locus-tag class description CYCME_RS00005 PF11638 DnaA N-terminal domain CYCME_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CYCME_RS00005 PF00308 Bacterial dnaA protein CYCME_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CYCME_RS00010 PF02767 DNA polymerase III beta subunit, central domain CYCME_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CYCME_RS00015 PF02463 RecF/RecN/SMC N terminal domain CYCME_RS00020 PF18053 DNA gyrase B subunit insert domain CYCME_RS00020 PF01751 Toprim domain CYCME_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CYCME_RS00020 PF00204 DNA gyrase B CYCME_RS00035 PF02653 Branched-chain amino acid transport system / permease component CYCME_RS00045 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYCME_RS00045 PF00005 ABC transporter CYCME_RS00050 PF00005 ABC transporter CYCME_RS00055 PF01774 UreD urease accessory protein CYCME_RS00060 PF00547 Urease, gamma subunit CYCME_RS00065 PF00699 Urease beta subunit CYCME_RS00070 PF01979 Amidohydrolase family CYCME_RS00070 PF00449 Urease alpha-subunit, N-terminal domain CYCME_RS00075 PF05194 UreE urease accessory protein, C-terminal domain CYCME_RS00075 PF02814 UreE urease accessory protein, N-terminal domain CYCME_RS00085 PF01730 UreF CYCME_RS00090 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYCME_RS00105 PF02092 Glycyl-tRNA synthetase beta subunit CYCME_RS00105 PF05746 DALR anticodon binding domain CYCME_RS00110 PF02091 Glycyl-tRNA synthetase alpha subunit CYCME_RS00125 PF16916 Dimerisation domain of Zinc Transporter CYCME_RS00125 PF01545 Cation efflux family CYCME_RS00130 PF00120 Glutamine synthetase, catalytic domain CYCME_RS00130 PF03951 Glutamine synthetase, beta-Grasp domain CYCME_RS00140 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS00145 PF02954 Bacterial regulatory protein, Fis family CYCME_RS00145 PF00072 Response regulator receiver domain CYCME_RS00145 PF00158 Sigma-54 interaction domain CYCME_RS00150 PF01180 Dihydroorotate dehydrogenase CYCME_RS00155 PF00588 SpoU rRNA Methylase family CYCME_RS00160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CYCME_RS00160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CYCME_RS00165 PF02556 Preprotein translocase subunit SecB CYCME_RS00170 PF00581 Rhodanese-like domain CYCME_RS00180 PF01676 Metalloenzyme superfamily CYCME_RS00180 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CYCME_RS00185 PF01551 Peptidase family M23 CYCME_RS00190 PF13180 PDZ domain CYCME_RS00190 PF03572 Peptidase family S41 CYCME_RS00210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYCME_RS00210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYCME_RS00215 PF00561 alpha/beta hydrolase fold CYCME_RS00220 PF07021 Methionine biosynthesis protein MetW CYCME_RS00220 PF00561 alpha/beta hydrolase fold CYCME_RS00230 PF07690 Major Facilitator Superfamily CYCME_RS00235 PF03372 Endonuclease/Exonuclease/phosphatase family CYCME_RS00240 PF01197 Ribosomal protein L31 CYCME_RS00270 PF00285 Citrate synthase, C-terminal domain CYCME_RS00275 PF00905 Penicillin binding protein transpeptidase domain CYCME_RS00275 PF17092 Penicillin-binding protein OB-like domain CYCME_RS00275 PF00912 Transglycosylase CYCME_RS00280 PF11104 Type IV pilus assembly protein PilM; CYCME_RS00285 PF05137 Fimbrial assembly protein (PilN) CYCME_RS00290 PF04350 Pilus assembly protein, PilO CYCME_RS00300 PF00263 Bacterial type II and III secretion system protein CYCME_RS00300 PF11741 AMIN domain CYCME_RS00300 PF03958 Bacterial type II/III secretion system short domain CYCME_RS00300 PF07660 Secretin and TonB N terminus short domain CYCME_RS00305 PF01202 Shikimate kinase CYCME_RS00310 PF01761 3-dehydroquinate synthase CYCME_RS00320 PF00310 Glutamine amidotransferases class-II CYCME_RS00320 PF04898 Glutamate synthase central domain CYCME_RS00320 PF01645 Conserved region in glutamate synthase CYCME_RS00320 PF01493 GXGXG motif CYCME_RS00325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYCME_RS00325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS00330 PF01208 Uroporphyrinogen decarboxylase (URO-D) CYCME_RS00340 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CYCME_RS00340 PF07963 Prokaryotic N-terminal methylation motif CYCME_RS00355 PF07963 Prokaryotic N-terminal methylation motif CYCME_RS00365 PF07963 Prokaryotic N-terminal methylation motif CYCME_RS00365 PF00114 Pilin (bacterial filament) CYCME_RS00370 PF00437 Type II/IV secretion system protein CYCME_RS00375 PF00437 Type II/IV secretion system protein CYCME_RS00380 PF01168 Alanine racemase, N-terminal domain CYCME_RS00385 PF03807 NADP oxidoreductase coenzyme F420-dependent CYCME_RS00385 PF14748 Pyrroline-5-carboxylate reductase dimerisation CYCME_RS00390 PF02325 YGGT family CYCME_RS00395 PF00350 Dynamin family CYCME_RS00400 PF02390 Putative methyltransferase CYCME_RS00405 PF05690 Thiazole biosynthesis protein ThiG CYCME_RS00410 PF00793 DAHP synthetase I family CYCME_RS00425 PF00730 HhH-GPD superfamily base excision DNA repair protein CYCME_RS00425 PF00633 Helix-hairpin-helix motif CYCME_RS00425 PF14815 NUDIX domain CYCME_RS00430 PF04362 Bacterial Fe(2+) trafficking CYCME_RS00445 PF11898 Domain of unknown function (DUF3418) CYCME_RS00445 PF00270 DEAD/DEAH box helicase CYCME_RS00445 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CYCME_RS00445 PF04408 Helicase associated domain (HA2) CYCME_RS00445 PF00271 Helicase conserved C-terminal domain CYCME_RS00455 PF04143 Sulphur transport CYCME_RS00465 PF01925 Sulfite exporter TauE/SafE CYCME_RS00470 PF01743 Poly A polymerase head domain CYCME_RS00470 PF12627 Probable RNA and SrmB- binding site of polymerase A CYCME_RS00470 PF01966 HD domain CYCME_RS00485 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CYCME_RS00490 PF02152 Dihydroneopterin aldolase CYCME_RS00495 PF00814 Glycoprotease family CYCME_RS00500 PF01165 Ribosomal protein S21 CYCME_RS00505 PF09424 Yqey-like protein CYCME_RS00510 PF08275 DNA primase catalytic core, N-terminal domain CYCME_RS00510 PF10410 DnaB-helicase binding domain of primase CYCME_RS00510 PF08278 DNA primase DnaG DnaB-binding CYCME_RS00510 PF13662 Toprim domain CYCME_RS00510 PF01807 CHC2 zinc finger CYCME_RS00515 PF04546 Sigma-70, non-essential region CYCME_RS00515 PF04545 Sigma-70, region 4 CYCME_RS00515 PF04539 Sigma-70 region 3 CYCME_RS00515 PF04542 Sigma-70 region 2 CYCME_RS00515 PF00140 Sigma-70 factor, region 1.2 CYCME_RS00515 PF03979 Sigma-70 factor, region 1.1 CYCME_RS00530 PF06969 HemN C-terminal domain CYCME_RS00530 PF04055 Radical SAM superfamily CYCME_RS00535 PF10996 Beta-Casp domain CYCME_RS00535 PF00753 Metallo-beta-lactamase superfamily CYCME_RS00535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CYCME_RS00540 PF01323 DSBA-like thioredoxin domain CYCME_RS00545 PF02798 Glutathione S-transferase, N-terminal domain CYCME_RS00545 PF00043 Glutathione S-transferase, C-terminal domain CYCME_RS00550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS00555 PF00005 ABC transporter CYCME_RS00560 PF02687 FtsX-like permease family CYCME_RS00560 PF12704 MacB-like periplasmic core domain CYCME_RS00560 PF00005 ABC transporter CYCME_RS00565 PF12704 MacB-like periplasmic core domain CYCME_RS00565 PF02687 FtsX-like permease family CYCME_RS00565 PF00005 ABC transporter CYCME_RS00585 PF01758 Sodium Bile acid symporter family CYCME_RS00595 PF09335 SNARE associated Golgi protein CYCME_RS00610 PF01914 MarC family integral membrane protein CYCME_RS00615 PF00958 GMP synthase C terminal domain CYCME_RS00615 PF02540 NAD synthase CYCME_RS00615 PF00117 Glutamine amidotransferase class-I CYCME_RS00645 PF00141 Peroxidase CYCME_RS00650 PF01527 Transposase CYCME_RS00655 PF13333 Integrase core domain CYCME_RS00655 PF13276 HTH-like domain CYCME_RS00655 PF00665 Integrase core domain CYCME_RS00685 PF00684 DnaJ central domain CYCME_RS00685 PF00226 DnaJ domain CYCME_RS00685 PF01556 DnaJ C terminal domain CYCME_RS00690 PF00403 Heavy-metal-associated domain CYCME_RS00695 PF00589 Phage integrase family CYCME_RS00695 PF13495 Phage integrase, N-terminal SAM-like domain CYCME_RS00715 PF01545 Cation efflux family CYCME_RS00715 PF16916 Dimerisation domain of Zinc Transporter CYCME_RS00740 PF00589 Phage integrase family CYCME_RS00740 PF13495 Phage integrase, N-terminal SAM-like domain CYCME_RS00745 PF01497 Periplasmic binding protein CYCME_RS00760 PF16200 C-terminal region of band_7 CYCME_RS00760 PF01145 SPFH domain / Band 7 family CYCME_RS00780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYCME_RS00785 PF02811 PHP domain CYCME_RS00790 PF03544 Gram-negative bacterial TonB protein C-terminal CYCME_RS00795 PF02508 Rnf-Nqr subunit, membrane protein CYCME_RS00800 PF04205 FMN-binding domain CYCME_RS00805 PF03116 NQR2, RnfD, RnfE family CYCME_RS00810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYCME_RS00810 PF12838 4Fe-4S dicluster domain CYCME_RS00810 PF10531 SLBB domain CYCME_RS00810 PF13375 RnfC Barrel sandwich hybrid domain CYCME_RS00815 PF04060 Putative Fe-S cluster CYCME_RS00820 PF02508 Rnf-Nqr subunit, membrane protein CYCME_RS00825 PF01588 Putative tRNA binding domain CYCME_RS00825 PF09334 tRNA synthetases class I (M) CYCME_RS00830 PF10609 NUBPL iron-transfer P-loop NTPase CYCME_RS00835 PF00692 dUTPase CYCME_RS00845 PF00551 Formyl transferase CYCME_RS00850 PF02769 AIR synthase related protein, C-terminal domain CYCME_RS00850 PF00586 AIR synthase related protein, N-terminal domain CYCME_RS00860 PF01066 CDP-alcohol phosphatidyltransferase CYCME_RS00865 PF01594 AI-2E family transporter CYCME_RS00870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYCME_RS00870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYCME_RS00875 PF00924 Mechanosensitive ion channel CYCME_RS00875 PF05552 Conserved TM helix CYCME_RS00885 PF00308 Bacterial dnaA protein CYCME_RS00895 PF03358 NADPH-dependent FMN reductase CYCME_RS00900 PF03960 ArsC family CYCME_RS00905 PF00294 pfkB family carbohydrate kinase CYCME_RS00905 PF01467 Cytidylyltransferase-like CYCME_RS00910 PF01370 NAD dependent epimerase/dehydratase family CYCME_RS00915 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CYCME_RS00925 PF02321 Outer membrane efflux protein CYCME_RS00930 PF02580 D-Tyr-tRNA(Tyr) deacylase CYCME_RS00940 PF00581 Rhodanese-like domain CYCME_RS00945 PF13667 ThiC-associated domain CYCME_RS00945 PF01964 Radical SAM ThiC family CYCME_RS00960 PF13361 UvrD-like helicase C-terminal domain CYCME_RS00960 PF00580 UvrD/REP helicase N-terminal domain CYCME_RS00965 PF00171 Aldehyde dehydrogenase family CYCME_RS00975 PF00248 Aldo/keto reductase family CYCME_RS00995 PF03350 Uncharacterized protein family, UPF0114 CYCME_RS01000 PF03480 Bacterial extracellular solute-binding protein, family 7 CYCME_RS01025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYCME_RS01025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYCME_RS01040 PF03243 Alkylmercury lyase CYCME_RS01040 PF12324 Helix-turn-helix domain of alkylmercury lyase CYCME_RS01045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS01045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYCME_RS01045 PF00403 Heavy-metal-associated domain CYCME_RS01050 PF03203 MerC mercury resistance protein CYCME_RS01055 PF00403 Heavy-metal-associated domain CYCME_RS01060 PF02411 MerT mercuric transport protein CYCME_RS01065 PF00376 MerR family regulatory protein CYCME_RS01065 PF09278 MerR, DNA binding CYCME_RS01070 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CYCME_RS01080 PF08721 TnsA endonuclease C terminal CYCME_RS01080 PF08722 TnsA endonuclease N terminal CYCME_RS01085 PF00665 Integrase core domain CYCME_RS01090 PF13401 AAA domain CYCME_RS01090 PF11426 Tn7 transposition regulator TnsC CYCME_RS01095 PF06527 TniQ CYCME_RS01095 PF15978 Tn7-like transposition protein D CYCME_RS01110 PF07044 Protein of unknown function (DUF1329) CYCME_RS01125 PF00355 Rieske [2Fe-2S] domain CYCME_RS01125 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS01130 PF00561 alpha/beta hydrolase fold CYCME_RS01135 PF00487 Fatty acid desaturase CYCME_RS01140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS01140 PF00355 Rieske [2Fe-2S] domain CYCME_RS01160 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS01160 PF00501 AMP-binding enzyme CYCME_RS01165 PF00109 Beta-ketoacyl synthase, N-terminal domain CYCME_RS01165 PF02801 Beta-ketoacyl synthase, C-terminal domain CYCME_RS01165 PF00550 Phosphopantetheine attachment site CYCME_RS01165 PF00668 Condensation domain CYCME_RS01165 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS01165 PF16197 Ketoacyl-synthetase C-terminal extension CYCME_RS01165 PF00501 AMP-binding enzyme CYCME_RS01165 PF00202 Aminotransferase class-III CYCME_RS01170 PF00534 Glycosyl transferases group 1 CYCME_RS01170 PF13439 Glycosyltransferase Family 4 CYCME_RS01175 PF02666 Phosphatidylserine decarboxylase CYCME_RS01185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYCME_RS01185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYCME_RS01190 PF02562 PhoH-like protein CYCME_RS01195 PF02600 Disulfide bond formation protein DsbB CYCME_RS01205 PF00106 short chain dehydrogenase CYCME_RS01210 PF02525 Flavodoxin-like fold CYCME_RS01215 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS01215 PF00355 Rieske [2Fe-2S] domain CYCME_RS01230 PF00043 Glutathione S-transferase, C-terminal domain CYCME_RS01230 PF13417 Glutathione S-transferase, N-terminal domain CYCME_RS01235 PF00355 Rieske [2Fe-2S] domain CYCME_RS01235 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS01255 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CYCME_RS01260 PF01292 Prokaryotic cytochrome b561 CYCME_RS01270 PF02127 Aminopeptidase I zinc metalloprotease (M18) CYCME_RS01275 PF01641 SelR domain CYCME_RS01285 PF00753 Metallo-beta-lactamase superfamily CYCME_RS01300 PF04191 Phospholipid methyltransferase CYCME_RS01305 PF00438 S-adenosylmethionine synthetase, N-terminal domain CYCME_RS01305 PF02772 S-adenosylmethionine synthetase, central domain CYCME_RS01305 PF02773 S-adenosylmethionine synthetase, C-terminal domain CYCME_RS01310 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CYCME_RS01310 PF05221 S-adenosyl-L-homocysteine hydrolase CYCME_RS01315 PF02219 Methylenetetrahydrofolate reductase CYCME_RS01320 PF05166 YcgL domain CYCME_RS01325 PF04452 RNA methyltransferase CYCME_RS01335 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CYCME_RS01335 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CYCME_RS01345 PF02622 Uncharacterized ACR, COG1678 CYCME_RS01350 PF03652 Holliday junction resolvase CYCME_RS01355 PF00156 Phosphoribosyl transferase domain CYCME_RS01360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYCME_RS01360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYCME_RS01365 PF01979 Amidohydrolase family CYCME_RS01370 PF00970 Oxidoreductase FAD-binding domain CYCME_RS01370 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CYCME_RS01380 PF06962 Putative rRNA methylase CYCME_RS01390 PF09905 DNA-binding protein VF530 CYCME_RS01395 PF12848 ABC transporter CYCME_RS01395 PF00005 ABC transporter CYCME_RS01400 PF00271 Helicase conserved C-terminal domain CYCME_RS01400 PF16124 RecQ zinc-binding CYCME_RS01400 PF09382 RQC domain CYCME_RS01400 PF00270 DEAD/DEAH box helicase CYCME_RS01400 PF00570 HRDC domain CYCME_RS01405 PF00916 Sulfate permease family CYCME_RS01405 PF01740 STAS domain CYCME_RS01420 PF00271 Helicase conserved C-terminal domain CYCME_RS01420 PF03880 DbpA RNA binding domain CYCME_RS01420 PF00270 DEAD/DEAH box helicase CYCME_RS01430 PF01132 Elongation factor P (EF-P) OB domain CYCME_RS01430 PF09285 Elongation factor P, C-terminal CYCME_RS01430 PF08207 Elongation factor P (EF-P) KOW-like domain CYCME_RS01435 PF14743 DNA ligase OB-like domain CYCME_RS01435 PF01068 ATP dependent DNA ligase domain CYCME_RS01440 PF01053 Cys/Met metabolism PLP-dependent enzyme CYCME_RS01445 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CYCME_RS01450 PF00474 Sodium:solute symporter family CYCME_RS01460 PF00939 Sodium:sulfate symporter transmembrane region CYCME_RS01465 PF08448 PAS fold CYCME_RS01465 PF00563 EAL domain CYCME_RS01465 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS01480 PF11842 Domain of unknown function (DUF3362) CYCME_RS01480 PF08497 Radical SAM N-terminal CYCME_RS01480 PF04055 Radical SAM superfamily CYCME_RS01490 PF00902 Sec-independent protein translocase protein (TatC) CYCME_RS01495 PF02416 mttA/Hcf106 family CYCME_RS01500 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CYCME_RS01505 PF01502 Phosphoribosyl-AMP cyclohydrolase CYCME_RS01510 PF00977 Histidine biosynthesis protein CYCME_RS01515 PF00977 Histidine biosynthesis protein CYCME_RS01520 PF00117 Glutamine amidotransferase class-I CYCME_RS01525 PF00475 Imidazoleglycerol-phosphate dehydratase CYCME_RS01535 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CYCME_RS01535 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CYCME_RS01540 PF00679 Elongation factor G C-terminus CYCME_RS01540 PF00009 Elongation factor Tu GTP binding domain CYCME_RS01540 PF03144 Elongation factor Tu domain 2 CYCME_RS01550 PF03848 Tellurite resistance protein TehB CYCME_RS01555 PF02386 Cation transport protein CYCME_RS01560 PF02080 TrkA-C domain CYCME_RS01560 PF02254 TrkA-N domain CYCME_RS01565 PF02954 Bacterial regulatory protein, Fis family CYCME_RS01565 PF00072 Response regulator receiver domain CYCME_RS01565 PF00158 Sigma-54 interaction domain CYCME_RS01570 PF00672 HAMP domain CYCME_RS01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS01570 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS01570 PF00989 PAS fold CYCME_RS01580 PF01029 NusB family CYCME_RS01580 PF01189 16S rRNA methyltransferase RsmB/F CYCME_RS01585 PF02911 Formyl transferase, C-terminal domain CYCME_RS01585 PF00551 Formyl transferase CYCME_RS01590 PF01327 Polypeptide deformylase CYCME_RS01600 PF02481 DNA recombination-mediator protein A CYCME_RS01600 PF17782 DprA winged helix domain CYCME_RS01605 PF04361 Protein of unknown function (DUF494) CYCME_RS01610 PF01131 DNA topoisomerase CYCME_RS01610 PF13368 Topoisomerase C-terminal repeat CYCME_RS01610 PF01751 Toprim domain CYCME_RS01615 PF00731 AIR carboxylase CYCME_RS01620 PF01300 Telomere recombination CYCME_RS01625 PF01218 Coproporphyrinogen III oxidase CYCME_RS01630 PF05494 MlaC protein CYCME_RS01635 PF00490 Delta-aminolevulinic acid dehydratase CYCME_RS01640 PF08501 Shikimate dehydrogenase substrate binding domain CYCME_RS01640 PF01488 Shikimate / quinate 5-dehydrogenase CYCME_RS01640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYCME_RS01645 PF00563 EAL domain CYCME_RS01645 PF08668 HDOD domain CYCME_RS01650 PF00132 Bacterial transferase hexapeptide (six repeats) CYCME_RS01655 PF04011 LemA family CYCME_RS01665 PF01432 Peptidase family M3 CYCME_RS01675 PF01206 Sulfurtransferase TusA CYCME_RS01680 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYCME_RS01695 PF02602 Uroporphyrinogen-III synthase HemD CYCME_RS01700 PF03900 Porphobilinogen deaminase, C-terminal domain CYCME_RS01700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CYCME_RS01705 PF00072 Response regulator receiver domain CYCME_RS01705 PF04397 LytTr DNA-binding domain CYCME_RS01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS01710 PF06580 Histidine kinase CYCME_RS01715 PF00206 Lyase CYCME_RS01715 PF14698 Argininosuccinate lyase C-terminal CYCME_RS01725 PF01295 Adenylate cyclase, class-I CYCME_RS01725 PF12633 Adenylate cyclase NT domain CYCME_RS01730 PF08534 Redoxin CYCME_RS01735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYCME_RS01735 PF03466 LysR substrate binding domain CYCME_RS01740 PF01219 Prokaryotic diacylglycerol kinase CYCME_RS01745 PF00884 Sulfatase CYCME_RS01750 PF02230 Phospholipase/Carboxylesterase CYCME_RS01755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYCME_RS01755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYCME_RS01760 PF01678 Diaminopimelate epimerase CYCME_RS01770 PF02899 Phage integrase, N-terminal SAM-like domain CYCME_RS01770 PF00589 Phage integrase family CYCME_RS01780 PF00227 Proteasome subunit CYCME_RS01785 PF07724 AAA domain (Cdc48 subfamily) CYCME_RS01785 PF00004 ATPase family associated with various cellular activities (AAA) CYCME_RS01795 PF01209 ubiE/COQ5 methyltransferase family CYCME_RS01805 PF03109 ABC1 family CYCME_RS01815 PF01844 HNH endonuclease CYCME_RS01825 PF00866 Ring hydroxylating beta subunit CYCME_RS01830 PF00355 Rieske [2Fe-2S] domain CYCME_RS01830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS01835 PF00456 Transketolase, thiamine diphosphate binding domain CYCME_RS01835 PF02779 Transketolase, pyrimidine binding domain CYCME_RS01835 PF02780 Transketolase, C-terminal domain CYCME_RS01840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYCME_RS01840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYCME_RS01845 PF00162 Phosphoglycerate kinase CYCME_RS01860 PF00487 Fatty acid desaturase CYCME_RS01885 PF00543 Nitrogen regulatory protein P-II CYCME_RS01890 PF00909 Ammonium Transporter Family CYCME_RS01900 PF00679 Elongation factor G C-terminus CYCME_RS01900 PF03764 Elongation factor G, domain IV CYCME_RS01900 PF14492 Elongation Factor G, domain II CYCME_RS01900 PF00009 Elongation factor Tu GTP binding domain CYCME_RS01900 PF03144 Elongation factor Tu domain 2 CYCME_RS01915 PF02146 Sir2 family CYCME_RS01920 PF01645 Conserved region in glutamate synthase CYCME_RS01930 PF01758 Sodium Bile acid symporter family CYCME_RS01935 PF00365 Phosphofructokinase CYCME_RS01950 PF02321 Outer membrane efflux protein CYCME_RS01955 PF00196 Bacterial regulatory proteins, luxR family CYCME_RS01960 PF00529 HlyD membrane-fusion protein of T1SS CYCME_RS01960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS01965 PF00005 ABC transporter CYCME_RS01965 PF00664 ABC transporter transmembrane region CYCME_RS01965 PF03412 Peptidase C39 family CYCME_RS01990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYCME_RS01995 PF00580 UvrD/REP helicase N-terminal domain CYCME_RS01995 PF13361 UvrD-like helicase C-terminal domain CYCME_RS02000 PF13335 Magnesium chelatase, subunit ChlI C-terminal CYCME_RS02000 PF01078 Magnesium chelatase, subunit ChlI CYCME_RS02005 PF04380 Membrane fusogenic activity CYCME_RS02015 PF00543 Nitrogen regulatory protein P-II CYCME_RS02020 PF00909 Ammonium Transporter Family CYCME_RS02025 PF01259 SAICAR synthetase CYCME_RS02030 PF00226 DnaJ domain CYCME_RS02030 PF05099 Tellurite resistance protein TerB CYCME_RS02035 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS02035 PF00563 EAL domain CYCME_RS02035 PF03707 Bacterial signalling protein N terminal repeat CYCME_RS02040 PF04461 Protein of unknown function (DUF520) CYCME_RS02045 PF01618 MotA/TolQ/ExbB proton channel family CYCME_RS02050 PF13677 Membrane MotB of proton-channel complex MotA/MotB CYCME_RS02050 PF00691 OmpA family CYCME_RS02075 PF00834 Ribulose-phosphate 3 epimerase family CYCME_RS02080 PF13419 Haloacid dehalogenase-like hydrolase CYCME_RS02085 PF00425 chorismate binding enzyme CYCME_RS02085 PF04715 Anthranilate synthase component I, N terminal region CYCME_RS02090 PF00117 Glutamine amidotransferase class-I CYCME_RS02095 PF00591 Glycosyl transferase family, a/b domain CYCME_RS02095 PF02885 Glycosyl transferase family, helical bundle domain CYCME_RS02100 PF00218 Indole-3-glycerol phosphate synthase CYCME_RS02105 PF00027 Cyclic nucleotide-binding domain CYCME_RS02105 PF00325 Bacterial regulatory proteins, crp family CYCME_RS02110 PF02566 OsmC-like protein CYCME_RS02120 PF00202 Aminotransferase class-III CYCME_RS02125 PF03232 Ubiquinone biosynthesis protein COQ7 CYCME_RS02135 PF01507 Phosphoadenosine phosphosulfate reductase family CYCME_RS02140 PF00009 Elongation factor Tu GTP binding domain CYCME_RS02155 PF00459 Inositol monophosphatase family CYCME_RS02165 PF16363 GDP-mannose 4,6 dehydratase CYCME_RS02170 PF00483 Nucleotidyl transferase CYCME_RS02180 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CYCME_RS02190 PF01061 ABC-2 type transporter CYCME_RS02195 PF00005 ABC transporter CYCME_RS02210 PF00132 Bacterial transferase hexapeptide (six repeats) CYCME_RS02210 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CYCME_RS02210 PF14602 Hexapeptide repeat of succinyl-transferase CYCME_RS02215 PF05523 WxcM-like, C-terminal CYCME_RS02220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYCME_RS02230 PF05958 tRNA (Uracil-5-)-methyltransferase CYCME_RS02240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYCME_RS02245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYCME_RS02265 PF01757 Acyltransferase family CYCME_RS02270 PF01370 NAD dependent epimerase/dehydratase family CYCME_RS02275 PF02397 Bacterial sugar transferase CYCME_RS02280 PF00483 Nucleotidyl transferase CYCME_RS02285 PF00342 Phosphoglucose isomerase CYCME_RS02290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYCME_RS02290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYCME_RS02290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYCME_RS02295 PF02719 Polysaccharide biosynthesis protein CYCME_RS02300 PF00572 Ribosomal protein L13 CYCME_RS02305 PF00380 Ribosomal protein S9/S16 CYCME_RS02310 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS02315 PF00916 Sulfate permease family CYCME_RS02315 PF01740 STAS domain CYCME_RS02320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CYCME_RS02325 PF01812 5-formyltetrahydrofolate cyclo-ligase family CYCME_RS02330 PF05164 Cell division protein ZapA CYCME_RS02340 PF03695 Uncharacterised protein family (UPF0149) CYCME_RS02345 PF05195 Aminopeptidase P, N-terminal domain CYCME_RS02345 PF00557 Metallopeptidase family M24 CYCME_RS02350 PF01494 FAD binding domain CYCME_RS02355 PF01494 FAD binding domain CYCME_RS02365 PF01571 Aminomethyltransferase folate-binding domain CYCME_RS02365 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYCME_RS02370 PF01597 Glycine cleavage H-protein CYCME_RS02375 PF02347 Glycine cleavage system P-protein CYCME_RS02380 PF08534 Redoxin CYCME_RS02385 PF02347 Glycine cleavage system P-protein CYCME_RS02415 PF08274 PhnA Zinc-Ribbon CYCME_RS02415 PF03831 PhnA domain CYCME_RS02420 PF00472 RF-1 domain CYCME_RS02425 PF03649 Uncharacterised protein family (UPF0014) CYCME_RS02435 PF13509 S1 domain CYCME_RS02435 PF17783 CvfB-like winged helix domain CYCME_RS02450 PF02926 THUMP domain CYCME_RS02450 PF01170 Putative RNA methylase family UPF0020 CYCME_RS02450 PF10672 S-adenosylmethionine-dependent methyltransferase CYCME_RS02460 PF05036 Sporulation related domain CYCME_RS02465 PF05746 DALR anticodon binding domain CYCME_RS02465 PF03485 Arginyl tRNA synthetase N terminal domain CYCME_RS02465 PF00750 tRNA synthetases class I (R) CYCME_RS02470 PF00271 Helicase conserved C-terminal domain CYCME_RS02470 PF00270 DEAD/DEAH box helicase CYCME_RS02470 PF17764 3′ DNA-binding domain (3′BD) CYCME_RS02470 PF18074 Primosomal protein N C-terminal domain CYCME_RS02470 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CYCME_RS02475 PF08281 Sigma-70, region 4 CYCME_RS02475 PF04542 Sigma-70 region 2 CYCME_RS02485 PF00873 AcrB/AcrD/AcrF family CYCME_RS02490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS02505 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CYCME_RS02510 PF09297 NADH pyrophosphatase zinc ribbon domain CYCME_RS02510 PF00293 NUDIX domain CYCME_RS02515 PF00293 NUDIX domain CYCME_RS02520 PF07308 Protein of unknown function (DUF1456) CYCME_RS02525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CYCME_RS02525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYCME_RS02530 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CYCME_RS02530 PF11940 Domain of unknown function (DUF3458) Ig-like fold CYCME_RS02530 PF01433 Peptidase family M1 domain CYCME_RS02535 PF04241 Protein of unknown function (DUF423) CYCME_RS02540 PF00994 Probable molybdopterin binding domain CYCME_RS02545 PF13180 PDZ domain CYCME_RS02545 PF00595 PDZ domain CYCME_RS02565 PF00471 Ribosomal protein L33 CYCME_RS02570 PF00830 Ribosomal L28 family CYCME_RS02575 PF04002 RadC-like JAB domain CYCME_RS02580 PF02441 Flavoprotein CYCME_RS02580 PF04127 DNA / pantothenate metabolism flavoprotein CYCME_RS02585 PF00692 dUTPase CYCME_RS02590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYCME_RS02590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYCME_RS02590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYCME_RS02590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYCME_RS02595 PF00696 Amino acid kinase family CYCME_RS02605 PF00456 Transketolase, thiamine diphosphate binding domain CYCME_RS02605 PF17831 Pyruvate dehydrogenase E1 component middle domain CYCME_RS02610 PF02817 e3 binding domain CYCME_RS02610 PF00364 Biotin-requiring enzyme CYCME_RS02610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYCME_RS02615 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS02615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYCME_RS02620 PF00561 alpha/beta hydrolase fold CYCME_RS02625 PF01389 OmpA-like transmembrane domain CYCME_RS02625 PF00691 OmpA family CYCME_RS02630 PF00764 Arginosuccinate synthase CYCME_RS02640 PF00107 Zinc-binding dehydrogenase CYCME_RS02640 PF08240 Alcohol dehydrogenase GroES-like domain CYCME_RS02645 PF00487 Fatty acid desaturase CYCME_RS02650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYCME_RS02660 PF00107 Zinc-binding dehydrogenase CYCME_RS02660 PF08240 Alcohol dehydrogenase GroES-like domain CYCME_RS02665 PF02581 Thiamine monophosphate synthase CYCME_RS02670 PF08543 Phosphomethylpyrimidine kinase CYCME_RS02675 PF02574 Homocysteine S-methyltransferase CYCME_RS02675 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYCME_RS02675 PF00809 Pterin binding enzyme CYCME_RS02675 PF02310 B12 binding domain CYCME_RS02675 PF02607 B12 binding domain CYCME_RS02685 PF01471 Putative peptidoglycan binding domain CYCME_RS02685 PF13401 AAA domain CYCME_RS02700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYCME_RS02700 PF00437 Type II/IV secretion system protein CYCME_RS02705 PF00482 Type II secretion system (T2SS), protein F CYCME_RS02735 PF00114 Pilin (bacterial filament) CYCME_RS02735 PF07963 Prokaryotic N-terminal methylation motif CYCME_RS02750 PF00551 Formyl transferase CYCME_RS02750 PF01842 ACT domain CYCME_RS02760 PF01967 MoaC family CYCME_RS02765 PF02597 ThiS family CYCME_RS02770 PF02391 MoaE protein CYCME_RS02775 PF00719 Inorganic pyrophosphatase CYCME_RS02780 PF03030 Inorganic H+ pyrophosphatase CYCME_RS02790 PF01645 Conserved region in glutamate synthase CYCME_RS02795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYCME_RS02795 PF00205 Thiamine pyrophosphate enzyme, central domain CYCME_RS02795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYCME_RS02805 PF01790 Prolipoprotein diacylglyceryl transferase CYCME_RS02810 PF00303 Thymidylate synthase CYCME_RS02815 PF00186 Dihydrofolate reductase CYCME_RS02820 PF00149 Calcineurin-like phosphoesterase CYCME_RS02825 PF04379 ApaG domain CYCME_RS02830 PF08245 Mur ligase middle domain CYCME_RS02830 PF02875 Mur ligase family, glutamate ligase domain CYCME_RS02830 PF01225 Mur ligase family, catalytic domain CYCME_RS02845 PF03707 Bacterial signalling protein N terminal repeat CYCME_RS02845 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS02845 PF00563 EAL domain CYCME_RS02850 PF09335 SNARE associated Golgi protein CYCME_RS02860 PF00202 Aminotransferase class-III CYCME_RS02870 PF05114 Protein of unknown function (DUF692) CYCME_RS02880 PF00730 HhH-GPD superfamily base excision DNA repair protein CYCME_RS02880 PF00633 Helix-hairpin-helix motif CYCME_RS02880 PF10576 Iron-sulfur binding domain of endonuclease III CYCME_RS02885 PF13419 Haloacid dehalogenase-like hydrolase CYCME_RS02890 PF00271 Helicase conserved C-terminal domain CYCME_RS02890 PF00270 DEAD/DEAH box helicase CYCME_RS02895 PF00085 Thioredoxin CYCME_RS02900 PF07497 Rho termination factor, RNA-binding domain CYCME_RS02900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYCME_RS02900 PF07498 Rho termination factor, N-terminal domain CYCME_RS02905 PF02844 Phosphoribosylglycinamide synthetase, N domain CYCME_RS02905 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYCME_RS02905 PF02843 Phosphoribosylglycinamide synthetase, C domain CYCME_RS02910 PF02142 MGS-like domain CYCME_RS02910 PF01808 AICARFT/IMPCHase bienzyme CYCME_RS02915 PF02954 Bacterial regulatory protein, Fis family CYCME_RS02920 PF01207 Dihydrouridine synthase (Dus) CYCME_RS02935 PF00289 Biotin carboxylase, N-terminal domain CYCME_RS02935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYCME_RS02935 PF02785 Biotin carboxylase C-terminal domain CYCME_RS02940 PF00364 Biotin-requiring enzyme CYCME_RS02945 PF01220 Dehydroquinase class II CYCME_RS02950 PF00578 AhpC/TSA family CYCME_RS02955 PF02683 Cytochrome C biogenesis protein transmembrane region CYCME_RS02955 PF11412 Disulphide bond corrector protein DsbC CYCME_RS02975 PF00005 ABC transporter CYCME_RS02990 PF06463 Molybdenum Cofactor Synthesis C CYCME_RS02990 PF04055 Radical SAM superfamily CYCME_RS02995 PF13247 4Fe-4S dicluster domain CYCME_RS03005 PF00156 Phosphoribosyl transferase domain CYCME_RS03010 PF06969 HemN C-terminal domain CYCME_RS03010 PF04055 Radical SAM superfamily CYCME_RS03015 PF01725 Ham1 family CYCME_RS03020 PF03725 3' exoribonuclease family, domain 2 CYCME_RS03020 PF01138 3' exoribonuclease family, domain 1 CYCME_RS03025 PF08239 Bacterial SH3 domain CYCME_RS03025 PF00069 Protein kinase domain CYCME_RS03030 PF08340 Domain of unknown function (DUF1732) CYCME_RS03030 PF03755 YicC-like family, N-terminal region CYCME_RS03035 PF00625 Guanylate kinase CYCME_RS03040 PF01192 RNA polymerase Rpb6 CYCME_RS03045 PF13291 ACT domain CYCME_RS03045 PF04607 Region found in RelA / SpoT proteins CYCME_RS03045 PF02824 TGS domain CYCME_RS03050 PF01042 Endoribonuclease L-PSP CYCME_RS03055 PF00271 Helicase conserved C-terminal domain CYCME_RS03055 PF17191 RecG wedge domain CYCME_RS03055 PF00270 DEAD/DEAH box helicase CYCME_RS03060 PF04345 Chorismate lyase CYCME_RS03065 PF01040 UbiA prenyltransferase family CYCME_RS03070 PF00156 Phosphoribosyl transferase domain CYCME_RS03075 PF04055 Radical SAM superfamily CYCME_RS03075 PF06968 Biotin and Thiamin Synthesis associated domain CYCME_RS03080 PF00155 Aminotransferase class I and II CYCME_RS03085 PF00561 alpha/beta hydrolase fold CYCME_RS03090 PF08241 Methyltransferase domain CYCME_RS03100 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYCME_RS03100 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYCME_RS03105 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYCME_RS03110 PF00510 Cytochrome c oxidase subunit III CYCME_RS03130 PF02628 Cytochrome oxidase assembly protein CYCME_RS03135 PF01040 UbiA prenyltransferase family CYCME_RS03145 PF04542 Sigma-70 region 2 CYCME_RS03145 PF00140 Sigma-70 factor, region 1.2 CYCME_RS03145 PF04545 Sigma-70, region 4 CYCME_RS03150 PF18075 FtsX extracellular domain CYCME_RS03155 PF00005 ABC transporter CYCME_RS03160 PF02881 SRP54-type protein, helical bundle domain CYCME_RS03160 PF00448 SRP54-type protein, GTPase domain CYCME_RS03165 PF05193 Peptidase M16 inactive domain CYCME_RS03165 PF00675 Insulinase (Peptidase family M16) CYCME_RS03170 PF05193 Peptidase M16 inactive domain CYCME_RS03180 PF01467 Cytidylyltransferase-like CYCME_RS03185 PF00037 4Fe-4S binding domain CYCME_RS03205 PF07556 Protein of unknown function (DUF1538) CYCME_RS03210 PF07556 Protein of unknown function (DUF1538) CYCME_RS03215 PF06827 Zinc finger found in FPG and IleRS CYCME_RS03215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYCME_RS03215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYCME_RS03235 PF13732 Domain of unknown function (DUF4162) CYCME_RS03235 PF00005 ABC transporter CYCME_RS03240 PF05378 Hydantoinase/oxoprolinase N-terminal region CYCME_RS03240 PF01968 Hydantoinase/oxoprolinase CYCME_RS03250 PF00561 alpha/beta hydrolase fold CYCME_RS03255 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYCME_RS03260 PF03328 HpcH/HpaI aldolase/citrate lyase family CYCME_RS03270 PF00866 Ring hydroxylating beta subunit CYCME_RS03275 PF00355 Rieske [2Fe-2S] domain CYCME_RS03275 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS03280 PF00171 Aldehyde dehydrogenase family CYCME_RS03285 PF02798 Glutathione S-transferase, N-terminal domain CYCME_RS03285 PF00043 Glutathione S-transferase, C-terminal domain CYCME_RS03290 PF06139 BphX-like CYCME_RS03300 PF08448 PAS fold CYCME_RS03300 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS03300 PF00563 EAL domain CYCME_RS03305 PF03710 Glutamate-ammonia ligase adenylyltransferase CYCME_RS03305 PF08335 GlnD PII-uridylyltransferase CYCME_RS03310 PF01063 Amino-transferase class IV CYCME_RS03315 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYCME_RS03320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYCME_RS03335 PF00534 Glycosyl transferases group 1 CYCME_RS03335 PF13439 Glycosyltransferase Family 4 CYCME_RS03355 PF00664 ABC transporter transmembrane region CYCME_RS03355 PF00005 ABC transporter CYCME_RS03360 PF13439 Glycosyltransferase Family 4 CYCME_RS03360 PF00534 Glycosyl transferases group 1 CYCME_RS03380 PF16861 Carbamoyltransferase C-terminus CYCME_RS03380 PF02543 Carbamoyltransferase N-terminus CYCME_RS03400 PF00398 Ribosomal RNA adenine dimethylase CYCME_RS03405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYCME_RS03410 PF00639 PPIC-type PPIASE domain CYCME_RS03410 PF09312 SurA N-terminal domain CYCME_RS03415 PF04453 LPS transport system D CYCME_RS03420 PF01636 Phosphotransferase enzyme family CYCME_RS03425 PF00483 Nucleotidyl transferase CYCME_RS03430 PF04055 Radical SAM superfamily CYCME_RS03435 PF03099 Biotin/lipoate A/B protein ligase family CYCME_RS03440 PF04359 Protein of unknown function (DUF493) CYCME_RS03445 PF01063 Amino-transferase class IV CYCME_RS03450 PF07943 Penicillin-binding protein 5, C-terminal domain CYCME_RS03450 PF00768 D-alanyl-D-alanine carboxypeptidase CYCME_RS03455 PF03330 Lytic transglycolase CYCME_RS03455 PF05036 Sporulation related domain CYCME_RS03460 PF13406 Transglycosylase SLT domain CYCME_RS03465 PF01098 Cell cycle protein CYCME_RS03470 PF03717 Penicillin-binding Protein dimerisation domain CYCME_RS03470 PF00905 Penicillin binding protein transpeptidase domain CYCME_RS03475 PF04093 rod shape-determining protein MreD CYCME_RS03480 PF04085 rod shape-determining protein MreC CYCME_RS03490 PF02686 Glu-tRNAGln amidotransferase C subunit CYCME_RS03495 PF01425 Amidase CYCME_RS03500 PF02934 GatB/GatE catalytic domain CYCME_RS03500 PF02637 GatB domain CYCME_RS03515 PF13847 Methyltransferase domain CYCME_RS03515 PF17827 PrmC N-terminal domain CYCME_RS03520 PF00472 RF-1 domain CYCME_RS03520 PF03462 PCRF domain CYCME_RS03525 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CYCME_RS03525 PF01488 Shikimate / quinate 5-dehydrogenase CYCME_RS03525 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CYCME_RS03535 PF03550 Outer membrane lipoprotein LolB CYCME_RS03540 PF00288 GHMP kinases N terminal domain CYCME_RS03550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYCME_RS03550 PF14572 Phosphoribosyl synthetase-associated domain CYCME_RS03555 PF01386 Ribosomal L25p family CYCME_RS03555 PF14693 Ribosomal protein TL5, C-terminal domain CYCME_RS03560 PF01195 Peptidyl-tRNA hydrolase CYCME_RS03580 PF00009 Elongation factor Tu GTP binding domain CYCME_RS03580 PF03144 Elongation factor Tu domain 2 CYCME_RS03580 PF03143 Elongation factor Tu C-terminal domain CYCME_RS03590 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CYCME_RS03595 PF02357 Transcription termination factor nusG CYCME_RS03595 PF00467 KOW motif CYCME_RS03600 PF00298 Ribosomal protein L11, RNA binding domain CYCME_RS03600 PF03946 Ribosomal protein L11, N-terminal domain CYCME_RS03605 PF00687 Ribosomal protein L1p/L10e family CYCME_RS03610 PF00466 Ribosomal protein L10 CYCME_RS03615 PF16320 Ribosomal protein L7/L12 dimerisation domain CYCME_RS03615 PF00542 Ribosomal protein L7/L12 C-terminal domain CYCME_RS03620 PF04560 RNA polymerase Rpb2, domain 7 CYCME_RS03620 PF10385 RNA polymerase beta subunit external 1 domain CYCME_RS03620 PF04565 RNA polymerase Rpb2, domain 3 CYCME_RS03620 PF04563 RNA polymerase beta subunit CYCME_RS03620 PF04561 RNA polymerase Rpb2, domain 2 CYCME_RS03620 PF00562 RNA polymerase Rpb2, domain 6 CYCME_RS03625 PF05000 RNA polymerase Rpb1, domain 4 CYCME_RS03625 PF04983 RNA polymerase Rpb1, domain 3 CYCME_RS03625 PF00623 RNA polymerase Rpb1, domain 2 CYCME_RS03625 PF04997 RNA polymerase Rpb1, domain 1 CYCME_RS03625 PF04998 RNA polymerase Rpb1, domain 5 CYCME_RS03630 PF00164 Ribosomal protein S12/S23 CYCME_RS03635 PF00177 Ribosomal protein S7p/S5e CYCME_RS03640 PF03144 Elongation factor Tu domain 2 CYCME_RS03640 PF14492 Elongation Factor G, domain II CYCME_RS03640 PF03764 Elongation factor G, domain IV CYCME_RS03640 PF00679 Elongation factor G C-terminus CYCME_RS03640 PF00009 Elongation factor Tu GTP binding domain CYCME_RS03645 PF03143 Elongation factor Tu C-terminal domain CYCME_RS03645 PF03144 Elongation factor Tu domain 2 CYCME_RS03645 PF00009 Elongation factor Tu GTP binding domain CYCME_RS03650 PF00338 Ribosomal protein S10p/S20e CYCME_RS03655 PF00297 Ribosomal protein L3 CYCME_RS03660 PF00573 Ribosomal protein L4/L1 family CYCME_RS03665 PF00276 Ribosomal protein L23 CYCME_RS03670 PF03947 Ribosomal Proteins L2, C-terminal domain CYCME_RS03670 PF00181 Ribosomal Proteins L2, RNA binding domain CYCME_RS03675 PF00203 Ribosomal protein S19 CYCME_RS03680 PF00237 Ribosomal protein L22p/L17e CYCME_RS03685 PF00189 Ribosomal protein S3, C-terminal domain CYCME_RS03685 PF07650 KH domain CYCME_RS03690 PF00252 Ribosomal protein L16p/L10e CYCME_RS03695 PF00831 Ribosomal L29 protein CYCME_RS03700 PF00366 Ribosomal protein S17 CYCME_RS03705 PF00238 Ribosomal protein L14p/L23e CYCME_RS03710 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CYCME_RS03710 PF00467 KOW motif CYCME_RS03715 PF00673 ribosomal L5P family C-terminus CYCME_RS03715 PF00281 Ribosomal protein L5 CYCME_RS03720 PF00253 Ribosomal protein S14p/S29e CYCME_RS03725 PF00410 Ribosomal protein S8 CYCME_RS03730 PF00347 Ribosomal protein L6 CYCME_RS03735 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CYCME_RS03740 PF00333 Ribosomal protein S5, N-terminal domain CYCME_RS03740 PF03719 Ribosomal protein S5, C-terminal domain CYCME_RS03745 PF00327 Ribosomal protein L30p/L7e CYCME_RS03750 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CYCME_RS03755 PF00344 SecY translocase CYCME_RS03760 PF00416 Ribosomal protein S13/S18 CYCME_RS03765 PF00411 Ribosomal protein S11 CYCME_RS03770 PF01479 S4 domain CYCME_RS03770 PF00163 Ribosomal protein S4/S9 N-terminal domain CYCME_RS03775 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYCME_RS03775 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYCME_RS03775 PF01000 RNA polymerase Rpb3/RpoA insert domain CYCME_RS03780 PF01196 Ribosomal protein L17 CYCME_RS03785 PF00037 4Fe-4S binding domain CYCME_RS03785 PF11953 Domain of unknown function (DUF3470) CYCME_RS03790 PF01925 Sulfite exporter TauE/SafE CYCME_RS03795 PF03466 LysR substrate binding domain CYCME_RS03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYCME_RS03800 PF01507 Phosphoadenosine phosphosulfate reductase family CYCME_RS03805 PF04262 Glutamate-cysteine ligase CYCME_RS03810 PF00565 Staphylococcal nuclease homologue CYCME_RS03815 PF00994 Probable molybdopterin binding domain CYCME_RS03815 PF03453 MoeA N-terminal region (domain I and II) CYCME_RS03815 PF03454 MoeA C-terminal region (domain IV) CYCME_RS03820 PF00005 ABC transporter CYCME_RS03825 PF00528 Binding-protein-dependent transport system inner membrane component CYCME_RS03830 PF12849 PBP superfamily domain CYCME_RS03840 PF05088 Bacterial NAD-glutamate dehydrogenase CYCME_RS03845 PF12146 Serine aminopeptidase, S33 CYCME_RS03860 PF00005 ABC transporter CYCME_RS03870 PF04055 Radical SAM superfamily CYCME_RS03870 PF01938 TRAM domain CYCME_RS03870 PF00919 Uncharacterized protein family UPF0004 CYCME_RS03875 PF02562 PhoH-like protein CYCME_RS03880 PF02130 Uncharacterized protein family UPF0054 CYCME_RS03885 PF00571 CBS domain CYCME_RS03885 PF03471 Transporter associated domain CYCME_RS03890 PF00795 Carbon-nitrogen hydrolase CYCME_RS03895 PF00970 Oxidoreductase FAD-binding domain CYCME_RS03895 PF00175 Oxidoreductase NAD-binding domain CYCME_RS03895 PF00111 2Fe-2S iron-sulfur cluster binding domain CYCME_RS03900 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CYCME_RS03910 PF08264 Anticodon-binding domain of tRNA CYCME_RS03910 PF00133 tRNA synthetases class I (I, L, M and V) CYCME_RS03910 PF13603 Leucyl-tRNA synthetase, Domain 2 CYCME_RS03925 PF00171 Aldehyde dehydrogenase family CYCME_RS03930 PF01467 Cytidylyltransferase-like CYCME_RS03940 PF13488 Glycine zipper CYCME_RS03940 PF00691 OmpA family CYCME_RS03945 PF02590 Predicted SPOUT methyltransferase CYCME_RS03950 PF02545 Maf-like protein CYCME_RS03955 PF00575 S1 RNA binding domain CYCME_RS03955 PF10150 Ribonuclease E/G family CYCME_RS03960 PF13116 Protein of unknown function CYCME_RS03960 PF13502 AsmA-like C-terminal region CYCME_RS03965 PF00795 Carbon-nitrogen hydrolase CYCME_RS03970 PF01523 Putative modulator of DNA gyrase CYCME_RS03975 PF01523 Putative modulator of DNA gyrase CYCME_RS03980 PF03448 MgtE intracellular N domain CYCME_RS03980 PF00571 CBS domain CYCME_RS03980 PF01769 Divalent cation transporter CYCME_RS03985 PF03668 P-loop ATPase protein family CYCME_RS03990 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CYCME_RS03995 PF04963 Sigma-54 factor, core binding domain CYCME_RS03995 PF04552 Sigma-54, DNA binding domain CYCME_RS03995 PF00309 Sigma-54 factor, Activator interacting domain (AID) CYCME_RS04000 PF00005 ABC transporter CYCME_RS04000 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYCME_RS04005 PF03968 OstA-like protein CYCME_RS04020 PF00571 CBS domain CYCME_RS04020 PF01380 SIS domain CYCME_RS04025 PF01699 Sodium/calcium exchanger protein CYCME_RS04030 PF00005 ABC transporter CYCME_RS04035 PF02405 Permease MlaE CYCME_RS04040 PF02470 MlaD protein CYCME_RS04050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYCME_RS04055 PF01634 ATP phosphoribosyltransferase CYCME_RS04060 PF00815 Histidinol dehydrogenase CYCME_RS04065 PF00155 Aminotransferase class I and II CYCME_RS04070 PF00355 Rieske [2Fe-2S] domain CYCME_RS04070 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CYCME_RS04075 PF00032 Cytochrome b(C-terminal)/b6/petD CYCME_RS04075 PF00033 Cytochrome b/b6/petB CYCME_RS04080 PF02167 Cytochrome C1 family CYCME_RS04085 PF02798 Glutathione S-transferase, N-terminal domain CYCME_RS04085 PF00043 Glutathione S-transferase, C-terminal domain CYCME_RS04090 PF04386 Stringent starvation protein B CYCME_RS04095 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS04095 PF00501 AMP-binding enzyme CYCME_RS04110 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CYCME_RS04115 PF13520 Amino acid permease CYCME_RS04120 PF07152 YaeQ protein CYCME_RS04125 PF17773 UPF0176 acylphosphatase like domain CYCME_RS04125 PF00581 Rhodanese-like domain CYCME_RS04135 PF00690 Cation transporter/ATPase, N-terminus CYCME_RS04135 PF00689 Cation transporting ATPase, C-terminus CYCME_RS04145 PF00282 Pyridoxal-dependent decarboxylase conserved domain CYCME_RS04150 PF00291 Pyridoxal-phosphate dependent enzyme CYCME_RS04155 PF01136 Peptidase family U32 CYCME_RS04155 PF12392 Collagenase CYCME_RS04165 PF09905 DNA-binding protein VF530 CYCME_RS04200 PF00355 Rieske [2Fe-2S] domain CYCME_RS04205 PF01435 Peptidase family M48 CYCME_RS04210 PF02541 Ppx/GppA phosphatase family CYCME_RS04215 PF02503 Polyphosphate kinase middle domain CYCME_RS04215 PF13090 Polyphosphate kinase C-terminal domain 2 CYCME_RS04215 PF17941 Polyphosphate kinase C-terminal domain 1 CYCME_RS04215 PF13089 Polyphosphate kinase N-terminal domain CYCME_RS04220 PF06977 SdiA-regulated CYCME_RS04235 PF00255 Glutathione peroxidase CYCME_RS04250 PF00005 ABC transporter CYCME_RS04250 PF12848 ABC transporter CYCME_RS04255 PF13607 Succinyl-CoA ligase like flavodoxin domain CYCME_RS04255 PF13380 CoA binding domain CYCME_RS04255 PF00583 Acetyltransferase (GNAT) family CYCME_RS04260 PF00850 Histone deacetylase domain CYCME_RS04265 PF00464 Serine hydroxymethyltransferase CYCME_RS04270 PF03477 ATP cone domain CYCME_RS04275 PF01872 RibD C-terminal domain CYCME_RS04275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYCME_RS04280 PF00677 Lumazine binding domain CYCME_RS04285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CYCME_RS04285 PF00925 GTP cyclohydrolase II CYCME_RS04290 PF00885 6,7-dimethyl-8-ribityllumazine synthase CYCME_RS04295 PF01029 NusB family CYCME_RS04300 PF02769 AIR synthase related protein, C-terminal domain CYCME_RS04300 PF00586 AIR synthase related protein, N-terminal domain CYCME_RS04305 PF04608 Phosphatidylglycerophosphatase A CYCME_RS04315 PF17384 RimP C-terminal SH3 domain CYCME_RS04315 PF02576 RimP N-terminal domain CYCME_RS04320 PF13184 NusA-like KH domain CYCME_RS04320 PF08529 NusA N-terminal domain CYCME_RS04325 PF08364 Bacterial translation initiation factor IF-2 associated region CYCME_RS04325 PF11987 Translation-initiation factor 2 CYCME_RS04325 PF00009 Elongation factor Tu GTP binding domain CYCME_RS04325 PF04760 Translation initiation factor IF-2, N-terminal region CYCME_RS04330 PF02033 Ribosome-binding factor A CYCME_RS04335 PF01509 TruB family pseudouridylate synthase (N terminal domain) CYCME_RS04335 PF16198 tRNA pseudouridylate synthase B C-terminal domain CYCME_RS04335 PF09157 Pseudouridine synthase II TruB, C-terminal CYCME_RS04340 PF00312 Ribosomal protein S15 CYCME_RS04345 PF03725 3' exoribonuclease family, domain 2 CYCME_RS04345 PF00575 S1 RNA binding domain CYCME_RS04345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CYCME_RS04345 PF01138 3' exoribonuclease family, domain 1 CYCME_RS04345 PF00013 KH domain CYCME_RS04350 PF07879 PHB/PHA accumulation regulator DNA-binding domain CYCME_RS04350 PF05233 PHB accumulation regulatory domain CYCME_RS04355 PF01541 GIY-YIG catalytic domain CYCME_RS04355 PF02151 UvrB/uvrC motif CYCME_RS04355 PF08459 UvrC Helix-hairpin-helix N-terminal CYCME_RS04360 PF01066 CDP-alcohol phosphatidyltransferase CYCME_RS04375 PF03971 Monomeric isocitrate dehydrogenase CYCME_RS04385 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS04390 PF00072 Response regulator receiver domain CYCME_RS04395 PF12169 DNA polymerase III subunits gamma and tau domain III CYCME_RS04395 PF12170 DNA polymerase III tau subunit V interacting with alpha CYCME_RS04395 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CYCME_RS04400 PF02575 YbaB/EbfC DNA-binding family CYCME_RS04405 PF13662 Toprim domain CYCME_RS04405 PF02132 RecR protein CYCME_RS04410 PF01230 HIT domain CYCME_RS04415 PF03193 RsgA GTPase CYCME_RS04420 PF01435 Peptidase family M48 CYCME_RS04425 PF00929 Exonuclease CYCME_RS04430 PF08331 Domain of unknown function (DUF1730) CYCME_RS04435 PF03853 YjeF-related protein N-terminus CYCME_RS04435 PF01256 Carbohydrate kinase CYCME_RS04440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CYCME_RS04445 PF11741 AMIN domain CYCME_RS04445 PF01520 N-acetylmuramoyl-L-alanine amidase CYCME_RS04450 PF08676 MutL C terminal dimerisation domain CYCME_RS04450 PF01119 DNA mismatch repair protein, C-terminal domain CYCME_RS04460 PF17209 Hfq protein CYCME_RS04465 PF16360 GTP-binding GTPase Middle Region CYCME_RS04465 PF01926 50S ribosome-binding GTPase CYCME_RS04465 PF13167 GTP-binding GTPase N-terminal CYCME_RS04470 PF12221 Bacterial membrane protein N terminal CYCME_RS04470 PF01145 SPFH domain / Band 7 family CYCME_RS04475 PF01145 SPFH domain / Band 7 family CYCME_RS04485 PF13393 Histidyl-tRNA synthetase CYCME_RS04490 PF00709 Adenylosuccinate synthetase CYCME_RS04495 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS04495 PF00501 AMP-binding enzyme CYCME_RS04500 PF01642 Methylmalonyl-CoA mutase CYCME_RS04500 PF02310 B12 binding domain CYCME_RS04515 PF02154 Flagellar motor switch protein FliM CYCME_RS04515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYCME_RS04520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYCME_RS04525 PF04347 Flagellar biosynthesis protein, FliO CYCME_RS04530 PF00813 FliP family CYCME_RS04535 PF01313 Bacterial export proteins, family 3 CYCME_RS04540 PF01311 Bacterial export proteins, family 1 CYCME_RS04545 PF01312 FlhB HrpN YscU SpaS Family CYCME_RS04550 PF00771 FHIPEP family CYCME_RS04555 PF00448 SRP54-type protein, GTPase domain CYCME_RS04560 PF10609 NUBPL iron-transfer P-loop NTPase CYCME_RS04565 PF04545 Sigma-70, region 4 CYCME_RS04565 PF04542 Sigma-70 region 2 CYCME_RS04565 PF04539 Sigma-70 region 3 CYCME_RS04570 PF01618 MotA/TolQ/ExbB proton channel family CYCME_RS04575 PF13677 Membrane MotB of proton-channel complex MotA/MotB CYCME_RS04575 PF00691 OmpA family CYCME_RS04585 PF01312 FlhB HrpN YscU SpaS Family CYCME_RS04600 PF05175 Methyltransferase small domain CYCME_RS04605 PF01264 Chorismate synthase CYCME_RS04620 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS04620 PF00498 FHA domain CYCME_RS04620 PF00563 EAL domain CYCME_RS04630 PF04055 Radical SAM superfamily CYCME_RS04635 PF01132 Elongation factor P (EF-P) OB domain CYCME_RS04635 PF08207 Elongation factor P (EF-P) KOW-like domain CYCME_RS04635 PF09285 Elongation factor P, C-terminal CYCME_RS04640 PF00152 tRNA synthetases class II (D, K and N) CYCME_RS04645 PF09997 Predicted membrane protein (DUF2238) CYCME_RS04650 PF02666 Phosphatidylserine decarboxylase CYCME_RS04655 PF00266 Aminotransferase class-V CYCME_RS04660 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CYCME_RS04660 PF02896 PEP-utilising enzyme, TIM barrel domain CYCME_RS04660 PF00391 PEP-utilising enzyme, mobile domain CYCME_RS04665 PF03618 Kinase/pyrophosphorylase CYCME_RS04670 PF00271 Helicase conserved C-terminal domain CYCME_RS04670 PF12137 RNA polymerase recycling family C-terminal CYCME_RS04670 PF00176 SNF2 family N-terminal domain CYCME_RS04670 PF18339 RapA N-terminal Tudor like domain 1 CYCME_RS04670 PF18337 RapA N-terminal Tudor like domain CYCME_RS04675 PF03883 Peroxide stress protein YaaA CYCME_RS04680 PF00106 short chain dehydrogenase CYCME_RS04695 PF00561 alpha/beta hydrolase fold CYCME_RS04705 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYCME_RS04710 PF01258 Prokaryotic dksA/traR C4-type zinc finger CYCME_RS04715 PF00155 Aminotransferase class I and II CYCME_RS04720 PF01370 NAD dependent epimerase/dehydratase family CYCME_RS04725 PF00994 Probable molybdopterin binding domain CYCME_RS04725 PF03454 MoeA C-terminal region (domain IV) CYCME_RS04725 PF03453 MoeA N-terminal region (domain I and II) CYCME_RS04730 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CYCME_RS04735 PF03600 Citrate transporter CYCME_RS04740 PF01926 50S ribosome-binding GTPase CYCME_RS04745 PF04102 SlyX CYCME_RS04750 PF00271 Helicase conserved C-terminal domain CYCME_RS04750 PF03880 DbpA RNA binding domain CYCME_RS04750 PF00270 DEAD/DEAH box helicase CYCME_RS04760 PF00682 HMGL-like CYCME_RS04760 PF07836 DmpG-like communication domain CYCME_RS04765 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CYCME_RS04765 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYCME_RS04770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYCME_RS04770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYCME_RS04770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYCME_RS04770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYCME_RS04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS04775 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS04780 PF00072 Response regulator receiver domain CYCME_RS04780 PF00486 Transcriptional regulatory protein, C terminal CYCME_RS04785 PF00873 AcrB/AcrD/AcrF family CYCME_RS04795 PF02321 Outer membrane efflux protein CYCME_RS04800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYCME_RS04800 PF17810 Arginine decarboxylase helical bundle domain CYCME_RS04800 PF17944 Arginine decarboxylase C-terminal helical extension CYCME_RS04805 PF03435 Saccharopine dehydrogenase NADP binding domain CYCME_RS04805 PF16653 Saccharopine dehydrogenase C-terminal domain CYCME_RS04810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYCME_RS04815 PF00491 Arginase family CYCME_RS04830 PF07728 AAA domain (dynein-related subfamily) CYCME_RS04830 PF12102 Domain of unknown function (DUF3578) CYCME_RS04835 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CYCME_RS04835 PF11867 Domain of unknown function (DUF3387) CYCME_RS04835 PF18766 SWI2/SNF2 ATPase CYCME_RS04845 PF01420 Type I restriction modification DNA specificity domain CYCME_RS04850 PF02384 N-6 DNA Methylase CYCME_RS04860 PF01668 SmpB protein CYCME_RS04865 PF00209 Sodium:neurotransmitter symporter family CYCME_RS04870 PF03364 Polyketide cyclase / dehydrase and lipid transport CYCME_RS04875 PF03658 RnfH family Ubiquitin CYCME_RS04880 PF00682 HMGL-like CYCME_RS04880 PF08502 LeuA allosteric (dimerisation) domain CYCME_RS04885 PF00866 Ring hydroxylating beta subunit CYCME_RS04890 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS04890 PF00355 Rieske [2Fe-2S] domain CYCME_RS04905 PF04355 SmpA / OmlA family CYCME_RS04910 PF01475 Ferric uptake regulator family CYCME_RS04915 PF02463 RecF/RecN/SMC N terminal domain CYCME_RS04920 PF01513 ATP-NAD kinase CYCME_RS04925 PF01025 GrpE CYCME_RS04930 PF00012 Hsp70 protein CYCME_RS04935 PF00226 DnaJ domain CYCME_RS04935 PF01556 DnaJ C terminal domain CYCME_RS04935 PF00684 DnaJ central domain CYCME_RS04940 PF01113 Dihydrodipicolinate reductase, N-terminus CYCME_RS04940 PF05173 Dihydrodipicolinate reductase, C-terminus CYCME_RS04945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS04950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CYCME_RS04950 PF00117 Glutamine amidotransferase class-I CYCME_RS04955 PF02142 MGS-like domain CYCME_RS04955 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYCME_RS04955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYCME_RS04960 PF01272 Transcription elongation factor, GreA/GreB, C-term CYCME_RS04960 PF03449 Transcription elongation factor, N-terminal CYCME_RS04965 PF01985 CRS1 / YhbY (CRM) domain CYCME_RS04970 PF01728 FtsJ-like methyltransferase CYCME_RS04975 PF06480 FtsH Extracellular CYCME_RS04975 PF00004 ATPase family associated with various cellular activities (AAA) CYCME_RS04975 PF17862 AAA+ lid domain CYCME_RS04975 PF01434 Peptidase family M41 CYCME_RS04980 PF00809 Pterin binding enzyme CYCME_RS04985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYCME_RS04985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYCME_RS04985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYCME_RS04985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYCME_RS04990 PF00121 Triosephosphate isomerase CYCME_RS04995 PF03840 Preprotein translocase SecG subunit CYCME_RS05010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYCME_RS05010 PF00056 lactate/malate dehydrogenase, NAD binding domain CYCME_RS05015 PF02634 FdhD/NarQ family CYCME_RS05020 PF12804 MobA-like NTP transferase domain CYCME_RS05025 PF12838 4Fe-4S dicluster domain CYCME_RS05025 PF00384 Molybdopterin oxidoreductase CYCME_RS05025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYCME_RS05025 PF01568 Molydopterin dinucleotide binding domain CYCME_RS05025 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CYCME_RS05030 PF10531 SLBB domain CYCME_RS05030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYCME_RS05030 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CYCME_RS05035 PF01293 Phosphoenolpyruvate carboxykinase CYCME_RS05040 PF02649 Type I GTP cyclohydrolase folE2 CYCME_RS05045 PF02779 Transketolase, pyrimidine binding domain CYCME_RS05045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYCME_RS05045 PF02780 Transketolase, C-terminal domain CYCME_RS05050 PF00348 Polyprenyl synthetase CYCME_RS05055 PF02609 Exonuclease VII small subunit CYCME_RS05060 PF02915 Rubrerythrin CYCME_RS05075 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS05075 PF08448 PAS fold CYCME_RS05075 PF00563 EAL domain CYCME_RS05080 PF00986 DNA gyrase B subunit, carboxyl terminus CYCME_RS05080 PF01751 Toprim domain CYCME_RS05080 PF00204 DNA gyrase B CYCME_RS05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS05085 PF00521 DNA gyrase/topoisomerase IV, subunit A CYCME_RS05085 PF03989 DNA gyrase C-terminal domain, beta-propeller CYCME_RS05095 PF00563 EAL domain CYCME_RS05095 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS05095 PF03707 Bacterial signalling protein N terminal repeat CYCME_RS05105 PF00593 TonB dependent receptor CYCME_RS05105 PF07715 TonB-dependent Receptor Plug Domain CYCME_RS05120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYCME_RS05120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYCME_RS05120 PF00205 Thiamine pyrophosphate enzyme, central domain CYCME_RS05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS05125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYCME_RS05130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYCME_RS05130 PF00364 Biotin-requiring enzyme CYCME_RS05130 PF02817 e3 binding domain CYCME_RS05135 PF16078 2-oxoglutarate dehydrogenase N-terminus CYCME_RS05135 PF02779 Transketolase, pyrimidine binding domain CYCME_RS05135 PF00676 Dehydrogenase E1 component CYCME_RS05135 PF16870 2-oxoglutarate dehydrogenase C-terminal CYCME_RS05165 PF00460 Flagella basal body rod protein CYCME_RS05170 PF00460 Flagella basal body rod protein CYCME_RS05170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYCME_RS05175 PF13861 FlgD Tudor-like domain CYCME_RS05175 PF13860 FlgD Ig-like domain CYCME_RS05175 PF03963 Flagellar hook capping protein - N-terminal region CYCME_RS05180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYCME_RS05180 PF07559 Flagellar basal body protein FlaE CYCME_RS05180 PF00460 Flagella basal body rod protein CYCME_RS05185 PF00460 Flagella basal body rod protein CYCME_RS05185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYCME_RS05190 PF00460 Flagella basal body rod protein CYCME_RS05190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYCME_RS05195 PF02107 Flagellar L-ring protein CYCME_RS05200 PF02119 Flagellar P-ring protein CYCME_RS05205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CYCME_RS05205 PF10135 Rod binding protein CYCME_RS05210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYCME_RS05210 PF07196 Flagellin hook IN motif CYCME_RS05215 PF00669 Bacterial flagellin N-terminal helical region CYCME_RS05220 PF00700 Bacterial flagellin C-terminal helical region CYCME_RS05220 PF00669 Bacterial flagellin N-terminal helical region CYCME_RS05225 PF03646 FlaG protein CYCME_RS05230 PF07195 Flagellar hook-associated protein 2 C-terminus CYCME_RS05230 PF02465 Flagellar hook-associated protein 2 N-terminus CYCME_RS05235 PF02561 Flagellar protein FliS CYCME_RS05240 PF05400 Flagellar protein FliT CYCME_RS05260 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYCME_RS05260 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYCME_RS05265 PF05191 Adenylate kinase, active site lid CYCME_RS05280 PF04279 Intracellular septation protein A CYCME_RS05290 PF03969 AFG1-like ATPase CYCME_RS05300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYCME_RS05300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS05305 PF01546 Peptidase family M20/M25/M40 CYCME_RS05305 PF07687 Peptidase dimerisation domain CYCME_RS05310 PF03960 ArsC family CYCME_RS05315 PF00132 Bacterial transferase hexapeptide (six repeats) CYCME_RS05315 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CYCME_RS05315 PF14602 Hexapeptide repeat of succinyl-transferase CYCME_RS05320 PF00155 Aminotransferase class I and II CYCME_RS05335 PF00005 ABC transporter CYCME_RS05340 PF01061 ABC-2 type transporter CYCME_RS05345 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS05350 PF01551 Peptidase family M23 CYCME_RS05350 PF10145 Phage-related minor tail protein CYCME_RS05350 PF01464 Transglycosylase SLT domain CYCME_RS05355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYCME_RS05360 PF02545 Maf-like protein CYCME_RS05370 PF01783 Ribosomal L32p protein family CYCME_RS05375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYCME_RS05375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYCME_RS05380 PF00698 Acyl transferase domain CYCME_RS05390 PF00550 Phosphopantetheine attachment site CYCME_RS05395 PF02801 Beta-ketoacyl synthase, C-terminal domain CYCME_RS05395 PF00109 Beta-ketoacyl synthase, N-terminal domain CYCME_RS05400 PF04715 Anthranilate synthase component I, N terminal region CYCME_RS05400 PF00425 chorismate binding enzyme CYCME_RS05405 PF01063 Amino-transferase class IV CYCME_RS05410 PF02618 YceG-like family CYCME_RS05415 PF02223 Thymidylate kinase CYCME_RS05420 PF09115 DNA polymerase III, delta subunit, C terminal CYCME_RS05430 PF01026 TatD related DNase CYCME_RS05435 PF10609 NUBPL iron-transfer P-loop NTPase CYCME_RS05445 PF00919 Uncharacterized protein family UPF0004 CYCME_RS05445 PF01938 TRAM domain CYCME_RS05445 PF04055 Radical SAM superfamily CYCME_RS05455 PF01648 4'-phosphopantetheinyl transferase superfamily CYCME_RS05460 PF00109 Beta-ketoacyl synthase, N-terminal domain CYCME_RS05460 PF16197 Ketoacyl-synthetase C-terminal extension CYCME_RS05460 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS05460 PF02801 Beta-ketoacyl synthase, C-terminal domain CYCME_RS05460 PF00550 Phosphopantetheine attachment site CYCME_RS05460 PF00202 Aminotransferase class-III CYCME_RS05460 PF00668 Condensation domain CYCME_RS05460 PF00501 AMP-binding enzyme CYCME_RS05470 PF07670 Nucleoside recognition CYCME_RS05475 PF03819 MazG nucleotide pyrophosphohydrolase domain CYCME_RS05480 PF00313 'Cold-shock' DNA-binding domain CYCME_RS05485 PF04551 GcpE protein CYCME_RS05490 PF00266 Aminotransferase class-V CYCME_RS05495 PF03009 Glycerophosphoryl diester phosphodiesterase family CYCME_RS05505 PF01575 MaoC like domain CYCME_RS05515 PF01022 Bacterial regulatory protein, arsR family CYCME_RS05520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYCME_RS05520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYCME_RS05540 PF01638 HxlR-like helix-turn-helix CYCME_RS05545 PF03358 NADPH-dependent FMN reductase CYCME_RS05580 PF00561 alpha/beta hydrolase fold CYCME_RS05580 PF08386 TAP-like protein CYCME_RS05620 PF00672 HAMP domain CYCME_RS05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS05620 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS05625 PF00072 Response regulator receiver domain CYCME_RS05625 PF00486 Transcriptional regulatory protein, C terminal CYCME_RS05645 PF00355 Rieske [2Fe-2S] domain CYCME_RS05645 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS05680 PF02547 Queuosine biosynthesis protein CYCME_RS05685 PF01702 Queuine tRNA-ribosyltransferase CYCME_RS05690 PF02699 Preprotein translocase subunit CYCME_RS05695 PF13721 SecD export protein N-terminal TM region CYCME_RS05695 PF07549 SecD/SecF GG Motif CYCME_RS05695 PF02355 Protein export membrane protein CYCME_RS05700 PF02355 Protein export membrane protein CYCME_RS05700 PF07549 SecD/SecF GG Motif CYCME_RS05705 PF00459 Inositol monophosphatase family CYCME_RS05710 PF00588 SpoU rRNA Methylase family CYCME_RS05715 PF00132 Bacterial transferase hexapeptide (six repeats) CYCME_RS05720 PF00266 Aminotransferase class-V CYCME_RS05725 PF00106 short chain dehydrogenase CYCME_RS05730 PF02646 RmuC family CYCME_RS05735 PF13419 Haloacid dehalogenase-like hydrolase CYCME_RS05745 PF01979 Amidohydrolase family CYCME_RS05750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYCME_RS05760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYCME_RS05760 PF02403 Seryl-tRNA synthetase N-terminal domain CYCME_RS05765 PF01027 Inhibitor of apoptosis-promoting Bax1 CYCME_RS05775 PF00672 HAMP domain CYCME_RS05775 PF00909 Ammonium Transporter Family CYCME_RS05780 PF02515 CoA-transferase family III CYCME_RS05785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS05785 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS05785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS05790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS05790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS05790 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS05795 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS05795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS05795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS05800 PF00378 Enoyl-CoA hydratase/isomerase CYCME_RS05805 PF00106 short chain dehydrogenase CYCME_RS05810 PF01613 Flavin reductase like domain CYCME_RS05820 PF00004 ATPase family associated with various cellular activities (AAA) CYCME_RS05820 PF07724 AAA domain (Cdc48 subfamily) CYCME_RS05820 PF17871 AAA lid domain CYCME_RS05820 PF02861 Clp amino terminal domain, pathogenicity island component CYCME_RS05820 PF10431 C-terminal, D2-small domain, of ClpB protein CYCME_RS05825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS05825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS05825 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS05835 PF01144 Coenzyme A transferase CYCME_RS05840 PF01144 Coenzyme A transferase CYCME_RS05845 PF00682 HMGL-like CYCME_RS05850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYCME_RS05850 PF02785 Biotin carboxylase C-terminal domain CYCME_RS05850 PF00289 Biotin carboxylase, N-terminal domain CYCME_RS05850 PF00364 Biotin-requiring enzyme CYCME_RS05855 PF01039 Carboxyl transferase domain CYCME_RS05860 PF00108 Thiolase, N-terminal domain CYCME_RS05860 PF02803 Thiolase, C-terminal domain CYCME_RS05865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS05865 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS05865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS05870 PF08361 MAATS-type transcriptional repressor, C-terminal region CYCME_RS05870 PF00440 Bacterial regulatory proteins, tetR family CYCME_RS05875 PF00378 Enoyl-CoA hydratase/isomerase CYCME_RS05880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS05880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS05880 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS05885 PF01575 MaoC like domain CYCME_RS05890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CYCME_RS05890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CYCME_RS05895 PF00378 Enoyl-CoA hydratase/isomerase CYCME_RS05900 PF13380 CoA binding domain CYCME_RS05900 PF13607 Succinyl-CoA ligase like flavodoxin domain CYCME_RS05905 PF00171 Aldehyde dehydrogenase family CYCME_RS05915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS05915 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS05915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS05920 PF01039 Carboxyl transferase domain CYCME_RS05925 PF00378 Enoyl-CoA hydratase/isomerase CYCME_RS05930 PF00289 Biotin carboxylase, N-terminal domain CYCME_RS05930 PF00364 Biotin-requiring enzyme CYCME_RS05930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYCME_RS05930 PF02785 Biotin carboxylase C-terminal domain CYCME_RS05940 PF00108 Thiolase, N-terminal domain CYCME_RS05940 PF02803 Thiolase, C-terminal domain CYCME_RS05945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYCME_RS05945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS05950 PF03328 HpcH/HpaI aldolase/citrate lyase family CYCME_RS05955 PF01575 MaoC like domain CYCME_RS05975 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS05975 PF00501 AMP-binding enzyme CYCME_RS05980 PF00108 Thiolase, N-terminal domain CYCME_RS05980 PF02803 Thiolase, C-terminal domain CYCME_RS05985 PF00106 short chain dehydrogenase CYCME_RS05990 PF00378 Enoyl-CoA hydratase/isomerase CYCME_RS06000 PF02515 CoA-transferase family III CYCME_RS06015 PF00881 Nitroreductase family CYCME_RS06020 PF01012 Electron transfer flavoprotein domain CYCME_RS06025 PF01012 Electron transfer flavoprotein domain CYCME_RS06025 PF00766 Electron transfer flavoprotein FAD-binding domain CYCME_RS06035 PF00440 Bacterial regulatory proteins, tetR family CYCME_RS06035 PF18665 Tetracyclin repressor-like, C-terminal domain CYCME_RS06045 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS06045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS06045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS06050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS06050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS06050 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS06065 PF01575 MaoC like domain CYCME_RS06075 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS06075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS06075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS06085 PF02515 CoA-transferase family III CYCME_RS06090 PF02803 Thiolase, C-terminal domain CYCME_RS06090 PF00108 Thiolase, N-terminal domain CYCME_RS06105 PF12111 Polyribonucleotide phosphorylase C terminal CYCME_RS06105 PF10150 Ribonuclease E/G family CYCME_RS06105 PF00575 S1 RNA binding domain CYCME_RS06110 PF00849 RNA pseudouridylate synthase CYCME_RS06110 PF01479 S4 domain CYCME_RS06115 PF13419 Haloacid dehalogenase-like hydrolase CYCME_RS06120 PF01343 Peptidase family S49 CYCME_RS06130 PF00072 Response regulator receiver domain CYCME_RS06130 PF00486 Transcriptional regulatory protein, C terminal CYCME_RS06135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS06150 PF08328 Adenylosuccinate lyase C-terminal CYCME_RS06150 PF00206 Lyase CYCME_RS06160 PF00293 NUDIX domain CYCME_RS06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYCME_RS06165 PF03466 LysR substrate binding domain CYCME_RS06170 PF01274 Malate synthase CYCME_RS06175 PF00463 Isocitrate lyase family CYCME_RS06185 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYCME_RS06190 PF10431 C-terminal, D2-small domain, of ClpB protein CYCME_RS06190 PF00004 ATPase family associated with various cellular activities (AAA) CYCME_RS06190 PF02861 Clp amino terminal domain, pathogenicity island component CYCME_RS06190 PF07724 AAA domain (Cdc48 subfamily) CYCME_RS06190 PF17871 AAA lid domain CYCME_RS06195 PF01176 Translation initiation factor 1A / IF-1 CYCME_RS06200 PF04377 Arginine-tRNA-protein transferase, C terminus CYCME_RS06200 PF04376 Arginine-tRNA-protein transferase, N terminus CYCME_RS06205 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CYCME_RS06210 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS06215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYCME_RS06215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYCME_RS06220 PF00701 Dihydrodipicolinate synthetase family CYCME_RS06225 PF03600 Citrate transporter CYCME_RS06255 PF13683 Integrase core domain CYCME_RS06255 PF13276 HTH-like domain CYCME_RS06260 PF01527 Transposase CYCME_RS06295 PF03239 Iron permease FTR1 family CYCME_RS06305 PF05275 Copper resistance protein B precursor (CopB) CYCME_RS06330 PF00871 Acetokinase family CYCME_RS06340 PF09364 XFP N-terminal domain CYCME_RS06340 PF09363 XFP C-terminal domain CYCME_RS06340 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CYCME_RS06370 PF00873 AcrB/AcrD/AcrF family CYCME_RS06375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS06440 PF00403 Heavy-metal-associated domain CYCME_RS06445 PF00376 MerR family regulatory protein CYCME_RS06445 PF09278 MerR, DNA binding CYCME_RS06455 PF00873 AcrB/AcrD/AcrF family CYCME_RS06460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS06500 PF00873 AcrB/AcrD/AcrF family CYCME_RS06505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS06525 PF02583 Metal-sensitive transcriptional repressor CYCME_RS06530 PF01545 Cation efflux family CYCME_RS06535 PF03239 Iron permease FTR1 family CYCME_RS06540 PF01526 Tn3 transposase DDE domain CYCME_RS06540 PF13700 Domain of unknown function (DUF4158) CYCME_RS06545 PF00239 Resolvase, N terminal domain CYCME_RS06545 PF02796 Helix-turn-helix domain of resolvase CYCME_RS06550 PF02583 Metal-sensitive transcriptional repressor CYCME_RS06555 PF00394 Multicopper oxidase CYCME_RS06555 PF07732 Multicopper oxidase CYCME_RS06555 PF07731 Multicopper oxidase CYCME_RS06560 PF05275 Copper resistance protein B precursor (CopB) CYCME_RS06580 PF00873 AcrB/AcrD/AcrF family CYCME_RS06585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS06620 PF13411 MerR HTH family regulatory protein CYCME_RS06635 PF05275 Copper resistance protein B precursor (CopB) CYCME_RS06640 PF00394 Multicopper oxidase CYCME_RS06640 PF07732 Multicopper oxidase CYCME_RS06640 PF07731 Multicopper oxidase CYCME_RS06670 PF13700 Domain of unknown function (DUF4158) CYCME_RS06670 PF01526 Tn3 transposase DDE domain CYCME_RS06690 PF01502 Phosphoribosyl-AMP cyclohydrolase CYCME_RS06695 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYCME_RS06695 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYCME_RS06705 PF12704 MacB-like periplasmic core domain CYCME_RS06705 PF00005 ABC transporter CYCME_RS06705 PF02687 FtsX-like permease family CYCME_RS06715 PF11798 IMS family HHH motif CYCME_RS06715 PF11799 impB/mucB/samB family C-terminal domain CYCME_RS06715 PF00817 impB/mucB/samB family CYCME_RS06715 PF13438 Domain of unknown function (DUF4113) CYCME_RS06720 PF00717 Peptidase S24-like CYCME_RS06725 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYCME_RS06735 PF01497 Periplasmic binding protein CYCME_RS06740 PF01032 FecCD transport family CYCME_RS06745 PF00005 ABC transporter CYCME_RS06750 PF00593 TonB dependent receptor CYCME_RS06750 PF07715 TonB-dependent Receptor Plug Domain CYCME_RS06755 PF00072 Response regulator receiver domain CYCME_RS06755 PF00196 Bacterial regulatory proteins, luxR family CYCME_RS06765 PF00563 EAL domain CYCME_RS06765 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS06765 PF03707 Bacterial signalling protein N terminal repeat CYCME_RS06770 PF00072 Response regulator receiver domain CYCME_RS06770 PF00196 Bacterial regulatory proteins, luxR family CYCME_RS06775 PF00360 Phytochrome region CYCME_RS06775 PF08446 PAS fold CYCME_RS06775 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS06775 PF01590 GAF domain CYCME_RS06780 PF18030 RimK PreATP-grasp domain CYCME_RS06780 PF08443 RimK-like ATP-grasp domain CYCME_RS06790 PF18030 RimK PreATP-grasp domain CYCME_RS06790 PF08443 RimK-like ATP-grasp domain CYCME_RS06800 PF13617 YnbE-like lipoprotein CYCME_RS06810 PF16363 GDP-mannose 4,6 dehydratase CYCME_RS06815 PF04321 RmlD substrate binding domain CYCME_RS06820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CYCME_RS06825 PF00483 Nucleotidyl transferase CYCME_RS06855 PF00534 Glycosyl transferases group 1 CYCME_RS06860 PF00535 Glycosyl transferase family 2 CYCME_RS06865 PF01757 Acyltransferase family CYCME_RS06870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYCME_RS06870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYCME_RS06870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYCME_RS06890 PF00534 Glycosyl transferases group 1 CYCME_RS06890 PF00535 Glycosyl transferase family 2 CYCME_RS06895 PF01370 NAD dependent epimerase/dehydratase family CYCME_RS06935 PF01370 NAD dependent epimerase/dehydratase family CYCME_RS06940 PF01757 Acyltransferase family CYCME_RS06975 PF00665 Integrase core domain CYCME_RS06975 PF13276 HTH-like domain CYCME_RS06975 PF13333 Integrase core domain CYCME_RS06990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYCME_RS06990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYCME_RS06995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYCME_RS06995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYCME_RS07015 PF00535 Glycosyl transferase family 2 CYCME_RS07030 PF00534 Glycosyl transferases group 1 CYCME_RS07030 PF13439 Glycosyltransferase Family 4 CYCME_RS07035 PF13439 Glycosyltransferase Family 4 CYCME_RS07035 PF00534 Glycosyl transferases group 1 CYCME_RS07040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYCME_RS07040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYCME_RS07060 PF12804 MobA-like NTP transferase domain CYCME_RS07060 PF14602 Hexapeptide repeat of succinyl-transferase CYCME_RS07060 PF00132 Bacterial transferase hexapeptide (six repeats) CYCME_RS07065 PF00534 Glycosyl transferases group 1 CYCME_RS07070 PF00535 Glycosyl transferase family 2 CYCME_RS07075 PF14667 Polysaccharide biosynthesis C-terminal domain CYCME_RS07095 PF01527 Transposase CYCME_RS07100 PF13276 HTH-like domain CYCME_RS07100 PF13683 Integrase core domain CYCME_RS07105 PF01527 Transposase CYCME_RS07115 PF01527 Transposase CYCME_RS07120 PF13276 HTH-like domain CYCME_RS07120 PF13683 Integrase core domain CYCME_RS07125 PF01527 Transposase CYCME_RS07135 PF01527 Transposase CYCME_RS07140 PF13683 Integrase core domain CYCME_RS07140 PF13276 HTH-like domain CYCME_RS07145 PF01471 Putative peptidoglycan binding domain CYCME_RS07145 PF13401 AAA domain CYCME_RS07175 PF02397 Bacterial sugar transferase CYCME_RS07180 PF01050 Mannose-6-phosphate isomerase CYCME_RS07180 PF00483 Nucleotidyl transferase CYCME_RS07185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYCME_RS07185 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CYCME_RS07195 PF12002 MgsA AAA+ ATPase C terminal CYCME_RS07195 PF16193 AAA C-terminal domain CYCME_RS07195 PF00004 ATPase family associated with various cellular activities (AAA) CYCME_RS07200 PF03548 Outer membrane lipoprotein carrier protein LolA CYCME_RS07205 PF17854 FtsK alpha domain CYCME_RS07205 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CYCME_RS07205 PF09397 Ftsk gamma domain CYCME_RS07205 PF01580 FtsK/SpoIIIE family CYCME_RS07210 PF04445 Putative SAM-dependent methyltransferase CYCME_RS07230 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYCME_RS07230 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYCME_RS07235 PF01406 tRNA synthetases class I (C) catalytic domain CYCME_RS07235 PF09190 DALR domain CYCME_RS07240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYCME_RS07245 PF00149 Calcineurin-like phosphoesterase CYCME_RS07250 PF04305 Protein of unknown function (DUF455) CYCME_RS07255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS07255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYCME_RS07270 PF03861 ANTAR domain CYCME_RS07270 PF08376 Nitrate and nitrite sensing CYCME_RS07275 PF00005 ABC transporter CYCME_RS07280 PF00528 Binding-protein-dependent transport system inner membrane component CYCME_RS07285 PF00005 ABC transporter CYCME_RS07290 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS07290 PF03707 Bacterial signalling protein N terminal repeat CYCME_RS07290 PF00563 EAL domain CYCME_RS07300 PF00330 Aconitase family (aconitate hydratase) CYCME_RS07300 PF06434 Aconitate hydratase 2 N-terminus CYCME_RS07300 PF11791 Aconitate B N-terminal domain CYCME_RS07310 PF01709 Transcriptional regulator CYCME_RS07315 PF01053 Cys/Met metabolism PLP-dependent enzyme CYCME_RS07320 PF00156 Phosphoribosyl transferase domain CYCME_RS07325 PF02674 Colicin V production protein CYCME_RS07335 PF02875 Mur ligase family, glutamate ligase domain CYCME_RS07335 PF08245 Mur ligase middle domain CYCME_RS07340 PF17848 Acetyl-coA carboxylase zinc finger domain CYCME_RS07340 PF01039 Carboxyl transferase domain CYCME_RS07345 PF00290 Tryptophan synthase alpha chain CYCME_RS07350 PF00291 Pyridoxal-phosphate dependent enzyme CYCME_RS07355 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CYCME_RS07360 PF01416 tRNA pseudouridine synthase CYCME_RS07365 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CYCME_RS07370 PF02565 Recombination protein O C terminal CYCME_RS07370 PF11967 Recombination protein O N terminal CYCME_RS07375 PF07650 KH domain CYCME_RS07375 PF01926 50S ribosome-binding GTPase CYCME_RS07380 PF14622 Ribonuclease-III-like CYCME_RS07380 PF00035 Double-stranded RNA binding motif CYCME_RS07390 PF10502 Signal peptidase, peptidase S26 CYCME_RS07395 PF00679 Elongation factor G C-terminus CYCME_RS07395 PF00009 Elongation factor Tu GTP binding domain CYCME_RS07395 PF06421 GTP-binding protein LepA C-terminus CYCME_RS07400 PF13180 PDZ domain CYCME_RS07400 PF17820 PDZ domain CYCME_RS07415 PF04542 Sigma-70 region 2 CYCME_RS07415 PF08281 Sigma-70, region 4 CYCME_RS07420 PF00890 FAD binding domain CYCME_RS07420 PF02910 Fumarate reductase flavoprotein C-term CYCME_RS07430 PF03937 Flavinator of succinate dehydrogenase CYCME_RS07435 PF13237 4Fe-4S dicluster domain CYCME_RS07435 PF13085 2Fe-2S iron-sulfur cluster binding domain CYCME_RS07440 PF02910 Fumarate reductase flavoprotein C-term CYCME_RS07440 PF00890 FAD binding domain CYCME_RS07450 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CYCME_RS07460 PF02630 SCO1/SenC CYCME_RS07475 PF01336 OB-fold nucleic acid binding domain CYCME_RS07475 PF00152 tRNA synthetases class II (D, K and N) CYCME_RS07480 PF00472 RF-1 domain CYCME_RS07480 PF03462 PCRF domain CYCME_RS07485 PF01592 NifU-like N terminal domain CYCME_RS07490 PF00266 Aminotransferase class-V CYCME_RS07495 PF01458 Uncharacterized protein family (UPF0051) CYCME_RS07500 PF00005 ABC transporter CYCME_RS07505 PF01458 Uncharacterized protein family (UPF0051) CYCME_RS07525 PF01329 Pterin 4 alpha carbinolamine dehydratase CYCME_RS07530 PF17768 RecJ OB domain CYCME_RS07530 PF02272 DHHA1 domain CYCME_RS07530 PF01368 DHH family CYCME_RS07535 PF00291 Pyridoxal-phosphate dependent enzyme CYCME_RS07540 PF01842 ACT domain CYCME_RS07540 PF00742 Homoserine dehydrogenase CYCME_RS07540 PF03447 Homoserine dehydrogenase, NAD binding domain CYCME_RS07545 PF00155 Aminotransferase class I and II CYCME_RS07550 PF04542 Sigma-70 region 2 CYCME_RS07550 PF00140 Sigma-70 factor, region 1.2 CYCME_RS07550 PF04539 Sigma-70 region 3 CYCME_RS07550 PF04545 Sigma-70, region 4 CYCME_RS07555 PF01476 LysM domain CYCME_RS07555 PF01551 Peptidase family M23 CYCME_RS07560 PF09335 SNARE associated Golgi protein CYCME_RS07570 PF01975 Survival protein SurE CYCME_RS07580 PF02673 Bacitracin resistance protein BacA CYCME_RS07585 PF01142 tRNA pseudouridine synthase D (TruD) CYCME_RS07590 PF02542 YgbB family CYCME_RS07595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CYCME_RS07600 PF04977 Septum formation initiator CYCME_RS07605 PF00113 Enolase, C-terminal TIM barrel domain CYCME_RS07605 PF03952 Enolase, N-terminal domain CYCME_RS07610 PF00793 DAHP synthetase I family CYCME_RS07615 PF00117 Glutamine amidotransferase class-I CYCME_RS07615 PF06418 CTP synthase N-terminus CYCME_RS07620 PF09179 TilS substrate binding domain CYCME_RS07620 PF11734 TilS substrate C-terminal domain CYCME_RS07620 PF01171 PP-loop family CYCME_RS07625 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CYCME_RS07630 PF02811 PHP domain CYCME_RS07630 PF14579 Helix-hairpin-helix motif CYCME_RS07630 PF01336 OB-fold nucleic acid binding domain CYCME_RS07630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYCME_RS07630 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYCME_RS07635 PF01351 Ribonuclease HII CYCME_RS07640 PF02684 Lipid-A-disaccharide synthetase CYCME_RS07645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CYCME_RS07645 PF00132 Bacterial transferase hexapeptide (six repeats) CYCME_RS07650 PF07977 FabA-like domain CYCME_RS07655 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CYCME_RS07655 PF00132 Bacterial transferase hexapeptide (six repeats) CYCME_RS07665 PF01103 Surface antigen CYCME_RS07665 PF07244 Surface antigen variable number repeat CYCME_RS07670 PF17820 PDZ domain CYCME_RS07670 PF02163 Peptidase family M50 CYCME_RS07675 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYCME_RS07675 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CYCME_RS07675 PF13288 DXP reductoisomerase C-terminal domain CYCME_RS07685 PF01255 Putative undecaprenyl diphosphate synthase CYCME_RS07690 PF01765 Ribosome recycling factor CYCME_RS07695 PF00696 Amino acid kinase family CYCME_RS07700 PF00889 Elongation factor TS CYCME_RS07705 PF00318 Ribosomal protein S2 CYCME_RS07710 PF00557 Metallopeptidase family M24 CYCME_RS07715 PF08335 GlnD PII-uridylyltransferase CYCME_RS07715 PF01842 ACT domain CYCME_RS07715 PF01966 HD domain CYCME_RS07715 PF01909 Nucleotidyltransferase domain CYCME_RS07730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYCME_RS07730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS07735 PF12705 PD-(D/E)XK nuclease superfamily CYCME_RS07735 PF00580 UvrD/REP helicase N-terminal domain CYCME_RS07735 PF13361 UvrD-like helicase C-terminal domain CYCME_RS07740 PF12705 PD-(D/E)XK nuclease superfamily CYCME_RS07745 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS07765 PF00743 Flavin-binding monooxygenase-like CYCME_RS07770 PF07859 alpha/beta hydrolase fold CYCME_RS07775 PF00296 Luciferase-like monooxygenase CYCME_RS07785 PF13519 von Willebrand factor type A domain CYCME_RS07800 PF01882 Protein of unknown function DUF58 CYCME_RS07805 PF07726 ATPase family associated with various cellular activities (AAA) CYCME_RS07805 PF17863 AAA lid domain CYCME_RS07825 PF13847 Methyltransferase domain CYCME_RS07830 PF01810 LysE type translocator CYCME_RS07835 PF13091 PLD-like domain CYCME_RS07835 PF13396 Phospholipase_D-nuclease N-terminal CYCME_RS07840 PF00293 NUDIX domain CYCME_RS07855 PF00085 Thioredoxin CYCME_RS07865 PF00027 Cyclic nucleotide-binding domain CYCME_RS07865 PF00325 Bacterial regulatory proteins, crp family CYCME_RS07870 PF00866 Ring hydroxylating beta subunit CYCME_RS07875 PF00355 Rieske [2Fe-2S] domain CYCME_RS07875 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS07880 PF03063 Prismane/CO dehydrogenase family CYCME_RS07885 PF00027 Cyclic nucleotide-binding domain CYCME_RS07885 PF13545 Crp-like helix-turn-helix domain CYCME_RS07890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYCME_RS07890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYCME_RS07910 PF00355 Rieske [2Fe-2S] domain CYCME_RS07915 PF12697 Alpha/beta hydrolase family CYCME_RS07920 PF00355 Rieske [2Fe-2S] domain CYCME_RS07920 PF11723 Homotrimeric ring hydroxylase CYCME_RS07940 PF00355 Rieske [2Fe-2S] domain CYCME_RS07940 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS07945 PF00355 Rieske [2Fe-2S] domain CYCME_RS07945 PF11723 Homotrimeric ring hydroxylase CYCME_RS07950 PF00866 Ring hydroxylating beta subunit CYCME_RS07955 PF12697 Alpha/beta hydrolase family CYCME_RS07960 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS07960 PF00355 Rieske [2Fe-2S] domain CYCME_RS07965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYCME_RS07975 PF00873 AcrB/AcrD/AcrF family CYCME_RS07980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS07990 PF11799 impB/mucB/samB family C-terminal domain CYCME_RS07990 PF00817 impB/mucB/samB family CYCME_RS08005 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYCME_RS08010 PF00929 Exonuclease CYCME_RS08015 PF00075 RNase H CYCME_RS08020 PF08241 Methyltransferase domain CYCME_RS08025 PF01476 LysM domain CYCME_RS08025 PF01464 Transglycosylase SLT domain CYCME_RS08030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYCME_RS08030 PF00005 ABC transporter CYCME_RS08040 PF12911 N-terminal TM domain of oligopeptide transport permease C CYCME_RS08040 PF00528 Binding-protein-dependent transport system inner membrane component CYCME_RS08045 PF00528 Binding-protein-dependent transport system inner membrane component CYCME_RS08050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYCME_RS08055 PF00375 Sodium:dicarboxylate symporter family CYCME_RS08060 PF13145 PPIC-type PPIASE domain CYCME_RS08075 PF00216 Bacterial DNA-binding protein CYCME_RS08080 PF05362 Lon protease (S16) C-terminal proteolytic domain CYCME_RS08080 PF00004 ATPase family associated with various cellular activities (AAA) CYCME_RS08080 PF02190 ATP-dependent protease La (LON) substrate-binding domain CYCME_RS08085 PF07724 AAA domain (Cdc48 subfamily) CYCME_RS08085 PF10431 C-terminal, D2-small domain, of ClpB protein CYCME_RS08085 PF06689 ClpX C4-type zinc finger CYCME_RS08090 PF00574 Clp protease CYCME_RS08095 PF05697 Bacterial trigger factor protein (TF) CYCME_RS08095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYCME_RS08095 PF05698 Bacterial trigger factor protein (TF) C-terminus CYCME_RS08115 PF02421 Ferrous iron transport protein B CYCME_RS08115 PF07670 Nucleoside recognition CYCME_RS08115 PF17910 FeoB cytosolic helical domain CYCME_RS08115 PF07664 Ferrous iron transport protein B C terminus CYCME_RS08125 PF17820 PDZ domain CYCME_RS08125 PF13180 PDZ domain CYCME_RS08130 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS08130 PF00355 Rieske [2Fe-2S] domain CYCME_RS08135 PF00866 Ring hydroxylating beta subunit CYCME_RS08140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYCME_RS08145 PF01209 ubiE/COQ5 methyltransferase family CYCME_RS08150 PF01734 Patatin-like phospholipase CYCME_RS08160 PF03806 AbgT putative transporter family CYCME_RS08180 PF00892 EamA-like transporter family CYCME_RS08195 PF01717 Cobalamin-independent synthase, Catalytic domain CYCME_RS08195 PF08267 Cobalamin-independent synthase, N-terminal domain CYCME_RS08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYCME_RS08200 PF03466 LysR substrate binding domain CYCME_RS08205 PF03477 ATP cone domain CYCME_RS08205 PF02867 Ribonucleotide reductase, barrel domain CYCME_RS08205 PF00317 Ribonucleotide reductase, all-alpha domain CYCME_RS08210 PF00268 Ribonucleotide reductase, small chain CYCME_RS08225 PF05532 CsbD-like CYCME_RS08245 PF00665 Integrase core domain CYCME_RS08245 PF13276 HTH-like domain CYCME_RS08245 PF13333 Integrase core domain CYCME_RS08255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYCME_RS08285 PF00583 Acetyltransferase (GNAT) family CYCME_RS08290 PF00202 Aminotransferase class-III CYCME_RS08295 PF06339 Ectoine synthase CYCME_RS08300 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CYCME_RS08305 PF13840 ACT domain CYCME_RS08305 PF00696 Amino acid kinase family CYCME_RS08325 PF02599 Global regulator protein family CYCME_RS08330 PF00696 Amino acid kinase family CYCME_RS08330 PF01842 ACT domain CYCME_RS08330 PF13840 ACT domain CYCME_RS08335 PF01411 tRNA synthetases class II (A) CYCME_RS08335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYCME_RS08335 PF02272 DHHA1 domain CYCME_RS08340 PF02631 RecX family CYCME_RS08345 PF00154 recA bacterial DNA recombination protein CYCME_RS08350 PF02464 Competence-damaged protein CYCME_RS08355 PF05192 MutS domain III CYCME_RS08355 PF05190 MutS family domain IV CYCME_RS08355 PF00488 MutS domain V CYCME_RS08355 PF05188 MutS domain II CYCME_RS08355 PF01624 MutS domain I CYCME_RS08360 PF13098 Thioredoxin-like domain CYCME_RS08360 PF10411 Disulfide bond isomerase protein N-terminus CYCME_RS08365 PF00589 Phage integrase family CYCME_RS08365 PF02899 Phage integrase, N-terminal SAM-like domain CYCME_RS08370 PF01245 Ribosomal protein L19 CYCME_RS08375 PF01746 tRNA (Guanine-1)-methyltransferase CYCME_RS08380 PF01782 RimM N-terminal domain CYCME_RS08380 PF05239 PRC-barrel domain CYCME_RS08385 PF00886 Ribosomal protein S16 CYCME_RS08390 PF02978 Signal peptide binding domain CYCME_RS08390 PF00448 SRP54-type protein, GTPase domain CYCME_RS08390 PF02881 SRP54-type protein, helical bundle domain CYCME_RS08395 PF01578 Cytochrome C assembly protein CYCME_RS08400 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYCME_RS08405 PF02348 Cytidylyltransferase CYCME_RS08410 PF03966 Trm112p-like protein CYCME_RS08415 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CYCME_RS08420 PF02472 Biopolymer transport protein ExbD/TolR CYCME_RS08425 PF01618 MotA/TolQ/ExbB proton channel family CYCME_RS08430 PF03772 Competence protein CYCME_RS08430 PF00753 Metallo-beta-lactamase superfamily CYCME_RS08440 PF00005 ABC transporter CYCME_RS08445 PF12704 MacB-like periplasmic core domain CYCME_RS08445 PF02687 FtsX-like permease family CYCME_RS08455 PF00270 DEAD/DEAH box helicase CYCME_RS08455 PF02559 CarD-like/TRCF domain CYCME_RS08455 PF17757 UvrB interaction domain CYCME_RS08455 PF03461 TRCF domain CYCME_RS08455 PF00271 Helicase conserved C-terminal domain CYCME_RS08470 PF01048 Phosphorylase superfamily CYCME_RS08475 PF00156 Phosphoribosyl transferase domain CYCME_RS08480 PF00933 Glycosyl hydrolase family 3 N terminal domain CYCME_RS08495 PF01938 TRAM domain CYCME_RS08495 PF05958 tRNA (Uracil-5-)-methyltransferase CYCME_RS08500 PF00291 Pyridoxal-phosphate dependent enzyme CYCME_RS08505 PF07715 TonB-dependent Receptor Plug Domain CYCME_RS08505 PF00593 TonB dependent receptor CYCME_RS08515 PF13333 Integrase core domain CYCME_RS08515 PF00665 Integrase core domain CYCME_RS08515 PF13276 HTH-like domain CYCME_RS08525 PF00072 Response regulator receiver domain CYCME_RS08525 PF01627 Hpt domain CYCME_RS08525 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS08525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYCME_RS08525 PF00672 HAMP domain CYCME_RS08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS08545 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS08550 PF00486 Transcriptional regulatory protein, C terminal CYCME_RS08550 PF00072 Response regulator receiver domain CYCME_RS08565 PF00501 AMP-binding enzyme CYCME_RS08575 PF12800 4Fe-4S binding domain CYCME_RS08575 PF13247 4Fe-4S dicluster domain CYCME_RS08575 PF09163 Formate dehydrogenase N, transmembrane CYCME_RS08580 PF00384 Molybdopterin oxidoreductase CYCME_RS08580 PF01568 Molydopterin dinucleotide binding domain CYCME_RS08580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYCME_RS08585 PF02567 Phenazine biosynthesis-like protein CYCME_RS08590 PF13806 Rieske-like [2Fe-2S] domain CYCME_RS08595 PF18267 Rubredoxin NAD+ reductase C-terminal domain CYCME_RS08595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYCME_RS08595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYCME_RS08595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS08595 PF04324 BFD-like [2Fe-2S] binding domain CYCME_RS08600 PF07690 Major Facilitator Superfamily CYCME_RS08605 PF00069 Protein kinase domain CYCME_RS08605 PF03793 PASTA domain CYCME_RS08615 PF03793 PASTA domain CYCME_RS08615 PF00069 Protein kinase domain CYCME_RS08625 PF02560 Cyanate lyase C-terminal domain CYCME_RS08630 PF00361 Proton-conducting membrane transporter CYCME_RS08640 PF00361 Proton-conducting membrane transporter CYCME_RS08645 PF00361 Proton-conducting membrane transporter CYCME_RS08650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYCME_RS08665 PF03334 Na+/H+ antiporter subunit CYCME_RS08670 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CYCME_RS08680 PF00689 Cation transporting ATPase, C-terminus CYCME_RS08680 PF00690 Cation transporter/ATPase, N-terminus CYCME_RS08690 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYCME_RS08695 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CYCME_RS08705 PF00374 Nickel-dependent hydrogenase CYCME_RS08710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYCME_RS08715 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CYCME_RS08720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CYCME_RS08720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYCME_RS08725 PF01300 Telomere recombination CYCME_RS08725 PF07503 HypF finger CYCME_RS08725 PF17788 HypF Kae1-like domain CYCME_RS08725 PF00708 Acylphosphatase CYCME_RS08730 PF01455 HupF/HypC family CYCME_RS08735 PF01924 Hydrogenase formation hypA family CYCME_RS08740 PF02769 AIR synthase related protein, C-terminal domain CYCME_RS08740 PF00586 AIR synthase related protein, N-terminal domain CYCME_RS08760 PF00873 AcrB/AcrD/AcrF family CYCME_RS08795 PF00216 Bacterial DNA-binding protein CYCME_RS08800 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CYCME_RS08800 PF03484 tRNA synthetase B5 domain CYCME_RS08800 PF03147 Ferredoxin-fold anticodon binding domain CYCME_RS08800 PF01588 Putative tRNA binding domain CYCME_RS08800 PF03483 B3/4 domain CYCME_RS08805 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CYCME_RS08805 PF01409 tRNA synthetases class II core domain (F) CYCME_RS08810 PF00453 Ribosomal protein L20 CYCME_RS08815 PF01632 Ribosomal protein L35 CYCME_RS08820 PF05198 Translation initiation factor IF-3, N-terminal domain CYCME_RS08820 PF00707 Translation initiation factor IF-3, C-terminal domain CYCME_RS08825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYCME_RS08825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYCME_RS08825 PF02824 TGS domain CYCME_RS08825 PF03129 Anticodon binding domain CYCME_RS08835 PF12344 Ultra-violet resistance protein B CYCME_RS08835 PF04851 Type III restriction enzyme, res subunit CYCME_RS08835 PF02151 UvrB/uvrC motif CYCME_RS08835 PF00271 Helicase conserved C-terminal domain CYCME_RS08835 PF17757 UvrB interaction domain CYCME_RS08840 PF00155 Aminotransferase class I and II CYCME_RS08865 PF00005 ABC transporter CYCME_RS08865 PF00664 ABC transporter transmembrane region CYCME_RS08880 PF00355 Rieske [2Fe-2S] domain CYCME_RS08880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS08885 PF00866 Ring hydroxylating beta subunit CYCME_RS08890 PF03922 OmpW family CYCME_RS08895 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYCME_RS08895 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CYCME_RS08900 PF03631 Virulence factor BrkB CYCME_RS08905 PF01883 Iron-sulfur cluster assembly protein CYCME_RS08915 PF03597 Cytochrome oxidase maturation protein cbb3-type CYCME_RS08920 PF00403 Heavy-metal-associated domain CYCME_RS08925 PF00325 Bacterial regulatory proteins, crp family CYCME_RS08925 PF00027 Cyclic nucleotide-binding domain CYCME_RS08930 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYCME_RS08945 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CYCME_RS08945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYCME_RS08955 PF12801 4Fe-4S binding domain CYCME_RS08955 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CYCME_RS08955 PF13746 4Fe-4S dicluster domain CYCME_RS08965 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS08970 PF01479 S4 domain CYCME_RS08970 PF00849 RNA pseudouridylate synthase CYCME_RS08975 PF04079 Segregation and condensation complex subunit ScpB CYCME_RS08980 PF02616 Segregation and condensation protein ScpA CYCME_RS08985 PF02887 Pyruvate kinase, alpha/beta domain CYCME_RS08985 PF00224 Pyruvate kinase, barrel domain CYCME_RS08990 PF06865 Pyrimidine/purine nucleoside phosphorylase CYCME_RS08995 PF00579 tRNA synthetases class I (W and Y) CYCME_RS09000 PF02163 Peptidase family M50 CYCME_RS09005 PF01300 Telomere recombination CYCME_RS09010 PF00814 Glycoprotease family CYCME_RS09015 PF06733 DEAD_2 CYCME_RS09015 PF13307 Helicase C-terminal domain CYCME_RS09030 PF00912 Transglycosylase CYCME_RS09030 PF00905 Penicillin binding protein transpeptidase domain CYCME_RS09030 PF14814 Bifunctional transglycosylase second domain CYCME_RS09035 PF08448 PAS fold CYCME_RS09035 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS09035 PF00563 EAL domain CYCME_RS09045 PF13230 Glutamine amidotransferases class-II CYCME_RS09060 PF01227 GTP cyclohydrolase I CYCME_RS09065 PF01207 Dihydrouridine synthase (Dus) CYCME_RS09070 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CYCME_RS09075 PF02436 Conserved carboxylase domain CYCME_RS09075 PF00682 HMGL-like CYCME_RS09075 PF00364 Biotin-requiring enzyme CYCME_RS09090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYCME_RS09090 PF18269 T3SS EscN ATPase C-terminal domain CYCME_RS09100 PF01706 FliG C-terminal domain CYCME_RS09100 PF14841 FliG middle domain CYCME_RS09100 PF14842 FliG N-terminal domain CYCME_RS09105 PF01514 Secretory protein of YscJ/FliF family CYCME_RS09105 PF08345 Flagellar M-ring protein C-terminal CYCME_RS09110 PF02049 Flagellar hook-basal body complex protein FliE CYCME_RS09115 PF02954 Bacterial regulatory protein, Fis family CYCME_RS09115 PF00072 Response regulator receiver domain CYCME_RS09115 PF00158 Sigma-54 interaction domain CYCME_RS09120 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS09120 PF13188 PAS domain CYCME_RS09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS09125 PF02954 Bacterial regulatory protein, Fis family CYCME_RS09125 PF06490 Flagellar regulatory protein FleQ CYCME_RS09125 PF00158 Sigma-54 interaction domain CYCME_RS09130 PF01595 Cyclin M transmembrane N-terminal domain CYCME_RS09130 PF03471 Transporter associated domain CYCME_RS09130 PF00571 CBS domain CYCME_RS09140 PF18073 Rubredoxin metal binding domain CYCME_RS09145 PF01168 Alanine racemase, N-terminal domain CYCME_RS09145 PF00842 Alanine racemase, C-terminal domain CYCME_RS09150 PF03796 DnaB-like helicase C terminal domain CYCME_RS09150 PF00772 DnaB-like helicase N terminal domain CYCME_RS09155 PF01281 Ribosomal protein L9, N-terminal domain CYCME_RS09155 PF03948 Ribosomal protein L9, C-terminal domain CYCME_RS09165 PF01084 Ribosomal protein S18 CYCME_RS09170 PF01250 Ribosomal protein S6 CYCME_RS09175 PF00588 SpoU rRNA Methylase family CYCME_RS09175 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYCME_RS09180 PF00773 RNB domain CYCME_RS09180 PF00575 S1 RNA binding domain CYCME_RS09180 PF08461 Ribonuclease R winged-helix domain CYCME_RS09180 PF08206 Ribonuclease B OB domain CYCME_RS09180 PF17876 Cold shock domain CYCME_RS09185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYCME_RS09185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYCME_RS09185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYCME_RS09190 PF00378 Enoyl-CoA hydratase/isomerase CYCME_RS09200 PF00501 AMP-binding enzyme CYCME_RS09200 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS09205 PF02803 Thiolase, C-terminal domain CYCME_RS09205 PF00108 Thiolase, N-terminal domain CYCME_RS09210 PF13276 HTH-like domain CYCME_RS09210 PF13333 Integrase core domain CYCME_RS09210 PF00665 Integrase core domain CYCME_RS09220 PF02803 Thiolase, C-terminal domain CYCME_RS09220 PF00108 Thiolase, N-terminal domain CYCME_RS09225 PF00378 Enoyl-CoA hydratase/isomerase CYCME_RS09225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYCME_RS09225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYCME_RS09230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS09230 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS09230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS09230 PF12806 Acetyl-CoA dehydrogenase C-terminal like CYCME_RS09235 PF10531 SLBB domain CYCME_RS09240 PF18073 Rubredoxin metal binding domain CYCME_RS09250 PF00216 Bacterial DNA-binding protein CYCME_RS09255 PF00575 S1 RNA binding domain CYCME_RS09260 PF02224 Cytidylate kinase CYCME_RS09265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYCME_RS09270 PF01842 ACT domain CYCME_RS09270 PF02153 Prephenate dehydrogenase CYCME_RS09275 PF00155 Aminotransferase class I and II CYCME_RS09280 PF01817 Chorismate mutase type II CYCME_RS09280 PF01842 ACT domain CYCME_RS09280 PF00800 Prephenate dehydratase CYCME_RS09285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYCME_RS09285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYCME_RS09285 PF01842 ACT domain CYCME_RS09290 PF00266 Aminotransferase class-V CYCME_RS09295 PF03989 DNA gyrase C-terminal domain, beta-propeller CYCME_RS09295 PF00521 DNA gyrase/topoisomerase IV, subunit A CYCME_RS09300 PF00072 Response regulator receiver domain CYCME_RS09300 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS09305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CYCME_RS09305 PF03120 NAD-dependent DNA ligase OB-fold domain CYCME_RS09305 PF01653 NAD-dependent DNA ligase adenylation domain CYCME_RS09305 PF00533 BRCA1 C Terminus (BRCT) domain CYCME_RS09305 PF12826 Helix-hairpin-helix motif CYCME_RS09315 PF02463 RecF/RecN/SMC N terminal domain CYCME_RS09315 PF06470 SMC proteins Flexible Hinge Domain CYCME_RS09320 PF14489 QueF-like protein CYCME_RS09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS09330 PF00183 Hsp90 protein CYCME_RS09335 PF01758 Sodium Bile acid symporter family CYCME_RS09340 PF00892 EamA-like transporter family CYCME_RS09350 PF00701 Dihydrodipicolinate synthetase family CYCME_RS09370 PF00171 Aldehyde dehydrogenase family CYCME_RS09375 PF00762 Ferrochelatase CYCME_RS09380 PF01370 NAD dependent epimerase/dehydratase family CYCME_RS09380 PF08338 Domain of unknown function (DUF1731) CYCME_RS09390 PF13411 MerR HTH family regulatory protein CYCME_RS09395 PF03441 FAD binding domain of DNA photolyase CYCME_RS09395 PF00875 DNA photolyase CYCME_RS09400 PF08212 Lipocalin-like domain CYCME_RS09435 PF00106 short chain dehydrogenase CYCME_RS09455 PF04542 Sigma-70 region 2 CYCME_RS09455 PF04545 Sigma-70, region 4 CYCME_RS09460 PF12973 ChrR Cupin-like domain CYCME_RS09470 PF02080 TrkA-C domain CYCME_RS09470 PF08443 RimK-like ATP-grasp domain CYCME_RS09470 PF18030 RimK PreATP-grasp domain CYCME_RS09480 PF18030 RimK PreATP-grasp domain CYCME_RS09480 PF08443 RimK-like ATP-grasp domain CYCME_RS09485 PF01544 CorA-like Mg2+ transporter protein CYCME_RS09490 PF12795 Mechanosensitive ion channel porin domain CYCME_RS09490 PF12794 Mechanosensitive ion channel inner membrane domain 1 CYCME_RS09490 PF00924 Mechanosensitive ion channel CYCME_RS09495 PF04357 TamB, inner membrane protein subunit of TAM complex CYCME_RS09500 PF17243 POTRA domain TamA domain 1 CYCME_RS09500 PF07244 Surface antigen variable number repeat CYCME_RS09500 PF01103 Surface antigen CYCME_RS09505 PF03448 MgtE intracellular N domain CYCME_RS09505 PF00571 CBS domain CYCME_RS09505 PF01769 Divalent cation transporter CYCME_RS09510 PF06146 Phosphate-starvation-inducible E CYCME_RS09515 PF00924 Mechanosensitive ion channel CYCME_RS09535 PF18030 RimK PreATP-grasp domain CYCME_RS09535 PF08443 RimK-like ATP-grasp domain CYCME_RS09550 PF12802 MarR family CYCME_RS09555 PF04632 Fusaric acid resistance protein family CYCME_RS09565 PF00529 HlyD membrane-fusion protein of T1SS CYCME_RS09565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS09575 PF12848 ABC transporter CYCME_RS09575 PF00005 ABC transporter CYCME_RS09575 PF16326 ABC transporter C-terminal domain CYCME_RS09580 PF00994 Probable molybdopterin binding domain CYCME_RS09580 PF02464 Competence-damaged protein CYCME_RS09580 PF18146 Damage-inducible protein CinA KH domain CYCME_RS09590 PF05728 Uncharacterised protein family (UPF0227) CYCME_RS09595 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS09595 PF00563 EAL domain CYCME_RS09595 PF03707 Bacterial signalling protein N terminal repeat CYCME_RS09600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYCME_RS09615 PF01116 Fructose-bisphosphate aldolase class-II CYCME_RS09620 PF01464 Transglycosylase SLT domain CYCME_RS09620 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYCME_RS09625 PF12146 Serine aminopeptidase, S33 CYCME_RS09630 PF14437 MafB19-like deaminase CYCME_RS09635 PF00563 EAL domain CYCME_RS09635 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS09635 PF03707 Bacterial signalling protein N terminal repeat CYCME_RS09645 PF00005 ABC transporter CYCME_RS09650 PF13533 Biotin-lipoyl like CYCME_RS09655 PF02540 NAD synthase CYCME_RS09655 PF00958 GMP synthase C terminal domain CYCME_RS09655 PF00117 Glutamine amidotransferase class-I CYCME_RS09660 PF00478 IMP dehydrogenase / GMP reductase domain CYCME_RS09660 PF00571 CBS domain CYCME_RS09665 PF02601 Exonuclease VII, large subunit CYCME_RS09665 PF13742 OB-fold nucleic acid binding domain CYCME_RS09670 PF01476 LysM domain CYCME_RS09670 PF01551 Peptidase family M23 CYCME_RS09670 PF08525 Opacity-associated protein A N-terminal motif CYCME_RS09680 PF01926 50S ribosome-binding GTPase CYCME_RS09680 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CYCME_RS09685 PF13360 PQQ-like domain CYCME_RS09690 PF09976 Tetratricopeptide repeat-like domain CYCME_RS09695 PF13393 Histidyl-tRNA synthetase CYCME_RS09695 PF03129 Anticodon binding domain CYCME_RS09705 PF04055 Radical SAM superfamily CYCME_RS09710 PF00334 Nucleoside diphosphate kinase CYCME_RS09715 PF01521 Iron-sulphur cluster biosynthesis CYCME_RS09720 PF02416 mttA/Hcf106 family CYCME_RS09730 PF00313 'Cold-shock' DNA-binding domain CYCME_RS09735 PF00271 Helicase conserved C-terminal domain CYCME_RS09735 PF00270 DEAD/DEAH box helicase CYCME_RS09740 PF00005 ABC transporter CYCME_RS09740 PF12848 ABC transporter CYCME_RS09750 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CYCME_RS09760 PF00005 ABC transporter CYCME_RS09765 PF13472 GDSL-like Lipase/Acylhydrolase family CYCME_RS09800 PF00226 DnaJ domain CYCME_RS09800 PF01556 DnaJ C terminal domain CYCME_RS09810 PF00484 Carbonic anhydrase CYCME_RS09825 PF00873 AcrB/AcrD/AcrF family CYCME_RS09830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYCME_RS09835 PF00440 Bacterial regulatory proteins, tetR family CYCME_RS09845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYCME_RS09855 PF02021 Uncharacterised protein family UPF0102 CYCME_RS09860 PF13580 SIS domain CYCME_RS09865 PF04972 BON domain CYCME_RS09870 PF01565 FAD binding domain CYCME_RS09870 PF02913 FAD linked oxidases, C-terminal domain CYCME_RS09875 PF00582 Universal stress protein family CYCME_RS09880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CYCME_RS09880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CYCME_RS09890 PF01510 N-acetylmuramoyl-L-alanine amidase CYCME_RS09895 PF01252 Signal peptidase (SPase) II CYCME_RS09900 PF08264 Anticodon-binding domain of tRNA CYCME_RS09900 PF00133 tRNA synthetases class I (I, L, M and V) CYCME_RS09900 PF06827 Zinc finger found in FPG and IleRS CYCME_RS09905 PF01687 Riboflavin kinase CYCME_RS09905 PF06574 FAD synthetase CYCME_RS09910 PF03023 Lipid II flippase MurJ CYCME_RS09920 PF01649 Ribosomal protein S20 CYCME_RS09925 PF01472 PUA domain CYCME_RS09925 PF00696 Amino acid kinase family CYCME_RS09930 PF01018 GTP1/OBG CYCME_RS09930 PF01926 50S ribosome-binding GTPase CYCME_RS09935 PF01016 Ribosomal L27 protein CYCME_RS09940 PF00829 Ribosomal prokaryotic L21 protein CYCME_RS09945 PF00348 Polyprenyl synthetase CYCME_RS09950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYCME_RS09950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYCME_RS09955 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS09955 PF00501 AMP-binding enzyme CYCME_RS09955 PF16177 Acetyl-coenzyme A synthetase N-terminus CYCME_RS09960 PF00106 short chain dehydrogenase CYCME_RS09980 PF01235 Sodium:alanine symporter family CYCME_RS10000 PF01553 Acyltransferase CYCME_RS10005 PF01171 PP-loop family CYCME_RS10015 PF03167 Uracil DNA glycosylase superfamily CYCME_RS10020 PF01590 GAF domain CYCME_RS10020 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS10020 PF00563 EAL domain CYCME_RS10020 PF00360 Phytochrome region CYCME_RS10025 PF01625 Peptide methionine sulfoxide reductase CYCME_RS10030 PF01430 Hsp33 protein CYCME_RS10035 PF00085 Thioredoxin CYCME_RS10040 PF01541 GIY-YIG catalytic domain CYCME_RS10045 PF10263 SprT-like family CYCME_RS10045 PF17283 SprT-like zinc ribbon domain CYCME_RS10055 PF12241 Trans-2-enoyl-CoA reductase catalytic region CYCME_RS10055 PF07055 Enoyl reductase FAD binding domain CYCME_RS10055 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CYCME_RS10070 PF00664 ABC transporter transmembrane region CYCME_RS10070 PF00005 ABC transporter CYCME_RS10080 PF00929 Exonuclease CYCME_RS10080 PF08411 Exonuclease C-terminal CYCME_RS10085 PF00478 IMP dehydrogenase / GMP reductase domain CYCME_RS10085 PF00571 CBS domain CYCME_RS10095 PF02424 ApbE family CYCME_RS10100 PF00970 Oxidoreductase FAD-binding domain CYCME_RS10100 PF00111 2Fe-2S iron-sulfur cluster binding domain CYCME_RS10100 PF00175 Oxidoreductase NAD-binding domain CYCME_RS10105 PF02508 Rnf-Nqr subunit, membrane protein CYCME_RS10110 PF02508 Rnf-Nqr subunit, membrane protein CYCME_RS10115 PF04205 FMN-binding domain CYCME_RS10120 PF03116 NQR2, RnfD, RnfE family CYCME_RS10125 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CYCME_RS10125 PF11973 NQRA C-terminal domain CYCME_RS10130 PF01061 ABC-2 type transporter CYCME_RS10135 PF00005 ABC transporter CYCME_RS10140 PF03949 Malic enzyme, NAD binding domain CYCME_RS10140 PF01515 Phosphate acetyl/butaryl transferase CYCME_RS10140 PF00390 Malic enzyme, N-terminal domain CYCME_RS10150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYCME_RS10150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CYCME_RS10155 PF00109 Beta-ketoacyl synthase, N-terminal domain CYCME_RS10155 PF02801 Beta-ketoacyl synthase, C-terminal domain CYCME_RS10160 PF07977 FabA-like domain CYCME_RS10170 PF02558 Ketopantoate reductase PanE/ApbA CYCME_RS10170 PF08546 Ketopantoate reductase PanE/ApbA C terminal CYCME_RS10175 PF00561 alpha/beta hydrolase fold CYCME_RS10180 PF00296 Luciferase-like monooxygenase CYCME_RS10185 PF02332 Methane/Phenol/Toluene Hydroxylase CYCME_RS10190 PF02406 MmoB/DmpM family CYCME_RS10195 PF00355 Rieske [2Fe-2S] domain CYCME_RS10200 PF06234 Toluene-4-monooxygenase system protein B (TmoB) CYCME_RS10205 PF02332 Methane/Phenol/Toluene Hydroxylase CYCME_RS10210 PF01361 Tautomerase enzyme CYCME_RS10220 PF07836 DmpG-like communication domain CYCME_RS10220 PF00682 HMGL-like CYCME_RS10225 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYCME_RS10225 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CYCME_RS10235 PF00171 Aldehyde dehydrogenase family CYCME_RS10240 PF03928 Haem-degrading CYCME_RS10245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYCME_RS10250 PF00111 2Fe-2S iron-sulfur cluster binding domain CYCME_RS10250 PF00970 Oxidoreductase FAD-binding domain CYCME_RS10250 PF00175 Oxidoreductase NAD-binding domain CYCME_RS10255 PF04663 Phenol hydroxylase conserved region CYCME_RS10260 PF04945 YHS domain CYCME_RS10260 PF02332 Methane/Phenol/Toluene Hydroxylase CYCME_RS10265 PF02406 MmoB/DmpM family CYCME_RS10270 PF02332 Methane/Phenol/Toluene Hydroxylase CYCME_RS10280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYCME_RS10285 PF00111 2Fe-2S iron-sulfur cluster binding domain CYCME_RS10290 PF00175 Oxidoreductase NAD-binding domain CYCME_RS10290 PF00970 Oxidoreductase FAD-binding domain CYCME_RS10295 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS10300 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CYCME_RS10300 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CYCME_RS10305 PF00866 Ring hydroxylating beta subunit CYCME_RS10310 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS10310 PF00355 Rieske [2Fe-2S] domain CYCME_RS10335 PF13823 Alcohol dehydrogenase GroES-associated CYCME_RS10335 PF00107 Zinc-binding dehydrogenase CYCME_RS10335 PF08240 Alcohol dehydrogenase GroES-like domain CYCME_RS10345 PF12833 Helix-turn-helix domain CYCME_RS10345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CYCME_RS10350 PF00158 Sigma-54 interaction domain CYCME_RS10350 PF02954 Bacterial regulatory protein, Fis family CYCME_RS10350 PF02830 V4R domain CYCME_RS10350 PF06505 Activator of aromatic catabolism CYCME_RS10360 PF02441 Flavoprotein CYCME_RS10370 PF01565 FAD binding domain CYCME_RS10370 PF02913 FAD linked oxidases, C-terminal domain CYCME_RS10380 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYCME_RS10390 PF02913 FAD linked oxidases, C-terminal domain CYCME_RS10390 PF01565 FAD binding domain CYCME_RS10395 PF00171 Aldehyde dehydrogenase family CYCME_RS10400 PF00171 Aldehyde dehydrogenase family CYCME_RS10415 PF00072 Response regulator receiver domain CYCME_RS10415 PF00486 Transcriptional regulatory protein, C terminal CYCME_RS10420 PF00072 Response regulator receiver domain CYCME_RS10420 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS10420 PF00672 HAMP domain CYCME_RS10420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYCME_RS10420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS10420 PF01627 Hpt domain CYCME_RS10425 PF00072 Response regulator receiver domain CYCME_RS10430 PF03707 Bacterial signalling protein N terminal repeat CYCME_RS10430 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS10430 PF00563 EAL domain CYCME_RS10435 PF05231 MASE1 CYCME_RS10435 PF08447 PAS fold CYCME_RS10435 PF08448 PAS fold CYCME_RS10435 PF00563 EAL domain CYCME_RS10435 PF13426 PAS domain CYCME_RS10435 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS10440 PF02254 TrkA-N domain CYCME_RS10440 PF00999 Sodium/hydrogen exchanger family CYCME_RS10445 PF06965 Na+/H+ antiporter 1 CYCME_RS10450 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CYCME_RS10450 PF00561 alpha/beta hydrolase fold CYCME_RS10465 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CYCME_RS10470 PF01867 CRISPR associated protein Cas1 CYCME_RS10475 PF08798 CRISPR associated protein CYCME_RS10480 PF09704 CRISPR-associated protein (Cas_Cas5) CYCME_RS10485 PF09344 CT1975-like protein CYCME_RS10495 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CYCME_RS10500 PF00271 Helicase conserved C-terminal domain CYCME_RS10500 PF18019 HD domain CYCME_RS10500 PF00270 DEAD/DEAH box helicase CYCME_RS10505 PF07804 HipA-like C-terminal domain CYCME_RS10505 PF13657 HipA N-terminal domain CYCME_RS10510 PF01381 Helix-turn-helix CYCME_RS10520 PF06508 Queuosine biosynthesis protein QueC CYCME_RS10525 PF04055 Radical SAM superfamily CYCME_RS10530 PF13174 Tetratricopeptide repeat CYCME_RS10530 PF16331 TolA binding protein trimerisation CYCME_RS10535 PF00691 OmpA family CYCME_RS10540 PF04052 TolB amino-terminal domain CYCME_RS10540 PF07676 WD40-like Beta Propeller Repeat CYCME_RS10550 PF02472 Biopolymer transport protein ExbD/TolR CYCME_RS10555 PF01618 MotA/TolQ/ExbB proton channel family CYCME_RS10560 PF03061 Thioesterase superfamily CYCME_RS10565 PF05496 Holliday junction DNA helicase RuvB P-loop domain CYCME_RS10565 PF05491 RuvB C-terminal winged helix domain CYCME_RS10565 PF17864 RuvB AAA lid domain CYCME_RS10570 PF01330 RuvA N terminal domain CYCME_RS10570 PF07499 RuvA, C-terminal domain CYCME_RS10575 PF02075 Crossover junction endodeoxyribonuclease RuvC CYCME_RS10580 PF01709 Transcriptional regulator CYCME_RS10585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYCME_RS10590 PF00118 TCP-1/cpn60 chaperonin family CYCME_RS10595 PF00166 Chaperonin 10 Kd subunit CYCME_RS10600 PF00899 ThiF family CYCME_RS10630 PF12706 Beta-lactamase superfamily domain CYCME_RS10635 PF03070 TENA/THI-4/PQQC family CYCME_RS10640 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CYCME_RS10645 PF13186 Iron-sulfur cluster-binding domain CYCME_RS10645 PF04055 Radical SAM superfamily CYCME_RS10650 PF08240 Alcohol dehydrogenase GroES-like domain CYCME_RS10650 PF00107 Zinc-binding dehydrogenase CYCME_RS10655 PF00561 alpha/beta hydrolase fold CYCME_RS10660 PF01266 FAD dependent oxidoreductase CYCME_RS10675 PF00072 Response regulator receiver domain CYCME_RS10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS10680 PF00989 PAS fold CYCME_RS10680 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS10685 PF01794 Ferric reductase like transmembrane component CYCME_RS10690 PF00174 Oxidoreductase molybdopterin binding domain CYCME_RS10695 PF00011 Hsp20/alpha crystallin family CYCME_RS10700 PF07690 Major Facilitator Superfamily CYCME_RS10710 PF01272 Transcription elongation factor, GreA/GreB, C-term CYCME_RS10710 PF03449 Transcription elongation factor, N-terminal CYCME_RS10715 PF02810 SEC-C motif CYCME_RS10720 PF00072 Response regulator receiver domain CYCME_RS10720 PF00990 Diguanylate cyclase, GGDEF domain CYCME_RS10735 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CYCME_RS10735 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CYCME_RS10735 PF02769 AIR synthase related protein, C-terminal domain CYCME_RS10740 PF00753 Metallo-beta-lactamase superfamily CYCME_RS10740 PF16123 Hydroxyacylglutathione hydrolase C-terminus CYCME_RS10750 PF00701 Dihydrodipicolinate synthetase family CYCME_RS10755 PF00578 AhpC/TSA family CYCME_RS10765 PF01594 AI-2E family transporter CYCME_RS10775 PF00892 EamA-like transporter family CYCME_RS10785 PF12627 Probable RNA and SrmB- binding site of polymerase A CYCME_RS10785 PF01743 Poly A polymerase head domain CYCME_RS10785 PF12626 Polymerase A arginine-rich C-terminus CYCME_RS10790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CYCME_RS10795 PF01712 Deoxynucleoside kinase CYCME_RS10800 PF02548 Ketopantoate hydroxymethyltransferase CYCME_RS10805 PF02569 Pantoate-beta-alanine ligase CYCME_RS10810 PF00924 Mechanosensitive ion channel CYCME_RS10815 PF02261 Aspartate decarboxylase CYCME_RS10820 PF00753 Metallo-beta-lactamase superfamily CYCME_RS10820 PF00581 Rhodanese-like domain CYCME_RS10835 PF03737 Aldolase/RraA CYCME_RS10840 PF01923 Cobalamin adenosyltransferase CYCME_RS10845 PF02401 LytB protein CYCME_RS10850 PF00108 Thiolase, N-terminal domain CYCME_RS10850 PF02803 Thiolase, C-terminal domain CYCME_RS10875 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CYCME_RS10885 PF00034 Cytochrome c CYCME_RS10895 PF00462 Glutaredoxin CYCME_RS10900 PF01479 S4 domain CYCME_RS10905 PF04358 DsrC like protein CYCME_RS10920 PF02635 DsrE/DsrF-like family CYCME_RS10925 PF01435 Peptidase family M48 CYCME_RS10935 PF03739 Lipopolysaccharide export system permease LptF/LptG CYCME_RS10940 PF03739 Lipopolysaccharide export system permease LptF/LptG CYCME_RS10945 PF00883 Cytosol aminopeptidase family, catalytic domain CYCME_RS10945 PF02789 Cytosol aminopeptidase family, N-terminal domain CYCME_RS10950 PF04364 DNA polymerase III chi subunit, HolC CYCME_RS10955 PF00133 tRNA synthetases class I (I, L, M and V) CYCME_RS10955 PF08264 Anticodon-binding domain of tRNA CYCME_RS10955 PF10458 Valyl tRNA synthetase tRNA binding arm CYCME_RS10965 PF00535 Glycosyl transferase family 2 CYCME_RS10970 PF13439 Glycosyltransferase Family 4 CYCME_RS10970 PF00534 Glycosyl transferases group 1 CYCME_RS10975 PF01209 ubiE/COQ5 methyltransferase family CYCME_RS10985 PF01370 NAD dependent epimerase/dehydratase family CYCME_RS10990 PF16363 GDP-mannose 4,6 dehydratase CYCME_RS10995 PF13439 Glycosyltransferase Family 4 CYCME_RS10995 PF00534 Glycosyl transferases group 1 CYCME_RS11020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYCME_RS11020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYCME_RS11020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYCME_RS11025 PF00535 Glycosyl transferase family 2 CYCME_RS11030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYCME_RS11030 PF00437 Type II/IV secretion system protein CYCME_RS11035 PF00482 Type II secretion system (T2SS), protein F CYCME_RS11040 PF01478 Type IV leader peptidase family CYCME_RS11040 PF06750 Bacterial Peptidase A24 N-terminal domain CYCME_RS11045 PF01121 Dephospho-CoA kinase CYCME_RS11050 PF07072 Cell division protein CYCME_RS11055 PF03884 DNA gyrase inhibitor YacG CYCME_RS11060 PF00293 NUDIX domain CYCME_RS11065 PF01960 ArgJ family CYCME_RS11070 PF02810 SEC-C motif CYCME_RS11070 PF07517 SecA DEAD-like domain CYCME_RS11070 PF01043 SecA preprotein cross-linking domain CYCME_RS11070 PF07516 SecA Wing and Scaffold domain CYCME_RS11075 PF10145 Phage-related minor tail protein CYCME_RS11075 PF01551 Peptidase family M23 CYCME_RS11075 PF01464 Transglycosylase SLT domain CYCME_RS11085 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CYCME_RS11090 PF12327 FtsZ family, C-terminal domain CYCME_RS11090 PF00091 Tubulin/FtsZ family, GTPase domain CYCME_RS11095 PF02491 SHS2 domain inserted in FTSA CYCME_RS11100 PF08478 POTRA domain, FtsQ-type CYCME_RS11100 PF03799 Cell division protein FtsQ CYCME_RS11105 PF07478 D-ala D-ala ligase C-terminus CYCME_RS11110 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CYCME_RS11110 PF01565 FAD binding domain CYCME_RS11115 PF01225 Mur ligase family, catalytic domain CYCME_RS11115 PF08245 Mur ligase middle domain CYCME_RS11115 PF02875 Mur ligase family, glutamate ligase domain CYCME_RS11120 PF04101 Glycosyltransferase family 28 C-terminal domain CYCME_RS11120 PF03033 Glycosyltransferase family 28 N-terminal domain CYCME_RS11125 PF01098 Cell cycle protein CYCME_RS11130 PF08245 Mur ligase middle domain CYCME_RS11130 PF02875 Mur ligase family, glutamate ligase domain CYCME_RS11135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CYCME_RS11135 PF00953 Glycosyl transferase family 4 CYCME_RS11140 PF08245 Mur ligase middle domain CYCME_RS11140 PF02875 Mur ligase family, glutamate ligase domain CYCME_RS11140 PF01225 Mur ligase family, catalytic domain CYCME_RS11145 PF02875 Mur ligase family, glutamate ligase domain CYCME_RS11145 PF01225 Mur ligase family, catalytic domain CYCME_RS11145 PF08245 Mur ligase middle domain CYCME_RS11150 PF03717 Penicillin-binding Protein dimerisation domain CYCME_RS11150 PF00905 Penicillin binding protein transpeptidase domain CYCME_RS11155 PF04999 Cell division protein FtsL CYCME_RS11160 PF01795 MraW methylase family CYCME_RS11165 PF02381 MraZ protein, putative antitoxin-like CYCME_RS11180 PF02322 Cytochrome bd terminal oxidase subunit II CYCME_RS11185 PF01654 Cytochrome bd terminal oxidase subunit I CYCME_RS11195 PF02472 Biopolymer transport protein ExbD/TolR CYCME_RS11210 PF07715 TonB-dependent Receptor Plug Domain CYCME_RS11210 PF00593 TonB dependent receptor CYCME_RS11215 PF01070 FMN-dependent dehydrogenase CYCME_RS11220 PF13640 2OG-Fe(II) oxygenase superfamily CYCME_RS11220 PF18331 PKHD-type hydroxylase C-terminal domain CYCME_RS11230 PF00313 'Cold-shock' DNA-binding domain CYCME_RS11240 PF01329 Pterin 4 alpha carbinolamine dehydratase CYCME_RS11260 PF04955 HupE / UreJ protein CYCME_RS11280 PF08378 Nuclease-related domain CYCME_RS11295 PF06071 Protein of unknown function (DUF933) CYCME_RS11295 PF01926 50S ribosome-binding GTPase CYCME_RS11300 PF00180 Isocitrate/isopropylmalate dehydrogenase CYCME_RS11305 PF00682 HMGL-like CYCME_RS11305 PF08502 LeuA allosteric (dimerisation) domain CYCME_RS11310 PF00694 Aconitase C-terminal domain CYCME_RS11315 PF00330 Aconitase family (aconitate hydratase) CYCME_RS11320 PF12697 Alpha/beta hydrolase family CYCME_RS11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYCME_RS11340 PF03466 LysR substrate binding domain CYCME_RS11355 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS11355 PF00501 AMP-binding enzyme CYCME_RS11380 PF05138 Phenylacetic acid catabolic protein CYCME_RS11390 PF00378 Enoyl-CoA hydratase/isomerase CYCME_RS11395 PF00501 AMP-binding enzyme CYCME_RS11395 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS11405 PF03601 Conserved hypothetical protein 698 CYCME_RS11420 PF03309 Type III pantothenate kinase CYCME_RS11425 PF02237 Biotin protein ligase C terminal domain CYCME_RS11425 PF03099 Biotin/lipoate A/B protein ligase family CYCME_RS11435 PF13677 Membrane MotB of proton-channel complex MotA/MotB CYCME_RS11435 PF00691 OmpA family CYCME_RS11440 PF01618 MotA/TolQ/ExbB proton channel family CYCME_RS11445 PF01384 Phosphate transporter family CYCME_RS11450 PF01865 Protein of unknown function DUF47 CYCME_RS11460 PF07396 Phosphate-selective porin O and P CYCME_RS11465 PF01895 PhoU domain CYCME_RS11470 PF00005 ABC transporter CYCME_RS11475 PF00528 Binding-protein-dependent transport system inner membrane component CYCME_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component CYCME_RS11485 PF12849 PBP superfamily domain CYCME_RS11490 PF11808 Phosphate regulon sensor protein PhoR CYCME_RS11490 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS11490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS11490 PF00989 PAS fold CYCME_RS11495 PF00486 Transcriptional regulatory protein, C terminal CYCME_RS11495 PF00072 Response regulator receiver domain CYCME_RS11505 PF07724 AAA domain (Cdc48 subfamily) CYCME_RS11505 PF17871 AAA lid domain CYCME_RS11505 PF00004 ATPase family associated with various cellular activities (AAA) CYCME_RS11505 PF10431 C-terminal, D2-small domain, of ClpB protein CYCME_RS11505 PF02861 Clp amino terminal domain, pathogenicity island component CYCME_RS11510 PF02535 ZIP Zinc transporter CYCME_RS11515 PF02578 Multi-copper polyphenol oxidoreductase laccase CYCME_RS11520 PF00849 RNA pseudouridylate synthase CYCME_RS11525 PF13525 Outer membrane lipoprotein CYCME_RS11530 PF02540 NAD synthase CYCME_RS11530 PF00795 Carbon-nitrogen hydrolase CYCME_RS11535 PF00549 CoA-ligase CYCME_RS11535 PF02629 CoA binding domain CYCME_RS11540 PF08442 ATP-grasp domain CYCME_RS11540 PF00549 CoA-ligase CYCME_RS11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS11545 PF00512 His Kinase A (phospho-acceptor) domain CYCME_RS11550 PF00158 Sigma-54 interaction domain CYCME_RS11550 PF02954 Bacterial regulatory protein, Fis family CYCME_RS11550 PF00072 Response regulator receiver domain CYCME_RS11555 PF07963 Prokaryotic N-terminal methylation motif CYCME_RS11555 PF00114 Pilin (bacterial filament) CYCME_RS11565 PF02445 Quinolinate synthetase A protein CYCME_RS11570 PF00152 tRNA synthetases class II (D, K and N) CYCME_RS11570 PF01336 OB-fold nucleic acid binding domain CYCME_RS11570 PF02938 GAD domain CYCME_RS11580 PF01979 Amidohydrolase family CYCME_RS11585 PF04333 MlaA lipoprotein CYCME_RS11590 PF00929 Exonuclease CYCME_RS11595 PF00462 Glutaredoxin CYCME_RS11605 PF00202 Aminotransferase class-III CYCME_RS11610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYCME_RS11610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYCME_RS11620 PF00920 Dehydratase family CYCME_RS11625 PF01546 Peptidase family M20/M25/M40 CYCME_RS11625 PF07687 Peptidase dimerisation domain CYCME_RS11630 PF00583 Acetyltransferase (GNAT) family CYCME_RS11630 PF00696 Amino acid kinase family CYCME_RS11635 PF00149 Calcineurin-like phosphoesterase CYCME_RS11640 PF00293 NUDIX domain CYCME_RS11650 PF13302 Acetyltransferase (GNAT) domain CYCME_RS11650 PF00958 GMP synthase C terminal domain CYCME_RS11650 PF03352 Methyladenine glycosylase CYCME_RS11650 PF13673 Acetyltransferase (GNAT) domain CYCME_RS11650 PF00117 Glutamine amidotransferase class-I CYCME_RS11655 PF14824 Sirohaem biosynthesis protein central CYCME_RS11655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYCME_RS11655 PF10414 Sirohaem synthase dimerisation region CYCME_RS11660 PF00561 alpha/beta hydrolase fold CYCME_RS11670 PF05736 OprF membrane domain CYCME_RS11670 PF00691 OmpA family CYCME_RS11675 PF05736 OprF membrane domain CYCME_RS11675 PF00691 OmpA family CYCME_RS11685 PF00501 AMP-binding enzyme CYCME_RS11685 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS11690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS11690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYCME_RS11690 PF02770 Acyl-CoA dehydrogenase, middle domain CYCME_RS11690 PF12806 Acetyl-CoA dehydrogenase C-terminal like CYCME_RS11700 PF16177 Acetyl-coenzyme A synthetase N-terminus CYCME_RS11700 PF00501 AMP-binding enzyme CYCME_RS11700 PF13193 AMP-binding enzyme C-terminal domain CYCME_RS11710 PF00285 Citrate synthase, C-terminal domain CYCME_RS11715 PF00330 Aconitase family (aconitate hydratase) CYCME_RS11715 PF00694 Aconitase C-terminal domain CYCME_RS11720 PF04303 PrpF protein CYCME_RS11750 PF00579 tRNA synthetases class I (W and Y) CYCME_RS11755 PF01551 Peptidase family M23 CYCME_RS11760 PF03702 Anhydro-N-acetylmuramic acid kinase CYCME_RS11765 PF01521 Iron-sulphur cluster biosynthesis CYCME_RS11780 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYCME_RS11780 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYCME_RS11785 PF00654 Voltage gated chloride channel CYCME_RS11795 PF03653 Uncharacterised protein family (UPF0093) CYCME_RS11800 PF04362 Bacterial Fe(2+) trafficking CYCME_RS11805 PF01521 Iron-sulphur cluster biosynthesis CYCME_RS11835 PF00939 Sodium:sulfate symporter transmembrane region CYCME_RS11835 PF00939 Sodium:sulfate symporter transmembrane region CYCME_RS11845 PF04751 Protein of unknown function (DUF615) CYCME_RS11860 PF00570 HRDC domain CYCME_RS11860 PF01612 3'-5' exonuclease CYCME_RS11865 PF01464 Transglycosylase SLT domain CYCME_RS11865 PF01476 LysM domain CYCME_RS11885 PF00106 short chain dehydrogenase CYCME_RS11890 PF00436 Single-strand binding protein family CYCME_RS11895 PF07690 Major Facilitator Superfamily CYCME_RS11900 PF17755 UvrA DNA-binding domain CYCME_RS11900 PF17760 UvrA interaction domain CYCME_RS11905 PF01758 Sodium Bile acid symporter family CYCME_RS11910 PF12849 PBP superfamily domain CYCME_RS11920 PF00072 Response regulator receiver domain CYCME_RS11920 PF00158 Sigma-54 interaction domain CYCME_RS11920 PF02954 Bacterial regulatory protein, Fis family CYCME_RS11925 PF03129 Anticodon binding domain CYCME_RS11925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYCME_RS11925 PF04073 Aminoacyl-tRNA editing domain CYCME_RS11930 PF05724 Thiopurine S-methyltransferase (TPMT) CYCME_RS11940 PF00753 Metallo-beta-lactamase superfamily CYCME_RS11945 PF16658 Class II release factor RF3, C-terminal domain CYCME_RS11945 PF00009 Elongation factor Tu GTP binding domain CYCME_RS11970 PF00580 UvrD/REP helicase N-terminal domain CYCME_RS11970 PF13361 UvrD-like helicase C-terminal domain CYCME_RS12005 PF02384 N-6 DNA Methylase CYCME_RS12045 PF02534 Type IV secretory system Conjugative DNA transfer CYCME_RS12075 PF00583 Acetyltransferase (GNAT) family CYCME_RS12080 PF03167 Uracil DNA glycosylase superfamily CYCME_RS12085 PF01066 CDP-alcohol phosphatidyltransferase CYCME_RS12090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CYCME_RS12090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CYCME_RS12095 PF10369 Small subunit of acetolactate synthase CYCME_RS12100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYCME_RS12100 PF00205 Thiamine pyrophosphate enzyme, central domain CYCME_RS12100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYCME_RS12110 PF01323 DSBA-like thioredoxin domain CYCME_RS12115 PF01578 Cytochrome C assembly protein CYCME_RS12120 PF05140 ResB-like family CYCME_RS12125 PF00034 Cytochrome c CYCME_RS12130 PF00034 Cytochrome c CYCME_RS12135 PF01926 50S ribosome-binding GTPase CYCME_RS12140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYCME_RS12140 PF00476 DNA polymerase family A CYCME_RS12140 PF01612 3'-5' exonuclease CYCME_RS12140 PF01367 5'-3' exonuclease, C-terminal SAM fold CYCME_RS12145 PF03641 Possible lysine decarboxylase CYCME_RS12155 PF01636 Phosphotransferase enzyme family CYCME_RS12170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYCME_RS12185 PF06527 TniQ CYCME_RS12185 PF15978 Tn7-like transposition protein D CYCME_RS12190 PF13401 AAA domain CYCME_RS12190 PF11426 Tn7 transposition regulator TnsC CYCME_RS12195 PF00665 Integrase core domain CYCME_RS12200 PF08722 TnsA endonuclease N terminal CYCME_RS12200 PF08721 TnsA endonuclease C terminal CYCME_RS12210 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CYCME_RS12215 PF09278 MerR, DNA binding CYCME_RS12215 PF00376 MerR family regulatory protein CYCME_RS12220 PF02411 MerT mercuric transport protein CYCME_RS12225 PF00403 Heavy-metal-associated domain CYCME_RS12230 PF03203 MerC mercury resistance protein CYCME_RS12235 PF00403 Heavy-metal-associated domain CYCME_RS12235 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYCME_RS12235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYCME_RS12240 PF12324 Helix-turn-helix domain of alkylmercury lyase CYCME_RS12240 PF03243 Alkylmercury lyase CYCME_RS12255 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYCME_RS12255 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYCME_RS12270 PF01380 SIS domain CYCME_RS12275 PF00132 Bacterial transferase hexapeptide (six repeats) CYCME_RS12275 PF12804 MobA-like NTP transferase domain CYCME_RS12280 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CYCME_RS12280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CYCME_RS12285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYCME_RS12285 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYCME_RS12290 PF00231 ATP synthase CYCME_RS12295 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYCME_RS12295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYCME_RS12295 PF00306 ATP synthase alpha/beta chain, C terminal domain CYCME_RS12300 PF00213 ATP synthase delta (OSCP) subunit CYCME_RS12305 PF00430 ATP synthase B/B' CF(0) CYCME_RS12310 PF00137 ATP synthase subunit C CYCME_RS12315 PF00119 ATP synthase A chain CYCME_RS12325 PF17762 HTH domain found in ParB protein CYCME_RS12325 PF02195 ParB-like nuclease domain CYCME_RS12330 PF13614 AAA domain CYCME_RS12335 PF02527 rRNA small subunit methyltransferase G CYCME_RS12340 PF13932 GidA associated domain CYCME_RS12340 PF01134 Glucose inhibited division protein A CYCME_RS12345 PF07726 ATPase family associated with various cellular activities (AAA) CYCME_RS12345 PF17863 AAA lid domain CYCME_RS12350 PF13673 Acetyltransferase (GNAT) domain CYCME_RS12355 PF01323 DSBA-like thioredoxin domain CYCME_RS12360 PF00355 Rieske [2Fe-2S] domain CYCME_RS12365 PF00175 Oxidoreductase NAD-binding domain CYCME_RS12365 PF00111 2Fe-2S iron-sulfur cluster binding domain CYCME_RS12365 PF00970 Oxidoreductase FAD-binding domain CYCME_RS12375 PF00291 Pyridoxal-phosphate dependent enzyme CYCME_RS12380 PF01152 Bacterial-like globin CYCME_RS12385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYCME_RS12395 PF00355 Rieske [2Fe-2S] domain CYCME_RS12395 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS12400 PF00355 Rieske [2Fe-2S] domain CYCME_RS12400 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS12405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYCME_RS12415 PF00866 Ring hydroxylating beta subunit CYCME_RS12420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS12420 PF00355 Rieske [2Fe-2S] domain CYCME_RS12425 PF00027 Cyclic nucleotide-binding domain CYCME_RS12425 PF00325 Bacterial regulatory proteins, crp family CYCME_RS12430 PF00355 Rieske [2Fe-2S] domain CYCME_RS12430 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS12445 PF13360 PQQ-like domain CYCME_RS12445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYCME_RS12460 PF03176 MMPL family CYCME_RS12470 PF08240 Alcohol dehydrogenase GroES-like domain CYCME_RS12470 PF00107 Zinc-binding dehydrogenase CYCME_RS12480 PF00866 Ring hydroxylating beta subunit CYCME_RS12485 PF00355 Rieske [2Fe-2S] domain CYCME_RS12485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYCME_RS12490 PF00106 short chain dehydrogenase CYCME_RS12505 PF11992 Domain of unknown function (DUF3488) CYCME_RS12505 PF13559 Domain of unknown function (DUF4129) CYCME_RS12505 PF01841 Transglutaminase-like superfamily CYCME_RS12510 PF00881 Nitroreductase family CYCME_RS12520 PF12631 MnmE helical domain CYCME_RS12520 PF10396 GTP-binding protein TrmE N-terminus CYCME_RS12520 PF01926 50S ribosome-binding GTPase CYCME_RS12525 PF02096 60Kd inner membrane protein CYCME_RS12525 PF14849 YidC periplasmic domain CYCME_RS12530 PF00825 Ribonuclease P CYCME_RS12535 PF00468 Ribosomal protein L34 CYCME_RS12580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYCME_RS12580 PF01751 Toprim domain CYCME_RS12580 PF00986 DNA gyrase B subunit, carboxyl terminus CYCME_RS12580 PF00204 DNA gyrase B CYCME_RS12580 PF18053 DNA gyrase B subunit insert domain CYCME_RS12635 PF00449 Urease alpha-subunit, N-terminal domain CYCME_RS12635 PF01979 Amidohydrolase family CYCME_RS12690 PF02092 Glycyl-tRNA synthetase beta subunit CYCME_RS12690 PF05746 DALR anticodon binding domain CYCME_RS12800 PF05567 Neisseria PilC beta-propeller domain CYCME_RS12805 PF00483 Nucleotidyl transferase CYCME_RS12810 PF00571 CBS domain CYCME_RS12820 PF08241 Methyltransferase domain CYCME_RS12830 PF07702 UTRA domain CYCME_RS12830 PF00392 Bacterial regulatory proteins, gntR family