83 T 22-04-2016 RMET_RS05750 c8aea5ae6e80159d25258c83fa2887ec 532 Pfam PF00034 Cytochrome c 48 150 1.7E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS05750 c8aea5ae6e80159d25258c83fa2887ec 532 Gene3D G3DSA:1.10.760.10 191 205 6.7E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS05750 c8aea5ae6e80159d25258c83fa2887ec 532 Gene3D G3DSA:1.10.760.10 20 154 6.7E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RMET_RS05750 c8aea5ae6e80159d25258c83fa2887ec 532 PANTHER PTHR35008:SF2 5 308 1.8E-83 T 22-04-2016 RMET_RS09665 647cccc13edc8f6d0edd9d0f951cdb72 225 Pfam PF11010 Protein of unknown function (DUF2848) 24 216 8.3E-85 T 22-04-2016 IPR021269 Protein of unknown function DUF2848 RMET_RS09665 647cccc13edc8f6d0edd9d0f951cdb72 225 SUPERFAMILY SSF56529 36 205 9.62E-16 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS09665 647cccc13edc8f6d0edd9d0f951cdb72 225 Gene3D G3DSA:3.90.850.10 45 205 8.9E-6 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RMET_RS04935 824903fd65d8a09c7511a99cf1f3b499 290 Gene3D G3DSA:3.40.630.40 7 288 3.4E-92 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RMET_RS04935 824903fd65d8a09c7511a99cf1f3b499 290 SUPERFAMILY SSF53187 12 288 1.26E-82 T 22-04-2016 RMET_RS04935 824903fd65d8a09c7511a99cf1f3b499 290 Pfam PF05013 N-formylglutamate amidohydrolase 24 258 8.0E-64 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase RMET_RS17030 57ffa8b0dd629bd8746287e0a1b1be23 188 Gene3D G3DSA:3.30.1360.100 107 184 4.0E-14 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RMET_RS17030 57ffa8b0dd629bd8746287e0a1b1be23 188 Pfam PF04612 Type II secretion system (T2SS), protein M 26 182 3.4E-46 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 RMET_RS17030 57ffa8b0dd629bd8746287e0a1b1be23 188 SUPERFAMILY SSF103054 106 183 2.62E-16 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RMET_RS16915 031f7aee0ba4a747178d7b98e492b4b2 152 SUPERFAMILY SSF88697 6 115 2.98E-14 T 22-04-2016 IPR015947 PUA-like domain RMET_RS16915 031f7aee0ba4a747178d7b98e492b4b2 152 Gene3D G3DSA:2.30.130.30 7 112 1.7E-7 T 22-04-2016 RMET_RS15485 f7c3c67d360018090df6b65ecaa84e95 312 Pfam PF01578 Cytochrome C assembly protein 71 306 8.7E-23 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RMET_RS15485 f7c3c67d360018090df6b65ecaa84e95 312 PANTHER PTHR38034 45 309 8.7E-39 T 22-04-2016 RMET_RS03425 ca3f66198d7db1455d8b267342088bc1 400 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 18 396 9.7E-154 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition RMET_RS03425 ca3f66198d7db1455d8b267342088bc1 400 Gene3D G3DSA:3.40.630.30 195 347 7.4E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS03425 ca3f66198d7db1455d8b267342088bc1 400 PANTHER PTHR31384 51 330 1.2E-53 T 22-04-2016 RMET_RS03425 ca3f66198d7db1455d8b267342088bc1 400 SUPERFAMILY SSF55729 203 377 7.06E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS11820 e5e37c6e860d2db652b64bd28083b4ed 164 PANTHER PTHR30471 27 164 6.9E-63 T 22-04-2016 RMET_RS11820 e5e37c6e860d2db652b64bd28083b4ed 164 PANTHER PTHR30471:SF5 27 164 6.9E-63 T 22-04-2016 RMET_RS11820 e5e37c6e860d2db652b64bd28083b4ed 164 Gene3D G3DSA:3.40.140.10 42 164 2.8E-45 T 22-04-2016 RMET_RS11820 e5e37c6e860d2db652b64bd28083b4ed 164 SUPERFAMILY SSF102712 72 141 3.79E-5 T 22-04-2016 RMET_RS11820 e5e37c6e860d2db652b64bd28083b4ed 164 Pfam PF04002 RadC-like JAB domain 45 162 5.7E-39 T 22-04-2016 IPR025657 RadC-like JAB domain RMET_RS11820 e5e37c6e860d2db652b64bd28083b4ed 164 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 164 8.8E-40 T 22-04-2016 IPR001405 RadC protein RMET_RS12735 3263e37dbbf5f02335f8445f4af36196 190 Pfam PF11136 Protein of unknown function (DUF2889) 15 137 5.8E-39 T 22-04-2016 IPR021312 Protein of unknown function DUF2889 RMET_RS05230 76cfaf3a622611b1ca3198457d1a5fe4 416 Pfam PF02687 FtsX-like permease family 276 409 2.0E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RMET_RS05230 76cfaf3a622611b1ca3198457d1a5fe4 416 Pfam PF12704 MacB-like periplasmic core domain 30 244 2.5E-19 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RMET_RS05230 76cfaf3a622611b1ca3198457d1a5fe4 416 PANTHER PTHR30489 9 416 4.1E-100 T 22-04-2016 RMET_RS05230 76cfaf3a622611b1ca3198457d1a5fe4 416 PANTHER PTHR30489:SF8 9 416 4.1E-100 T 22-04-2016 RMET_RS05230 76cfaf3a622611b1ca3198457d1a5fe4 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 416 1.0E-146 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 RMET_RS08120 11b1fbf84470c101d70586236f84bad6 284 SUPERFAMILY SSF53850 2 282 1.41E-57 T 22-04-2016 RMET_RS08120 11b1fbf84470c101d70586236f84bad6 284 Gene3D G3DSA:3.10.105.10 52 246 1.6E-47 T 22-04-2016 RMET_RS08120 11b1fbf84470c101d70586236f84bad6 284 Gene3D G3DSA:3.40.190.10 2 51 6.8E-6 T 22-04-2016 RMET_RS08120 11b1fbf84470c101d70586236f84bad6 284 PANTHER PTHR30290 1 283 4.7E-52 T 22-04-2016 RMET_RS08120 11b1fbf84470c101d70586236f84bad6 284 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 37 184 1.1E-32 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RMET_RS08120 11b1fbf84470c101d70586236f84bad6 284 PANTHER PTHR30290:SF14 1 283 4.7E-52 T 22-04-2016 RMET_RS03445 f85446c052c45c182c71c60ba30338ab 224 Pfam PF01713 Smr domain 139 220 2.6E-25 T 22-04-2016 IPR002625 Smr domain RMET_RS03445 f85446c052c45c182c71c60ba30338ab 224 SMART SM00463 136 220 3.0E-12 T 22-04-2016 IPR002625 Smr domain RMET_RS03445 f85446c052c45c182c71c60ba30338ab 224 SUPERFAMILY SSF160443 137 220 6.54E-19 T 22-04-2016 IPR002625 Smr domain RMET_RS03445 f85446c052c45c182c71c60ba30338ab 224 PANTHER PTHR35562 36 220 8.3E-44 T 22-04-2016 RMET_RS02965 b98a500fc855c9cf6c4fb4f18205682d 199 SUPERFAMILY SSF46955 12 64 8.15E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS02965 b98a500fc855c9cf6c4fb4f18205682d 199 Pfam PF12728 Helix-turn-helix domain 12 62 2.7E-10 T 22-04-2016 RMET_RS02965 b98a500fc855c9cf6c4fb4f18205682d 199 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 12 60 1.5E-17 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RMET_RS12455 c2a9fcfdd26f2d3b01f50de9b72baf74 95 Pfam PF03937 Flavinator of succinate dehydrogenase 18 83 1.5E-19 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RMET_RS12455 c2a9fcfdd26f2d3b01f50de9b72baf74 95 SUPERFAMILY SSF109910 11 90 1.31E-19 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RMET_RS12455 c2a9fcfdd26f2d3b01f50de9b72baf74 95 Gene3D G3DSA:1.10.150.250 12 92 8.9E-23 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RMET_RS08645 c2bb4062c63d39a435e37d7fba593af2 616 PANTHER PTHR13943:SF48 145 588 2.4E-148 T 22-04-2016 RMET_RS08645 c2bb4062c63d39a435e37d7fba593af2 616 PANTHER PTHR13943:SF48 47 121 2.4E-148 T 22-04-2016 RMET_RS08645 c2bb4062c63d39a435e37d7fba593af2 616 Pfam PF07287 Protein of unknown function (DUF1446) 13 356 8.4E-113 T 22-04-2016 IPR010839 Protein of unknown function DUF1446 RMET_RS08645 c2bb4062c63d39a435e37d7fba593af2 616 PANTHER PTHR13943 145 588 2.4E-148 T 22-04-2016 RMET_RS08645 c2bb4062c63d39a435e37d7fba593af2 616 PANTHER PTHR13943 47 121 2.4E-148 T 22-04-2016 RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 Gene3D G3DSA:3.30.465.10 197 284 2.6E-27 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 SMART SM01091 207 285 7.0E-28 T 22-04-2016 IPR005170 Transporter-associated domain RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 SUPERFAMILY SSF54631 61 201 5.68E-31 T 22-04-2016 RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 Pfam PF03471 Transporter associated domain 210 284 2.2E-21 T 22-04-2016 IPR005170 Transporter-associated domain RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 Gene3D G3DSA:3.10.580.10 60 196 1.8E-19 T 22-04-2016 RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 Pfam PF00571 CBS domain 141 190 8.2E-5 T 22-04-2016 IPR000644 CBS domain RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 Pfam PF00571 CBS domain 96 128 0.0011 T 22-04-2016 IPR000644 CBS domain RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 PANTHER PTHR22777 33 295 2.0E-101 T 22-04-2016 RMET_RS02280 871d55e28a0364f72f4bb886b0ad4637 295 SUPERFAMILY SSF56176 205 287 9.0E-23 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RMET_RS11880 646edb4967c5f1afe178660e2317d1d8 123 Gene3D G3DSA:3.40.1260.10 8 117 1.1E-12 T 22-04-2016 IPR027396 DsrEFH-like RMET_RS11880 646edb4967c5f1afe178660e2317d1d8 123 Pfam PF02635 DsrE/DsrF-like family 20 113 8.5E-7 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein RMET_RS11880 646edb4967c5f1afe178660e2317d1d8 123 SUPERFAMILY SSF75169 7 116 1.16E-13 T 22-04-2016 IPR027396 DsrEFH-like RMET_RS02245 3f398f0917eb3ca84fb69f35540a3fcf 292 Pfam PF01863 Protein of unknown function DUF45 75 284 1.3E-59 T 22-04-2016 IPR002725 Protein of unknown function DUF45 RMET_RS02245 3f398f0917eb3ca84fb69f35540a3fcf 292 PANTHER PTHR30399 56 284 3.6E-46 T 22-04-2016 RMET_RS08525 a687516084a0278142149cc690e943c4 412 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 294 4.1E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RMET_RS08525 a687516084a0278142149cc690e943c4 412 SUPERFAMILY SSF111369 55 298 7.59E-66 T 22-04-2016 RMET_RS08525 a687516084a0278142149cc690e943c4 412 Gene3D G3DSA:2.40.50.100 65 99 3.2E-19 T 22-04-2016 RMET_RS08525 a687516084a0278142149cc690e943c4 412 Gene3D G3DSA:2.40.50.100 174 206 3.2E-19 T 22-04-2016 RMET_RS08525 a687516084a0278142149cc690e943c4 412 PANTHER PTHR30158 1 399 4.7E-118 T 22-04-2016 RMET_RS08525 a687516084a0278142149cc690e943c4 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 375 6.3E-84 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RMET_RS06800 2172fcf1857eeecbf2f04d56533130c8 330 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 104 311 2.2E-89 T 22-04-2016 IPR014142 P-type conjugative transfer protein TrbG RMET_RS06800 2172fcf1857eeecbf2f04d56533130c8 330 Pfam PF03524 Conjugal transfer protein 103 322 1.3E-64 T 22-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RMET_RS16030 bf6291169c232c96adc0f01643951ca3 337 Pfam PF09925 Predicted membrane protein (DUF2157) 16 155 2.0E-25 T 22-04-2016 IPR018677 Domain of unknown function DUF2157 RMET_RS01820 cf5772243126fda65a186dc15eb08529 348 Pfam PF13478 XdhC Rossmann domain 165 306 6.2E-38 T 22-04-2016 IPR027051 XdhC Rossmann domain RMET_RS01820 cf5772243126fda65a186dc15eb08529 348 Pfam PF02625 XdhC and CoxI family 15 77 2.4E-23 T 22-04-2016 IPR003777 XdhC- CoxI RMET_RS01820 cf5772243126fda65a186dc15eb08529 348 SUPERFAMILY SSF51735 160 227 9.35E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS01820 cf5772243126fda65a186dc15eb08529 348 PANTHER PTHR30388:SF4 5 311 4.6E-88 T 22-04-2016 RMET_RS01820 cf5772243126fda65a186dc15eb08529 348 PANTHER PTHR30388 5 311 4.6E-88 T 22-04-2016 RMET_RS01820 cf5772243126fda65a186dc15eb08529 348 Gene3D G3DSA:3.40.50.20 164 229 2.7E-6 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RMET_RS07390 b74dee58051972c033390ef764c56d38 129 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 48 98 6.6E-19 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RMET_RS07390 b74dee58051972c033390ef764c56d38 129 PANTHER PTHR36154 44 112 3.4E-12 T 22-04-2016 RMET_RS02990 6c5600e809a9980070935fcf81c5d477 133 Gene3D G3DSA:3.10.450.50 12 127 1.5E-10 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS02990 6c5600e809a9980070935fcf81c5d477 133 SUPERFAMILY SSF54427 13 125 1.9E-35 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS02990 6c5600e809a9980070935fcf81c5d477 133 Pfam PF12680 SnoaL-like domain 18 117 1.7E-13 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RMET_RS13915 f307bf13149e5a8e44d4a10964b04fee 63 Pfam PF11943 Protein of unknown function (DUF3460) 3 60 2.4E-28 T 22-04-2016 IPR021853 Protein of unknown function DUF3460 RMET_RS08470 ddb2eb4a738fe98440f37a91b6e45f74 105 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 4.6E-37 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RMET_RS08470 ddb2eb4a738fe98440f37a91b6e45f74 105 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 23.17 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RMET_RS08470 ddb2eb4a738fe98440f37a91b6e45f74 105 SUPERFAMILY SSF63592 1 97 1.18E-35 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RMET_RS08470 ddb2eb4a738fe98440f37a91b6e45f74 105 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 10 97 2.0E-44 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RMET_RS08995 9f8844c658016f03b086dad27e11f227 625 Pfam PF04632 Fusaric acid resistance protein family 9 270 3.1E-101 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 RMET_RS08995 9f8844c658016f03b086dad27e11f227 625 PANTHER PTHR30509 261 600 6.6E-91 T 22-04-2016 RMET_RS08995 9f8844c658016f03b086dad27e11f227 625 PANTHER PTHR30509 4 242 6.6E-91 T 22-04-2016 RMET_RS08995 9f8844c658016f03b086dad27e11f227 625 PANTHER PTHR30509:SF1 261 600 6.6E-91 T 22-04-2016 RMET_RS08995 9f8844c658016f03b086dad27e11f227 625 PANTHER PTHR30509:SF1 4 242 6.6E-91 T 22-04-2016 RMET_RS07955 51794a4b521fab690b958d46b3b23fc6 83 Pfam PF06945 Protein of unknown function (DUF1289) 29 73 4.3E-17 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 RMET_RS22945 e7664c4e2454c987bb6377d533f80b36 123 Gene3D G3DSA:3.40.50.300 5 116 4.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS22945 e7664c4e2454c987bb6377d533f80b36 123 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 14 119 5.8E-23 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RMET_RS22945 e7664c4e2454c987bb6377d533f80b36 123 SUPERFAMILY SSF52540 7 120 2.33E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS22945 e7664c4e2454c987bb6377d533f80b36 123 PANTHER PTHR31715 1 122 3.6E-67 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RMET_RS13655 5a209396dd29ce51e8ff109ea5390978 387 Pfam PF13439 Glycosyltransferase Family 4 26 181 7.0E-20 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RMET_RS13655 5a209396dd29ce51e8ff109ea5390978 387 PANTHER PTHR12526 12 385 3.1E-65 T 22-04-2016 RMET_RS13655 5a209396dd29ce51e8ff109ea5390978 387 SUPERFAMILY SSF53756 15 374 3.01E-82 T 22-04-2016 RMET_RS13655 5a209396dd29ce51e8ff109ea5390978 387 Gene3D G3DSA:3.40.50.2000 166 355 1.4E-27 T 22-04-2016 RMET_RS13655 5a209396dd29ce51e8ff109ea5390978 387 Pfam PF00534 Glycosyl transferases group 1 192 341 5.7E-33 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RMET_RS09035 1222857ab7be7ff833ae0966e92e371f 267 SUPERFAMILY SSF51197 36 239 1.03E-13 T 22-04-2016 RMET_RS09035 1222857ab7be7ff833ae0966e92e371f 267 Gene3D G3DSA:2.60.120.620 190 230 6.8E-4 T 22-04-2016 RMET_RS09035 1222857ab7be7ff833ae0966e92e371f 267 Gene3D G3DSA:2.60.120.620 34 158 1.8E-9 T 22-04-2016 RMET_RS19305 a90eea510c4e7504e65866f20a654a8b 176 PANTHER PTHR11730 63 169 1.5E-31 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RMET_RS19305 a90eea510c4e7504e65866f20a654a8b 176 Pfam PF00909 Ammonium Transporter Family 93 159 9.8E-14 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RMET_RS19305 a90eea510c4e7504e65866f20a654a8b 176 Gene3D G3DSA:1.10.3430.10 85 174 1.9E-28 T 22-04-2016 IPR029020 Ammonium/urea transporter RMET_RS19305 a90eea510c4e7504e65866f20a654a8b 176 SUPERFAMILY SSF111352 88 174 5.36E-26 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RMET_RS19305 a90eea510c4e7504e65866f20a654a8b 176 PANTHER PTHR11730:SF17 63 169 1.5E-31 T 22-04-2016 RMET_RS15495 de99371ef077201a35629d95452eb207 180 PANTHER PTHR22573 15 173 2.7E-37 T 22-04-2016 RMET_RS15495 de99371ef077201a35629d95452eb207 180 Gene3D G3DSA:3.40.50.2020 15 179 3.4E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS15495 de99371ef077201a35629d95452eb207 180 Pfam PF00156 Phosphoribosyl transferase domain 15 165 4.1E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RMET_RS15495 de99371ef077201a35629d95452eb207 180 SUPERFAMILY SSF53271 14 179 5.64E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RMET_RS15495 de99371ef077201a35629d95452eb207 180 PANTHER PTHR22573:SF56 15 173 2.7E-37 T 22-04-2016 RMET_RS15155 fd088918a8adb6dcb5b65350c694e6c3 285 Pfam PF10134 Replication initiator protein A 32 261 5.9E-93 T 22-04-2016 IPR018777 Replication initiator protein A RMET_RS13485 316d7c2983b5cba35bb47eb6e269a443 158 SUPERFAMILY SSF54523 19 140 3.37E-16 T 22-04-2016 RMET_RS13485 316d7c2983b5cba35bb47eb6e269a443 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 1.6E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RMET_RS13485 316d7c2983b5cba35bb47eb6e269a443 158 Gene3D G3DSA:3.30.700.10 19 81 1.5E-4 T 22-04-2016 RMET_RS03985 d740b3136d86fbaaa0e7c93551d8d09f 306 PANTHER PTHR32196 8 304 6.7E-107 T 22-04-2016 RMET_RS03985 d740b3136d86fbaaa0e7c93551d8d09f 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 279 7.9E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS03985 d740b3136d86fbaaa0e7c93551d8d09f 306 PANTHER PTHR32196:SF33 8 304 6.7E-107 T 22-04-2016 RMET_RS21935 10421d7e8ecd9b981ca3330222e62e0e 135 SUPERFAMILY SSF90123 53 134 4.84E-12 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RMET_RS21935 10421d7e8ecd9b981ca3330222e62e0e 135 Gene3D G3DSA:1.20.1560.10 58 134 2.8E-11 T 22-04-2016 RMET_RS27855 21bd9b9a8d16f98f9090d85432d92656 129 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 39 90 9.4E-16 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 22 532 7.3E-113 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PANTHER PTHR11686 9 541 2.7E-233 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 Pfam PF01019 Gamma-glutamyltranspeptidase 36 536 1.2E-156 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 SUPERFAMILY SSF56235 7 541 1.47E-178 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PANTHER PTHR11686:SF8 9 541 2.7E-233 T 22-04-2016 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 436 453 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 234 250 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 427 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 381 399 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 263 282 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 118 136 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 136 155 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS04120 516908932fcf35b383a2ee9dc1571d38 541 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 43 68 4.0E-43 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RMET_RS09030 d664524319afa3ed9aedf6bdc67f7893 221 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 80 102 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RMET_RS09030 d664524319afa3ed9aedf6bdc67f7893 221 Pfam PF01066 CDP-alcohol phosphatidyltransferase 35 102 2.6E-10 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RMET_RS17130 8bedada1b100f787578a34f8cd8dcaa5 329 TIGRFAM TIGR03476 HpnL: putative membrane protein 1 319 3.1E-101 T 22-04-2016 RMET_RS17130 8bedada1b100f787578a34f8cd8dcaa5 329 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 6 309 1.6E-24 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RMET_RS11780 1abf7d0a1d963c37aab8d894e8856b19 119 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 16 119 1.0E-44 T 22-04-2016 IPR021356 Integrating conjugative element protein PFL4702 RMET_RS11780 1abf7d0a1d963c37aab8d894e8856b19 119 Pfam PF11190 Protein of unknown function (DUF2976) 32 118 1.5E-32 T 22-04-2016 IPR021356 Integrating conjugative element protein PFL4702 RMET_RS21330 77135b48d285ae65dbfffe915d0ce86b 210 PANTHER PTHR36153 1 208 4.0E-23 T 22-04-2016 RMET_RS21330 77135b48d285ae65dbfffe915d0ce86b 210 PANTHER PTHR36153:SF1 1 208 4.0E-23 T 22-04-2016 RMET_RS21330 77135b48d285ae65dbfffe915d0ce86b 210 Pfam PF06744 Type VI secretion protein IcmF C-terminal 145 208 2.2E-15 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal RMET_RS01030 68496c806eba5ebfa0c6b57156dc6d9d 292 SUPERFAMILY SSF53474 2 291 3.44E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS01030 68496c806eba5ebfa0c6b57156dc6d9d 292 Pfam PF00561 alpha/beta hydrolase fold 26 151 1.0E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS01030 68496c806eba5ebfa0c6b57156dc6d9d 292 PANTHER PTHR10992:SF778 1 292 1.2E-63 T 22-04-2016 RMET_RS01030 68496c806eba5ebfa0c6b57156dc6d9d 292 Gene3D G3DSA:3.40.50.1820 2 291 1.6E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS01030 68496c806eba5ebfa0c6b57156dc6d9d 292 PANTHER PTHR10992 1 292 1.2E-63 T 22-04-2016 RMET_RS09840 c4279171cfb3cd45bc8754f7ae1432a5 85 SUPERFAMILY SSF54285 1 83 3.18E-20 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RMET_RS09840 c4279171cfb3cd45bc8754f7ae1432a5 85 PANTHER PTHR33359 1 85 5.7E-19 T 22-04-2016 RMET_RS09840 c4279171cfb3cd45bc8754f7ae1432a5 85 Pfam PF02597 ThiS family 6 85 1.2E-18 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RMET_RS09840 c4279171cfb3cd45bc8754f7ae1432a5 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 4 85 8.4E-25 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 RMET_RS09840 c4279171cfb3cd45bc8754f7ae1432a5 85 Gene3D G3DSA:3.10.20.30 1 85 8.3E-24 T 22-04-2016 IPR012675 Beta-grasp domain RMET_RS11865 5c1323e7c468494372e41cf8569be9e8 630 SUPERFAMILY SSF46785 492 616 1.31E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS11865 5c1323e7c468494372e41cf8569be9e8 630 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 493 615 3.2E-48 T 22-04-2016 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal RMET_RS11865 5c1323e7c468494372e41cf8569be9e8 630 Gene3D G3DSA:2.40.10.200 566 616 4.5E-8 T 22-04-2016 RMET_RS11865 5c1323e7c468494372e41cf8569be9e8 630 Gene3D G3DSA:2.40.10.200 510 531 4.5E-8 T 22-04-2016 RMET_RS11865 5c1323e7c468494372e41cf8569be9e8 630 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 2.4E-88 T 22-04-2016 IPR022391 Integrating conjugative element relaxase, PFGI-1 class RMET_RS11865 5c1323e7c468494372e41cf8569be9e8 630 Pfam PF07514 Putative helicase 27 339 2.4E-125 T 22-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative RMET_RS03335 1ba233520e33fdde0ef8af31baf75430 418 Gene3D G3DSA:1.20.1250.20 22 208 7.4E-29 T 22-04-2016 RMET_RS03335 1ba233520e33fdde0ef8af31baf75430 418 Gene3D G3DSA:1.20.1250.20 228 414 9.4E-6 T 22-04-2016 RMET_RS03335 1ba233520e33fdde0ef8af31baf75430 418 Pfam PF07690 Major Facilitator Superfamily 31 370 5.9E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RMET_RS03335 1ba233520e33fdde0ef8af31baf75430 418 PANTHER PTHR23512:SF1 23 381 9.2E-35 T 22-04-2016 RMET_RS03335 1ba233520e33fdde0ef8af31baf75430 418 SUPERFAMILY SSF103473 5 414 1.09E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS03335 1ba233520e33fdde0ef8af31baf75430 418 PANTHER PTHR23512 23 381 9.2E-35 T 22-04-2016 RMET_RS16355 090c269182693c7c79abf2bc5b7152cc 169 Pfam PF00583 Acetyltransferase (GNAT) family 80 143 1.3E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS16355 090c269182693c7c79abf2bc5b7152cc 169 Gene3D G3DSA:3.40.630.30 4 169 3.7E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS16355 090c269182693c7c79abf2bc5b7152cc 169 SUPERFAMILY SSF55729 1 169 3.42E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS08145 9037c24d55f131ead1e96ea3bd3135b9 99 SUPERFAMILY SSF51182 3 91 1.38E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain RMET_RS08145 9037c24d55f131ead1e96ea3bd3135b9 99 Gene3D G3DSA:2.60.120.10 14 94 2.1E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RMET_RS01370 d2eb60142a52781fbb98f676d0e45ff5 367 Pfam PF02628 Cytochrome oxidase assembly protein 30 340 2.6E-84 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 RMET_RS01370 d2eb60142a52781fbb98f676d0e45ff5 367 PANTHER PTHR35457 253 365 1.4E-59 T 22-04-2016 RMET_RS01370 d2eb60142a52781fbb98f676d0e45ff5 367 PANTHER PTHR35457 86 233 1.4E-59 T 22-04-2016 RMET_RS01370 d2eb60142a52781fbb98f676d0e45ff5 367 PANTHER PTHR35457 2 70 1.4E-59 T 22-04-2016 RMET_RS01370 d2eb60142a52781fbb98f676d0e45ff5 367 PANTHER PTHR35457:SF1 253 365 1.4E-59 T 22-04-2016 RMET_RS01370 d2eb60142a52781fbb98f676d0e45ff5 367 PANTHER PTHR35457:SF1 86 233 1.4E-59 T 22-04-2016 RMET_RS01370 d2eb60142a52781fbb98f676d0e45ff5 367 PANTHER PTHR35457:SF1 2 70 1.4E-59 T 22-04-2016 RMET_RS13530 1762374a5992d6480e0959a7edabedcd 171 Pfam PF01029 NusB family 36 159 6.0E-30 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RMET_RS13530 1762374a5992d6480e0959a7edabedcd 171 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 34 161 1.1E-36 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RMET_RS13530 1762374a5992d6480e0959a7edabedcd 171 Gene3D G3DSA:1.10.940.10 32 166 2.4E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RMET_RS13530 1762374a5992d6480e0959a7edabedcd 171 PANTHER PTHR11078 32 163 1.2E-34 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RMET_RS13530 1762374a5992d6480e0959a7edabedcd 171 SUPERFAMILY SSF48013 31 163 3.14E-38 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RMET_RS13530 1762374a5992d6480e0959a7edabedcd 171 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 32 163 20.489 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RMET_RS03140 92784ccea9f41f2e5fe7e7fe84444958 218 PANTHER PTHR38033 11 209 3.0E-18 T 22-04-2016 RMET_RS03140 92784ccea9f41f2e5fe7e7fe84444958 218 Pfam PF09850 Type VI secretion system protein DotU 11 206 2.8E-39 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU RMET_RS03140 92784ccea9f41f2e5fe7e7fe84444958 218 PANTHER PTHR38033:SF1 11 209 3.0E-18 T 22-04-2016 RMET_RS03140 92784ccea9f41f2e5fe7e7fe84444958 218 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 10 212 3.6E-45 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU RMET_RS31725 09f3935032e00ceda1a4d2ba6e78cf95 120 SUPERFAMILY SSF49584 12 112 2.09E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RMET_RS31725 09f3935032e00ceda1a4d2ba6e78cf95 120 Gene3D G3DSA:2.60.40.1070 20 110 2.7E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RMET_RS31725 09f3935032e00ceda1a4d2ba6e78cf95 120 PANTHER PTHR30251 1 117 2.3E-20 T 22-04-2016 RMET_RS31725 09f3935032e00ceda1a4d2ba6e78cf95 120 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 45 108 3.5E-9 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RMET_RS31725 09f3935032e00ceda1a4d2ba6e78cf95 120 PANTHER PTHR30251:SF8 1 117 2.3E-20 T 22-04-2016 RMET_RS18035 d0b10de103331025f051633705101205 491 SUPERFAMILY SSF56954 2 30 1.96E-117 T 22-04-2016 RMET_RS18035 d0b10de103331025f051633705101205 491 SUPERFAMILY SSF56954 60 474 1.96E-117 T 22-04-2016 RMET_RS18035 d0b10de103331025f051633705101205 491 PANTHER PTHR30203 8 475 1.0E-155 T 22-04-2016 RMET_RS18035 d0b10de103331025f051633705101205 491 Pfam PF02321 Outer membrane efflux protein 69 259 5.7E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS18035 d0b10de103331025f051633705101205 491 Pfam PF02321 Outer membrane efflux protein 287 470 2.2E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RMET_RS18035 d0b10de103331025f051633705101205 491 PANTHER PTHR30203:SF15 8 475 1.0E-155 T 22-04-2016 RMET_RS18035 d0b10de103331025f051633705101205 491 Gene3D G3DSA:1.20.1600.10 59 475 1.2E-124 T 22-04-2016 RMET_RS18035 d0b10de103331025f051633705101205 491 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 472 3.1E-123 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RMET_RS30330 e0a77c7471ab249b40e75021f767120f 91 PANTHER PTHR30069:SF13 22 77 2.6E-13 T 22-04-2016 RMET_RS30330 e0a77c7471ab249b40e75021f767120f 91 PANTHER PTHR30069 22 77 2.6E-13 T 22-04-2016 RMET_RS14185 e1f4a721364ddb5798d00d71448850b0 751 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 40 685 1.9E-130 T 22-04-2016 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY RMET_RS10260 eb72ba97ccb7b1915a33fd097375168e 245 Gene3D G3DSA:3.20.20.190 3 241 1.9E-62 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RMET_RS10260 eb72ba97ccb7b1915a33fd097375168e 245 PANTHER PTHR23344:SF20 3 241 2.4E-65 T 22-04-2016 RMET_RS10260 eb72ba97ccb7b1915a33fd097375168e 245 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 239 1.5E-41 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RMET_RS10260 eb72ba97ccb7b1915a33fd097375168e 245 SUPERFAMILY SSF51695 5 241 1.28E-63 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RMET_RS10260 eb72ba97ccb7b1915a33fd097375168e 245 PANTHER PTHR23344 3 241 2.4E-65 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RMET_RS00470 4335eb7c1f977698c02025b0dbb019ef 107 Pfam PF00072 Response regulator receiver domain 11 98 2.2E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RMET_RS00470 4335eb7c1f977698c02025b0dbb019ef 107 SUPERFAMILY SSF52172 2 102 2.99E-13 T 22-04-2016 IPR011006 CheY-like superfamily RMET_RS00470 4335eb7c1f977698c02025b0dbb019ef 107 Gene3D G3DSA:3.40.50.2300 2 103 2.9E-14 T 22-04-2016 RMET_RS15315 103950c739984938e83c1bc7e6a21f7b 712 SUPERFAMILY SSF50249 211 574 8.0E-73 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RMET_RS15315 103950c739984938e83c1bc7e6a21f7b 712 SMART SM00955 235 525 9.7E-70 T 22-04-2016 RMET_RS15315 103950c739984938e83c1bc7e6a21f7b 712 Pfam PF00773 RNB domain 480 523 9.0E-10 T 22-04-2016 RMET_RS15315 103950c739984938e83c1bc7e6a21f7b 712 Pfam PF00773 RNB domain 240 476 2.1E-35 T 22-04-2016 RMET_RS15315 103950c739984938e83c1bc7e6a21f7b 712 PANTHER PTHR23355 240 586 3.8E-43 T 22-04-2016 RMET_RS15315 103950c739984938e83c1bc7e6a21f7b 712 PANTHER PTHR23355:SF5 240 586 3.8E-43 T 22-04-2016 RMET_RS30175 9f2f908b464e354334c288bd1175beb9 74 Gene3D G3DSA:3.40.50.280 1 63 7.1E-17 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS30175 9f2f908b464e354334c288bd1175beb9 74 SUPERFAMILY SSF52242 1 62 6.28E-8 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RMET_RS04420 5b81011e5c112175fc078d6df372c4cd 203 Pfam PF13590 Domain of unknown function (DUF4136) 28 186 7.1E-17 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 RMET_RS02090 1a657ce00914f56b44f087371993e652 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RMET_RS02090 1a657ce00914f56b44f087371993e652 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 117 4.2E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis RMET_RS02090 1a657ce00914f56b44f087371993e652 122 PANTHER PTHR10072 11 122 3.0E-47 T 22-04-2016 RMET_RS02090 1a657ce00914f56b44f087371993e652 122 Gene3D G3DSA:2.60.300.12 14 108 3.6E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis RMET_RS02090 1a657ce00914f56b44f087371993e652 122 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 122 36.678 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 RMET_RS02090 1a657ce00914f56b44f087371993e652 122 SUPERFAMILY SSF89360 15 108 2.55E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis RMET_RS02090 1a657ce00914f56b44f087371993e652 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 1.1E-38 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RMET_RS01995 632fca335511711300ca3796cf4a43da 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 241 9.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS01995 632fca335511711300ca3796cf4a43da 259 Gene3D G3DSA:1.10.3720.10 60 253 1.8E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS01995 632fca335511711300ca3796cf4a43da 259 PANTHER PTHR30151 1 256 9.6E-66 T 22-04-2016 RMET_RS01995 632fca335511711300ca3796cf4a43da 259 SUPERFAMILY SSF161098 60 240 2.35E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS12935 987ae847ae593d451d1c49d93f1b4ad1 205 SMART SM00479 14 187 4.3E-22 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RMET_RS12935 987ae847ae593d451d1c49d93f1b4ad1 205 PANTHER PTHR11046:SF1 6 189 3.8E-108 T 22-04-2016 RMET_RS12935 987ae847ae593d451d1c49d93f1b4ad1 205 PANTHER PTHR11046 6 189 3.8E-108 T 22-04-2016 RMET_RS12935 987ae847ae593d451d1c49d93f1b4ad1 205 Gene3D G3DSA:3.30.420.10 11 187 3.7E-75 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS12935 987ae847ae593d451d1c49d93f1b4ad1 205 SUPERFAMILY SSF53098 11 187 5.01E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS12935 987ae847ae593d451d1c49d93f1b4ad1 205 Hamap MF_00045 Oligoribonuclease [orn]. 10 188 44.254 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 RMET_RS12935 987ae847ae593d451d1c49d93f1b4ad1 205 Pfam PF00929 Exonuclease 16 177 2.2E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RMET_RS04090 98bbd8d2a6e678f12c3a0c0358d65058 127 Pfam PF01124 MAPEG family 3 123 8.4E-26 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RMET_RS04090 98bbd8d2a6e678f12c3a0c0358d65058 127 SUPERFAMILY SSF161084 3 120 1.22E-26 T 22-04-2016 RMET_RS04090 98bbd8d2a6e678f12c3a0c0358d65058 127 PANTHER PTHR35371:SF1 1 121 1.3E-26 T 22-04-2016 RMET_RS04090 98bbd8d2a6e678f12c3a0c0358d65058 127 PANTHER PTHR35371 1 121 1.3E-26 T 22-04-2016 RMET_RS04090 98bbd8d2a6e678f12c3a0c0358d65058 127 Gene3D G3DSA:1.20.120.550 3 123 4.7E-20 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RMET_RS09890 a49fa8da4d49d8d37ce9add1d9e0ec77 336 PANTHER PTHR11101 1 336 1.9E-96 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RMET_RS09890 a49fa8da4d49d8d37ce9add1d9e0ec77 336 Pfam PF01384 Phosphate transporter family 170 325 6.6E-54 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RMET_RS09890 a49fa8da4d49d8d37ce9add1d9e0ec77 336 Pfam PF01384 Phosphate transporter family 25 165 2.8E-34 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RMET_RS20885 1a0066624ff253a8c0822b9b19520171 149 Gene3D G3DSA:3.40.50.1820 19 91 1.2E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS20885 1a0066624ff253a8c0822b9b19520171 149 SUPERFAMILY SSF53474 6 148 5.56E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS20885 1a0066624ff253a8c0822b9b19520171 149 Pfam PF11339 Protein of unknown function (DUF3141) 2 149 1.5E-83 T 22-04-2016 IPR024501 Protein of unknown function DUF3141 RMET_RS23215 75406b783f33436e111732b0a0915c7d 403 Pfam PF00271 Helicase conserved C-terminal domain 339 403 6.8E-5 T 22-04-2016 IPR001650 Helicase, C-terminal RMET_RS23215 75406b783f33436e111732b0a0915c7d 403 Gene3D G3DSA:3.40.50.300 293 314 2.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS23215 75406b783f33436e111732b0a0915c7d 403 Gene3D G3DSA:3.40.50.300 183 243 2.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS23215 75406b783f33436e111732b0a0915c7d 403 Gene3D G3DSA:3.30.2060.10 64 137 9.7E-13 T 22-04-2016 RMET_RS23215 75406b783f33436e111732b0a0915c7d 403 Gene3D G3DSA:3.40.50.300 323 403 2.0E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS23215 75406b783f33436e111732b0a0915c7d 403 SUPERFAMILY SSF52540 1 319 4.32E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS23215 75406b783f33436e111732b0a0915c7d 403 PANTHER PTHR24029 1 403 7.3E-252 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RMET_RS23215 75406b783f33436e111732b0a0915c7d 403 SUPERFAMILY SSF52540 318 402 5.03E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09770 88897ef91fe596d2ff0eaa753e3a72ee 429 Gene3D G3DSA:1.20.1250.20 237 423 2.1E-22 T 22-04-2016 RMET_RS09770 88897ef91fe596d2ff0eaa753e3a72ee 429 Gene3D G3DSA:1.20.1250.20 12 218 1.1E-25 T 22-04-2016 RMET_RS09770 88897ef91fe596d2ff0eaa753e3a72ee 429 PANTHER PTHR23508 14 420 5.8E-264 T 22-04-2016 RMET_RS09770 88897ef91fe596d2ff0eaa753e3a72ee 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RMET_RS09770 88897ef91fe596d2ff0eaa753e3a72ee 429 SUPERFAMILY SSF103473 12 422 9.42E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RMET_RS09770 88897ef91fe596d2ff0eaa753e3a72ee 429 Pfam PF00083 Sugar (and other) transporter 17 417 7.3E-29 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RMET_RS09770 88897ef91fe596d2ff0eaa753e3a72ee 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RMET_RS09770 88897ef91fe596d2ff0eaa753e3a72ee 429 PANTHER PTHR23508:SF14 14 420 5.8E-264 T 22-04-2016 RMET_RS08330 dfaa08b87bdc89b87ae7714103c2b343 60 Pfam PF01610 Transposase 4 45 1.5E-8 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RMET_RS16970 5a01000eb77bd44d5b7d007380d0aac8 232 SUPERFAMILY SSF55729 33 171 5.41E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS16970 5a01000eb77bd44d5b7d007380d0aac8 232 Gene3D G3DSA:3.40.630.30 34 170 5.2E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS16970 5a01000eb77bd44d5b7d007380d0aac8 232 Pfam PF00583 Acetyltransferase (GNAT) family 94 169 3.5E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS16235 3546ad896c139e4c05c25c58ee3df98d 77 Pfam PF02416 mttA/Hcf106 family 5 49 1.9E-14 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RMET_RS16235 3546ad896c139e4c05c25c58ee3df98d 77 PANTHER PTHR33162 1 45 3.7E-15 T 22-04-2016 RMET_RS16235 3546ad896c139e4c05c25c58ee3df98d 77 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 1.0E-22 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RMET_RS16235 3546ad896c139e4c05c25c58ee3df98d 77 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 76 23.344 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RMET_RS08435 1428a98296c2dd4de2b932e73c0ed495 374 PANTHER PTHR30294 1 373 2.0E-220 T 22-04-2016 RMET_RS08435 1428a98296c2dd4de2b932e73c0ed495 374 Pfam PF12698 ABC-2 family transporter protein 23 363 1.1E-28 T 22-04-2016 RMET_RS08435 1428a98296c2dd4de2b932e73c0ed495 374 PANTHER PTHR30294:SF22 1 373 2.0E-220 T 22-04-2016 RMET_RS06045 73319dcc75c66c1b93b4a139398c0392 198 Pfam PF00227 Proteasome subunit 2 185 6.8E-9 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RMET_RS06045 73319dcc75c66c1b93b4a139398c0392 198 SUPERFAMILY SSF56235 1 186 8.57E-29 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS06045 73319dcc75c66c1b93b4a139398c0392 198 Gene3D G3DSA:3.60.20.10 2 186 2.2E-34 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS04925 151e15d720f1ed9823d27292729f0d99 380 SUPERFAMILY SSF53187 108 354 6.28E-56 T 22-04-2016 RMET_RS04925 151e15d720f1ed9823d27292729f0d99 380 PANTHER PTHR12756 1 311 2.1E-99 T 22-04-2016 RMET_RS04925 151e15d720f1ed9823d27292729f0d99 380 Gene3D G3DSA:3.40.630.10 100 349 2.9E-41 T 22-04-2016 RMET_RS04925 151e15d720f1ed9823d27292729f0d99 380 SMART SM00631 113 377 5.5E-4 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RMET_RS04925 151e15d720f1ed9823d27292729f0d99 380 PANTHER PTHR12756:SF18 1 311 2.1E-99 T 22-04-2016 RMET_RS04925 151e15d720f1ed9823d27292729f0d99 380 Pfam PF00246 Zinc carboxypeptidase 131 345 1.8E-19 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RMET_RS10190 90690366bef68264d38e444cad7d1288 255 PANTHER PTHR42208:SF1 1 240 1.7E-21 T 22-04-2016 RMET_RS10190 90690366bef68264d38e444cad7d1288 255 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 233 5.2E-48 T 22-04-2016 RMET_RS10190 90690366bef68264d38e444cad7d1288 255 PANTHER PTHR42208 1 240 1.7E-21 T 22-04-2016 RMET_RS04785 2ffb1714c683e0a26b5d1b4a3b6ad7ea 116 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 17 112 7.0E-38 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 RMET_RS04785 2ffb1714c683e0a26b5d1b4a3b6ad7ea 116 PANTHER PTHR36835 3 115 5.0E-37 T 22-04-2016 RMET_RS04785 2ffb1714c683e0a26b5d1b4a3b6ad7ea 116 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 24 96 1.1E-17 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 RMET_RS02925 bfb428fc076e5852c33ea10fa4ad7117 546 Pfam PF02470 MlaD protein 55 146 9.4E-11 T 22-04-2016 IPR003399 Mce/MlaD RMET_RS02925 bfb428fc076e5852c33ea10fa4ad7117 546 Pfam PF02470 MlaD protein 170 230 1.3E-9 T 22-04-2016 IPR003399 Mce/MlaD RMET_RS02925 bfb428fc076e5852c33ea10fa4ad7117 546 Pfam PF02470 MlaD protein 303 401 4.8E-17 T 22-04-2016 IPR003399 Mce/MlaD RMET_RS02925 bfb428fc076e5852c33ea10fa4ad7117 546 PANTHER PTHR30462:SF2 30 540 1.0E-95 T 22-04-2016 RMET_RS02925 bfb428fc076e5852c33ea10fa4ad7117 546 PANTHER PTHR30462 30 540 1.0E-95 T 22-04-2016 RMET_RS06520 28fdc6cdfe0115f7e3f0d6f369a69186 73 Pfam PF01381 Helix-turn-helix 1 44 1.5E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RMET_RS06520 28fdc6cdfe0115f7e3f0d6f369a69186 73 SUPERFAMILY SSF47413 1 61 4.57E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS06520 28fdc6cdfe0115f7e3f0d6f369a69186 73 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 2 57 1.2E-14 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RMET_RS06520 28fdc6cdfe0115f7e3f0d6f369a69186 73 Gene3D G3DSA:1.10.260.40 1 62 4.5E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS06330 a01d4c0c6f790cb257d5336f6a3f11b0 90 SUPERFAMILY SSF47598 43 84 2.33E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RMET_RS06330 a01d4c0c6f790cb257d5336f6a3f11b0 90 Gene3D G3DSA:1.10.1220.10 43 79 1.3E-6 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RMET_RS03315 fc25c6433ca420d7ecaf061d7aa80235 408 Pfam PF09594 Protein of unknown function (DUF2029) 103 325 9.1E-33 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RMET_RS11765 2d0b0887733b2e6be77bfe28d61ded24 156 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 85 132 3.7E-18 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RMET_RS11765 2d0b0887733b2e6be77bfe28d61ded24 156 Pfam PF12728 Helix-turn-helix domain 85 133 4.0E-10 T 22-04-2016 RMET_RS01120 5d9c6b4a0be52b9fab9fac7c655de891 420 SUPERFAMILY SSF56801 112 411 1.96E-33 T 22-04-2016 RMET_RS01120 5d9c6b4a0be52b9fab9fac7c655de891 420 Gene3D G3DSA:3.40.50.980 120 241 2.0E-8 T 22-04-2016 RMET_RS01120 5d9c6b4a0be52b9fab9fac7c655de891 420 PANTHER PTHR36932:SF1 10 346 2.8E-68 T 22-04-2016 RMET_RS01120 5d9c6b4a0be52b9fab9fac7c655de891 420 Gene3D G3DSA:3.30.300.30 323 409 4.9E-12 T 22-04-2016 RMET_RS01120 5d9c6b4a0be52b9fab9fac7c655de891 420 PANTHER PTHR36932 10 346 2.8E-68 T 22-04-2016 RMET_RS01120 5d9c6b4a0be52b9fab9fac7c655de891 420 Pfam PF00501 AMP-binding enzyme 124 279 5.2E-11 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS15385 5409fba5f648ea444b9beeddc480e63f 155 PANTHER PTHR35603 3 153 3.2E-19 T 22-04-2016 RMET_RS13940 3238e6d235a2042392d78f4fbe87e8b1 220 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 157 1.0E-18 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RMET_RS13940 3238e6d235a2042392d78f4fbe87e8b1 220 SUPERFAMILY SSF52540 3 194 4.57E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13940 3238e6d235a2042392d78f4fbe87e8b1 220 PANTHER PTHR13696 1 213 1.4E-20 T 22-04-2016 RMET_RS13940 3238e6d235a2042392d78f4fbe87e8b1 220 PIRSF PIRSF009320 1 199 3.3E-27 T 22-04-2016 RMET_RS13940 3238e6d235a2042392d78f4fbe87e8b1 220 Gene3D G3DSA:3.40.50.300 3 204 1.7E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS15370 46d8c396cb9b6052a8bc4d09f1c74390 561 Pfam PF13719 zinc-ribbon domain 6 42 7.9E-14 T 22-04-2016 IPR011723 Zinc finger/thioredoxin putative RMET_RS15370 46d8c396cb9b6052a8bc4d09f1c74390 561 Pfam PF11906 Protein of unknown function (DUF3426) 412 557 7.2E-41 T 22-04-2016 IPR021834 Protein of unknown function DUF3426 RMET_RS15370 46d8c396cb9b6052a8bc4d09f1c74390 561 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 7 43 2.1E-13 T 22-04-2016 IPR011723 Zinc finger/thioredoxin putative RMET_RS10750 9f37b59e0ebe0514f16fd0d9581b4d40 316 SUPERFAMILY SSF52151 41 302 1.92E-63 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RMET_RS10750 9f37b59e0ebe0514f16fd0d9581b4d40 316 Pfam PF01734 Patatin-like phospholipase 50 211 3.3E-29 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RMET_RS10750 9f37b59e0ebe0514f16fd0d9581b4d40 316 Gene3D G3DSA:3.40.1090.10 40 211 7.4E-18 T 22-04-2016 RMET_RS10750 9f37b59e0ebe0514f16fd0d9581b4d40 316 PANTHER PTHR14226 47 298 4.3E-74 T 22-04-2016 RMET_RS10750 9f37b59e0ebe0514f16fd0d9581b4d40 316 PANTHER PTHR14226:SF24 47 298 4.3E-74 T 22-04-2016 RMET_RS06765 57f2e1d1d652473d249477847b6d568a 127 Pfam PF04956 TrbC/VIRB2 family 30 117 5.6E-25 T 22-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RMET_RS09150 39335f28218658419976a8be159c2237 200 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 190 3.5E-53 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RMET_RS09150 39335f28218658419976a8be159c2237 200 Gene3D G3DSA:3.40.50.300 2 198 1.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09150 39335f28218658419976a8be159c2237 200 PANTHER PTHR10344 1 198 1.3E-63 T 22-04-2016 RMET_RS09150 39335f28218658419976a8be159c2237 200 Hamap MF_00165 Thymidylate kinase [tmk]. 4 200 29.699 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RMET_RS09150 39335f28218658419976a8be159c2237 200 SUPERFAMILY SSF52540 1 197 2.64E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS09150 39335f28218658419976a8be159c2237 200 Pfam PF02223 Thymidylate kinase 8 190 4.8E-51 T 22-04-2016 RMET_RS12275 75bd7cbe67bc75cf591b0eed2ff60b11 476 Pfam PF16980 Putative citrate transport 33 474 5.2E-198 T 22-04-2016 IPR031566 Putative citrate transporter RMET_RS03255 abad97c135ea4afcba56897bb33ba1f8 426 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 12 58 8.9E-14 T 22-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal RMET_RS29500 6a5604e1e135bb010c01bcd77620bf62 420 Gene3D G3DSA:3.40.50.300 283 341 1.1E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS29500 6a5604e1e135bb010c01bcd77620bf62 420 Gene3D G3DSA:3.40.50.300 4 125 1.1E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS29500 6a5604e1e135bb010c01bcd77620bf62 420 SMART SM00487 7 351 2.6E-10 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RMET_RS29500 6a5604e1e135bb010c01bcd77620bf62 420 SUPERFAMILY SSF52540 7 97 5.74E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS29500 6a5604e1e135bb010c01bcd77620bf62 420 SUPERFAMILY SSF52540 125 144 5.74E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS29500 6a5604e1e135bb010c01bcd77620bf62 420 SUPERFAMILY SSF52540 283 350 5.74E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03345 2040f318fff3da5ea901bfc7ad968ee2 178 PANTHER PTHR30373 29 178 4.1E-41 T 22-04-2016 RMET_RS03345 2040f318fff3da5ea901bfc7ad968ee2 178 PANTHER PTHR30373:SF3 29 178 4.1E-41 T 22-04-2016 RMET_RS03345 2040f318fff3da5ea901bfc7ad968ee2 178 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 33 151 1.0E-6 T 22-04-2016 IPR007621 TPM domain RMET_RS04605 3ed3a011829e464c68505204f7e007eb 217 Pfam PF02666 Phosphatidylserine decarboxylase 43 210 7.4E-32 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RMET_RS04605 3ed3a011829e464c68505204f7e007eb 217 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 7 214 37.444 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RMET_RS04605 3ed3a011829e464c68505204f7e007eb 217 PANTHER PTHR35809 1 217 2.5E-61 T 22-04-2016 RMET_RS04605 3ed3a011829e464c68505204f7e007eb 217 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 7 212 3.5E-70 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RMET_RS03225 744805a1149ec13a465150447e4ddda2 323 Pfam PF00482 Type II secretion system (T2SS), protein F 176 304 1.0E-20 T 22-04-2016 IPR018076 Type II secretion system F domain RMET_RS03225 744805a1149ec13a465150447e4ddda2 323 PANTHER PTHR35007 5 321 1.5E-61 T 22-04-2016 RMET_RS03225 744805a1149ec13a465150447e4ddda2 323 PANTHER PTHR35007:SF2 5 321 1.5E-61 T 22-04-2016 RMET_RS12155 e4158cdffe9cbe55165a40d9c7c96b4b 359 Pfam PF03888 MucB/RseB N-terminal domain 47 221 1.5E-55 T 22-04-2016 IPR033434 MucB/RseB, N-terminal RMET_RS12155 e4158cdffe9cbe55165a40d9c7c96b4b 359 PANTHER PTHR38782:SF1 17 356 2.5E-39 T 22-04-2016 RMET_RS12155 e4158cdffe9cbe55165a40d9c7c96b4b 359 PANTHER PTHR38782 17 356 2.5E-39 T 22-04-2016 RMET_RS12155 e4158cdffe9cbe55165a40d9c7c96b4b 359 PIRSF PIRSF005427 14 357 8.3E-100 T 22-04-2016 IPR005588 MucB/RseB RMET_RS12155 e4158cdffe9cbe55165a40d9c7c96b4b 359 Pfam PF17188 MucB/RseB C-terminal domain 244 351 7.3E-28 T 22-04-2016 IPR033436 MucB/RseB, C-terminal RMET_RS05610 376419cc2e0980cff7ba14874ae965cb 589 Pfam PF06276 Ferric iron reductase FhuF-like transporter 398 560 8.8E-23 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain RMET_RS05610 376419cc2e0980cff7ba14874ae965cb 589 PANTHER PTHR34384:SF6 112 585 5.4E-49 T 22-04-2016 RMET_RS05610 376419cc2e0980cff7ba14874ae965cb 589 PANTHER PTHR34384 112 585 5.4E-49 T 22-04-2016 RMET_RS05610 376419cc2e0980cff7ba14874ae965cb 589 Pfam PF04183 IucA / IucC family 138 374 3.0E-50 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RMET_RS17445 54a5b8cb81a7c56f5b64db888ccfa45f 77 Pfam PF13441 YMGG-like Gly-zipper 27 71 2.4E-8 T 22-04-2016 IPR027367 YMGG-like Gly-zipper RMET_RS10870 45d2afb67c28831a4b0d663e4094923b 419 Gene3D G3DSA:3.40.50.620 258 350 4.6E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RMET_RS10870 45d2afb67c28831a4b0d663e4094923b 419 SUPERFAMILY SSF52402 138 349 1.88E-8 T 22-04-2016 RMET_RS13780 1062c78d4805da395ecc1bb2b1325e41 408 Pfam PF01757 Acyltransferase family 43 366 1.1E-27 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RMET_RS08250 d3bd31c073879d3a091e46e0454de822 412 Gene3D G3DSA:3.40.50.2300 162 313 2.1E-16 T 22-04-2016 RMET_RS08250 d3bd31c073879d3a091e46e0454de822 412 SUPERFAMILY SSF53822 38 410 1.67E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS08250 d3bd31c073879d3a091e46e0454de822 412 Gene3D G3DSA:3.40.50.2300 314 364 2.9E-31 T 22-04-2016 RMET_RS08250 d3bd31c073879d3a091e46e0454de822 412 Gene3D G3DSA:3.40.50.2300 35 157 2.9E-31 T 22-04-2016 RMET_RS08250 d3bd31c073879d3a091e46e0454de822 412 PANTHER PTHR30483 33 412 1.9E-209 T 22-04-2016 RMET_RS08250 d3bd31c073879d3a091e46e0454de822 412 PANTHER PTHR30483:SF17 33 412 1.9E-209 T 22-04-2016 RMET_RS08250 d3bd31c073879d3a091e46e0454de822 412 Pfam PF13458 Periplasmic binding protein 38 375 2.8E-90 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS17650 0adeb835ef75e2d5e96227d9552277a7 382 PANTHER PTHR30483 4 380 1.8E-143 T 22-04-2016 RMET_RS17650 0adeb835ef75e2d5e96227d9552277a7 382 Pfam PF13458 Periplasmic binding protein 24 376 2.4E-54 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS17650 0adeb835ef75e2d5e96227d9552277a7 382 Gene3D G3DSA:3.40.50.2300 24 218 2.5E-46 T 22-04-2016 RMET_RS17650 0adeb835ef75e2d5e96227d9552277a7 382 PANTHER PTHR30483:SF7 4 380 1.8E-143 T 22-04-2016 RMET_RS17650 0adeb835ef75e2d5e96227d9552277a7 382 SUPERFAMILY SSF53822 25 380 1.93E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS05790 bf3d3bb6a3bcc8bc0c6520bb9723d6af 133 SUPERFAMILY SSF54637 2 133 3.23E-36 T 22-04-2016 IPR029069 HotDog domain RMET_RS05790 bf3d3bb6a3bcc8bc0c6520bb9723d6af 133 Gene3D G3DSA:3.10.129.10 4 132 2.6E-38 T 22-04-2016 IPR029069 HotDog domain RMET_RS05790 bf3d3bb6a3bcc8bc0c6520bb9723d6af 133 PANTHER PTHR31793 3 133 3.9E-30 T 22-04-2016 RMET_RS05790 bf3d3bb6a3bcc8bc0c6520bb9723d6af 133 Pfam PF13279 Thioesterase-like superfamily 12 129 3.0E-14 T 22-04-2016 RMET_RS09590 88b69723276941e65b1d9fddb0984191 232 PANTHER PTHR14119 1 205 2.4E-109 T 22-04-2016 RMET_RS09590 88b69723276941e65b1d9fddb0984191 232 Pfam PF00857 Isochorismatase family 15 168 3.1E-28 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS09590 88b69723276941e65b1d9fddb0984191 232 Gene3D G3DSA:3.40.50.850 8 209 2.9E-47 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS09590 88b69723276941e65b1d9fddb0984191 232 PANTHER PTHR14119:SF1 1 205 2.4E-109 T 22-04-2016 RMET_RS09590 88b69723276941e65b1d9fddb0984191 232 SUPERFAMILY SSF52499 5 207 2.49E-46 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS18885 979a973f34aa086af7536e230ad0d39e 159 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 149 5.6E-17 T 22-04-2016 IPR024478 4HB MCP domain RMET_RS00855 d827bb56e397366040dbcd101fb162f3 147 Pfam PF14083 PGDYG protein 40 140 1.4E-51 T 22-04-2016 IPR025688 PGDYG protein RMET_RS17865 ffc8d5755e1123f9609cc23d1d83c6f8 69 Pfam PF11755 Protein of unknown function (DUF3311) 7 65 1.4E-21 T 22-04-2016 IPR021741 Protein of unknown function DUF3311 RMET_RS15435 701809a53423ddb9e6140a68cb909e2f 195 Pfam PF04366 Las17-binding protein actin regulator 108 191 1.0E-14 T 22-04-2016 IPR007461 Ysc84 actin-binding domain RMET_RS02715 2af9c88280fe6d917295fe74c6c03ec8 206 PANTHER PTHR30625 1 201 4.4E-49 T 22-04-2016 RMET_RS02715 2af9c88280fe6d917295fe74c6c03ec8 206 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 190 6.4E-35 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RMET_RS11145 19412f5f523a239016be06fdd2cb7d48 347 Gene3D G3DSA:1.10.3720.10 141 334 9.1E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11145 19412f5f523a239016be06fdd2cb7d48 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 168 332 1.5E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11145 19412f5f523a239016be06fdd2cb7d48 347 SUPERFAMILY SSF161098 143 323 3.92E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RMET_RS11145 19412f5f523a239016be06fdd2cb7d48 347 PANTHER PTHR30151:SF15 11 342 2.5E-97 T 22-04-2016 RMET_RS11145 19412f5f523a239016be06fdd2cb7d48 347 PANTHER PTHR30151 11 342 2.5E-97 T 22-04-2016 RMET_RS07870 fb7b8eb50949abd9a81707ff710e81ab 278 Pfam PF00665 Integrase core domain 116 231 3.0E-27 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RMET_RS07870 fb7b8eb50949abd9a81707ff710e81ab 278 PANTHER PTHR32552 3 274 1.3E-76 T 22-04-2016 RMET_RS07870 fb7b8eb50949abd9a81707ff710e81ab 278 Gene3D G3DSA:3.30.420.10 110 268 3.4E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS07870 fb7b8eb50949abd9a81707ff710e81ab 278 SUPERFAMILY SSF53098 111 270 4.25E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS07870 fb7b8eb50949abd9a81707ff710e81ab 278 Pfam PF13276 HTH-like domain 39 93 1.9E-20 T 22-04-2016 IPR025948 HTH-like domain RMET_RS04765 b794ed82d74c46e5b33afbacfb5a591e 157 Gene3D G3DSA:3.10.129.10 7 152 2.2E-36 T 22-04-2016 IPR029069 HotDog domain RMET_RS04765 b794ed82d74c46e5b33afbacfb5a591e 157 SUPERFAMILY SSF54637 7 153 1.22E-36 T 22-04-2016 IPR029069 HotDog domain RMET_RS04765 b794ed82d74c46e5b33afbacfb5a591e 157 PANTHER PTHR13078 15 152 4.2E-37 T 22-04-2016 RMET_RS04765 b794ed82d74c46e5b33afbacfb5a591e 157 Pfam PF01575 MaoC like domain 14 120 3.9E-26 T 22-04-2016 IPR002539 MaoC-like domain RMET_RS07125 f99de8ff7e90bfb9c9f89a59f9e756d3 361 Gene3D G3DSA:3.40.630.10 330 343 1.2E-26 T 22-04-2016 RMET_RS07125 f99de8ff7e90bfb9c9f89a59f9e756d3 361 Gene3D G3DSA:3.40.630.10 189 274 1.2E-26 T 22-04-2016 RMET_RS07125 f99de8ff7e90bfb9c9f89a59f9e756d3 361 Gene3D G3DSA:3.40.630.10 8 134 1.2E-26 T 22-04-2016 RMET_RS07125 f99de8ff7e90bfb9c9f89a59f9e756d3 361 Pfam PF10994 Protein of unknown function (DUF2817) 10 350 1.0E-135 T 22-04-2016 IPR021259 Protein of unknown function DUF2817 RMET_RS07125 f99de8ff7e90bfb9c9f89a59f9e756d3 361 SUPERFAMILY SSF53187 180 262 1.16E-19 T 22-04-2016 RMET_RS07125 f99de8ff7e90bfb9c9f89a59f9e756d3 361 SUPERFAMILY SSF53187 12 133 1.16E-19 T 22-04-2016 RMET_RS05695 f9d590ac6858d7a2c20fb2eb629633dc 105 PANTHER PTHR34205:SF1 9 104 8.2E-49 T 22-04-2016 RMET_RS05695 f9d590ac6858d7a2c20fb2eb629633dc 105 PANTHER PTHR34205 9 104 8.2E-49 T 22-04-2016 RMET_RS05695 f9d590ac6858d7a2c20fb2eb629633dc 105 Pfam PF06127 Protein of unknown function (DUF962) 9 102 2.2E-38 T 22-04-2016 IPR009305 Protein of unknown function DUF962 RMET_RS18155 fb90ef6deff3fc832e930b94c0b8ee01 125 Pfam PF00825 Ribonuclease P 4 76 1.6E-15 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RMET_RS18155 fb90ef6deff3fc832e930b94c0b8ee01 125 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 70 3.1E-12 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RMET_RS18155 fb90ef6deff3fc832e930b94c0b8ee01 125 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 33 47 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 RMET_RS18155 fb90ef6deff3fc832e930b94c0b8ee01 125 SUPERFAMILY SSF54211 4 76 2.78E-15 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RMET_RS18155 fb90ef6deff3fc832e930b94c0b8ee01 125 Gene3D G3DSA:3.30.230.10 4 76 2.3E-17 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RMET_RS18155 fb90ef6deff3fc832e930b94c0b8ee01 125 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 1 63 2.0E-29 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RMET_RS01645 36a654481cbb6969303aabee0ab9e84b 667 Gene3D G3DSA:1.10.443.10 233 326 3.6E-8 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS01645 36a654481cbb6969303aabee0ab9e84b 667 Gene3D G3DSA:1.10.443.10 428 511 3.6E-8 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS02085 5cd261a8510ef4b1a141097fee54cf16 164 Pfam PF04519 Polymer-forming cytoskeletal 13 113 1.8E-26 T 22-04-2016 IPR007607 Protein of unknown function DUF583 RMET_RS02085 5cd261a8510ef4b1a141097fee54cf16 164 PANTHER PTHR35024 6 146 1.1E-29 T 22-04-2016 RMET_RS19200 a22b7a602a9a08c97ecc0ecc4c84341e 211 SUPERFAMILY SSF56801 76 204 1.7E-18 T 22-04-2016 RMET_RS19200 a22b7a602a9a08c97ecc0ecc4c84341e 211 Gene3D G3DSA:3.40.50.980 83 204 4.4E-9 T 22-04-2016 RMET_RS19200 a22b7a602a9a08c97ecc0ecc4c84341e 211 Pfam PF00501 AMP-binding enzyme 86 203 6.2E-7 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RMET_RS13935 c5bc05afb0025e8dc0c4b3fb29a56f53 191 PANTHER PTHR23091 10 151 1.9E-15 T 22-04-2016 RMET_RS13935 c5bc05afb0025e8dc0c4b3fb29a56f53 191 SUPERFAMILY SSF55729 10 164 1.63E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS13935 c5bc05afb0025e8dc0c4b3fb29a56f53 191 Pfam PF00583 Acetyltransferase (GNAT) family 75 151 7.7E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS13935 c5bc05afb0025e8dc0c4b3fb29a56f53 191 Gene3D G3DSA:3.40.630.30 6 167 6.6E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS13565 91c14b59c80362bbc9ac474e10ea4443 301 PANTHER PTHR11122 2 76 1.2E-33 T 22-04-2016 RMET_RS13565 91c14b59c80362bbc9ac474e10ea4443 301 PANTHER PTHR11122 92 283 1.2E-33 T 22-04-2016 RMET_RS13565 91c14b59c80362bbc9ac474e10ea4443 301 Pfam PF01263 Aldose 1-epimerase 13 269 2.3E-24 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RMET_RS13565 91c14b59c80362bbc9ac474e10ea4443 301 PANTHER PTHR11122:SF14 2 76 1.2E-33 T 22-04-2016 RMET_RS13565 91c14b59c80362bbc9ac474e10ea4443 301 PANTHER PTHR11122:SF14 92 283 1.2E-33 T 22-04-2016 RMET_RS13565 91c14b59c80362bbc9ac474e10ea4443 301 Gene3D G3DSA:2.70.98.10 3 280 2.0E-38 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RMET_RS13565 91c14b59c80362bbc9ac474e10ea4443 301 SUPERFAMILY SSF74650 6 298 9.42E-48 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RMET_RS13195 87df1c2a090a8ee28354f1bde8c55e54 239 Pfam PF03641 Possible lysine decarboxylase 87 216 1.6E-32 T 22-04-2016 IPR031100 LOG family RMET_RS13195 87df1c2a090a8ee28354f1bde8c55e54 239 Gene3D G3DSA:3.40.50.450 23 226 7.3E-65 T 22-04-2016 RMET_RS13195 87df1c2a090a8ee28354f1bde8c55e54 239 SUPERFAMILY SSF102405 20 217 7.48E-59 T 22-04-2016 RMET_RS13195 87df1c2a090a8ee28354f1bde8c55e54 239 PANTHER PTHR31223 1 223 6.8E-90 T 22-04-2016 RMET_RS13195 87df1c2a090a8ee28354f1bde8c55e54 239 PANTHER PTHR31223:SF1 1 223 6.8E-90 T 22-04-2016 RMET_RS13195 87df1c2a090a8ee28354f1bde8c55e54 239 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 45 220 1.7E-45 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RMET_RS05600 f06beb4a71089b0b187a982903e81ee7 591 Pfam PF06276 Ferric iron reductase FhuF-like transporter 424 571 3.7E-31 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain RMET_RS05600 f06beb4a71089b0b187a982903e81ee7 591 Pfam PF04183 IucA / IucC family 171 396 1.4E-52 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RMET_RS05600 f06beb4a71089b0b187a982903e81ee7 591 PANTHER PTHR34384:SF1 133 591 6.1E-88 T 22-04-2016 RMET_RS05600 f06beb4a71089b0b187a982903e81ee7 591 PANTHER PTHR34384 133 591 6.1E-88 T 22-04-2016 RMET_RS03285 356981f97c6de378c71f0ce7192260be 57 Pfam PF04964 Flp/Fap pilin component 11 54 2.7E-14 T 22-04-2016 IPR007047 Flp/Fap pilin component RMET_RS21975 86d7abcc9f0509c70065002f5a8feb81 103 SUPERFAMILY SSF53850 3 75 7.49E-8 T 22-04-2016 RMET_RS21975 86d7abcc9f0509c70065002f5a8feb81 103 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 2 72 1.9E-14 T 22-04-2016 RMET_RS21975 86d7abcc9f0509c70065002f5a8feb81 103 PANTHER PTHR30043 8 91 1.0E-12 T 22-04-2016 RMET_RS21975 86d7abcc9f0509c70065002f5a8feb81 103 PANTHER PTHR30043:SF4 8 91 1.0E-12 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 RMET_RS05670 869917c256540768c7c378d356ff17ec 97 SUPERFAMILY SSF46785 10 88 5.46E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05670 869917c256540768c7c378d356ff17ec 97 Gene3D G3DSA:1.10.10.10 4 91 2.8E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS05680 4aa26143dbfb234923015ee0778d8754 146 Pfam PF09842 Predicted membrane protein (DUF2069) 23 124 1.2E-33 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane RMET_RS05515 f7246ed1ff27615f51aea7d388caae96 383 Pfam PF01103 Surface antigen 199 279 1.2E-7 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RMET_RS15450 4c937466740e005b03e8aa361b6f46ff 332 PIRSF PIRSF017082 13 332 2.0E-75 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS15450 4c937466740e005b03e8aa361b6f46ff 332 PANTHER PTHR30349:SF32 19 290 4.0E-84 T 22-04-2016 RMET_RS15450 4c937466740e005b03e8aa361b6f46ff 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 327 6.0E-86 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS15450 4c937466740e005b03e8aa361b6f46ff 332 SUPERFAMILY SSF53850 117 294 1.27E-12 T 22-04-2016 RMET_RS15450 4c937466740e005b03e8aa361b6f46ff 332 PANTHER PTHR30349 19 290 4.0E-84 T 22-04-2016 RMET_RS06640 48641769a2188fa11a729b24964aa324 500 Gene3D G3DSA:1.10.620.20 2 494 2.2E-179 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS06640 48641769a2188fa11a729b24964aa324 500 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 18 248 1.3E-78 T 22-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 RMET_RS06640 48641769a2188fa11a729b24964aa324 500 SUPERFAMILY SSF47240 3 491 4.27E-167 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS06640 48641769a2188fa11a729b24964aa324 500 Pfam PF04945 YHS domain 408 447 5.5E-8 T 22-04-2016 IPR007029 YHS domain RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 PANTHER PTHR11707:SF29 5 319 4.2E-70 T 22-04-2016 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 89 99 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 SUPERFAMILY SSF53774 5 330 5.89E-86 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 PRINTS PR00139 Asparaginase/glutaminase family signature 8 19 1.1E-19 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 PRINTS PR00139 Asparaginase/glutaminase family signature 263 281 1.1E-19 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 PRINTS PR00139 Asparaginase/glutaminase family signature 88 106 1.1E-19 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 SMART SM00870 7 323 2.0E-112 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 Gene3D G3DSA:3.40.50.40 217 332 8.6E-27 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 PANTHER PTHR11707 5 319 4.2E-70 T 22-04-2016 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 Gene3D G3DSA:3.40.50.1170 6 204 3.1E-63 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 PIRSF PIRSF001220 2 331 4.7E-75 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 Pfam PF00710 Asparaginase, N-terminal 7 199 9.4E-56 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 PIRSF PIRSF500176 5 327 4.9E-66 T 22-04-2016 RMET_RS09925 a82f61722844a720f83eccebe4c885b2 333 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 10 18 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RMET_RS06695 b5fb6c3e2fe68af85cdbc7069ee56336 118 Pfam PF04663 Phenol hydroxylase conserved region 14 78 1.7E-30 T 22-04-2016 IPR006756 Phenol hydroxylase KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 RMET_RS05145 f67df049dc7a30d4c36d50357590ec21 703 Pfam PF10136 Site-specific recombinase 34 688 5.2E-240 T 22-04-2016 IPR011385 Site-specific recombinase Gcr RMET_RS05145 f67df049dc7a30d4c36d50357590ec21 703 PIRSF PIRSF015380 1 702 3.6E-231 T 22-04-2016 IPR011385 Site-specific recombinase Gcr RMET_RS17870 44faf3c06506da3e8af11fb39a1d7879 461 PANTHER PTHR11819:SF2 1 451 4.1E-28 T 22-04-2016 RMET_RS17870 44faf3c06506da3e8af11fb39a1d7879 461 PANTHER PTHR11819 1 451 4.1E-28 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS17870 44faf3c06506da3e8af11fb39a1d7879 461 Pfam PF00474 Sodium:solute symporter family 32 399 3.0E-17 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RMET_RS28475 5c70a3483c27a1651930fc1f0ad46bf6 330 PANTHER PTHR11206 1 325 2.3E-73 T 22-04-2016 RMET_RS28475 5c70a3483c27a1651930fc1f0ad46bf6 330 TIGRFAM TIGR00797 matE: MATE efflux family protein 2 326 4.6E-64 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS28475 5c70a3483c27a1651930fc1f0ad46bf6 330 PANTHER PTHR11206:SF153 1 325 2.3E-73 T 22-04-2016 RMET_RS28475 5c70a3483c27a1651930fc1f0ad46bf6 330 Pfam PF01554 MatE 3 150 8.3E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS28475 5c70a3483c27a1651930fc1f0ad46bf6 330 Pfam PF01554 MatE 217 327 6.0E-22 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RMET_RS07415 1fd7c617594f0979cba9a853859dda49 323 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 90 104 1.0E-11 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RMET_RS07415 1fd7c617594f0979cba9a853859dda49 323 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 106 124 1.0E-11 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RMET_RS07415 1fd7c617594f0979cba9a853859dda49 323 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 242 248 1.0E-11 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RMET_RS07415 1fd7c617594f0979cba9a853859dda49 323 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 198 1.0E-11 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RMET_RS07415 1fd7c617594f0979cba9a853859dda49 323 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 154 167 1.0E-11 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RMET_RS07415 1fd7c617594f0979cba9a853859dda49 323 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 50 235 8.5E-12 T 22-04-2016 IPR000477 Reverse transcriptase domain RMET_RS07415 1fd7c617594f0979cba9a853859dda49 323 Gene3D G3DSA:3.30.70.270 181 234 3.9E-4 T 22-04-2016 RMET_RS07415 1fd7c617594f0979cba9a853859dda49 323 SUPERFAMILY SSF56672 101 232 2.78E-7 T 22-04-2016 RMET_RS03120 3af9955d9b5dacfa1ae422cff4d859e3 144 Pfam PF04965 Gene 25-like lysozyme 34 115 1.8E-12 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RMET_RS03120 3af9955d9b5dacfa1ae422cff4d859e3 144 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 133 3.2E-26 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein RMET_RS03120 3af9955d9b5dacfa1ae422cff4d859e3 144 Gene3D G3DSA:3.10.450.40 34 118 1.4E-12 T 22-04-2016 RMET_RS03120 3af9955d9b5dacfa1ae422cff4d859e3 144 SUPERFAMILY SSF160719 31 126 5.75E-19 T 22-04-2016 RMET_RS11775 f5c34d7a06e0d8cf50de69b80a023374 77 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 7.7E-32 T 22-04-2016 IPR021676 Protein of unknown function DUF3262 RMET_RS11775 f5c34d7a06e0d8cf50de69b80a023374 77 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 5.6E-26 T 22-04-2016 IPR021676 Protein of unknown function DUF3262 RMET_RS02190 af6f92e8207b29fe42303d75d2291c9b 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 1.2E-24 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RMET_RS08785 02df98af487a4ed1684d8ad111e91fc1 332 PIRSF PIRSF017082 1 332 2.6E-61 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08785 02df98af487a4ed1684d8ad111e91fc1 332 PANTHER PTHR30349:SF32 17 284 8.3E-73 T 22-04-2016 RMET_RS08785 02df98af487a4ed1684d8ad111e91fc1 332 PANTHER PTHR30349 17 284 8.3E-73 T 22-04-2016 RMET_RS08785 02df98af487a4ed1684d8ad111e91fc1 332 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 6 29 1.0E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RMET_RS08785 02df98af487a4ed1684d8ad111e91fc1 332 SUPERFAMILY SSF53850 115 266 2.82E-6 T 22-04-2016 RMET_RS08785 02df98af487a4ed1684d8ad111e91fc1 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 328 2.2E-67 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 SMART SM00155 548 575 6.0E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 SMART SM00155 234 266 13.0 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 PANTHER PTHR18896:SF80 39 118 3.9E-51 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 PANTHER PTHR18896:SF80 205 382 3.9E-51 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 PANTHER PTHR18896:SF80 477 584 3.9E-51 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 Pfam PF13091 PLD-like domain 550 598 2.1E-7 T 22-04-2016 IPR025202 Phospholipase D-like domain RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 PANTHER PTHR18896 39 118 3.9E-51 T 22-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 PANTHER PTHR18896 205 382 3.9E-51 T 22-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 PANTHER PTHR18896 477 584 3.9E-51 T 22-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 Gene3D G3DSA:3.30.870.10 452 497 1.8E-14 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 Gene3D G3DSA:3.30.870.10 37 154 5.3E-14 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 Gene3D G3DSA:3.30.870.10 553 603 1.8E-14 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 Gene3D G3DSA:3.30.870.10 353 416 1.8E-14 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 Gene3D G3DSA:3.30.870.10 239 323 5.3E-14 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 SUPERFAMILY SSF56024 230 323 1.96E-22 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 SUPERFAMILY SSF56024 15 118 1.96E-22 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 SUPERFAMILY SSF56024 354 414 3.14E-14 T 22-04-2016 RMET_RS03165 99419e074a5780767d3a23ece4186e06 655 SUPERFAMILY SSF56024 549 603 3.14E-14 T 22-04-2016 RMET_RS09605 00169a349124f4dd985da36d9bb2a4b0 225 SUPERFAMILY SSF52499 19 204 1.7E-40 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS09605 00169a349124f4dd985da36d9bb2a4b0 225 PANTHER PTHR14119:SF1 19 202 2.2E-101 T 22-04-2016 RMET_RS09605 00169a349124f4dd985da36d9bb2a4b0 225 Pfam PF00857 Isochorismatase family 23 165 2.1E-24 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS09605 00169a349124f4dd985da36d9bb2a4b0 225 PANTHER PTHR14119 19 202 2.2E-101 T 22-04-2016 RMET_RS09605 00169a349124f4dd985da36d9bb2a4b0 225 Gene3D G3DSA:3.40.50.850 23 206 2.8E-41 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RMET_RS05225 0325d13a93749e7f783aaac92ddc55cd 372 PIRSF PIRSF015283 1 360 2.7E-92 T 22-04-2016 IPR016631 Regulatory, RpfE RMET_RS23710 c12b629ad551db134958d06b444435af 431 SUPERFAMILY SSF50692 380 430 7.91E-8 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RMET_RS23710 c12b629ad551db134958d06b444435af 431 Gene3D G3DSA:2.40.40.20 378 430 2.2E-4 T 22-04-2016 RMET_RS23710 c12b629ad551db134958d06b444435af 431 Gene3D G3DSA:3.40.228.10 5 159 6.5E-37 T 22-04-2016 RMET_RS23710 c12b629ad551db134958d06b444435af 431 PANTHER PTHR11615 5 430 2.4E-125 T 22-04-2016 RMET_RS23710 c12b629ad551db134958d06b444435af 431 PANTHER PTHR11615:SF114 5 430 2.4E-125 T 22-04-2016 RMET_RS23710 c12b629ad551db134958d06b444435af 431 SUPERFAMILY SSF53706 3 364 2.62E-81 T 22-04-2016 RMET_RS23710 c12b629ad551db134958d06b444435af 431 Pfam PF00384 Molybdopterin oxidoreductase 45 228 1.8E-7 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RMET_RS23710 c12b629ad551db134958d06b444435af 431 Gene3D G3DSA:3.40.50.740 174 319 4.2E-16 T 22-04-2016 RMET_RS03350 c0d5b1a34c084583ff3e86778aa0084a 274 PANTHER PTHR30373:SF2 1 217 2.0E-54 T 22-04-2016 RMET_RS03350 c0d5b1a34c084583ff3e86778aa0084a 274 PANTHER PTHR30373 1 217 2.0E-54 T 22-04-2016 RMET_RS03350 c0d5b1a34c084583ff3e86778aa0084a 274 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 35 162 5.8E-32 T 22-04-2016 IPR007621 TPM domain RMET_RS15050 c18c7e5d6b29c7c27936302a3faab24f 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 73 121 2.6E-14 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RMET_RS15050 c18c7e5d6b29c7c27936302a3faab24f 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 193 243 7.1E-10 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RMET_RS15050 c18c7e5d6b29c7c27936302a3faab24f 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 138 187 8.5E-16 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RMET_RS15050 c18c7e5d6b29c7c27936302a3faab24f 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 19 67 1.2E-17 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RMET_RS06385 f9f0a347bed362875a8a69662110e228 67 Pfam PF11127 Protein of unknown function (DUF2892) 1 63 4.2E-21 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 RMET_RS11495 57be083dfb201f0bd2b803be66ac31c7 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.2E-25 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 Gene3D G3DSA:3.40.50.1100 42 147 2.1E-24 T 22-04-2016 RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 SUPERFAMILY SSF53686 2 315 2.62E-80 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 281 6.9E-64 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 PANTHER PTHR10314:SF109 4 322 1.4E-123 T 22-04-2016 RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 Gene3D G3DSA:3.40.50.1100 1 41 3.6E-57 T 22-04-2016 RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 Gene3D G3DSA:3.40.50.1100 153 314 3.6E-57 T 22-04-2016 RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 PANTHER PTHR10314 4 322 1.4E-123 T 22-04-2016 RMET_RS05620 ab55b93eda78b8ccab8d7531412d6785 341 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 7 313 2.6E-129 T 22-04-2016 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA RMET_RS25520 661b2c64506e2cb6777dfe5a7692d4c8 204 PANTHER PTHR10160 4 204 6.2E-56 T 22-04-2016 RMET_RS25520 661b2c64506e2cb6777dfe5a7692d4c8 204 PANTHER PTHR10160:SF24 4 204 6.2E-56 T 22-04-2016 RMET_RS25520 661b2c64506e2cb6777dfe5a7692d4c8 204 Pfam PF02233 NAD(P) transhydrogenase beta subunit 1 203 4.5E-49 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RMET_RS01825 ea7ff19d52775ab0591996b149000f29 189 SUPERFAMILY SSF55961 1 146 1.59E-42 T 22-04-2016 RMET_RS01825 ea7ff19d52775ab0591996b149000f29 189 PANTHER PTHR38588:SF1 2 162 8.1E-31 T 22-04-2016 RMET_RS01825 ea7ff19d52775ab0591996b149000f29 189 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 6 145 1.6E-42 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G RMET_RS01825 ea7ff19d52775ab0591996b149000f29 189 PANTHER PTHR38588 2 162 8.1E-31 T 22-04-2016 RMET_RS01825 ea7ff19d52775ab0591996b149000f29 189 Gene3D G3DSA:3.30.530.20 1 155 4.3E-61 T 22-04-2016 IPR023393 START-like domain RMET_RS20780 495762fa0a84ad7880d209393fa0504c 451 Gene3D G3DSA:1.20.58.340 338 427 5.3E-5 T 22-04-2016 RMET_RS20780 495762fa0a84ad7880d209393fa0504c 451 SUPERFAMILY SSF143865 230 450 3.92E-38 T 22-04-2016 RMET_RS20780 495762fa0a84ad7880d209393fa0504c 451 Pfam PF01544 CorA-like Mg2+ transporter protein 232 450 2.8E-30 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RMET_RS15160 6de5cc1a42c18aa4fa1cf5c323e0aed1 93 SUPERFAMILY SSF46955 21 78 6.41E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain RMET_RS15160 6de5cc1a42c18aa4fa1cf5c323e0aed1 93 Gene3D G3DSA:1.10.10.10 21 78 2.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15160 6de5cc1a42c18aa4fa1cf5c323e0aed1 93 Pfam PF12728 Helix-turn-helix domain 22 72 1.5E-9 T 22-04-2016 RMET_RS11000 6a66daf7ae7afa77befaf9b27e0eac51 163 Pfam PF13664 Domain of unknown function (DUF4149) 19 118 4.5E-18 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 RMET_RS05965 17f8b5d36ea61c3421e718c0f6c0b7c2 326 PANTHER PTHR30349:SF32 12 288 8.5E-97 T 22-04-2016 RMET_RS05965 17f8b5d36ea61c3421e718c0f6c0b7c2 326 SUPERFAMILY SSF53850 114 287 4.71E-9 T 22-04-2016 RMET_RS05965 17f8b5d36ea61c3421e718c0f6c0b7c2 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 49 321 7.8E-85 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS05965 17f8b5d36ea61c3421e718c0f6c0b7c2 326 PIRSF PIRSF017082 1 325 3.8E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS05965 17f8b5d36ea61c3421e718c0f6c0b7c2 326 PANTHER PTHR30349 12 288 8.5E-97 T 22-04-2016 RMET_RS13670 f207daa2625e07131e15d6fe41770e7d 285 Pfam PF02706 Chain length determinant protein 19 140 7.8E-7 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RMET_RS02740 616230f2619ef9d34f00bd8be76f98f5 360 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 38 305 1.2E-18 T 22-04-2016 IPR025859 P-aminobenzoate N-oxygenase AurF RMET_RS02740 616230f2619ef9d34f00bd8be76f98f5 360 SUPERFAMILY SSF47240 89 318 2.8E-69 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS02740 616230f2619ef9d34f00bd8be76f98f5 360 Gene3D G3DSA:1.10.620.20 35 255 5.5E-21 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RMET_RS02575 1e4d2624465efeb482e015a474b72442 153 PANTHER PTHR42641 2 130 2.0E-31 T 22-04-2016 RMET_RS02575 1e4d2624465efeb482e015a474b72442 153 PANTHER PTHR42641:SF2 2 130 2.0E-31 T 22-04-2016 RMET_RS02575 1e4d2624465efeb482e015a474b72442 153 Pfam PF05232 Chlorhexidine efflux transporter 2 64 7.8E-23 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter RMET_RS02575 1e4d2624465efeb482e015a474b72442 153 Pfam PF05232 Chlorhexidine efflux transporter 72 134 1.8E-23 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter RMET_RS18055 aba9326521e980b00f792debc938ed41 299 Pfam PF07608 Protein of unknown function (DUF1571) 97 299 3.2E-52 T 22-04-2016 IPR011465 Protein of unknown function DUF1571 RMET_RS18045 e34b589a29a203787fea3dc2586ec79f 407 Pfam PF11170 Protein of unknown function (DUF2957) 66 404 1.7E-139 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 RMET_RS14190 8c11bc6f723d45fa554a6d0955c6554c 444 SUPERFAMILY SSF53335 168 299 2.22E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14190 8c11bc6f723d45fa554a6d0955c6554c 444 SUPERFAMILY SSF53335 350 411 5.45E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14190 8c11bc6f723d45fa554a6d0955c6554c 444 SUPERFAMILY SSF53335 257 287 5.45E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14190 8c11bc6f723d45fa554a6d0955c6554c 444 Gene3D G3DSA:3.40.50.150 254 305 4.5E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14190 8c11bc6f723d45fa554a6d0955c6554c 444 Gene3D G3DSA:3.40.50.150 358 412 4.5E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14190 8c11bc6f723d45fa554a6d0955c6554c 444 Gene3D G3DSA:3.40.50.150 78 119 9.3E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS14190 8c11bc6f723d45fa554a6d0955c6554c 444 SUPERFAMILY SSF53335 75 134 2.22E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS02420 3c3c43976f72751af74b2b7930387710 62 SUPERFAMILY SSF55040 21 57 1.24E-14 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RMET_RS02420 3c3c43976f72751af74b2b7930387710 62 Gene3D G3DSA:3.30.70.640 21 59 9.8E-16 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RMET_RS02420 3c3c43976f72751af74b2b7930387710 62 PANTHER PTHR22960 21 60 1.4E-18 T 22-04-2016 RMET_RS02420 3c3c43976f72751af74b2b7930387710 62 Pfam PF01967 MoaC family 21 52 1.5E-10 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RMET_RS00340 08c29fd9a7f4b13a8c7a5fcd6d9b4a41 244 PANTHER PTHR41293:SF1 2 242 1.8E-94 T 22-04-2016 RMET_RS00340 08c29fd9a7f4b13a8c7a5fcd6d9b4a41 244 PANTHER PTHR41293 2 242 1.8E-94 T 22-04-2016 RMET_RS00340 08c29fd9a7f4b13a8c7a5fcd6d9b4a41 244 Pfam PF06149 Protein of unknown function (DUF969) 8 223 1.4E-86 T 22-04-2016 IPR010374 Protein of unknown function DUF969 RMET_RS17035 55369f6cf7ed632aeb5cf74d56a71bc4 268 Pfam PF01203 Type II secretion system (T2SS), protein N 57 262 4.4E-34 T 22-04-2016 IPR022792 Type II secretion system, protein N RMET_RS05510 3f0c172c409c14fae04131120969ffd3 386 Pfam PF01103 Surface antigen 108 320 5.1E-10 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 SUPERFAMILY SSF100950 1 146 3.56E-42 T 22-04-2016 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 Gene3D G3DSA:3.30.70.260 137 196 5.3E-25 T 22-04-2016 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 Gene3D G3DSA:3.40.50.1360 1 136 6.2E-50 T 22-04-2016 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 30.529 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 PANTHER PTHR11934 1 218 4.9E-103 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 214 4.7E-61 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.7E-52 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 SUPERFAMILY SSF75445 127 198 4.06E-20 T 22-04-2016 RMET_RS07650 65d75eb1b6c42ecf2256acfabad565bf 219 PANTHER PTHR11934:SF11 1 218 4.9E-103 T 22-04-2016 RMET_RS07035 4d4ab37ca7ad5b6e537b0fb04876b944 188 Gene3D G3DSA:3.40.630.30 31 171 3.4E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS07035 4d4ab37ca7ad5b6e537b0fb04876b944 188 SUPERFAMILY SSF55729 14 156 7.38E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS07035 4d4ab37ca7ad5b6e537b0fb04876b944 188 PANTHER PTHR23091 32 172 8.5E-22 T 22-04-2016 RMET_RS07035 4d4ab37ca7ad5b6e537b0fb04876b944 188 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 36 168 4.1E-32 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 RMET_RS07035 4d4ab37ca7ad5b6e537b0fb04876b944 188 PANTHER PTHR23091:SF247 32 172 8.5E-22 T 22-04-2016 RMET_RS07035 4d4ab37ca7ad5b6e537b0fb04876b944 188 Pfam PF00583 Acetyltransferase (GNAT) family 77 146 4.6E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS11650 1aa69aaef97423234b04bce5b956a667 229 Pfam PF11679 Protein of unknown function (DUF3275) 14 222 6.1E-96 T 22-04-2016 IPR021693 Protein of unknown function DUF3275 RMET_RS24020 31fadab0324ff69902fb13ea8533fb27 315 Pfam PF00916 Sulfate permease family 1 313 1.7E-65 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RMET_RS24020 31fadab0324ff69902fb13ea8533fb27 315 PANTHER PTHR11814 1 315 2.1E-76 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 RMET_RS11795 8a23878a82fd1ed3a658a3cb29a5494b 303 Pfam PF11920 Protein of unknown function (DUF3438) 9 283 2.2E-126 T 22-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 RMET_RS11795 8a23878a82fd1ed3a658a3cb29a5494b 303 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 13 274 7.0E-113 T 22-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 RMET_RS06930 77e330bfc0f4a279d3bf12839703eec9 221 Pfam PF06821 Serine hydrolase 21 186 2.6E-54 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RMET_RS06930 77e330bfc0f4a279d3bf12839703eec9 221 SUPERFAMILY SSF53474 20 182 7.84E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS06930 77e330bfc0f4a279d3bf12839703eec9 221 Gene3D G3DSA:3.40.50.1820 18 191 2.0E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS12205 4289d5c8a5742cc3f72e55fe176ac5c8 205 PANTHER PTHR38099 84 204 4.6E-18 T 22-04-2016 RMET_RS12205 4289d5c8a5742cc3f72e55fe176ac5c8 205 Pfam PF02620 Uncharacterized ACR, COG1399 85 202 9.6E-20 T 22-04-2016 IPR003772 Protein of unknown function DUF177 RMET_RS07845 ba13ebfcd145f888511b7e1e6d53d6ea 422 Pfam PF03743 Bacterial conjugation TrbI-like protein 228 408 6.0E-58 T 22-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RMET_RS30260 0210e1cc7333992a4eb4204ffd48f482 145 SUPERFAMILY SSF51735 3 139 7.0E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS30260 0210e1cc7333992a4eb4204ffd48f482 145 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 7 138 4.9E-12 T 22-04-2016 RMET_RS30260 0210e1cc7333992a4eb4204ffd48f482 145 Gene3D G3DSA:3.40.50.720 3 140 1.9E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS03275 4e3c56a2c9b8c5f0ff38cc96575d4a30 451 SUPERFAMILY SSF52540 142 403 1.27E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03275 4e3c56a2c9b8c5f0ff38cc96575d4a30 451 Gene3D G3DSA:3.40.50.300 233 359 9.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03275 4e3c56a2c9b8c5f0ff38cc96575d4a30 451 Gene3D G3DSA:3.40.50.300 141 186 9.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS03275 4e3c56a2c9b8c5f0ff38cc96575d4a30 451 Pfam PF01078 Magnesium chelatase, subunit ChlI 157 188 6.0E-5 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain RMET_RS03275 4e3c56a2c9b8c5f0ff38cc96575d4a30 451 SMART SM00382 161 349 1.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain RMET_RS16625 c5e12adfc20773520f056758e6d564ee 104 Gene3D G3DSA:3.30.70.330 10 101 2.8E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RMET_RS16625 c5e12adfc20773520f056758e6d564ee 104 Pfam PF00276 Ribosomal protein L23 13 99 1.1E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RMET_RS16625 c5e12adfc20773520f056758e6d564ee 104 PANTHER PTHR11620 12 97 2.5E-24 T 22-04-2016 RMET_RS16625 c5e12adfc20773520f056758e6d564ee 104 SUPERFAMILY SSF54189 8 97 1.12E-29 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RMET_RS16625 c5e12adfc20773520f056758e6d564ee 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.84 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RMET_RS16220 a854ba15452aeabf63e10470a04701fd 380 Gene3D G3DSA:2.40.160.10 21 380 2.0E-97 T 22-04-2016 IPR023614 Porin domain RMET_RS16220 a854ba15452aeabf63e10470a04701fd 380 SUPERFAMILY SSF56935 21 380 1.22E-85 T 22-04-2016 RMET_RS16220 a854ba15452aeabf63e10470a04701fd 380 PRINTS PR00184 Neisseria sp. porin signature 57 82 3.3E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS16220 a854ba15452aeabf63e10470a04701fd 380 PRINTS PR00184 Neisseria sp. porin signature 313 337 3.3E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RMET_RS16220 a854ba15452aeabf63e10470a04701fd 380 Pfam PF13609 Gram-negative porin 7 341 9.2E-53 T 22-04-2016 RMET_RS14240 036b3b7f18d5fd2971c13ae7adf5ea73 208 Pfam PF03432 Relaxase/Mobilisation nuclease domain 12 202 5.3E-13 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 RMET_RS11995 d4831d0eca7aa53b74e4ab25620014a5 151 Pfam PF03918 Cytochrome C biogenesis protein 19 141 1.9E-49 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family RMET_RS11995 d4831d0eca7aa53b74e4ab25620014a5 151 PANTHER PTHR30009 1 144 2.4E-27 T 22-04-2016 RMET_RS17350 e6418d1cd7c90fd901c174ed7dc909a2 297 Pfam PF04228 Putative neutral zinc metallopeptidase 1 292 1.3E-121 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RMET_RS17350 e6418d1cd7c90fd901c174ed7dc909a2 297 PANTHER PTHR30168 2 297 8.0E-130 T 22-04-2016 RMET_RS14100 b16e1e563ff6b4a47d7aaf331bfa9a48 134 SUPERFAMILY SSF53800 6 120 2.35E-29 T 22-04-2016 RMET_RS14100 b16e1e563ff6b4a47d7aaf331bfa9a48 134 PANTHER PTHR33542 4 116 1.2E-17 T 22-04-2016 RMET_RS14100 b16e1e563ff6b4a47d7aaf331bfa9a48 134 Gene3D G3DSA:3.40.50.1400 6 121 3.9E-31 T 22-04-2016 RMET_RS14100 b16e1e563ff6b4a47d7aaf331bfa9a48 134 Pfam PF01903 CbiX 13 117 1.2E-22 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 RMET_RS11730 f1c8894d9b3da2c293c6b82c888b7b04 874 SUPERFAMILY SSF52540 82 214 3.75E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11730 f1c8894d9b3da2c293c6b82c888b7b04 874 SUPERFAMILY SSF52540 462 706 3.75E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS11730 f1c8894d9b3da2c293c6b82c888b7b04 874 Gene3D G3DSA:3.40.1140.10 628 708 7.8E-25 T 22-04-2016 RMET_RS11730 f1c8894d9b3da2c293c6b82c888b7b04 874 Gene3D G3DSA:3.40.1140.10 80 173 7.8E-25 T 22-04-2016 RMET_RS11730 f1c8894d9b3da2c293c6b82c888b7b04 874 Pfam PF02463 RecF/RecN/SMC N terminal domain 83 707 9.3E-13 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RMET_RS29905 abd18c29f190ff70db4e9d30490769a3 155 Pfam PF03814 Potassium-transporting ATPase A subunit 1 155 2.0E-69 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS29905 abd18c29f190ff70db4e9d30490769a3 155 PANTHER PTHR30607 1 155 1.6E-77 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS13345 619ffcca86855d6691763e2ebd0ef028 91 PANTHER PTHR35893 1 91 1.3E-24 T 22-04-2016 RMET_RS13345 619ffcca86855d6691763e2ebd0ef028 91 PANTHER PTHR35893:SF3 1 91 1.3E-24 T 22-04-2016 RMET_RS13345 619ffcca86855d6691763e2ebd0ef028 91 Pfam PF05957 Bacterial protein of unknown function (DUF883) 2 91 2.9E-33 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RMET_RS12580 ab999b03d05639e10545599a42cd6400 238 Pfam PF01411 tRNA synthetases class II (A) 18 98 5.4E-9 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RMET_RS12580 ab999b03d05639e10545599a42cd6400 238 PANTHER PTHR11777 11 234 6.5E-49 T 22-04-2016 RMET_RS12580 ab999b03d05639e10545599a42cd6400 238 SUPERFAMILY SSF55186 98 234 3.92E-31 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RMET_RS12580 ab999b03d05639e10545599a42cd6400 238 SUPERFAMILY SSF50447 4 94 5.65E-14 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RMET_RS12580 ab999b03d05639e10545599a42cd6400 238 SMART SM00863 191 234 2.2E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RMET_RS12580 ab999b03d05639e10545599a42cd6400 238 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 191 234 8.5E-13 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RMET_RS15760 bb01ce7985e0469c14b5b1d1283a4173 153 SUPERFAMILY SSF117070 15 67 8.89E-5 T 22-04-2016 RMET_RS14620 e168603366771d16be80b852d28732cb 273 Gene3D G3DSA:3.20.20.60 10 271 1.4E-113 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS14620 e168603366771d16be80b852d28732cb 273 PANTHER PTHR20881 7 271 2.2E-142 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RMET_RS14620 e168603366771d16be80b852d28732cb 273 PIRSF PIRSF000388 5 273 5.3E-100 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RMET_RS14620 e168603366771d16be80b852d28732cb 273 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 271 42.123 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RMET_RS14620 e168603366771d16be80b852d28732cb 273 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 12 271 5.5E-100 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RMET_RS14620 e168603366771d16be80b852d28732cb 273 SUPERFAMILY SSF51621 12 271 3.14E-104 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RMET_RS14620 e168603366771d16be80b852d28732cb 273 Pfam PF02548 Ketopantoate hydroxymethyltransferase 12 266 1.1E-110 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RMET_RS12020 750365c8ef3206570ef59aeac712d036 268 Pfam PF01925 Sulfite exporter TauE/SafE 8 262 7.1E-45 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RMET_RS12020 750365c8ef3206570ef59aeac712d036 268 PANTHER PTHR30269:SF14 9 267 6.8E-43 T 22-04-2016 RMET_RS12020 750365c8ef3206570ef59aeac712d036 268 PANTHER PTHR30269 9 267 6.8E-43 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RMET_RS15075 fe81296c8712b53ce477ed37c057b4d5 405 Pfam PF06527 TniQ 8 165 1.5E-24 T 22-04-2016 IPR009492 TniQ RMET_RS03010 763a5c1dc01884606b07a2b9f3db4862 266 Pfam PF13490 Putative zinc-finger 3 36 2.9E-7 T 22-04-2016 IPR027383 Putative zinc-finger RMET_RS13390 06774a049ace2567f1b06bc0dcd94114 424 Pfam PF10117 McrBC 5-methylcytosine restriction system component 52 385 1.2E-29 T 22-04-2016 IPR019292 5-methylcytosine restriction system component RMET_RS17530 e66a089efc37db66ffc121d8c69f616f 383 Gene3D G3DSA:3.40.50.2300 31 232 2.5E-62 T 22-04-2016 RMET_RS17530 e66a089efc37db66ffc121d8c69f616f 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 32 48 9.4E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS17530 e66a089efc37db66ffc121d8c69f616f 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 262 280 9.4E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS17530 e66a089efc37db66ffc121d8c69f616f 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 97 107 9.4E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS17530 e66a089efc37db66ffc121d8c69f616f 383 Pfam PF13458 Periplasmic binding protein 31 372 1.7E-54 T 22-04-2016 IPR028081 Leucine-binding protein domain RMET_RS17530 e66a089efc37db66ffc121d8c69f616f 383 PANTHER PTHR30483 9 380 2.9E-79 T 22-04-2016 RMET_RS17530 e66a089efc37db66ffc121d8c69f616f 383 PANTHER PTHR30483:SF20 9 380 2.9E-79 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RMET_RS17530 e66a089efc37db66ffc121d8c69f616f 383 SUPERFAMILY SSF53822 31 377 1.13E-86 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RMET_RS13905 79bf420b9c59c93f2ca76c958dbf3db6 1392 PANTHER PTHR36985 8 238 1.6E-80 T 22-04-2016 RMET_RS13905 79bf420b9c59c93f2ca76c958dbf3db6 1392 PANTHER PTHR36985 269 1341 1.6E-80 T 22-04-2016 RMET_RS13905 79bf420b9c59c93f2ca76c958dbf3db6 1392 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 995 1340 1.9E-58 T 22-04-2016 IPR007452 Translocation and assembly module TamB RMET_RS00655 b896ddf82d33ae1d0108a4d23604be95 169 Gene3D G3DSA:1.10.10.10 25 100 8.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS00655 b896ddf82d33ae1d0108a4d23604be95 169 Pfam PF01475 Ferric uptake regulator family 32 150 2.0E-9 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RMET_RS00655 b896ddf82d33ae1d0108a4d23604be95 169 PANTHER PTHR33202 27 159 1.2E-12 T 22-04-2016 RMET_RS00655 b896ddf82d33ae1d0108a4d23604be95 169 SUPERFAMILY SSF46785 27 157 5.46E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS29910 48c0f1b48ca746f509de8f459afa3775 121 PANTHER PTHR24093 25 121 1.6E-26 T 22-04-2016 RMET_RS29910 48c0f1b48ca746f509de8f459afa3775 121 PANTHER PTHR24093:SF49 25 121 1.6E-26 T 22-04-2016 RMET_RS16805 90c7bdb09ec62e85bbb9e5e013b39135 128 Pfam PF04343 Protein of unknown function, DUF488 15 120 4.8E-13 T 22-04-2016 IPR007438 Protein of unknown function DUF488 RMET_RS08385 2a2f291a9eaf8605682f57986378e7fd 1093 PANTHER PTHR38434 151 566 6.9E-67 T 22-04-2016 RMET_RS08385 2a2f291a9eaf8605682f57986378e7fd 1093 PANTHER PTHR38434 669 1091 6.9E-67 T 22-04-2016 RMET_RS08385 2a2f291a9eaf8605682f57986378e7fd 1093 Pfam PF10101 Predicted membrane protein (DUF2339) 876 1086 1.9E-36 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RMET_RS08385 2a2f291a9eaf8605682f57986378e7fd 1093 Pfam PF10101 Predicted membrane protein (DUF2339) 193 607 3.1E-112 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RMET_RS08385 2a2f291a9eaf8605682f57986378e7fd 1093 Pfam PF10101 Predicted membrane protein (DUF2339) 621 862 2.9E-13 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RMET_RS08385 2a2f291a9eaf8605682f57986378e7fd 1093 PANTHER PTHR38434:SF1 151 566 6.9E-67 T 22-04-2016 RMET_RS08385 2a2f291a9eaf8605682f57986378e7fd 1093 PANTHER PTHR38434:SF1 669 1091 6.9E-67 T 22-04-2016 RMET_RS02525 ebf9cac9ee8e4b2a101c4b66b0897401 377 SUPERFAMILY SSF46894 296 370 1.12E-9 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RMET_RS02525 ebf9cac9ee8e4b2a101c4b66b0897401 377 SMART SM00421 308 365 1.4E-4 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RMET_RS02525 ebf9cac9ee8e4b2a101c4b66b0897401 377 Gene3D G3DSA:1.10.10.10 307 369 1.1E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RMET_RS15715 e89d300c30986664201a43c158b3014f 207 SUPERFAMILY SSF47240 43 180 5.15E-17 T 22-04-2016 IPR009078 Ferritin-like superfamily RMET_RS15715 e89d300c30986664201a43c158b3014f 207 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 5 207 32.083 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RMET_RS15715 e89d300c30986664201a43c158b3014f 207 PANTHER PTHR11237 1 207 3.1E-97 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RMET_RS15715 e89d300c30986664201a43c158b3014f 207 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 46 206 2.5E-41 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RMET_RS15715 e89d300c30986664201a43c158b3014f 207 PANTHER PTHR11237:SF3 1 207 3.1E-97 T 22-04-2016 RMET_RS15715 e89d300c30986664201a43c158b3014f 207 Gene3D G3DSA:1.20.1260.10 45 175 6.6E-9 T 22-04-2016 IPR012347 Ferritin-related RMET_RS30455 747e38427b9c25610842ae5d372d09a7 81 PANTHER PTHR34383 1 81 2.1E-30 T 22-04-2016 RMET_RS30455 747e38427b9c25610842ae5d372d09a7 81 Gene3D G3DSA:3.40.50.300 2 80 4.1E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS30455 747e38427b9c25610842ae5d372d09a7 81 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 2 80 1.2E-23 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RMET_RS08285 43300da5c43d363ab6c36a1fc5ba1674 242 Pfam PF10099 Anti-sigma-K factor rskA 63 235 1.1E-28 T 22-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 RMET_RS01325 d9c7f0d186f99e80af8614752719a935 171 Pfam PF10003 Integral membrane protein (DUF2244) 32 168 1.6E-44 T 22-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane RMET_RS01325 d9c7f0d186f99e80af8614752719a935 171 PIRSF PIRSF032162 1 171 4.6E-40 T 22-04-2016 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane RMET_RS05810 b46ac5a21d517dddb55c4b0c8ed6f143 157 Pfam PF04214 Protein of unknown function, DUF 58 126 6.0E-31 T 22-04-2016 IPR007332 Protein of unknown function DUF411 RMET_RS06150 04c2fad888d3a137be75cfc80071107f 220 SMART SM00953 38 172 4.7E-35 T 22-04-2016 IPR014914 RES domain RMET_RS06150 04c2fad888d3a137be75cfc80071107f 220 Pfam PF08808 RES domain 28 175 2.1E-25 T 22-04-2016 IPR014914 RES domain RMET_RS02060 245a958463d1f8cd283b846a4a7a1432 262 Pfam PF11227 Protein of unknown function (DUF3025) 46 252 1.7E-77 T 22-04-2016 IPR021390 Protein of unknown function DUF3025 RMET_RS04385 ab39d674850a8d6258c62f09d8ece308 197 Pfam PF07209 Protein of unknown function (DUF1415) 20 187 4.7E-71 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 RMET_RS09165 341c6d82843bbf5e12ae758a7f3c08d3 96 Pfam PF16290 Domain of unknown function (DUF4936) 6 91 4.2E-29 T 22-04-2016 IPR032556 Protein of unknown function DUF4936 RMET_RS15625 a314c4fbe0262e0b6fcc4c7f46891ef6 167 Pfam PF05258 Protein of unknown function (DUF721) 16 110 1.5E-4 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 RMET_RS12505 e89d759b597ce929509f275badf1f5ba 400 Pfam PF11062 Protein of unknown function (DUF2863) 5 399 2.9E-177 T 22-04-2016 IPR021292 Protein of unknown function DUF2863 RMET_RS15025 5821cf5a98a17cd7ec35450b95826387 755 Pfam PF01526 Tn3 transposase DDE domain 346 733 1.4E-158 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RMET_RS06425 739c2b5dd547e11cda6a575a9e01fc2d 606 Pfam PF13007 Transposase C of IS166 homeodomain 83 161 7.6E-8 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain RMET_RS06425 739c2b5dd547e11cda6a575a9e01fc2d 606 PANTHER PTHR33678 48 489 3.9E-56 T 22-04-2016 RMET_RS06425 739c2b5dd547e11cda6a575a9e01fc2d 606 Pfam PF13005 zinc-finger binding domain of transposase IS66 170 211 2.2E-13 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 RMET_RS06425 739c2b5dd547e11cda6a575a9e01fc2d 606 Pfam PF03050 Transposase IS66 family 229 489 6.5E-83 T 22-04-2016 IPR004291 Transposase, IS66 RMET_RS06425 739c2b5dd547e11cda6a575a9e01fc2d 606 PANTHER PTHR33678:SF1 48 489 3.9E-56 T 22-04-2016 RMET_RS14040 deecdd1eb9da9c04b3d58e7111918300 473 PANTHER PTHR28641:SF1 127 473 2.6E-120 T 22-04-2016 RMET_RS14040 deecdd1eb9da9c04b3d58e7111918300 473 PANTHER PTHR28641 127 473 2.6E-120 T 22-04-2016 RMET_RS14040 deecdd1eb9da9c04b3d58e7111918300 473 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 120 446 1.6E-124 T 22-04-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 RMET_RS05340 1e9ea47e95ba9d9ef49bc8e3f9109cec 297 SUPERFAMILY SSF53474 8 296 2.41E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05340 1e9ea47e95ba9d9ef49bc8e3f9109cec 297 Pfam PF12697 Alpha/beta hydrolase family 33 290 1.1E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05340 1e9ea47e95ba9d9ef49bc8e3f9109cec 297 PANTHER PTHR10992 8 296 1.5E-37 T 22-04-2016 RMET_RS05340 1e9ea47e95ba9d9ef49bc8e3f9109cec 297 Gene3D G3DSA:3.40.50.1820 4 296 3.1E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS05340 1e9ea47e95ba9d9ef49bc8e3f9109cec 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 2.9E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05340 1e9ea47e95ba9d9ef49bc8e3f9109cec 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 2.9E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS05340 1e9ea47e95ba9d9ef49bc8e3f9109cec 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.9E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RMET_RS06630 00f85ecbf8216b25289ba181bb21c45c 111 Gene3D G3DSA:2.102.10.10 1 102 1.0E-27 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS06630 00f85ecbf8216b25289ba181bb21c45c 111 PANTHER PTHR21496 5 105 7.3E-16 T 22-04-2016 RMET_RS06630 00f85ecbf8216b25289ba181bb21c45c 111 Pfam PF00355 Rieske [2Fe-2S] domain 4 88 9.0E-17 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS06630 00f85ecbf8216b25289ba181bb21c45c 111 SUPERFAMILY SSF50022 1 107 6.02E-28 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RMET_RS04140 e910df04f905b9ecd7c5d804a0463bb7 153 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 145 3.6E-20 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 RMET_RS03640 f8411fbdbb935160fa458a245034ad4b 107 Pfam PF06305 Protein of unknown function (DUF1049) 23 82 3.7E-12 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 RMET_RS01930 5b7f824fb6ec5166cdde9562be1f51ac 251 PANTHER PTHR15822 3 248 3.3E-53 T 22-04-2016 RMET_RS01930 5b7f824fb6ec5166cdde9562be1f51ac 251 Gene3D G3DSA:3.60.10.10 3 181 7.1E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS01930 5b7f824fb6ec5166cdde9562be1f51ac 251 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 235 2.9E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS01930 5b7f824fb6ec5166cdde9562be1f51ac 251 PANTHER PTHR15822:SF7 3 248 3.3E-53 T 22-04-2016 RMET_RS01930 5b7f824fb6ec5166cdde9562be1f51ac 251 SUPERFAMILY SSF56219 1 242 7.2E-49 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RMET_RS14970 80d7a525acfa70de3d1b1ed2a04635da 134 Pfam PF00545 ribonuclease 48 131 1.6E-30 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 RMET_RS14970 80d7a525acfa70de3d1b1ed2a04635da 134 SUPERFAMILY SSF53933 39 132 1.89E-35 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RMET_RS14970 80d7a525acfa70de3d1b1ed2a04635da 134 Gene3D G3DSA:3.10.450.30 40 133 3.7E-40 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RMET_RS02785 8769c06882b66cdf885359871bb68ee5 577 Pfam PF10460 Peptidase M30 213 577 2.1E-195 T 22-04-2016 IPR019501 Peptidase M30, hyicolysin RMET_RS04525 1ba560e83910868a541f229da4fcc897 851 Pfam PF02687 FtsX-like permease family 730 842 1.7E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RMET_RS04525 1ba560e83910868a541f229da4fcc897 851 Pfam PF02687 FtsX-like permease family 285 391 1.9E-7 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RMET_RS04525 1ba560e83910868a541f229da4fcc897 851 PANTHER PTHR30287 11 851 3.5E-121 T 22-04-2016 RMET_RS00535 c2a3d237fab81086763d69f8670550df 607 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 16 591 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RMET_RS00535 c2a3d237fab81086763d69f8670550df 607 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 8 588 44.524 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RMET_RS00535 c2a3d237fab81086763d69f8670550df 607 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 16 584 3.8E-251 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RMET_RS00535 c2a3d237fab81086763d69f8670550df 607 PANTHER PTHR39559 7 594 1.2E-147 T 22-04-2016 RMET_RS00535 c2a3d237fab81086763d69f8670550df 607 PIRSF PIRSF000719 7 593 1.6E-269 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RMET_RS03830 02dd061e91e3dd05876688e65c484cac 295 Pfam PF06007 Phosphonate metabolism protein PhnJ 12 283 2.4E-147 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 RMET_RS03830 02dd061e91e3dd05876688e65c484cac 295 PIRSF PIRSF011468 3 292 2.3E-159 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 RMET_RS09715 ac626b59d3e4b1b2afbf691e1cb56db2 136 SUPERFAMILY SSF50891 3 97 2.24E-5 T 22-04-2016 IPR029000 Cyclophilin-like domain RMET_RS09715 ac626b59d3e4b1b2afbf691e1cb56db2 136 Pfam PF12903 Protein of unknown function (DUF3830) 7 134 3.7E-30 T 22-04-2016 IPR024532 Protein of unknown function DUF3830 RMET_RS16890 f7505c42232448844aa9fcf9920cb88f 389 Pfam PF00899 ThiF family 173 320 1.0E-5 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RMET_RS16890 f7505c42232448844aa9fcf9920cb88f 389 SUPERFAMILY SSF51735 168 292 5.9E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS16890 f7505c42232448844aa9fcf9920cb88f 389 Gene3D G3DSA:3.40.50.720 171 297 2.7E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain RMET_RS07860 ae1ec9bf4f0086f9ee03c801140a2003 306 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 10 260 1.1E-45 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system RMET_RS08060 fc09583fcfe9f6c29212b26b3080a530 412 Pfam PF01103 Surface antigen 243 383 3.3E-5 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RMET_RS13620 1d80a4765c1f760dccfb5e4a1072de75 413 Pfam PF04932 O-Antigen ligase 178 331 1.1E-20 T 22-04-2016 IPR007016 O-antigen ligase-related RMET_RS13620 1d80a4765c1f760dccfb5e4a1072de75 413 PANTHER PTHR37422 1 405 2.2E-31 T 22-04-2016 RMET_RS13620 1d80a4765c1f760dccfb5e4a1072de75 413 PANTHER PTHR37422:SF2 1 405 2.2E-31 T 22-04-2016 RMET_RS05160 3dfe5c4c2f256b730e1f34a8fc1a98a5 133 PANTHER PTHR10093:SF3 1 125 3.4E-97 T 22-04-2016 RMET_RS05160 3dfe5c4c2f256b730e1f34a8fc1a98a5 133 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.6E-70 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 RMET_RS05160 3dfe5c4c2f256b730e1f34a8fc1a98a5 133 Pfam PF01592 NifU-like N terminal domain 3 125 8.3E-57 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 RMET_RS05160 3dfe5c4c2f256b730e1f34a8fc1a98a5 133 PANTHER PTHR10093 1 125 3.4E-97 T 22-04-2016 RMET_RS05160 3dfe5c4c2f256b730e1f34a8fc1a98a5 133 SUPERFAMILY SSF82649 2 125 6.8E-49 T 22-04-2016 RMET_RS05160 3dfe5c4c2f256b730e1f34a8fc1a98a5 133 Gene3D G3DSA:3.90.1010.10 2 128 3.7E-57 T 22-04-2016 RMET_RS14880 1f575ca5d75edcf101c145dcbda49e5e 201 Gene3D G3DSA:3.40.30.10 1 199 2.3E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14880 1f575ca5d75edcf101c145dcbda49e5e 201 SUPERFAMILY SSF52833 1 199 1.26E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RMET_RS14880 1f575ca5d75edcf101c145dcbda49e5e 201 PIRSF PIRSF006386 1 201 1.2E-52 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RMET_RS14880 1f575ca5d75edcf101c145dcbda49e5e 201 PANTHER PTHR13887 1 200 4.9E-31 T 22-04-2016 RMET_RS14880 1f575ca5d75edcf101c145dcbda49e5e 201 Pfam PF01323 DSBA-like thioredoxin domain 11 199 4.7E-34 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RMET_RS15515 fd6794de2c1d3d0b60d0483a3f42fafb 251 Pfam PF01464 Transglycosylase SLT domain 100 191 7.2E-17 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RMET_RS15515 fd6794de2c1d3d0b60d0483a3f42fafb 251 PANTHER PTHR21666 72 191 1.5E-15 T 22-04-2016 RMET_RS15515 fd6794de2c1d3d0b60d0483a3f42fafb 251 Gene3D G3DSA:1.10.530.10 96 200 8.6E-24 T 22-04-2016 RMET_RS15515 fd6794de2c1d3d0b60d0483a3f42fafb 251 SUPERFAMILY SSF53955 92 207 3.11E-28 T 22-04-2016 IPR023346 Lysozyme-like domain RMET_RS11785 805d136d3c0cf55942921746e41192f9 132 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 6.8E-43 T 22-04-2016 IPR021877 Protein of unknown function DUF3487 RMET_RS11785 805d136d3c0cf55942921746e41192f9 132 Pfam PF11990 Protein of unknown function (DUF3487) 12 130 3.1E-42 T 22-04-2016 IPR021877 Protein of unknown function DUF3487 RMET_RS00310 a4ff0ec8012b7fff2f22b4c688572acb 122 Pfam PF11142 Protein of unknown function (DUF2917) 10 71 2.2E-19 T 22-04-2016 IPR021317 Protein of unknown function DUF2917 RMET_RS00920 9d8fe36529c386bc0e32dec5e46e30f5 398 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 97 324 1.8E-49 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RMET_RS00920 9d8fe36529c386bc0e32dec5e46e30f5 398 SUPERFAMILY SSF53335 28 381 2.89E-87 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RMET_RS00920 9d8fe36529c386bc0e32dec5e46e30f5 398 PANTHER PTHR12049 10 377 5.2E-49 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RMET_RS15175 91eb5e55334ba601fbe743863bf8306a 78 Gene3D G3DSA:1.10.260.40 1 48 3.7E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS15175 91eb5e55334ba601fbe743863bf8306a 78 SUPERFAMILY SSF47413 1 47 4.93E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RMET_RS08860 aff79c64ff72972331bb0b847171221c 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 325 2.4E-58 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08860 aff79c64ff72972331bb0b847171221c 330 PANTHER PTHR30349:SF1 17 296 2.0E-55 T 22-04-2016 RMET_RS08860 aff79c64ff72972331bb0b847171221c 330 PIRSF PIRSF017082 1 329 1.1E-68 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RMET_RS08860 aff79c64ff72972331bb0b847171221c 330 PANTHER PTHR30349 17 296 2.0E-55 T 22-04-2016 RMET_RS08020 87f37021b2bfb98399337a4406f88e15 137 PANTHER PTHR33452 8 136 1.4E-14 T 22-04-2016 RMET_RS08020 87f37021b2bfb98399337a4406f88e15 137 Pfam PF07681 DoxX 13 91 2.5E-15 T 22-04-2016 IPR032808 DoxX family RMET_RS17425 9bbc7fcb3e5a4c16bfed26fa52b4321e 134 Gene3D G3DSA:3.30.160.200 4 104 4.7E-30 T 22-04-2016 RMET_RS17425 9bbc7fcb3e5a4c16bfed26fa52b4321e 134 PANTHER PTHR11075 4 132 3.8E-33 T 22-04-2016 RMET_RS17425 9bbc7fcb3e5a4c16bfed26fa52b4321e 134 Pfam PF00472 RF-1 domain 4 129 3.9E-22 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RMET_RS17425 9bbc7fcb3e5a4c16bfed26fa52b4321e 134 SUPERFAMILY SSF75620 4 94 1.26E-8 T 22-04-2016 RMET_RS07310 5aded4e3f7bfc4ab80ebf76839cb3ad4 179 Gene3D G3DSA:3.90.20.10 80 125 9.0E-4 T 22-04-2016 IPR013829 Haemagglutinin, stalk GO:0019031|GO:0019064|GO:0046789 RMET_RS11715 47449feee4f9abeaeb0e1f9875c42dd8 182 Pfam PF11072 Protein of unknown function (DUF2859) 34 180 3.9E-55 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 RMET_RS11715 47449feee4f9abeaeb0e1f9875c42dd8 182 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 78 182 1.2E-42 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 RMET_RS06155 81025a437d18f0eae60f39cfa61101a8 129 Pfam PF09722 Protein of unknown function (DUF2384) 80 127 9.3E-13 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 RMET_RS08665 b4f7fed243b71719c7761637b45cc974 66 Pfam PF06945 Protein of unknown function (DUF1289) 5 51 5.1E-17 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 RMET_RS08665 b4f7fed243b71719c7761637b45cc974 66 PANTHER PTHR35175 1 57 1.7E-12 T 22-04-2016 RMET_RS08415 a3a986ef1c01612616bde56a92a56891 54 SUPERFAMILY SSF56349 1 36 5.0E-8 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RMET_RS08415 a3a986ef1c01612616bde56a92a56891 54 Gene3D G3DSA:1.10.443.10 1 49 3.0E-9 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RMET_RS15225 144478792ad1c8ecff9d860dd35b8121 116 Pfam PF11171 Protein of unknown function (DUF2958) 6 115 1.2E-48 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 RMET_RS13260 889f7e02bd2100c7be10b4485faa9c94 192 SUPERFAMILY SSF52540 2 187 1.95E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13260 889f7e02bd2100c7be10b4485faa9c94 192 Gene3D G3DSA:3.40.50.300 1 191 2.6E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RMET_RS13260 889f7e02bd2100c7be10b4485faa9c94 192 Pfam PF13671 AAA domain 4 162 1.1E-23 T 22-04-2016 RMET_RS06500 7ebcccc577146522cceaa7f608418117 287 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 70 148 1.0E-8 T 22-04-2016 IPR006894 HupH hydrogenase expression protein, C-terminal RMET_RS06500 7ebcccc577146522cceaa7f608418117 287 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 167 285 3.0E-65 T 22-04-2016 IPR006894 HupH hydrogenase expression protein, C-terminal RMET_RS06500 7ebcccc577146522cceaa7f608418117 287 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 167 281 8.5E-47 T 22-04-2016 IPR006894 HupH hydrogenase expression protein, C-terminal RMET_RS06500 7ebcccc577146522cceaa7f608418117 287 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 73 154 3.7E-9 T 22-04-2016 IPR006894 HupH hydrogenase expression protein, C-terminal RMET_RS12625 93d9bb80109711e863af63757bdca126 193 Pfam PF02417 Chromate transporter 20 177 7.6E-31 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RMET_RS12625 93d9bb80109711e863af63757bdca126 193 PANTHER PTHR33567 21 192 1.0E-29 T 22-04-2016 RMET_RS06310 d38719a8eb76b4b1197ba06ae9fa528c 253 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 129 237 1.9E-28 T 22-04-2016 IPR018754 Protein of unknown function DUF2285 RMET_RS06020 5465aaa38858d1e6abc78f8e72969a51 231 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 14 218 2.0E-5 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 RMET_RS06805 57c8f7868e96c53ca838bd65de91559c 423 Pfam PF03743 Bacterial conjugation TrbI-like protein 229 409 8.2E-58 T 22-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RMET_RS06345 7ee932dedc76ff27b92b5a80f251890e 661 Pfam PF11843 Protein of unknown function (DUF3363) 287 658 1.5E-139 T 22-04-2016 IPR021795 Protein of unknown function DUF3363 RMET_RS14370 335749a626eacfeb5eb34351ec6a9c03 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 295 1.6E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RMET_RS14370 335749a626eacfeb5eb34351ec6a9c03 311 PANTHER PTHR11795:SF371 1 310 1.2E-116 T 22-04-2016 RMET_RS14370 335749a626eacfeb5eb34351ec6a9c03 311 PANTHER PTHR11795 1 310 1.2E-116 T 22-04-2016 RMET_RS05280 a1af3d9abad5c2d7330af5cb04ae40c2 262 SUPERFAMILY SSF56235 1 234 4.19E-26 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS05280 a1af3d9abad5c2d7330af5cb04ae40c2 262 PIRSF PIRSF009120 1 242 1.0E-109 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 RMET_RS05280 a1af3d9abad5c2d7330af5cb04ae40c2 262 Gene3D G3DSA:3.60.20.10 3 208 3.2E-10 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RMET_RS07395 f21ef5c57bfcb210f20aff6a44e97135 249 PANTHER PTHR10060:SF24 6 248 1.2E-40 T 22-04-2016 RMET_RS07395 f21ef5c57bfcb210f20aff6a44e97135 249 Gene3D G3DSA:3.20.20.140 6 248 7.2E-48 T 22-04-2016 RMET_RS07395 f21ef5c57bfcb210f20aff6a44e97135 249 PANTHER PTHR10060 6 248 1.2E-40 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS07395 f21ef5c57bfcb210f20aff6a44e97135 249 PIRSF PIRSF005902 2 249 9.3E-43 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS07395 f21ef5c57bfcb210f20aff6a44e97135 249 Pfam PF01026 TatD related DNase 8 248 5.6E-44 T 22-04-2016 IPR001130 TatD family GO:0016788 RMET_RS07395 f21ef5c57bfcb210f20aff6a44e97135 249 SUPERFAMILY SSF51556 7 249 1.61E-50 T 22-04-2016 IPR032466 Metal-dependent hydrolase RMET_RS09785 4cc255c962d91727ffad55eac736b476 192 Gene3D G3DSA:3.40.630.30 5 159 1.1E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS09785 4cc255c962d91727ffad55eac736b476 192 Pfam PF00583 Acetyltransferase (GNAT) family 102 158 1.5E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RMET_RS09785 4cc255c962d91727ffad55eac736b476 192 SUPERFAMILY SSF55729 5 160 1.49E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS15510 a642b17ad49030acc498ef6cd60d214d 293 SMART SM00702 101 285 5.2E-48 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RMET_RS15510 a642b17ad49030acc498ef6cd60d214d 293 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 181 285 2.7E-17 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RMET_RS15510 a642b17ad49030acc498ef6cd60d214d 293 PANTHER PTHR10869 99 292 3.0E-81 T 22-04-2016 RMET_RS14550 c44cc7530a103d412545225bbf41b080 101 Pfam PF12112 Protein of unknown function (DUF3579) 6 95 1.7E-39 T 22-04-2016 IPR021969 Protein of unknown function DUF3579 RMET_RS24805 44514136fd0e41e4b1fd949dd98b8ae2 104 Pfam PF12857 TOBE-like domain 64 104 2.6E-12 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 RMET_RS24805 44514136fd0e41e4b1fd949dd98b8ae2 104 SUPERFAMILY SSF50331 11 96 3.68E-7 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RMET_RS01255 cd2e97a6ca77a762a0c2f36673feb578 101 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 49 1.7E-8 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain RMET_RS06430 1bf6c3401dea5e63ad178fa5084d7fe6 119 PANTHER PTHR36455 5 103 5.8E-24 T 22-04-2016 RMET_RS06430 1bf6c3401dea5e63ad178fa5084d7fe6 119 PANTHER PTHR36455:SF1 5 103 5.8E-24 T 22-04-2016 RMET_RS06430 1bf6c3401dea5e63ad178fa5084d7fe6 119 Pfam PF05717 IS66 Orf2 like protein 9 107 2.1E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 RMET_RS17780 617c1e603ef4e9e3bbbf066efd5882d6 326 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 175 308 4.2E-24 T 22-04-2016 IPR019262 Domain of unknown function DUF2272 RMET_RS07885 016f86a91ed48ae3573679757924e0a6 261 Gene3D G3DSA:1.10.357.10 27 192 5.8E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RMET_RS07885 016f86a91ed48ae3573679757924e0a6 261 PANTHER PTHR30055 24 192 1.9E-19 T 22-04-2016 RMET_RS07885 016f86a91ed48ae3573679757924e0a6 261 Pfam PF00440 Bacterial regulatory proteins, tetR family 46 92 1.1E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RMET_RS07885 016f86a91ed48ae3573679757924e0a6 261 SUPERFAMILY SSF46689 34 111 4.31E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RMET_RS20890 6cea0871aa7305ecde578800a66ef41e 252 SUPERFAMILY SSF53474 9 95 8.99E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS20890 6cea0871aa7305ecde578800a66ef41e 252 Pfam PF11339 Protein of unknown function (DUF3141) 1 252 1.6E-113 T 22-04-2016 IPR024501 Protein of unknown function DUF3141 RMET_RS15595 9cd9e91bd6e085b66028b54e1c3640ef 676 Pfam PF03169 OPT oligopeptide transporter protein 15 631 5.3E-109 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RMET_RS15595 9cd9e91bd6e085b66028b54e1c3640ef 676 PANTHER PTHR31645 2 631 1.0E-146 T 22-04-2016 RMET_RS15595 9cd9e91bd6e085b66028b54e1c3640ef 676 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 319 632 8.3E-48 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RMET_RS15595 9cd9e91bd6e085b66028b54e1c3640ef 676 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 7 295 1.3E-62 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RMET_RS15595 9cd9e91bd6e085b66028b54e1c3640ef 676 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 15 633 3.7E-218 T 22-04-2016 IPR004814 Oligopeptide transporter OPT RMET_RS15595 9cd9e91bd6e085b66028b54e1c3640ef 676 PANTHER PTHR31645:SF0 2 631 1.0E-146 T 22-04-2016 RMET_RS04575 dfa9e8d417917b4ca53a2189dd71846e 268 Pfam PF11304 Protein of unknown function (DUF3106) 64 163 5.7E-33 T 22-04-2016 IPR021455 Protein of unknown function DUF3106 RMET_RS17255 631dcf5a180c311af429b36d4a028fbd 215 SUPERFAMILY SSF53098 9 191 2.58E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS17255 631dcf5a180c311af429b36d4a028fbd 215 Gene3D G3DSA:3.30.420.10 8 193 6.7E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RMET_RS16645 f870a6f3241370ee7c187f5db8647fc3 413 Gene3D G3DSA:3.50.50.60 2 166 4.8E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16645 f870a6f3241370ee7c187f5db8647fc3 413 Gene3D G3DSA:3.50.50.60 275 351 4.8E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16645 f870a6f3241370ee7c187f5db8647fc3 413 SUPERFAMILY SSF51905 1 165 3.89E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS16645 f870a6f3241370ee7c187f5db8647fc3 413 SUPERFAMILY SSF51905 282 357 3.89E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RMET_RS04190 acc8a3db5caf20a31fd0db786c8f0d72 197 Pfam PF12779 YXWGXW repeat (2 copies) 142 166 3.0E-6 T 22-04-2016 IPR024447 YXWGXW repeat RMET_RS04190 acc8a3db5caf20a31fd0db786c8f0d72 197 Pfam PF12779 YXWGXW repeat (2 copies) 64 83 6.4E-5 T 22-04-2016 IPR024447 YXWGXW repeat RMET_RS04190 acc8a3db5caf20a31fd0db786c8f0d72 197 Pfam PF12779 YXWGXW repeat (2 copies) 175 195 0.031 T 22-04-2016 IPR024447 YXWGXW repeat RMET_RS04190 acc8a3db5caf20a31fd0db786c8f0d72 197 Pfam PF12779 YXWGXW repeat (2 copies) 87 112 5.4E-5 T 22-04-2016 IPR024447 YXWGXW repeat RMET_RS11255 425c93da3a50a749a9aee2546a8f8ce6 143 Pfam PF12779 YXWGXW repeat (2 copies) 52 79 5.1E-8 T 22-04-2016 IPR024447 YXWGXW repeat RMET_RS02765 22a699ed11e319e2e4543deb7b7cb4a7 463 PANTHER PTHR30354:SF7 1 463 4.9E-226 T 22-04-2016 RMET_RS02765 22a699ed11e319e2e4543deb7b7cb4a7 463 PANTHER PTHR30354 1 463 4.9E-226 T 22-04-2016 RMET_RS17980 9391825ffa91b4e706fd859552bdffea 122 SUPERFAMILY SSF47473 47 112 1.63E-8 T 22-04-2016 IPR011992 EF-hand domain pair RMET_RS17980 9391825ffa91b4e706fd859552bdffea 122 Pfam PF13202 EF hand 58 76 3.7E-5 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RMET_RS17980 9391825ffa91b4e706fd859552bdffea 122 Gene3D G3DSA:1.10.238.10 52 113 3.2E-7 T 22-04-2016 IPR011992 EF-hand domain pair RMET_RS11640 884edf5b32244b06f1588bb7f8aa2b70 301 Pfam PF12101 Protein of unknown function (DUF3577) 131 257 1.8E-49 T 22-04-2016 IPR021960 Protein of unknown function DUF3577 RMET_RS11640 884edf5b32244b06f1588bb7f8aa2b70 301 Pfam PF12101 Protein of unknown function (DUF3577) 5 123 3.0E-37 T 22-04-2016 IPR021960 Protein of unknown function DUF3577 RMET_RS07455 3a1029b272abd1b9500d61645a008f5d 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 6.5E-35 T 22-04-2016 IPR007948 Protein of unknown function DUF736 RMET_RS06405 196baf1f408f676d7b3eb028b8ae346e 68 Pfam PF13817 IS66 C-terminal element 17 55 9.2E-19 T 22-04-2016 RMET_RS14860 ceac38c6c1e08cdfe9c589a6f9d84fc1 107 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 9.3E-36 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 RMET_RS14860 ceac38c6c1e08cdfe9c589a6f9d84fc1 107 PANTHER PTHR10160 10 96 5.1E-33 T 22-04-2016 RMET_RS07850 d161cbb748d03f976528dd735244d2af 86 Pfam PF10038 Protein of unknown function (DUF2274) 6 71 8.6E-25 T 22-04-2016 IPR018733 Protein of unknown function DUF2274 RMET_RS08740 88819066c6faf9d0dde3e70538e8ce1b 181 Pfam PF10881 Protein of unknown function (DUF2726) 36 151 2.2E-30 T 22-04-2016 IPR024402 Domain of unknown function DUF2726 RMET_RS09535 84991f0e094f5db6694c7a098790074b 245 Pfam PF04116 Fatty acid hydroxylase superfamily 75 206 1.6E-29 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RMET_RS09535 84991f0e094f5db6694c7a098790074b 245 PANTHER PTHR11863 17 215 1.2E-18 T 22-04-2016 RMET_RS15185 8f895259c9f49f764e90706133ef00e6 172 PANTHER PTHR23091 1 169 3.8E-30 T 22-04-2016 RMET_RS15185 8f895259c9f49f764e90706133ef00e6 172 SUPERFAMILY SSF55729 3 150 5.32E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS15185 8f895259c9f49f764e90706133ef00e6 172 Gene3D G3DSA:3.40.630.30 1 134 1.8E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RMET_RS15185 8f895259c9f49f764e90706133ef00e6 172 PANTHER PTHR23091:SF237 1 169 3.8E-30 T 22-04-2016 RMET_RS15185 8f895259c9f49f764e90706133ef00e6 172 Pfam PF13527 Acetyltransferase (GNAT) domain 5 133 2.1E-14 T 22-04-2016 RMET_RS08370 42c5ff60e50f1861e3c95d5a19eb4dc3 331 SUPERFAMILY SSF53474 80 327 5.71E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08370 42c5ff60e50f1861e3c95d5a19eb4dc3 331 Gene3D G3DSA:3.40.50.1820 63 299 9.0E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS08370 42c5ff60e50f1861e3c95d5a19eb4dc3 331 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 82 223 7.6E-5 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RMET_RS07440 86c4a99084ce6c2885bb4e575c40bf5a 276 Pfam PF06067 Domain of unknown function (DUF932) 37 265 3.5E-60 T 22-04-2016 IPR026325 Protein of unknown function DUF932 RMET_RS17485 bf05a27a98053459659f4ca880174a77 73 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 35 2.0E-7 T 22-04-2016 RMET_RS17485 bf05a27a98053459659f4ca880174a77 73 Pfam PF05433 Glycine zipper 2TM domain 33 67 1.9E-6 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RMET_RS10335 de270fb2302ad069c2507153225a3be2 331 Pfam PF04116 Fatty acid hydroxylase superfamily 140 286 6.3E-33 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RMET_RS03295 707cc99f318b167fb8a7928d8684e5b9 57 Pfam PF04964 Flp/Fap pilin component 11 54 7.3E-20 T 22-04-2016 IPR007047 Flp/Fap pilin component RMET_RS08580 fca3a87bb08c7b5da5e19b71250c928f 354 Pfam PF11168 Protein of unknown function (DUF2955) 21 161 6.2E-32 T 22-04-2016 IPR022604 Protein of unknown function DUF2955 RMET_RS07430 378dd20c0d4f3cfdb60f314466679de9 116 Pfam PF11171 Protein of unknown function (DUF2958) 5 114 8.3E-47 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 RMET_RS10330 8e72039b2f9c2df7b61049e0183a1f02 291 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 218 1.7E-26 T 22-04-2016 RMET_RS07840 46f9a1c9e5203ff9bb99252027284589 333 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 104 311 3.6E-89 T 22-04-2016 IPR014142 P-type conjugative transfer protein TrbG RMET_RS07840 46f9a1c9e5203ff9bb99252027284589 333 Pfam PF03524 Conjugal transfer protein 103 322 4.4E-64 T 22-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RMET_RS01785 3ef0add6914a3896fbeefef939b50498 433 Pfam PF04966 Carbohydrate-selective porin, OprB family 49 433 6.3E-48 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RMET_RS12950 950c14cc5c3d68cabc950e69f97ca54d 105 Pfam PF09413 Putative prokaryotic signal transducing protein 1 66 2.1E-6 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 RMET_RS07480 45f38145025c8ff3665e3e8691738af2 285 Pfam PF10134 Replication initiator protein A 32 261 4.2E-92 T 22-04-2016 IPR018777 Replication initiator protein A RMET_RS14980 73fa5dc4c7f04f6e7f25164e64100e9a 222 PANTHER PTHR36701 3 219 6.5E-92 T 22-04-2016 RMET_RS14980 73fa5dc4c7f04f6e7f25164e64100e9a 222 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 1.9E-64 T 22-04-2016 IPR003828 Protein of unknown function DUF208 RMET_RS29930 9e8cc38305420b8ee2dcaff3215a1a4f 151 Gene3D G3DSA:1.20.120.620 2 77 7.9E-32 T 22-04-2016 RMET_RS29930 9e8cc38305420b8ee2dcaff3215a1a4f 151 Pfam PF13493 Domain of unknown function (DUF4118) 2 83 5.2E-28 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain RMET_RS13880 ebb22a684969d70a7500437d3ce693b0 158 Pfam PF11749 Protein of unknown function (DUF3305) 1 145 3.0E-55 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 RMET_RS02665 08f99ac3d4f3ec6a66526d8d2520b520 340 PIRSF PIRSF026166 8 340 5.5E-110 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RMET_RS02665 08f99ac3d4f3ec6a66526d8d2520b520 340 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 17 327 3.8E-101 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RMET_RS02665 08f99ac3d4f3ec6a66526d8d2520b520 340 PANTHER PTHR18640 16 330 1.9E-89 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RMET_RS03305 aab86eb7fb2e11705bbe35ebaca9f30d 412 Pfam PF09594 Protein of unknown function (DUF2029) 107 326 2.5E-36 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RMET_RS15140 ea4350fb4420cfac7fe1d6887c2e46f2 161 Pfam PF11000 Protein of unknown function (DUF2840) 12 158 1.9E-61 T 22-04-2016 IPR021263 Protein of unknown function DUF2840 RMET_RS07495 aa47f0201ba95cf2e75511df0505a53d 180 Pfam PF11000 Protein of unknown function (DUF2840) 31 177 8.1E-64 T 22-04-2016 IPR021263 Protein of unknown function DUF2840 RMET_RS15240 1d140b2fa7d677de3a7a6581bc35c6c8 397 Gene3D G3DSA:3.60.15.10 5 162 9.1E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS15240 1d140b2fa7d677de3a7a6581bc35c6c8 397 SUPERFAMILY SSF56281 4 181 1.51E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS15240 1d140b2fa7d677de3a7a6581bc35c6c8 397 SUPERFAMILY SSF56281 217 282 1.51E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase RMET_RS11800 9ea267412c98614897524d93ee834459 472 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 462 1.2E-189 T 22-04-2016 IPR021207 Integrating conjugative element protein, PFL4705 RMET_RS09140 45f72b863bfff7a28e5ce966ec47c598 136 Pfam PF07238 PilZ domain 31 119 6.4E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 RMET_RS26215 77dce80956ed4bf1227c8f1ff751c13f 299 Pfam PF13163 Protein of unknown function (DUF3999) 33 298 1.3E-72 T 22-04-2016 IPR025060 Protein of unknown function DUF3999 RMET_RS13505 6a9450e4a262d70e74d4c2a3fdd8179b 63 Pfam PF14070 Putative motility protein 2 62 1.2E-15 T 22-04-2016 IPR025906 Putative motility protein RMET_RS16820 9c53c5ffb6524c41ccfe3767178b332e 92 SUPERFAMILY SSF160272 3 89 9.15E-14 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RMET_RS16820 9c53c5ffb6524c41ccfe3767178b332e 92 Gene3D G3DSA:3.30.160.140 3 75 7.1E-8 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RMET_RS16820 9c53c5ffb6524c41ccfe3767178b332e 92 Pfam PF07369 Protein of unknown function (DUF1488) 4 81 1.8E-19 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RMET_RS08800 3b78b08e12c913e397334b18e8aa7597 306 Pfam PF13557 Putative MetA-pathway of phenol degradation 65 284 1.5E-19 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative RMET_RS04950 903bed66c3d2f1153d2fe9b4b8988f3c 391 Pfam PF05762 VWA domain containing CoxE-like protein 185 273 6.1E-8 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like RMET_RS07710 20c4076ff0728c9bcd0d88ebf9d3b5ce 278 PANTHER PTHR31611 6 230 9.6E-20 T 22-04-2016 RMET_RS07710 20c4076ff0728c9bcd0d88ebf9d3b5ce 278 Pfam PF03824 High-affinity nickel-transport protein 10 226 1.6E-14 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 RMET_RS12930 12d767ace9b9071f494498255ea1522f 293 PANTHER PTHR36838:SF2 1 293 2.8E-50 T 22-04-2016 RMET_RS12930 12d767ace9b9071f494498255ea1522f 293 Pfam PF03547 Membrane transport protein 146 286 4.9E-12 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 RMET_RS12930 12d767ace9b9071f494498255ea1522f 293 PANTHER PTHR36838 1 293 2.8E-50 T 22-04-2016 RMET_RS15040 68b6ab1b43670470ea1a9a26984f5c5e 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 196 245 7.4E-12 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RMET_RS15040 68b6ab1b43670470ea1a9a26984f5c5e 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 77 127 1.1E-11 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RMET_RS15040 68b6ab1b43670470ea1a9a26984f5c5e 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 23 73 1.8E-15 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RMET_RS15040 68b6ab1b43670470ea1a9a26984f5c5e 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 142 187 1.1E-8 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RMET_RS15200 cb3afa1ba2abd02cccc45f78575e869d 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 1.1E-58 T 22-04-2016 IPR026325 Protein of unknown function DUF932 RMET_RS14020 9ef2e4199ae7be82af97d20b67648e17 229 Pfam PF04402 Protein of unknown function (DUF541) 30 223 4.3E-28 T 22-04-2016 IPR007497 Protein of unknown function DUF541 RMET_RS09390 1a8d3325b772fec2eb3fca89461ad202 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 160 7.7E-19 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RMET_RS13590 079b776ab4f1546f902392cd144aaae4 188 Pfam PF07273 Protein of unknown function (DUF1439) 36 165 1.3E-17 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 RMET_RS11530 8b0062d57d880f5c10b24c4fcce1b214 175 Pfam PF11358 Protein of unknown function (DUF3158) 11 165 3.2E-74 T 22-04-2016 IPR021502 Protein of unknown function DUF3158 RMET_RS08715 fb5799ba28340d37bbe41faf93a8112c 443 Gene3D G3DSA:2.40.50.100 301 333 6.8E-9 T 22-04-2016 RMET_RS08715 fb5799ba28340d37bbe41faf93a8112c 443 Gene3D G3DSA:2.40.50.100 84 114 6.8E-9 T 22-04-2016 RMET_RS12355 30f058ecbd348142617ba1558ca0c563 245 Gene3D G3DSA:3.30.70.1070 166 243 1.4E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS12355 30f058ecbd348142617ba1558ca0c563 245 Pfam PF05036 Sporulation related domain 170 239 2.6E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS12355 30f058ecbd348142617ba1558ca0c563 245 SUPERFAMILY SSF110997 170 243 3.79E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RMET_RS29900 aa3afa6d060161a74a62da7565e40262 285 Pfam PF03814 Potassium-transporting ATPase A subunit 1 285 4.5E-110 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS29900 aa3afa6d060161a74a62da7565e40262 285 PANTHER PTHR30607 162 285 6.5E-127 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS29900 aa3afa6d060161a74a62da7565e40262 285 PANTHER PTHR30607 1 132 6.5E-127 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RMET_RS03245 3b565d404035372cf5c65a0f235f02f3 152 Pfam PF07811 TadE-like protein 15 57 1.9E-11 T 22-04-2016 IPR012495 TadE-like RMET_RS04745 40622d0b3dd22ef189e255d752fb1b37 155 Pfam PF06676 Protein of unknown function (DUF1178) 1 147 1.6E-53 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 RMET_RS04745 40622d0b3dd22ef189e255d752fb1b37 155 PIRSF PIRSF032131 1 152 1.8E-49 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 RMET_RS02520 acc13a5f3fcf14edbb8357fd21ae5bcd 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 9.9E-29 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RMET_RS01725 3030ce077b5269ac3ea184b25a72fd6c 69 Pfam PF10932 Protein of unknown function (DUF2783) 3 60 4.1E-31 T 22-04-2016 IPR021233 Protein of unknown function DUF2783 RMET_RS06320 e80f6968a15df3ccabe7ad7107bb6ae4 285 Pfam PF10134 Replication initiator protein A 32 261 3.0E-92 T 22-04-2016 IPR018777 Replication initiator protein A RMET_RS13470 8e68029638a51b07d82ab8e9e401269e 286 Pfam PF16074 Type IV Pilus-assembly protein W 163 266 3.7E-15 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RMET_RS15180 41bd9ea5f21e49b4fa91e80a33ecd5be 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 6.2E-35 T 22-04-2016 IPR007948 Protein of unknown function DUF736 RMET_RS13875 296b5710619783e48533488d04428eac 202 Pfam PF11748 Protein of unknown function (DUF3306) 7 124 1.8E-36 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 RMET_RS03230 de2be01262ef488835a0801893ae5467 325 Pfam PF00482 Type II secretion system (T2SS), protein F 158 283 1.7E-18 T 22-04-2016 IPR018076 Type II secretion system F domain RMET_RS03230 de2be01262ef488835a0801893ae5467 325 PANTHER PTHR35007 1 325 1.9E-58 T 22-04-2016 RMET_RS03230 de2be01262ef488835a0801893ae5467 325 PANTHER PTHR35007:SF1 1 325 1.9E-58 T 22-04-2016 RMET_RS04470 ef8ba112bc69c4dc4962ff54ed992932 191 PANTHER PTHR12608 1 191 3.2E-26 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RMET_RS04470 ef8ba112bc69c4dc4962ff54ed992932 191 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 7.9E-18 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RMET_RS04470 ef8ba112bc69c4dc4962ff54ed992932 191 Pfam PF01169 Uncharacterized protein family UPF0016 107 182 9.4E-21 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RMET_RS11515 a12e0943b8d5b0c3648dc52c6a6dd446 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 4.5E-63 T 22-04-2016 IPR021364 Protein of unknown function DUF2857 RMET_RS04350 7fe6c938bd4127262cd80d12c26ddb7d 470 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 47 450 3.6E-151 T 22-04-2016 IPR018721 Protein of unknown function DUF2252 RMET_RS04350 7fe6c938bd4127262cd80d12c26ddb7d 470 PANTHER PTHR39441 255 461 8.3E-85 T 22-04-2016 RMET_RS04350 7fe6c938bd4127262cd80d12c26ddb7d 470 PANTHER PTHR39441 9 239 8.3E-85 T 22-04-2016 RMET_RS31780 b1bbe5861dc850519f8e95c63d02ad20 325 Pfam PF14281 PD-(D/E)XK nuclease superfamily 1 111 3.0E-13 T 22-04-2016 IPR029470 PD-(D/E)XK nuclease superfamily 4 RMET_RS04580 d2a1f607e79f97116f856b32018cd276 145 Pfam PF12279 Protein of unknown function (DUF3619) 9 143 3.6E-44 T 22-04-2016 IPR022064 Protein of unknown function DUF3619 RMET_RS15030 5b711a704b47e860fe772da1df60e16c 111 Pfam PF03413 Peptidase propeptide and YPEB domain 39 96 6.9E-9 T 22-04-2016 IPR025711 PepSY domain RMET_RS01520 bad09385552c61b950becfee16acd0f5 113 Pfam PF07769 psiF repeat 79 109 4.0E-13 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat RMET_RS01520 bad09385552c61b950becfee16acd0f5 113 Pfam PF07769 psiF repeat 36 67 1.5E-13 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat RMET_RS06485 0a299172073ca1d1478de2e8194b7b2d 384 Gene3D G3DSA:1.10.645.10 284 367 3.5E-11 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS06485 0a299172073ca1d1478de2e8194b7b2d 384 SUPERFAMILY SSF56762 30 367 6.67E-35 T 22-04-2016 IPR029014 NiFe hydrogenase-like RMET_RS07805 c926e9aa63d34056157f646fd429236a 127 Pfam PF04956 TrbC/VIRB2 family 32 117 1.1E-24 T 22-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RMET_RS09615 026d078c707bfbab8119662cf3897aa0 199 Pfam PF06736 Protein of unknown function (DUF1211) 7 91 2.7E-25 T 22-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 RMET_RS00490 90dbf5dea82eed0f7d4d4ec3e03826ae 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 104 7.8E-34 T 22-04-2016 IPR014991 Protein of unknown function DUF1840 RMET_RS16020 b791419304cad5f67838f51d0011775d 166 Pfam PF14345 GDYXXLXY protein 13 158 3.8E-33 T 22-04-2016 IPR025833 GDYXXLXY protein RMET_RS16025 be23776b5de972b6ffc647493d09c66b 375 Pfam PF14351 Domain of unknown function (DUF4401) 31 368 5.6E-64 T 22-04-2016 IPR025513 Domain of unknown function DUF4401 RMET_RS12555 76d889a464f6705a96437607e4c860c3 243 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 61 215 7.2E-37 T 22-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 RMET_RS07835 d8c3e3720b156c4c4208da93b8154f40 234 SUPERFAMILY SSF54427 93 226 5.26E-29 T 22-04-2016 IPR032710 NTF2-like domain RMET_RS07835 d8c3e3720b156c4c4208da93b8154f40 234 Pfam PF04335 VirB8 protein 23 225 3.0E-70 T 22-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 RMET_RS14050 8160ef01c229e5be718bcb9dd71de4e5 356 Pfam PF05987 Bacterial protein of unknown function (DUF898) 22 349 3.4E-109 T 22-04-2016 IPR010295 Protein of unknown function DUF898 RMET_RS30730 918a83f813b4af8b127afdfcbb572126 72 Gene3D G3DSA:3.40.50.1820 40 72 1.0E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS30730 918a83f813b4af8b127afdfcbb572126 72 SUPERFAMILY SSF53474 38 72 5.17E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RMET_RS00355 7b40be4802475e35fda948ff62a62064 440 Pfam PF04892 VanZ like family 59 162 1.0E-8 T 22-04-2016 IPR006976 VanZ-like RMET_RS11845 8d8f148ee2832b120c45fce74f050a01 515 Pfam PF07916 TraG-like protein, N-terminal region 10 489 5.4E-95 T 22-04-2016 IPR012931 TraG-like, N-terminal RMET_RS12415 89d5e4afeffa6812653587ea31df2595 44 Pfam PF08085 Entericidin EcnA/B family 21 41 3.8E-7 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RMET_RS00485 24deb8bcc28da43a0453244e549e4674 144 Pfam PF05957 Bacterial protein of unknown function (DUF883) 47 137 2.8E-16 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RMET_RS11835 9e1ae1dd9affa9d3471edec2694b2c87 464 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 48 457 3.1E-177 T 22-04-2016 IPR021204 Integrating conjugative element protein, PFL4711 RMET_RS16950 b085ff2523aaa6dd6d51d50b76ec0990 265 Pfam PF08874 Domain of unknown function (DUF1835) 4 119 1.2E-27 T 22-04-2016 IPR014973 Protein of unknown function DUF1835 RMET_RS16950 b085ff2523aaa6dd6d51d50b76ec0990 265 Pfam PF12395 Protein of unknown function 149 253 5.0E-30 T 22-04-2016 IPR022123 Protein of unknown function DUF3658 RMET_RS00035 405cfbfb8269441dae9a53263590d586 412 Pfam PF04471 Restriction endonuclease 254 378 6.6E-12 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 RMET_RS11610 f0c09eb7b894e9c09336441a75f03c24 116 Pfam PF02411 MerT mercuric transport protein 1 116 9.9E-60 T 22-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 RMET_RS11745 304cfda90b256d31a4077304fa87f839 166 SUPERFAMILY SSF56019 6 164 1.57E-27 T 22-04-2016 IPR003511 HORMA domain RMET_RS15530 bdf65244d0c9a44d488e3d8a665ec240 201 Pfam PF08750 CNP1-like family 58 195 2.2E-48 T 22-04-2016 IPR014861 Uncharacterised domain CNP1 RMET_RS14005 e652b1288f8b92bd479a43e32c1ee781 106 Gene3D G3DSA:1.20.5.170 15 44 2.8E-4 T 22-04-2016 RMET_RS01355 93df246904843df246a07026d9170c01 69 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 4.9E-25 T 22-04-2016 IPR021313 Protein of unknown function DUF2909 RMET_RS00710 99a6c6bcc490b38374f0cf504c3cac0d 76 Pfam PF14375 Cysteine-rich CWC 18 62 4.1E-8 T 22-04-2016 IPR032720 Cysteine-rich CWC RMET_RS30025 3d6ce4eb357017487dabc25414ebeaa9 231 PANTHER PTHR30474 1 231 2.4E-85 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RMET_RS30025 3d6ce4eb357017487dabc25414ebeaa9 231 Pfam PF01098 Cell cycle protein 1 230 1.1E-64 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RMET_RS30025 3d6ce4eb357017487dabc25414ebeaa9 231 PANTHER PTHR30474:SF1 1 231 2.4E-85 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RMET_RS11265 72042ae34782144c3f551f2c59516035 205 Pfam PF13689 Domain of unknown function (DUF4154) 61 199 5.1E-31 T 22-04-2016 IPR025293 Protein of unknown function DUF4154 RMET_RS08930 1da05ca94d51b92cda6f63612d209486 120 Pfam PF04663 Phenol hydroxylase conserved region 15 80 1.1E-34 T 22-04-2016 IPR006756 Phenol hydroxylase KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 RMET_RS00800 018a9d68fac7ace80bbda5ef6c1ec2bd 297 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 22 294 1.4E-113 T 22-04-2016 IPR021266 Kdo hydroxylase RMET_RS07045 72d6dad87347da09baf983ea82c58d4e 369 Pfam PF08907 Domain of unknown function (DUF1853) 38 354 1.7E-87 T 22-04-2016 IPR015003 Protein of unknown function DUF1853 RMET_RS13350 6c860b2802f3f5effe8400db36046888 125 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 11 124 3.1E-24 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RMET_RS11850 9d2c66cd4b0bb6c24d8bb8f7eab83f12 119 Pfam PF12553 Protein of unknown function (DUF3742) 1 117 6.3E-47 T 22-04-2016 IPR022213 Protein of unknown function DUF3742 RMET_RS09990 01f06eaba19de5bf2c97035181ece44f 148 Pfam PF06146 Phosphate-starvation-inducible E 68 133 3.4E-16 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like RMET_RS03620 e67d047db91c8b052c2c98a5e9c76899 76 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 2.2E-19 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane RMET_RS12775 b5d125ba51ca34b9a4442b317f1ed908 277 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 129 226 8.6E-14 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RMET_RS17375 abdaf0be4aa7abca2f5ee9cb5ea79f3a 514 Pfam PF13785 Domain of unknown function (DUF4178) 287 422 4.3E-21 T 22-04-2016 IPR025235 Domain of unknown function DUF4178 RMET_RS17375 abdaf0be4aa7abca2f5ee9cb5ea79f3a 514 Pfam PF13785 Domain of unknown function (DUF4178) 68 205 2.5E-17 T 22-04-2016 IPR025235 Domain of unknown function DUF4178 RMET_RS00915 749f61f9ebb02887f8541968f1daf64f 64 Pfam PF11146 Protein of unknown function (DUF2905) 3 63 2.5E-17 T 22-04-2016 IPR021320 Protein of unknown function DUF2905 RMET_RS08500 d293eda87c0b72532c43ad0d3096ae7c 304 Pfam PF11453 Protein of unknown function (DUF2950) 32 299 1.8E-110 T 22-04-2016 IPR021556 Protein of unknown function DUF2950 RMET_RS30200 0fe6037e1b11e5f5f4033e5bf38cebb6 74 Pfam PF05227 CHASE3 domain 1 73 6.7E-14 T 22-04-2016 IPR007891 CHASE3