CYCME_RS00005	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CYCME_RS00010	SM00480	DNA polymerase III beta subunit
CYCME_RS00020	SM00387	Histidine kinase-like ATPases
CYCME_RS00020	SM00433	TopoisomeraseII
CYCME_RS00045	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS00050	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS00075	SM00988	UreE urease accessory protein, N-terminal domain
CYCME_RS00095	SM00563	Phosphate acyltransferases
CYCME_RS00130	SM01230	CYCME_RS00130
CYCME_RS00140	SM00387	Histidine kinase-like ATPases
CYCME_RS00140	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS00145	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS00145	SM00448	cheY-homologous receiver domain
CYCME_RS00170	SM00450	Rhodanese Homology Domain
CYCME_RS00175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYCME_RS00190	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYCME_RS00190	SM00245	tail specific protease
CYCME_RS00260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYCME_RS00280	SM00842	Cell division protein FtsA
CYCME_RS00300	SM00965	Secretin and TonB N terminus short domain
CYCME_RS00375	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS00425	SM00478	endonuclease III
CYCME_RS00440	SM00867	YceI-like domain 
CYCME_RS00445	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS00445	SM00487	DEAD-like helicases superfamily
CYCME_RS00445	SM00490	helicase superfamily c-terminal domain
CYCME_RS00445	SM00847	Helicase associated domain (HA2)  Add an annotation
CYCME_RS00470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYCME_RS00490	SM00905	Dihydroneopterin aldolase
CYCME_RS00510	SM00400	zinc finger
CYCME_RS00510	SM00493	CYCME_RS00510
CYCME_RS00510	SM00766	DNA primase DnaG DnaB-binding
CYCME_RS00530	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS00535	SM00849	Metallo-beta-lactamase superfamily
CYCME_RS00535	SM01027	Beta-Casp domain
CYCME_RS00555	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS00670	SM01321	CYCME_RS00670
CYCME_RS00680	SM01321	CYCME_RS00680
CYCME_RS00685	SM00271	DnaJ molecular chaperone homology domain
CYCME_RS00700	SM01321	CYCME_RS00700
CYCME_RS00760	SM00244	prohibitin homologues
CYCME_RS00770	SM00769	Water Stress and Hypersensitive response
CYCME_RS00785	SM00481	DNA polymerase alpha chain like domain
CYCME_RS00800	SM00900	CYCME_RS00800
CYCME_RS00940	SM00450	Rhodanese Homology Domain
CYCME_RS00980	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYCME_RS01020	SM01126	CYCME_RS01020
CYCME_RS01025	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CYCME_RS01035	SM00422	helix_turn_helix, mercury resistance
CYCME_RS01065	SM00422	helix_turn_helix, mercury resistance
CYCME_RS01185	SM00984	UDP binding domain
CYCME_RS01285	SM00849	Metallo-beta-lactamase superfamily
CYCME_RS01310	SM00996	S-adenosyl-L-homocysteine hydrolase
CYCME_RS01310	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CYCME_RS01350	SM00732	Likely ribonuclease with RNase H fold.
CYCME_RS01395	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS01400	SM00341	Helicase and RNase D C-terminal
CYCME_RS01400	SM00487	DEAD-like helicases superfamily
CYCME_RS01400	SM00490	helicase superfamily c-terminal domain
CYCME_RS01400	SM00956	CYCME_RS01400
CYCME_RS01415	SM00563	Phosphate acyltransferases
CYCME_RS01420	SM00487	DEAD-like helicases superfamily
CYCME_RS01420	SM00490	helicase superfamily c-terminal domain
CYCME_RS01430	SM00841	Elongation factor P, C-terminal
CYCME_RS01430	SM01185	CYCME_RS01430
CYCME_RS01465	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS01465	SM00267	diguanylate cyclase
CYCME_RS01480	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS01535	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
CYCME_RS01545	SM00450	Rhodanese Homology Domain
CYCME_RS01565	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS01565	SM00448	cheY-homologous receiver domain
CYCME_RS01570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYCME_RS01570	SM00387	Histidine kinase-like ATPases
CYCME_RS01570	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS01595	SM00257	Lysin motif
CYCME_RS01610	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CYCME_RS01610	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CYCME_RS01610	SM00493	CYCME_RS01610
CYCME_RS01615	SM01001	AIR carboxylase
CYCME_RS01635	SM01004	Delta-aminolevulinic acid dehydratase
CYCME_RS01645	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS01705	SM00448	cheY-homologous receiver domain
CYCME_RS01705	SM00850	LytTr DNA-binding domain
CYCME_RS01785	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS01785	SM01086	C-terminal, D2-small domain, of ClpB protein
CYCME_RS01815	SM00507	HNH nucleases
CYCME_RS01835	SM00861	Transketolase, pyrimidine binding domain
CYCME_RS01840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CYCME_RS01885	SM00938	Nitrogen regulatory protein P-II
CYCME_RS01900	SM00838	Elongation factor G C-terminus
CYCME_RS01900	SM00889	Elongation factor G, domain IV
CYCME_RS01940	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS01940	SM00267	diguanylate cyclase
CYCME_RS01955	SM00421	helix_turn_helix, Lux Regulon
CYCME_RS01965	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS02000	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS02015	SM00938	Nitrogen regulatory protein P-II
CYCME_RS02030	SM00271	DnaJ molecular chaperone homology domain
CYCME_RS02035	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS02035	SM00091	PAS domain
CYCME_RS02035	SM00267	diguanylate cyclase
CYCME_RS02105	SM00100	Cyclic nucleotide-monophosphate binding domain
CYCME_RS02105	SM00419	helix_turn_helix, cAMP Regulatory protein
CYCME_RS02195	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS02290	SM00984	UDP binding domain
CYCME_RS02310	SM00267	diguanylate cyclase
CYCME_RS02345	SM01011	Aminopeptidase P, N-terminal domain
CYCME_RS02435	SM00316	Ribosomal protein S1-like RNA-binding domain
CYCME_RS02450	SM00981	CYCME_RS02450
CYCME_RS02465	SM00836	DALR anticodon binding domain
CYCME_RS02465	SM01016	Arginyl tRNA synthetase N terminal dom
CYCME_RS02470	SM00487	DEAD-like helicases superfamily
CYCME_RS02470	SM00490	helicase superfamily c-terminal domain
CYCME_RS02540	SM00852	Probable molybdopterin binding domain
CYCME_RS02545	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYCME_RS02555	SM00100	Cyclic nucleotide-monophosphate binding domain
CYCME_RS02555	SM00450	Rhodanese Homology Domain
CYCME_RS02660	SM00829	Enoylreductase
CYCME_RS02675	SM01018	B12 binding domain
CYCME_RS02685	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS02695	SM00028	Tetratricopeptide repeats
CYCME_RS02700	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS02835	SM00464	Found in ATP-dependent protease La (LON)
CYCME_RS02845	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS02845	SM00267	diguanylate cyclase
CYCME_RS02880	SM00478	endonuclease III
CYCME_RS02880	SM00525	CYCME_RS02880
CYCME_RS02890	SM00487	DEAD-like helicases superfamily
CYCME_RS02890	SM00490	helicase superfamily c-terminal domain
CYCME_RS02900	SM00357	Cold shock protein domain
CYCME_RS02900	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS02900	SM00959	Rho termination factor, N-terminal domain
CYCME_RS02905	SM01209	CYCME_RS02905
CYCME_RS02905	SM01210	CYCME_RS02905
CYCME_RS02910	SM00798	AICARFT/IMPCHase bienzyme
CYCME_RS02910	SM00851	MGS-like domain
CYCME_RS02935	SM00878	Biotin carboxylase C-terminal domain
CYCME_RS02975	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS02990	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS03010	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS03025	SM00220	Serine/Threonine protein kinases, catalytic domain
CYCME_RS03035	SM00072	Guanylate kinase homologues.
CYCME_RS03040	SM01409	CYCME_RS03040
CYCME_RS03045	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYCME_RS03045	SM00954	Region found in RelA / SpoT proteins
CYCME_RS03055	SM00487	DEAD-like helicases superfamily
CYCME_RS03055	SM00490	helicase superfamily c-terminal domain
CYCME_RS03075	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS03075	SM00876	Biotin and Thiamin Synthesis associated domain
CYCME_RS03155	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS03160	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS03160	SM00962	SRP54-type protein, GTPase domain
CYCME_RS03160	SM00963	SRP54-type protein, helical bundle domain
CYCME_RS03200	SM00938	Nitrogen regulatory protein P-II
CYCME_RS03215	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CYCME_RS03215	SM01232	CYCME_RS03215
CYCME_RS03235	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS03295	SM00746	metallochaperone-like domain
CYCME_RS03300	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS03300	SM00091	PAS domain
CYCME_RS03300	SM00267	diguanylate cyclase
CYCME_RS03355	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS03400	SM00650	Ribosomal RNA adenine dimethylases
CYCME_RS03430	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS03450	SM00936	Penicillin-binding protein 5, C-terminal domain 
CYCME_RS03500	SM00845	GatB domain
CYCME_RS03520	SM00937	CYCME_RS03520
CYCME_RS03530	SM00028	Tetratricopeptide repeats
CYCME_RS03550	SM01400	CYCME_RS03550
CYCME_RS03595	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CYCME_RS03595	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CYCME_RS03600	SM00649	Ribosomal protein L11/L12
CYCME_RS03625	SM00663	RNA polymerase I subunit A N-terminus
CYCME_RS03640	SM00838	Elongation factor G C-terminus
CYCME_RS03640	SM00889	Elongation factor G, domain IV
CYCME_RS03650	SM01403	CYCME_RS03650
CYCME_RS03670	SM01382	CYCME_RS03670
CYCME_RS03670	SM01383	CYCME_RS03670
CYCME_RS03685	SM00322	K homology RNA-binding domain
CYCME_RS03705	SM01374	CYCME_RS03705
CYCME_RS03710	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CYCME_RS03770	SM00363	S4 RNA-binding domain
CYCME_RS03770	SM01390	CYCME_RS03770
CYCME_RS03775	SM00662	RNA polymerases D
CYCME_RS03810	SM00318	Staphylococcal nuclease homologues
CYCME_RS03815	SM00852	Probable molybdopterin binding domain
CYCME_RS03820	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS03860	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS03870	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS03885	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYCME_RS03885	SM01091	Transporter associated domain
CYCME_RS03955	SM00316	Ribosomal protein S1-like RNA-binding domain
CYCME_RS03980	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYCME_RS03980	SM00924	MgtE intracellular N domain
CYCME_RS04000	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS04020	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYCME_RS04030	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS04120	SM01322	CYCME_RS04120
CYCME_RS04125	SM00450	Rhodanese Homology Domain
CYCME_RS04135	SM00831	Cation transporter/ATPase, N-terminus
CYCME_RS04180	SM00900	CYCME_RS04180
CYCME_RS04250	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS04255	SM00881	CoA binding domain
CYCME_RS04320	SM00316	Ribosomal protein S1-like RNA-binding domain
CYCME_RS04320	SM00322	K homology RNA-binding domain
CYCME_RS04340	SM01387	CYCME_RS04340
CYCME_RS04345	SM00316	Ribosomal protein S1-like RNA-binding domain
CYCME_RS04345	SM00322	K homology RNA-binding domain
CYCME_RS04355	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYCME_RS04355	SM00465	GIY-YIG type nucleases (URI domain)
CYCME_RS04380	SM00267	diguanylate cyclase
CYCME_RS04385	SM00387	Histidine kinase-like ATPases
CYCME_RS04385	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS04390	SM00448	cheY-homologous receiver domain
CYCME_RS04395	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS04405	SM00493	CYCME_RS04405
CYCME_RS04425	SM00479	CYCME_RS04425
CYCME_RS04445	SM00257	Lysin motif
CYCME_RS04445	SM00646	CYCME_RS04445
CYCME_RS04450	SM00853	MutL C terminal dimerisation domain
CYCME_RS04450	SM01340	CYCME_RS04450
CYCME_RS04470	SM00244	prohibitin homologues
CYCME_RS04475	SM00244	prohibitin homologues
CYCME_RS04490	SM00788	Adenylosuccinate synthetase
CYCME_RS04555	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS04555	SM00962	SRP54-type protein, GTPase domain
CYCME_RS04620	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS04620	SM00267	diguanylate cyclase
CYCME_RS04635	SM00841	Elongation factor P, C-terminal
CYCME_RS04635	SM01185	CYCME_RS04635
CYCME_RS04670	SM00487	DEAD-like helicases superfamily
CYCME_RS04670	SM00490	helicase superfamily c-terminal domain
CYCME_RS04680	SM00822	CYCME_RS04680
CYCME_RS04725	SM00852	Probable molybdopterin binding domain
CYCME_RS04750	SM00487	DEAD-like helicases superfamily
CYCME_RS04750	SM00490	helicase superfamily c-terminal domain
CYCME_RS04765	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYCME_RS04775	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS04780	SM00448	cheY-homologous receiver domain
CYCME_RS04780	SM00862	Transcriptional regulatory protein, C terminal
CYCME_RS04830	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS04835	SM00487	DEAD-like helicases superfamily
CYCME_RS04880	SM00917	LeuA allosteric (dimerisation) domain
CYCME_RS04935	SM00271	DnaJ molecular chaperone homology domain
CYCME_RS04950	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CYCME_RS04955	SM00851	MGS-like domain
CYCME_RS04955	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CYCME_RS04965	SM01103	CYCME_RS04965
CYCME_RS04975	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS05025	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CYCME_RS05030	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CYCME_RS05045	SM00861	Transketolase, pyrimidine binding domain
CYCME_RS05075	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS05075	SM00091	PAS domain
CYCME_RS05075	SM00267	diguanylate cyclase
CYCME_RS05080	SM00387	Histidine kinase-like ATPases
CYCME_RS05080	SM00433	TopoisomeraseII
CYCME_RS05085	SM00434	DNA Topoisomerase IV
CYCME_RS05095	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS05095	SM00267	diguanylate cyclase
CYCME_RS05095	SM00387	Histidine kinase-like ATPases
CYCME_RS05095	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS05095	SM00448	cheY-homologous receiver domain
CYCME_RS05135	SM00861	Transketolase, pyrimidine binding domain
CYCME_RS05205	SM00047	Lysozyme subfamily 2
CYCME_RS05260	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYCME_RS05335	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS05345	SM00267	diguanylate cyclase
CYCME_RS05380	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYCME_RS05395	SM00825	Beta-ketoacyl synthase
CYCME_RS05445	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS05480	SM00357	Cold shock protein domain
CYCME_RS05515	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYCME_RS05520	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CYCME_RS05620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYCME_RS05620	SM00387	Histidine kinase-like ATPases
CYCME_RS05620	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS05625	SM00448	cheY-homologous receiver domain
CYCME_RS05625	SM00862	Transcriptional regulatory protein, C terminal
CYCME_RS05690	SM01323	CYCME_RS05690
CYCME_RS05775	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS05775	SM00091	PAS domain
CYCME_RS05775	SM00267	diguanylate cyclase
CYCME_RS05805	SM00822	CYCME_RS05805
CYCME_RS05810	SM00903	Flavin reductase like domain
CYCME_RS05820	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS05835	SM00882	Coenzyme A transferase
CYCME_RS05840	SM00882	Coenzyme A transferase
CYCME_RS05850	SM00878	Biotin carboxylase C-terminal domain
CYCME_RS05900	SM00881	CoA binding domain
CYCME_RS05930	SM00878	Biotin carboxylase C-terminal domain
CYCME_RS06020	SM00893	Electron transfer flavoprotein domain
CYCME_RS06025	SM00893	Electron transfer flavoprotein domain
CYCME_RS06055	SM00849	Metallo-beta-lactamase superfamily
CYCME_RS06105	SM00316	Ribosomal protein S1-like RNA-binding domain
CYCME_RS06110	SM00363	S4 RNA-binding domain
CYCME_RS06130	SM00448	cheY-homologous receiver domain
CYCME_RS06130	SM00862	Transcriptional regulatory protein, C terminal
CYCME_RS06135	SM00387	Histidine kinase-like ATPases
CYCME_RS06190	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS06190	SM01086	C-terminal, D2-small domain, of ClpB protein
CYCME_RS06195	SM00316	Ribosomal protein S1-like RNA-binding domain
CYCME_RS06215	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CYCME_RS06215	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CYCME_RS06220	SM01130	CYCME_RS06220
CYCME_RS06230	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYCME_RS06445	SM00422	helix_turn_helix, mercury resistance
CYCME_RS06490	SM00938	Nitrogen regulatory protein P-II
CYCME_RS06545	SM00857	Resolvase, N terminal domain
CYCME_RS06620	SM00422	helix_turn_helix, mercury resistance
CYCME_RS06625	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYCME_RS06705	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS06745	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS06755	SM00421	helix_turn_helix, Lux Regulon
CYCME_RS06755	SM00448	cheY-homologous receiver domain
CYCME_RS06765	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS06765	SM00267	diguanylate cyclase
CYCME_RS06765	SM00448	cheY-homologous receiver domain
CYCME_RS06770	SM00448	cheY-homologous receiver domain
CYCME_RS06775	SM00387	Histidine kinase-like ATPases
CYCME_RS06775	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS06775	SM01079	CYCME_RS06775
CYCME_RS06835	SM00028	Tetratricopeptide repeats
CYCME_RS06870	SM00984	UDP binding domain
CYCME_RS06945	SM01126	CYCME_RS06945
CYCME_RS07090	SM00710	Parallel beta-helix repeats
CYCME_RS07145	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS07190	SM00749	bacterial OsmY and nodulation domain
CYCME_RS07195	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS07205	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS07205	SM00843	CYCME_RS07205
CYCME_RS07235	SM00840	CYCME_RS07235
CYCME_RS07270	SM01012	CYCME_RS07270
CYCME_RS07285	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS07290	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS07290	SM00448	cheY-homologous receiver domain
CYCME_RS07380	SM00358	Double-stranded RNA binding motif
CYCME_RS07380	SM00535	Ribonuclease III family
CYCME_RS07395	SM00838	Elongation factor G C-terminus
CYCME_RS07400	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYCME_RS07480	SM00937	CYCME_RS07480
CYCME_RS07555	SM00257	Lysin motif
CYCME_RS07575	SM00463	Small MutS-related domain
CYCME_RS07605	SM01192	CYCME_RS07605
CYCME_RS07605	SM01193	CYCME_RS07605
CYCME_RS07620	SM00977	TilS substrate C-terminal domain
CYCME_RS07630	SM00481	DNA polymerase alpha chain like domain
CYCME_RS07660	SM00935	Outer membrane protein (OmpH-like)
CYCME_RS07670	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYCME_RS07715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYCME_RS07745	SM00091	PAS domain
CYCME_RS07745	SM00267	diguanylate cyclase
CYCME_RS07785	SM00028	Tetratricopeptide repeats
CYCME_RS07785	SM00327	von Willebrand factor (vWF) type A domain
CYCME_RS07790	SM00327	von Willebrand factor (vWF) type A domain
CYCME_RS07835	SM00155	Phospholipase D. Active site motifs.
CYCME_RS07865	SM00100	Cyclic nucleotide-monophosphate binding domain
CYCME_RS07865	SM00419	helix_turn_helix, cAMP Regulatory protein
CYCME_RS07885	SM00100	Cyclic nucleotide-monophosphate binding domain
CYCME_RS07885	SM00419	helix_turn_helix, cAMP Regulatory protein
CYCME_RS08010	SM00479	CYCME_RS08010
CYCME_RS08025	SM00257	Lysin motif
CYCME_RS08030	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS08075	SM00411	bacterial (prokaryotic) histone like domain
CYCME_RS08080	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS08080	SM00464	Found in ATP-dependent protease La (LON)
CYCME_RS08085	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS08085	SM00994	ClpX C4-type zinc finger
CYCME_RS08085	SM01086	C-terminal, D2-small domain, of ClpB protein
CYCME_RS08235	SM00419	helix_turn_helix, cAMP Regulatory protein
CYCME_RS08280	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYCME_RS08310	SM00028	Tetratricopeptide repeats
CYCME_RS08335	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CYCME_RS08345	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS08355	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CYCME_RS08355	SM00534	ATPase domain of DNA mismatch repair MUTS family
CYCME_RS08390	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS08390	SM00962	SRP54-type protein, GTPase domain
CYCME_RS08390	SM00963	SRP54-type protein, helical bundle domain
CYCME_RS08400	SM00226	Low molecular weight phosphatase family
CYCME_RS08430	SM00849	Metallo-beta-lactamase superfamily
CYCME_RS08440	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS08455	SM00487	DEAD-like helicases superfamily
CYCME_RS08455	SM00490	helicase superfamily c-terminal domain
CYCME_RS08455	SM00982	CYCME_RS08455
CYCME_RS08455	SM01058	CarD-like/TRCF domain
CYCME_RS08525	SM00073	Histidine Phosphotransfer domain
CYCME_RS08525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYCME_RS08525	SM00387	Histidine kinase-like ATPases
CYCME_RS08525	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS08525	SM00448	cheY-homologous receiver domain
CYCME_RS08545	SM00387	Histidine kinase-like ATPases
CYCME_RS08545	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS08550	SM00448	cheY-homologous receiver domain
CYCME_RS08550	SM00862	Transcriptional regulatory protein, C terminal
CYCME_RS08560	SM01236	CYCME_RS08560
CYCME_RS08580	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CYCME_RS08605	SM00220	Serine/Threonine protein kinases, catalytic domain
CYCME_RS08605	SM00331	Sigma factor PP2C-like phosphatases
CYCME_RS08605	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CYCME_RS08615	SM00331	Sigma factor PP2C-like phosphatases
CYCME_RS08615	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CYCME_RS08625	SM01116	CYCME_RS08625
CYCME_RS08680	SM00831	Cation transporter/ATPase, N-terminus
CYCME_RS08715	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CYCME_RS08720	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CYCME_RS08790	SM00422	helix_turn_helix, mercury resistance
CYCME_RS08795	SM00411	bacterial (prokaryotic) histone like domain
CYCME_RS08800	SM00873	B3/4 domain
CYCME_RS08800	SM00874	tRNA synthetase B5 domain
CYCME_RS08800	SM00896	Ferredoxin-fold anticodon binding domain
CYCME_RS08825	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CYCME_RS08835	SM00487	DEAD-like helicases superfamily
CYCME_RS08835	SM00490	helicase superfamily c-terminal domain
CYCME_RS08865	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS08925	SM00100	Cyclic nucleotide-monophosphate binding domain
CYCME_RS08925	SM00419	helix_turn_helix, cAMP Regulatory protein
CYCME_RS08965	SM00267	diguanylate cyclase
CYCME_RS08970	SM00363	S4 RNA-binding domain
CYCME_RS09015	SM00487	DEAD-like helicases superfamily
CYCME_RS09015	SM00491	CYCME_RS09015
CYCME_RS09035	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS09035	SM00267	diguanylate cyclase
CYCME_RS09090	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09115	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09115	SM00448	cheY-homologous receiver domain
CYCME_RS09120	SM00387	Histidine kinase-like ATPases
CYCME_RS09120	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS09125	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09130	SM01091	Transporter associated domain
CYCME_RS09135	SM00240	Forkhead associated domain
CYCME_RS09140	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09145	SM01005	Alanine racemase, C-terminal domain
CYCME_RS09150	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09175	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CYCME_RS09180	SM00316	Ribosomal protein S1-like RNA-binding domain
CYCME_RS09180	SM00357	Cold shock protein domain
CYCME_RS09180	SM00955	CYCME_RS09180
CYCME_RS09185	SM00984	UDP binding domain
CYCME_RS09235	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYCME_RS09250	SM00411	bacterial (prokaryotic) histone like domain
CYCME_RS09255	SM00316	Ribosomal protein S1-like RNA-binding domain
CYCME_RS09280	SM00830	Chorismate mutase type II
CYCME_RS09295	SM00434	DNA Topoisomerase IV
CYCME_RS09300	SM00267	diguanylate cyclase
CYCME_RS09305	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYCME_RS09305	SM00292	breast cancer carboxy-terminal domain
CYCME_RS09305	SM00532	Ligase N family
CYCME_RS09310	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CYCME_RS09315	SM00968	SMC proteins Flexible Hinge Domain
CYCME_RS09330	SM00387	Histidine kinase-like ATPases
CYCME_RS09350	SM01130	CYCME_RS09350
CYCME_RS09355	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYCME_RS09390	SM00422	helix_turn_helix, mercury resistance
CYCME_RS09505	SM00924	MgtE intracellular N domain
CYCME_RS09545	SM00631	CYCME_RS09545
CYCME_RS09550	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYCME_RS09575	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09580	SM00852	Probable molybdopterin binding domain
CYCME_RS09595	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS09595	SM00267	diguanylate cyclase
CYCME_RS09595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYCME_RS09595	SM00387	Histidine kinase-like ATPases
CYCME_RS09595	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS09595	SM00448	cheY-homologous receiver domain
CYCME_RS09600	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CYCME_RS09620	SM00062	Bacterial periplasmic substrate-binding proteins
CYCME_RS09635	SM00267	diguanylate cyclase
CYCME_RS09645	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09660	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYCME_RS09660	SM01240	CYCME_RS09660
CYCME_RS09685	SM00564	beta-propeller repeat
CYCME_RS09700	SM00028	Tetratricopeptide repeats
CYCME_RS09710	SM00562	CYCME_RS09710
CYCME_RS09730	SM00357	Cold shock protein domain
CYCME_RS09735	SM00487	DEAD-like helicases superfamily
CYCME_RS09735	SM00490	helicase superfamily c-terminal domain
CYCME_RS09740	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09760	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS09800	SM00271	DnaJ molecular chaperone homology domain
CYCME_RS09810	SM00947	Carbonic anhydrase
CYCME_RS09890	SM00644	CYCME_RS09890
CYCME_RS09905	SM00904	Riboflavin kinase
CYCME_RS09925	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CYCME_RS09950	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CYCME_RS09960	SM00822	CYCME_RS09960
CYCME_RS10000	SM00563	Phosphate acyltransferases
CYCME_RS10015	SM00986	Uracil DNA glycosylase superfamily
CYCME_RS10015	SM00987	UreE urease accessory protein, C-terminal domain 
CYCME_RS10020	SM00091	PAS domain
CYCME_RS10020	SM00267	diguanylate cyclase
CYCME_RS10045	SM00731	SprT homologues.
CYCME_RS10070	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS10080	SM00479	CYCME_RS10080
CYCME_RS10085	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYCME_RS10115	SM00900	CYCME_RS10115
CYCME_RS10135	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS10140	SM00919	Malic enzyme, NAD binding domain
CYCME_RS10140	SM01274	CYCME_RS10140
CYCME_RS10155	SM00825	Beta-ketoacyl synthase
CYCME_RS10225	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYCME_RS10335	SM00829	Enoylreductase
CYCME_RS10345	SM00342	helix_turn_helix, arabinose operon control protein
CYCME_RS10350	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS10350	SM00989	CYCME_RS10350
CYCME_RS10405	SM00450	Rhodanese Homology Domain
CYCME_RS10415	SM00448	cheY-homologous receiver domain
CYCME_RS10420	SM00387	Histidine kinase-like ATPases
CYCME_RS10420	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS10420	SM00448	cheY-homologous receiver domain
CYCME_RS10425	SM00448	cheY-homologous receiver domain
CYCME_RS10430	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS10430	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYCME_RS10430	SM00091	PAS domain
CYCME_RS10430	SM00267	diguanylate cyclase
CYCME_RS10430	SM00448	cheY-homologous receiver domain
CYCME_RS10435	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYCME_RS10435	SM00267	diguanylate cyclase
CYCME_RS10475	SM01101	CYCME_RS10475
CYCME_RS10500	SM00487	DEAD-like helicases superfamily
CYCME_RS10510	SM00530	Helix-turn-helix XRE-family like proteins 
CYCME_RS10565	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS10570	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYCME_RS10595	SM00883	Chaperonin 10 Kd subunit
CYCME_RS10645	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYCME_RS10675	SM00448	cheY-homologous receiver domain
CYCME_RS10675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYCME_RS10680	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYCME_RS10680	SM00091	PAS domain
CYCME_RS10680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYCME_RS10680	SM00387	Histidine kinase-like ATPases
CYCME_RS10680	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS10720	SM00267	diguanylate cyclase
CYCME_RS10735	SM01211	CYCME_RS10735
CYCME_RS10740	SM00849	Metallo-beta-lactamase superfamily
CYCME_RS10750	SM01130	CYCME_RS10750
CYCME_RS10820	SM00450	Rhodanese Homology Domain
CYCME_RS10820	SM00849	Metallo-beta-lactamase superfamily
CYCME_RS10900	SM00363	S4 RNA-binding domain
CYCME_RS10925	SM00028	Tetratricopeptide repeats
CYCME_RS11020	SM00984	UDP binding domain
CYCME_RS11030	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS11070	SM00957	SecA DEAD-like domain
CYCME_RS11070	SM00958	SecA preprotein cross-linking domain
CYCME_RS11090	SM00864	Tubulin/FtsZ family, GTPase domain
CYCME_RS11090	SM00865	Tubulin/FtsZ family, C-terminal domain
CYCME_RS11095	SM00842	Cell division protein FtsA
CYCME_RS11220	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CYCME_RS11230	SM00357	Cold shock protein domain
CYCME_RS11300	SM01329	CYCME_RS11300
CYCME_RS11305	SM00917	LeuA allosteric (dimerisation) domain
CYCME_RS11470	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS11490	SM00387	Histidine kinase-like ATPases
CYCME_RS11490	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS11495	SM00448	cheY-homologous receiver domain
CYCME_RS11495	SM00862	Transcriptional regulatory protein, C terminal
CYCME_RS11500	SM00052	Putative diguanylate phosphodiesterase
CYCME_RS11500	SM00267	diguanylate cyclase
CYCME_RS11505	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS11505	SM01086	C-terminal, D2-small domain, of ClpB protein
CYCME_RS11520	SM00363	S4 RNA-binding domain
CYCME_RS11535	SM00881	CoA binding domain
CYCME_RS11545	SM00387	Histidine kinase-like ATPases
CYCME_RS11545	SM00388	His Kinase A (phosphoacceptor) domain
CYCME_RS11550	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS11550	SM00448	cheY-homologous receiver domain
CYCME_RS11575	SM00834	Putative regulatory protein
CYCME_RS11590	SM00479	CYCME_RS11590
CYCME_RS11615	SM00287	Bacterial SH3 domain homologues
CYCME_RS11665	SM00320	WD40 repeats
CYCME_RS11695	SM00849	Metallo-beta-lactamase superfamily
CYCME_RS11750	SM00363	S4 RNA-binding domain
CYCME_RS11780	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYCME_RS11815	SM00900	CYCME_RS11815
CYCME_RS11830	SM00271	DnaJ molecular chaperone homology domain
CYCME_RS11860	SM00341	Helicase and RNase D C-terminal
CYCME_RS11860	SM00474	3'-5' exonuclease
CYCME_RS11865	SM00257	Lysin motif
CYCME_RS11920	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS11940	SM00849	Metallo-beta-lactamase superfamily
CYCME_RS11985	SM00487	DEAD-like helicases superfamily
CYCME_RS12080	SM00986	Uracil DNA glycosylase superfamily
CYCME_RS12080	SM00987	UreE urease accessory protein, C-terminal domain 
CYCME_RS12140	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CYCME_RS12140	SM00474	3'-5' exonuclease
CYCME_RS12140	SM00475	5'-3' exonuclease
CYCME_RS12140	SM00482	DNA polymerase A domain
CYCME_RS12215	SM00422	helix_turn_helix, mercury resistance
CYCME_RS12245	SM00422	helix_turn_helix, mercury resistance
CYCME_RS12255	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CYCME_RS12260	SM01126	CYCME_RS12260
CYCME_RS12285	SM00382	ATPases associated with a variety of cellular activities
CYCME_RS12325	SM00470	ParB-like nuclease domain
CYCME_RS12340	SM01228	CYCME_RS12340
CYCME_RS12425	SM00100	Cyclic nucleotide-monophosphate binding domain
CYCME_RS12425	SM00419	helix_turn_helix, cAMP Regulatory protein
CYCME_RS12445	SM00564	beta-propeller repeat
CYCME_RS12470	SM00829	Enoylreductase
CYCME_RS12505	SM00460	Transglutaminase/protease-like homologues
CYCME_RS12810	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYCME_RS12830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
