CYCME_RS09810 15f10329a2cb3e970f77add19c9d6f58 200 PANTHER PTHR11002 1 192 1.9E-104 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CYCME_RS09810 15f10329a2cb3e970f77add19c9d6f58 200 SMART SM00947 30 193 7.3E-68 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CYCME_RS09810 15f10329a2cb3e970f77add19c9d6f58 200 Gene3D G3DSA:3.40.1050.10 1 194 4.7E-74 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CYCME_RS09810 15f10329a2cb3e970f77add19c9d6f58 200 PANTHER PTHR11002:SF20 1 192 1.9E-104 T 23-04-2016 CYCME_RS09810 15f10329a2cb3e970f77add19c9d6f58 200 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CYCME_RS09810 15f10329a2cb3e970f77add19c9d6f58 200 SUPERFAMILY SSF53056 2 192 2.75E-74 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CYCME_RS09810 15f10329a2cb3e970f77add19c9d6f58 200 Pfam PF00484 Carbonic anhydrase 37 187 1.9E-53 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Pfam PF14492 Elongation Factor G, domain II 410 483 3.1E-32 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.7E-66 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PANTHER PTHR23115 309 696 0.0 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PANTHER PTHR23115 6 184 0.0 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 163 4.6E-29 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Pfam PF03764 Elongation factor G, domain IV 485 602 1.1E-45 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 696 107.831 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.9E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.9E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.9E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.9E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Gene3D G3DSA:3.40.50.300 6 293 2.9E-102 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Pfam PF03144 Elongation factor Tu domain 2 330 397 6.0E-19 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PANTHER PTHR23115:SF66 309 696 0.0 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PANTHER PTHR23115:SF66 6 184 0.0 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 SUPERFAMILY SSF54211 488 604 1.47E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 SMART SM00889 486 603 4.9E-72 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Gene3D G3DSA:3.30.70.870 411 486 4.0E-36 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Gene3D G3DSA:3.30.70.240 605 690 5.1E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 SUPERFAMILY SSF52540 6 288 3.03E-104 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Gene3D G3DSA:3.30.230.10 490 604 1.4E-49 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 SUPERFAMILY SSF50447 271 410 4.64E-37 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 693 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Gene3D G3DSA:2.40.30.10 311 410 3.6E-38 T 23-04-2016 CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 SMART SM00838 605 692 4.0E-52 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 SUPERFAMILY SSF54980 410 487 2.77E-23 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 Pfam PF00679 Elongation factor G C-terminus 606 690 3.0E-28 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS03640 cd8587b3e8c28c9b67ab98c730210427 698 SUPERFAMILY SSF54980 608 693 1.44E-28 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 SUPERFAMILY SSF47323 318 462 2.09E-36 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 Gene3D G3DSA:1.20.120.640 308 393 1.0E-20 T 23-04-2016 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 1.5E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 1.5E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 1.5E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 1.5E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 Gene3D G3DSA:3.40.50.620 20 307 3.5E-111 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 SMART SM00840 342 403 1.7E-19 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 315 3.7E-132 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 Pfam PF09190 DALR domain 342 403 4.7E-18 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 462 9.5E-175 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 SUPERFAMILY SSF52374 4 314 5.89E-101 T 23-04-2016 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 PANTHER PTHR10890 4 462 3.5E-238 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CYCME_RS07235 8dd70d85245e817310674701ef4a473c 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 463 38.503 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 Hamap MF_00970 Ribonuclease E [rne]. 1 855 30.087 T 23-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 Pfam PF00575 S1 RNA binding domain 36 115 7.3E-8 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 SMART SM00316 37 116 1.0E-5 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 Gene3D G3DSA:2.40.50.140 33 121 6.2E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 Pfam PF10150 Ribonuclease E/G family 118 388 1.9E-91 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 PANTHER PTHR30001 1 831 8.8E-297 T 23-04-2016 CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 PANTHER PTHR30001:SF1 1 831 8.8E-297 T 23-04-2016 CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 421 1.0E-154 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CYCME_RS06105 649c1703c7817bb56dfed4d30fa37368 860 SUPERFAMILY SSF50249 40 121 1.71E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03945 d3d4f92962e3e05053e24d258e428f30 156 PIRSF PIRSF004505 1 155 3.2E-48 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS03945 d3d4f92962e3e05053e24d258e428f30 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.2E-56 T 23-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS03945 d3d4f92962e3e05053e24d258e428f30 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 5.6E-54 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS03945 d3d4f92962e3e05053e24d258e428f30 156 Gene3D G3DSA:3.40.1280.10 1 155 3.5E-56 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYCME_RS03945 d3d4f92962e3e05053e24d258e428f30 156 PANTHER PTHR33603 1 155 2.5E-62 T 23-04-2016 CYCME_RS03945 d3d4f92962e3e05053e24d258e428f30 156 PANTHER PTHR33603:SF1 1 155 2.5E-62 T 23-04-2016 CYCME_RS03945 d3d4f92962e3e05053e24d258e428f30 156 SUPERFAMILY SSF75217 1 154 1.52E-51 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CYCME_RS03945 d3d4f92962e3e05053e24d258e428f30 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 29.181 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS11695 541fd099639d2d067514f3310d0c62ef 313 Gene3D G3DSA:3.60.15.10 24 260 5.6E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS11695 541fd099639d2d067514f3310d0c62ef 313 PANTHER PTHR11935 13 238 3.5E-53 T 23-04-2016 CYCME_RS11695 541fd099639d2d067514f3310d0c62ef 313 SMART SM00849 25 230 2.4E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS11695 541fd099639d2d067514f3310d0c62ef 313 Pfam PF00753 Metallo-beta-lactamase superfamily 23 222 5.0E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS11695 541fd099639d2d067514f3310d0c62ef 313 PANTHER PTHR11935:SF28 13 238 3.5E-53 T 23-04-2016 CYCME_RS11695 541fd099639d2d067514f3310d0c62ef 313 SUPERFAMILY SSF56281 9 256 1.18E-50 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 Pfam PF00164 Ribosomal protein S12/S23 4 123 1.4E-43 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.0E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.0E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.0E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.0E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.0E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.0E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 PANTHER PTHR11652 1 116 2.6E-71 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 SUPERFAMILY SSF50249 3 123 8.22E-51 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 PIRSF PIRSF002133 1 124 4.0E-54 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.199 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.6E-69 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CYCME_RS03630 ca83e0c135956a1be619b7a82d0c13d7 124 Gene3D G3DSA:2.40.50.140 1 123 1.9E-64 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS06160 a7918fb62cb280fff29e4d02c236b57a 149 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CYCME_RS06160 a7918fb62cb280fff29e4d02c236b57a 149 Gene3D G3DSA:3.90.79.10 2 142 8.6E-29 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS06160 a7918fb62cb280fff29e4d02c236b57a 149 SUPERFAMILY SSF55811 4 147 1.49E-24 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS06160 a7918fb62cb280fff29e4d02c236b57a 149 Pfam PF00293 NUDIX domain 5 121 1.1E-12 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CYCME_RS06160 a7918fb62cb280fff29e4d02c236b57a 149 PANTHER PTHR22769 2 130 8.5E-18 T 23-04-2016 CYCME_RS00250 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 31 77 3.6E-11 T 23-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CYCME_RS00250 ccdce56266ab9a79547771207d7d6a21 425 PANTHER PTHR33498:SF1 2 395 1.4E-29 T 23-04-2016 CYCME_RS00250 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF01610 Transposase 148 382 4.3E-62 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYCME_RS00250 ccdce56266ab9a79547771207d7d6a21 425 PANTHER PTHR33498 2 395 1.4E-29 T 23-04-2016 CYCME_RS00250 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 132 6.3E-9 T 23-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CYCME_RS00990 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 31 77 3.6E-11 T 23-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CYCME_RS00990 ccdce56266ab9a79547771207d7d6a21 425 PANTHER PTHR33498:SF1 2 395 1.4E-29 T 23-04-2016 CYCME_RS00990 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF01610 Transposase 148 382 4.3E-62 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYCME_RS00990 ccdce56266ab9a79547771207d7d6a21 425 PANTHER PTHR33498 2 395 1.4E-29 T 23-04-2016 CYCME_RS00990 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 132 6.3E-9 T 23-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CYCME_RS09365 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 31 77 3.6E-11 T 23-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CYCME_RS09365 ccdce56266ab9a79547771207d7d6a21 425 PANTHER PTHR33498:SF1 2 395 1.4E-29 T 23-04-2016 CYCME_RS09365 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF01610 Transposase 148 382 4.3E-62 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYCME_RS09365 ccdce56266ab9a79547771207d7d6a21 425 PANTHER PTHR33498 2 395 1.4E-29 T 23-04-2016 CYCME_RS09365 ccdce56266ab9a79547771207d7d6a21 425 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 132 6.3E-9 T 23-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 385 405 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 649 1.9E-263 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 Pfam PF11842 Domain of unknown function (DUF3362) 599 707 9.7E-39 T 23-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 Pfam PF04055 Radical SAM superfamily 385 590 4.4E-20 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 Gene3D G3DSA:3.80.30.20 379 621 1.5E-48 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 SUPERFAMILY SSF102114 475 629 1.09E-13 T 23-04-2016 CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 SUPERFAMILY SSF102114 354 445 1.09E-13 T 23-04-2016 CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 SMART SM00729 381 638 2.4E-6 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 697 48.368 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 Pfam PF08497 Radical SAM N-terminal 24 384 4.6E-144 T 23-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 PANTHER PTHR32331 4 684 0.0 T 23-04-2016 CYCME_RS01480 b12359aa3d94948011bbcfed0b80fcb7 720 PANTHER PTHR32331:SF3 4 684 0.0 T 23-04-2016 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 683 29.647 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 Gene3D G3DSA:3.30.1840.10 108 302 1.7E-42 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 PIRSF PIRSF015589 2 689 2.7E-231 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 SUPERFAMILY SSF56024 316 498 4.19E-49 T 23-04-2016 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 Pfam PF02503 Polyphosphate kinase middle domain 120 322 1.2E-39 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 4.2E-140 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 SUPERFAMILY SSF143724 109 316 1.8E-52 T 23-04-2016 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 PANTHER PTHR30218:SF0 6 685 1.5E-288 T 23-04-2016 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 SUPERFAMILY SSF140356 8 106 1.22E-31 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 SUPERFAMILY SSF56024 502 685 5.16E-68 T 23-04-2016 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 PANTHER PTHR30218 6 685 1.5E-288 T 23-04-2016 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 Gene3D G3DSA:3.30.870.10 317 501 4.7E-64 T 23-04-2016 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 Gene3D G3DSA:3.30.870.10 502 685 5.1E-69 T 23-04-2016 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 679 4.9E-239 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CYCME_RS04215 b9c2dd3760f288039f3fa0db3af5b057 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 9 111 5.5E-33 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CYCME_RS03635 3e1c767297b02f68e8e9cf24180be08a 156 PIRSF PIRSF002122 2 156 4.4E-57 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CYCME_RS03635 3e1c767297b02f68e8e9cf24180be08a 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 8.3E-67 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CYCME_RS03635 3e1c767297b02f68e8e9cf24180be08a 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 CYCME_RS03635 3e1c767297b02f68e8e9cf24180be08a 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.911 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CYCME_RS03635 3e1c767297b02f68e8e9cf24180be08a 156 SUPERFAMILY SSF47973 1 149 8.37E-58 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CYCME_RS03635 3e1c767297b02f68e8e9cf24180be08a 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.3E-63 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CYCME_RS03635 3e1c767297b02f68e8e9cf24180be08a 156 Gene3D G3DSA:1.10.455.10 9 156 1.0E-61 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CYCME_RS03635 3e1c767297b02f68e8e9cf24180be08a 156 PANTHER PTHR11205 1 156 6.1E-77 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 SUPERFAMILY SSF49493 126 215 6.15E-16 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 SMART SM00271 4 61 1.6E-27 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 Gene3D G3DSA:2.60.260.20 123 210 5.4E-18 T 23-04-2016 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 SUPERFAMILY SSF46565 1 113 1.31E-31 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 PANTHER PTHR24078 4 69 1.6E-74 T 23-04-2016 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 PANTHER PTHR24078 85 304 1.6E-74 T 23-04-2016 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 Gene3D G3DSA:2.60.260.20 213 287 4.8E-17 T 23-04-2016 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 Pfam PF01556 DnaJ C terminal domain 135 287 1.3E-35 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 PANTHER PTHR24078:SF190 4 69 1.6E-74 T 23-04-2016 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 PANTHER PTHR24078:SF190 85 304 1.6E-74 T 23-04-2016 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 Pfam PF00226 DnaJ domain 5 66 8.0E-25 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 PRINTS PR00625 DnaJ domain signature 61 80 3.5E-25 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 PRINTS PR00625 DnaJ domain signature 41 61 3.5E-25 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 PRINTS PR00625 DnaJ domain signature 7 25 3.5E-25 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 PRINTS PR00625 DnaJ domain signature 25 40 3.5E-25 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 SUPERFAMILY SSF49493 216 298 4.71E-19 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 Gene3D G3DSA:1.10.287.110 1 113 2.3E-32 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09800 a6ac464e881d792c092626778b4f02de 315 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 23-04-2016 IPR018253 DnaJ domain, conserved site CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 Gene3D G3DSA:1.10.8.60 144 221 2.8E-28 T 23-04-2016 CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 SUPERFAMILY SSF48019 211 333 3.91E-27 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 333 1.4E-10 T 23-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 7.1E-87 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 PANTHER PTHR34388 1 341 5.1E-60 T 23-04-2016 CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 SUPERFAMILY SSF52540 1 209 5.49E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 Gene3D G3DSA:1.20.272.20 222 337 5.5E-33 T 23-04-2016 CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 Pfam PF06144 DNA polymerase III, delta subunit 20 188 1.8E-29 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CYCME_RS03920 c1c71f784fbf624f4897e2899436a4bb 341 Gene3D G3DSA:3.40.50.300 1 139 2.0E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10870 627849ee46ac7fa38d6bedb9483825bc 74 PANTHER PTHR35175:SF2 11 60 3.1E-12 T 23-04-2016 CYCME_RS10870 627849ee46ac7fa38d6bedb9483825bc 74 PANTHER PTHR35175 11 60 3.1E-12 T 23-04-2016 CYCME_RS10870 627849ee46ac7fa38d6bedb9483825bc 74 Pfam PF06945 Protein of unknown function (DUF1289) 13 58 3.2E-17 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 CYCME_RS02670 27788812000bdb643febaebed8e75a06 267 PANTHER PTHR20858 1 265 1.1E-69 T 23-04-2016 CYCME_RS02670 27788812000bdb643febaebed8e75a06 267 Pfam PF08543 Phosphomethylpyrimidine kinase 21 259 4.1E-69 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 CYCME_RS02670 27788812000bdb643febaebed8e75a06 267 Gene3D G3DSA:3.40.1190.20 12 264 3.6E-76 T 23-04-2016 IPR029056 Ribokinase-like CYCME_RS02670 27788812000bdb643febaebed8e75a06 267 SUPERFAMILY SSF53613 11 264 5.46E-64 T 23-04-2016 IPR029056 Ribokinase-like CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 Gene3D G3DSA:3.90.1150.10 286 416 1.0E-54 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 PIRSF PIRSF000412 1 415 9.8E-169 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 Gene3D G3DSA:3.40.640.10 37 285 9.4E-108 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 Pfam PF00464 Serine hydroxymethyltransferase 9 386 2.0E-180 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 SUPERFAMILY SSF53383 6 416 4.26E-182 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.381 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 PANTHER PTHR11680 1 416 1.4E-302 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CYCME_RS04265 6d093296968e7e0036bde2970894add1 418 PANTHER PTHR11680:SF9 1 416 1.4E-302 T 23-04-2016 CYCME_RS11705 7b5d12a3bcefeb38ed657a65e80d3f0f 294 PANTHER PTHR21631:SF4 1 294 2.7E-150 T 23-04-2016 CYCME_RS11705 7b5d12a3bcefeb38ed657a65e80d3f0f 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 253 1.6E-50 T 23-04-2016 CYCME_RS11705 7b5d12a3bcefeb38ed657a65e80d3f0f 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 290 3.6E-132 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 CYCME_RS11705 7b5d12a3bcefeb38ed657a65e80d3f0f 294 Gene3D G3DSA:3.20.20.60 5 287 4.2E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS11705 7b5d12a3bcefeb38ed657a65e80d3f0f 294 SUPERFAMILY SSF51621 4 289 2.11E-101 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS11705 7b5d12a3bcefeb38ed657a65e80d3f0f 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 291 50.082 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 CYCME_RS11705 7b5d12a3bcefeb38ed657a65e80d3f0f 294 ProSitePatterns PS00161 Isocitrate lyase signature. 120 125 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CYCME_RS11705 7b5d12a3bcefeb38ed657a65e80d3f0f 294 PANTHER PTHR21631 1 294 2.7E-150 T 23-04-2016 CYCME_RS11470 e441110520b5e681e9ce1dacb0594da6 261 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS11470 e441110520b5e681e9ce1dacb0594da6 261 Pfam PF00005 ABC transporter 22 186 3.9E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS11470 e441110520b5e681e9ce1dacb0594da6 261 PANTHER PTHR24220:SF585 6 259 1.9E-118 T 23-04-2016 CYCME_RS11470 e441110520b5e681e9ce1dacb0594da6 261 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 261 5.4E-107 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CYCME_RS11470 e441110520b5e681e9ce1dacb0594da6 261 Gene3D G3DSA:3.40.50.300 3 256 1.3E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11470 e441110520b5e681e9ce1dacb0594da6 261 PANTHER PTHR24220 6 259 1.9E-118 T 23-04-2016 CYCME_RS11470 e441110520b5e681e9ce1dacb0594da6 261 SUPERFAMILY SSF52540 4 254 9.49E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11470 e441110520b5e681e9ce1dacb0594da6 261 SMART SM00382 31 242 2.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 Gene3D G3DSA:1.10.10.10 146 220 3.0E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 Pfam PF13545 Crp-like helix-turn-helix domain 149 218 1.5E-13 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 SUPERFAMILY SSF51206 3 142 6.81E-32 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 PANTHER PTHR24567 1 222 3.0E-39 T 23-04-2016 CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 SUPERFAMILY SSF46785 147 220 8.35E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 Pfam PF00027 Cyclic nucleotide-binding domain 29 115 1.0E-18 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 SMART SM00100 9 128 7.7E-17 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 Gene3D G3DSA:2.60.120.10 4 143 8.7E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS07885 d92550b68afc2cb792277d0f978ff8ca 222 SMART SM00419 164 212 4.6E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 Gene3D G3DSA:3.30.70.1430 578 667 5.4E-4 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 SUPERFAMILY SSF82693 277 333 1.44E-19 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 SUPERFAMILY SSF82866 808 1032 4.97E-55 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.0E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.0E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 1.0E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.0E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.0E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.0E-21 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 Gene3D G3DSA:3.30.2090.10 192 275 1.9E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 Gene3D G3DSA:3.30.2090.10 727 809 6.0E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 Pfam PF00873 AcrB/AcrD/AcrF family 5 1030 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 SUPERFAMILY SSF82714 724 808 8.76E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1039 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 SUPERFAMILY SSF82693 566 667 3.66E-7 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 SUPERFAMILY SSF82866 299 506 3.01E-35 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 PANTHER PTHR32063 2 1042 0.0 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 Gene3D G3DSA:3.30.70.1430 42 142 9.1E-28 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 SUPERFAMILY SSF82693 42 127 2.88E-21 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 SUPERFAMILY SSF82714 193 274 3.53E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 SUPERFAMILY SSF82693 156 191 1.44E-19 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 Gene3D G3DSA:1.10.3850.10 816 1030 1.1E-57 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 Gene3D G3DSA:1.10.3850.10 283 508 1.4E-50 T 23-04-2016 CYCME_RS06500 ce2561b0309e4c075923fa02e9ea5c80 1043 PANTHER PTHR32063:SF24 2 1042 0.0 T 23-04-2016 CYCME_RS07580 9bb1ff603eb279016779722579d8d416 266 Pfam PF02673 Bacitracin resistance protein BacA 9 258 4.1E-72 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CYCME_RS07580 9bb1ff603eb279016779722579d8d416 266 PANTHER PTHR30622 1 266 2.1E-104 T 23-04-2016 CYCME_RS07580 9bb1ff603eb279016779722579d8d416 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 16.777 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CYCME_RS07580 9bb1ff603eb279016779722579d8d416 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 1.0E-68 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CYCME_RS07580 9bb1ff603eb279016779722579d8d416 266 PANTHER PTHR30622:SF4 1 266 2.1E-104 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 6 194 5.2E-84 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 Gene3D G3DSA:3.40.50.880 5 195 2.2E-66 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 78 94 4.9E-5 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 48 62 4.9E-5 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PANTHER PTHR11922:SF7 5 194 8.6E-94 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PANTHER PTHR11922 5 194 8.6E-94 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00097 Anthranilate synthase component II signature 51 60 2.7E-36 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00097 Anthranilate synthase component II signature 6 20 2.7E-36 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00097 Anthranilate synthase component II signature 103 111 2.7E-36 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00097 Anthranilate synthase component II signature 173 186 2.7E-36 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00097 Anthranilate synthase component II signature 123 135 2.7E-36 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00097 Anthranilate synthase component II signature 78 89 2.7E-36 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 Pfam PF00117 Glutamine amidotransferase class-I 8 196 1.5E-55 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 7.6E-14 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 7.6E-14 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 78 89 7.6E-14 T 23-04-2016 CYCME_RS02090 d7c75d909b4c88863047e61f2ce4125b 197 SUPERFAMILY SSF52317 5 195 5.29E-55 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS00525 a46c48f4a7dc2690b34e350d36e59e2a 836 SUPERFAMILY SSF82866 237 417 2.35E-28 T 23-04-2016 CYCME_RS00525 a46c48f4a7dc2690b34e350d36e59e2a 836 SUPERFAMILY SSF82866 641 827 1.44E-34 T 23-04-2016 CYCME_RS00525 a46c48f4a7dc2690b34e350d36e59e2a 836 PANTHER PTHR33406 1 97 1.1E-52 T 23-04-2016 CYCME_RS00525 a46c48f4a7dc2690b34e350d36e59e2a 836 PANTHER PTHR33406 151 825 1.1E-52 T 23-04-2016 CYCME_RS00525 a46c48f4a7dc2690b34e350d36e59e2a 836 Pfam PF03176 MMPL family 220 421 2.9E-14 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS00525 a46c48f4a7dc2690b34e350d36e59e2a 836 Pfam PF03176 MMPL family 604 822 1.6E-15 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS00525 a46c48f4a7dc2690b34e350d36e59e2a 836 Gene3D G3DSA:1.20.1640.10 652 830 1.1E-33 T 23-04-2016 CYCME_RS00525 a46c48f4a7dc2690b34e350d36e59e2a 836 Gene3D G3DSA:1.20.1640.10 224 425 4.5E-30 T 23-04-2016 CYCME_RS02270 853596c5faad0bfbc2692fe8ac3d1e58 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 1.0E-30 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CYCME_RS02270 853596c5faad0bfbc2692fe8ac3d1e58 318 PANTHER PTHR10366:SF329 2 316 2.3E-104 T 23-04-2016 CYCME_RS02270 853596c5faad0bfbc2692fe8ac3d1e58 318 PANTHER PTHR10366 2 316 2.3E-104 T 23-04-2016 CYCME_RS02270 853596c5faad0bfbc2692fe8ac3d1e58 318 SUPERFAMILY SSF51735 1 314 8.1E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02270 853596c5faad0bfbc2692fe8ac3d1e58 318 Gene3D G3DSA:3.40.50.720 1 308 4.4E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12405 01cce38d099a49bc18f46f8f7b2c04da 325 SUPERFAMILY SSF53659 4 317 2.88E-77 T 23-04-2016 CYCME_RS12405 01cce38d099a49bc18f46f8f7b2c04da 325 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 317 26.472 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CYCME_RS12405 01cce38d099a49bc18f46f8f7b2c04da 325 PANTHER PTHR30004:SF6 1 312 2.7E-81 T 23-04-2016 CYCME_RS12405 01cce38d099a49bc18f46f8f7b2c04da 325 Gene3D G3DSA:3.40.718.10 2 316 7.9E-84 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CYCME_RS12405 01cce38d099a49bc18f46f8f7b2c04da 325 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 312 8.4E-67 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CYCME_RS12405 01cce38d099a49bc18f46f8f7b2c04da 325 PANTHER PTHR30004 1 312 2.7E-81 T 23-04-2016 CYCME_RS05235 dc0bac747620d4116033b09ebbb59acd 131 PANTHER PTHR34773 1 124 1.3E-35 T 23-04-2016 CYCME_RS05235 dc0bac747620d4116033b09ebbb59acd 131 PIRSF PIRSF039090 1 131 4.4E-44 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CYCME_RS05235 dc0bac747620d4116033b09ebbb59acd 131 SUPERFAMILY SSF101116 8 127 2.62E-36 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CYCME_RS05235 dc0bac747620d4116033b09ebbb59acd 131 Pfam PF02561 Flagellar protein FliS 8 124 3.4E-38 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CYCME_RS05235 dc0bac747620d4116033b09ebbb59acd 131 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 124 9.9E-30 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CYCME_RS05235 dc0bac747620d4116033b09ebbb59acd 131 Gene3D G3DSA:1.20.120.340 8 129 8.5E-41 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 Gene3D G3DSA:3.40.50.300 304 522 2.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 SUPERFAMILY SSF52540 305 532 7.73E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 325 553 1.8E-95 T 23-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 PANTHER PTHR24220:SF457 306 555 1.5E-110 T 23-04-2016 CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 Pfam PF00005 ABC transporter 325 465 1.0E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 Pfam PF00005 ABC transporter 23 164 4.5E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 SMART SM00382 32 214 4.4E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 SMART SM00382 333 515 7.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 PANTHER PTHR24220 306 555 1.5E-110 T 23-04-2016 CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 SUPERFAMILY SSF52540 4 233 8.44E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07285 1ab7f373fc68ee3f1fc66f3bf8a452e1 559 Gene3D G3DSA:3.40.50.300 3 219 2.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07175 12ccfe074d8ba3c3cd2a298ca33acfda 469 Pfam PF02397 Bacterial sugar transferase 279 461 1.4E-54 T 23-04-2016 IPR003362 Bacterial sugar transferase CYCME_RS07175 12ccfe074d8ba3c3cd2a298ca33acfda 469 SUPERFAMILY SSF51735 141 275 1.5E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07175 12ccfe074d8ba3c3cd2a298ca33acfda 469 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 24 469 6.9E-157 T 23-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 CYCME_RS07175 12ccfe074d8ba3c3cd2a298ca33acfda 469 PANTHER PTHR30576 1 469 8.6E-164 T 23-04-2016 CYCME_RS07175 12ccfe074d8ba3c3cd2a298ca33acfda 469 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 25 469 3.4E-137 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CYCME_RS07175 12ccfe074d8ba3c3cd2a298ca33acfda 469 PANTHER PTHR30576:SF0 1 469 8.6E-164 T 23-04-2016 CYCME_RS07175 12ccfe074d8ba3c3cd2a298ca33acfda 469 Pfam PF13727 CoA-binding domain 64 243 2.7E-28 T 23-04-2016 CYCME_RS06810 50ed1cb52b26b0d582ceadd4c983fd85 353 SUPERFAMILY SSF51735 1 337 5.72E-94 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06810 50ed1cb52b26b0d582ceadd4c983fd85 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 6.4E-96 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06810 50ed1cb52b26b0d582ceadd4c983fd85 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 340 3.5E-153 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS06810 50ed1cb52b26b0d582ceadd4c983fd85 353 PANTHER PTHR10366:SF41 3 353 2.4E-175 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS06810 50ed1cb52b26b0d582ceadd4c983fd85 353 PANTHER PTHR10366 3 353 2.4E-175 T 23-04-2016 CYCME_RS06810 50ed1cb52b26b0d582ceadd4c983fd85 353 Gene3D G3DSA:3.40.50.720 1 192 4.6E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06810 50ed1cb52b26b0d582ceadd4c983fd85 353 Gene3D G3DSA:3.90.25.10 193 339 2.3E-54 T 23-04-2016 CYCME_RS03415 f873320baaf23d95a4b6d973f8e06703 908 Pfam PF04453 Organic solvent tolerance protein 454 825 2.3E-100 T 23-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CYCME_RS03415 f873320baaf23d95a4b6d973f8e06703 908 Gene3D G3DSA:2.60.450.10 212 361 8.9E-15 T 23-04-2016 CYCME_RS03415 f873320baaf23d95a4b6d973f8e06703 908 Pfam PF03968 OstA-like protein 216 348 2.9E-6 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal CYCME_RS03415 f873320baaf23d95a4b6d973f8e06703 908 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 25 887 21.382 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CYCME_RS03415 f873320baaf23d95a4b6d973f8e06703 908 PANTHER PTHR30189 199 870 4.0E-74 T 23-04-2016 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 SUPERFAMILY SSF52540 137 438 5.91E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 Pfam PF01926 50S ribosome-binding GTPase 178 296 1.4E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.6E-26 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 PIRSF PIRSF006485 1 440 3.8E-170 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 PANTHER PTHR11649:SF5 1 433 2.1E-137 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 5.6E-169 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 54 69 6.1E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 6.1E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.1E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 Gene3D G3DSA:3.30.300.20 359 433 5.8E-23 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 Gene3D G3DSA:3.40.50.300 175 358 3.0E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 Gene3D G3DSA:3.40.50.300 3 165 2.6E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 Hamap MF_00195 GTPase Der [der]. 2 435 37.616 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 432 7.1E-27 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 PANTHER PTHR11649 1 433 2.1E-137 T 23-04-2016 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 SUPERFAMILY SSF52540 1 165 6.07E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 8.5E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS09680 0a23bb6b4cb04dbec1bb56dec13dcb8e 468 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 339 1.6E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS11755 c1060e2bfd1cd4010d016207f436c8e4 472 Gene3D G3DSA:2.70.70.10 292 433 2.3E-42 T 23-04-2016 CYCME_RS11755 c1060e2bfd1cd4010d016207f436c8e4 472 PANTHER PTHR21666:SF221 169 442 2.9E-75 T 23-04-2016 CYCME_RS11755 c1060e2bfd1cd4010d016207f436c8e4 472 Pfam PF01551 Peptidase family M23 336 431 1.3E-29 T 23-04-2016 IPR016047 Peptidase M23 CYCME_RS11755 c1060e2bfd1cd4010d016207f436c8e4 472 SUPERFAMILY SSF51261 183 432 2.98E-68 T 23-04-2016 IPR011055 Duplicated hybrid motif CYCME_RS11755 c1060e2bfd1cd4010d016207f436c8e4 472 Gene3D G3DSA:3.10.350.10 113 158 9.5E-5 T 23-04-2016 IPR018392 LysM domain CYCME_RS11755 c1060e2bfd1cd4010d016207f436c8e4 472 Pfam PF04225 Opacity-associated protein A LysM-like domain 110 175 3.0E-8 T 23-04-2016 IPR007340 Opacity-associated protein A CYCME_RS11755 c1060e2bfd1cd4010d016207f436c8e4 472 PANTHER PTHR21666 169 442 2.9E-75 T 23-04-2016 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 105 191 9.5E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 13 211 1.2E-49 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 SUPERFAMILY SSF56784 10 223 3.25E-49 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 187 7.6E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 192 2.0E-31 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 PANTHER PTHR18901:SF24 1 225 1.8E-77 T 23-04-2016 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 Gene3D G3DSA:1.10.150.240 25 91 1.7E-9 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.3E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 1.3E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.3E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.3E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 PANTHER PTHR18901 1 225 1.8E-77 T 23-04-2016 CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 Gene3D G3DSA:3.40.50.1000 4 24 1.0E-35 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS05735 9be861e24da79bab2e3226a9630b6bc8 227 Gene3D G3DSA:3.40.50.1000 97 223 1.0E-35 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 Pfam PF00664 ABC transporter transmembrane region 62 298 3.7E-28 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 SMART SM00382 370 561 5.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 SUPERFAMILY SSF52540 340 577 4.86E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 Pfam PF00005 ABC transporter 361 509 1.3E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 Gene3D G3DSA:1.20.1560.10 2 331 4.7E-46 T 23-04-2016 CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 SUPERFAMILY SSF90123 2 328 1.96E-49 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 Gene3D G3DSA:3.40.50.300 345 579 1.8E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 PANTHER PTHR24221:SF233 63 578 2.2E-275 T 23-04-2016 CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 PANTHER PTHR24221:SF233 1 43 2.2E-275 T 23-04-2016 CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 PANTHER PTHR24221 63 578 2.2E-275 T 23-04-2016 CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 PANTHER PTHR24221 1 43 2.2E-275 T 23-04-2016 CYCME_RS10070 f67972ab3cdc7be81e63847b79df39bf 581 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS03985 54623e887b8d69dddd14c9fa21773669 285 PANTHER PTHR30448 1 284 1.8E-116 T 23-04-2016 CYCME_RS03985 54623e887b8d69dddd14c9fa21773669 285 SUPERFAMILY SSF52540 1 157 4.09E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03985 54623e887b8d69dddd14c9fa21773669 285 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 285 37.286 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CYCME_RS03985 54623e887b8d69dddd14c9fa21773669 285 PIRSF PIRSF005052 1 285 1.1E-104 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CYCME_RS03985 54623e887b8d69dddd14c9fa21773669 285 Pfam PF03668 P-loop ATPase protein family 1 284 3.6E-89 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CYCME_RS03985 54623e887b8d69dddd14c9fa21773669 285 Gene3D G3DSA:3.40.50.300 1 155 2.5E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03985 54623e887b8d69dddd14c9fa21773669 285 PANTHER PTHR30448:SF0 1 284 1.8E-116 T 23-04-2016 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 412 2.6E-201 T 23-04-2016 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 Gene3D G3DSA:3.90.1150.10 14 54 9.5E-32 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 Gene3D G3DSA:3.90.1150.10 317 413 9.5E-32 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 PANTHER PTHR11986 1 419 3.5E-204 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 Gene3D G3DSA:3.40.640.10 76 311 1.8E-61 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 416 9.8E-150 T 23-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 PANTHER PTHR11986:SF61 1 419 3.5E-204 T 23-04-2016 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 232 268 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 Pfam PF00202 Aminotransferase class-III 17 411 4.8E-82 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS08290 d370c92072b47f9061bfd85f2c1d07e7 430 SUPERFAMILY SSF53383 10 413 8.86E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Pfam PF00012 Hsp70 protein 4 603 4.9E-262 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PANTHER PTHR19375 2 644 0.0 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Gene3D G3DSA:3.90.640.10 230 315 1.2E-30 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.3E-287 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 638 36.744 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Gene3D G3DSA:1.20.1270.10 532 603 7.5E-27 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Gene3D G3DSA:3.30.420.40 4 52 1.8E-63 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Gene3D G3DSA:3.30.420.40 119 192 1.8E-63 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Gene3D G3DSA:3.30.30.30 53 108 4.4E-27 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 SUPERFAMILY SSF53067 187 382 2.04E-68 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Gene3D G3DSA:3.30.420.40 193 229 2.2E-34 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Gene3D G3DSA:3.30.420.40 319 361 2.2E-34 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 469 485 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 198 208 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 388 407 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.2E-82 T 23-04-2016 IPR013126 Heat shock protein 70 family CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 SUPERFAMILY SSF100934 507 615 2.49E-20 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 PANTHER PTHR19375:SF173 2 644 0.0 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 SUPERFAMILY SSF53067 4 184 4.1E-64 T 23-04-2016 CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 SUPERFAMILY SSF100920 384 540 7.72E-61 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 Gene3D G3DSA:2.60.34.10 390 531 3.0E-68 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CYCME_RS04930 fb9da008154f73bd542dce875b884465 644 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 88 105 7.6E-37 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 213 231 7.6E-37 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 270 290 7.6E-37 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 110 126 7.6E-37 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 178 196 7.6E-37 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 163 177 7.6E-37 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 133 152 7.6E-37 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PRINTS PR01486 Bacterial phospholipase A1 protein signature 248 265 7.6E-37 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 SUPERFAMILY SSF56931 41 301 2.48E-86 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 PANTHER PTHR40457 37 301 3.2E-83 T 23-04-2016 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 Pfam PF02253 Phospholipase A1 39 297 9.0E-99 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS01280 582cae3baa89899dc365deba3777a9fe 301 Gene3D G3DSA:2.40.230.10 39 300 2.7E-88 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 43.831 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 SUPERFAMILY SSF54991 694 791 1.19E-25 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Gene3D G3DSA:3.50.40.10 199 390 4.2E-79 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Gene3D G3DSA:3.30.56.20 404 475 3.3E-25 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Gene3D G3DSA:2.40.50.140 41 154 8.5E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 SMART SM00896 699 791 3.6E-33 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Gene3D G3DSA:3.30.930.10 494 685 8.3E-57 T 23-04-2016 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 SMART SM00874 403 471 1.4E-26 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 699 791 3.0E-25 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Gene3D G3DSA:3.30.56.10 155 183 5.0E-24 T 23-04-2016 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Gene3D G3DSA:3.30.56.10 1 38 5.0E-24 T 23-04-2016 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 SUPERFAMILY SSF50249 36 195 1.1E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Pfam PF01588 Putative tRNA binding domain 46 145 4.2E-26 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 SUPERFAMILY SSF46955 406 475 6.23E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 SMART SM00873 212 385 9.3E-95 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Gene3D G3DSA:3.30.70.380 701 791 3.4E-24 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Pfam PF03483 B3/4 domain 213 385 1.4E-68 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 PANTHER PTHR10947:SF0 2 791 1.7E-283 T 23-04-2016 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 PANTHER PTHR10947 2 791 1.7E-283 T 23-04-2016 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 SUPERFAMILY SSF55681 467 684 1.09E-46 T 23-04-2016 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 SUPERFAMILY SSF56037 198 393 7.59E-73 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 Pfam PF03484 tRNA synthetase B5 domain 406 471 4.9E-19 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CYCME_RS08800 c9133ce29252790f064a07375784d7e6 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 7.1E-266 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 512 42.863 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 Gene3D G3DSA:3.20.20.70 3 347 1.5E-148 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 SUPERFAMILY SSF110921 395 502 1.16E-21 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 500 1.5E-213 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 502 2.0E-32 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 PANTHER PTHR10277 4 511 3.2E-243 T 23-04-2016 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 SMART SM00917 371 503 1.5E-38 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 Pfam PF00682 HMGL-like 6 274 6.9E-100 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 200 213 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 SUPERFAMILY SSF51569 3 292 4.94E-100 T 23-04-2016 CYCME_RS04880 d1a2931c74e210966f78c1b171afdda6 517 PANTHER PTHR10277:SF9 4 511 3.2E-243 T 23-04-2016 CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 Pfam PF03167 Uracil DNA glycosylase superfamily 56 210 1.9E-24 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 222 40.06 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 SMART SM00987 51 211 1.9E-36 T 23-04-2016 CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 Gene3D G3DSA:3.40.470.10 6 223 1.2E-99 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 59 68 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 SMART SM00986 51 211 1.9E-36 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 SUPERFAMILY SSF52141 6 223 4.14E-92 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 PANTHER PTHR11264 7 231 1.1E-127 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CYCME_RS10015 d37af907e371444c4ceb53b725f555ed 231 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 215 2.8E-84 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CYCME_RS05365 27eeac898384d4a1a216266f459dbe4a 170 PANTHER PTHR38099 1 170 1.4E-18 T 23-04-2016 CYCME_RS05365 27eeac898384d4a1a216266f459dbe4a 170 Pfam PF02620 Uncharacterized ACR, COG1399 59 168 3.2E-14 T 23-04-2016 IPR003772 Protein of unknown function DUF177 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 28.456 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 PANTHER PTHR11207 6 221 4.3E-73 T 23-04-2016 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 Gene3D G3DSA:1.10.1520.10 7 149 2.8E-43 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 SMART SM00358 156 224 9.6E-20 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 221 1.2E-71 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 Pfam PF14622 Ribonuclease-III-like 19 139 8.2E-33 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 SUPERFAMILY SSF54768 110 223 2.67E-26 T 23-04-2016 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 SMART SM00535 21 149 2.1E-52 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 Pfam PF00035 Double-stranded RNA binding motif 156 222 2.7E-14 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 SUPERFAMILY SSF69065 5 158 2.79E-45 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CYCME_RS07380 373aae9bb11fdf87f64228ed9a1eb07a 225 Gene3D G3DSA:3.30.160.20 154 223 2.2E-24 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 Gene3D G3DSA:3.40.50.1220 189 312 2.5E-58 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 SMART SM00893 4 178 1.1E-32 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 Gene3D G3DSA:3.40.50.620 1 172 6.6E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 Pfam PF01012 Electron transfer flavoprotein domain 4 172 9.5E-30 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 PIRSF PIRSF000089 1 312 6.2E-100 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 SUPERFAMILY SSF52467 192 311 3.45E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 193 275 1.3E-34 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 256 282 - T 23-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 PANTHER PTHR10909 106 308 1.5E-93 T 23-04-2016 CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 PANTHER PTHR10909:SF294 106 308 1.5E-93 T 23-04-2016 CYCME_RS06025 139ecbebeb0a5686b127064f214c1662 312 SUPERFAMILY SSF52402 3 175 6.98E-41 T 23-04-2016 CYCME_RS05320 1df4d23f64b5acc430a9dc822c225c98 398 Gene3D G3DSA:3.90.1150.10 288 397 1.4E-20 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS05320 1df4d23f64b5acc430a9dc822c225c98 398 Gene3D G3DSA:3.40.640.10 43 287 4.4E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS05320 1df4d23f64b5acc430a9dc822c225c98 398 SUPERFAMILY SSF53383 3 396 1.28E-81 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS05320 1df4d23f64b5acc430a9dc822c225c98 398 PANTHER PTHR11751:SF354 12 394 1.5E-120 T 23-04-2016 CYCME_RS05320 1df4d23f64b5acc430a9dc822c225c98 398 PANTHER PTHR11751 12 394 1.5E-120 T 23-04-2016 CYCME_RS05320 1df4d23f64b5acc430a9dc822c225c98 398 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 395 5.7E-191 T 23-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 CYCME_RS05320 1df4d23f64b5acc430a9dc822c225c98 398 Pfam PF00155 Aminotransferase class I and II 32 358 7.5E-43 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 PANTHER PTHR30487 61 290 3.6E-107 T 23-04-2016 CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 PANTHER PTHR30487 2 38 3.6E-107 T 23-04-2016 CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 4.0E-26 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 4.0E-26 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 4.0E-26 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 4.0E-26 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 PANTHER PTHR30487:SF0 61 290 3.6E-107 T 23-04-2016 CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 PANTHER PTHR30487:SF0 2 38 3.6E-107 T 23-04-2016 CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 128 1.6E-33 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CYCME_RS11040 95c4128d60fa6108a398c6451e0b295e 291 Pfam PF01478 Type IV leader peptidase family 139 247 5.7E-23 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 SUPERFAMILY SSF51735 236 267 6.33E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 SUPERFAMILY SSF51735 1 126 6.33E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 Gene3D G3DSA:3.40.50.720 1 163 5.5E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 3.9E-44 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 PIRSF PIRSF000161 1 268 3.1E-87 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 PANTHER PTHR20836 3 268 1.3E-98 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 SUPERFAMILY SSF55347 127 236 3.49E-37 T 23-04-2016 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 PANTHER PTHR20836:SF0 3 268 1.3E-98 T 23-04-2016 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 4.6E-38 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 34.713 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 265 1.4E-98 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS04940 16072ba1afa4bad10a07c81da2714698 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS06960 cd58a17d18e3d49581bb5973e91f3378 329 SUPERFAMILY SSF53335 116 269 1.96E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS06960 cd58a17d18e3d49581bb5973e91f3378 329 Gene3D G3DSA:2.20.25.10 4 39 2.8E-5 T 23-04-2016 CYCME_RS06960 cd58a17d18e3d49581bb5973e91f3378 329 SUPERFAMILY SSF158997 4 46 7.46E-6 T 23-04-2016 CYCME_RS06960 cd58a17d18e3d49581bb5973e91f3378 329 Gene3D G3DSA:3.40.50.150 116 225 1.7E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS06960 cd58a17d18e3d49581bb5973e91f3378 329 Pfam PF08241 Methyltransferase domain 118 212 2.6E-16 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CYCME_RS06960 cd58a17d18e3d49581bb5973e91f3378 329 PANTHER PTHR10108:SF834 103 227 9.6E-20 T 23-04-2016 CYCME_RS06960 cd58a17d18e3d49581bb5973e91f3378 329 PANTHER PTHR10108 103 227 9.6E-20 T 23-04-2016 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 Gene3D G3DSA:1.10.10.60 425 477 3.8E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 Pfam PF00158 Sigma-54 interaction domain 137 303 2.9E-72 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 SMART SM00382 157 300 3.7E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 PANTHER PTHR32071:SF36 128 480 1.8E-184 T 23-04-2016 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 1.3E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 1.3E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 SUPERFAMILY SSF52540 137 379 2.28E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 PANTHER PTHR32071 128 480 1.8E-184 T 23-04-2016 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 Gene3D G3DSA:3.40.50.300 134 309 4.8E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 Gene3D G3DSA:1.10.8.60 310 386 6.5E-22 T 23-04-2016 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 SUPERFAMILY SSF46689 349 392 2.6E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 SUPERFAMILY SSF46689 424 476 2.6E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 Pfam PF06490 Flagellar regulatory protein FleQ 5 116 4.4E-11 T 23-04-2016 IPR010518 Flagellar regulatory FleQ CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CYCME_RS09125 fff7f42748d49ea3c8d31c72ffb83661 480 Pfam PF02954 Bacterial regulatory protein, Fis family 435 474 3.9E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS09430 5b88b370e9bc332826d97a77d329b953 418 Pfam PF01593 Flavin containing amine oxidoreductase 11 300 1.2E-19 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 CYCME_RS09430 5b88b370e9bc332826d97a77d329b953 418 PANTHER PTHR10742 1 405 1.3E-164 T 23-04-2016 CYCME_RS09430 5b88b370e9bc332826d97a77d329b953 418 Gene3D G3DSA:3.50.50.60 1 110 4.2E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS09430 5b88b370e9bc332826d97a77d329b953 418 Gene3D G3DSA:3.50.50.60 199 301 4.2E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS09430 5b88b370e9bc332826d97a77d329b953 418 SUPERFAMILY SSF51905 1 299 4.79E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS09430 5b88b370e9bc332826d97a77d329b953 418 SUPERFAMILY SSF51905 379 406 4.79E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS09430 5b88b370e9bc332826d97a77d329b953 418 PANTHER PTHR10742:SF275 1 405 1.3E-164 T 23-04-2016 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 PANTHER PTHR11451 3 311 1.0E-100 T 23-04-2016 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 Gene3D G3DSA:3.90.800.10 68 179 1.7E-38 T 23-04-2016 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 460 34.139 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 Gene3D G3DSA:3.40.50.620 2 67 2.3E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 Gene3D G3DSA:3.40.50.620 180 229 2.3E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 3.8E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.8E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.8E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.8E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 3.8E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 Gene3D G3DSA:1.10.10.350 362 460 1.5E-27 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 463 2.4E-181 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 SUPERFAMILY SSF52374 3 295 1.85E-111 T 23-04-2016 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 Gene3D G3DSA:1.10.1160.10 232 311 8.2E-33 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 SUPERFAMILY SSF48163 298 460 7.46E-41 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 PANTHER PTHR11451:SF41 3 311 1.0E-100 T 23-04-2016 CYCME_RS08005 cb54ce7c8d9cac204f477e50daeabab2 472 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 1.3E-109 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 12 852 0.0 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Pfam PF05192 MutS domain III 273 562 1.6E-37 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 SUPERFAMILY SSF52540 571 801 4.19E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 SUPERFAMILY SSF53150 118 270 1.06E-42 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 SMART SM00534 610 797 4.5E-116 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 PANTHER PTHR11361:SF86 1 840 0.0 T 23-04-2016 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 SMART SM00533 287 594 3.9E-98 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Pfam PF05190 MutS family domain IV 431 521 8.5E-30 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 691 707 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Gene3D G3DSA:3.40.50.300 572 801 1.2E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 PANTHER PTHR11361 1 840 0.0 T 23-04-2016 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Gene3D G3DSA:3.40.1170.10 7 124 2.3E-48 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 SUPERFAMILY SSF48334 271 569 6.15E-86 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Gene3D G3DSA:3.30.420.110 132 260 2.8E-41 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 PIRSF PIRSF037677 1 854 4.8E-166 T 23-04-2016 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 11 847 24.521 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Pfam PF05188 MutS domain II 133 257 1.6E-29 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Pfam PF00488 MutS domain V 613 800 2.0E-84 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 SUPERFAMILY SSF55271 8 119 1.11E-39 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Pfam PF01624 MutS domain I 12 123 3.8E-40 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 CYCME_RS08355 ec8b0f3fc847e78ad392ef4e0f4d8d2b 856 Gene3D G3DSA:1.10.1420.10 319 480 5.5E-51 T 23-04-2016 CYCME_RS07200 6d5a84105b818a13ade19fe4051a5b2c 210 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 24 204 2.4E-20 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CYCME_RS07200 6d5a84105b818a13ade19fe4051a5b2c 210 SUPERFAMILY SSF89392 32 206 2.08E-44 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX CYCME_RS07200 6d5a84105b818a13ade19fe4051a5b2c 210 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 11 207 27.69 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CYCME_RS07200 6d5a84105b818a13ade19fe4051a5b2c 210 Gene3D G3DSA:2.50.20.10 32 206 2.5E-54 T 23-04-2016 CYCME_RS07200 6d5a84105b818a13ade19fe4051a5b2c 210 PANTHER PTHR35869 11 210 1.6E-37 T 23-04-2016 CYCME_RS07200 6d5a84105b818a13ade19fe4051a5b2c 210 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 196 1.0E-44 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 Pfam PF00108 Thiolase, N-terminal domain 5 267 2.3E-71 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 Pfam PF02803 Thiolase, C-terminal domain 275 399 3.6E-44 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 SUPERFAMILY SSF53901 3 274 8.73E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 PANTHER PTHR18919 1 400 2.0E-197 T 23-04-2016 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 Gene3D G3DSA:3.40.47.10 199 281 9.8E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 Gene3D G3DSA:3.40.47.10 3 124 9.8E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 1.6E-131 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 PIRSF PIRSF000429 1 400 3.2E-129 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 SUPERFAMILY SSF53901 276 399 1.24E-43 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 Gene3D G3DSA:3.40.47.10 282 399 1.9E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 Gene3D G3DSA:3.40.47.10 157 198 1.9E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05940 bb2ef18c64a9ebfa08fe4af9e4cc8247 400 PANTHER PTHR18919:SF91 1 400 2.0E-197 T 23-04-2016 CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 2.1E-46 T 23-04-2016 CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.5E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.5E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.5E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PANTHER PTHR24322 12 138 7.0E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PANTHER PTHR24322 154 186 7.0E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 SUPERFAMILY SSF51735 6 257 8.86E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 Gene3D G3DSA:3.40.50.720 3 258 1.6E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PANTHER PTHR24322:SF25 12 138 7.0E-70 T 23-04-2016 CYCME_RS01205 c36038e17201deb7209cbbc663663bd2 262 PANTHER PTHR24322:SF25 154 186 7.0E-70 T 23-04-2016 CYCME_RS08150 320a8618630a1752053c957dcb9c7523 297 Pfam PF01734 Patatin-like phospholipase 5 163 9.1E-21 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CYCME_RS08150 320a8618630a1752053c957dcb9c7523 297 SUPERFAMILY SSF52151 212 283 1.99E-50 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CYCME_RS08150 320a8618630a1752053c957dcb9c7523 297 SUPERFAMILY SSF52151 1 179 1.99E-50 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CYCME_RS08150 320a8618630a1752053c957dcb9c7523 297 Gene3D G3DSA:3.40.1090.10 5 164 1.4E-8 T 23-04-2016 CYCME_RS08150 320a8618630a1752053c957dcb9c7523 297 PANTHER PTHR14226:SF24 2 292 2.2E-82 T 23-04-2016 CYCME_RS08150 320a8618630a1752053c957dcb9c7523 297 PANTHER PTHR14226 2 292 2.2E-82 T 23-04-2016 CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 7.4E-102 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 SUPERFAMILY SSF56808 6 225 3.27E-77 T 23-04-2016 IPR023674 Ribosomal protein L1-like CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 PIRSF PIRSF002155 1 227 8.9E-75 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 Gene3D G3DSA:3.40.50.790 69 159 6.5E-40 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 Gene3D G3DSA:3.30.190.20 161 226 2.3E-41 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 Gene3D G3DSA:3.30.190.20 18 68 2.3E-41 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.866 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 PANTHER PTHR23105:SF5 11 229 5.6E-75 T 23-04-2016 CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 4.4E-50 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CYCME_RS03605 bc9d768228484ed9bfc652ad189c5d05 232 PANTHER PTHR23105 11 229 5.6E-75 T 23-04-2016 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 440 1.2E-150 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 PRINTS PR00175 Sodium/alanine symporter signature 353 375 3.7E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 PRINTS PR00175 Sodium/alanine symporter signature 93 115 3.7E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 PRINTS PR00175 Sodium/alanine symporter signature 412 432 3.7E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 PRINTS PR00175 Sodium/alanine symporter signature 186 204 3.7E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 PRINTS PR00175 Sodium/alanine symporter signature 214 233 3.7E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 PRINTS PR00175 Sodium/alanine symporter signature 309 327 3.7E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 PANTHER PTHR30330 1 442 1.3E-208 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 PANTHER PTHR30330:SF3 1 442 1.3E-208 T 23-04-2016 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 Pfam PF01235 Sodium:alanine symporter family 57 440 3.3E-140 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS09980 9768c082726411c803cfae73417fd60b 443 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CYCME_RS06635 f69cf89080ad0d6471ed0af1c6792541 232 Gene3D G3DSA:2.40.128.130 135 215 0.001 T 23-04-2016 IPR005546 Autotransporter beta-domain CYCME_RS06635 f69cf89080ad0d6471ed0af1c6792541 232 Pfam PF05275 Copper resistance protein B precursor (CopB) 28 232 2.9E-90 T 23-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 CYCME_RS06635 f69cf89080ad0d6471ed0af1c6792541 232 SUPERFAMILY SSF103515 90 211 3.14E-6 T 23-04-2016 IPR005546 Autotransporter beta-domain CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 PANTHER PTHR30002:SF4 3 354 2.4E-174 T 23-04-2016 CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 Pfam PF13484 4Fe-4S double cluster binding domain 194 258 1.2E-20 T 23-04-2016 CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 Pfam PF08331 Domain of unknown function (DUF1730) 63 142 1.9E-22 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 15 351 1.4E-155 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 8 317 50.037 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 Gene3D G3DSA:3.30.70.20 192 260 6.8E-8 T 23-04-2016 CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 PANTHER PTHR30002 3 354 2.4E-174 T 23-04-2016 CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS04430 058cdb2a08da9d042937ccaef742c10d 360 SUPERFAMILY SSF46548 141 258 2.51E-19 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CYCME_RS00675 b8b86c4aa1c2102de718a9ebc00e26d5 192 PANTHER PTHR30353 24 170 2.7E-12 T 23-04-2016 IPR032818 DedA family CYCME_RS00675 b8b86c4aa1c2102de718a9ebc00e26d5 192 Pfam PF09335 SNARE associated Golgi protein 53 157 7.4E-15 T 23-04-2016 IPR032816 SNARE associated Golgi protein CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 PANTHER PTHR21098 1 217 6.0E-99 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 Gene3D G3DSA:2.40.30.20 5 104 1.2E-31 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 Gene3D G3DSA:2.40.30.20 105 194 2.9E-34 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 SUPERFAMILY SSF63380 93 195 4.25E-35 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 PIRSF PIRSF000498 1 210 7.7E-79 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 Pfam PF00677 Lumazine binding domain 100 184 2.5E-23 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 Pfam PF00677 Lumazine binding domain 3 87 1.5E-21 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 SUPERFAMILY SSF63380 1 90 1.11E-24 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CYCME_RS04280 9eb7f0d73ebab7574ef5dbc726d84d6f 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 195 1.3E-68 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS09565 50659f7d025cf9e5aea6627b88eb4155 293 Gene3D G3DSA:2.40.50.100 155 188 1.2E-19 T 23-04-2016 CYCME_RS09565 50659f7d025cf9e5aea6627b88eb4155 293 Gene3D G3DSA:2.40.50.100 49 81 1.2E-19 T 23-04-2016 CYCME_RS09565 50659f7d025cf9e5aea6627b88eb4155 293 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 242 1.7E-36 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS09565 50659f7d025cf9e5aea6627b88eb4155 293 PANTHER PTHR30367 7 292 4.3E-90 T 23-04-2016 CYCME_RS09565 50659f7d025cf9e5aea6627b88eb4155 293 PANTHER PTHR30367:SF5 7 292 4.3E-90 T 23-04-2016 CYCME_RS09565 50659f7d025cf9e5aea6627b88eb4155 293 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 242 1.2E-16 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CYCME_RS09565 50659f7d025cf9e5aea6627b88eb4155 293 SUPERFAMILY SSF111369 47 219 2.75E-24 T 23-04-2016 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 SUPERFAMILY SSF53850 39 261 4.62E-36 T 23-04-2016 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 PANTHER PTHR21666 266 445 9.7E-98 T 23-04-2016 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 SMART SM00062 37 261 1.1E-23 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 Gene3D G3DSA:3.40.190.10 32 111 6.4E-20 T 23-04-2016 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 Gene3D G3DSA:3.40.190.10 215 253 6.4E-20 T 23-04-2016 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 Gene3D G3DSA:1.10.530.10 424 447 9.2E-41 T 23-04-2016 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 Gene3D G3DSA:1.10.530.10 254 389 9.2E-41 T 23-04-2016 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 4 457 44.134 T 23-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 PANTHER PTHR21666:SF215 266 445 9.7E-98 T 23-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 SUPERFAMILY SSF53955 282 446 5.96E-35 T 23-04-2016 IPR023346 Lysozyme-like domain CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 Pfam PF01464 Transglycosylase SLT domain 289 390 2.4E-26 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 Gene3D G3DSA:3.40.190.10 112 213 5.2E-6 T 23-04-2016 CYCME_RS09620 5d8258c41a125d83c0a3207b8781d20e 473 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 259 1.5E-30 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CYCME_RS01080 2fe070217f785f7b2a5a6be8c9a61f0d 274 Gene3D G3DSA:3.40.1350.10 9 168 2.4E-62 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CYCME_RS01080 2fe070217f785f7b2a5a6be8c9a61f0d 274 Pfam PF08721 TnsA endonuclease C terminal 167 246 8.5E-14 T 23-04-2016 IPR014832 TnsA endonuclease C-terminal CYCME_RS01080 2fe070217f785f7b2a5a6be8c9a61f0d 274 Pfam PF08722 TnsA endonuclease N terminal 75 165 5.0E-21 T 23-04-2016 IPR014833 TnsA endonuclease, N-terminal CYCME_RS01080 2fe070217f785f7b2a5a6be8c9a61f0d 274 SUPERFAMILY SSF52980 9 168 2.73E-61 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CYCME_RS01080 2fe070217f785f7b2a5a6be8c9a61f0d 274 SUPERFAMILY SSF46785 170 268 4.62E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01080 2fe070217f785f7b2a5a6be8c9a61f0d 274 Gene3D G3DSA:1.10.10.10 170 267 2.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS12200 2fe070217f785f7b2a5a6be8c9a61f0d 274 Gene3D G3DSA:3.40.1350.10 9 168 2.4E-62 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CYCME_RS12200 2fe070217f785f7b2a5a6be8c9a61f0d 274 Pfam PF08721 TnsA endonuclease C terminal 167 246 8.5E-14 T 23-04-2016 IPR014832 TnsA endonuclease C-terminal CYCME_RS12200 2fe070217f785f7b2a5a6be8c9a61f0d 274 Pfam PF08722 TnsA endonuclease N terminal 75 165 5.0E-21 T 23-04-2016 IPR014833 TnsA endonuclease, N-terminal CYCME_RS12200 2fe070217f785f7b2a5a6be8c9a61f0d 274 SUPERFAMILY SSF52980 9 168 2.73E-61 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CYCME_RS12200 2fe070217f785f7b2a5a6be8c9a61f0d 274 SUPERFAMILY SSF46785 170 268 4.62E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS12200 2fe070217f785f7b2a5a6be8c9a61f0d 274 Gene3D G3DSA:1.10.10.10 170 267 2.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07570 9f9b50506bba6104d5ad21417b16e831 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 40.447 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CYCME_RS07570 9f9b50506bba6104d5ad21417b16e831 250 PANTHER PTHR30457 1 245 1.2E-92 T 23-04-2016 CYCME_RS07570 9f9b50506bba6104d5ad21417b16e831 250 Pfam PF01975 Survival protein SurE 3 182 3.1E-58 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CYCME_RS07570 9f9b50506bba6104d5ad21417b16e831 250 Gene3D G3DSA:3.40.1210.10 1 247 8.1E-90 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CYCME_RS07570 9f9b50506bba6104d5ad21417b16e831 250 SUPERFAMILY SSF64167 1 248 1.96E-84 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CYCME_RS07570 9f9b50506bba6104d5ad21417b16e831 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 3.4E-69 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 2.3E-47 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Gene3D G3DSA:3.30.160.110 114 148 2.9E-17 T 23-04-2016 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 297 330 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 SUPERFAMILY SSF75615 114 209 4.71E-26 T 23-04-2016 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 6.2E-7 T 23-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Hamap MF_01646 Siroheme synthase [cysG]. 1 459 50.153 T 23-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Gene3D G3DSA:3.30.950.10 333 458 4.4E-45 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 PIRSF PIRSF036426 1 459 1.1E-195 T 23-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 PANTHER PTHR21091:SF16 166 446 3.1E-80 T 23-04-2016 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Gene3D G3DSA:3.40.1010.10 216 332 1.2E-45 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 PANTHER PTHR21091 166 446 3.1E-80 T 23-04-2016 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 SUPERFAMILY SSF53790 216 458 1.57E-78 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.2E-19 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Pfam PF13241 Putative NAD(P)-binding 6 115 1.7E-30 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 SUPERFAMILY SSF51735 1 113 4.21E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Gene3D G3DSA:3.40.50.720 1 113 8.6E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 1.1E-72 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 217 452 5.8E-92 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS11655 c6ba8de1eaed6a0ed67e4227c3b43209 459 Gene3D G3DSA:1.10.8.210 149 209 8.9E-21 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 Pfam PF04002 RadC-like JAB domain 104 220 7.2E-45 T 23-04-2016 IPR025657 RadC-like JAB domain CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 223 8.6E-77 T 23-04-2016 IPR001405 RadC protein CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 SUPERFAMILY SSF102712 153 190 5.23E-5 T 23-04-2016 CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 SUPERFAMILY SSF47781 17 91 1.21E-11 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 PANTHER PTHR30471 1 224 4.5E-123 T 23-04-2016 CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 Gene3D G3DSA:3.40.140.10 101 222 8.3E-49 T 23-04-2016 CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 Gene3D G3DSA:1.10.150.20 48 82 6.3E-4 T 23-04-2016 CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 PANTHER PTHR30471:SF5 1 224 4.5E-123 T 23-04-2016 CYCME_RS02575 10d72ce5bea532a71b78e5993a2b5fc8 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 SUPERFAMILY SSF52374 114 475 4.5E-89 T 23-04-2016 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 Pfam PF05746 DALR anticodon binding domain 464 585 4.5E-33 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 Gene3D G3DSA:3.40.50.620 114 467 2.9E-106 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 SUPERFAMILY SSF47323 459 585 7.85E-34 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 Gene3D G3DSA:3.30.1360.70 2 109 5.3E-31 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 Pfam PF00750 tRNA synthetases class I (R) 295 430 1.5E-11 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 Pfam PF00750 tRNA synthetases class I (R) 100 177 8.9E-12 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 6.1E-20 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 334 355 6.1E-20 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 6.1E-20 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 6.1E-20 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 Gene3D G3DSA:1.10.730.10 468 585 2.9E-40 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 585 1.4E-138 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 PANTHER PTHR11956:SF6 1 213 4.2E-225 T 23-04-2016 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 PANTHER PTHR11956:SF6 237 585 4.2E-225 T 23-04-2016 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 91 3.9E-26 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 SMART SM01016 3 91 6.7E-39 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 PANTHER PTHR11956 1 213 4.2E-225 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 PANTHER PTHR11956 237 585 4.2E-225 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 SUPERFAMILY SSF55190 3 111 1.96E-25 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 585 26.193 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS02465 3761bfb674153ba16005b67d5b7dd980 585 SMART SM00836 464 585 1.8E-52 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CYCME_RS05655 90befa0790f8a31f9fcc5f6f6c60cbc8 154 PANTHER PTHR33570:SF2 16 144 2.9E-16 T 23-04-2016 CYCME_RS05655 90befa0790f8a31f9fcc5f6f6c60cbc8 154 Gene3D G3DSA:1.20.1290.10 54 144 3.0E-18 T 23-04-2016 IPR029032 AhpD-like CYCME_RS05655 90befa0790f8a31f9fcc5f6f6c60cbc8 154 SUPERFAMILY SSF69118 19 136 6.15E-24 T 23-04-2016 IPR029032 AhpD-like CYCME_RS05655 90befa0790f8a31f9fcc5f6f6c60cbc8 154 PANTHER PTHR33570 16 144 2.9E-16 T 23-04-2016 CYCME_RS05655 90befa0790f8a31f9fcc5f6f6c60cbc8 154 Pfam PF02627 Carboxymuconolactone decarboxylase family 59 134 4.4E-13 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 Pfam PF00425 chorismate binding enzyme 182 436 3.5E-87 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 Gene3D G3DSA:3.60.120.10 33 445 4.1E-123 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 SUPERFAMILY SSF56322 22 445 5.36E-118 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 PRINTS PR00095 Anthranilate synthase component I signature 378 392 2.0E-19 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 PRINTS PR00095 Anthranilate synthase component I signature 284 297 2.0E-19 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 PRINTS PR00095 Anthranilate synthase component I signature 393 407 2.0E-19 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 PRINTS PR00095 Anthranilate synthase component I signature 298 311 2.0E-19 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 PANTHER PTHR11236 91 448 6.7E-119 T 23-04-2016 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 PANTHER PTHR11236:SF23 91 448 6.7E-119 T 23-04-2016 CYCME_RS05400 2db8f717667c20cfda1a9d82c10dc651 449 Pfam PF04715 Anthranilate synthase component I, N terminal region 30 144 3.9E-8 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS01275 9248087dbd7e2412fe2b1d114bb0a115 129 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 5 128 36.298 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CYCME_RS01275 9248087dbd7e2412fe2b1d114bb0a115 129 PANTHER PTHR10173 8 128 4.5E-58 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CYCME_RS01275 9248087dbd7e2412fe2b1d114bb0a115 129 Pfam PF01641 SelR domain 8 126 3.1E-54 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CYCME_RS01275 9248087dbd7e2412fe2b1d114bb0a115 129 PANTHER PTHR10173:SF18 8 128 4.5E-58 T 23-04-2016 CYCME_RS01275 9248087dbd7e2412fe2b1d114bb0a115 129 SUPERFAMILY SSF51316 6 128 8.37E-57 T 23-04-2016 IPR011057 Mss4-like CYCME_RS01275 9248087dbd7e2412fe2b1d114bb0a115 129 Gene3D G3DSA:2.170.150.20 5 128 2.5E-59 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CYCME_RS01275 9248087dbd7e2412fe2b1d114bb0a115 129 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 127 3.3E-54 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 PIRSF PIRSF001415 1 320 9.1E-146 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 SUPERFAMILY SSF51569 1 319 8.94E-140 T 23-04-2016 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 SMART SM01004 1 317 5.3E-228 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 Pfam PF00490 Delta-aminolevulinic acid dehydratase 1 316 1.3E-138 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 291 310 4.9E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 182 201 4.9E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 261 276 4.9E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 144 163 4.9E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 236 252 4.9E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 113 127 4.9E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 Gene3D G3DSA:3.20.20.70 1 320 4.6E-147 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 PANTHER PTHR11458 1 321 8.9E-180 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01635 407198afe7348817dbaef878ea3bab70 321 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 236 248 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 SUPERFAMILY SSF56601 250 607 1.45E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 PANTHER PTHR30627:SF2 6 609 9.9E-214 T 23-04-2016 CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 Gene3D G3DSA:3.90.1310.10 131 248 7.9E-33 T 23-04-2016 CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 Gene3D G3DSA:3.40.710.10 250 607 2.2E-106 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 PANTHER PTHR30627 6 609 9.9E-214 T 23-04-2016 CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 235 3.9E-41 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 SUPERFAMILY SSF56519 56 248 5.1E-47 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 606 9.2E-229 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 CYCME_RS03470 fc7830fee61af5e0983a478241104ba6 609 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 602 9.5E-72 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CYCME_RS09690 ee0246008e8b590113fe63922658aa7c 228 PIRSF PIRSF006170 1 215 2.3E-50 T 23-04-2016 IPR026039 Uncharacterised protein family UPF0070 CYCME_RS09690 ee0246008e8b590113fe63922658aa7c 228 Gene3D G3DSA:1.25.40.10 49 195 1.7E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS09690 ee0246008e8b590113fe63922658aa7c 228 SUPERFAMILY SSF48452 164 195 2.23E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS09690 ee0246008e8b590113fe63922658aa7c 228 SUPERFAMILY SSF48452 79 127 2.23E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS09690 ee0246008e8b590113fe63922658aa7c 228 Pfam PF09976 Tetratricopeptide repeat-like domain 15 212 7.8E-47 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain CYCME_RS09690 ee0246008e8b590113fe63922658aa7c 228 PANTHER PTHR38035 2 213 2.3E-45 T 23-04-2016 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 SUPERFAMILY SSF51419 27 282 2.04E-78 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 Gene3D G3DSA:3.20.20.10 36 266 1.8E-79 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PANTHER PTHR11482:SF5 1 419 1.1E-175 T 23-04-2016 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 412 41.301 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 2.3E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 2.3E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 2.3E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 2.3E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 2.3E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PANTHER PTHR11482 1 419 1.1E-175 T 23-04-2016 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 285 389 4.8E-19 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 Gene3D G3DSA:2.40.37.10 267 414 3.0E-48 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 280 3.7E-72 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 1.3E-27 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 1.3E-27 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 1.3E-27 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 1.3E-27 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 SUPERFAMILY SSF50621 253 413 5.65E-54 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS01755 f8fb9df5b0db0099224b49569310c9c3 423 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 411 7.1E-161 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS02885 8222bd347b2948b1d4057221cb7c8c56 217 PANTHER PTHR18901:SF7 1 196 4.1E-80 T 23-04-2016 CYCME_RS02885 8222bd347b2948b1d4057221cb7c8c56 217 Gene3D G3DSA:3.40.50.1000 6 198 7.5E-27 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS02885 8222bd347b2948b1d4057221cb7c8c56 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 188 2.3E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS02885 8222bd347b2948b1d4057221cb7c8c56 217 PANTHER PTHR18901 1 196 4.1E-80 T 23-04-2016 CYCME_RS02885 8222bd347b2948b1d4057221cb7c8c56 217 SUPERFAMILY SSF56784 1 214 1.17E-35 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS02885 8222bd347b2948b1d4057221cb7c8c56 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 188 1.7E-15 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 1.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PRINTS PR00834 HtrA/DegQ protease family signature 122 142 1.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PRINTS PR00834 HtrA/DegQ protease family signature 101 113 1.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PRINTS PR00834 HtrA/DegQ protease family signature 196 213 1.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PRINTS PR00834 HtrA/DegQ protease family signature 162 186 1.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PRINTS PR00834 HtrA/DegQ protease family signature 304 316 1.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PANTHER PTHR22939 74 400 3.7E-132 T 23-04-2016 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PANTHER PTHR22939 23 50 3.7E-132 T 23-04-2016 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 Gene3D G3DSA:2.40.10.10 28 153 1.3E-37 T 23-04-2016 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PANTHER PTHR22939:SF98 74 400 3.7E-132 T 23-04-2016 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 PANTHER PTHR22939:SF98 23 50 3.7E-132 T 23-04-2016 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 Gene3D G3DSA:2.40.10.10 154 265 3.3E-44 T 23-04-2016 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 Pfam PF13180 PDZ domain 264 355 6.4E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 Pfam PF13180 PDZ domain 378 457 6.8E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 Gene3D G3DSA:2.30.42.10 377 463 6.0E-19 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 Gene3D G3DSA:2.30.42.10 266 362 2.8E-30 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 28 462 1.6E-153 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 SUPERFAMILY SSF50494 26 256 3.47E-68 T 23-04-2016 IPR009003 Peptidase S1, PA clan CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 SUPERFAMILY SSF50156 377 463 3.29E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 SUPERFAMILY SSF50156 222 346 9.07E-26 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 Pfam PF13365 Trypsin-like peptidase domain 92 225 7.3E-35 T 23-04-2016 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 SMART SM00228 264 346 6.3E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07400 f09ac570ec6a03030bcd0abecf300f53 465 SMART SM00228 376 456 3.0E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.3E-99 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 SUPERFAMILY SSF52313 6 232 1.7E-92 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 Gene3D G3DSA:3.40.50.10490 23 99 3.6E-65 T 23-04-2016 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 Gene3D G3DSA:3.40.50.10490 158 247 3.6E-65 T 23-04-2016 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.498 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 Gene3D G3DSA:1.10.287.610 100 152 7.4E-23 T 23-04-2016 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.4E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.4E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.4E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.4E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.4E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.4E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 PANTHER PTHR12534 1 230 1.0E-111 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CYCME_RS07705 414d0b9bf991abcd97336c4a78c4b7a3 265 Pfam PF00318 Ribosomal protein S2 9 224 2.4E-93 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 2.3E-172 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 PANTHER PTHR30108:SF1 1 488 7.5E-257 T 23-04-2016 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 9.2E-174 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 Gene3D G3DSA:1.20.5.570 455 487 1.9E-14 T 23-04-2016 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 SUPERFAMILY SSF143968 323 487 2.62E-64 T 23-04-2016 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 70.637 T 23-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 PANTHER PTHR30108 1 488 7.5E-257 T 23-04-2016 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 SUPERFAMILY SSF50475 3 322 1.18E-127 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CYCME_RS01680 a0c9cd00182215b041a7d9b0e20cb8b1 488 Gene3D G3DSA:3.40.1670.10 337 454 9.3E-54 T 23-04-2016 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 PIRSF PIRSF001400 1 424 4.9E-189 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 SUPERFAMILY SSF54826 4 136 3.74E-53 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 Hamap MF_00318 Enolase [eno]. 2 410 44.25 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 SMART SM01192 138 424 2.9E-221 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 423 1.4E-133 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 PANTHER PTHR11902 1 420 6.6E-260 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 PRINTS PR00148 Enolase signature 160 173 6.3E-46 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 PRINTS PR00148 Enolase signature 310 321 6.3E-46 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 PRINTS PR00148 Enolase signature 37 51 6.3E-46 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 PRINTS PR00148 Enolase signature 333 347 6.3E-46 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 PRINTS PR00148 Enolase signature 107 123 6.3E-46 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 PRINTS PR00148 Enolase signature 362 379 6.3E-46 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 Gene3D G3DSA:3.30.390.10 4 125 1.0E-52 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 2.5E-205 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 Pfam PF03952 Enolase, N-terminal domain 4 134 6.8E-57 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 SMART SM01193 4 134 2.0E-90 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 Gene3D G3DSA:3.20.20.120 128 423 2.0E-134 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 SUPERFAMILY SSF51604 138 424 1.84E-130 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CYCME_RS07605 d98b03810a6cdedf226a6da822998f53 426 ProSitePatterns PS00164 Enolase signature. 333 346 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS02190 26693aa3081a8badcc0d7ad7730012a7 253 Pfam PF01061 ABC-2 type transporter 14 212 2.0E-15 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 CYCME_RS02190 26693aa3081a8badcc0d7ad7730012a7 253 PANTHER PTHR30413:SF8 5 252 2.0E-34 T 23-04-2016 CYCME_RS02190 26693aa3081a8badcc0d7ad7730012a7 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 9.8E-7 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS02190 26693aa3081a8badcc0d7ad7730012a7 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 170 189 9.8E-7 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS02190 26693aa3081a8badcc0d7ad7730012a7 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 28 49 9.8E-7 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS02190 26693aa3081a8badcc0d7ad7730012a7 253 PANTHER PTHR30413 5 252 2.0E-34 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Gene3D G3DSA:3.30.70.870 297 372 1.4E-25 T 23-04-2016 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Pfam PF00679 Elongation factor G C-terminus 402 487 4.1E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PANTHER PTHR23115 400 598 2.2E-282 T 23-04-2016 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 173 1.7E-16 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 SUPERFAMILY SSF54980 402 496 6.23E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 SUPERFAMILY SSF54980 297 373 7.19E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Gene3D G3DSA:2.40.30.10 196 292 2.8E-23 T 23-04-2016 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 4.9E-50 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Gene3D G3DSA:3.30.70.240 404 492 2.6E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PANTHER PTHR23115 8 376 2.2E-282 T 23-04-2016 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Pfam PF00009 Elongation factor Tu GTP binding domain 7 184 5.2E-49 T 23-04-2016 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 SUPERFAMILY SSF52540 6 208 1.04E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PANTHER PTHR23115:SF175 400 598 2.2E-282 T 23-04-2016 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 SUPERFAMILY SSF50447 168 291 1.37E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Gene3D G3DSA:3.40.50.300 7 195 1.5E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 SMART SM00838 401 489 0.0015 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PANTHER PTHR23115:SF175 8 376 2.2E-282 T 23-04-2016 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 299.452 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 Pfam PF03144 Elongation factor Tu domain 2 208 278 3.0E-7 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PRINTS PR00315 GTP-binding elongation factor signature 52 60 8.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 PRINTS PR00315 GTP-binding elongation factor signature 9 22 8.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS07395 f20d6dbc2c15ca891d8c57d70696e2c5 600 TIGRFAM TIGR01393 lepA: elongation factor 4 7 597 1.3E-296 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 412 573 2.1E-26 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 554 575 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 106 120 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 188 209 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 82 97 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 212 234 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 339 356 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 501 526 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 476 497 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01180 Arginine decarboxylase signature 162 177 2.3E-61 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 94 359 2.4E-35 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PANTHER PTHR11482 451 609 1.8E-197 T 23-04-2016 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PANTHER PTHR11482 17 380 1.8E-197 T 23-04-2016 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 114 132 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 Gene3D G3DSA:2.40.37.10 467 588 3.3E-15 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 Gene3D G3DSA:2.40.37.10 343 372 3.3E-15 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 Gene3D G3DSA:3.20.20.10 86 342 1.9E-41 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 SUPERFAMILY SSF51419 84 361 1.68E-57 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 SUPERFAMILY SSF50621 471 575 2.72E-5 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PIRSF PIRSF001336 7 650 2.1E-241 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PANTHER PTHR11482:SF36 451 609 1.8E-197 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PANTHER PTHR11482:SF36 17 380 1.8E-197 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 TIGRFAM TIGR01273 speA: arginine decarboxylase 20 647 1.1E-210 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 255 268 5.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 138 150 5.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 114 132 5.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 554 567 5.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS04800 062390e2cd5e3bffbe71550b006d5483 652 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 349 368 5.0E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 SMART SM00448 8 118 1.1E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 Pfam PF00072 Response regulator receiver domain 10 119 5.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 PANTHER PTHR26402 8 230 1.3E-101 T 23-04-2016 CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 Gene3D G3DSA:1.10.10.10 132 229 1.4E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 SMART SM00862 152 228 1.5E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 PANTHER PTHR26402:SF530 8 230 1.3E-101 T 23-04-2016 CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 SUPERFAMILY SSF46894 138 228 1.45E-24 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 SUPERFAMILY SSF52172 7 138 1.71E-39 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 Gene3D G3DSA:3.40.50.2300 5 126 3.4E-39 T 23-04-2016 CYCME_RS05625 4db1047c3c74ffb3b40210a639220760 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 1.2E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS03005 460f75b313e3c7a81b352ef218ffb065 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 2.0E-55 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS03005 460f75b313e3c7a81b352ef218ffb065 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 30.744 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS03005 460f75b313e3c7a81b352ef218ffb065 213 Gene3D G3DSA:3.40.50.2020 7 211 2.4E-73 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS03005 460f75b313e3c7a81b352ef218ffb065 213 Pfam PF00156 Phosphoribosyl transferase domain 66 154 7.8E-7 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CYCME_RS03005 460f75b313e3c7a81b352ef218ffb065 213 PANTHER PTHR19278:SF36 1 211 2.8E-101 T 23-04-2016 CYCME_RS03005 460f75b313e3c7a81b352ef218ffb065 213 SUPERFAMILY SSF53271 1 193 2.35E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS03005 460f75b313e3c7a81b352ef218ffb065 213 PANTHER PTHR19278 1 211 2.8E-101 T 23-04-2016 CYCME_RS07270 61b455028cbb4ee1dcd84c4a9850653d 192 SUPERFAMILY SSF52172 2 185 8.93E-34 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS07270 61b455028cbb4ee1dcd84c4a9850653d 192 Gene3D G3DSA:3.40.50.2300 2 123 1.5E-6 T 23-04-2016 CYCME_RS07270 61b455028cbb4ee1dcd84c4a9850653d 192 Pfam PF03861 ANTAR domain 133 185 7.9E-20 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 CYCME_RS07270 61b455028cbb4ee1dcd84c4a9850653d 192 SMART SM01012 130 185 5.8E-24 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 CYCME_RS07270 61b455028cbb4ee1dcd84c4a9850653d 192 PANTHER PTHR26402:SF567 3 191 6.3E-16 T 23-04-2016 CYCME_RS07270 61b455028cbb4ee1dcd84c4a9850653d 192 PIRSF PIRSF036382 1 192 5.6E-44 T 23-04-2016 IPR008327 Signal transduction response regulator, antiterminator CYCME_RS07270 61b455028cbb4ee1dcd84c4a9850653d 192 Gene3D G3DSA:1.10.10.10 134 191 8.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07270 61b455028cbb4ee1dcd84c4a9850653d 192 PANTHER PTHR26402 3 191 6.3E-16 T 23-04-2016 CYCME_RS01745 692b7f1e86fc13bdf293e411b0a30d7b 564 PANTHER PTHR30443 1 564 2.0E-212 T 23-04-2016 CYCME_RS01745 692b7f1e86fc13bdf293e411b0a30d7b 564 PANTHER PTHR30443:SF2 1 564 2.0E-212 T 23-04-2016 CYCME_RS01745 692b7f1e86fc13bdf293e411b0a30d7b 564 SUPERFAMILY SSF53649 229 531 1.29E-30 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CYCME_RS01745 692b7f1e86fc13bdf293e411b0a30d7b 564 Gene3D G3DSA:3.40.720.10 230 521 5.9E-20 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CYCME_RS01745 692b7f1e86fc13bdf293e411b0a30d7b 564 Pfam PF00884 Sulfatase 227 517 5.4E-43 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 PANTHER PTHR21266 24 221 1.3E-38 T 23-04-2016 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 Gene3D G3DSA:2.102.10.10 44 155 1.3E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 SUPERFAMILY SSF50022 12 166 1.96E-41 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 191 415 9.0E-12 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 Gene3D G3DSA:3.90.380.10 156 416 1.6E-48 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 PANTHER PTHR21266:SF30 24 221 1.3E-38 T 23-04-2016 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 SUPERFAMILY SSF55961 181 415 7.85E-41 T 23-04-2016 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 Pfam PF00355 Rieske [2Fe-2S] domain 43 130 1.2E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 150 176 8.9E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 8.9E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 188 210 8.9E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 8.9E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12420 fb8fb87eb63ff7d93124af3793684a7b 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 8.9E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS11845 d4e79daa7eeb5478c7623aa3bd9b7d5d 168 PANTHER PTHR38101:SF1 1 164 7.9E-51 T 23-04-2016 CYCME_RS11845 d4e79daa7eeb5478c7623aa3bd9b7d5d 168 Gene3D G3DSA:1.10.60.30 22 93 2.5E-21 T 23-04-2016 IPR023153 PSPTO4464-like domain CYCME_RS11845 d4e79daa7eeb5478c7623aa3bd9b7d5d 168 PIRSF PIRSF016183 1 168 1.4E-56 T 23-04-2016 IPR006839 Ribosome-associated, YjgA CYCME_RS11845 d4e79daa7eeb5478c7623aa3bd9b7d5d 168 Pfam PF04751 Protein of unknown function (DUF615) 12 162 9.7E-51 T 23-04-2016 IPR006839 Ribosome-associated, YjgA CYCME_RS11845 d4e79daa7eeb5478c7623aa3bd9b7d5d 168 SUPERFAMILY SSF158710 22 165 8.89E-47 T 23-04-2016 CYCME_RS11845 d4e79daa7eeb5478c7623aa3bd9b7d5d 168 PANTHER PTHR38101 1 164 7.9E-51 T 23-04-2016 CYCME_RS11845 d4e79daa7eeb5478c7623aa3bd9b7d5d 168 Gene3D G3DSA:1.10.60.30 97 167 1.2E-28 T 23-04-2016 IPR023153 PSPTO4464-like domain CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 SUPERFAMILY SSF55424 357 479 1.89E-32 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 21 339 5.7E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 Gene3D G3DSA:3.50.50.60 162 348 4.7E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 TIGRFAM TIGR02053 MerA: mercury(II) reductase 21 482 5.1E-164 T 23-04-2016 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 SUPERFAMILY SSF51905 19 71 1.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 SUPERFAMILY SSF51905 238 378 1.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 SUPERFAMILY SSF51905 129 210 1.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PANTHER PTHR22912:SF29 17 470 4.9E-119 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 55 65 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 Gene3D G3DSA:3.50.50.60 19 161 6.8E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PANTHER PTHR22912 17 470 4.9E-119 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PIRSF PIRSF000350 1 482 4.0E-243 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 213 228 1.2E-68 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 455 474 1.2E-68 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 390 410 1.2E-68 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 158 175 1.2E-68 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 193 210 1.2E-68 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 67 86 1.2E-68 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 31 49 1.2E-68 T 23-04-2016 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 358 464 8.0E-29 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS12235 7eef8dc7788433589c90f09a73562e09 482 Gene3D G3DSA:3.30.390.30 352 470 1.1E-37 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 SUPERFAMILY SSF55424 357 479 1.89E-32 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 21 339 5.7E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 Gene3D G3DSA:3.50.50.60 162 348 4.7E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 TIGRFAM TIGR02053 MerA: mercury(II) reductase 21 482 5.1E-164 T 23-04-2016 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 SUPERFAMILY SSF51905 19 71 1.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 SUPERFAMILY SSF51905 238 378 1.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 SUPERFAMILY SSF51905 129 210 1.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PANTHER PTHR22912:SF29 17 470 4.9E-119 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 55 65 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 Gene3D G3DSA:3.50.50.60 19 161 6.8E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PANTHER PTHR22912 17 470 4.9E-119 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PIRSF PIRSF000350 1 482 4.0E-243 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 213 228 1.2E-68 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 455 474 1.2E-68 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 390 410 1.2E-68 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 158 175 1.2E-68 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 193 210 1.2E-68 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 67 86 1.2E-68 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 PRINTS PR00945 Mercuric reductase class II signature 31 49 1.2E-68 T 23-04-2016 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 358 464 8.0E-29 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS01045 7eef8dc7788433589c90f09a73562e09 482 Gene3D G3DSA:3.30.390.30 352 470 1.1E-37 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 PIRSF PIRSF004491 1 312 1.2E-103 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 Pfam PF01687 Riboflavin kinase 183 306 3.1E-35 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 SUPERFAMILY SSF52374 17 174 3.56E-30 T 23-04-2016 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 Pfam PF06574 FAD synthetase 13 165 9.5E-51 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 PANTHER PTHR22749:SF0 1 312 2.9E-118 T 23-04-2016 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 Gene3D G3DSA:3.40.50.620 2 178 8.1E-58 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 SMART SM00904 182 307 4.6E-52 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 Gene3D G3DSA:2.40.30.30 179 309 6.9E-40 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 PANTHER PTHR22749 1 312 2.9E-118 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 SUPERFAMILY SSF82114 172 308 7.19E-41 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CYCME_RS09905 e181988e9933fd51316e4e373907c736 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.2E-90 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 PRINTS PR00502 NUDIX hydrolase family signature 31 45 5.5E-7 T 23-04-2016 IPR020476 NUDIX hydrolase CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 PRINTS PR00502 NUDIX hydrolase family signature 45 60 5.5E-7 T 23-04-2016 IPR020476 NUDIX hydrolase CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 Gene3D G3DSA:3.20.20.70 119 309 4.3E-41 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 SUPERFAMILY SSF51391 112 309 3.4E-42 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 Gene3D G3DSA:3.90.79.10 3 118 3.0E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 125 8.7E-35 T 23-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 SUPERFAMILY SSF55811 3 124 1.49E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 Pfam PF02581 Thiamine monophosphate synthase/TENI 130 308 4.2E-38 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 PANTHER PTHR22769 1 193 7.1E-33 T 23-04-2016 CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 Pfam PF14815 NUDIX domain 5 122 9.5E-17 T 23-04-2016 IPR029119 MutY, C-terminal CYCME_RS11060 156152c598331f44fe7e67c76df9da4e 311 PANTHER PTHR22769:SF36 1 193 7.1E-33 T 23-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CYCME_RS00650 9b2acda2cc3cd14094a65acd28c40729 101 PANTHER PTHR33215:SF4 2 99 4.0E-31 T 23-04-2016 CYCME_RS00650 9b2acda2cc3cd14094a65acd28c40729 101 SUPERFAMILY SSF46689 2 92 1.22E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS00650 9b2acda2cc3cd14094a65acd28c40729 101 Pfam PF01527 Transposase 3 73 3.7E-12 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS00650 9b2acda2cc3cd14094a65acd28c40729 101 PANTHER PTHR33215 2 99 4.0E-31 T 23-04-2016 CYCME_RS00650 9b2acda2cc3cd14094a65acd28c40729 101 Gene3D G3DSA:1.10.10.60 7 88 1.6E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 Gene3D G3DSA:3.30.70.1430 598 693 5.5E-5 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PANTHER PTHR32063:SF16 584 892 0.0 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 SUPERFAMILY SSF82866 896 1079 3.01E-41 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PANTHER PTHR32063 10 284 0.0 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PANTHER PTHR32063 584 892 0.0 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 SUPERFAMILY SSF82866 317 513 2.35E-34 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 SUPERFAMILY SSF82714 189 271 1.44E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 SUPERFAMILY SSF82693 48 142 9.94E-18 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PANTHER PTHR32063 300 564 0.0 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PANTHER PTHR32063 913 1081 0.0 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 Gene3D G3DSA:3.30.70.1430 50 148 1.1E-17 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 Gene3D G3DSA:3.30.2090.10 189 271 5.6E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 Gene3D G3DSA:3.30.2090.10 756 840 2.6E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PANTHER PTHR32063:SF16 300 564 0.0 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PANTHER PTHR32063:SF16 10 284 0.0 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 SUPERFAMILY SSF82693 289 344 3.66E-11 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 SUPERFAMILY SSF82693 142 188 3.66E-11 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 SUPERFAMILY SSF82693 593 693 1.17E-7 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 Gene3D G3DSA:1.20.1640.10 306 518 1.4E-41 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 2.6E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 2.6E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 2.6E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 2.6E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PRINTS PR00702 Acriflavin resistance protein family signature 580 597 2.6E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 2.6E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 PANTHER PTHR32063:SF16 913 1081 0.0 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 SUPERFAMILY SSF82714 756 841 2.35E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 Gene3D G3DSA:1.10.3850.10 849 1079 1.4E-61 T 23-04-2016 CYCME_RS09825 36df76cfa896de0c44904d896a613d37 1091 Pfam PF00873 AcrB/AcrD/AcrF family 21 1074 4.9E-148 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 Gene3D G3DSA:3.60.15.10 11 209 7.1E-53 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 SMART SM00849 10 170 1.2E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 PANTHER PTHR11935 13 213 4.9E-55 T 23-04-2016 CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 Gene3D G3DSA:3.40.250.10 237 346 1.6E-28 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 Pfam PF00581 Rhodanese-like domain 247 340 8.5E-16 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 SUPERFAMILY SSF52821 233 347 3.27E-29 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 Pfam PF00753 Metallo-beta-lactamase superfamily 12 170 1.2E-9 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 SMART SM00450 245 344 2.3E-22 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10820 a4bb3ee1ede65cf11315338926de737f 347 SUPERFAMILY SSF56281 12 212 3.36E-46 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 PANTHER PTHR11071:SF192 6 166 1.5E-63 T 23-04-2016 CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 8.1E-13 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 8.1E-13 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 8.1E-13 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 SUPERFAMILY SSF50891 4 166 4.24E-56 T 23-04-2016 IPR029000 Cyclophilin-like domain CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 Gene3D G3DSA:2.40.100.10 3 166 3.5E-52 T 23-04-2016 IPR029000 Cyclophilin-like domain CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 PIRSF PIRSF001467 1 167 1.3E-27 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 165 6.8E-48 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CYCME_RS07240 9509648a03c6c2422c79fdec95bb30d8 167 PANTHER PTHR11071 6 166 1.5E-63 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 SMART SM00936 268 358 7.4E-32 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 268 358 4.8E-23 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 Gene3D G3DSA:3.40.710.10 7 266 2.6E-98 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 SUPERFAMILY SSF56601 4 268 1.59E-86 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 23 248 6.9E-81 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 PANTHER PTHR21581 21 374 7.0E-111 T 23-04-2016 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 148 1.5E-16 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 55 66 1.5E-16 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 108 125 1.5E-16 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 Gene3D G3DSA:2.60.410.10 268 358 1.8E-26 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 SUPERFAMILY SSF69189 268 360 2.16E-23 T 23-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS03450 fda9ffd7c5750d58537ef351b31d76e7 374 PANTHER PTHR21581:SF3 21 374 7.0E-111 T 23-04-2016 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 Pfam PF00355 Rieske [2Fe-2S] domain 38 120 3.2E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 192 410 1.2E-16 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 Gene3D G3DSA:2.102.10.10 37 141 1.1E-32 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 95 115 3.0E-32 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 74 94 3.0E-32 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 23 48 3.0E-32 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 139 165 3.0E-32 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 53 68 3.0E-32 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 183 205 3.0E-32 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 Gene3D G3DSA:3.90.380.10 142 412 2.7E-53 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 81 104 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 PANTHER PTHR21266 20 367 5.9E-58 T 23-04-2016 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 PANTHER PTHR21266:SF30 20 367 5.9E-58 T 23-04-2016 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 SUPERFAMILY SSF50022 9 151 2.36E-44 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS05645 440847aeee5c6120a7155a6c13715f7f 416 SUPERFAMILY SSF55961 159 413 4.87E-40 T 23-04-2016 CYCME_RS00685 e8020a6bb9250555e6750aec6eac2d83 126 PANTHER PTHR24078 5 68 8.6E-17 T 23-04-2016 CYCME_RS00685 e8020a6bb9250555e6750aec6eac2d83 126 Pfam PF00226 DnaJ domain 6 68 8.0E-17 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS00685 e8020a6bb9250555e6750aec6eac2d83 126 Gene3D G3DSA:1.10.287.110 4 69 1.3E-18 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS00685 e8020a6bb9250555e6750aec6eac2d83 126 PRINTS PR00625 DnaJ domain signature 43 63 1.7E-11 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS00685 e8020a6bb9250555e6750aec6eac2d83 126 PRINTS PR00625 DnaJ domain signature 8 26 1.7E-11 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS00685 e8020a6bb9250555e6750aec6eac2d83 126 PRINTS PR00625 DnaJ domain signature 26 41 1.7E-11 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS00685 e8020a6bb9250555e6750aec6eac2d83 126 SUPERFAMILY SSF46565 3 80 1.31E-20 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS00685 e8020a6bb9250555e6750aec6eac2d83 126 SMART SM00271 5 63 6.2E-17 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS04350 0ee1397aad133c5d7ac840a24a3d2639 153 Pfam PF05233 PHB accumulation regulatory domain 70 109 3.4E-13 T 23-04-2016 IPR007897 PHB accumulation regulatory CYCME_RS04350 0ee1397aad133c5d7ac840a24a3d2639 153 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 5 110 2.1E-44 T 23-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR CYCME_RS04350 0ee1397aad133c5d7ac840a24a3d2639 153 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 6 65 7.3E-30 T 23-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 Gene3D G3DSA:3.90.230.10 163 420 1.2E-91 T 23-04-2016 IPR000994 Peptidase M24, structural domain CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 Pfam PF05195 Aminopeptidase P, N-terminal domain 3 109 4.6E-29 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 SMART SM01011 1 120 2.0E-41 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 PANTHER PTHR10804:SF17 3 418 5.2E-149 T 23-04-2016 CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 PANTHER PTHR10804 3 418 5.2E-149 T 23-04-2016 CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 SUPERFAMILY SSF55920 159 419 4.71E-88 T 23-04-2016 IPR000994 Peptidase M24, structural domain CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 332 344 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 Gene3D G3DSA:3.40.350.10 4 162 3.6E-43 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 SUPERFAMILY SSF53092 4 158 1.02E-44 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CYCME_RS02345 0d7e70fe3589f72c06b5266545faac7c 424 Pfam PF00557 Metallopeptidase family M24 166 397 3.5E-68 T 23-04-2016 IPR000994 Peptidase M24, structural domain CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 PANTHER PTHR11695:SF281 12 353 5.1E-84 T 23-04-2016 CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 PANTHER PTHR11695 12 353 5.1E-84 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 Pfam PF00107 Zinc-binding dehydrogenase 184 312 2.2E-19 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 142 6.5E-25 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 Gene3D G3DSA:3.40.50.720 177 294 1.6E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 SUPERFAMILY SSF51735 147 317 8.67E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 Gene3D G3DSA:3.90.180.10 1 176 1.2E-43 T 23-04-2016 IPR011032 GroES-like CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 SUPERFAMILY SSF50129 1 166 1.22E-43 T 23-04-2016 IPR011032 GroES-like CYCME_RS10335 58e2e7fcf19ea2ba1aba1fa2d47cc416 353 SMART SM00829 8 351 5.8E-4 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CYCME_RS07575 7a012b53a1666c09e41a6e4d3ccfcf5a 182 PANTHER PTHR35562 1 182 2.4E-36 T 23-04-2016 CYCME_RS07575 7a012b53a1666c09e41a6e4d3ccfcf5a 182 Pfam PF01713 Smr domain 98 179 5.4E-18 T 23-04-2016 IPR002625 Smr domain CYCME_RS07575 7a012b53a1666c09e41a6e4d3ccfcf5a 182 SMART SM00463 95 179 2.3E-6 T 23-04-2016 IPR002625 Smr domain CYCME_RS07575 7a012b53a1666c09e41a6e4d3ccfcf5a 182 SUPERFAMILY SSF160443 97 179 1.11E-15 T 23-04-2016 IPR002625 Smr domain CYCME_RS07575 7a012b53a1666c09e41a6e4d3ccfcf5a 182 PANTHER PTHR35562:SF2 1 182 2.4E-36 T 23-04-2016 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 219 1.4E-20 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 Gene3D G3DSA:1.10.540.10 1 119 7.9E-35 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 Gene3D G3DSA:2.40.110.10 122 222 4.7E-28 T 23-04-2016 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 SUPERFAMILY SSF47203 231 384 1.47E-45 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 SUPERFAMILY SSF56645 1 246 2.88E-63 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 Gene3D G3DSA:1.20.140.10 223 386 2.5E-53 T 23-04-2016 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 PANTHER PTHR10909:SF241 1 388 1.9E-237 T 23-04-2016 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.7E-26 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 366 3.1E-34 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS06075 31c8133174c9973a0953b1fef19d4819 388 PANTHER PTHR10909 1 388 1.9E-237 T 23-04-2016 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 PANTHER PTHR13789:SF214 6 391 2.6E-125 T 23-04-2016 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 Gene3D G3DSA:3.50.50.60 4 183 4.7E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 Gene3D G3DSA:3.50.50.60 269 354 4.7E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 SUPERFAMILY SSF51905 4 178 1.73E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 SUPERFAMILY SSF51905 268 382 1.73E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 9.5E-112 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.5E-17 T 23-04-2016 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.5E-17 T 23-04-2016 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.5E-17 T 23-04-2016 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.5E-17 T 23-04-2016 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 PANTHER PTHR13789 6 391 2.6E-125 T 23-04-2016 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 388 4.5E-122 T 23-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 CYCME_RS02350 d0cc1d9545aeabb8fe16918452a02ee5 399 Pfam PF01494 FAD binding domain 5 338 5.0E-27 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 CYCME_RS03375 765fde6380a6fdb054721b1f50ac64c8 253 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 23 233 1.6E-37 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 CYCME_RS03375 765fde6380a6fdb054721b1f50ac64c8 253 PIRSF PIRSF026326 3 245 2.7E-61 T 23-04-2016 IPR027023 Putative lipopolysaccharide kinase InaA CYCME_RS03375 765fde6380a6fdb054721b1f50ac64c8 253 SUPERFAMILY SSF56112 50 197 3.27E-6 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS00700 055b2913a8495f3609bfa8aea5613e5c 287 Gene3D G3DSA:1.10.10.10 246 281 9.9E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00700 055b2913a8495f3609bfa8aea5613e5c 287 PANTHER PTHR34322 2 211 1.0E-35 T 23-04-2016 CYCME_RS00700 055b2913a8495f3609bfa8aea5613e5c 287 PANTHER PTHR34322:SF1 2 211 1.0E-35 T 23-04-2016 CYCME_RS00700 055b2913a8495f3609bfa8aea5613e5c 287 SUPERFAMILY SSF143422 1 129 3.4E-26 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00700 055b2913a8495f3609bfa8aea5613e5c 287 SMART SM01321 9 123 1.5E-40 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00700 055b2913a8495f3609bfa8aea5613e5c 287 Pfam PF01797 Transposase IS200 like 13 120 3.4E-12 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00700 055b2913a8495f3609bfa8aea5613e5c 287 Gene3D G3DSA:3.30.70.1290 13 125 7.5E-14 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 PANTHER PTHR24567 4 226 9.2E-52 T 23-04-2016 CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 Gene3D G3DSA:1.10.10.10 156 228 6.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 ProSitePatterns PS00042 Crp-type HTH domain signature. 180 203 - T 23-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 PANTHER PTHR24567:SF28 4 226 9.2E-52 T 23-04-2016 CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 Gene3D G3DSA:2.60.120.10 4 155 2.2E-24 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 SMART SM00100 15 133 7.3E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 Pfam PF13545 Crp-like helix-turn-helix domain 153 226 3.2E-18 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 SUPERFAMILY SSF46785 151 228 1.01E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 SUPERFAMILY SSF51206 8 141 6.68E-23 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 209 6.6E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 178 194 6.6E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 Pfam PF00027 Cyclic nucleotide-binding domain 35 117 3.0E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS07865 e114a2618f26b3de9eddd9972c8c18ea 239 SMART SM00419 172 220 1.1E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 SUPERFAMILY SSF141868 429 629 4.45E-25 T 23-04-2016 IPR001633 EAL domain CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 7.2E-42 T 23-04-2016 IPR032244 LapD/MoxY, periplasmic domain CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 SUPERFAMILY SSF55073 242 393 1.26E-12 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 389 9.1E-12 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 Gene3D G3DSA:3.30.70.270 239 393 9.5E-15 T 23-04-2016 CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 SMART SM00267 223 394 9.5E-7 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 SMART SM00052 402 632 3.1E-6 T 23-04-2016 IPR001633 EAL domain CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 Pfam PF00563 EAL domain 414 629 3.9E-28 T 23-04-2016 IPR001633 EAL domain CYCME_RS01940 e943f7acea491b9ad28793053d9fa224 634 Gene3D G3DSA:3.20.20.450 414 629 1.2E-24 T 23-04-2016 IPR001633 EAL domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 842 856 2.7E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 870 2.7E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 895 2.7E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 901 914 2.7E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SUPERFAMILY SSF47384 658 742 1.28E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SMART SM00387 787 917 9.7E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SUPERFAMILY SSF55781 511 662 4.14E-9 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SMART SM00086 437 477 0.0019 T 23-04-2016 IPR001610 PAC motif CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Gene3D G3DSA:1.10.287.130 667 727 1.3E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SMART SM00388 673 741 2.8E-24 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Pfam PF00512 His Kinase A (phospho-acceptor) domain 673 741 5.0E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Gene3D G3DSA:3.30.450.20 350 475 9.1E-21 T 23-04-2016 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SUPERFAMILY SSF103190 36 183 1.26E-7 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 PANTHER PTHR24423 652 915 1.1E-96 T 23-04-2016 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 PANTHER PTHR24423 359 475 1.1E-96 T 23-04-2016 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 PANTHER PTHR24423 24 43 1.1E-96 T 23-04-2016 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Pfam PF00672 HAMP domain 278 342 5.7E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 359 483 1.3E-21 T 23-04-2016 IPR000014 PAS domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SUPERFAMILY SSF55874 730 916 2.75E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SMART SM00091 361 427 1.3E-5 T 23-04-2016 IPR000014 PAS domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Gene3D G3DSA:3.30.450.40 490 666 2.0E-9 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Gene3D G3DSA:3.30.565.10 728 917 2.5E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Gene3D G3DSA:3.30.450.20 92 177 5.3E-8 T 23-04-2016 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 788 916 1.4E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Pfam PF13426 PAS domain 373 475 6.6E-12 T 23-04-2016 IPR000014 PAS domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 Pfam PF02743 Cache domain 28 237 1.3E-13 T 23-04-2016 IPR033479 Double Cache domain 1 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SUPERFAMILY SSF55785 372 486 6.93E-25 T 23-04-2016 IPR000014 PAS domain CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SMART SM00304 297 350 8.4E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS10680 6d1840cdfefccf63b3a3361dabbe9850 926 SUPERFAMILY SSF158472 297 343 1.29E-5 T 23-04-2016 CYCME_RS03315 331e05a7895120dba0a7fec3d8fe8f28 330 PANTHER PTHR30160:SF7 1 330 1.1E-84 T 23-04-2016 CYCME_RS03315 331e05a7895120dba0a7fec3d8fe8f28 330 PANTHER PTHR30160 1 330 1.1E-84 T 23-04-2016 CYCME_RS03315 331e05a7895120dba0a7fec3d8fe8f28 330 Gene3D G3DSA:3.40.50.2000 1 128 1.5E-38 T 23-04-2016 CYCME_RS03315 331e05a7895120dba0a7fec3d8fe8f28 330 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 1 315 9.2E-129 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CYCME_RS03315 331e05a7895120dba0a7fec3d8fe8f28 330 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 58 301 4.4E-69 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CYCME_RS03315 331e05a7895120dba0a7fec3d8fe8f28 330 SUPERFAMILY SSF53756 1 316 1.36E-86 T 23-04-2016 CYCME_RS03315 331e05a7895120dba0a7fec3d8fe8f28 330 Gene3D G3DSA:3.40.50.2000 155 314 1.0E-55 T 23-04-2016 CYCME_RS12110 69a44eeabab362d46d4c1381b680b3de 209 Gene3D G3DSA:3.40.30.10 24 204 6.2E-58 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS12110 69a44eeabab362d46d4c1381b680b3de 209 SUPERFAMILY SSF52833 24 203 1.27E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS12110 69a44eeabab362d46d4c1381b680b3de 209 PIRSF PIRSF001488 1 209 1.3E-47 T 23-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CYCME_RS12110 69a44eeabab362d46d4c1381b680b3de 209 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CYCME_RS12110 69a44eeabab362d46d4c1381b680b3de 209 Pfam PF01323 DSBA-like thioredoxin domain 81 186 8.5E-13 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CYCME_RS12110 69a44eeabab362d46d4c1381b680b3de 209 PANTHER PTHR35891 1 209 2.0E-56 T 23-04-2016 CYCME_RS12110 69a44eeabab362d46d4c1381b680b3de 209 PANTHER PTHR35891:SF2 1 209 2.0E-56 T 23-04-2016 CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 SUPERFAMILY SSF160387 87 205 4.18E-38 T 23-04-2016 CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 PIRSF PIRSF001458 2 208 2.0E-68 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 SUPERFAMILY SSF46785 28 86 4.99E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 Gene3D G3DSA:1.10.10.10 32 82 1.0E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 Pfam PF12324 Helix-turn-helix domain of alkylmercury lyase 9 81 8.0E-16 T 23-04-2016 IPR024259 Alkylmercury lyase, helix-turn-helix domain CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 169 184 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 98 107 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 40 53 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 123 134 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 81 95 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS12240 ccc0ea0f615109e43852d551ff197f91 208 Pfam PF03243 Alkylmercury lyase 82 203 5.2E-39 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 SUPERFAMILY SSF160387 87 205 4.18E-38 T 23-04-2016 CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 PIRSF PIRSF001458 2 208 2.0E-68 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 SUPERFAMILY SSF46785 28 86 4.99E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 Gene3D G3DSA:1.10.10.10 32 82 1.0E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 Pfam PF12324 Helix-turn-helix domain of alkylmercury lyase 9 81 8.0E-16 T 23-04-2016 IPR024259 Alkylmercury lyase, helix-turn-helix domain CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 169 184 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 98 107 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 40 53 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 123 134 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 PRINTS PR01699 Organomercurial lyase signature 81 95 1.3E-19 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS01040 ccc0ea0f615109e43852d551ff197f91 208 Pfam PF03243 Alkylmercury lyase 82 203 5.2E-39 T 23-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 382 6.3E-13 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 455 2.9E-139 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 Gene3D G3DSA:3.40.1390.10 1 80 5.2E-25 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 SUPERFAMILY SSF53244 318 456 2.2E-31 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 Pfam PF08245 Mur ligase middle domain 105 298 3.3E-50 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 458 33.604 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 PANTHER PTHR23135:SF3 11 457 1.5E-157 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 SUPERFAMILY SSF53623 99 314 2.35E-56 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 Pfam PF01225 Mur ligase family, catalytic domain 25 92 5.8E-9 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 PANTHER PTHR23135 11 457 1.5E-157 T 23-04-2016 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 Gene3D G3DSA:3.90.190.20 318 458 3.2E-39 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 Gene3D G3DSA:3.40.1190.10 81 314 2.2E-71 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11140 72e3acd0630ea9cdbdb1ba71e63655ec 466 SUPERFAMILY SSF63418 1 95 1.19E-26 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 PANTHER PTHR11469 5 540 5.2E-208 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 263 281 3.4E-48 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 340 361 3.4E-48 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 146 165 3.4E-48 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 472 486 3.4E-48 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 472 3.4E-48 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 486 499 3.4E-48 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 42 513 37.539 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 486 503 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 Gene3D G3DSA:1.10.1390.10 496 535 1.6E-15 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 SUPERFAMILY SSF53697 5 534 1.7E-172 T 23-04-2016 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 Gene3D G3DSA:3.40.50.10490 295 495 2.5E-112 T 23-04-2016 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 Gene3D G3DSA:3.40.50.10490 6 94 2.5E-112 T 23-04-2016 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 Pfam PF00342 Phosphoglucose isomerase 48 529 2.8E-167 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 PANTHER PTHR11469:SF4 5 540 5.2E-208 T 23-04-2016 CYCME_RS02285 b3ef364288517e977e86d0736100774f 541 Gene3D G3DSA:3.40.50.10490 95 292 1.7E-59 T 23-04-2016 CYCME_RS08350 2f3bb5751a21627f71ae6531817c682b 166 Pfam PF02464 Competence-damaged protein 12 162 8.9E-56 T 23-04-2016 IPR008136 CinA, C-terminal CYCME_RS08350 2f3bb5751a21627f71ae6531817c682b 166 PANTHER PTHR13939 12 166 3.1E-65 T 23-04-2016 CYCME_RS08350 2f3bb5751a21627f71ae6531817c682b 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 18 162 1.4E-50 T 23-04-2016 IPR008136 CinA, C-terminal CYCME_RS08350 2f3bb5751a21627f71ae6531817c682b 166 SUPERFAMILY SSF142433 12 164 1.44E-53 T 23-04-2016 IPR008136 CinA, C-terminal CYCME_RS08350 2f3bb5751a21627f71ae6531817c682b 166 Gene3D G3DSA:3.90.950.20 11 165 1.6E-57 T 23-04-2016 IPR008136 CinA, C-terminal CYCME_RS06725 cabd5377da191433ca0a010667a3f237 282 PANTHER PTHR11820 1 281 8.5E-102 T 23-04-2016 CYCME_RS06725 cabd5377da191433ca0a010667a3f237 282 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 278 1.7E-63 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS06725 cabd5377da191433ca0a010667a3f237 282 PANTHER PTHR11820:SF71 1 281 8.5E-102 T 23-04-2016 CYCME_RS06725 cabd5377da191433ca0a010667a3f237 282 Gene3D G3DSA:3.90.850.10 65 279 2.9E-79 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS06725 cabd5377da191433ca0a010667a3f237 282 SUPERFAMILY SSF56529 62 279 1.96E-71 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 4.3E-63 T 23-04-2016 CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 SUPERFAMILY SSF51735 7 243 6.24E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PANTHER PTHR24322:SF635 151 183 1.0E-67 T 23-04-2016 CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PANTHER PTHR24322:SF635 10 135 1.0E-67 T 23-04-2016 CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PANTHER PTHR24322 151 183 1.0E-67 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PANTHER PTHR24322 10 135 1.0E-67 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 4.7E-98 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 Gene3D G3DSA:3.40.50.720 5 243 1.6E-82 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05385 b9fb4383838144d33d9f900f7568608c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.6E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS03325 79eea368c743f97f6aa918f45c7e8987 480 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 307 456 1.4E-8 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 CYCME_RS03325 79eea368c743f97f6aa918f45c7e8987 480 SUPERFAMILY SSF56112 48 177 1.02E-10 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS03325 79eea368c743f97f6aa918f45c7e8987 480 Gene3D G3DSA:1.10.510.10 388 437 4.9E-6 T 23-04-2016 CYCME_RS03325 79eea368c743f97f6aa918f45c7e8987 480 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 410 422 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CYCME_RS03325 79eea368c743f97f6aa918f45c7e8987 480 SUPERFAMILY SSF56112 286 437 3.96E-12 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 Gene3D G3DSA:1.10.8.60 317 393 2.8E-19 T 23-04-2016 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 SMART SM00448 5 116 1.5E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 Pfam PF00158 Sigma-54 interaction domain 144 311 1.8E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 SUPERFAMILY SSF52172 3 189 9.82E-44 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 PANTHER PTHR32071 8 469 1.5E-211 T 23-04-2016 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 Gene3D G3DSA:3.40.50.2300 4 139 3.0E-36 T 23-04-2016 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 SMART SM00382 164 311 3.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 SUPERFAMILY SSF46689 385 468 6.72E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 SUPERFAMILY SSF52540 143 387 6.19E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 Gene3D G3DSA:3.40.50.300 142 316 1.3E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 Pfam PF02954 Bacterial regulatory protein, Fis family 429 467 1.2E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 470 6.2E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 6.2E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 Gene3D G3DSA:1.10.10.60 404 468 1.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 8 467 7.5E-207 T 23-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 Pfam PF00072 Response regulator receiver domain 9 116 6.6E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS00145 d771d7b6d8955ba875d682ec9fc47854 470 PANTHER PTHR32071:SF15 8 469 1.5E-211 T 23-04-2016 CYCME_RS12480 c05d88f3c9279cef56d4ea38a38bf1a3 177 Gene3D G3DSA:3.10.450.50 3 177 2.0E-51 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS12480 c05d88f3c9279cef56d4ea38a38bf1a3 177 PANTHER PTHR41534 9 177 1.1E-23 T 23-04-2016 CYCME_RS12480 c05d88f3c9279cef56d4ea38a38bf1a3 177 SUPERFAMILY SSF54427 11 177 6.03E-44 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS12480 c05d88f3c9279cef56d4ea38a38bf1a3 177 Pfam PF00866 Ring hydroxylating beta subunit 26 168 3.7E-40 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS02665 803d1a377b471be649b71feddff4bcb7 206 Gene3D G3DSA:3.20.20.70 5 205 2.2E-63 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS02665 803d1a377b471be649b71feddff4bcb7 206 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 206 24.053 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CYCME_RS02665 803d1a377b471be649b71feddff4bcb7 206 PANTHER PTHR20857:SF15 9 206 6.7E-53 T 23-04-2016 CYCME_RS02665 803d1a377b471be649b71feddff4bcb7 206 SUPERFAMILY SSF51391 7 203 2.88E-59 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CYCME_RS02665 803d1a377b471be649b71feddff4bcb7 206 PANTHER PTHR20857 9 206 6.7E-53 T 23-04-2016 CYCME_RS02665 803d1a377b471be649b71feddff4bcb7 206 Pfam PF02581 Thiamine monophosphate synthase/TENI 9 189 5.9E-56 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CYCME_RS02665 803d1a377b471be649b71feddff4bcb7 206 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 200 4.5E-56 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 147 173 2.8E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 55 70 2.8E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 2.8E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 76 96 2.8E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 185 207 2.8E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 SUPERFAMILY SSF50022 10 163 9.04E-41 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 Pfam PF00355 Rieske [2Fe-2S] domain 41 126 5.4E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 Gene3D G3DSA:2.102.10.10 41 153 6.9E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 Gene3D G3DSA:3.90.380.10 154 416 1.9E-47 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 PANTHER PTHR21266:SF30 22 218 5.7E-36 T 23-04-2016 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 SUPERFAMILY SSF55961 163 416 1.02E-41 T 23-04-2016 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 PANTHER PTHR21266 22 218 5.7E-36 T 23-04-2016 CYCME_RS12400 a7303733a3fbdb210964b8bc88d78404 417 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 197 415 1.1E-14 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 SUPERFAMILY SSF48150 1 209 1.08E-69 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 SMART SM00478 38 185 5.9E-52 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 5.4E-17 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 PANTHER PTHR10359 5 210 6.9E-87 T 23-04-2016 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 SMART SM00525 186 206 8.7E-5 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 Gene3D G3DSA:1.10.1670.10 123 208 4.2E-34 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 Gene3D G3DSA:1.10.340.30 23 122 2.2E-35 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 PIRSF PIRSF001435 1 210 1.7E-54 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 PANTHER PTHR10359:SF18 5 210 6.9E-87 T 23-04-2016 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.08 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 7.7E-10 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.0E-83 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CYCME_RS02880 fd79d65dcb83b49880a3812fb7070011 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 3.4E-5 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CYCME_RS11910 b7191afdc5720aca1a6eeffc9db70ff3 270 Pfam PF12849 PBP superfamily domain 31 248 4.5E-27 T 23-04-2016 IPR024370 PBP domain CYCME_RS11910 b7191afdc5720aca1a6eeffc9db70ff3 270 SUPERFAMILY SSF53850 29 257 6.16E-28 T 23-04-2016 CYCME_RS11910 b7191afdc5720aca1a6eeffc9db70ff3 270 PANTHER PTHR37945 7 270 2.8E-94 T 23-04-2016 CYCME_RS11910 b7191afdc5720aca1a6eeffc9db70ff3 270 Gene3D G3DSA:3.40.190.10 219 257 1.9E-13 T 23-04-2016 CYCME_RS11910 b7191afdc5720aca1a6eeffc9db70ff3 270 Gene3D G3DSA:3.40.190.10 36 117 1.9E-13 T 23-04-2016 CYCME_RS11910 b7191afdc5720aca1a6eeffc9db70ff3 270 Gene3D G3DSA:3.40.190.10 118 218 2.5E-41 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 SUPERFAMILY SSF82866 834 1058 3.4E-56 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 SUPERFAMILY SSF82693 143 186 2.41E-13 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 SUPERFAMILY SSF82693 283 341 2.41E-13 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PANTHER PTHR32063:SF24 2 433 0.0 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PANTHER PTHR32063:SF24 459 1062 0.0 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 SUPERFAMILY SSF82714 752 836 9.16E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 Gene3D G3DSA:3.30.2090.10 187 274 2.6E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 Gene3D G3DSA:3.30.2090.10 752 837 4.0E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 1.1E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PRINTS PR00702 Acriflavin resistance protein family signature 348 371 1.1E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.1E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 1.1E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PRINTS PR00702 Acriflavin resistance protein family signature 650 664 1.1E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PRINTS PR00702 Acriflavin resistance protein family signature 580 597 1.1E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 SUPERFAMILY SSF82693 595 694 2.38E-8 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 SUPERFAMILY SSF82714 187 274 1.44E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 Pfam PF00873 AcrB/AcrD/AcrF family 5 1056 3.1E-275 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 Gene3D G3DSA:1.10.3850.10 842 1058 4.7E-61 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1060 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 SUPERFAMILY SSF82693 43 129 3.14E-20 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PANTHER PTHR32063 2 433 0.0 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 PANTHER PTHR32063 459 1062 0.0 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 Gene3D G3DSA:3.30.70.1430 596 694 4.1E-5 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 Gene3D G3DSA:1.20.1640.10 303 542 4.8E-59 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 SUPERFAMILY SSF82866 308 535 1.18E-43 T 23-04-2016 CYCME_RS06580 aa8ca36564245ed0593cb70558364c55 1063 Gene3D G3DSA:3.30.70.1430 42 143 5.5E-24 T 23-04-2016 CYCME_RS09010 3a49d08676dafc2d11002cab08f6d53b 229 Pfam PF00814 Glycoprotease family 29 149 1.6E-29 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS09010 3a49d08676dafc2d11002cab08f6d53b 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 217 3.0E-58 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 CYCME_RS09010 3a49d08676dafc2d11002cab08f6d53b 229 SUPERFAMILY SSF53067 109 215 8.16E-20 T 23-04-2016 CYCME_RS09010 3a49d08676dafc2d11002cab08f6d53b 229 PANTHER PTHR11735 1 133 3.5E-45 T 23-04-2016 CYCME_RS09010 3a49d08676dafc2d11002cab08f6d53b 229 PANTHER PTHR11735:SF11 1 133 3.5E-45 T 23-04-2016 CYCME_RS09010 3a49d08676dafc2d11002cab08f6d53b 229 SUPERFAMILY SSF53067 1 101 5.18E-28 T 23-04-2016 CYCME_RS09010 3a49d08676dafc2d11002cab08f6d53b 229 Gene3D G3DSA:3.30.420.40 1 132 2.0E-40 T 23-04-2016 CYCME_RS05435 80b68cda48178032894e6391450a64df 537 PANTHER PTHR13696 1 270 3.0E-76 T 23-04-2016 CYCME_RS05435 80b68cda48178032894e6391450a64df 537 PANTHER PTHR13696:SF3 1 270 3.0E-76 T 23-04-2016 CYCME_RS05435 80b68cda48178032894e6391450a64df 537 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 21 200 3.3E-24 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CYCME_RS05435 80b68cda48178032894e6391450a64df 537 SUPERFAMILY SSF52540 17 265 2.73E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05435 80b68cda48178032894e6391450a64df 537 Gene3D G3DSA:3.40.50.300 17 258 1.9E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06255 11733b1b55e0f92de510f52fc6e5f0b4 265 SUPERFAMILY SSF53098 104 259 1.13E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS06255 11733b1b55e0f92de510f52fc6e5f0b4 265 Pfam PF13683 Integrase core domain 193 258 1.0E-25 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS06255 11733b1b55e0f92de510f52fc6e5f0b4 265 Gene3D G3DSA:3.30.420.10 104 258 2.7E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS06255 11733b1b55e0f92de510f52fc6e5f0b4 265 PANTHER PTHR32552 35 258 2.9E-65 T 23-04-2016 CYCME_RS06255 11733b1b55e0f92de510f52fc6e5f0b4 265 PANTHER PTHR32552:SF26 35 258 2.9E-65 T 23-04-2016 CYCME_RS07140 11733b1b55e0f92de510f52fc6e5f0b4 265 SUPERFAMILY SSF53098 104 259 1.13E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07140 11733b1b55e0f92de510f52fc6e5f0b4 265 Pfam PF13683 Integrase core domain 193 258 1.0E-25 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS07140 11733b1b55e0f92de510f52fc6e5f0b4 265 Gene3D G3DSA:3.30.420.10 104 258 2.7E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07140 11733b1b55e0f92de510f52fc6e5f0b4 265 PANTHER PTHR32552 35 258 2.9E-65 T 23-04-2016 CYCME_RS07140 11733b1b55e0f92de510f52fc6e5f0b4 265 PANTHER PTHR32552:SF26 35 258 2.9E-65 T 23-04-2016 CYCME_RS07100 11733b1b55e0f92de510f52fc6e5f0b4 265 SUPERFAMILY SSF53098 104 259 1.13E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07100 11733b1b55e0f92de510f52fc6e5f0b4 265 Pfam PF13683 Integrase core domain 193 258 1.0E-25 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS07100 11733b1b55e0f92de510f52fc6e5f0b4 265 Gene3D G3DSA:3.30.420.10 104 258 2.7E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07100 11733b1b55e0f92de510f52fc6e5f0b4 265 PANTHER PTHR32552 35 258 2.9E-65 T 23-04-2016 CYCME_RS07100 11733b1b55e0f92de510f52fc6e5f0b4 265 PANTHER PTHR32552:SF26 35 258 2.9E-65 T 23-04-2016 CYCME_RS07120 11733b1b55e0f92de510f52fc6e5f0b4 265 SUPERFAMILY SSF53098 104 259 1.13E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07120 11733b1b55e0f92de510f52fc6e5f0b4 265 Pfam PF13683 Integrase core domain 193 258 1.0E-25 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS07120 11733b1b55e0f92de510f52fc6e5f0b4 265 Gene3D G3DSA:3.30.420.10 104 258 2.7E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07120 11733b1b55e0f92de510f52fc6e5f0b4 265 PANTHER PTHR32552 35 258 2.9E-65 T 23-04-2016 CYCME_RS07120 11733b1b55e0f92de510f52fc6e5f0b4 265 PANTHER PTHR32552:SF26 35 258 2.9E-65 T 23-04-2016 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 68.059 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 SUPERFAMILY SSF52304 4 146 1.57E-59 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 PANTHER PTHR21272 1 150 2.3E-80 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 6 141 3.0E-49 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 140 4.6E-58 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 Pfam PF01220 Dehydroquinase class II 4 139 9.8E-57 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 PIRSF PIRSF001399 1 146 9.7E-58 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS02945 f6b40f047a833f9b11342e6d92ce47b8 150 Gene3D G3DSA:3.40.50.9100 4 145 1.3E-62 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 Gene3D G3DSA:3.40.50.300 1 212 2.1E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 SMART SM00487 20 223 1.5E-62 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 PANTHER PTHR24031 1 371 3.6E-190 T 23-04-2016 CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 Pfam PF00270 DEAD/DEAH box helicase 25 197 5.1E-53 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 SUPERFAMILY SSF52540 75 358 1.87E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 436 48.511 T 23-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 PANTHER PTHR24031:SF0 1 371 3.6E-190 T 23-04-2016 CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 Gene3D G3DSA:3.40.50.300 213 374 2.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 Pfam PF00271 Helicase conserved C-terminal domain 235 340 2.0E-26 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 SMART SM00490 259 340 1.1E-31 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS09735 143c22863108755d14191b8e991b4df0 442 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CYCME_RS00845 748f13b287c31bdb3fb42ba1c8170ebc 212 Pfam PF00551 Formyl transferase 6 181 9.9E-57 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS00845 748f13b287c31bdb3fb42ba1c8170ebc 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 187 30.28 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CYCME_RS00845 748f13b287c31bdb3fb42ba1c8170ebc 212 SUPERFAMILY SSF53328 6 200 8.77E-63 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS00845 748f13b287c31bdb3fb42ba1c8170ebc 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 190 9.1E-71 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CYCME_RS00845 748f13b287c31bdb3fb42ba1c8170ebc 212 Gene3D G3DSA:3.40.50.170 6 201 4.4E-66 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS00845 748f13b287c31bdb3fb42ba1c8170ebc 212 PANTHER PTHR10520 5 193 5.4E-92 T 23-04-2016 CYCME_RS05610 362fb0e7677842fd7fed68361b4afe62 77 Gene3D G3DSA:3.40.50.720 10 74 1.0E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05610 362fb0e7677842fd7fed68361b4afe62 77 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 73 7.4E-12 T 23-04-2016 CYCME_RS05610 362fb0e7677842fd7fed68361b4afe62 77 SUPERFAMILY SSF51735 11 74 6.27E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS03935 37c758fa8b9c960d209c5901e053a7ed 109 PANTHER PTHR21043 5 107 2.6E-36 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CYCME_RS03935 37c758fa8b9c960d209c5901e053a7ed 109 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 104 24.212 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CYCME_RS03935 37c758fa8b9c960d209c5901e053a7ed 109 Pfam PF02410 Ribosomal silencing factor during starvation 8 103 4.7E-27 T 23-04-2016 CYCME_RS03935 37c758fa8b9c960d209c5901e053a7ed 109 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 6 103 9.4E-36 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CYCME_RS03935 37c758fa8b9c960d209c5901e053a7ed 109 Gene3D G3DSA:3.30.460.10 3 104 6.4E-37 T 23-04-2016 CYCME_RS03935 37c758fa8b9c960d209c5901e053a7ed 109 SUPERFAMILY SSF81301 3 104 9.65E-37 T 23-04-2016 CYCME_RS07590 411128a8dcebc095d177fc783cf12a7d 158 Pfam PF02542 YgbB family 1 154 3.0E-65 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07590 411128a8dcebc095d177fc783cf12a7d 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07590 411128a8dcebc095d177fc783cf12a7d 158 Gene3D G3DSA:3.30.1330.50 1 156 1.9E-68 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07590 411128a8dcebc095d177fc783cf12a7d 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 2.4E-65 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07590 411128a8dcebc095d177fc783cf12a7d 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 35.017 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07590 411128a8dcebc095d177fc783cf12a7d 158 SUPERFAMILY SSF69765 1 156 1.57E-63 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07590 411128a8dcebc095d177fc783cf12a7d 158 PANTHER PTHR32125 1 152 1.4E-49 T 23-04-2016 CYCME_RS06865 2f4cf598d10fa68c60215f81a9d71c08 312 Pfam PF01757 Acyltransferase family 2 293 4.2E-22 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 CYCME_RS06865 2f4cf598d10fa68c60215f81a9d71c08 312 PANTHER PTHR23028 2 312 5.6E-28 T 23-04-2016 CYCME_RS06865 2f4cf598d10fa68c60215f81a9d71c08 312 PANTHER PTHR23028:SF53 2 312 5.6E-28 T 23-04-2016 CYCME_RS05600 00d8c1a50e440b6a68244d9442d38d11 246 PANTHER PTHR37946 4 243 4.3E-42 T 23-04-2016 CYCME_RS05600 00d8c1a50e440b6a68244d9442d38d11 246 SUPERFAMILY SSF53474 33 234 1.03E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS05600 00d8c1a50e440b6a68244d9442d38d11 246 Pfam PF12146 Serine aminopeptidase, S33 34 157 1.6E-8 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 CYCME_RS05600 00d8c1a50e440b6a68244d9442d38d11 246 Gene3D G3DSA:3.40.50.1820 35 241 1.7E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS07165 d8f2653350125792e243784cf6a95a7f 185 Pfam PF10531 SLBB domain 105 152 1.6E-6 T 23-04-2016 IPR019554 Soluble ligand binding domain CYCME_RS07165 d8f2653350125792e243784cf6a95a7f 185 PANTHER PTHR33619 28 185 1.2E-42 T 23-04-2016 CYCME_RS07165 d8f2653350125792e243784cf6a95a7f 185 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 97 2.2E-20 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CYCME_RS07165 d8f2653350125792e243784cf6a95a7f 185 Gene3D G3DSA:3.30.1950.10 32 95 3.6E-19 T 23-04-2016 CYCME_RS07165 d8f2653350125792e243784cf6a95a7f 185 Gene3D G3DSA:3.10.560.10 96 185 1.2E-19 T 23-04-2016 CYCME_RS12325 f65dba29443ee24ec5d83ca981140896 282 PANTHER PTHR33375 25 278 1.5E-88 T 23-04-2016 CYCME_RS12325 f65dba29443ee24ec5d83ca981140896 282 SMART SM00470 29 119 1.3E-33 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CYCME_RS12325 f65dba29443ee24ec5d83ca981140896 282 Gene3D G3DSA:3.90.1530.10 25 125 7.5E-39 T 23-04-2016 CYCME_RS12325 f65dba29443ee24ec5d83ca981140896 282 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 198 2.0E-55 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CYCME_RS12325 f65dba29443ee24ec5d83ca981140896 282 SUPERFAMILY SSF110849 29 160 1.1E-31 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CYCME_RS12325 f65dba29443ee24ec5d83ca981140896 282 Pfam PF02195 ParB-like nuclease domain 30 119 4.8E-26 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CYCME_RS02240 0fc3146fd45d9e4a5d4b0792e5f22f7d 407 Gene3D G3DSA:3.40.640.10 40 266 5.6E-45 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS02240 0fc3146fd45d9e4a5d4b0792e5f22f7d 407 PANTHER PTHR30244 21 394 1.9E-59 T 23-04-2016 CYCME_RS02240 0fc3146fd45d9e4a5d4b0792e5f22f7d 407 PANTHER PTHR30244:SF9 21 394 1.9E-59 T 23-04-2016 CYCME_RS02240 0fc3146fd45d9e4a5d4b0792e5f22f7d 407 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 42 387 3.8E-67 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CYCME_RS02240 0fc3146fd45d9e4a5d4b0792e5f22f7d 407 Gene3D G3DSA:3.90.1150.10 271 388 2.4E-13 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS02240 0fc3146fd45d9e4a5d4b0792e5f22f7d 407 SUPERFAMILY SSF53383 38 388 3.39E-66 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS02240 0fc3146fd45d9e4a5d4b0792e5f22f7d 407 PIRSF PIRSF000390 23 393 2.4E-69 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CYCME_RS09215 eb7f8532a0d90c63590910cfd8341982 93 PANTHER PTHR33215:SF2 2 91 2.7E-30 T 23-04-2016 CYCME_RS09215 eb7f8532a0d90c63590910cfd8341982 93 Pfam PF01527 Transposase 3 81 5.6E-8 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS09215 eb7f8532a0d90c63590910cfd8341982 93 Gene3D G3DSA:1.10.10.60 9 91 1.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09215 eb7f8532a0d90c63590910cfd8341982 93 SUPERFAMILY SSF46689 4 91 1.65E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09215 eb7f8532a0d90c63590910cfd8341982 93 PANTHER PTHR33215 2 91 2.7E-30 T 23-04-2016 CYCME_RS08250 eb7f8532a0d90c63590910cfd8341982 93 PANTHER PTHR33215:SF2 2 91 2.7E-30 T 23-04-2016 CYCME_RS08250 eb7f8532a0d90c63590910cfd8341982 93 Pfam PF01527 Transposase 3 81 5.6E-8 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS08250 eb7f8532a0d90c63590910cfd8341982 93 Gene3D G3DSA:1.10.10.60 9 91 1.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS08250 eb7f8532a0d90c63590910cfd8341982 93 SUPERFAMILY SSF46689 4 91 1.65E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS08250 eb7f8532a0d90c63590910cfd8341982 93 PANTHER PTHR33215 2 91 2.7E-30 T 23-04-2016 CYCME_RS06970 eb7f8532a0d90c63590910cfd8341982 93 PANTHER PTHR33215:SF2 2 91 2.7E-30 T 23-04-2016 CYCME_RS06970 eb7f8532a0d90c63590910cfd8341982 93 Pfam PF01527 Transposase 3 81 5.6E-8 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS06970 eb7f8532a0d90c63590910cfd8341982 93 Gene3D G3DSA:1.10.10.60 9 91 1.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS06970 eb7f8532a0d90c63590910cfd8341982 93 SUPERFAMILY SSF46689 4 91 1.65E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS06970 eb7f8532a0d90c63590910cfd8341982 93 PANTHER PTHR33215 2 91 2.7E-30 T 23-04-2016 CYCME_RS08510 eb7f8532a0d90c63590910cfd8341982 93 PANTHER PTHR33215:SF2 2 91 2.7E-30 T 23-04-2016 CYCME_RS08510 eb7f8532a0d90c63590910cfd8341982 93 Pfam PF01527 Transposase 3 81 5.6E-8 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS08510 eb7f8532a0d90c63590910cfd8341982 93 Gene3D G3DSA:1.10.10.60 9 91 1.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS08510 eb7f8532a0d90c63590910cfd8341982 93 SUPERFAMILY SSF46689 4 91 1.65E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS08510 eb7f8532a0d90c63590910cfd8341982 93 PANTHER PTHR33215 2 91 2.7E-30 T 23-04-2016 CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 320 3.8E-26 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 PANTHER PTHR18968 4 553 4.4E-209 T 23-04-2016 CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 170 1.1E-38 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 Gene3D G3DSA:3.40.50.970 339 540 1.9E-54 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 Gene3D G3DSA:3.40.50.1220 187 338 8.7E-37 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 529 8.3E-37 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 SUPERFAMILY SSF52518 359 551 4.29E-55 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 PANTHER PTHR18968:SF12 4 553 4.4E-209 T 23-04-2016 CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 Gene3D G3DSA:3.40.50.970 4 171 4.0E-47 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 SUPERFAMILY SSF52518 5 173 6.73E-41 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS02795 c96c3886baa94ca68f2e5b845b7bf83b 581 SUPERFAMILY SSF52467 183 348 3.08E-38 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 Gene3D G3DSA:3.30.565.10 424 583 1.9E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 SMART SM01079 86 269 2.5E-52 T 23-04-2016 IPR006189 CHASE domain CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 SUPERFAMILY SSF55874 425 582 3.8E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 Gene3D G3DSA:1.10.287.130 362 423 1.0E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 Pfam PF00512 His Kinase A (phospho-acceptor) domain 369 434 2.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 PANTHER PTHR24423:SF502 366 582 6.2E-58 T 23-04-2016 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 PANTHER PTHR24423:SF502 1 11 6.2E-58 T 23-04-2016 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 583 2.1E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 1.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 581 1.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 562 1.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 Pfam PF03924 CHASE domain 90 262 4.9E-42 T 23-04-2016 IPR006189 CHASE domain CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 PANTHER PTHR24423 366 582 6.2E-58 T 23-04-2016 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 PANTHER PTHR24423 1 11 6.2E-58 T 23-04-2016 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 SMART SM00387 473 584 2.5E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 SMART SM00388 368 436 1.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS06775 5cc0696a4c56de210642cc60ae06530a 585 SUPERFAMILY SSF47384 353 437 1.31E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 18 309 34.549 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 SUPERFAMILY SSF52540 85 307 1.65E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 Gene3D G3DSA:1.10.40.50 248 308 1.5E-21 T 23-04-2016 CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 53 303 4.4E-76 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 PANTHER PTHR32120:SF2 3 303 4.3E-111 T 23-04-2016 CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 Pfam PF03193 Protein of unknown function, DUF258 72 246 1.7E-52 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 SUPERFAMILY SSF50249 18 76 3.08E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 Gene3D G3DSA:2.40.50.140 11 73 7.3E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 Gene3D G3DSA:3.40.50.300 85 245 8.2E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04415 c1dbbdc292439b6a9ac3ec49bc7f0289 309 PANTHER PTHR32120 3 303 4.3E-111 T 23-04-2016 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 Gene3D G3DSA:3.90.1280.10 239 295 2.9E-22 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 PANTHER PTHR30111 23 301 1.6E-66 T 23-04-2016 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 Hamap MF_00117 33 kDa chaperonin [hslO]. 22 297 29.587 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 PANTHER PTHR30111:SF1 23 301 1.6E-66 T 23-04-2016 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 SUPERFAMILY SSF64397 22 245 2.75E-68 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 Gene3D G3DSA:1.10.287.480 192 238 7.5E-20 T 23-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 Pfam PF01430 Hsp33 protein 23 286 2.2E-83 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 SUPERFAMILY SSF118352 238 295 7.32E-18 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 PIRSF PIRSF005261 13 298 1.0E-76 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CYCME_RS10030 c41d57c19b3e8b632805c7a3c221c0f6 306 Gene3D G3DSA:3.55.30.10 20 189 1.2E-57 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CYCME_RS07515 9115ab9ce8c2c4d4320acddaf8ab022e 73 PANTHER PTHR32319 5 73 6.8E-26 T 23-04-2016 CYCME_RS07515 9115ab9ce8c2c4d4320acddaf8ab022e 73 SUPERFAMILY SSF55174 1 68 1.44E-19 T 23-04-2016 CYCME_RS07515 9115ab9ce8c2c4d4320acddaf8ab022e 73 PANTHER PTHR32319:SF3 5 73 6.8E-26 T 23-04-2016 CYCME_RS07515 9115ab9ce8c2c4d4320acddaf8ab022e 73 Gene3D G3DSA:3.10.290.10 1 67 1.7E-27 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS07515 9115ab9ce8c2c4d4320acddaf8ab022e 73 Pfam PF13275 S4 domain 4 67 3.1E-25 T 23-04-2016 CYCME_RS09975 ad8551115e4d667e633cf4900fa8a085 138 Pfam PF06853 Protein of unknown function (DUF1249) 38 125 8.4E-14 T 23-04-2016 IPR009659 Protein of unknown function DUF1249 CYCME_RS12195 58b40c695b1af036f38813bde58b5f66 690 SUPERFAMILY SSF53098 262 405 2.43E-10 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS12195 58b40c695b1af036f38813bde58b5f66 690 Pfam PF09299 Mu transposase, C-terminal 494 559 5.9E-9 T 23-04-2016 IPR015378 Transposase-like, Mu, C-terminal CYCME_RS12195 58b40c695b1af036f38813bde58b5f66 690 Gene3D G3DSA:3.30.420.10 259 411 3.2E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS12195 58b40c695b1af036f38813bde58b5f66 690 Pfam PF00665 Integrase core domain 263 403 9.1E-18 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS01085 58b40c695b1af036f38813bde58b5f66 690 SUPERFAMILY SSF53098 262 405 2.43E-10 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS01085 58b40c695b1af036f38813bde58b5f66 690 Pfam PF09299 Mu transposase, C-terminal 494 559 5.9E-9 T 23-04-2016 IPR015378 Transposase-like, Mu, C-terminal CYCME_RS01085 58b40c695b1af036f38813bde58b5f66 690 Gene3D G3DSA:3.30.420.10 259 411 3.2E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS01085 58b40c695b1af036f38813bde58b5f66 690 Pfam PF00665 Integrase core domain 263 403 9.1E-18 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS04970 191c1756dc19ef070892f83b88c21aca 206 Pfam PF01728 FtsJ-like methyltransferase 28 203 2.3E-51 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CYCME_RS04970 191c1756dc19ef070892f83b88c21aca 206 Gene3D G3DSA:3.40.50.150 3 205 1.2E-65 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04970 191c1756dc19ef070892f83b88c21aca 206 PIRSF PIRSF005461 1 206 3.3E-74 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CYCME_RS04970 191c1756dc19ef070892f83b88c21aca 206 PANTHER PTHR10920:SF20 1 205 2.6E-106 T 23-04-2016 CYCME_RS04970 191c1756dc19ef070892f83b88c21aca 206 SUPERFAMILY SSF53335 5 205 3.9E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04970 191c1756dc19ef070892f83b88c21aca 206 PANTHER PTHR10920 1 205 2.6E-106 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CYCME_RS04970 191c1756dc19ef070892f83b88c21aca 206 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 27.814 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 Gene3D G3DSA:3.40.1110.10 453 566 1.1E-23 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 Gene3D G3DSA:3.40.50.1000 567 707 3.9E-55 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 Gene3D G3DSA:3.40.50.1000 409 452 3.9E-55 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 440 446 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 212 718 1.7E-84 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 169 748 7.3E-189 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 SUPERFAMILY SSF81653 238 336 8.63E-29 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 596 8.7E-29 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 452 8.7E-29 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 286 300 8.7E-29 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 674 8.7E-29 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 658 8.7E-29 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 575 8.7E-29 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 Pfam PF00702 haloacid dehalogenase-like hydrolase 434 653 1.7E-40 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 Gene3D G3DSA:2.70.150.10 168 336 2.2E-32 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 Gene3D G3DSA:3.30.70.100 17 77 1.9E-19 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00943 Copper-transporting ATPase signature 55 75 7.1E-10 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00943 Copper-transporting ATPase signature 226 244 7.1E-10 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00943 Copper-transporting ATPase signature 154 173 7.1E-10 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00943 Copper-transporting ATPase signature 359 373 7.1E-10 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PRINTS PR00943 Copper-transporting ATPase signature 616 633 7.1E-10 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PANTHER PTHR24093:SF319 1 749 9.7E-290 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 Pfam PF00403 Heavy-metal-associated domain 17 73 9.2E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 PANTHER PTHR24093 1 749 9.7E-290 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 Pfam PF00122 E1-E2 ATPase 207 429 3.1E-65 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 SUPERFAMILY SSF81665 204 240 2.35E-10 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 SUPERFAMILY SSF81665 337 432 2.35E-10 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 SUPERFAMILY SSF81665 688 715 2.35E-10 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 151 749 1.1E-184 T 23-04-2016 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 SUPERFAMILY SSF55008 10 80 6.94E-18 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 SUPERFAMILY SSF56784 438 456 5.17E-56 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS06440 ef70e6457d2f4e501066655c1c7e3bc3 756 SUPERFAMILY SSF56784 496 745 5.17E-56 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 PANTHER PTHR10029 5 768 0.0 T 23-04-2016 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 Pfam PF07503 HypF finger 109 142 5.4E-15 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 Pfam PF07503 HypF finger 159 191 1.9E-16 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 Gene3D G3DSA:3.30.70.100 7 91 3.7E-24 T 23-04-2016 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 PANTHER PTHR10029:SF4 5 768 0.0 T 23-04-2016 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 Pfam PF00708 Acylphosphatase 6 90 9.4E-22 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 Pfam PF01300 Telomere recombination 212 386 5.6E-48 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 PIRSF PIRSF006256 3 767 2.8E-277 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 Gene3D G3DSA:3.90.870.10 204 380 2.6E-40 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 10 759 7.0E-242 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 SUPERFAMILY SSF54975 4 92 5.67E-23 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CYCME_RS08725 ecde1f4c59ddc4e16f45a1e307cc11b2 772 SUPERFAMILY SSF55821 176 393 1.01E-43 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 SMART SM00400 36 90 2.2E-35 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Gene3D G3DSA:1.10.860.10 442 573 5.7E-32 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Pfam PF01807 CHC2 zinc finger 6 100 1.7E-39 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 SMART SM00766 450 573 8.9E-21 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 PANTHER PTHR30313 3 573 6.8E-148 T 23-04-2016 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Hamap MF_00974 DNA primase [dnaG]. 4 574 28.84 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 TIGRFAM TIGR01391 dnaG: DNA primase 4 418 1.7E-145 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Pfam PF08278 DNA primase DnaG DnaB-binding 451 572 6.6E-27 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 PIRSF PIRSF002811 2 574 1.7E-149 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Gene3D G3DSA:3.90.980.10 115 240 8.0E-46 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Pfam PF10410 DnaB-helicase binding domain of primase 370 423 1.2E-9 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 SUPERFAMILY SSF56731 115 422 1.54E-104 T 23-04-2016 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Pfam PF13662 Toprim domain 260 334 9.9E-17 T 23-04-2016 IPR006171 Toprim domain CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 251 2.3E-41 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Gene3D G3DSA:3.90.580.10 1 100 1.8E-40 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Gene3D G3DSA:3.40.1360.10 241 367 2.9E-44 T 23-04-2016 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 SMART SM00493 259 330 3.6E-16 T 23-04-2016 IPR006171 Toprim domain CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 SUPERFAMILY SSF117023 448 573 6.02E-27 T 23-04-2016 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 SUPERFAMILY SSF57783 4 97 5.44E-36 T 23-04-2016 CYCME_RS00510 620445c7c35d7826e65f22942ea6dc79 574 Gene3D G3DSA:1.20.50.20 368 422 5.0E-15 T 23-04-2016 CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.5E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 Gene3D G3DSA:3.30.70.20 4 103 2.0E-22 T 23-04-2016 CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 2.3E-19 T 23-04-2016 IPR022569 Ferredoxin, C-terminal CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.0E-16 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.0E-16 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.0E-16 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 PANTHER PTHR11938:SF101 1 85 1.9E-44 T 23-04-2016 CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 PANTHER PTHR11938 1 85 1.9E-44 T 23-04-2016 CYCME_RS03785 b93f0f39ca7addf3063f9c73c19b8f27 107 SUPERFAMILY SSF54862 3 101 1.02E-24 T 23-04-2016 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 Pfam PF00403 Heavy-metal-associated domain 27 85 2.3E-13 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 90 9.6E-42 T 23-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 Gene3D G3DSA:3.30.70.100 20 88 1.1E-17 T 23-04-2016 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 SUPERFAMILY SSF55008 18 88 8.64E-19 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 47 62 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 76 90 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 20 31 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 31 47 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 62 76 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS12225 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 2 20 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 Pfam PF00403 Heavy-metal-associated domain 27 85 2.3E-13 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 90 9.6E-42 T 23-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 Gene3D G3DSA:3.30.70.100 20 88 1.1E-17 T 23-04-2016 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 SUPERFAMILY SSF55008 18 88 8.64E-19 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 47 62 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 76 90 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 20 31 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 31 47 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 62 76 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS01055 50006fc5149a0dcb9dbb27e1885cf7b4 90 PRINTS PR00946 Mercury scavenger protein signature 2 20 1.8E-31 T 23-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CYCME_RS01655 ab09aa49b3caaa1a6221099a0e7625c4 190 Pfam PF04011 LemA family 10 186 8.9E-60 T 23-04-2016 IPR007156 LemA CYCME_RS01655 ab09aa49b3caaa1a6221099a0e7625c4 190 PANTHER PTHR34478 1 190 8.1E-74 T 23-04-2016 CYCME_RS01655 ab09aa49b3caaa1a6221099a0e7625c4 190 PANTHER PTHR34478:SF1 1 190 8.1E-74 T 23-04-2016 CYCME_RS01655 ab09aa49b3caaa1a6221099a0e7625c4 190 SUPERFAMILY SSF140478 26 175 5.1E-47 T 23-04-2016 IPR023353 LemA-like domain CYCME_RS01655 ab09aa49b3caaa1a6221099a0e7625c4 190 Gene3D G3DSA:1.20.1440.20 14 186 9.2E-54 T 23-04-2016 IPR023353 LemA-like domain CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 SUPERFAMILY SSF51735 3 136 3.71E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 PANTHER PTHR33303:SF3 2 691 5.1E-208 T 23-04-2016 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 Gene3D G3DSA:3.40.50.720 2 129 3.7E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 Gene3D G3DSA:3.40.50.261 293 449 9.7E-5 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 Pfam PF13549 ATP-grasp domain 478 689 5.9E-62 T 23-04-2016 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 157 294 4.2E-43 T 23-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 SUPERFAMILY SSF56059 479 690 4.42E-38 T 23-04-2016 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 SUPERFAMILY SSF52210 302 453 1.15E-21 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 Gene3D G3DSA:3.40.50.261 130 292 2.5E-24 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 PANTHER PTHR33303 2 691 5.1E-208 T 23-04-2016 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 Pfam PF13380 CoA binding domain 10 134 1.9E-22 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 Gene3D G3DSA:3.30.470.20 483 522 3.2E-6 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 SUPERFAMILY SSF52210 133 294 2.62E-34 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS05900 4a7dc8802077f338c5bbbec9374925f5 698 SMART SM00881 6 101 7.6E-36 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 532 1.1E-41 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 SUPERFAMILY SSF55785 139 243 1.73E-11 T 23-04-2016 IPR000014 PAS domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 SUPERFAMILY SSF141868 554 799 9.68E-67 T 23-04-2016 IPR001633 EAL domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 Pfam PF00563 EAL domain 555 792 1.9E-57 T 23-04-2016 IPR001633 EAL domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 Gene3D G3DSA:3.20.20.450 553 800 1.1E-68 T 23-04-2016 IPR001633 EAL domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 SMART SM00267 364 536 1.8E-56 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 Pfam PF13426 PAS domain 257 363 0.35 T 23-04-2016 IPR000014 PAS domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 Pfam PF13426 PAS domain 139 234 2.3E-5 T 23-04-2016 IPR000014 PAS domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 Gene3D G3DSA:3.30.450.20 128 231 4.7E-10 T 23-04-2016 CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 129 242 5.1E-6 T 23-04-2016 IPR000014 PAS domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 Gene3D G3DSA:3.30.70.270 376 539 1.3E-49 T 23-04-2016 CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 SMART SM00052 548 797 2.4E-62 T 23-04-2016 IPR001633 EAL domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 SMART SM00091 124 190 0.026 T 23-04-2016 IPR000014 PAS domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 SMART SM00091 247 316 30.0 T 23-04-2016 IPR000014 PAS domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 PANTHER PTHR33121:SF10 531 798 1.6E-58 T 23-04-2016 CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 SUPERFAMILY SSF55785 233 362 2.28E-6 T 23-04-2016 IPR000014 PAS domain CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 PANTHER PTHR33121 531 798 1.6E-58 T 23-04-2016 CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 Gene3D G3DSA:3.30.450.20 239 363 9.0E-7 T 23-04-2016 CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 SUPERFAMILY SSF55073 380 537 3.37E-45 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS05075 770933f559bf8224950b49f798cb9a69 809 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 535 5.4E-41 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS00755 ed429f3607f1c6009f1b8c8b143c1e08 151 PANTHER PTHR33507 1 151 4.5E-21 T 23-04-2016 CYCME_RS00755 ed429f3607f1c6009f1b8c8b143c1e08 151 Gene3D G3DSA:2.40.50.140 88 150 1.6E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS00755 ed429f3607f1c6009f1b8c8b143c1e08 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 150 9.4E-17 T 23-04-2016 IPR002810 NfeD-like, C-terminal domain CYCME_RS00755 ed429f3607f1c6009f1b8c8b143c1e08 151 PANTHER PTHR33507:SF3 1 151 4.5E-21 T 23-04-2016 CYCME_RS00755 ed429f3607f1c6009f1b8c8b143c1e08 151 SUPERFAMILY SSF141322 82 150 1.27E-6 T 23-04-2016 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 Pfam PF01926 50S ribosome-binding GTPase 162 285 6.2E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 Hamap MF_01454 GTPase Obg [obg]. 2 334 45.774 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 PANTHER PTHR11702 1 349 1.9E-151 T 23-04-2016 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 SUPERFAMILY SSF82051 2 158 7.06E-55 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 2.3E-137 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 PIRSF PIRSF002401 1 351 5.2E-131 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 Pfam PF01018 GTP1/OBG 3 158 6.4E-59 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 5.6E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 5.6E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 5.6E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 5.6E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 PANTHER PTHR11702:SF3 1 349 1.9E-151 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 SUPERFAMILY SSF52540 151 339 2.37E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 Gene3D G3DSA:2.70.210.12 2 156 3.2E-57 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 CYCME_RS09930 dd8d30b3ff746f6d4ab106cfed0dcbf2 351 Gene3D G3DSA:3.40.50.300 160 346 4.1E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04120 90935c7111d478e09027f4e37b4cb093 174 PANTHER PTHR38784 1 171 2.4E-70 T 23-04-2016 CYCME_RS04120 90935c7111d478e09027f4e37b4cb093 174 SUPERFAMILY SSF52980 5 169 1.77E-65 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CYCME_RS04120 90935c7111d478e09027f4e37b4cb093 174 Gene3D G3DSA:3.10.640.10 1 169 2.9E-72 T 23-04-2016 CYCME_RS04120 90935c7111d478e09027f4e37b4cb093 174 PANTHER PTHR38784:SF1 1 171 2.4E-70 T 23-04-2016 CYCME_RS04120 90935c7111d478e09027f4e37b4cb093 174 Pfam PF07152 YaeQ protein 1 166 6.1E-71 T 23-04-2016 IPR009822 YaeQ CYCME_RS04120 90935c7111d478e09027f4e37b4cb093 174 SMART SM01322 1 173 7.7E-94 T 23-04-2016 IPR009822 YaeQ CYCME_RS04120 90935c7111d478e09027f4e37b4cb093 174 PIRSF PIRSF011484 1 173 7.1E-63 T 23-04-2016 IPR009822 YaeQ CYCME_RS08105 3ad76b37fc013dc64011e9e627e40458 288 PANTHER PTHR10794 121 168 1.0E-11 T 23-04-2016 CYCME_RS08105 3ad76b37fc013dc64011e9e627e40458 288 PANTHER PTHR10794 199 236 1.0E-11 T 23-04-2016 CYCME_RS08105 3ad76b37fc013dc64011e9e627e40458 288 Pfam PF02517 CAAX protease self-immunity 116 231 4.5E-13 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 CYCME_RS08105 3ad76b37fc013dc64011e9e627e40458 288 PANTHER PTHR10794:SF59 121 168 1.0E-11 T 23-04-2016 CYCME_RS08105 3ad76b37fc013dc64011e9e627e40458 288 PANTHER PTHR10794:SF59 199 236 1.0E-11 T 23-04-2016 CYCME_RS03610 5f287fcf5e62a64b25e266b6a92d51cc 175 PANTHER PTHR11560 3 173 5.2E-51 T 23-04-2016 CYCME_RS03610 5f287fcf5e62a64b25e266b6a92d51cc 175 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 26.031 T 23-04-2016 IPR022973 Ribosomal protein L10 CYCME_RS03610 5f287fcf5e62a64b25e266b6a92d51cc 175 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 23-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03610 5f287fcf5e62a64b25e266b6a92d51cc 175 Pfam PF00466 Ribosomal protein L10 5 101 2.2E-24 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CYCME_RS03610 5f287fcf5e62a64b25e266b6a92d51cc 175 SUPERFAMILY SSF160369 4 171 3.66E-51 T 23-04-2016 CYCME_RS02315 09344b7bb83abcd4c7b0a97173e0dee2 567 SUPERFAMILY SSF52091 451 563 2.94E-17 T 23-04-2016 IPR002645 STAS domain CYCME_RS02315 09344b7bb83abcd4c7b0a97173e0dee2 567 TIGRFAM TIGR00815 sulP: sulfate permease 5 559 3.7E-144 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 CYCME_RS02315 09344b7bb83abcd4c7b0a97173e0dee2 567 Pfam PF01740 STAS domain 452 559 4.3E-22 T 23-04-2016 IPR002645 STAS domain CYCME_RS02315 09344b7bb83abcd4c7b0a97173e0dee2 567 PANTHER PTHR11814 5 567 9.4E-192 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 CYCME_RS02315 09344b7bb83abcd4c7b0a97173e0dee2 567 Pfam PF00916 Sulfate permease family 15 400 1.3E-106 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CYCME_RS02315 09344b7bb83abcd4c7b0a97173e0dee2 567 Gene3D G3DSA:3.30.750.24 452 564 2.6E-19 T 23-04-2016 IPR002645 STAS domain CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1285 20.749 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 SUPERFAMILY SSF56042 821 1026 3.44E-51 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1035 1284 1.2E-103 T 23-04-2016 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 Gene3D G3DSA:3.40.50.880 1036 1262 4.5E-11 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 Gene3D G3DSA:3.30.1330.10 644 806 1.3E-10 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 Gene3D G3DSA:3.30.1330.10 209 419 1.9E-36 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 SUPERFAMILY SSF52317 1033 1284 6.87E-93 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 5 1284 0.0 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 SMART SM01211 1035 1284 8.3E-149 T 23-04-2016 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 SUPERFAMILY SSF82697 1 150 5.75E-45 T 23-04-2016 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 PANTHER PTHR10099 1 1285 0.0 T 23-04-2016 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 SUPERFAMILY SSF56042 429 612 9.42E-48 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 Pfam PF02769 AIR synthase related protein, C-terminal domain 833 954 3.3E-10 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 Pfam PF02769 AIR synthase related protein, C-terminal domain 429 585 5.4E-26 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 PANTHER PTHR10099:SF5 1 1285 0.0 T 23-04-2016 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 SUPERFAMILY SSF55326 618 814 1.31E-61 T 23-04-2016 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 SUPERFAMILY SSF109736 154 218 2.48E-21 T 23-04-2016 CYCME_RS10735 9f48494a15ba750d5b81a9e4905bc087 1285 SUPERFAMILY SSF55326 219 425 1.85E-61 T 23-04-2016 CYCME_RS05245 0fce7ba0386890def82ecf64d71ca688 100 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 2 99 5.5E-34 T 23-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ CYCME_RS05245 0fce7ba0386890def82ecf64d71ca688 100 Gene3D G3DSA:2.60.40.10 1 100 1.8E-30 T 23-04-2016 IPR013783 Immunoglobulin-like fold CYCME_RS05245 0fce7ba0386890def82ecf64d71ca688 100 Pfam PF08770 Sulphur oxidation protein SoxZ 4 96 2.8E-31 T 23-04-2016 IPR014880 Sulphur oxidation protein SoxZ CYCME_RS05245 0fce7ba0386890def82ecf64d71ca688 100 SUPERFAMILY SSF81296 1 99 1.4E-25 T 23-04-2016 IPR014756 Immunoglobulin E-set CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 SUPERFAMILY SSF55781 24 191 1.91E-9 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 Gene3D G3DSA:3.30.450.40 22 194 8.5E-10 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 PANTHER PTHR10799:SF750 74 360 2.4E-29 T 23-04-2016 CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 PANTHER PTHR10799 74 360 2.4E-29 T 23-04-2016 CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 361 1.8E-54 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 SMART SM00267 184 363 4.6E-58 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 Gene3D G3DSA:3.30.70.270 197 361 1.8E-50 T 23-04-2016 CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 358 8.8E-45 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 Pfam PF04340 Protein of unknown function, DUF484 11 181 7.0E-12 T 23-04-2016 IPR007435 Protein of unknown function DUF484 CYCME_RS09300 307fd461685aa6ffb97e6e755c6ca9c7 377 SUPERFAMILY SSF55073 200 361 5.81E-45 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS12505 4ab3179f8a25ffd200842f8fef4202ab 644 PANTHER PTHR33490:SF4 1 610 1.3E-87 T 23-04-2016 CYCME_RS12505 4ab3179f8a25ffd200842f8fef4202ab 644 Pfam PF11992 Domain of unknown function (DUF3488) 11 321 1.0E-95 T 23-04-2016 IPR021878 Protein of unknown function DUF3488 CYCME_RS12505 4ab3179f8a25ffd200842f8fef4202ab 644 SMART SM00460 395 466 7.9E-22 T 23-04-2016 IPR002931 Transglutaminase-like CYCME_RS12505 4ab3179f8a25ffd200842f8fef4202ab 644 Pfam PF01841 Transglutaminase-like superfamily 351 464 1.8E-24 T 23-04-2016 IPR002931 Transglutaminase-like CYCME_RS12505 4ab3179f8a25ffd200842f8fef4202ab 644 Gene3D G3DSA:3.90.260.10 301 586 5.1E-43 T 23-04-2016 IPR002931 Transglutaminase-like CYCME_RS12505 4ab3179f8a25ffd200842f8fef4202ab 644 PANTHER PTHR33490 1 610 1.3E-87 T 23-04-2016 CYCME_RS12505 4ab3179f8a25ffd200842f8fef4202ab 644 SUPERFAMILY SSF54001 271 587 7.15E-56 T 23-04-2016 CYCME_RS00430 0b8990c8837764cafb0b62e528618275 94 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 5 92 25.592 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CYCME_RS00430 0b8990c8837764cafb0b62e528618275 94 Gene3D G3DSA:1.10.3880.10 7 93 3.6E-36 T 23-04-2016 CYCME_RS00430 0b8990c8837764cafb0b62e528618275 94 PANTHER PTHR36965 6 91 2.3E-38 T 23-04-2016 CYCME_RS00430 0b8990c8837764cafb0b62e528618275 94 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 11 79 4.0E-21 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CYCME_RS00430 0b8990c8837764cafb0b62e528618275 94 Pfam PF04362 Bacterial Fe(2+) trafficking 7 91 1.2E-37 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CYCME_RS00430 0b8990c8837764cafb0b62e528618275 94 PANTHER PTHR36965:SF1 6 91 2.3E-38 T 23-04-2016 CYCME_RS00430 0b8990c8837764cafb0b62e528618275 94 PIRSF PIRSF029827 5 94 7.8E-36 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CYCME_RS00430 0b8990c8837764cafb0b62e528618275 94 SUPERFAMILY SSF111148 7 93 3.53E-34 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CYCME_RS01070 3df68d8f9498933fc25e1c0a2250fcf5 108 PANTHER PTHR36116 1 103 1.7E-35 T 23-04-2016 CYCME_RS01070 3df68d8f9498933fc25e1c0a2250fcf5 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 105 20.284 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CYCME_RS01070 3df68d8f9498933fc25e1c0a2250fcf5 108 SUPERFAMILY SSF103481 5 104 1.01E-9 T 23-04-2016 CYCME_RS01070 3df68d8f9498933fc25e1c0a2250fcf5 108 PANTHER PTHR36116:SF1 1 103 1.7E-35 T 23-04-2016 CYCME_RS01070 3df68d8f9498933fc25e1c0a2250fcf5 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 103 2.8E-24 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CYCME_RS12210 3df68d8f9498933fc25e1c0a2250fcf5 108 PANTHER PTHR36116 1 103 1.7E-35 T 23-04-2016 CYCME_RS12210 3df68d8f9498933fc25e1c0a2250fcf5 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 105 20.284 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CYCME_RS12210 3df68d8f9498933fc25e1c0a2250fcf5 108 SUPERFAMILY SSF103481 5 104 1.01E-9 T 23-04-2016 CYCME_RS12210 3df68d8f9498933fc25e1c0a2250fcf5 108 PANTHER PTHR36116:SF1 1 103 1.7E-35 T 23-04-2016 CYCME_RS12210 3df68d8f9498933fc25e1c0a2250fcf5 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 103 2.8E-24 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CYCME_RS03310 2db31eb0eed9d06e1c6520ee1074ddf5 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 2.8E-136 T 23-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 CYCME_RS03310 2db31eb0eed9d06e1c6520ee1074ddf5 306 Pfam PF01063 Amino-transferase class IV 36 267 2.9E-53 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS03310 2db31eb0eed9d06e1c6520ee1074ddf5 306 Gene3D G3DSA:3.20.10.10 134 295 2.9E-60 T 23-04-2016 CYCME_RS03310 2db31eb0eed9d06e1c6520ee1074ddf5 306 Gene3D G3DSA:3.30.470.10 8 130 7.8E-41 T 23-04-2016 CYCME_RS03310 2db31eb0eed9d06e1c6520ee1074ddf5 306 PANTHER PTHR11825 1 305 4.6E-115 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS03310 2db31eb0eed9d06e1c6520ee1074ddf5 306 SUPERFAMILY SSF56752 2 303 6.93E-104 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS03310 2db31eb0eed9d06e1c6520ee1074ddf5 306 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS03310 2db31eb0eed9d06e1c6520ee1074ddf5 306 PANTHER PTHR11825:SF7 1 305 4.6E-115 T 23-04-2016 CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 PANTHER PTHR12905:SF7 29 252 2.0E-53 T 23-04-2016 CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 PANTHER PTHR12905:SF7 1 13 2.0E-53 T 23-04-2016 CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 SUPERFAMILY SSF56300 2 240 4.24E-47 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 Gene3D G3DSA:3.60.21.10 19 229 1.0E-28 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 2 238 31.997 T 23-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 191 238 2.0E-9 T 23-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 PANTHER PTHR12905 29 252 2.0E-53 T 23-04-2016 CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 PANTHER PTHR12905 1 13 2.0E-53 T 23-04-2016 CYCME_RS11635 84d62fa40fa8511d1845f8e974e33aee 252 Pfam PF00149 Calcineurin-like phosphoesterase 32 183 1.1E-14 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PANTHER PTHR30555 1 717 0.0 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PANTHER PTHR30555:SF0 1 717 0.0 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Gene3D G3DSA:1.10.420.10 573 693 9.6E-45 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Pfam PF00141 Peroxidase 74 392 1.9E-48 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Pfam PF00141 Peroxidase 400 692 3.0E-38 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00458 Haem peroxidase superfamily signature 162 174 3.5E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00458 Haem peroxidase superfamily signature 253 268 3.5E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00458 Haem peroxidase superfamily signature 144 161 3.5E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00458 Haem peroxidase superfamily signature 312 327 3.5E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00458 Haem peroxidase superfamily signature 84 98 3.5E-18 T 23-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Gene3D G3DSA:1.10.520.10 233 245 1.2E-73 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Gene3D G3DSA:1.10.520.10 696 718 3.3E-51 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Gene3D G3DSA:1.10.520.10 428 572 3.3E-51 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Gene3D G3DSA:1.10.520.10 41 195 1.2E-73 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 SUPERFAMILY SSF48113 14 425 8.55E-149 T 23-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 SUPERFAMILY SSF48113 426 717 3.83E-109 T 23-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 4 717 0.0 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Gene3D G3DSA:1.10.420.10 246 268 7.5E-46 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Gene3D G3DSA:1.10.420.10 304 403 7.5E-46 T 23-04-2016 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 ProSitePatterns PS00436 Peroxidases active site signature. 84 95 - T 23-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 Hamap MF_01961 Catalase-peroxidase [katG]. 1 718 39.369 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 472 498 3.0E-49 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 261 284 3.0E-49 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 61 86 3.0E-49 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 46 59 3.0E-49 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CYCME_RS00645 d67db049833db21a6c0285540be1e9f0 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 20 42 3.0E-49 T 23-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CYCME_RS00965 1ac93ae0130751b110ff01e96d142748 485 PANTHER PTHR11699:SF155 5 485 2.0E-207 T 23-04-2016 CYCME_RS00965 1ac93ae0130751b110ff01e96d142748 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS00965 1ac93ae0130751b110ff01e96d142748 485 Gene3D G3DSA:3.40.605.10 2 263 4.4E-81 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS00965 1ac93ae0130751b110ff01e96d142748 485 Gene3D G3DSA:3.40.309.10 264 449 1.6E-62 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CYCME_RS00965 1ac93ae0130751b110ff01e96d142748 485 PANTHER PTHR11699 5 485 2.0E-207 T 23-04-2016 CYCME_RS00965 1ac93ae0130751b110ff01e96d142748 485 Pfam PF00171 Aldehyde dehydrogenase family 14 474 6.3E-148 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS00965 1ac93ae0130751b110ff01e96d142748 485 SUPERFAMILY SSF53720 3 478 1.57E-144 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS01285 5fb4a970bd524e073b2c9876d397adb1 304 PANTHER PTHR11935:SF95 9 270 1.6E-19 T 23-04-2016 CYCME_RS01285 5fb4a970bd524e073b2c9876d397adb1 304 SMART SM00849 54 234 1.6E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS01285 5fb4a970bd524e073b2c9876d397adb1 304 PANTHER PTHR11935 9 270 1.6E-19 T 23-04-2016 CYCME_RS01285 5fb4a970bd524e073b2c9876d397adb1 304 Gene3D G3DSA:3.60.15.10 34 258 9.1E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS01285 5fb4a970bd524e073b2c9876d397adb1 304 Pfam PF00753 Metallo-beta-lactamase superfamily 51 234 3.0E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS01285 5fb4a970bd524e073b2c9876d397adb1 304 SUPERFAMILY SSF56281 30 275 1.54E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 Gene3D G3DSA:3.30.460.10 23 167 3.8E-48 T 23-04-2016 CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 196 256 2.1E-20 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 SUPERFAMILY SSF81301 16 166 1.31E-38 T 23-04-2016 CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 SUPERFAMILY SSF81891 167 403 9.55E-46 T 23-04-2016 CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 Gene3D G3DSA:1.10.3090.10 168 402 6.1E-47 T 23-04-2016 CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 4 428 35.564 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 PANTHER PTHR13734:SF47 14 256 1.2E-107 T 23-04-2016 CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 15 426 1.1E-150 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 Pfam PF01743 Poly A polymerase head domain 40 169 3.5E-37 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 Pfam PF12626 Polymerase A arginine-rich C-terminus 316 425 2.4E-38 T 23-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain CYCME_RS10785 1838899f65c3efe8f77615bf8a645d65 434 PANTHER PTHR13734 14 256 1.2E-107 T 23-04-2016 CYCME_RS03255 bad65d7e666db35066fe22a86a10d5bb 267 Gene3D G3DSA:3.90.850.10 4 267 9.2E-79 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS03255 bad65d7e666db35066fe22a86a10d5bb 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 7.8E-126 T 23-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 CYCME_RS03255 bad65d7e666db35066fe22a86a10d5bb 267 SUPERFAMILY SSF56529 2 267 1.24E-70 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS03255 bad65d7e666db35066fe22a86a10d5bb 267 PANTHER PTHR30143 2 267 1.4E-85 T 23-04-2016 CYCME_RS11720 a55547381a3bc1df19989b114f61afab 392 SUPERFAMILY SSF54506 2 181 7.53E-69 T 23-04-2016 CYCME_RS11720 a55547381a3bc1df19989b114f61afab 392 SUPERFAMILY SSF54506 186 391 4.39E-75 T 23-04-2016 CYCME_RS11720 a55547381a3bc1df19989b114f61afab 392 PANTHER PTHR30349:SF21 1 377 6.1E-117 T 23-04-2016 CYCME_RS11720 a55547381a3bc1df19989b114f61afab 392 Gene3D G3DSA:3.10.310.10 194 370 2.5E-77 T 23-04-2016 CYCME_RS11720 a55547381a3bc1df19989b114f61afab 392 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 392 3.4E-217 T 23-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 CYCME_RS11720 a55547381a3bc1df19989b114f61afab 392 Pfam PF04303 PrpF protein 6 388 3.9E-165 T 23-04-2016 IPR007400 PrpF protein CYCME_RS11720 a55547381a3bc1df19989b114f61afab 392 Gene3D G3DSA:3.10.310.10 3 193 4.1E-88 T 23-04-2016 CYCME_RS11720 a55547381a3bc1df19989b114f61afab 392 PANTHER PTHR30349 1 377 6.1E-117 T 23-04-2016 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 PANTHER PTHR11079 9 77 5.6E-114 T 23-04-2016 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 PANTHER PTHR11079 93 312 5.6E-114 T 23-04-2016 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 Pfam PF00849 RNA pseudouridylate synthase 100 248 4.9E-34 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 SUPERFAMILY SSF55120 93 310 1.23E-63 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 SUPERFAMILY SSF55174 20 72 2.55E-7 T 23-04-2016 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 Gene3D G3DSA:3.10.290.10 21 69 2.4E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 SMART SM00363 21 82 9.2E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 312 5.5E-84 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 PANTHER PTHR11079:SF84 9 77 5.6E-114 T 23-04-2016 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 PANTHER PTHR11079:SF84 93 312 5.6E-114 T 23-04-2016 CYCME_RS06110 1830248f485de4249072f63dd7615c8e 312 Pfam PF01479 S4 domain 21 67 4.1E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS02195 4cd4184756efa80dfc87c7136d8c99e8 231 PANTHER PTHR24220 9 231 1.1E-81 T 23-04-2016 CYCME_RS02195 4cd4184756efa80dfc87c7136d8c99e8 231 SUPERFAMILY SSF52540 4 228 1.46E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02195 4cd4184756efa80dfc87c7136d8c99e8 231 Pfam PF00005 ABC transporter 32 163 4.7E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS02195 4cd4184756efa80dfc87c7136d8c99e8 231 SMART SM00382 41 213 3.8E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS02195 4cd4184756efa80dfc87c7136d8c99e8 231 PANTHER PTHR24220:SF117 9 231 1.1E-81 T 23-04-2016 CYCME_RS02195 4cd4184756efa80dfc87c7136d8c99e8 231 Gene3D G3DSA:3.40.50.300 5 224 1.3E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05845 bc154965fa45f634f4f7f767680f59cf 299 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 235 244 - T 23-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 CYCME_RS05845 bc154965fa45f634f4f7f767680f59cf 299 PANTHER PTHR10277 1 295 3.5E-172 T 23-04-2016 CYCME_RS05845 bc154965fa45f634f4f7f767680f59cf 299 Gene3D G3DSA:3.20.20.70 7 290 1.9E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS05845 bc154965fa45f634f4f7f767680f59cf 299 PANTHER PTHR10277:SF40 1 295 3.5E-172 T 23-04-2016 CYCME_RS05845 bc154965fa45f634f4f7f767680f59cf 299 Pfam PF00682 HMGL-like 8 282 2.1E-57 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CYCME_RS05845 bc154965fa45f634f4f7f767680f59cf 299 SUPERFAMILY SSF51569 5 286 1.59E-76 T 23-04-2016 CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 SUPERFAMILY SSF56317 1 239 8.37E-56 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 Gene3D G3DSA:3.60.110.10 1 240 2.3E-57 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 268 513 1.3E-64 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 SUPERFAMILY SSF52402 252 518 3.53E-77 T 23-04-2016 CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 Pfam PF02540 NAD synthase 261 509 9.5E-76 T 23-04-2016 IPR022310 NAD/GMP synthase CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 PANTHER PTHR23090 1 532 1.6E-160 T 23-04-2016 CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 Pfam PF00795 Carbon-nitrogen hydrolase 2 239 6.7E-28 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 PIRSF PIRSF006630 1 536 4.9E-197 T 23-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 CYCME_RS11530 976a79f89ce950dce9edfffb28e4b68f 540 Gene3D G3DSA:3.40.50.620 247 517 5.8E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 Pfam PF11940 Domain of unknown function (DUF3458) 467 834 1.2E-131 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 SUPERFAMILY SSF63737 5 201 1.09E-40 T 23-04-2016 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 321 333 1.2E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 317 1.2E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 184 199 1.2E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 1.2E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 266 276 1.2E-9 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PANTHER PTHR11533:SF152 6 591 0.0 T 23-04-2016 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PANTHER PTHR11533:SF152 616 876 0.0 T 23-04-2016 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PANTHER PTHR11533 6 591 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 PANTHER PTHR11533 616 876 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 Pfam PF01433 Peptidase family M1 24 392 7.3E-66 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 Gene3D G3DSA:1.25.50.10 553 876 3.3E-114 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 876 0.0 T 23-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 Gene3D G3DSA:1.10.390.10 316 459 4.6E-35 T 23-04-2016 CYCME_RS02530 3997abf574ed1e586ff9f81bc66abdee 878 SUPERFAMILY SSF55486 212 458 1.43E-75 T 23-04-2016 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 PANTHER PTHR11986 6 433 5.0E-200 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 16 424 2.4E-179 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 4 428 48.339 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 Gene3D G3DSA:3.40.640.10 65 331 1.4E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 PANTHER PTHR11986:SF8 6 433 5.0E-200 T 23-04-2016 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 SUPERFAMILY SSF53383 7 424 1.03E-122 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 Pfam PF00202 Aminotransferase class-III 29 424 4.6E-126 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 Gene3D G3DSA:3.90.1150.10 6 64 4.9E-57 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS02120 4f2f5c115569cc177f3b110345ad4d1b 440 Gene3D G3DSA:3.90.1150.10 336 424 4.9E-57 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS03715 bfba6a1083e0dda99e6785f3e82c7351 181 PIRSF PIRSF002161 1 181 3.7E-66 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03715 bfba6a1083e0dda99e6785f3e82c7351 181 Pfam PF00281 Ribosomal protein L5 25 80 1.2E-25 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal CYCME_RS03715 bfba6a1083e0dda99e6785f3e82c7351 181 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 42.334 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03715 bfba6a1083e0dda99e6785f3e82c7351 181 Gene3D G3DSA:3.30.1440.10 1 178 4.3E-74 T 23-04-2016 IPR022803 Ribosomal protein L5 domain CYCME_RS03715 bfba6a1083e0dda99e6785f3e82c7351 181 Pfam PF00673 ribosomal L5P family C-terminus 84 176 5.5E-40 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal CYCME_RS03715 bfba6a1083e0dda99e6785f3e82c7351 181 PANTHER PTHR11994 1 179 2.6E-87 T 23-04-2016 CYCME_RS03715 bfba6a1083e0dda99e6785f3e82c7351 181 SUPERFAMILY SSF55282 4 178 5.42E-75 T 23-04-2016 IPR022803 Ribosomal protein L5 domain CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 Pfam PF00107 Zinc-binding dehydrogenase 197 306 2.1E-22 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 PANTHER PTHR11695:SF571 125 365 3.3E-115 T 23-04-2016 CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 PANTHER PTHR11695:SF571 15 104 3.3E-115 T 23-04-2016 CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 SUPERFAMILY SSF50129 1 193 2.13E-55 T 23-04-2016 IPR011032 GroES-like CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 Gene3D G3DSA:3.90.180.10 2 189 4.0E-49 T 23-04-2016 IPR011032 GroES-like CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 PANTHER PTHR11695 125 365 3.3E-115 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 PANTHER PTHR11695 15 104 3.3E-115 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 SUPERFAMILY SSF51735 160 332 1.5E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 Gene3D G3DSA:3.40.50.720 190 308 5.1E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 CYCME_RS02640 40eedbecd2935174720b19af4349fa48 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 120 2.8E-23 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CYCME_RS10910 a7742793b4fd9045154e3be23e2e544d 96 Pfam PF04077 DsrH like protein 9 90 4.2E-20 T 23-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CYCME_RS10910 a7742793b4fd9045154e3be23e2e544d 96 SUPERFAMILY SSF75169 1 92 3.03E-16 T 23-04-2016 IPR027396 DsrEFH-like CYCME_RS10910 a7742793b4fd9045154e3be23e2e544d 96 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 7 92 6.8E-18 T 23-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CYCME_RS10910 a7742793b4fd9045154e3be23e2e544d 96 Gene3D G3DSA:3.40.1260.10 1 91 2.5E-18 T 23-04-2016 IPR027396 DsrEFH-like CYCME_RS08300 01a61ce0e844bc8a6d4465827f925759 314 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 55 271 1.5E-31 T 23-04-2016 IPR008775 Phytanoyl-CoA dioxygenase CYCME_RS08300 01a61ce0e844bc8a6d4465827f925759 314 TIGRFAM TIGR02408 ectoine_ThpD: ectoine hydroxylase 32 307 8.8E-109 T 23-04-2016 IPR012774 Ectoine dioxygenase GO:0016706|GO:0055114 KEGG: 00260+1.14.11.-|KEGG: 00361+1.14.11.-|KEGG: 00904+1.14.11.- CYCME_RS08300 01a61ce0e844bc8a6d4465827f925759 314 SUPERFAMILY SSF51197 46 302 1.1E-59 T 23-04-2016 CYCME_RS08300 01a61ce0e844bc8a6d4465827f925759 314 Gene3D G3DSA:2.60.120.620 41 297 1.3E-56 T 23-04-2016 CYCME_RS08300 01a61ce0e844bc8a6d4465827f925759 314 PANTHER PTHR20883:SF0 29 280 3.0E-55 T 23-04-2016 CYCME_RS08300 01a61ce0e844bc8a6d4465827f925759 314 PANTHER PTHR20883 29 280 3.0E-55 T 23-04-2016 CYCME_RS06115 2de14f7317dbede80079f769644c40b6 214 PANTHER PTHR18901 1 211 2.4E-49 T 23-04-2016 CYCME_RS06115 2de14f7317dbede80079f769644c40b6 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 2.2E-35 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS06115 2de14f7317dbede80079f769644c40b6 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 180 1.3E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS06115 2de14f7317dbede80079f769644c40b6 214 PANTHER PTHR18901:SF40 1 211 2.4E-49 T 23-04-2016 CYCME_RS06115 2de14f7317dbede80079f769644c40b6 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 186 1.1E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS06115 2de14f7317dbede80079f769644c40b6 214 Gene3D G3DSA:1.10.150.240 23 74 3.2E-11 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CYCME_RS06115 2de14f7317dbede80079f769644c40b6 214 Gene3D G3DSA:3.40.50.1000 75 211 7.7E-34 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS06115 2de14f7317dbede80079f769644c40b6 214 SUPERFAMILY SSF56784 3 212 6.0E-53 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS10110 d4a631c716c32eea9024845d741d5be9 220 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 193 7.1E-62 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CYCME_RS10110 d4a631c716c32eea9024845d741d5be9 220 PANTHER PTHR30586:SF1 1 213 2.3E-137 T 23-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CYCME_RS10110 d4a631c716c32eea9024845d741d5be9 220 PIRSF PIRSF006102 1 212 1.9E-69 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CYCME_RS10110 d4a631c716c32eea9024845d741d5be9 220 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 205 35.234 T 23-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CYCME_RS10110 d4a631c716c32eea9024845d741d5be9 220 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 2 204 5.4E-100 T 23-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CYCME_RS10110 d4a631c716c32eea9024845d741d5be9 220 PANTHER PTHR30586 1 213 2.3E-137 T 23-04-2016 CYCME_RS00370 2063cdbff4fd0be0e95fabbeb144e4e5 370 Pfam PF00437 Type II/IV secretion system protein 14 268 4.2E-36 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CYCME_RS00370 2063cdbff4fd0be0e95fabbeb144e4e5 370 SUPERFAMILY SSF52540 4 336 2.89E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00370 2063cdbff4fd0be0e95fabbeb144e4e5 370 PANTHER PTHR30486 1 370 6.9E-163 T 23-04-2016 CYCME_RS00370 2063cdbff4fd0be0e95fabbeb144e4e5 370 Gene3D G3DSA:3.40.50.300 101 344 3.8E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00370 2063cdbff4fd0be0e95fabbeb144e4e5 370 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 344 9.2E-134 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CYCME_RS00370 2063cdbff4fd0be0e95fabbeb144e4e5 370 PANTHER PTHR30486:SF3 1 370 6.9E-163 T 23-04-2016 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 SUPERFAMILY SSF47384 489 565 1.51E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 SUPERFAMILY SSF55874 565 713 1.28E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 SUPERFAMILY SSF158472 306 353 2.09E-9 T 23-04-2016 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PIRSF PIRSF037532 2 715 8.8E-209 T 23-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 Gene3D G3DSA:1.10.287.130 490 562 8.7E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PANTHER PTHR24423:SF471 123 142 1.1E-68 T 23-04-2016 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PANTHER PTHR24423:SF471 369 712 1.1E-68 T 23-04-2016 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 SMART SM00387 604 714 7.3E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 659 3.2E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 673 3.2E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 692 3.2E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 711 3.2E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 Pfam PF00512 His Kinase A (phospho-acceptor) domain 496 562 7.5E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 Gene3D G3DSA:3.30.450.20 367 484 2.3E-10 T 23-04-2016 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PANTHER PTHR24423 123 142 1.1E-68 T 23-04-2016 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 PANTHER PTHR24423 369 712 1.1E-68 T 23-04-2016 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 Gene3D G3DSA:3.30.565.10 568 712 1.7E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 605 713 3.3E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 SMART SM00304 305 357 4.5E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 SMART SM00388 494 566 1.1E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 Pfam PF00672 HAMP domain 286 352 1.6E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS01570 5ad54019b38e6a827132ac07fbfc5c6e 715 SUPERFAMILY SSF55785 361 484 9.3E-7 T 23-04-2016 IPR000014 PAS domain CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 428 2.4E-163 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 1.7E-87 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 1.7E-87 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 1.7E-87 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 1.7E-87 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PRINTS PR00083 Histidinol dehydrogenase signature 172 198 1.7E-87 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 1.7E-87 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PRINTS PR00083 Histidinol dehydrogenase signature 202 227 1.7E-87 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PRINTS PR00083 Histidinol dehydrogenase signature 138 164 1.7E-87 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 SUPERFAMILY SSF53720 29 428 6.47E-85 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PIRSF PIRSF000099 1 431 1.3E-160 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 Gene3D G3DSA:3.40.50.1980 29 241 1.1E-82 T 23-04-2016 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 PANTHER PTHR21256 1 431 7.1E-197 T 23-04-2016 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 Pfam PF00815 Histidinol dehydrogenase 27 428 1.4E-170 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04060 7d91c674e01bd160cd9bdc90b020d538 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 429 40.264 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 340 352 5.0E-19 T 23-04-2016 CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 235 251 5.0E-19 T 23-04-2016 CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 374 398 5.0E-19 T 23-04-2016 CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 258 272 5.0E-19 T 23-04-2016 CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 Pfam PF02384 N-6 DNA Methylase 211 543 7.1E-116 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 PANTHER PTHR30408:SF8 1 562 2.6E-167 T 23-04-2016 CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 PANTHER PTHR30408 1 562 2.6E-167 T 23-04-2016 CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 Pfam PF12161 HsdM N-terminal domain 15 192 1.4E-17 T 23-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 Gene3D G3DSA:3.40.50.150 237 488 6.8E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 SUPERFAMILY SSF53335 104 582 2.71E-132 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04850 10d1b1af791abb916d0573d8c6a20d05 583 SUPERFAMILY SSF53335 14 49 2.71E-132 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 SUPERFAMILY SSF54534 149 252 2.42E-26 T 23-04-2016 CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 PANTHER PTHR10657:SF16 1 401 5.4E-103 T 23-04-2016 CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 Gene3D G3DSA:3.10.50.40 144 254 1.2E-29 T 23-04-2016 CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 Gene3D G3DSA:3.10.50.40 255 380 1.9E-36 T 23-04-2016 CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 Pfam PF00639 PPIC-type PPIASE domain 155 247 3.1E-19 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 Pfam PF13616 PPIC-type PPIASE domain 254 357 4.6E-27 T 23-04-2016 CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 PANTHER PTHR10657 1 401 5.4E-103 T 23-04-2016 CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 SUPERFAMILY SSF109998 2 178 6.67E-38 T 23-04-2016 IPR027304 Trigger factor/SurA domain CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 SUPERFAMILY SSF54534 254 356 7.2E-30 T 23-04-2016 CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 Pfam PF09312 SurA N-terminal domain 1 118 2.3E-27 T 23-04-2016 IPR015391 SurA N-terminal CYCME_RS03410 674c2866470f906ee4caafcc673e1956 404 Hamap MF_01183 Chaperone SurA [surA]. 1 403 29.929 T 23-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 Gene3D G3DSA:3.40.50.720 141 264 2.5E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 Gene3D G3DSA:3.40.192.10 7 140 3.0E-48 T 23-04-2016 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 PANTHER PTHR10025 1 280 4.0E-166 T 23-04-2016 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 5.1E-86 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.1E-86 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.1E-86 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 5.1E-86 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.1E-86 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.1E-86 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.1E-86 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.149 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 SUPERFAMILY SSF51735 123 282 6.0E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 282 4.8E-71 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 SUPERFAMILY SSF53223 1 122 3.17E-38 T 23-04-2016 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 1.0E-37 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS07230 50fedd6d7623de841b1add88149ab104 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 SUPERFAMILY SSF56014 120 272 1.44E-52 T 23-04-2016 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 Gene3D G3DSA:3.30.413.10 406 545 5.1E-32 T 23-04-2016 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 Gene3D G3DSA:3.30.413.10 120 272 1.8E-47 T 23-04-2016 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 SUPERFAMILY SSF56014 405 545 8.51E-36 T 23-04-2016 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 332 397 1.4E-13 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 110 9.9E-14 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 Gene3D G3DSA:3.90.480.10 319 401 3.3E-35 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 Gene3D G3DSA:3.90.480.10 49 117 3.3E-35 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 SUPERFAMILY SSF55124 1 125 1.52E-28 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 3.8E-47 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 448 543 5.2E-10 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 452 468 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 SUPERFAMILY SSF55124 313 419 3.43E-23 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 SUPERFAMILY SSF55124 252 276 3.43E-23 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 PRINTS PR00397 Sirohaem Fe-binding site signature 452 470 6.0E-5 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 PRINTS PR00397 Sirohaem Fe-binding site signature 408 426 6.0E-5 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 PANTHER PTHR11493:SF47 1 294 9.1E-151 T 23-04-2016 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 PANTHER PTHR11493:SF47 325 546 9.1E-151 T 23-04-2016 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 PANTHER PTHR11493 1 294 9.1E-151 T 23-04-2016 CYCME_RS00210 3f21204e1e10de10c67d62eb7202863d 547 PANTHER PTHR11493 325 546 9.1E-151 T 23-04-2016 CYCME_RS06940 17f7894ef9f46e91e0239415fe5d1720 653 PANTHER PTHR23028 5 451 1.3E-86 T 23-04-2016 CYCME_RS06940 17f7894ef9f46e91e0239415fe5d1720 653 Pfam PF01757 Acyltransferase family 8 329 7.8E-30 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 CYCME_RS06940 17f7894ef9f46e91e0239415fe5d1720 653 PANTHER PTHR23028:SF53 5 451 1.3E-86 T 23-04-2016 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.3E-10 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Gene3D G3DSA:3.40.50.300 168 349 6.3E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Gene3D G3DSA:1.10.8.60 664 748 2.2E-31 T 23-04-2016 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Gene3D G3DSA:1.10.8.60 350 432 1.4E-28 T 23-04-2016 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 SMART SM00382 486 653 2.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 SMART SM00382 205 350 7.7E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 3.5E-37 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 3.5E-37 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 3.5E-37 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 3.5E-37 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 312 7.5E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Gene3D G3DSA:3.40.50.300 440 663 8.4E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 SUPERFAMILY SSF52540 165 411 2.1E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Gene3D G3DSA:1.10.1780.10 1 141 6.0E-40 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 SMART SM01086 652 741 2.9E-37 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 23-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 SUPERFAMILY SSF52540 436 739 4.06E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 5.4E-25 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 645 2.6E-49 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 SUPERFAMILY SSF81923 1 141 2.62E-56 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 PANTHER PTHR11638 1 754 0.0 T 23-04-2016 CYCME_RS06190 58b6ba41495bcb8304257f6c9ef1793e 754 PANTHER PTHR11638:SF111 1 754 0.0 T 23-04-2016 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 Pfam PF02803 Thiolase, C-terminal domain 244 346 8.8E-8 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 PIRSF PIRSF000429 9 377 8.1E-30 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 SUPERFAMILY SSF53901 229 369 1.19E-27 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 PANTHER PTHR18919 4 381 1.5E-146 T 23-04-2016 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 PANTHER PTHR18919:SF108 4 381 1.5E-146 T 23-04-2016 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 Gene3D G3DSA:3.40.47.10 239 367 5.6E-19 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 Gene3D G3DSA:3.40.47.10 142 179 5.6E-19 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 Gene3D G3DSA:3.40.47.10 194 221 1.6E-18 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 Gene3D G3DSA:3.40.47.10 28 115 1.6E-18 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS06090 ce9f828791e79391ffca7c53655ae269 383 SUPERFAMILY SSF53901 19 224 2.26E-26 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS11320 9948a81c8cbbe1f986052ab4680f7fd7 282 Pfam PF00561 alpha/beta hydrolase fold 34 268 1.6E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11320 9948a81c8cbbe1f986052ab4680f7fd7 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 3.0E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11320 9948a81c8cbbe1f986052ab4680f7fd7 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 3.0E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11320 9948a81c8cbbe1f986052ab4680f7fd7 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 226 240 3.0E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11320 9948a81c8cbbe1f986052ab4680f7fd7 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 3.0E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11320 9948a81c8cbbe1f986052ab4680f7fd7 282 PANTHER PTHR10992 19 282 7.3E-48 T 23-04-2016 CYCME_RS11320 9948a81c8cbbe1f986052ab4680f7fd7 282 SUPERFAMILY SSF53474 19 281 7.28E-61 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS11320 9948a81c8cbbe1f986052ab4680f7fd7 282 Gene3D G3DSA:3.40.50.1820 18 281 8.3E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 PANTHER PTHR11638:SF18 1 859 0.0 T 23-04-2016 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 1.3E-11 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 65 4.6E-11 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 SUPERFAMILY SSF52540 159 546 3.69E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 846 2.5E-24 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Gene3D G3DSA:3.40.50.300 160 342 2.1E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 320 8.8E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 SMART SM00382 198 343 1.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 SMART SM00382 598 769 1.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 632 650 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Gene3D G3DSA:1.10.8.60 777 857 7.0E-29 T 23-04-2016 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 1.6E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 1.6E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 1.6E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 1.6E-41 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 PANTHER PTHR11638 1 859 0.0 T 23-04-2016 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 760 2.2E-55 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Gene3D G3DSA:3.40.50.300 551 776 1.7E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 SUPERFAMILY SSF52540 547 856 4.71E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 SUPERFAMILY SSF81923 4 156 7.75E-37 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Gene3D G3DSA:1.10.1780.10 1 147 5.5E-40 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 Gene3D G3DSA:1.10.8.60 343 428 8.0E-36 T 23-04-2016 CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 SMART SM01086 767 856 2.6E-34 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CYCME_RS11505 0230a7e8088d711332c4a594ec227b50 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 CYCME_RS09135 910829e0d523da1510472e3fef1c334c 200 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 15 91 1.4E-9 T 23-04-2016 IPR032030 YscD, cytoplasmic domain CYCME_RS09135 910829e0d523da1510472e3fef1c334c 200 Gene3D G3DSA:2.60.200.20 3 92 2.3E-16 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CYCME_RS09135 910829e0d523da1510472e3fef1c334c 200 SUPERFAMILY SSF49879 2 92 1.57E-16 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 CYCME_RS09135 910829e0d523da1510472e3fef1c334c 200 SMART SM00240 22 72 0.0017 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CYCME_RS12495 361ed491d2f14dfbe5087977ab6e6abe 202 SUPERFAMILY SSF52833 3 101 5.4E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS12495 361ed491d2f14dfbe5087977ab6e6abe 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 191 2.6E-13 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CYCME_RS12495 361ed491d2f14dfbe5087977ab6e6abe 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 77 1.7E-18 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CYCME_RS12495 361ed491d2f14dfbe5087977ab6e6abe 202 SUPERFAMILY SSF47616 69 200 1.3E-24 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS12495 361ed491d2f14dfbe5087977ab6e6abe 202 PANTHER PTHR11260 1 200 6.5E-45 T 23-04-2016 CYCME_RS12495 361ed491d2f14dfbe5087977ab6e6abe 202 Gene3D G3DSA:1.20.1050.10 90 198 1.2E-22 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS12495 361ed491d2f14dfbe5087977ab6e6abe 202 Gene3D G3DSA:3.40.30.10 2 89 6.8E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS06720 007e180b620dbb695b85dd9e0ef7240b 198 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 1.5E-7 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CYCME_RS06720 007e180b620dbb695b85dd9e0ef7240b 198 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 1.5E-7 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CYCME_RS06720 007e180b620dbb695b85dd9e0ef7240b 198 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 1.5E-7 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CYCME_RS06720 007e180b620dbb695b85dd9e0ef7240b 198 PANTHER PTHR33516:SF1 61 198 2.4E-43 T 23-04-2016 CYCME_RS06720 007e180b620dbb695b85dd9e0ef7240b 198 Gene3D G3DSA:2.10.109.10 84 197 1.2E-44 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CYCME_RS06720 007e180b620dbb695b85dd9e0ef7240b 198 Pfam PF00717 Peptidase S24-like 115 181 4.8E-13 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CYCME_RS06720 007e180b620dbb695b85dd9e0ef7240b 198 SUPERFAMILY SSF51306 73 196 1.55E-36 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CYCME_RS06720 007e180b620dbb695b85dd9e0ef7240b 198 PANTHER PTHR33516 61 198 2.4E-43 T 23-04-2016 CYCME_RS07445 5e722cc6ca69b588534024d88f0b3bc5 126 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 119 1.4E-25 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 CYCME_RS07445 5e722cc6ca69b588534024d88f0b3bc5 126 Gene3D G3DSA:1.20.1300.10 10 121 1.9E-26 T 23-04-2016 CYCME_RS07445 5e722cc6ca69b588534024d88f0b3bc5 126 SUPERFAMILY SSF81343 11 122 8.72E-26 T 23-04-2016 CYCME_RS07445 5e722cc6ca69b588534024d88f0b3bc5 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 117 2.7E-17 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 CYCME_RS05720 2ffe215be8583e492545c949b5723a1c 372 PIRSF PIRSF005572 1 372 9.8E-131 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CYCME_RS05720 2ffe215be8583e492545c949b5723a1c 372 Gene3D G3DSA:3.90.1150.10 245 358 1.4E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS05720 2ffe215be8583e492545c949b5723a1c 372 PANTHER PTHR11601:SF20 1 370 9.4E-143 T 23-04-2016 CYCME_RS05720 2ffe215be8583e492545c949b5723a1c 372 Pfam PF00266 Aminotransferase class-V 2 359 7.8E-81 T 23-04-2016 IPR000192 Aminotransferase class V domain CYCME_RS05720 2ffe215be8583e492545c949b5723a1c 372 Gene3D G3DSA:3.40.640.10 14 244 2.3E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS05720 2ffe215be8583e492545c949b5723a1c 372 PANTHER PTHR11601 1 370 9.4E-143 T 23-04-2016 CYCME_RS05720 2ffe215be8583e492545c949b5723a1c 372 SUPERFAMILY SSF53383 1 368 8.55E-100 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 SUPERFAMILY SSF51735 103 266 9.24E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 Gene3D G3DSA:3.40.50.720 108 247 1.5E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 PANTHER PTHR21089 1 270 1.3E-120 T 23-04-2016 CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 Gene3D G3DSA:3.40.192.10 2 107 8.7E-36 T 23-04-2016 CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 267 30.832 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 194 1.3E-7 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 267 1.8E-83 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 PANTHER PTHR21089:SF2 1 270 1.3E-120 T 23-04-2016 CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 6.6E-24 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS01640 2f027212330a1d01f5b575f8f7ecaac0 270 SUPERFAMILY SSF53223 2 102 2.71E-29 T 23-04-2016 CYCME_RS10875 ee5b1bcfe140f39d0fe8a6b852ef6bb4 574 SUPERFAMILY SSF53474 199 498 9.66E-36 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10875 ee5b1bcfe140f39d0fe8a6b852ef6bb4 574 Gene3D G3DSA:3.40.50.1820 202 541 1.4E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10875 ee5b1bcfe140f39d0fe8a6b852ef6bb4 574 PANTHER PTHR36837 1 572 6.6E-211 T 23-04-2016 CYCME_RS10875 ee5b1bcfe140f39d0fe8a6b852ef6bb4 574 PANTHER PTHR36837:SF2 1 572 6.6E-211 T 23-04-2016 CYCME_RS10875 ee5b1bcfe140f39d0fe8a6b852ef6bb4 574 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 49 570 8.8E-215 T 23-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 CYCME_RS10875 ee5b1bcfe140f39d0fe8a6b852ef6bb4 574 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 87 253 7.9E-72 T 23-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- CYCME_RS05870 cc1516bcc7777f7c019e5a9f9c724575 205 Gene3D G3DSA:1.10.357.10 58 196 2.3E-27 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CYCME_RS05870 cc1516bcc7777f7c019e5a9f9c724575 205 SUPERFAMILY SSF46689 6 79 5.99E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS05870 cc1516bcc7777f7c019e5a9f9c724575 205 SUPERFAMILY SSF48498 87 196 1.52E-16 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CYCME_RS05870 cc1516bcc7777f7c019e5a9f9c724575 205 Gene3D G3DSA:1.10.10.60 7 57 6.3E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS05870 cc1516bcc7777f7c019e5a9f9c724575 205 PANTHER PTHR30055 11 205 1.1E-21 T 23-04-2016 CYCME_RS05870 cc1516bcc7777f7c019e5a9f9c724575 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.9E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS05870 cc1516bcc7777f7c019e5a9f9c724575 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.9E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS05870 cc1516bcc7777f7c019e5a9f9c724575 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 3.3E-16 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 32 312 7.9E-150 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 Gene3D G3DSA:3.30.930.10 23 237 1.1E-105 T 23-04-2016 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 30 321 1.4E-161 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 Gene3D G3DSA:1.20.58.180 238 319 1.4E-36 T 23-04-2016 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 SUPERFAMILY SSF55681 30 313 1.39E-134 T 23-04-2016 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 30 314 60.656 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 105 125 2.4E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 182 2.4E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 274 290 2.4E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 136 160 2.4E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 185 200 2.4E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 99 2.4E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00110 519b3151b220aee30757b9f6ebb28edf 326 PANTHER PTHR30075 12 326 5.3E-254 T 23-04-2016 CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 Pfam PF12161 HsdM N-terminal domain 9 149 4.9E-19 T 23-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 309 315 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 PANTHER PTHR30195:SF10 10 803 3.5E-301 T 23-04-2016 CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 PANTHER PTHR30195 10 803 3.5E-301 T 23-04-2016 CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 227 241 5.7E-13 T 23-04-2016 CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 306 318 5.7E-13 T 23-04-2016 CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 197 213 5.7E-13 T 23-04-2016 CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 SUPERFAMILY SSF53335 7 47 2.52E-111 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 SUPERFAMILY SSF53335 80 585 2.52E-111 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 Pfam PF02384 N-6 DNA Methylase 177 488 1.0E-57 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CYCME_RS12005 6360e0925a72e58f823b926f78963fd6 807 Gene3D G3DSA:3.40.50.150 199 469 5.4E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 PANTHER PTHR11609:SF6 11 296 8.0E-141 T 23-04-2016 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 SUPERFAMILY SSF56104 8 295 1.21E-101 T 23-04-2016 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 ProSitePatterns PS01057 SAICAR synthetase signature 1. 109 123 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 Pfam PF01259 SAICAR synthetase 17 270 2.0E-99 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 Gene3D G3DSA:3.30.200.20 8 120 2.3E-43 T 23-04-2016 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 18 294 3.1E-82 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 ProSitePatterns PS01058 SAICAR synthetase signature 2. 208 216 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 15 296 26.572 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 Gene3D G3DSA:3.30.470.20 121 251 1.4E-55 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS02025 e1fe3a8dab967426a6f1580dd27de336 296 PANTHER PTHR11609 11 296 8.0E-141 T 23-04-2016 CYCME_RS00900 4669dcdce87e07f6ceb644c8a875e13b 115 SUPERFAMILY SSF52833 2 115 9.89E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS00900 4669dcdce87e07f6ceb644c8a875e13b 115 PANTHER PTHR30041 2 115 1.0E-48 T 23-04-2016 CYCME_RS00900 4669dcdce87e07f6ceb644c8a875e13b 115 Pfam PF03960 ArsC family 6 114 9.1E-18 T 23-04-2016 IPR006660 Arsenate reductase-like CYCME_RS00900 4669dcdce87e07f6ceb644c8a875e13b 115 PANTHER PTHR30041:SF4 2 115 1.0E-48 T 23-04-2016 CYCME_RS00900 4669dcdce87e07f6ceb644c8a875e13b 115 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 5.4E-45 T 23-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CYCME_RS00900 4669dcdce87e07f6ceb644c8a875e13b 115 Gene3D G3DSA:3.40.30.10 2 115 2.3E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 SUPERFAMILY SSF54862 1 136 2.51E-38 T 23-04-2016 CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 Gene3D G3DSA:3.30.70.20 2 56 1.0E-14 T 23-04-2016 CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 Gene3D G3DSA:3.30.70.20 124 137 1.0E-14 T 23-04-2016 CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 PANTHER PTHR11938 1 137 4.9E-27 T 23-04-2016 CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 Pfam PF00037 4Fe-4S binding domain 6 22 7.8E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 Gene3D G3DSA:3.30.70.20 57 92 8.3E-12 T 23-04-2016 CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 Gene3D G3DSA:3.30.70.20 93 123 1.3E-12 T 23-04-2016 CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 Pfam PF13247 4Fe-4S dicluster domain 47 135 8.0E-14 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS02995 0522012ae6affb16e350d252598d9580 155 PANTHER PTHR11938:SF82 1 137 4.9E-27 T 23-04-2016 CYCME_RS12370 daaee8f12216f61c6e1e034a104efd4b 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 7 225 1.3E-79 T 23-04-2016 IPR012808 Conserved hypothetical protein CHP02453 CYCME_RS12370 daaee8f12216f61c6e1e034a104efd4b 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 9 219 2.4E-66 T 23-04-2016 IPR012808 Conserved hypothetical protein CHP02453 CYCME_RS12370 daaee8f12216f61c6e1e034a104efd4b 228 PANTHER PTHR36452:SF1 1 228 4.2E-39 T 23-04-2016 CYCME_RS12370 daaee8f12216f61c6e1e034a104efd4b 228 PANTHER PTHR36452 1 228 4.2E-39 T 23-04-2016 CYCME_RS12370 daaee8f12216f61c6e1e034a104efd4b 228 PIRSF PIRSF028451 2 228 8.2E-86 T 23-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 Gene3D G3DSA:1.20.140.10 221 384 4.3E-62 T 23-04-2016 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 PANTHER PTHR10909 7 386 3.0E-239 T 23-04-2016 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 126 138 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 Gene3D G3DSA:2.40.110.10 123 220 1.1E-38 T 23-04-2016 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 Gene3D G3DSA:1.10.540.10 3 121 1.7E-42 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 1.0E-37 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 PANTHER PTHR10909:SF332 7 386 3.0E-239 T 23-04-2016 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 221 8.8E-26 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 SUPERFAMILY SSF47203 232 383 1.37E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 120 1.3E-36 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CYCME_RS05865 39a5411aac19b28f2f63386ba15e0792 386 SUPERFAMILY SSF56645 3 245 3.8E-84 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.0E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PIRSF PIRSF000724 1 391 2.1E-136 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 PANTHER PTHR11406 1 391 6.6E-194 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 Gene3D G3DSA:3.40.50.1260 5 174 1.7E-62 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 Gene3D G3DSA:3.40.50.1270 175 376 2.5E-84 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 SUPERFAMILY SSF53748 3 388 4.83E-145 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 39.259 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01845 906d80176455833bb6d3cca2a1e7e34b 391 Pfam PF00162 Phosphoglycerate kinase 6 378 2.6E-141 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 PANTHER PTHR30115:SF12 1 112 1.0E-71 T 23-04-2016 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 Gene3D G3DSA:3.30.70.120 1 112 2.6E-50 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 SUPERFAMILY SSF54913 1 112 5.08E-45 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 PRINTS PR00340 P-II protein signature 23 41 3.0E-41 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 PRINTS PR00340 P-II protein signature 2 17 3.0E-41 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 PRINTS PR00340 P-II protein signature 83 103 3.0E-41 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 PRINTS PR00340 P-II protein signature 52 75 3.0E-41 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 SMART SM00938 4 105 1.4E-67 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 PANTHER PTHR30115 1 112 1.0E-71 T 23-04-2016 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.1E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS01885 4bdf0a1799222fcadbc63c6a6e3565be 112 PIRSF PIRSF039144 1 112 4.5E-53 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 Pfam PF02954 Bacterial regulatory protein, Fis family 412 452 1.4E-16 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 PANTHER PTHR32071:SF28 1 456 1.3E-228 T 23-04-2016 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 SUPERFAMILY SSF52172 6 179 7.97E-39 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 Pfam PF00072 Response regulator receiver domain 7 114 2.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 Gene3D G3DSA:1.10.8.60 309 382 1.0E-22 T 23-04-2016 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 SUPERFAMILY SSF52540 137 376 3.85E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 Pfam PF00158 Sigma-54 interaction domain 137 302 1.3E-66 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 Gene3D G3DSA:3.40.50.2300 7 126 1.3E-31 T 23-04-2016 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 SMART SM00448 4 115 8.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 PANTHER PTHR32071 1 456 1.3E-228 T 23-04-2016 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 SUPERFAMILY SSF46689 349 455 8.96E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 455 6.2E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 435 6.2E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 Gene3D G3DSA:3.40.50.300 133 308 8.3E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 Gene3D G3DSA:1.10.10.60 395 455 6.0E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS11550 3f1c7427104b0763d482482068fe22b2 456 SMART SM00382 156 299 9.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS05270 0c2c3a0637ac86ba6fde69e853194e8e 267 SUPERFAMILY SSF54534 126 220 4.51E-28 T 23-04-2016 CYCME_RS05270 0c2c3a0637ac86ba6fde69e853194e8e 267 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 160 180 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CYCME_RS05270 0c2c3a0637ac86ba6fde69e853194e8e 267 Pfam PF13616 PPIC-type PPIASE domain 132 219 4.1E-22 T 23-04-2016 CYCME_RS05270 0c2c3a0637ac86ba6fde69e853194e8e 267 PANTHER PTHR10657 5 264 1.3E-35 T 23-04-2016 CYCME_RS05270 0c2c3a0637ac86ba6fde69e853194e8e 267 SUPERFAMILY SSF109998 25 161 1.65E-9 T 23-04-2016 IPR027304 Trigger factor/SurA domain CYCME_RS05270 0c2c3a0637ac86ba6fde69e853194e8e 267 Gene3D G3DSA:3.10.50.40 132 245 5.1E-39 T 23-04-2016 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 PANTHER PTHR19370:SF68 28 279 3.0E-34 T 23-04-2016 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 SUPERFAMILY SSF63380 13 105 1.79E-18 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 249 289 5.2E-17 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 PANTHER PTHR19370 28 279 3.0E-34 T 23-04-2016 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 SUPERFAMILY SSF52343 100 289 7.73E-26 T 23-04-2016 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 PIRSF PIRSF006816 10 291 5.6E-56 T 23-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 Gene3D G3DSA:3.40.50.80 109 247 6.0E-17 T 23-04-2016 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 Gene3D G3DSA:2.40.30.10 11 103 4.5E-25 T 23-04-2016 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 Gene3D G3DSA:2.10.240.10 249 290 2.4E-14 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 CYCME_RS01370 e601119d8e364255752f52734881cdd3 291 Pfam PF00970 Oxidoreductase FAD-binding domain 26 103 5.5E-5 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CYCME_RS11830 a97b8ca65511ccae72da374ff4a39749 162 SMART SM00271 107 161 5.0E-7 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS11830 a97b8ca65511ccae72da374ff4a39749 162 PANTHER PTHR12763 104 157 2.2E-13 T 23-04-2016 CYCME_RS11830 a97b8ca65511ccae72da374ff4a39749 162 SUPERFAMILY SSF46565 102 159 2.09E-14 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS11830 a97b8ca65511ccae72da374ff4a39749 162 Gene3D G3DSA:1.10.287.110 103 159 1.3E-15 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS11830 a97b8ca65511ccae72da374ff4a39749 162 PANTHER PTHR12763:SF17 104 157 2.2E-13 T 23-04-2016 CYCME_RS09790 de1996f79b6bf51cf5c12f80fd6c5192 127 Pfam PF04134 Protein of unknown function, DUF393 14 125 9.9E-14 T 23-04-2016 IPR007263 Protein of unknown function DUF393 CYCME_RS09790 de1996f79b6bf51cf5c12f80fd6c5192 127 SUPERFAMILY SSF52833 6 55 4.81E-5 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS10050 7da86a11cbcdfad8fd95cd7a2ff5cd36 264 PANTHER PTHR13696:SF54 6 148 1.8E-28 T 23-04-2016 CYCME_RS10050 7da86a11cbcdfad8fd95cd7a2ff5cd36 264 SUPERFAMILY SSF52540 6 258 3.45E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10050 7da86a11cbcdfad8fd95cd7a2ff5cd36 264 PANTHER PTHR13696 6 148 1.8E-28 T 23-04-2016 CYCME_RS10050 7da86a11cbcdfad8fd95cd7a2ff5cd36 264 Gene3D G3DSA:3.40.50.300 3 260 3.0E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10050 7da86a11cbcdfad8fd95cd7a2ff5cd36 264 Pfam PF09140 ATPase MipZ 7 262 2.1E-104 T 23-04-2016 IPR015223 ATPase MipZ CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 28 39 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 13 338 2.7E-115 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 Gene3D G3DSA:3.20.20.70 12 300 8.8E-75 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 SUPERFAMILY SSF102114 13 285 1.83E-75 T 23-04-2016 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 Pfam PF13353 4Fe-4S single cluster domain 29 131 3.5E-9 T 23-04-2016 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 PANTHER PTHR22960 13 290 1.9E-118 T 23-04-2016 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 Pfam PF04055 Radical SAM superfamily 26 186 5.8E-30 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 13 338 39.891 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 SMART SM00729 22 226 2.1E-12 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS02990 68cbdccb3a5f1e12c4b13cfa842de5a1 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 193 320 9.6E-37 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 SMART SM01383 42 118 6.9E-46 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 PANTHER PTHR13691 1 274 2.2E-139 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.9E-129 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 SUPERFAMILY SSF50249 2 124 2.26E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 Gene3D G3DSA:2.30.30.30 121 195 5.6E-32 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 Gene3D G3DSA:4.10.950.10 196 273 7.8E-36 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 Gene3D G3DSA:2.40.50.140 1 114 2.8E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 3.2E-34 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 7.5E-56 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 SMART SM01382 124 252 1.8E-90 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 SUPERFAMILY SSF50104 126 272 3.07E-61 T 23-04-2016 IPR008991 Translation protein SH3-like domain CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.852 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CYCME_RS03670 e863e6408c7b2c5711a32a87dcb364f1 275 PIRSF PIRSF002158 13 275 8.7E-99 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS06015 23415fb636f388a291d9509d952dd390 221 Gene3D G3DSA:3.40.109.10 122 219 1.2E-49 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CYCME_RS06015 23415fb636f388a291d9509d952dd390 221 Gene3D G3DSA:3.40.109.10 1 90 1.2E-49 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CYCME_RS06015 23415fb636f388a291d9509d952dd390 221 PANTHER PTHR23026:SF90 1 221 3.4E-49 T 23-04-2016 CYCME_RS06015 23415fb636f388a291d9509d952dd390 221 Pfam PF00881 Nitroreductase family 7 196 1.6E-34 T 23-04-2016 IPR029479 Nitroreductase CYCME_RS06015 23415fb636f388a291d9509d952dd390 221 PANTHER PTHR23026 1 221 3.4E-49 T 23-04-2016 CYCME_RS06015 23415fb636f388a291d9509d952dd390 221 SUPERFAMILY SSF55469 1 219 1.96E-51 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CYCME_RS11645 a8bbba3542f97d57809f8d3bf498653b 217 PANTHER PTHR10000 1 217 1.1E-61 T 23-04-2016 CYCME_RS11645 a8bbba3542f97d57809f8d3bf498653b 217 SUPERFAMILY SSF56784 2 206 3.58E-36 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS11645 a8bbba3542f97d57809f8d3bf498653b 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 1.8E-26 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CYCME_RS11645 a8bbba3542f97d57809f8d3bf498653b 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 9.4E-40 T 23-04-2016 CYCME_RS11645 a8bbba3542f97d57809f8d3bf498653b 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 7.3E-45 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CYCME_RS11645 a8bbba3542f97d57809f8d3bf498653b 217 Gene3D G3DSA:3.40.50.1000 81 216 4.0E-49 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS11645 a8bbba3542f97d57809f8d3bf498653b 217 PANTHER PTHR10000:SF10 1 217 1.1E-61 T 23-04-2016 CYCME_RS11645 a8bbba3542f97d57809f8d3bf498653b 217 Gene3D G3DSA:1.20.1440.100 16 80 2.3E-29 T 23-04-2016 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 SUPERFAMILY SSF53041 4 148 7.98E-39 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 23-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 Gene3D G3DSA:3.40.50.1390 4 131 4.8E-32 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 Pfam PF00239 Resolvase, N terminal domain 5 148 1.2E-41 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 PANTHER PTHR30461 4 198 2.2E-41 T 23-04-2016 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 SUPERFAMILY SSF46689 156 199 7.77E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 Pfam PF13384 Homeodomain-like domain 166 199 7.5E-6 T 23-04-2016 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 Gene3D G3DSA:1.10.10.60 157 195 1.7E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS06545 5c026855e5d365bb50d5c72276c41c5a 201 SMART SM00857 5 148 3.7E-52 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 PANTHER PTHR11444 6 455 8.9E-286 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 Gene3D G3DSA:1.10.275.10 1 119 2.0E-48 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 Gene3D G3DSA:1.20.200.10 120 389 9.0E-84 T 23-04-2016 CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 SUPERFAMILY SSF48557 6 447 2.67E-103 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 PANTHER PTHR11444:SF17 6 455 8.9E-286 T 23-04-2016 CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 452 6.2E-133 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 Gene3D G3DSA:1.10.40.30 390 445 1.5E-32 T 23-04-2016 CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.7E-51 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 Pfam PF00206 Lyase 14 312 4.8E-64 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 5.8E-18 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 5.8E-18 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.8E-18 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS06150 48a4688783366cb71ada9d341a3c481d 459 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.8E-18 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS03845 7a8dc5fc993b94f82e31e4e55a5894bb 269 Gene3D G3DSA:3.40.50.1820 16 265 1.3E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS03845 7a8dc5fc993b94f82e31e4e55a5894bb 269 PANTHER PTHR10992 12 267 7.8E-30 T 23-04-2016 CYCME_RS03845 7a8dc5fc993b94f82e31e4e55a5894bb 269 SUPERFAMILY SSF53474 18 266 1.21E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS03845 7a8dc5fc993b94f82e31e4e55a5894bb 269 PANTHER PTHR10992:SF107 12 267 7.8E-30 T 23-04-2016 CYCME_RS03845 7a8dc5fc993b94f82e31e4e55a5894bb 269 Pfam PF12697 Alpha/beta hydrolase family 27 256 3.4E-19 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS12355 2c161216eba09b7f776552409a062d71 198 Gene3D G3DSA:3.40.30.10 2 194 5.1E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS12355 2c161216eba09b7f776552409a062d71 198 Pfam PF01323 DSBA-like thioredoxin domain 5 194 6.8E-48 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CYCME_RS12355 2c161216eba09b7f776552409a062d71 198 PIRSF PIRSF006386 1 198 1.7E-67 T 23-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa CYCME_RS12355 2c161216eba09b7f776552409a062d71 198 PANTHER PTHR13887 1 196 2.1E-26 T 23-04-2016 CYCME_RS12355 2c161216eba09b7f776552409a062d71 198 PANTHER PTHR13887:SF22 1 196 2.1E-26 T 23-04-2016 CYCME_RS12355 2c161216eba09b7f776552409a062d71 198 SUPERFAMILY SSF52833 4 195 1.28E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-37 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 PANTHER PTHR23321 5 88 5.3E-45 T 23-04-2016 CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.952 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 SUPERFAMILY SSF47060 5 89 2.91E-35 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 7.0E-24 T 23-04-2016 CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.4E-39 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 Gene3D G3DSA:1.10.287.10 5 89 4.7E-39 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS04340 da5fca66720d18174b7d9ab3cc7aa180 89 SMART SM01387 8 88 8.5E-53 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS11590 b1eb1d8ce05f7c310a0d4eb528d7a85c 207 PANTHER PTHR30231 9 200 1.3E-95 T 23-04-2016 CYCME_RS11590 b1eb1d8ce05f7c310a0d4eb528d7a85c 207 Gene3D G3DSA:3.30.420.10 8 202 8.7E-50 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS11590 b1eb1d8ce05f7c310a0d4eb528d7a85c 207 TIGRFAM TIGR01298 RNaseT: ribonuclease T 9 203 4.8E-94 T 23-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CYCME_RS11590 b1eb1d8ce05f7c310a0d4eb528d7a85c 207 SUPERFAMILY SSF53098 7 201 3.19E-50 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS11590 b1eb1d8ce05f7c310a0d4eb528d7a85c 207 PANTHER PTHR30231:SF2 9 200 1.3E-95 T 23-04-2016 CYCME_RS11590 b1eb1d8ce05f7c310a0d4eb528d7a85c 207 Hamap MF_00157 Ribonuclease T [rnt]. 1 207 94.512 T 23-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CYCME_RS11590 b1eb1d8ce05f7c310a0d4eb528d7a85c 207 SMART SM00479 17 202 1.2E-24 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CYCME_RS11590 b1eb1d8ce05f7c310a0d4eb528d7a85c 207 Pfam PF00929 Exonuclease 19 193 6.8E-28 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PANTHER PTHR11670 724 865 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PANTHER PTHR11670 5 681 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 166 174 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 209 224 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 364 378 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 468 481 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 271 284 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 195 208 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 406 417 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 142 155 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PRINTS PR00415 Aconitase family signature 285 298 6.3E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 1.3E-147 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 Gene3D G3DSA:3.30.499.10 26 230 1.3E-61 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 Gene3D G3DSA:3.40.1060.10 231 363 5.0E-33 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 SUPERFAMILY SSF53732 12 596 1.83E-185 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 863 0.0 T 23-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 Pfam PF00694 Aconitase C-terminal domain 661 792 2.5E-29 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PANTHER PTHR11670:SF43 724 865 0.0 T 23-04-2016 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 PANTHER PTHR11670:SF43 5 681 0.0 T 23-04-2016 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 Gene3D G3DSA:3.30.499.10 364 550 1.2E-54 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 Gene3D G3DSA:3.20.19.10 610 861 1.2E-61 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 SUPERFAMILY SSF52016 603 861 8.04E-66 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYCME_RS11715 118583b95713ef5afc85586bdb3dfd59 868 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 860 4.6E-287 T 23-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 CYCME_RS12535 1e45cdc8679585c553838d2f77c80068 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS12535 1e45cdc8679585c553838d2f77c80068 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.855 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS12535 1e45cdc8679585c553838d2f77c80068 44 PANTHER PTHR14503 1 44 1.7E-22 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS12535 1e45cdc8679585c553838d2f77c80068 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-12 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS12535 1e45cdc8679585c553838d2f77c80068 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 7.5E-27 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS12535 1e45cdc8679585c553838d2f77c80068 44 Pfam PF00468 Ribosomal protein L34 1 44 2.0E-25 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 Pfam PF02261 Aspartate decarboxylase 1 114 5.5E-46 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 PIRSF PIRSF006246 1 126 2.9E-47 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 5.6E-49 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 66.594 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 SUPERFAMILY SSF50692 1 122 2.49E-46 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 PANTHER PTHR21012:SF0 2 126 5.9E-58 T 23-04-2016 CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 PANTHER PTHR21012 2 126 5.9E-58 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 Gene3D G3DSA:2.40.40.20 1 124 8.3E-51 T 23-04-2016 CYCME_RS10815 c4974b5d5a50ca3dedf587f6464599fe 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-45 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 SUPERFAMILY SSF142984 400 482 1.23E-20 T 23-04-2016 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 Pfam PF10531 SLBB domain 402 450 2.3E-7 T 23-04-2016 IPR019554 Soluble ligand binding domain CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 326 341 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 216 378 4.0E-43 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 SUPERFAMILY SSF140490 487 563 2.75E-21 T 23-04-2016 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 500 511 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 SUPERFAMILY SSF142019 176 395 4.45E-66 T 23-04-2016 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 491 563 3.2E-19 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 PANTHER PTHR11780:SF10 186 563 2.3E-136 T 23-04-2016 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 PANTHER PTHR11780 186 563 2.3E-136 T 23-04-2016 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 SMART SM00928 487 532 2.1E-5 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 36 168 4.7E-26 T 23-04-2016 CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 SUPERFAMILY SSF52833 29 194 5.26E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS05030 56b060e325f6bcb4e88dd6252e1079ea 563 Gene3D G3DSA:3.40.30.10 107 164 8.0E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 SUPERFAMILY SSF51735 1 152 1.61E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 PANTHER PTHR10836:SF50 1 323 7.0E-123 T 23-04-2016 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 5.8E-19 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 5.8E-19 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 259 274 5.8E-19 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 5.8E-19 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 302 6.4E-33 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 2.5E-44 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 Gene3D G3DSA:3.40.50.720 2 161 1.5E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 SUPERFAMILY SSF55347 153 304 2.43E-40 T 23-04-2016 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 Gene3D G3DSA:3.30.360.10 162 305 1.2E-39 T 23-04-2016 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 SMART SM00846 3 153 5.0E-55 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 PIRSF PIRSF000149 1 323 6.7E-97 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS01840 42fcd80e8736de508070c2fc7b363b15 323 PANTHER PTHR10836 1 323 7.0E-123 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 48 212 9.9E-62 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 PANTHER PTHR11934 2 216 6.1E-122 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 2 216 33.807 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 PANTHER PTHR11934:SF11 2 216 6.1E-122 T 23-04-2016 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 SUPERFAMILY SSF100950 2 145 7.78E-46 T 23-04-2016 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 SUPERFAMILY SSF75445 126 197 5.1E-24 T 23-04-2016 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 Gene3D G3DSA:3.40.50.1360 4 139 1.7E-57 T 23-04-2016 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 213 1.6E-68 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CYCME_RS02320 e07987c6582edb9647bb5f3c5c9de9f8 218 Gene3D G3DSA:3.30.70.260 140 195 7.7E-29 T 23-04-2016 CYCME_RS09335 a94c7a1c8dd16ef1b18eaed96de03271 289 PANTHER PTHR10361:SF24 1 270 2.7E-75 T 23-04-2016 CYCME_RS09335 a94c7a1c8dd16ef1b18eaed96de03271 289 Pfam PF01758 Sodium Bile acid symporter family 7 189 2.1E-32 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS09335 a94c7a1c8dd16ef1b18eaed96de03271 289 PANTHER PTHR10361 1 270 2.7E-75 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 Gene3D G3DSA:3.30.70.1430 46 142 1.5E-24 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 SUPERFAMILY SSF82714 716 799 1.1E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 SUPERFAMILY SSF82693 137 184 2.04E-23 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PANTHER PTHR32063:SF19 2 1032 0.0 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 SUPERFAMILY SSF82693 46 128 4.19E-20 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 SUPERFAMILY SSF82866 800 1035 6.8E-44 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 3.3E-244 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.0E-33 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.0E-33 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.0E-33 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.0E-33 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.0E-33 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.0E-33 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.0E-33 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 SUPERFAMILY SSF82693 271 328 2.04E-23 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 SUPERFAMILY SSF82714 185 269 1.44E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 PANTHER PTHR32063 2 1032 0.0 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 Gene3D G3DSA:1.10.3850.10 807 1035 5.5E-51 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 Gene3D G3DSA:1.10.3850.10 283 500 2.4E-64 T 23-04-2016 CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 Gene3D G3DSA:3.30.2090.10 185 268 5.1E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 Gene3D G3DSA:3.30.2090.10 717 797 1.2E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06455 816da41832039285a97c0ea047e754d7 1046 SUPERFAMILY SSF82866 294 498 1.7E-40 T 23-04-2016 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 SUPERFAMILY SSF52518 7 198 4.29E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 SUPERFAMILY SSF52518 242 380 4.29E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 PANTHER PTHR11624 23 217 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 PANTHER PTHR11624 240 622 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 281 2.5E-122 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 Pfam PF02780 Transketolase, C-terminal domain 494 610 4.8E-32 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 619 45.908 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 Gene3D G3DSA:3.40.50.970 26 200 2.1E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 Gene3D G3DSA:3.40.50.970 241 333 2.1E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 Pfam PF02779 Transketolase, pyrimidine binding domain 318 478 5.6E-39 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 ProSitePatterns PS00802 Transketolase signature 2. 424 440 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 SUPERFAMILY SSF52518 317 504 3.62E-61 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 SUPERFAMILY SSF52922 491 619 1.96E-32 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 Gene3D G3DSA:3.40.50.970 334 494 2.5E-35 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 SMART SM00861 318 482 1.8E-67 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 618 8.6E-276 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 Gene3D G3DSA:3.40.50.920 495 617 1.1E-34 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 PANTHER PTHR11624:SF20 23 217 0.0 T 23-04-2016 CYCME_RS05045 e53fc7344dd707ca10ac4de71a583f51 623 PANTHER PTHR11624:SF20 240 622 0.0 T 23-04-2016 CYCME_RS06205 f5dafff619ca18984528e3457ee0471a 230 PANTHER PTHR30098 1 228 5.5E-78 T 23-04-2016 CYCME_RS06205 f5dafff619ca18984528e3457ee0471a 230 SUPERFAMILY SSF55729 6 227 8.9E-92 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS06205 f5dafff619ca18984528e3457ee0471a 230 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 206 3.0E-75 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CYCME_RS06205 f5dafff619ca18984528e3457ee0471a 230 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 215 4.2E-68 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CYCME_RS06205 f5dafff619ca18984528e3457ee0471a 230 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 230 92.257 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CYCME_RS10380 72347a4694ce03471433f0cad96308ff 493 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 22 455 1.5E-96 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CYCME_RS10380 72347a4694ce03471433f0cad96308ff 493 PANTHER PTHR30108:SF11 3 463 2.4E-136 T 23-04-2016 CYCME_RS10380 72347a4694ce03471433f0cad96308ff 493 SUPERFAMILY SSF50475 21 324 2.98E-66 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CYCME_RS10380 72347a4694ce03471433f0cad96308ff 493 PANTHER PTHR30108 3 463 2.4E-136 T 23-04-2016 CYCME_RS10380 72347a4694ce03471433f0cad96308ff 493 SUPERFAMILY SSF143968 328 460 2.88E-36 T 23-04-2016 CYCME_RS10380 72347a4694ce03471433f0cad96308ff 493 Gene3D G3DSA:3.40.1670.10 342 454 3.4E-30 T 23-04-2016 CYCME_RS10380 72347a4694ce03471433f0cad96308ff 493 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 26 431 1.5E-92 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 PANTHER PTHR11963:SF13 8 494 6.7E-193 T 23-04-2016 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 3.2E-50 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 3.2E-50 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 3.2E-50 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 3.2E-50 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 3.2E-50 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 494 35.888 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 PANTHER PTHR11963 8 494 6.7E-193 T 23-04-2016 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 487 3.1E-118 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 SUPERFAMILY SSF53187 180 493 1.82E-119 T 23-04-2016 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 20 143 2.7E-22 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 SUPERFAMILY SSF52949 1 183 4.77E-31 T 23-04-2016 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 Gene3D G3DSA:3.40.630.10 180 493 5.6E-132 T 23-04-2016 CYCME_RS10945 0303b91bfc73744b59e953059f49c354 495 Gene3D G3DSA:3.40.220.10 1 156 1.7E-35 T 23-04-2016 CYCME_RS12335 c1ea52a4d9977f3796ca0cc35e160858 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 18 203 26.442 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CYCME_RS12335 c1ea52a4d9977f3796ca0cc35e160858 207 PIRSF PIRSF003078 4 207 4.1E-52 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CYCME_RS12335 c1ea52a4d9977f3796ca0cc35e160858 207 Gene3D G3DSA:3.40.50.150 9 204 1.4E-59 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS12335 c1ea52a4d9977f3796ca0cc35e160858 207 PANTHER PTHR31760:SF0 7 170 7.0E-58 T 23-04-2016 CYCME_RS12335 c1ea52a4d9977f3796ca0cc35e160858 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 31 204 1.7E-52 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CYCME_RS12335 c1ea52a4d9977f3796ca0cc35e160858 207 SUPERFAMILY SSF53335 10 204 4.22E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS12335 c1ea52a4d9977f3796ca0cc35e160858 207 PANTHER PTHR31760 7 170 7.0E-58 T 23-04-2016 CYCME_RS12335 c1ea52a4d9977f3796ca0cc35e160858 207 Pfam PF02527 rRNA small subunit methyltransferase G 26 195 2.7E-54 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 Gene3D G3DSA:3.40.50.980 217 380 2.8E-40 T 23-04-2016 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 PANTHER PTHR24096 176 551 6.3E-167 T 23-04-2016 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 PANTHER PTHR24096 9 153 6.3E-167 T 23-04-2016 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 Gene3D G3DSA:3.40.50.980 24 152 7.8E-37 T 23-04-2016 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 Gene3D G3DSA:3.40.50.980 185 216 7.8E-37 T 23-04-2016 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 Pfam PF00501 AMP-binding enzyme 29 461 1.5E-105 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 Gene3D G3DSA:3.30.300.30 456 552 5.4E-31 T 23-04-2016 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 Gene3D G3DSA:2.30.38.10 381 452 1.6E-29 T 23-04-2016 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 SUPERFAMILY SSF56801 21 552 1.7E-146 T 23-04-2016 CYCME_RS09200 05c67e8de75efe16dca3774d32286770 553 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.6E-24 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 SUPERFAMILY SSF117916 9 81 7.19E-12 T 23-04-2016 CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 PANTHER PTHR23264:SF19 1 357 4.7E-159 T 23-04-2016 CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 SUPERFAMILY SSF52540 100 342 4.23E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 PANTHER PTHR23264 1 357 4.7E-159 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 Pfam PF01883 Domain of unknown function DUF59 9 78 3.3E-11 T 23-04-2016 IPR002744 Domain of unknown function DUF59 CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 98 340 1.4E-101 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 Gene3D G3DSA:3.40.50.300 93 339 5.9E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00830 74da0fec3ad40d191c1a52ca1aa58509 361 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 341 37.616 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CYCME_RS07830 49586dae6571a108d058d3a673b23274 206 PANTHER PTHR30086 1 203 4.5E-36 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CYCME_RS07830 49586dae6571a108d058d3a673b23274 206 Pfam PF01810 LysE type translocator 15 204 7.9E-29 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CYCME_RS07830 49586dae6571a108d058d3a673b23274 206 PANTHER PTHR30086:SF14 1 203 4.5E-36 T 23-04-2016 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 Gene3D G3DSA:1.10.300.10 103 196 1.8E-35 T 23-04-2016 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 PANTHER PTHR11846 1 428 6.2E-238 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 8.6E-179 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 5.6E-173 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 Gene3D G3DSA:3.90.170.10 267 425 5.6E-68 T 23-04-2016 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 208.313 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 Gene3D G3DSA:3.40.440.10 197 266 1.9E-67 T 23-04-2016 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 Gene3D G3DSA:3.40.440.10 3 94 1.9E-67 T 23-04-2016 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 SMART SM00788 4 424 1.2E-288 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 CYCME_RS04490 70884922b17f87d452ce45321d7038ac 430 SUPERFAMILY SSF52540 3 429 7.44E-176 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05545 d93958316360195d5ecd03be89802353 175 SUPERFAMILY SSF52218 1 159 1.81E-33 T 23-04-2016 IPR029039 Flavoprotein-like domain CYCME_RS05545 d93958316360195d5ecd03be89802353 175 Pfam PF03358 NADPH-dependent FMN reductase 1 124 9.5E-27 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CYCME_RS05545 d93958316360195d5ecd03be89802353 175 Gene3D G3DSA:3.40.50.360 1 170 6.6E-30 T 23-04-2016 IPR029039 Flavoprotein-like domain CYCME_RS05545 d93958316360195d5ecd03be89802353 175 PANTHER PTHR30543:SF6 1 149 2.0E-30 T 23-04-2016 CYCME_RS05545 d93958316360195d5ecd03be89802353 175 PANTHER PTHR30543 1 149 2.0E-30 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 SMART SM00842 10 196 3.0E-102 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CYCME_RS11095 29478171defc143db733e58f3451e134 409 SUPERFAMILY SSF53067 9 197 2.59E-61 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 SUPERFAMILY SSF53067 198 377 2.59E-51 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Gene3D G3DSA:3.90.640.10 235 297 3.2E-21 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 PANTHER PTHR32432 1 383 7.5E-168 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 409 32.088 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Gene3D G3DSA:3.30.420.40 2 83 6.1E-26 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Gene3D G3DSA:3.30.420.40 158 209 6.1E-26 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Pfam PF14450 Cell division protein FtsA 207 374 5.4E-25 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Pfam PF14450 Cell division protein FtsA 11 187 3.1E-11 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Gene3D G3DSA:3.30.1490.110 97 157 4.5E-18 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 PANTHER PTHR32432:SF4 1 383 7.5E-168 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 377 8.5E-154 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CYCME_RS11095 29478171defc143db733e58f3451e134 409 PIRSF PIRSF003101 1 409 2.5E-158 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 2.1E-31 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Gene3D G3DSA:3.30.420.40 210 234 2.4E-35 T 23-04-2016 CYCME_RS11095 29478171defc143db733e58f3451e134 409 Gene3D G3DSA:3.30.420.40 298 352 2.4E-35 T 23-04-2016 CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 Pfam PF00483 Nucleotidyl transferase 3 282 1.9E-72 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 Gene3D G3DSA:2.60.120.10 354 465 1.1E-45 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 Gene3D G3DSA:3.90.550.10 1 267 3.2E-99 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 464 1.1E-223 T 23-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 PANTHER PTHR12526:SF387 348 465 7.1E-105 T 23-04-2016 CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 PANTHER PTHR12526:SF387 152 285 7.1E-105 T 23-04-2016 CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 Pfam PF01050 Mannose-6-phosphate isomerase 311 461 4.1E-70 T 23-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 SUPERFAMILY SSF53448 1 277 2.58E-74 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 SUPERFAMILY SSF51182 181 465 1.21E-83 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 PANTHER PTHR12526 348 465 7.1E-105 T 23-04-2016 CYCME_RS07180 6a4f19b149980304bf5d191764110a80 466 PANTHER PTHR12526 152 285 7.1E-105 T 23-04-2016 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 Pfam PF03845 Spore germination protein 109 199 2.0E-6 T 23-04-2016 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 SUPERFAMILY SSF55874 289 424 6.16E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 423 2.9E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 PANTHER PTHR24423 189 424 3.5E-22 T 23-04-2016 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 PANTHER PTHR24423 1 27 3.5E-22 T 23-04-2016 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 Gene3D G3DSA:3.30.565.10 313 424 1.3E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 SMART SM00387 322 426 5.6E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 SUPERFAMILY SSF47384 208 274 4.12E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 PANTHER PTHR24423:SF427 189 424 3.5E-22 T 23-04-2016 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 PANTHER PTHR24423:SF427 1 27 3.5E-22 T 23-04-2016 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.3E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 1.3E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.3E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS04385 d1ce2d3ffef6351f46c44b6761b23a0d 426 SMART SM00388 212 280 0.0057 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS03805 bafe7be9f623619c24b68302fa4e7225 527 SUPERFAMILY SSF55931 8 517 3.66E-190 T 23-04-2016 CYCME_RS03805 bafe7be9f623619c24b68302fa4e7225 527 PANTHER PTHR38761 2 527 1.9E-213 T 23-04-2016 CYCME_RS03805 bafe7be9f623619c24b68302fa4e7225 527 Pfam PF04262 Glutamate-cysteine ligase 10 382 2.6E-167 T 23-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 CYCME_RS03805 bafe7be9f623619c24b68302fa4e7225 527 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 16 519 2.5E-185 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 CYCME_RS03805 bafe7be9f623619c24b68302fa4e7225 527 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 527 201.558 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 CYCME_RS01415 f6730d26988057677c5a7a823042288d 571 SUPERFAMILY SSF69593 73 242 1.96E-11 T 23-04-2016 CYCME_RS01415 f6730d26988057677c5a7a823042288d 571 SUPERFAMILY SSF55729 308 467 4.24E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS01415 f6730d26988057677c5a7a823042288d 571 Gene3D G3DSA:3.40.630.30 319 419 6.8E-4 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS01415 f6730d26988057677c5a7a823042288d 571 Pfam PF13444 Acetyltransferase (GNAT) domain 325 426 1.3E-23 T 23-04-2016 CYCME_RS01415 f6730d26988057677c5a7a823042288d 571 SMART SM00563 82 199 1.6E-8 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CYCME_RS01415 f6730d26988057677c5a7a823042288d 571 Pfam PF01553 Acyltransferase 74 196 4.4E-10 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CYCME_RS01415 f6730d26988057677c5a7a823042288d 571 PANTHER PTHR37323:SF1 1 570 4.1E-83 T 23-04-2016 CYCME_RS01415 f6730d26988057677c5a7a823042288d 571 PANTHER PTHR37323 1 570 4.1E-83 T 23-04-2016 CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 PANTHER PTHR22778 1 159 1.8E-48 T 23-04-2016 CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 Gene3D G3DSA:3.40.430.10 1 159 3.2E-62 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 Pfam PF00186 Dihydrofolate reductase 1 159 5.7E-65 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 PRINTS PR00070 Dihydrofolate reductase signature 40 51 2.7E-13 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 2.7E-13 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 PRINTS PR00070 Dihydrofolate reductase signature 27 35 2.7E-13 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 PRINTS PR00070 Dihydrofolate reductase signature 13 23 2.7E-13 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 SUPERFAMILY SSF53597 1 159 1.82E-58 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 PANTHER PTHR22778:SF16 1 159 1.8E-48 T 23-04-2016 CYCME_RS02815 1055e199221d40e189891c41ede666e4 160 PIRSF PIRSF000194 1 160 3.0E-63 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PIRSF PIRSF002111 1 534 2.0E-208 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Gene3D G3DSA:2.40.50.140 102 172 8.5E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Gene3D G3DSA:2.40.50.140 22 101 9.7E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PANTHER PTHR10724:SF6 1 514 5.8E-240 T 23-04-2016 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SUPERFAMILY SSF50249 103 185 6.14E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SUPERFAMILY SSF50249 255 364 8.58E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Gene3D G3DSA:2.40.50.140 444 521 3.6E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Gene3D G3DSA:2.40.50.140 279 364 4.4E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Gene3D G3DSA:2.40.50.140 184 262 2.3E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Pfam PF00575 S1 RNA binding domain 276 347 1.3E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Pfam PF00575 S1 RNA binding domain 103 171 3.8E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Pfam PF00575 S1 RNA binding domain 190 260 4.1E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Pfam PF00575 S1 RNA binding domain 450 520 6.9E-14 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Pfam PF00575 S1 RNA binding domain 361 434 5.9E-17 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SUPERFAMILY SSF50249 362 447 5.97E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.4E-82 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 6.6E-209 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SMART SM00316 362 434 2.1E-18 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SMART SM00316 190 260 5.7E-28 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SMART SM00316 449 520 2.0E-18 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SMART SM00316 19 87 0.013 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SMART SM00316 275 347 9.1E-24 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SMART SM00316 103 171 2.2E-9 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SUPERFAMILY SSF50249 429 535 4.58E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SUPERFAMILY SSF50249 1 112 1.94E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 Gene3D G3DSA:2.40.50.140 365 443 1.8E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 PANTHER PTHR10724 1 514 5.8E-240 T 23-04-2016 CYCME_RS09255 6ff14733d0aaf4b6ea143d90469ddea1 555 SUPERFAMILY SSF50249 189 277 1.42E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 Gene3D G3DSA:3.30.230.40 3 90 1.6E-37 T 23-04-2016 CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 3.6E-63 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 SUPERFAMILY SSF54211 4 88 7.33E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 PANTHER PTHR23133:SF2 1 197 3.0E-100 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 SUPERFAMILY SSF54211 90 180 6.7E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 Gene3D G3DSA:3.30.230.40 92 197 5.5E-31 T 23-04-2016 CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 PANTHER PTHR23133 1 197 3.0E-100 T 23-04-2016 CYCME_RS01525 42ca6dfbb294586633564cef104d6ca6 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 42.346 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 TIGRFAM TIGR00886 2A0108: nitrite transporter 15 432 7.9E-96 T 23-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 Gene3D G3DSA:1.20.1250.20 19 197 2.8E-23 T 23-04-2016 CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 Gene3D G3DSA:1.20.1250.20 292 475 1.6E-26 T 23-04-2016 CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 Pfam PF07690 Major Facilitator Superfamily 21 248 1.0E-24 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 Pfam PF07690 Major Facilitator Superfamily 299 479 4.9E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 PANTHER PTHR23515 290 465 3.6E-75 T 23-04-2016 CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 PANTHER PTHR23515 15 216 3.6E-75 T 23-04-2016 CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 SUPERFAMILY SSF103473 8 202 5.62E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS08600 30c63d7da5cb85329d4c2156a739fa73 488 SUPERFAMILY SSF103473 273 475 5.62E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 Pfam PF12848 ABC transporter 219 291 6.4E-10 T 23-04-2016 IPR032781 ABC-transporter extension domain CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 SUPERFAMILY SSF52540 309 511 1.73E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 Gene3D G3DSA:3.40.50.300 2 265 6.9E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 Gene3D G3DSA:3.40.50.300 313 537 8.7E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 SUPERFAMILY SSF52540 4 226 1.01E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 SMART SM00382 339 509 3.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 SMART SM00382 28 225 2.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 Pfam PF00005 ABC transporter 19 180 3.5E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 Pfam PF00005 ABC transporter 331 464 4.9E-19 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 PANTHER PTHR19211 1 561 4.7E-221 T 23-04-2016 CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 PANTHER PTHR19211:SF45 1 561 4.7E-221 T 23-04-2016 CYCME_RS09575 67d9944d618c062d125ed3ee3c1985c6 623 Pfam PF16326 ABC transporter C-terminal domain 551 619 2.0E-15 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 PANTHER PTHR22754 71 559 3.5E-82 T 23-04-2016 CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 Gene3D G3DSA:3.40.50.980 6 173 1.1E-20 T 23-04-2016 CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 Pfam PF00550 Phosphopantetheine attachment site 583 647 5.8E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 SUPERFAMILY SSF56801 369 554 1.18E-87 T 23-04-2016 CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 SUPERFAMILY SSF56801 7 341 1.18E-87 T 23-04-2016 CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 Gene3D G3DSA:2.30.38.10 374 446 4.5E-18 T 23-04-2016 CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 Gene3D G3DSA:1.10.1200.10 571 650 5.4E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 Pfam PF00501 AMP-binding enzyme 25 453 2.0E-66 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 SUPERFAMILY SSF47336 578 648 1.09E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 Gene3D G3DSA:3.30.300.30 447 550 8.8E-11 T 23-04-2016 CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS05460 ba310002937aaba9f01e24e5b3399676 653 Gene3D G3DSA:3.40.50.980 174 337 3.1E-38 T 23-04-2016 CYCME_RS05780 78a34f8d1e3c072ccb1cbb70397304b3 381 Gene3D G3DSA:3.40.50.10540 8 223 5.5E-96 T 23-04-2016 IPR023606 CoA-transferase family III domain CYCME_RS05780 78a34f8d1e3c072ccb1cbb70397304b3 381 Gene3D G3DSA:3.40.50.10540 312 378 5.5E-96 T 23-04-2016 IPR023606 CoA-transferase family III domain CYCME_RS05780 78a34f8d1e3c072ccb1cbb70397304b3 381 SUPERFAMILY SSF89796 9 377 4.71E-115 T 23-04-2016 IPR023606 CoA-transferase family III domain CYCME_RS05780 78a34f8d1e3c072ccb1cbb70397304b3 381 PANTHER PTHR24023:SF593 93 347 1.4E-29 T 23-04-2016 CYCME_RS05780 78a34f8d1e3c072ccb1cbb70397304b3 381 PANTHER PTHR24023 93 347 1.4E-29 T 23-04-2016 CYCME_RS05780 78a34f8d1e3c072ccb1cbb70397304b3 381 Pfam PF02515 CoA-transferase family III 11 376 1.0E-117 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CYCME_RS05780 78a34f8d1e3c072ccb1cbb70397304b3 381 Gene3D G3DSA:3.30.1540.10 229 311 1.9E-21 T 23-04-2016 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 SUPERFAMILY SSF53955 158 365 6.47E-67 T 23-04-2016 IPR023346 Lysozyme-like domain CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 Gene3D G3DSA:1.20.5.100 20 57 5.9E-5 T 23-04-2016 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 Gene3D G3DSA:3.40.710.10 346 763 6.5E-103 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 Pfam PF00912 Transglycosylase 172 344 2.0E-57 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 Gene3D G3DSA:1.10.3810.10 172 345 3.3E-64 T 23-04-2016 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 PIRSF PIRSF002799 2 784 3.3E-304 T 23-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 PANTHER PTHR32282:SF11 159 759 1.6E-225 T 23-04-2016 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 Pfam PF14814 Bifunctional transglycosylase second domain 76 160 2.7E-21 T 23-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 679 1.6E-13 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 Gene3D G3DSA:3.30.2060.10 74 162 1.4E-19 T 23-04-2016 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 PANTHER PTHR32282 159 759 1.6E-225 T 23-04-2016 CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 SUPERFAMILY SSF56601 376 772 3.45E-111 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 SUPERFAMILY SSF56601 325 347 3.45E-111 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS09030 533269b3f5779fadf91888c6b624170b 785 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 31 757 5.8E-269 T 23-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 ProSitePatterns PS00674 AAA-protein family signature. 298 316 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 SMART SM00382 191 330 1.2E-24 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 SUPERFAMILY SSF52540 150 398 2.52E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 Pfam PF01434 Peptidase family M41 389 597 3.4E-79 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 Gene3D G3DSA:1.10.8.60 339 412 8.7E-27 T 23-04-2016 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 PANTHER PTHR23076 1 634 0.0 T 23-04-2016 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 7 611 36.907 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 Pfam PF06480 FtsH Extracellular 8 88 5.4E-14 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 195 327 1.3E-45 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 SUPERFAMILY SSF140990 409 608 1.57E-71 T 23-04-2016 CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 Gene3D G3DSA:3.40.50.300 154 338 5.5E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04975 8d1ba23214b2305ee15d9028d925239c 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 598 1.1E-235 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 3.3E-281 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 Gene3D G3DSA:3.40.50.300 2 206 2.8E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 SUPERFAMILY SSF54980 302 387 2.48E-15 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 Gene3D G3DSA:3.30.70.870 304 399 7.8E-38 T 23-04-2016 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 Pfam PF03144 Elongation factor Tu domain 2 219 289 3.7E-11 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 PANTHER PTHR23115 2 602 2.0E-281 T 23-04-2016 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 139 9.4E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 Gene3D G3DSA:2.40.50.250 483 577 6.9E-39 T 23-04-2016 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 Pfam PF00679 Elongation factor G C-terminus 396 477 1.7E-18 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 PANTHER PTHR23115:SF14 2 602 2.0E-281 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 SUPERFAMILY SSF52540 3 219 3.45E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 6.2E-56 T 23-04-2016 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 Gene3D G3DSA:2.40.30.10 207 303 9.0E-26 T 23-04-2016 CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 Gene3D G3DSA:3.30.70.240 400 478 2.7E-29 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 SUPERFAMILY SSF54980 398 512 9.11E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS01540 38e8f69351de56c900a6f2cbe21f2dd9 606 SUPERFAMILY SSF50447 151 299 1.98E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 TIGRFAM TIGR02082 metH: methionine synthase 14 1200 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Gene3D G3DSA:3.20.20.20 367 631 1.2E-112 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Gene3D G3DSA:3.10.196.10 965 1235 3.2E-112 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Gene3D G3DSA:1.10.1240.10 656 742 2.4E-39 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Pfam PF02574 Homocysteine S-methyltransferase 19 327 1.3E-89 T 23-04-2016 IPR003726 Homocysteine-binding domain CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Pfam PF02310 B12 binding domain 754 844 2.4E-21 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Gene3D G3DSA:3.40.50.280 750 900 5.0E-66 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 PANTHER PTHR21091:SF112 12 400 5.4E-162 T 23-04-2016 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 PIRSF PIRSF000381 3 1203 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 SUPERFAMILY SSF47644 658 744 4.05E-28 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Gene3D G3DSA:3.20.20.330 3 366 1.4E-122 T 23-04-2016 IPR003726 Homocysteine-binding domain CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Pfam PF00809 Pterin binding enzyme 362 600 9.4E-60 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 SUPERFAMILY SSF82282 8 401 1.12E-115 T 23-04-2016 IPR003726 Homocysteine-binding domain CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 SMART SM01018 662 745 5.2E-44 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 SUPERFAMILY SSF52242 750 900 7.98E-48 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 PANTHER PTHR21091 12 400 5.4E-162 T 23-04-2016 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 SUPERFAMILY SSF51717 359 628 2.88E-89 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 SUPERFAMILY SSF56507 908 1235 3.4E-133 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 945 1216 1.2E-129 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CYCME_RS02675 236df8a05b2e0633072b828de9e347af 1237 Pfam PF02607 B12 binding domain 665 737 9.0E-24 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CYCME_RS11445 f150eabddcd73cfd72d00fc01eb5d787 416 Pfam PF01384 Phosphate transporter family 22 404 7.8E-125 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 CYCME_RS11445 f150eabddcd73cfd72d00fc01eb5d787 416 PANTHER PTHR11101 1 415 1.2E-213 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 CYCME_RS11445 f150eabddcd73cfd72d00fc01eb5d787 416 PANTHER PTHR11101:SF63 1 415 1.2E-213 T 23-04-2016 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 160 428 2.0E-28 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 PANTHER PTHR21266 16 226 6.9E-62 T 23-04-2016 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 SUPERFAMILY SSF55961 158 435 3.45E-62 T 23-04-2016 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 Pfam PF00355 Rieske [2Fe-2S] domain 40 122 1.8E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 SUPERFAMILY SSF50022 9 156 2.36E-47 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 82 105 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 Gene3D G3DSA:3.90.380.10 146 440 7.2E-95 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 3.4E-55 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 181 203 3.4E-55 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 54 69 3.4E-55 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 96 116 3.4E-55 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 75 95 3.4E-55 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 140 166 3.4E-55 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 Gene3D G3DSA:2.102.10.10 40 145 1.2E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01830 dd7460ca9106bdf7edc5f731cda66854 451 PANTHER PTHR21266:SF30 16 226 6.9E-62 T 23-04-2016 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 Gene3D G3DSA:3.10.20.30 11 106 1.2E-24 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 316 324 6.0E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 160 167 6.0E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 143 155 6.0E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 240 6.0E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 246 255 6.0E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00410 Phenol hydroxylase reductase family signature 206 215 6.0E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 Pfam PF00175 Oxidoreductase NAD-binding domain 223 329 2.6E-21 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 160 167 3.6E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 221 240 3.6E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 316 324 3.6E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 SUPERFAMILY SSF52343 203 346 7.33E-36 T 23-04-2016 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 50 58 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 Pfam PF00970 Oxidoreductase FAD-binding domain 119 211 7.8E-11 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 Gene3D G3DSA:3.40.50.80 215 348 2.2E-35 T 23-04-2016 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 19 94 1.3E-13 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PANTHER PTHR19370:SF32 50 348 2.1E-59 T 23-04-2016 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 SUPERFAMILY SSF54292 15 102 1.57E-24 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 PANTHER PTHR19370 50 348 2.1E-59 T 23-04-2016 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 Gene3D G3DSA:2.40.30.10 114 213 2.9E-22 T 23-04-2016 CYCME_RS03895 2802982ac1cffd615c77dd2cba738842 356 SUPERFAMILY SSF63380 115 213 9.14E-22 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CYCME_RS11960 625f56485a80d098521ce8267c2fe3c6 171 Pfam PF07275 Antirestriction protein (ArdA) 7 163 3.0E-47 T 23-04-2016 IPR009899 Antirestriction CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 4 434 40.007 T 23-04-2016 IPR023512 Deaminase MtaD/DadD GO:0019239 CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 SUPERFAMILY SSF51338 5 61 8.82E-27 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 SUPERFAMILY SSF51338 359 433 8.82E-27 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 Pfam PF01979 Amidohydrolase family 59 407 2.2E-72 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 Gene3D G3DSA:2.30.40.10 369 411 3.3E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 Gene3D G3DSA:2.30.40.10 14 63 3.3E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 Gene3D G3DSA:3.20.20.140 64 368 2.1E-97 T 23-04-2016 CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 PANTHER PTHR11271 2 435 6.3E-185 T 23-04-2016 CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 SUPERFAMILY SSF51556 61 360 5.96E-96 T 23-04-2016 IPR032466 Metal-dependent hydrolase CYCME_RS05745 bdf867203b091d15dddd2bb84a7c225e 444 PANTHER PTHR11271:SF7 2 435 6.3E-185 T 23-04-2016 CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 SUPERFAMILY SSF54211 133 276 1.14E-52 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 6.0E-109 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 SUPERFAMILY SSF54211 3 124 3.11E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 Gene3D G3DSA:3.30.230.20 3 125 7.6E-46 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 Gene3D G3DSA:3.30.1700.10 128 282 1.4E-60 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 4.9E-123 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 PANTHER PTHR33694 1 299 4.4E-133 T 23-04-2016 CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 PANTHER PTHR33694:SF1 1 299 4.4E-133 T 23-04-2016 CYCME_RS11085 70d05bc4362ce43aec44c0116bbcea79 304 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.659 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 SUPERFAMILY SSF46894 142 212 1.46E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 PANTHER PTHR26402:SF506 6 212 4.2E-63 T 23-04-2016 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 Pfam PF00072 Response regulator receiver domain 8 119 5.6E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 SMART SM00421 149 206 6.5E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.6E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 3.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 3.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 3.2E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 SMART SM00448 6 119 6.3E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 Gene3D G3DSA:1.10.10.10 126 212 3.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 Gene3D G3DSA:3.40.50.2300 2 125 6.5E-34 T 23-04-2016 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 PANTHER PTHR26402 6 212 4.2E-63 T 23-04-2016 CYCME_RS06755 01c7f31435b78dcbdcb6dd7053816d1f 215 SUPERFAMILY SSF52172 5 134 1.12E-32 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 Gene3D G3DSA:2.30.30.240 109 178 1.3E-26 T 23-04-2016 CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 Pfam PF01782 RimM N-terminal domain 19 100 4.8E-25 T 23-04-2016 IPR002676 RimM protein GO:0006364 CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 16 178 24.279 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 SUPERFAMILY SSF50447 16 102 5.83E-23 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 177 1.2E-50 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 SUPERFAMILY SSF50346 109 177 4.71E-18 T 23-04-2016 IPR011033 PRC-barrel-like CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 Gene3D G3DSA:2.40.30.60 10 102 1.7E-30 T 23-04-2016 IPR002676 RimM protein GO:0006364 CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 Pfam PF05239 PRC-barrel domain 107 173 2.9E-7 T 23-04-2016 IPR027275 PRC-barrel domain CYCME_RS08380 5395319aa55c87577797eff1fea35be6 178 PANTHER PTHR33692 16 178 8.5E-51 T 23-04-2016 CYCME_RS10180 94105119a766b1938de93e3670b9e3c5 343 SUPERFAMILY SSF51679 4 335 1.77E-66 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CYCME_RS10180 94105119a766b1938de93e3670b9e3c5 343 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 335 4.2E-103 T 23-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 CYCME_RS10180 94105119a766b1938de93e3670b9e3c5 343 Gene3D G3DSA:3.20.20.30 5 336 6.1E-73 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CYCME_RS10180 94105119a766b1938de93e3670b9e3c5 343 PANTHER PTHR30137:SF7 1 337 4.6E-95 T 23-04-2016 CYCME_RS10180 94105119a766b1938de93e3670b9e3c5 343 PANTHER PTHR30137 1 337 4.6E-95 T 23-04-2016 CYCME_RS10180 94105119a766b1938de93e3670b9e3c5 343 Pfam PF00296 Luciferase-like monooxygenase 24 308 1.2E-32 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CYCME_RS10400 cd4d087139fe725506c7d606dae8906d 481 Gene3D G3DSA:3.40.309.10 263 445 1.4E-65 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CYCME_RS10400 cd4d087139fe725506c7d606dae8906d 481 SUPERFAMILY SSF53720 2 475 2.62E-151 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS10400 cd4d087139fe725506c7d606dae8906d 481 Gene3D G3DSA:3.40.605.10 3 262 5.4E-81 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS10400 cd4d087139fe725506c7d606dae8906d 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS10400 cd4d087139fe725506c7d606dae8906d 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS10400 cd4d087139fe725506c7d606dae8906d 481 Pfam PF00171 Aldehyde dehydrogenase family 16 470 1.6E-152 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS10400 cd4d087139fe725506c7d606dae8906d 481 PANTHER PTHR11699 5 476 1.5E-189 T 23-04-2016 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 SUPERFAMILY SSF50249 607 686 7.46E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Gene3D G3DSA:2.40.50.140 613 687 2.1E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 315 1.6E-16 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Pfam PF03725 3' exoribonuclease family, domain 2 455 523 2.5E-6 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 2.4E-11 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 SUPERFAMILY SSF54211 287 483 9.11E-50 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Gene3D G3DSA:3.30.1370.10 547 612 2.9E-24 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 SMART SM00322 547 612 6.2E-12 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 1.6E-20 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Pfam PF01138 3' exoribonuclease family, domain 1 319 451 4.2E-22 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 688 30.686 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 PANTHER PTHR11252 2 687 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 PIRSF PIRSF005499 1 688 1.7E-295 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Gene3D G3DSA:1.10.10.400 225 309 4.4E-22 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 SMART SM00316 615 685 1.1E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Gene3D G3DSA:3.30.230.70 3 224 8.8E-82 T 23-04-2016 IPR027408 PNPase/RNase PH domain CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Gene3D G3DSA:3.30.230.70 310 534 3.1E-86 T 23-04-2016 IPR027408 PNPase/RNase PH domain CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Pfam PF00575 S1 RNA binding domain 614 685 6.7E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 SUPERFAMILY SSF54211 3 143 6.07E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 686 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 SUPERFAMILY SSF54791 550 634 4.17E-23 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 SUPERFAMILY SSF55666 445 544 1.96E-28 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 Pfam PF00013 KH domain 552 608 7.3E-10 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 PANTHER PTHR11252:SF0 2 687 0.0 T 23-04-2016 CYCME_RS04345 9e5f9c514be9bd739ef7abecf732a33d 688 SUPERFAMILY SSF55666 144 234 5.29E-29 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CYCME_RS00910 2a9b9dc66e5c1c9bd2cff633d46067c9 319 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 319 59.193 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 CYCME_RS00910 2a9b9dc66e5c1c9bd2cff633d46067c9 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 246 2.2E-42 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CYCME_RS00910 2a9b9dc66e5c1c9bd2cff633d46067c9 319 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 317 1.3E-131 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 CYCME_RS00910 2a9b9dc66e5c1c9bd2cff633d46067c9 319 PANTHER PTHR10366:SF469 1 318 6.7E-110 T 23-04-2016 CYCME_RS00910 2a9b9dc66e5c1c9bd2cff633d46067c9 319 SUPERFAMILY SSF51735 1 316 3.44E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS00910 2a9b9dc66e5c1c9bd2cff633d46067c9 319 PANTHER PTHR10366 1 318 6.7E-110 T 23-04-2016 CYCME_RS00910 2a9b9dc66e5c1c9bd2cff633d46067c9 319 Gene3D G3DSA:3.90.25.10 176 299 3.1E-34 T 23-04-2016 CYCME_RS00910 2a9b9dc66e5c1c9bd2cff633d46067c9 319 Gene3D G3DSA:3.40.50.720 2 175 3.0E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 PANTHER PTHR15680 1 114 2.6E-50 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 Gene3D G3DSA:2.40.50.100 4 37 3.2E-4 T 23-04-2016 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 29.614 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 PIRSF PIRSF002191 1 114 7.9E-47 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 Pfam PF01245 Ribosomal protein L19 3 113 7.9E-48 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.9E-48 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 PRINTS PR00061 Ribosomal protein L19 signature 34 63 4.3E-39 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 PRINTS PR00061 Ribosomal protein L19 signature 88 113 4.3E-39 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 PRINTS PR00061 Ribosomal protein L19 signature 4 33 4.3E-39 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08370 9ecf9cdb9f8f94dd1fb95a5373a35a70 114 SUPERFAMILY SSF50104 2 113 5.72E-44 T 23-04-2016 IPR008991 Translation protein SH3-like domain CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 SUPERFAMILY SSF52540 199 448 1.21E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 PANTHER PTHR13710 1 596 3.6E-284 T 23-04-2016 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Gene3D G3DSA:1.10.150.80 526 596 1.1E-19 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Gene3D G3DSA:3.40.50.300 198 335 2.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 SMART SM00956 404 507 1.7E-52 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Gene3D G3DSA:3.40.50.300 3 192 8.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 SMART SM00490 242 323 7.8E-26 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 SUPERFAMILY SSF47819 520 596 6.32E-22 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Gene3D G3DSA:1.10.10.10 336 510 6.1E-60 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 SMART SM00341 523 603 1.5E-15 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 595 1.0E-249 T 23-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Pfam PF09382 RQC domain 399 511 2.4E-41 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 SMART SM00487 13 209 7.7E-31 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 PANTHER PTHR13710:SF81 1 596 3.6E-284 T 23-04-2016 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Pfam PF00570 HRDC domain 527 593 5.9E-20 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Pfam PF16124 RecQ zinc-binding 335 396 6.1E-17 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Pfam PF00271 Helicase conserved C-terminal domain 219 323 1.4E-14 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Pfam PF00270 DEAD/DEAH box helicase 20 178 7.9E-21 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 Pfam PF14493 Helix-turn-helix domain 609 701 2.2E-22 T 23-04-2016 IPR029491 Helicase Helix-turn-helix domain CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 SUPERFAMILY SSF52540 5 187 9.55E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01400 b8723eb0106ecc710ddd98a17c0b858c 704 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 456 4.2E-157 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 Pfam PF00591 Glycosyl transferase family, a/b domain 76 329 1.1E-95 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 PANTHER PTHR11922:SF5 20 31 1.2E-103 T 23-04-2016 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 PANTHER PTHR11922:SF5 68 337 1.2E-103 T 23-04-2016 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 Gene3D G3DSA:3.40.1030.10 76 340 6.1E-98 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 336 1.8E-121 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 338 37.849 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 PANTHER PTHR11922 20 31 1.2E-103 T 23-04-2016 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 PANTHER PTHR11922 68 337 1.2E-103 T 23-04-2016 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 SUPERFAMILY SSF47648 1 69 6.02E-19 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 64 1.1E-15 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 SUPERFAMILY SSF52418 75 342 1.57E-88 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CYCME_RS02095 75d1b2b6a2720a83114163bf0c5e414b 345 Gene3D G3DSA:1.20.970.10 7 70 5.8E-25 T 23-04-2016 CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 8.9E-18 T 23-04-2016 IPR003004 GspF/PilC family CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 8.9E-18 T 23-04-2016 IPR003004 GspF/PilC family CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 8.9E-18 T 23-04-2016 IPR003004 GspF/PilC family CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 8.9E-18 T 23-04-2016 IPR003004 GspF/PilC family CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 PANTHER PTHR30012 9 406 1.4E-154 T 23-04-2016 CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 Pfam PF00482 Type II secretion system (T2SS), protein F 277 398 1.4E-31 T 23-04-2016 IPR018076 Type II secretion system F domain CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 3.8E-29 T 23-04-2016 IPR018076 Type II secretion system F domain CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 23-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CYCME_RS11035 e917a9cc66eb9d912763dbe95af2e8ef 406 PANTHER PTHR30012:SF0 9 406 1.4E-154 T 23-04-2016 CYCME_RS03665 c89efa1c03f61074765b8fd317f91bc7 97 Pfam PF00276 Ribosomal protein L23 9 94 7.5E-31 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03665 c89efa1c03f61074765b8fd317f91bc7 97 SUPERFAMILY SSF54189 3 92 1.73E-30 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03665 c89efa1c03f61074765b8fd317f91bc7 97 PANTHER PTHR11620 12 92 7.9E-27 T 23-04-2016 CYCME_RS03665 c89efa1c03f61074765b8fd317f91bc7 97 Gene3D G3DSA:3.30.70.330 7 96 1.6E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CYCME_RS03665 c89efa1c03f61074765b8fd317f91bc7 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.322 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.3E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.3E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.3E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.3E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.3E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 1.4E-55 T 23-04-2016 CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PANTHER PTHR24321:SF6 3 258 6.8E-49 T 23-04-2016 CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 SUPERFAMILY SSF51735 1 258 3.81E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 6.4E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.4E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.4E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 Gene3D G3DSA:3.40.50.720 1 257 2.4E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01225 6a5080fd09d866604350659e5d908717 259 PANTHER PTHR24321 3 258 6.8E-49 T 23-04-2016 CYCME_RS03495 95a956a05d0a4f130f8bde6f6065a1de 487 SUPERFAMILY SSF75304 3 480 8.5E-163 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CYCME_RS03495 95a956a05d0a4f130f8bde6f6065a1de 487 PANTHER PTHR11895 1 480 1.6E-215 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CYCME_RS03495 95a956a05d0a4f130f8bde6f6065a1de 487 ProSitePatterns PS00571 Amidases signature. 149 180 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CYCME_RS03495 95a956a05d0a4f130f8bde6f6065a1de 487 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 91.776 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CYCME_RS03495 95a956a05d0a4f130f8bde6f6065a1de 487 PANTHER PTHR11895:SF7 1 480 1.6E-215 T 23-04-2016 CYCME_RS03495 95a956a05d0a4f130f8bde6f6065a1de 487 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 474 7.2E-182 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CYCME_RS03495 95a956a05d0a4f130f8bde6f6065a1de 487 Gene3D G3DSA:3.90.1300.10 3 479 2.2E-176 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CYCME_RS03495 95a956a05d0a4f130f8bde6f6065a1de 487 Pfam PF01425 Amidase 23 463 1.2E-153 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 8.6E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 Gene3D G3DSA:1.10.540.10 2 122 3.2E-34 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 Gene3D G3DSA:1.20.140.10 221 381 8.9E-56 T 23-04-2016 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 Gene3D G3DSA:2.40.110.10 124 220 2.0E-41 T 23-04-2016 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 SUPERFAMILY SSF56645 4 245 1.57E-83 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 119 1.6E-28 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 1.6E-25 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 PANTHER PTHR10909 2 381 1.5E-138 T 23-04-2016 CYCME_RS05880 3e9ecc79e85ad2e3db177594c05fa37c 382 SUPERFAMILY SSF47203 230 381 2.09E-44 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 Gene3D G3DSA:3.40.50.620 12 228 9.7E-83 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 3.1E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 212 224 3.1E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 3.1E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 179 201 3.1E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 SMART SM00363 338 398 8.4E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 SUPERFAMILY SSF52374 7 318 4.69E-92 T 23-04-2016 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 3 399 47.76 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 PANTHER PTHR11766:SF1 5 399 8.5E-215 T 23-04-2016 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 Pfam PF01479 S4 domain 340 384 1.5E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 Pfam PF00579 tRNA synthetases class I (W and Y) 33 319 4.7E-79 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 SUPERFAMILY SSF55174 322 399 7.72E-18 T 23-04-2016 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 11 399 1.3E-122 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 Gene3D G3DSA:1.10.240.10 229 327 6.7E-36 T 23-04-2016 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 Gene3D G3DSA:3.10.290.10 328 398 8.1E-23 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS11750 81f7e87c0206bc368dd1d5ca19d67e10 400 PANTHER PTHR11766 5 399 8.5E-215 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 CYCME_RS04155 e525d7f1b8e69bc08259fcc8f3fb252a 759 PANTHER PTHR30217:SF10 1 298 1.2E-110 T 23-04-2016 CYCME_RS04155 e525d7f1b8e69bc08259fcc8f3fb252a 759 PANTHER PTHR30217 1 298 1.2E-110 T 23-04-2016 CYCME_RS04155 e525d7f1b8e69bc08259fcc8f3fb252a 759 Pfam PF01136 Peptidase family U32 538 682 8.1E-6 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CYCME_RS04155 e525d7f1b8e69bc08259fcc8f3fb252a 759 Pfam PF01136 Peptidase family U32 77 292 2.7E-66 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 Pfam PF00364 Biotin-requiring enzyme 598 662 5.4E-16 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.1E-42 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 SUPERFAMILY SSF52440 1 113 3.31E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 Gene3D G3DSA:3.30.1490.20 130 202 8.2E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 2.8E-37 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 SUPERFAMILY SSF51246 331 448 1.57E-38 T 23-04-2016 IPR011054 Rudiment single hybrid motif CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 Gene3D G3DSA:3.30.470.20 204 448 2.0E-101 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 Gene3D G3DSA:3.40.50.20 1 129 2.6E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 SUPERFAMILY SSF51230 592 663 6.94E-19 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 620 637 - T 23-04-2016 IPR001882 Biotin-binding site CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 SMART SM00878 336 443 2.6E-52 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 SUPERFAMILY SSF56059 83 348 6.72E-62 T 23-04-2016 CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 Gene3D G3DSA:2.40.50.100 595 664 3.7E-21 T 23-04-2016 CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.9E-72 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS05850 863bbc6edb7095a38fb75418d8bfb8b1 667 PANTHER PTHR18866 1 666 0.0 T 23-04-2016 CYCME_RS04805 9c0872f557069c1a7f82b88f0eb6888a 412 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 9 142 2.5E-36 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CYCME_RS04805 9c0872f557069c1a7f82b88f0eb6888a 412 PANTHER PTHR12286 1 407 3.8E-163 T 23-04-2016 CYCME_RS04805 9c0872f557069c1a7f82b88f0eb6888a 412 SUPERFAMILY SSF51735 8 195 2.12E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04805 9c0872f557069c1a7f82b88f0eb6888a 412 Gene3D G3DSA:3.40.50.720 8 196 1.5E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04805 9c0872f557069c1a7f82b88f0eb6888a 412 PANTHER PTHR12286:SF6 1 407 3.8E-163 T 23-04-2016 CYCME_RS04805 9c0872f557069c1a7f82b88f0eb6888a 412 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 146 393 8.5E-32 T 23-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 Gene3D G3DSA:3.40.630.10 3 292 2.5E-69 T 23-04-2016 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 SMART SM00631 5 261 4.0E-48 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 56 78 - T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 PANTHER PTHR11705 3 262 8.1E-65 T 23-04-2016 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 SUPERFAMILY SSF53187 4 291 2.18E-67 T 23-04-2016 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 135 143 5.7E-7 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 56 70 5.7E-7 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 31 43 5.7E-7 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 Gene3D G3DSA:2.60.40.10 308 376 1.4E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 Pfam PF00246 Zinc carboxypeptidase 12 266 6.4E-52 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 SUPERFAMILY SSF49265 297 387 1.62E-6 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 CYCME_RS09545 9a4359de47b3486f303d9af2d35b5130 869 PANTHER PTHR11705:SF56 3 262 8.1E-65 T 23-04-2016 CYCME_RS00985 4c7defa7f995cadc03e2bba8b01fb509 344 PANTHER PTHR34184 1 344 7.9E-85 T 23-04-2016 CYCME_RS00985 4c7defa7f995cadc03e2bba8b01fb509 344 Pfam PF03773 Predicted permease 5 340 5.9E-57 T 23-04-2016 IPR005524 Predicted permease DUF318 CYCME_RS00985 4c7defa7f995cadc03e2bba8b01fb509 344 PANTHER PTHR34184:SF1 1 344 7.9E-85 T 23-04-2016 CYCME_RS00255 4c7defa7f995cadc03e2bba8b01fb509 344 PANTHER PTHR34184 1 344 7.9E-85 T 23-04-2016 CYCME_RS00255 4c7defa7f995cadc03e2bba8b01fb509 344 Pfam PF03773 Predicted permease 5 340 5.9E-57 T 23-04-2016 IPR005524 Predicted permease DUF318 CYCME_RS00255 4c7defa7f995cadc03e2bba8b01fb509 344 PANTHER PTHR34184:SF1 1 344 7.9E-85 T 23-04-2016 CYCME_RS09360 4c7defa7f995cadc03e2bba8b01fb509 344 PANTHER PTHR34184 1 344 7.9E-85 T 23-04-2016 CYCME_RS09360 4c7defa7f995cadc03e2bba8b01fb509 344 Pfam PF03773 Predicted permease 5 340 5.9E-57 T 23-04-2016 IPR005524 Predicted permease DUF318 CYCME_RS09360 4c7defa7f995cadc03e2bba8b01fb509 344 PANTHER PTHR34184:SF1 1 344 7.9E-85 T 23-04-2016 CYCME_RS03230 1cf1a62a46c60350eaf5ead5154390f4 247 Pfam PF12679 ABC-2 family transporter protein 66 242 2.5E-14 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CYCME_RS03230 1cf1a62a46c60350eaf5ead5154390f4 247 PANTHER PTHR30294:SF5 5 234 1.2E-16 T 23-04-2016 CYCME_RS03230 1cf1a62a46c60350eaf5ead5154390f4 247 PANTHER PTHR30294 5 234 1.2E-16 T 23-04-2016 CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PANTHER PTHR24322 155 187 1.9E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PANTHER PTHR24322 10 139 1.9E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 SUPERFAMILY SSF51735 4 259 5.8E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 259 2.5E-116 T 23-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 Gene3D G3DSA:3.40.50.720 2 259 3.9E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PANTHER PTHR24322:SF328 155 187 1.9E-55 T 23-04-2016 CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PANTHER PTHR24322:SF328 10 139 1.9E-55 T 23-04-2016 CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 258 4.7E-59 T 23-04-2016 CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.0E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.0E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 4.0E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.0E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.0E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.0E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08755 385175315f73948cc75860b88c4b68c7 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 22 37 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 122 140 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 189 207 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 83 102 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 57 72 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 163 181 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 37 52 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 105 122 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PRINTS PR01010 Flagellar P-ring protein signature 253 265 1.2E-78 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 Pfam PF02119 Flagellar P-ring protein 22 365 1.2E-138 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PANTHER PTHR30381 6 366 3.5E-192 T 23-04-2016 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 PANTHER PTHR30381:SF1 6 366 3.5E-192 T 23-04-2016 CYCME_RS05200 a8993e09fcf796d94cce23f609f115d5 366 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 366 39.134 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CYCME_RS03800 5b4c67378b98c9e48ffe7c52151f6b3d 238 Gene3D G3DSA:3.40.50.620 3 202 3.2E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS03800 5b4c67378b98c9e48ffe7c52151f6b3d 238 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 35 230 1.6E-76 T 23-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 CYCME_RS03800 5b4c67378b98c9e48ffe7c52151f6b3d 238 PANTHER PTHR23293 2 232 3.2E-93 T 23-04-2016 CYCME_RS03800 5b4c67378b98c9e48ffe7c52151f6b3d 238 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 206 3.7E-45 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 CYCME_RS03800 5b4c67378b98c9e48ffe7c52151f6b3d 238 PANTHER PTHR23293:SF11 2 232 3.2E-93 T 23-04-2016 CYCME_RS03800 5b4c67378b98c9e48ffe7c52151f6b3d 238 SUPERFAMILY SSF52402 1 194 1.34E-45 T 23-04-2016 CYCME_RS03800 5b4c67378b98c9e48ffe7c52151f6b3d 238 PIRSF PIRSF000857 1 236 2.2E-74 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 CYCME_RS07980 4e937ff027346520ad6c49d64936ae2f 356 Gene3D G3DSA:2.40.50.100 57 90 5.0E-14 T 23-04-2016 CYCME_RS07980 4e937ff027346520ad6c49d64936ae2f 356 Gene3D G3DSA:2.40.50.100 165 195 5.0E-14 T 23-04-2016 CYCME_RS07980 4e937ff027346520ad6c49d64936ae2f 356 SUPERFAMILY SSF111369 45 197 1.83E-19 T 23-04-2016 CYCME_RS07980 4e937ff027346520ad6c49d64936ae2f 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 269 2.5E-15 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CYCME_RS07980 4e937ff027346520ad6c49d64936ae2f 356 PANTHER PTHR30469 1 356 1.4E-60 T 23-04-2016 CYCME_RS07980 4e937ff027346520ad6c49d64936ae2f 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 352 1.0E-64 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS04795 9804e69e0292f6fe280064ea0d7a00b7 459 PANTHER PTHR30203 42 454 4.8E-48 T 23-04-2016 CYCME_RS04795 9804e69e0292f6fe280064ea0d7a00b7 459 SUPERFAMILY SSF56954 6 455 8.37E-75 T 23-04-2016 CYCME_RS04795 9804e69e0292f6fe280064ea0d7a00b7 459 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 454 1.4E-63 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CYCME_RS04795 9804e69e0292f6fe280064ea0d7a00b7 459 Pfam PF02321 Outer membrane efflux protein 69 245 3.5E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS04795 9804e69e0292f6fe280064ea0d7a00b7 459 Pfam PF02321 Outer membrane efflux protein 267 452 1.1E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS04795 9804e69e0292f6fe280064ea0d7a00b7 459 Gene3D G3DSA:1.20.1600.10 65 454 9.8E-75 T 23-04-2016 CYCME_RS10810 25cdfde5354f98d1a1c02ae820ed3f79 582 Gene3D G3DSA:3.30.70.100 431 497 1.2E-5 T 23-04-2016 CYCME_RS10810 25cdfde5354f98d1a1c02ae820ed3f79 582 Gene3D G3DSA:2.30.30.60 378 425 2.5E-15 T 23-04-2016 CYCME_RS10810 25cdfde5354f98d1a1c02ae820ed3f79 582 SUPERFAMILY SSF82861 275 360 4.32E-12 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CYCME_RS10810 25cdfde5354f98d1a1c02ae820ed3f79 582 Pfam PF00924 Mechanosensitive ion channel 319 520 4.0E-48 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CYCME_RS10810 25cdfde5354f98d1a1c02ae820ed3f79 582 PANTHER PTHR30566 240 579 3.4E-58 T 23-04-2016 CYCME_RS10810 25cdfde5354f98d1a1c02ae820ed3f79 582 SUPERFAMILY SSF82689 429 530 1.96E-13 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CYCME_RS10810 25cdfde5354f98d1a1c02ae820ed3f79 582 SUPERFAMILY SSF50182 361 426 1.8E-14 T 23-04-2016 IPR010920 LSM domain CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 Gene3D G3DSA:3.90.226.10 21 281 9.2E-71 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 PANTHER PTHR22855 1 280 1.3E-155 T 23-04-2016 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 2.3E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 2.3E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 2.3E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 2.3E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 2.3E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 SUPERFAMILY SSF52096 26 280 1.68E-81 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 282 37.273 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 Pfam PF01039 Carboxyl transferase domain 103 300 4.4E-15 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 PANTHER PTHR22855:SF17 1 280 1.3E-155 T 23-04-2016 CYCME_RS07340 61b8e9c96546037f9c7c68271d9b89d1 307 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 1.2E-126 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Gene3D G3DSA:1.10.730.10 599 786 1.5E-64 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PRINTS PR00986 Valyl-tRNA synthetase signature 443 464 1.3E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PRINTS PR00986 Valyl-tRNA synthetase signature 474 492 1.3E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PRINTS PR00986 Valyl-tRNA synthetase signature 227 244 1.3E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 1.3E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 1.3E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 919 16.323 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 856 917 1.5E-15 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PANTHER PTHR11946 576 830 0.0 T 23-04-2016 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PANTHER PTHR11946 1 538 0.0 T 23-04-2016 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PANTHER PTHR11946 850 917 0.0 T 23-04-2016 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 SUPERFAMILY SSF46589 854 918 3.3E-15 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Gene3D G3DSA:3.90.740.10 191 335 1.2E-47 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 SUPERFAMILY SSF50677 188 338 1.57E-63 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Pfam PF08264 Anticodon-binding domain of tRNA 642 795 2.2E-45 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 SUPERFAMILY SSF47323 610 868 8.41E-70 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Gene3D G3DSA:3.40.50.620 577 598 2.6E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Gene3D G3DSA:3.40.50.620 3 190 2.6E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Gene3D G3DSA:3.40.50.620 338 539 2.6E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 SUPERFAMILY SSF52374 1 189 1.08E-138 T 23-04-2016 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 SUPERFAMILY SSF52374 338 539 1.08E-138 T 23-04-2016 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 SUPERFAMILY SSF52374 577 609 1.08E-138 T 23-04-2016 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 900 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 599 3.5E-216 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 Gene3D G3DSA:1.10.287.380 848 901 4.6E-6 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PANTHER PTHR11946:SF5 576 830 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PANTHER PTHR11946:SF5 1 538 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS10955 f15a84e1714c39ee51018d2035a6bca4 921 PANTHER PTHR11946:SF5 850 917 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 PANTHER PTHR30033 1 642 4.1E-110 T 23-04-2016 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 SUPERFAMILY SSF64518 450 642 3.14E-20 T 23-04-2016 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 PRINTS PR01005 Flagellar hook-associated protein signature 361 383 2.1E-20 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 2.1E-20 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 2.1E-20 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 2.1E-20 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 2.1E-20 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 2.1E-20 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 Pfam PF00460 Flagella basal body rod protein 6 34 1.5E-6 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 337 1.2E-78 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 PANTHER PTHR30033:SF1 1 642 4.1E-110 T 23-04-2016 CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 583 638 2.2E-8 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CYCME_RS05210 b0ddc9ba5c889c27f3550cf782e6c02f 642 SUPERFAMILY SSF64518 156 446 1.01E-17 T 23-04-2016 CYCME_RS07015 022c9ba91d37af88ab74ce9f8cc09734 331 SUPERFAMILY SSF53448 5 235 2.92E-45 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07015 022c9ba91d37af88ab74ce9f8cc09734 331 Pfam PF00535 Glycosyl transferase family 2 11 167 8.9E-24 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS07015 022c9ba91d37af88ab74ce9f8cc09734 331 Gene3D G3DSA:3.90.550.10 8 210 6.9E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07015 022c9ba91d37af88ab74ce9f8cc09734 331 PANTHER PTHR22916 1 285 3.8E-33 T 23-04-2016 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 PRINTS PR00987 Glutamyl-tRNA synthetase signature 213 223 5.59E-7 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 PRINTS PR00987 Glutamyl-tRNA synthetase signature 63 76 5.59E-7 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 45 5.59E-7 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 PANTHER PTHR11451:SF29 270 559 8.5E-215 T 23-04-2016 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 PANTHER PTHR11451:SF29 1 250 8.5E-215 T 23-04-2016 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Gene3D G3DSA:1.10.1160.10 266 341 1.3E-36 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 555 51.997 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Gene3D G3DSA:2.40.240.10 466 553 6.9E-28 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 343 534 5.6E-57 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Gene3D G3DSA:2.40.240.10 351 465 3.7E-49 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 SUPERFAMILY SSF52374 13 339 7.11E-100 T 23-04-2016 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 30 557 4.4E-240 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 SUPERFAMILY SSF50715 343 554 2.72E-69 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 47 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 PANTHER PTHR11451 270 559 8.5E-215 T 23-04-2016 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 PANTHER PTHR11451 1 250 8.5E-215 T 23-04-2016 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Gene3D G3DSA:3.90.800.10 104 212 4.0E-44 T 23-04-2016 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 29 339 6.2E-108 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Gene3D G3DSA:3.40.50.620 29 99 6.5E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS08895 a153eb8b030acc462dd40008d0a8dc1f 559 Gene3D G3DSA:3.40.50.620 215 265 6.5E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS04675 4ed37154050f855559f8e039ec97839f 258 PANTHER PTHR30283:SF3 2 258 3.2E-108 T 23-04-2016 CYCME_RS04675 4ed37154050f855559f8e039ec97839f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 36.781 T 23-04-2016 IPR005583 Peroxide stress protein YaaA CYCME_RS04675 4ed37154050f855559f8e039ec97839f 258 Pfam PF03883 Protein of unknown function (DUF328) 1 243 9.0E-93 T 23-04-2016 IPR005583 Peroxide stress protein YaaA CYCME_RS04675 4ed37154050f855559f8e039ec97839f 258 PANTHER PTHR30283 2 258 3.2E-108 T 23-04-2016 CYCME_RS11045 ee1f0b4a33e3f4fc089162d34cb9e627 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 195 26.164 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CYCME_RS11045 ee1f0b4a33e3f4fc089162d34cb9e627 201 Gene3D G3DSA:3.40.50.300 1 194 1.5E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11045 ee1f0b4a33e3f4fc089162d34cb9e627 201 PANTHER PTHR10695 1 194 8.0E-64 T 23-04-2016 CYCME_RS11045 ee1f0b4a33e3f4fc089162d34cb9e627 201 Pfam PF01121 Dephospho-CoA kinase 3 178 2.1E-58 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CYCME_RS11045 ee1f0b4a33e3f4fc089162d34cb9e627 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 4.3E-53 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CYCME_RS11045 ee1f0b4a33e3f4fc089162d34cb9e627 201 SUPERFAMILY SSF52540 1 190 1.05E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04440 d290bc5303b8abd31c55f5a5b898d0bd 138 Gene3D G3DSA:3.40.50.300 3 136 3.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04440 d290bc5303b8abd31c55f5a5b898d0bd 138 SUPERFAMILY SSF52540 14 126 9.11E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04440 d290bc5303b8abd31c55f5a5b898d0bd 138 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 4 123 1.2E-37 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CYCME_RS04440 d290bc5303b8abd31c55f5a5b898d0bd 138 PANTHER PTHR33540:SF2 1 129 1.4E-40 T 23-04-2016 CYCME_RS04440 d290bc5303b8abd31c55f5a5b898d0bd 138 PANTHER PTHR33540 1 129 1.4E-40 T 23-04-2016 CYCME_RS04440 d290bc5303b8abd31c55f5a5b898d0bd 138 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 3 131 6.0E-48 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 7.7E-26 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 9.2E-32 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 Gene3D G3DSA:3.40.50.720 285 388 1.8E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 SUPERFAMILY SSF52413 283 387 1.96E-27 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 SMART SM00984 300 387 3.3E-12 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 PIRSF PIRSF000124 1 388 8.7E-131 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 368 1.3E-7 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 Gene3D G3DSA:3.40.50.720 1 197 1.9E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 Gene3D G3DSA:1.10.1040.10 198 284 5.8E-34 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 SUPERFAMILY SSF48179 191 287 1.87E-29 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 376 4.1E-100 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 PIRSF PIRSF500134 1 343 2.6E-113 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 SUPERFAMILY SSF51735 1 194 3.32E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 PANTHER PTHR11374:SF17 1 364 5.0E-208 T 23-04-2016 CYCME_RS11020 fad9bc7e97791620e6c8077ec8a94b59 388 PANTHER PTHR11374 1 364 5.0E-208 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 Pfam PF00355 Rieske [2Fe-2S] domain 40 122 7.7E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 186 430 1.3E-19 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 SUPERFAMILY SSF55961 155 437 5.73E-54 T 23-04-2016 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 PANTHER PTHR21266:SF30 19 220 1.9E-63 T 23-04-2016 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 PANTHER PTHR21266 19 220 1.9E-63 T 23-04-2016 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 54 69 4.3E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 180 202 4.3E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 139 165 4.3E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 96 116 4.3E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 4.3E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 75 95 4.3E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 Gene3D G3DSA:3.90.380.10 139 435 1.3E-80 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 SUPERFAMILY SSF50022 5 154 5.37E-45 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01235 2f8a8fc99ee7264ca0fa1caacdca3ee4 451 Gene3D G3DSA:2.102.10.10 27 138 2.8E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 PANTHER PTHR22777 17 283 2.4E-98 T 23-04-2016 CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 SMART SM00116 73 122 3.5 T 23-04-2016 IPR000644 CBS domain CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 SMART SM00116 137 185 1.6 T 23-04-2016 IPR000644 CBS domain CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 SUPERFAMILY SSF56176 196 277 1.58E-19 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 Pfam PF03471 Transporter associated domain 203 276 4.8E-18 T 23-04-2016 IPR005170 Transporter-associated domain CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 Gene3D G3DSA:3.10.580.10 52 192 7.4E-26 T 23-04-2016 CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 Pfam PF00571 CBS domain 131 185 8.9E-6 T 23-04-2016 IPR000644 CBS domain CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 Pfam PF00571 CBS domain 64 121 7.7E-5 T 23-04-2016 IPR000644 CBS domain CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 Gene3D G3DSA:3.30.465.10 193 278 1.1E-24 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 PANTHER PTHR22777:SF17 17 283 2.4E-98 T 23-04-2016 CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 SMART SM01091 201 278 7.1E-23 T 23-04-2016 IPR005170 Transporter-associated domain CYCME_RS03885 838afa67dfd5b20d92956acfe7b7e76c 283 SUPERFAMILY SSF54631 60 201 2.27E-34 T 23-04-2016 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 SUPERFAMILY SSF53901 3 263 1.77E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 Gene3D G3DSA:3.40.47.10 146 189 1.1E-51 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 Gene3D G3DSA:3.40.47.10 274 389 1.1E-51 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 PIRSF PIRSF000429 1 390 6.1E-106 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 Pfam PF02803 Thiolase, C-terminal domain 268 389 7.6E-39 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 SUPERFAMILY SSF53901 268 389 1.11E-37 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 Gene3D G3DSA:3.40.47.10 190 273 4.7E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 Gene3D G3DSA:3.40.47.10 3 124 4.7E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 3.5E-119 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 PANTHER PTHR18919 1 390 3.4E-158 T 23-04-2016 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 PANTHER PTHR18919:SF71 1 390 3.4E-158 T 23-04-2016 CYCME_RS05980 d940ccb11a32ac72b93368b5ffd42e4a 390 Pfam PF00108 Thiolase, N-terminal domain 5 259 1.7E-69 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CYCME_RS08415 f7722e26b41511db4e596ae1044950ff 332 PANTHER PTHR30160 9 331 4.4E-84 T 23-04-2016 CYCME_RS08415 f7722e26b41511db4e596ae1044950ff 332 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 324 5.3E-109 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CYCME_RS08415 f7722e26b41511db4e596ae1044950ff 332 SUPERFAMILY SSF52540 53 201 7.97E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08415 f7722e26b41511db4e596ae1044950ff 332 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 318 3.0E-82 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CYCME_RS08415 f7722e26b41511db4e596ae1044950ff 332 PANTHER PTHR30160:SF13 9 331 4.4E-84 T 23-04-2016 CYCME_RS08415 f7722e26b41511db4e596ae1044950ff 332 Gene3D G3DSA:3.40.50.300 53 118 9.5E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08415 f7722e26b41511db4e596ae1044950ff 332 Gene3D G3DSA:3.40.50.300 194 212 9.5E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08415 f7722e26b41511db4e596ae1044950ff 332 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 331 38.432 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CYCME_RS02150 bd69a5230a805edca4f6b266be3e4f0a 197 PANTHER PTHR11055 1 197 1.2E-131 T 23-04-2016 CYCME_RS02150 bd69a5230a805edca4f6b266be3e4f0a 197 Pfam PF01583 Adenylylsulphate kinase 24 175 6.8E-74 T 23-04-2016 CYCME_RS02150 bd69a5230a805edca4f6b266be3e4f0a 197 Gene3D G3DSA:3.40.50.300 1 197 1.2E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02150 bd69a5230a805edca4f6b266be3e4f0a 197 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 195 38.308 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 CYCME_RS02150 bd69a5230a805edca4f6b266be3e4f0a 197 SUPERFAMILY SSF52540 20 193 1.69E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02150 bd69a5230a805edca4f6b266be3e4f0a 197 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 190 4.2E-82 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 Pfam PF00009 Elongation factor Tu GTP binding domain 12 276 2.2E-51 T 23-04-2016 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 SUPERFAMILY SSF52540 9 276 2.39E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 SUPERFAMILY SSF54980 391 465 7.55E-16 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 Pfam PF03144 Elongation factor Tu domain 2 313 379 8.7E-8 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 513 2.8E-44 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 150 3.7E-20 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 SUPERFAMILY SSF50447 260 387 9.28E-28 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 Gene3D G3DSA:2.40.30.10 291 387 4.7E-23 T 23-04-2016 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 Gene3D G3DSA:3.40.50.300 9 282 5.0E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PRINTS PR00315 GTP-binding elongation factor signature 101 112 3.3E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 Gene3D G3DSA:3.30.70.870 394 462 1.4E-11 T 23-04-2016 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 526 52.193 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PANTHER PTHR23115 250 471 1.4E-233 T 23-04-2016 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PANTHER PTHR23115 1 184 1.4E-233 T 23-04-2016 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 527 2.5E-254 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PANTHER PTHR23115:SF69 250 471 1.4E-233 T 23-04-2016 CYCME_RS11945 dc1cb61fb34169edfd92ce839050de19 528 PANTHER PTHR23115:SF69 1 184 1.4E-233 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 411 437 9.3E-10 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SUPERFAMILY SSF47781 407 586 8.9E-59 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 PANTHER PTHR23389 1 534 3.8E-198 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SUPERFAMILY SSF56091 5 319 8.64E-119 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Pfam PF14520 Helix-hairpin-helix domain 449 505 1.4E-6 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SUPERFAMILY SSF52113 594 672 1.59E-20 T 23-04-2016 IPR001357 BRCT domain CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 PANTHER PTHR23389:SF9 1 534 3.8E-198 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SMART SM00532 6 451 1.6E-255 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Gene3D G3DSA:3.30.470.30 122 255 5.2E-49 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Hamap MF_01588 DNA ligase [ligA]. 5 670 53.68 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 325 400 3.1E-33 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Gene3D G3DSA:1.10.287.610 4 70 3.4E-27 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 321 4.1E-128 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Gene3D G3DSA:2.40.50.140 322 394 2.7E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 118 147 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 334 349 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SUPERFAMILY SSF50249 321 402 9.59E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SMART SM00292 596 673 3.0E-15 T 23-04-2016 IPR001357 BRCT domain CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Gene3D G3DSA:1.10.150.20 438 506 1.1E-30 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 PIRSF PIRSF001604 1 673 1.2E-246 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 599 670 8.1E-14 T 23-04-2016 IPR001357 BRCT domain CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Pfam PF12826 Helix-hairpin-helix motif 513 576 1.2E-21 T 23-04-2016 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Gene3D G3DSA:3.40.50.10190 595 672 4.5E-25 T 23-04-2016 IPR001357 BRCT domain CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SMART SM00278 547 566 0.71 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SMART SM00278 515 534 2000.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SMART SM00278 449 468 140.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 SMART SM00278 483 502 110.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 666 1.5E-257 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CYCME_RS09305 5caacf275e27794123849bdace6416cd 673 Gene3D G3DSA:1.10.150.20 508 587 1.6E-28 T 23-04-2016 CYCME_RS10135 80c068ca863eb0123944d9caf0e78f71 308 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS10135 80c068ca863eb0123944d9caf0e78f71 308 PANTHER PTHR24220 5 299 1.4E-153 T 23-04-2016 CYCME_RS10135 80c068ca863eb0123944d9caf0e78f71 308 PANTHER PTHR24220:SF305 5 299 1.4E-153 T 23-04-2016 CYCME_RS10135 80c068ca863eb0123944d9caf0e78f71 308 Pfam PF00005 ABC transporter 21 164 3.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS10135 80c068ca863eb0123944d9caf0e78f71 308 Gene3D G3DSA:3.40.50.300 2 229 2.4E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10135 80c068ca863eb0123944d9caf0e78f71 308 SMART SM00382 29 211 9.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS10135 80c068ca863eb0123944d9caf0e78f71 308 SUPERFAMILY SSF52540 3 230 3.34E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 PANTHER PTHR11451 2 638 0.0 T 23-04-2016 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 2.5E-16 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 SUPERFAMILY SSF81271 3 61 1.96E-14 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 5.0E-226 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.956 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 1.6E-45 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 5.6E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 5.6E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 5.6E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 5.6E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 5.6E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Gene3D G3DSA:3.40.50.800 530 634 1.0E-33 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Gene3D G3DSA:3.30.980.10 187 222 2.5E-42 T 23-04-2016 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Gene3D G3DSA:3.30.980.10 66 129 2.5E-42 T 23-04-2016 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 SMART SM00863 169 218 2.1E-25 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Gene3D G3DSA:3.30.930.10 241 529 1.8E-121 T 23-04-2016 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Gene3D G3DSA:3.10.20.30 4 64 6.5E-20 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Pfam PF02824 TGS domain 4 61 9.3E-10 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 SUPERFAMILY SSF55681 242 525 3.83E-99 T 23-04-2016 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 SUPERFAMILY SSF52954 528 631 1.25E-30 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Gene3D G3DSA:3.30.54.20 132 186 6.6E-23 T 23-04-2016 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 Pfam PF03129 Anticodon binding domain 540 629 3.7E-21 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 SUPERFAMILY SSF55186 64 240 1.09E-66 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CYCME_RS08825 3d7ab99e6f09d5db9fcbaeb260a55b93 639 PANTHER PTHR11451:SF31 2 638 0.0 T 23-04-2016 CYCME_RS07925 37c255db0946d88b47033cca823144e0 410 Pfam PF07044 Protein of unknown function (DUF1329) 35 385 1.4E-45 T 23-04-2016 IPR010752 Protein of unknown function DUF1329 CYCME_RS07925 37c255db0946d88b47033cca823144e0 410 Gene3D G3DSA:2.50.20.10 172 274 3.8E-31 T 23-04-2016 CYCME_RS07925 37c255db0946d88b47033cca823144e0 410 Gene3D G3DSA:2.50.20.10 306 392 3.8E-31 T 23-04-2016 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PANTHER PTHR11739 10 375 3.5E-159 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PIRSF PIRSF001369 2 375 1.6E-117 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 ProSitePatterns PS00480 Citrate synthase signature. 257 269 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 Gene3D G3DSA:1.10.580.10 16 236 5.4E-77 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PANTHER PTHR11739:SF4 10 375 3.5E-159 T 23-04-2016 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 Pfam PF00285 Citrate synthase, C-terminal domain 10 356 1.0E-116 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 Gene3D G3DSA:1.10.230.10 237 321 1.2E-30 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PRINTS PR00143 Citrate synthase signature 327 341 6.7E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PRINTS PR00143 Citrate synthase signature 307 323 6.7E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PRINTS PR00143 Citrate synthase signature 125 138 6.7E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PRINTS PR00143 Citrate synthase signature 250 270 6.7E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PRINTS PR00143 Citrate synthase signature 197 225 6.7E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 PRINTS PR00143 Citrate synthase signature 175 190 6.7E-36 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 SUPERFAMILY SSF48256 9 374 2.09E-127 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS11710 bc86a59059e760a91dcf7b20cc431546 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 10 374 1.0E-157 T 23-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 1.0E-93 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 162 1.8E-27 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 Gene3D G3DSA:3.30.300.20 193 291 2.6E-37 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 PANTHER PTHR11649 7 300 3.8E-106 T 23-04-2016 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 Gene3D G3DSA:3.40.50.300 8 192 2.8E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 PANTHER PTHR11649:SF3 7 300 3.8E-106 T 23-04-2016 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 Hamap MF_00367 GTPase Era [era]. 6 296 35.063 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 Pfam PF01926 50S ribosome-binding GTPase 11 125 9.2E-21 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 5.9E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 60 75 5.9E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 SUPERFAMILY SSF52540 11 212 2.15E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 Pfam PF07650 KH domain 209 284 1.2E-18 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 CYCME_RS07375 72cc530d7ca497a52388f45fd1bedb56 300 SUPERFAMILY SSF54814 182 297 1.57E-39 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CYCME_RS04730 6cb6a4750082c8263e7046bfff978115 180 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 16 172 1.3E-45 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CYCME_RS04730 6cb6a4750082c8263e7046bfff978115 180 Gene3D G3DSA:3.40.50.300 13 175 2.9E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04730 6cb6a4750082c8263e7046bfff978115 180 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 16 148 3.8E-49 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CYCME_RS04730 6cb6a4750082c8263e7046bfff978115 180 PANTHER PTHR40072 15 173 1.0E-19 T 23-04-2016 CYCME_RS04730 6cb6a4750082c8263e7046bfff978115 180 SUPERFAMILY SSF52540 15 175 3.56E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10210 17c269f988e7179a83e08ecfe478caa4 63 PANTHER PTHR35530 1 58 1.6E-15 T 23-04-2016 CYCME_RS10210 17c269f988e7179a83e08ecfe478caa4 63 SUPERFAMILY SSF55331 2 60 4.19E-18 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily CYCME_RS10210 17c269f988e7179a83e08ecfe478caa4 63 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 6.1E-23 T 23-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 CYCME_RS10210 17c269f988e7179a83e08ecfe478caa4 63 Pfam PF01361 Tautomerase enzyme 2 57 2.9E-19 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CYCME_RS10210 17c269f988e7179a83e08ecfe478caa4 63 Gene3D G3DSA:3.30.429.20 1 58 1.5E-25 T 23-04-2016 CYCME_RS11905 62786083ba6a598e9c776b9f26c81a43 301 Pfam PF01758 Sodium Bile acid symporter family 36 209 2.0E-39 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS11905 62786083ba6a598e9c776b9f26c81a43 301 PANTHER PTHR10361 1 301 9.5E-90 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS09760 66dc9746e520494a332e8980aaa253ed 246 SUPERFAMILY SSF52540 29 245 3.59E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09760 66dc9746e520494a332e8980aaa253ed 246 Pfam PF00005 ABC transporter 49 195 9.9E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS09760 66dc9746e520494a332e8980aaa253ed 246 PANTHER PTHR24220 31 246 1.4E-101 T 23-04-2016 CYCME_RS09760 66dc9746e520494a332e8980aaa253ed 246 PANTHER PTHR24220:SF509 31 246 1.4E-101 T 23-04-2016 CYCME_RS09760 66dc9746e520494a332e8980aaa253ed 246 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS09760 66dc9746e520494a332e8980aaa253ed 246 Gene3D G3DSA:3.40.50.300 27 246 1.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09760 66dc9746e520494a332e8980aaa253ed 246 SMART SM00382 58 244 3.1E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00065 63d4fa3553677962db8e5e82bdd0bcda 105 Pfam PF00699 Urease beta subunit 3 99 2.1E-45 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00065 63d4fa3553677962db8e5e82bdd0bcda 105 PANTHER PTHR33569 1 102 3.1E-62 T 23-04-2016 CYCME_RS00065 63d4fa3553677962db8e5e82bdd0bcda 105 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 1.5E-46 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00065 63d4fa3553677962db8e5e82bdd0bcda 105 Gene3D G3DSA:2.10.150.10 1 103 1.2E-51 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00065 63d4fa3553677962db8e5e82bdd0bcda 105 SUPERFAMILY SSF51278 1 103 1.14E-48 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00065 63d4fa3553677962db8e5e82bdd0bcda 105 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.979 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00065 63d4fa3553677962db8e5e82bdd0bcda 105 PANTHER PTHR33569:SF1 1 102 3.1E-62 T 23-04-2016 CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 SMART SM00382 28 235 1.2E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 SUPERFAMILY SSF52540 4 236 4.67E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 PANTHER PTHR24220:SF497 5 238 1.9E-135 T 23-04-2016 CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 Pfam PF00005 ABC transporter 19 166 3.3E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.4E-115 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 PANTHER PTHR24220 5 238 1.9E-135 T 23-04-2016 CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 8.2E-5 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CYCME_RS04000 51d84084aa1e568816b438b72b87d89c 241 Gene3D G3DSA:3.40.50.300 4 231 8.4E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 8 317 5.0E-133 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 6 335 62.17 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 PANTHER PTHR11735:SF6 7 335 4.1E-155 T 23-04-2016 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 PANTHER PTHR11735 7 335 4.1E-155 T 23-04-2016 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 1.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 9 22 1.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 1.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 1.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 1.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 9 310 7.8E-120 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 Gene3D G3DSA:3.30.420.40 7 163 6.9E-45 T 23-04-2016 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 Pfam PF00814 Glycoprotease family 28 311 1.6E-101 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 23-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 SUPERFAMILY SSF53067 8 126 2.72E-29 T 23-04-2016 CYCME_RS00495 075807dd7bf8958c65409dacfacdb3da 344 SUPERFAMILY SSF53067 105 313 7.77E-46 T 23-04-2016 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 456 465 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 SUPERFAMILY SSF56762 13 465 7.98E-119 T 23-04-2016 IPR029014 NiFe hydrogenase-like CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 Gene3D G3DSA:1.10.645.10 13 465 2.2E-109 T 23-04-2016 IPR029014 NiFe hydrogenase-like CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 PANTHER PTHR11993 15 130 1.6E-147 T 23-04-2016 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 PANTHER PTHR11993 149 217 1.6E-147 T 23-04-2016 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 PANTHER PTHR11993 273 472 1.6E-147 T 23-04-2016 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 52 77 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 PANTHER PTHR11993:SF9 15 130 1.6E-147 T 23-04-2016 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 PANTHER PTHR11993:SF9 149 217 1.6E-147 T 23-04-2016 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 PANTHER PTHR11993:SF9 273 472 1.6E-147 T 23-04-2016 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 Pfam PF00374 Nickel-dependent hydrogenase 52 129 5.7E-15 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CYCME_RS08705 9d632ba195615e08beee731c18a95bdc 497 Pfam PF00374 Nickel-dependent hydrogenase 271 465 7.8E-15 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 SUPERFAMILY SSF51230 3 89 4.19E-20 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 456 561 1.5E-32 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 424 4.2E-40 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 373 389 4.2E-40 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 304 4.2E-40 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 265 4.2E-40 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 118 137 4.2E-40 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PIRSF PIRSF000350 31 576 2.5E-89 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 Gene3D G3DSA:2.40.50.100 6 82 1.8E-19 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 Gene3D G3DSA:3.50.50.60 251 443 3.8E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 Pfam PF00364 Biotin-requiring enzyme 6 78 2.4E-19 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 Gene3D G3DSA:3.30.390.30 444 567 8.2E-43 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PANTHER PTHR22912:SF160 102 568 7.1E-236 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 SUPERFAMILY SSF55424 452 575 1.32E-37 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 452 473 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 311 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 539 559 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 424 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 374 388 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 517 532 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 165 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 250 259 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 117 139 1.0E-70 T 23-04-2016 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 117 437 2.2E-65 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 116 568 6.2E-155 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 SUPERFAMILY SSF51905 108 446 1.3E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 Gene3D G3DSA:3.50.50.60 115 250 2.9E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 151 161 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CYCME_RS02615 ca077ec26218f644e74405b0826b04a0 580 PANTHER PTHR22912 102 568 7.1E-236 T 23-04-2016 CYCME_RS00170 b05eb41a8e5dce94b1351bf4318b1f1a 141 PANTHER PTHR12231:SF138 1 141 3.1E-24 T 23-04-2016 CYCME_RS00170 b05eb41a8e5dce94b1351bf4318b1f1a 141 SMART SM00450 40 137 4.2E-21 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS00170 b05eb41a8e5dce94b1351bf4318b1f1a 141 PANTHER PTHR12231 1 141 3.1E-24 T 23-04-2016 CYCME_RS00170 b05eb41a8e5dce94b1351bf4318b1f1a 141 Pfam PF00581 Rhodanese-like domain 41 133 5.9E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS00170 b05eb41a8e5dce94b1351bf4318b1f1a 141 Gene3D G3DSA:3.40.250.10 21 140 6.0E-33 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS00170 b05eb41a8e5dce94b1351bf4318b1f1a 141 SUPERFAMILY SSF52821 18 140 1.2E-33 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10510 53e6659d8d7f582cca417e31ccc987cb 91 SMART SM00530 18 73 4.1E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CYCME_RS10510 53e6659d8d7f582cca417e31ccc987cb 91 Gene3D G3DSA:1.10.260.40 13 72 3.7E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CYCME_RS10510 53e6659d8d7f582cca417e31ccc987cb 91 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 14 70 1.0E-23 T 23-04-2016 IPR017507 Transcription regulator, HipB-like CYCME_RS10510 53e6659d8d7f582cca417e31ccc987cb 91 SUPERFAMILY SSF47413 12 78 2.68E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CYCME_RS10510 53e6659d8d7f582cca417e31ccc987cb 91 Pfam PF13560 Helix-turn-helix domain 14 69 6.0E-10 T 23-04-2016 CYCME_RS01210 d2c5a4b29ea469a24ce4b3c557f4f2f7 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 205 25.649 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CYCME_RS01210 d2c5a4b29ea469a24ce4b3c557f4f2f7 208 SUPERFAMILY SSF52218 1 206 1.74E-41 T 23-04-2016 IPR029039 Flavoprotein-like domain CYCME_RS01210 d2c5a4b29ea469a24ce4b3c557f4f2f7 208 PANTHER PTHR10204 1 207 2.2E-51 T 23-04-2016 CYCME_RS01210 d2c5a4b29ea469a24ce4b3c557f4f2f7 208 PANTHER PTHR10204:SF4 1 207 2.2E-51 T 23-04-2016 CYCME_RS01210 d2c5a4b29ea469a24ce4b3c557f4f2f7 208 Gene3D G3DSA:3.40.50.360 1 205 9.6E-54 T 23-04-2016 IPR029039 Flavoprotein-like domain CYCME_RS01210 d2c5a4b29ea469a24ce4b3c557f4f2f7 208 Pfam PF02525 Flavodoxin-like fold 3 202 8.2E-39 T 23-04-2016 IPR003680 Flavodoxin-like fold CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 SUPERFAMILY SSF53850 90 294 8.96E-37 T 23-04-2016 CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 Gene3D G3DSA:3.40.190.10 90 182 3.2E-17 T 23-04-2016 CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.9E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 PANTHER PTHR30126:SF25 3 292 2.0E-113 T 23-04-2016 CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 Gene3D G3DSA:3.40.190.10 183 253 9.8E-14 T 23-04-2016 CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 Gene3D G3DSA:1.10.10.10 4 89 5.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 Pfam PF03466 LysR substrate binding domain 89 292 2.6E-35 T 23-04-2016 IPR005119 LysR, substrate-binding CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 SUPERFAMILY SSF46785 2 113 1.47E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08200 15e812726371ec9f7866ef0eb507e9a4 298 PANTHER PTHR30126 3 292 2.0E-113 T 23-04-2016 CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 Gene3D G3DSA:3.40.50.300 357 588 7.3E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 PANTHER PTHR24221 20 597 4.3E-229 T 23-04-2016 CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 SUPERFAMILY SSF52540 351 595 3.0E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 Pfam PF00664 ABC transporter transmembrane region 36 309 3.8E-44 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 Gene3D G3DSA:1.20.1560.10 22 346 9.1E-71 T 23-04-2016 CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 SUPERFAMILY SSF90123 16 342 2.62E-69 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 SMART SM00382 384 570 6.2E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS08865 8006ca9ac9bd290bbdca3c7bf78b8691 597 Pfam PF00005 ABC transporter 375 524 2.2E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS10265 da034b05936c91d8d1a7fa3dae3e9e95 92 Pfam PF02406 MmoB/DmpM family 6 89 1.6E-31 T 23-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CYCME_RS10265 da034b05936c91d8d1a7fa3dae3e9e95 92 Gene3D G3DSA:3.90.56.10 4 91 4.0E-33 T 23-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CYCME_RS10265 da034b05936c91d8d1a7fa3dae3e9e95 92 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 12 91 4.0E-24 T 23-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CYCME_RS10265 da034b05936c91d8d1a7fa3dae3e9e95 92 SUPERFAMILY SSF56029 3 92 9.42E-31 T 23-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CYCME_RS09665 7d8a466a5b2f211c7f54daf4639ebc52 448 Pfam PF02601 Exonuclease VII, large subunit 125 438 7.3E-102 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CYCME_RS09665 7d8a466a5b2f211c7f54daf4639ebc52 448 PANTHER PTHR30008 1 447 7.6E-165 T 23-04-2016 CYCME_RS09665 7d8a466a5b2f211c7f54daf4639ebc52 448 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 5 442 29.171 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CYCME_RS09665 7d8a466a5b2f211c7f54daf4639ebc52 448 Pfam PF13742 OB-fold nucleic acid binding domain 8 101 4.2E-28 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CYCME_RS09665 7d8a466a5b2f211c7f54daf4639ebc52 448 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 9 352 2.4E-132 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CYCME_RS09665 7d8a466a5b2f211c7f54daf4639ebc52 448 PANTHER PTHR30008:SF0 1 447 7.6E-165 T 23-04-2016 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 Pfam PF02080 TrkA-C domain 309 371 5.1E-7 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 SUPERFAMILY SSF116726 298 374 1.96E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 7.0E-79 T 23-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 Gene3D G3DSA:3.30.470.20 172 277 1.2E-35 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 SUPERFAMILY SSF56059 89 287 7.78E-49 T 23-04-2016 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 Gene3D G3DSA:3.30.70.1450 310 372 1.1E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 PANTHER PTHR21621:SF0 1 312 1.3E-115 T 23-04-2016 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 Gene3D G3DSA:3.30.1490.20 112 171 1.3E-7 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 PANTHER PTHR21621 1 312 1.3E-115 T 23-04-2016 CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 Gene3D G3DSA:3.40.50.20 8 111 3.9E-16 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS09470 ccd2a360b42a096717e4f1c8b0d887d5 405 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.2E-58 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type CYCME_RS05290 33d547c77a9e57ad3ad5a87dd970c5ae 367 SUPERFAMILY SSF52540 61 200 3.7E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05290 33d547c77a9e57ad3ad5a87dd970c5ae 367 Gene3D G3DSA:3.40.50.300 15 174 4.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05290 33d547c77a9e57ad3ad5a87dd970c5ae 367 PANTHER PTHR12169 1 367 3.5E-163 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 CYCME_RS05290 33d547c77a9e57ad3ad5a87dd970c5ae 367 PANTHER PTHR12169:SF11 1 367 3.5E-163 T 23-04-2016 CYCME_RS05290 33d547c77a9e57ad3ad5a87dd970c5ae 367 Pfam PF03969 AFG1-like ATPase 1 363 1.7E-138 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 CYCME_RS05290 33d547c77a9e57ad3ad5a87dd970c5ae 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 52.583 T 23-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CYCME_RS05855 55895d09c0b57cbb602c1aadb48059e0 535 Gene3D G3DSA:3.90.226.10 28 271 3.7E-78 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05855 55895d09c0b57cbb602c1aadb48059e0 535 Gene3D G3DSA:3.90.226.10 276 528 3.9E-90 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05855 55895d09c0b57cbb602c1aadb48059e0 535 Pfam PF01039 Carboxyl transferase domain 48 526 2.9E-148 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS05855 55895d09c0b57cbb602c1aadb48059e0 535 PANTHER PTHR22855:SF35 4 535 0.0 T 23-04-2016 CYCME_RS05855 55895d09c0b57cbb602c1aadb48059e0 535 PANTHER PTHR22855 4 535 0.0 T 23-04-2016 CYCME_RS05855 55895d09c0b57cbb602c1aadb48059e0 535 SUPERFAMILY SSF52096 237 517 6.36E-85 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05855 55895d09c0b57cbb602c1aadb48059e0 535 SUPERFAMILY SSF52096 23 268 2.34E-71 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 Pfam PF00512 His Kinase A (phospho-acceptor) domain 325 389 1.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 SMART SM00388 325 391 4.8E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 SUPERFAMILY SSF55874 382 540 3.93E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 Gene3D G3DSA:1.10.287.130 319 387 4.7E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 PANTHER PTHR24423 210 541 2.3E-75 T 23-04-2016 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 SUPERFAMILY SSF47384 318 391 1.26E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 PANTHER PTHR24423:SF483 210 541 2.3E-75 T 23-04-2016 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 503 2.8E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 489 2.8E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 541 2.8E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 522 2.8E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 434 540 1.8E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 SMART SM00387 433 543 1.9E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS11545 bcb1bebe15b798eb5ac949a86bcd4970 543 Gene3D G3DSA:3.30.565.10 392 539 2.7E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Gene3D G3DSA:1.10.287.130 264 329 2.3E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SMART SM00388 268 333 1.5E-23 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Gene3D G3DSA:3.30.70.270 1053 1218 1.0E-51 T 23-04-2016 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF47226 756 769 3.7E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF47226 798 881 3.7E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1050 1208 4.2E-44 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SMART SM00387 380 496 1.5E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Gene3D G3DSA:3.40.50.2300 659 781 1.2E-43 T 23-04-2016 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF55874 322 491 7.86E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Gene3D G3DSA:1.20.120.160 798 882 5.4E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF47384 254 333 2.16E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF52172 512 640 3.13E-13 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SMART SM00052 1221 1467 1.0E-118 T 23-04-2016 IPR001633 EAL domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF55073 1056 1211 1.73E-45 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SMART SM00267 1040 1211 2.1E-58 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Pfam PF00563 EAL domain 1227 1462 1.7E-73 T 23-04-2016 IPR001633 EAL domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 494 1.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF52172 921 1082 3.84E-16 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 449 8.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 8.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 8.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 8.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Gene3D G3DSA:3.40.50.2300 512 639 1.9E-13 T 23-04-2016 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF141868 1226 1477 4.71E-92 T 23-04-2016 IPR001633 EAL domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Gene3D G3DSA:3.40.50.2300 920 1046 4.8E-15 T 23-04-2016 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SUPERFAMILY SSF52172 659 784 1.21E-38 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Gene3D G3DSA:3.30.565.10 335 493 5.5E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SMART SM00448 659 773 6.2E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SMART SM00448 923 1034 2.0E-6 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 SMART SM00448 515 632 0.017 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 PANTHER PTHR24423 1 15 5.3E-151 T 23-04-2016 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 PANTHER PTHR24423 637 812 5.3E-151 T 23-04-2016 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 PANTHER PTHR24423 195 499 5.3E-151 T 23-04-2016 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1051 1205 1.7E-46 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Pfam PF00072 Response regulator receiver domain 925 1034 6.5E-6 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Pfam PF00072 Response regulator receiver domain 661 772 7.6E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Pfam PF00072 Response regulator receiver domain 517 632 1.8E-6 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Gene3D G3DSA:3.20.20.450 1225 1473 1.3E-99 T 23-04-2016 IPR001633 EAL domain CYCME_RS05095 dbb309145e4b48b5c1d24aead401154d 1487 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 331 4.5E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 SUPERFAMILY SSF52540 6 239 4.38E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 PANTHER PTHR19211:SF38 1 526 0.0 T 23-04-2016 CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 Pfam PF12848 ABC transporter 224 301 3.8E-21 T 23-04-2016 IPR032781 ABC-transporter extension domain CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 PANTHER PTHR19211 1 526 0.0 T 23-04-2016 CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 Pfam PF00005 ABC transporter 335 466 6.5E-18 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 Pfam PF00005 ABC transporter 18 184 1.5E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 SMART SM00382 343 511 7.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 SMART SM00382 26 238 1.7E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 Gene3D G3DSA:3.40.50.300 5 271 4.2E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 Gene3D G3DSA:3.40.50.300 319 528 1.9E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09740 efc59df99e4b7fa6f37d283cb0b7ac65 536 SUPERFAMILY SSF52540 299 527 6.89E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 PANTHER PTHR18866 4 647 3.6E-293 T 23-04-2016 CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 PANTHER PTHR18866:SF102 4 647 3.6E-293 T 23-04-2016 CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 SUPERFAMILY SSF51246 333 446 2.72E-35 T 23-04-2016 IPR011054 Rudiment single hybrid motif CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 SUPERFAMILY SSF56059 85 345 8.08E-65 T 23-04-2016 CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 Gene3D G3DSA:3.30.1490.20 131 204 1.5E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 SUPERFAMILY SSF52440 2 115 3.45E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 1.5E-73 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 SMART SM00878 338 444 1.2E-42 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 Gene3D G3DSA:3.30.470.20 205 447 5.3E-96 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 Gene3D G3DSA:3.40.50.20 4 130 3.8E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 Pfam PF00364 Biotin-requiring enzyme 584 647 2.2E-13 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 SUPERFAMILY SSF51230 579 647 3.53E-17 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 7.7E-44 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 Pfam PF02785 Biotin carboxylase C-terminal domain 338 445 5.4E-33 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CYCME_RS05930 66e91055f32a558f3b2c73105be0b8f2 656 Gene3D G3DSA:2.40.50.100 580 647 1.5E-18 T 23-04-2016 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 SMART SM00448 4 115 4.1E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 Pfam PF00072 Response regulator receiver domain 6 115 3.3E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 SUPERFAMILY SSF46689 341 436 2.96E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 Gene3D G3DSA:3.40.50.300 126 301 1.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 Gene3D G3DSA:1.10.10.60 397 435 1.8E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 PANTHER PTHR32071 1 446 8.1E-201 T 23-04-2016 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 SUPERFAMILY SSF52540 133 369 1.05E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 436 5.1E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 PANTHER PTHR32071:SF21 1 446 8.1E-201 T 23-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 153 166 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 Gene3D G3DSA:1.10.8.60 302 374 5.0E-20 T 23-04-2016 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 Gene3D G3DSA:3.40.50.2300 3 122 4.2E-35 T 23-04-2016 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 SUPERFAMILY SSF52172 3 174 4.27E-41 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 Pfam PF00158 Sigma-54 interaction domain 132 295 3.2E-66 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 SMART SM00382 149 292 4.0E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 9.7E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS09115 cfb756a4e1100775a1eff69770221e93 446 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 9.7E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS02210 c33519e63813559215381a04146fa676 247 PANTHER PTHR23416 1 47 5.5E-24 T 23-04-2016 CYCME_RS02210 c33519e63813559215381a04146fa676 247 PANTHER PTHR23416:SF8 80 206 5.5E-24 T 23-04-2016 CYCME_RS02210 c33519e63813559215381a04146fa676 247 SUPERFAMILY SSF51161 1 225 1.09E-41 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS02210 c33519e63813559215381a04146fa676 247 Gene3D G3DSA:2.160.10.10 87 215 9.4E-34 T 23-04-2016 CYCME_RS02210 c33519e63813559215381a04146fa676 247 PANTHER PTHR23416 80 206 5.5E-24 T 23-04-2016 CYCME_RS02210 c33519e63813559215381a04146fa676 247 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 154 188 8.4E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS02210 c33519e63813559215381a04146fa676 247 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 44 4.9E-7 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS02210 c33519e63813559215381a04146fa676 247 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 94 125 0.0018 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS02210 c33519e63813559215381a04146fa676 247 PANTHER PTHR23416:SF8 1 47 5.5E-24 T 23-04-2016 CYCME_RS02210 c33519e63813559215381a04146fa676 247 Gene3D G3DSA:2.160.10.10 1 86 8.1E-12 T 23-04-2016 CYCME_RS11215 9bbce117bef47d284706fb4d1e3df016 373 PANTHER PTHR10578 3 364 6.1E-142 T 23-04-2016 CYCME_RS11215 9bbce117bef47d284706fb4d1e3df016 373 Pfam PF01070 FMN-dependent dehydrogenase 28 367 7.3E-123 T 23-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 CYCME_RS11215 9bbce117bef47d284706fb4d1e3df016 373 Gene3D G3DSA:3.20.20.70 19 368 1.0E-124 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS11215 9bbce117bef47d284706fb4d1e3df016 373 PIRSF PIRSF000138 1 373 4.3E-122 T 23-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 CYCME_RS11215 9bbce117bef47d284706fb4d1e3df016 373 SUPERFAMILY SSF51395 18 369 1.4E-86 T 23-04-2016 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 84 1.4E-21 T 23-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 SUPERFAMILY SSF46626 57 80 2.04E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 SUPERFAMILY SSF46626 108 210 2.04E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 214 290 2.5E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 129 202 7.1E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 PANTHER PTHR33751 25 294 4.7E-83 T 23-04-2016 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 Gene3D G3DSA:1.10.760.10 213 294 3.4E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 Gene3D G3DSA:1.10.760.10 123 212 7.8E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 Gene3D G3DSA:1.10.760.10 62 84 7.8E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 SUPERFAMILY SSF46626 212 294 5.01E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 PIRSF PIRSF000006 1 296 3.2E-98 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 36 295 1.8E-87 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 CYCME_RS08945 241b0205217b802bcbfefeaa42ce0864 296 PANTHER PTHR33751:SF1 25 294 4.7E-83 T 23-04-2016 CYCME_RS05175 a0d2df6e2c33d63e6744ea27c00bf698 226 Pfam PF13860 FlgD Ig-like domain 111 179 2.5E-20 T 23-04-2016 IPR025965 FlgD Ig-like domain CYCME_RS05175 a0d2df6e2c33d63e6744ea27c00bf698 226 Pfam PF13861 FlgD Tudor-like domain 87 222 3.8E-15 T 23-04-2016 IPR025963 FlgD Tudor-like domain CYCME_RS05175 a0d2df6e2c33d63e6744ea27c00bf698 226 PANTHER PTHR30435 16 217 3.4E-46 T 23-04-2016 CYCME_RS05175 a0d2df6e2c33d63e6744ea27c00bf698 226 Pfam PF03963 Flagellar hook capping protein - N-terminal region 13 78 3.8E-22 T 23-04-2016 IPR005648 Flagellar hook capping protein CYCME_RS05175 a0d2df6e2c33d63e6744ea27c00bf698 226 PANTHER PTHR30435:SF15 16 217 3.4E-46 T 23-04-2016 CYCME_RS03900 6663558fb07d6ed3278dfe1712017401 255 PANTHER PTHR13696 4 255 2.7E-66 T 23-04-2016 CYCME_RS03900 6663558fb07d6ed3278dfe1712017401 255 PANTHER PTHR13696:SF66 4 255 2.7E-66 T 23-04-2016 CYCME_RS03900 6663558fb07d6ed3278dfe1712017401 255 Pfam PF13614 AAA domain 5 182 1.8E-39 T 23-04-2016 IPR025669 AAA domain CYCME_RS03900 6663558fb07d6ed3278dfe1712017401 255 Gene3D G3DSA:3.40.50.300 4 254 1.6E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03900 6663558fb07d6ed3278dfe1712017401 255 SUPERFAMILY SSF52540 1 254 4.44E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06095 a3e8843b9b45bffd7c986dcc57303f96 132 PANTHER PTHR34075:SF2 14 127 1.2E-23 T 23-04-2016 CYCME_RS06095 a3e8843b9b45bffd7c986dcc57303f96 132 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 21 54 6.3E-11 T 23-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CYCME_RS06095 a3e8843b9b45bffd7c986dcc57303f96 132 SUPERFAMILY SSF50249 15 120 6.51E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS06095 a3e8843b9b45bffd7c986dcc57303f96 132 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 55 115 1.6E-15 T 23-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CYCME_RS06095 a3e8843b9b45bffd7c986dcc57303f96 132 PANTHER PTHR34075 14 127 1.2E-23 T 23-04-2016 CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 SUPERFAMILY SSF52172 10 171 8.4E-12 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 328 1.8E-33 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 166 331 6.2E-34 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 SUPERFAMILY SSF55073 174 334 8.63E-38 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 PANTHER PTHR33121:SF10 342 594 1.7E-71 T 23-04-2016 CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 PANTHER PTHR33121 342 594 1.7E-71 T 23-04-2016 CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 Gene3D G3DSA:3.20.20.450 348 585 7.5E-79 T 23-04-2016 IPR001633 EAL domain CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 Gene3D G3DSA:3.40.50.2300 8 141 1.8E-8 T 23-04-2016 CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 SUPERFAMILY SSF141868 351 584 1.02E-75 T 23-04-2016 IPR001633 EAL domain CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 SMART SM00052 344 589 1.4E-76 T 23-04-2016 IPR001633 EAL domain CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 Pfam PF00563 EAL domain 352 584 2.8E-67 T 23-04-2016 IPR001633 EAL domain CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 Gene3D G3DSA:3.30.70.270 171 336 2.9E-43 T 23-04-2016 CYCME_RS09035 63c1de03e9548cfd80c2a5a2c1b55d56 612 SMART SM00267 158 332 7.9E-37 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS07970 735fee9b8f48420c6cf30da89ccc16b5 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 5.0E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS07970 735fee9b8f48420c6cf30da89ccc16b5 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.0E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS07970 735fee9b8f48420c6cf30da89ccc16b5 198 Gene3D G3DSA:1.10.357.10 7 196 1.8E-29 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CYCME_RS07970 735fee9b8f48420c6cf30da89ccc16b5 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 5.8E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS07970 735fee9b8f48420c6cf30da89ccc16b5 198 PANTHER PTHR30055 10 167 8.6E-17 T 23-04-2016 CYCME_RS07970 735fee9b8f48420c6cf30da89ccc16b5 198 SUPERFAMILY SSF46689 6 81 9.23E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 SUPERFAMILY SSF54368 3 98 3.66E-36 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 Gene3D G3DSA:3.10.20.70 3 105 3.1E-39 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 5.2E-30 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 PANTHER PTHR20852:SF15 1 138 1.4E-255 T 23-04-2016 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 PANTHER PTHR20852:SF15 160 469 1.4E-255 T 23-04-2016 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 23-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 1.4E-133 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 SMART SM01230 102 379 9.7E-145 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 Gene3D G3DSA:3.30.590.10 106 455 4.3E-134 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 1.0E-201 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 SUPERFAMILY SSF55931 102 468 9.42E-134 T 23-04-2016 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 PANTHER PTHR20852 1 138 1.4E-255 T 23-04-2016 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 PANTHER PTHR20852 160 469 1.4E-255 T 23-04-2016 CYCME_RS00130 ee4a5fa219a1b017bc796e5d417fd823 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 34 257 1.6E-58 T 23-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 SUPERFAMILY SSF81464 23 114 5.07E-25 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 Gene3D G3DSA:1.10.287.90 25 110 1.4E-23 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 120 246 4.4E-35 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PANTHER PTHR22888 2 276 2.5E-111 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PANTHER PTHR22888:SF2 2 276 2.5E-111 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 212 229 2.3E-41 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 116 135 2.3E-41 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 82 94 2.3E-41 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 94 114 2.3E-41 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 168 189 2.3E-41 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 192 212 2.3E-41 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 230 247 2.3E-41 T 23-04-2016 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 24 107 1.1E-12 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 Gene3D G3DSA:2.60.40.420 111 263 9.5E-55 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 193 241 - T 23-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 CYCME_RS03100 22c5d3d0f4c4ebb0278fe11963c0de45 283 SUPERFAMILY SSF49503 117 262 1.22E-52 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06320 16464c2bee087bdf0096d82e7a1949d3 439 Pfam PF13520 Amino acid permease 17 386 3.6E-30 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CYCME_RS06320 16464c2bee087bdf0096d82e7a1949d3 439 PIRSF PIRSF006060 1 439 4.3E-61 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CYCME_RS06320 16464c2bee087bdf0096d82e7a1949d3 439 PANTHER PTHR11785:SF385 14 380 3.6E-137 T 23-04-2016 CYCME_RS06320 16464c2bee087bdf0096d82e7a1949d3 439 PANTHER PTHR11785:SF385 406 424 3.6E-137 T 23-04-2016 CYCME_RS06320 16464c2bee087bdf0096d82e7a1949d3 439 PANTHER PTHR11785 14 380 3.6E-137 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CYCME_RS06320 16464c2bee087bdf0096d82e7a1949d3 439 PANTHER PTHR11785 406 424 3.6E-137 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 SUPERFAMILY SSF88659 494 596 4.71E-26 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Pfam PF03979 Sigma-70 factor, region 1.1 8 81 1.3E-23 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 360 585 3.8E-38 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 3 597 41.785 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Pfam PF00140 Sigma-70 factor, region 1.2 102 133 7.8E-11 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 360 596 4.6E-118 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PANTHER PTHR30603:SF0 311 600 9.8E-231 T 23-04-2016 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PANTHER PTHR30603:SF0 1 156 9.8E-231 T 23-04-2016 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 388 401 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PRINTS PR00046 Major sigma-70 factor signature 412 420 6.1E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PRINTS PR00046 Major sigma-70 factor signature 388 401 6.1E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PRINTS PR00046 Major sigma-70 factor signature 572 583 6.1E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PRINTS PR00046 Major sigma-70 factor signature 536 548 6.1E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PRINTS PR00046 Major sigma-70 factor signature 557 572 6.1E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PANTHER PTHR30603 311 600 9.8E-231 T 23-04-2016 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 PANTHER PTHR30603 1 156 9.8E-231 T 23-04-2016 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Gene3D G3DSA:1.10.10.10 437 488 4.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Pfam PF04546 Sigma-70, non-essential region 143 333 5.5E-44 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 557 583 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Pfam PF04545 Sigma-70, region 4 532 585 6.3E-19 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Gene3D G3DSA:1.10.601.10 116 433 3.2E-109 T 23-04-2016 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 SUPERFAMILY SSF88946 119 431 3.45E-89 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Pfam PF04542 Sigma-70 region 2 364 433 1.7E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 SUPERFAMILY SSF88659 437 510 6.73E-18 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Gene3D G3DSA:1.10.10.10 526 597 4.8E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00515 9ad6d61865df2ed9644c104adc1c3128 600 Pfam PF04539 Sigma-70 region 3 443 519 1.3E-27 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS09485 843cfe1403eabb79d782b6ec743dc0fb 324 SUPERFAMILY SSF144083 259 321 1.96E-16 T 23-04-2016 CYCME_RS09485 843cfe1403eabb79d782b6ec743dc0fb 324 Gene3D G3DSA:1.20.58.340 256 324 1.3E-21 T 23-04-2016 CYCME_RS09485 843cfe1403eabb79d782b6ec743dc0fb 324 Gene3D G3DSA:1.20.58.340 146 244 1.5E-17 T 23-04-2016 CYCME_RS09485 843cfe1403eabb79d782b6ec743dc0fb 324 Pfam PF01544 CorA-like Mg2+ transporter protein 35 320 5.1E-67 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CYCME_RS09485 843cfe1403eabb79d782b6ec743dc0fb 324 PANTHER PTHR21535 36 324 2.2E-29 T 23-04-2016 CYCME_RS09485 843cfe1403eabb79d782b6ec743dc0fb 324 SUPERFAMILY SSF143865 6 254 2.75E-52 T 23-04-2016 CYCME_RS09485 843cfe1403eabb79d782b6ec743dc0fb 324 Gene3D G3DSA:3.30.460.20 23 124 1.6E-4 T 23-04-2016 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 2.8E-135 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 Pfam PF01979 Amidohydrolase family 12 309 1.4E-16 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 Hamap MF_00219 Dihydroorotase [pyrC]. 3 343 42.122 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 PANTHER PTHR11647:SF59 1 317 4.2E-155 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 SUPERFAMILY SSF51556 3 342 3.78E-138 T 23-04-2016 IPR032466 Metal-dependent hydrolase CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 Gene3D G3DSA:3.20.20.140 2 342 1.9E-126 T 23-04-2016 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 PIRSF PIRSF001237 1 343 1.8E-138 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS11580 022468b661a132dfef85f60d6b9b4b55 343 PANTHER PTHR11647 1 317 4.2E-155 T 23-04-2016 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.3E-25 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 SUPERFAMILY SSF143034 2 64 1.57E-23 T 23-04-2016 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 8.8E-20 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 8.8E-20 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 8.8E-20 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 Pfam PF01632 Ribosomal protein L35 2 62 4.3E-24 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.587 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CYCME_RS08815 43465a0d82aa70ac0fed68322ed7dc50 65 PANTHER PTHR33343 1 64 1.2E-26 T 23-04-2016 CYCME_RS02980 fa726e35bcaebb0441cf4dd7650b3bec 248 SUPERFAMILY SSF161098 52 231 8.63E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS02980 fa726e35bcaebb0441cf4dd7650b3bec 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 229 8.8E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS02980 fa726e35bcaebb0441cf4dd7650b3bec 248 Gene3D G3DSA:1.10.3720.10 52 242 2.4E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS02980 fa726e35bcaebb0441cf4dd7650b3bec 248 PANTHER PTHR30151 1 247 4.0E-52 T 23-04-2016 CYCME_RS02980 fa726e35bcaebb0441cf4dd7650b3bec 248 PANTHER PTHR30151:SF0 1 247 4.0E-52 T 23-04-2016 CYCME_RS03320 9a18f40531db3d1a8d44574ee6c6570d 338 Gene3D G3DSA:3.40.50.2000 1 150 5.4E-32 T 23-04-2016 CYCME_RS03320 9a18f40531db3d1a8d44574ee6c6570d 338 SUPERFAMILY SSF53756 1 336 1.51E-75 T 23-04-2016 CYCME_RS03320 9a18f40531db3d1a8d44574ee6c6570d 338 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 308 7.8E-104 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CYCME_RS03320 9a18f40531db3d1a8d44574ee6c6570d 338 PANTHER PTHR30160 1 338 8.7E-110 T 23-04-2016 CYCME_RS03320 9a18f40531db3d1a8d44574ee6c6570d 338 PANTHER PTHR30160:SF8 1 338 8.7E-110 T 23-04-2016 CYCME_RS03320 9a18f40531db3d1a8d44574ee6c6570d 338 Gene3D G3DSA:3.40.50.2000 166 337 1.3E-44 T 23-04-2016 CYCME_RS03320 9a18f40531db3d1a8d44574ee6c6570d 338 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 312 4.2E-62 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 402 3.9E-120 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 403 2.5E-131 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 PIRSF PIRSF000726 58 406 9.0E-144 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 SUPERFAMILY SSF53633 4 242 4.45E-69 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 Pfam PF00696 Amino acid kinase family 5 230 6.4E-47 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 PANTHER PTHR21499 1 404 4.1E-165 T 23-04-2016 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 SUPERFAMILY SSF55021 329 404 6.72E-25 T 23-04-2016 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 Pfam PF13840 ACT domain 338 399 8.2E-17 T 23-04-2016 IPR027795 GATS-like ACT domain CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 Pfam PF01842 ACT domain 268 326 1.2E-11 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 SUPERFAMILY SSF55021 248 327 5.73E-19 T 23-04-2016 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 PANTHER PTHR21499:SF27 1 404 4.1E-165 T 23-04-2016 CYCME_RS08330 318dcabfe1e867b2c6bffc83e1adf5b3 406 Gene3D G3DSA:3.40.1160.10 1 248 8.4E-69 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS11170 466103a9a8e3c822a6f5e93cb455f491 405 SUPERFAMILY SSF51998 1 402 2.93E-66 T 23-04-2016 CYCME_RS11170 466103a9a8e3c822a6f5e93cb455f491 405 Gene3D G3DSA:3.20.70.20 1 401 1.1E-71 T 23-04-2016 CYCME_RS11170 466103a9a8e3c822a6f5e93cb455f491 405 PANTHER PTHR37560 1 393 1.9E-38 T 23-04-2016 CYCME_RS11170 466103a9a8e3c822a6f5e93cb455f491 405 PANTHER PTHR37560:SF2 1 393 1.9E-38 T 23-04-2016 CYCME_RS11170 466103a9a8e3c822a6f5e93cb455f491 405 Pfam PF05167 Uncharacterised ACR (DUF711) 1 393 9.4E-95 T 23-04-2016 IPR007841 Uncharacterised protein family UPF0210 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 Pfam PF02547 Queuosine biosynthesis protein 4 334 6.0E-132 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 Gene3D G3DSA:2.40.10.240 62 130 2.7E-13 T 23-04-2016 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 335 46.084 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 Gene3D G3DSA:3.40.1780.10 173 334 1.2E-100 T 23-04-2016 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 Gene3D G3DSA:3.40.1780.10 1 60 1.2E-100 T 23-04-2016 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 PANTHER PTHR30307 2 341 9.6E-170 T 23-04-2016 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 334 4.0E-134 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 SUPERFAMILY SSF111337 1 334 5.36E-133 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05680 807e59c472052bece7a0d20488480f20 342 PANTHER PTHR30307:SF0 2 341 9.6E-170 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 Gene3D G3DSA:3.40.50.880 154 376 9.5E-79 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00097 Anthranilate synthase component II signature 347 360 1.1E-5 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00097 Anthranilate synthase component II signature 262 273 1.1E-5 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00097 Anthranilate synthase component II signature 234 243 1.1E-5 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PANTHER PTHR11405 3 377 3.8E-229 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 SUPERFAMILY SSF52317 154 375 9.78E-61 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 132 8.7E-53 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 4.3E-39 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 262 278 4.3E-39 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 192 206 4.3E-39 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 296 4.3E-39 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 304 315 4.3E-39 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 Pfam PF00117 Glutamine amidotransferase class-I 195 369 9.5E-46 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 262 273 1.1E-10 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 243 1.1E-10 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 1.1E-10 T 23-04-2016 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 SUPERFAMILY SSF52021 4 140 4.97E-57 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 376 47.307 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 SMART SM01097 3 133 1.1E-90 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 Gene3D G3DSA:3.50.30.20 4 142 5.6E-62 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04950 c64c1277b1a33474edea6a05d882d5ac 377 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 373 2.1E-145 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 SMART SM00929 83 123 1.2E-12 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 7.5E-17 T 23-04-2016 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 Pfam PF13459 4Fe-4S single cluster domain 139 207 7.1E-13 T 23-04-2016 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 Gene3D G3DSA:3.10.20.30 4 49 9.6E-8 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 PANTHER PTHR11615:SF38 5 212 1.8E-37 T 23-04-2016 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 Gene3D G3DSA:3.30.70.20 139 214 3.7E-6 T 23-04-2016 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 PIRSF PIRSF000309 1 234 7.0E-80 T 23-04-2016 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit MetaCyc: PWY-5382|MetaCyc: PWY-6758 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 SUPERFAMILY SSF54292 5 121 1.4E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 PANTHER PTHR11615 5 212 1.8E-37 T 23-04-2016 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 SUPERFAMILY SSF54862 139 207 3.87E-5 T 23-04-2016 CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 Gene3D G3DSA:3.10.20.30 50 68 4.5E-4 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS08715 ef6535786adf68317e912ca63264cbb5 240 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 118 1.9E-12 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 PANTHER PTHR34183:SF1 23 285 4.6E-78 T 23-04-2016 CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 Gene3D G3DSA:2.40.40.10 116 166 5.8E-5 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 SUPERFAMILY SSF50685 71 163 1.19E-11 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 Pfam PF03330 Lytic transglycolase 79 167 4.3E-27 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 Pfam PF05036 Sporulation related domain 210 279 3.7E-8 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 Gene3D G3DSA:3.30.70.1070 206 282 2.2E-12 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 SUPERFAMILY SSF110997 207 282 1.7E-11 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 PANTHER PTHR34183 23 285 4.6E-78 T 23-04-2016 CYCME_RS03455 89d12e68e6180c3d7ea1614dc27af1f6 285 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 175 1.4E-45 T 23-04-2016 IPR012997 Rare lipoprotein A CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 SUPERFAMILY SSF53474 39 329 9.38E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 Gene3D G3DSA:3.40.50.1820 30 324 6.7E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 PANTHER PTHR10992 293 330 2.9E-54 T 23-04-2016 CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 PANTHER PTHR10992 32 276 2.9E-54 T 23-04-2016 CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 Pfam PF00561 alpha/beta hydrolase fold 65 165 1.8E-22 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 PANTHER PTHR10992:SF827 293 330 2.9E-54 T 23-04-2016 CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 PANTHER PTHR10992:SF827 32 276 2.9E-54 T 23-04-2016 CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 7.3E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 PRINTS PR00111 Alpha/beta hydrolase fold signature 150 163 7.3E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 106 7.3E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS05580 c4a198aec2ed4aacd911e309e8e22453 330 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 7.3E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 SUPERFAMILY SSF82714 193 274 1.2E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 Gene3D G3DSA:1.10.3850.10 811 1024 2.8E-51 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 Gene3D G3DSA:1.10.3850.10 283 499 2.5E-46 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 SUPERFAMILY SSF82693 46 143 1.34E-18 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 PANTHER PTHR32063 6 1026 0.0 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 SUPERFAMILY SSF82866 299 497 1.7E-36 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 SUPERFAMILY SSF82714 722 806 3.27E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 PANTHER PTHR32063:SF18 6 1026 0.0 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 Gene3D G3DSA:3.30.2090.10 191 275 1.4E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 SUPERFAMILY SSF82866 804 1024 1.57E-43 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.7E-19 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 Gene3D G3DSA:3.30.70.1430 46 150 9.7E-22 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 SUPERFAMILY SSF82693 277 332 2.22E-17 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 SUPERFAMILY SSF82693 145 190 2.22E-17 T 23-04-2016 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 Pfam PF00873 AcrB/AcrD/AcrF family 12 1022 5.7E-167 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 Gene3D G3DSA:3.30.2090.10 723 806 2.2E-8 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS07975 1e08be0de7b76594c719dcde997c8183 1027 SUPERFAMILY SSF82693 568 646 4.45E-5 T 23-04-2016 CYCME_RS02645 71c9ba9868e21663e91ce864a19c465e 371 PANTHER PTHR38674 1 325 3.4E-27 T 23-04-2016 CYCME_RS02645 71c9ba9868e21663e91ce864a19c465e 371 Pfam PF00487 Fatty acid desaturase 100 299 3.7E-19 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 CYCME_RS02645 71c9ba9868e21663e91ce864a19c465e 371 PANTHER PTHR38674:SF1 1 325 3.4E-27 T 23-04-2016 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 6.1E-39 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 6.1E-39 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 6.1E-39 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 6.1E-39 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 6.1E-39 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 6.1E-39 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 PANTHER PTHR11728 1 332 9.8E-113 T 23-04-2016 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 323 33.72 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 Gene3D G3DSA:1.10.1040.10 184 327 9.9E-51 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 SUPERFAMILY SSF48179 183 330 6.12E-50 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 Gene3D G3DSA:3.40.50.720 5 174 5.3E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 320 1.9E-46 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 PIRSF PIRSF000114 1 333 3.8E-99 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 161 9.7E-48 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CYCME_RS00160 f2da4b17c41e6eab73083607f2031b1e 336 SUPERFAMILY SSF51735 5 174 2.31E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.637 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 SMART SM00883 2 94 4.5E-54 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.9E-34 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 SUPERFAMILY SSF50129 1 95 1.6E-34 T 23-04-2016 IPR011032 GroES-like CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 PRINTS PR00297 10kDa chaperonin signature 60 72 6.8E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 PRINTS PR00297 10kDa chaperonin signature 81 94 6.8E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 PRINTS PR00297 10kDa chaperonin signature 3 18 6.8E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 PRINTS PR00297 10kDa chaperonin signature 25 46 6.8E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 Gene3D G3DSA:2.30.33.40 1 95 1.4E-37 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS10595 a8beedcf1cf297b695d4e96e73103ff6 95 PANTHER PTHR10772 1 95 8.4E-43 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 SUPERFAMILY SSF53383 31 394 7.5E-123 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 393 4.4E-140 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 PANTHER PTHR11808 2 393 6.8E-191 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 PIRSF PIRSF001434 4 396 1.9E-130 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 PANTHER PTHR11808:SF36 2 393 6.8E-191 T 23-04-2016 CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 Gene3D G3DSA:3.40.640.10 10 259 4.8E-93 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 13 393 1.0E-174 T 23-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 CYCME_RS07315 08da5b2afd29f67385edd1528390af75 396 Gene3D G3DSA:3.90.1150.10 261 394 8.8E-51 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 PANTHER PTHR21266:SF2 21 347 9.8E-35 T 23-04-2016 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 Gene3D G3DSA:3.90.380.10 148 392 1.8E-36 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 189 353 5.8E-11 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 Pfam PF00355 Rieske [2Fe-2S] domain 43 127 3.0E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 Gene3D G3DSA:2.102.10.10 43 147 1.1E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 PANTHER PTHR21266 21 347 9.8E-35 T 23-04-2016 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 SUPERFAMILY SSF55961 160 391 6.12E-34 T 23-04-2016 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 182 204 7.6E-23 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 7.6E-23 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 7.6E-23 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 142 168 7.6E-23 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 7.6E-23 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 86 109 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS12430 ec10c7a77c713b817d2f2e19a8984a3d 396 SUPERFAMILY SSF50022 15 157 1.7E-37 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 SMART SM00116 156 204 5.5E-7 T 23-04-2016 IPR000644 CBS domain CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 SMART SM00116 95 142 5.6E-11 T 23-04-2016 IPR000644 CBS domain CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 Pfam PF00571 CBS domain 151 202 5.7E-6 T 23-04-2016 IPR000644 CBS domain CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 Pfam PF00571 CBS domain 94 138 5.6E-11 T 23-04-2016 IPR000644 CBS domain CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 SUPERFAMILY SSF54631 94 202 3.41E-27 T 23-04-2016 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 3.3E-162 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 83.868 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 PANTHER PTHR11911:SF6 1 279 3.6E-243 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 PANTHER PTHR11911:SF6 297 485 3.6E-243 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 Gene3D G3DSA:3.20.20.70 3 485 3.8E-199 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 SMART SM01240 6 473 0.0 T 23-04-2016 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 PIRSF PIRSF000130 1 488 1.4E-204 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 1.3E-189 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 PANTHER PTHR11911 1 279 3.6E-243 T 23-04-2016 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 PANTHER PTHR11911 297 485 3.6E-243 T 23-04-2016 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 SUPERFAMILY SSF51412 215 477 4.06E-123 T 23-04-2016 CYCME_RS09660 8390245b67e96d4bb3d2ed216ec351e3 488 SUPERFAMILY SSF51412 2 89 4.06E-123 T 23-04-2016 CYCME_RS02685 3482c0e695d86c58153f17ce5f8cbde4 440 Pfam PF13401 AAA domain 41 169 2.3E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS02685 3482c0e695d86c58153f17ce5f8cbde4 440 Gene3D G3DSA:3.40.50.300 33 182 2.9E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02685 3482c0e695d86c58153f17ce5f8cbde4 440 SUPERFAMILY SSF52540 6 264 1.97E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02685 3482c0e695d86c58153f17ce5f8cbde4 440 PANTHER PTHR35894:SF1 2 265 4.9E-75 T 23-04-2016 CYCME_RS02685 3482c0e695d86c58153f17ce5f8cbde4 440 SMART SM00382 42 177 0.0051 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS02685 3482c0e695d86c58153f17ce5f8cbde4 440 PANTHER PTHR35894 2 265 4.9E-75 T 23-04-2016 CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 SUPERFAMILY SSF55073 274 427 8.63E-27 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 PANTHER PTHR33121 446 683 6.4E-38 T 23-04-2016 CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 PANTHER PTHR33121:SF10 446 683 6.4E-38 T 23-04-2016 CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 SMART SM00267 257 426 1.2E-24 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 Gene3D G3DSA:3.30.70.270 270 428 1.1E-29 T 23-04-2016 CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 SUPERFAMILY SSF141868 445 682 3.27E-51 T 23-04-2016 IPR001633 EAL domain CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 Gene3D G3DSA:3.20.20.450 445 685 1.5E-52 T 23-04-2016 IPR001633 EAL domain CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 270 426 4.1E-21 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 Pfam PF00563 EAL domain 446 679 7.3E-52 T 23-04-2016 IPR001633 EAL domain CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 SMART SM00052 438 687 9.7E-33 T 23-04-2016 IPR001633 EAL domain CYCME_RS04620 1b45fb38140b381878fb1175c52fcf1d 691 Pfam PF00990 Diguanylate cyclase, GGDEF domain 270 422 3.2E-22 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PANTHER PTHR11405:SF1 2 301 1.3E-145 T 23-04-2016 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 Gene3D G3DSA:3.40.50.1370 142 287 1.0E-57 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 144 6.6E-50 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 1.19E-25 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.19E-25 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.19E-25 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.19E-25 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 5.25E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 5.25E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 5.25E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 5.25E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PRINTS PR00102 Ornithine carbamoyltransferase signature 217 227 5.25E-31 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 Gene3D G3DSA:3.40.50.1370 2 141 1.9E-55 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 300 1.3E-119 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 PANTHER PTHR11405 2 301 1.3E-145 T 23-04-2016 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 298 3.3E-50 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 301 79.967 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CYCME_RS11610 c0e4c39b88732475067e33fe5bb0a129 301 SUPERFAMILY SSF53671 3 300 1.83E-103 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 SUPERFAMILY SSF53850 3 216 8.29E-85 T 23-04-2016 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 PIRSF PIRSF001438 1 309 2.9E-120 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 PANTHER PTHR11557:SF0 1 309 8.1E-158 T 23-04-2016 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.521 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 Gene3D G3DSA:3.30.160.40 219 303 9.4E-29 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 2.9E-80 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 SUPERFAMILY SSF54782 218 307 1.83E-27 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 PANTHER PTHR11557 1 309 8.1E-158 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 5.6E-19 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 Gene3D G3DSA:3.40.190.10 109 197 2.7E-38 T 23-04-2016 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 Gene3D G3DSA:3.40.190.10 3 108 6.8E-49 T 23-04-2016 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 8.5E-49 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 8.5E-49 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 8.5E-49 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 8.5E-49 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 8.5E-49 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01700 fd285e3132cde73984b929264e3ad7ee 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 6.7E-115 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS10840 b4ce1775632a575e0657a794a601b9d1 188 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 177 7.0E-45 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 CYCME_RS10840 b4ce1775632a575e0657a794a601b9d1 188 Gene3D G3DSA:1.20.1200.10 17 180 1.1E-65 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CYCME_RS10840 b4ce1775632a575e0657a794a601b9d1 188 SUPERFAMILY SSF89028 7 178 3.53E-62 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CYCME_RS10840 b4ce1775632a575e0657a794a601b9d1 188 Pfam PF01923 Cobalamin adenosyltransferase 8 165 8.5E-59 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CYCME_RS10840 b4ce1775632a575e0657a794a601b9d1 188 PANTHER PTHR12213 4 185 3.1E-80 T 23-04-2016 CYCME_RS10840 b4ce1775632a575e0657a794a601b9d1 188 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 178 6.8E-60 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 CYCME_RS10840 b4ce1775632a575e0657a794a601b9d1 188 PANTHER PTHR12213:SF0 4 185 3.1E-80 T 23-04-2016 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 SMART SM00845 327 475 2.1E-75 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 Pfam PF02934 GatB/GatE catalytic domain 5 287 2.3E-112 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 SUPERFAMILY SSF89095 296 400 1.57E-34 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 SUPERFAMILY SSF55931 4 295 2.22E-122 T 23-04-2016 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 Pfam PF02637 GatB domain 327 475 1.4E-50 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 476 38.303 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 PANTHER PTHR11659 2 476 2.1E-261 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 475 1.6E-179 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CYCME_RS03500 1ffe80bf9390b8afa7d572b0a9ccd67c 477 PANTHER PTHR11659:SF0 2 476 2.1E-261 T 23-04-2016 CYCME_RS01795 19b5c61dd571ab0d14da298eafcd7f30 249 SUPERFAMILY SSF53335 18 242 5.31E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS01795 19b5c61dd571ab0d14da298eafcd7f30 249 PANTHER PTHR10108:SF864 3 248 1.2E-146 T 23-04-2016 CYCME_RS01795 19b5c61dd571ab0d14da298eafcd7f30 249 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 23 248 1.1E-80 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CYCME_RS01795 19b5c61dd571ab0d14da298eafcd7f30 249 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 34 49 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CYCME_RS01795 19b5c61dd571ab0d14da298eafcd7f30 249 Pfam PF01209 ubiE/COQ5 methyltransferase family 19 248 1.8E-92 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CYCME_RS01795 19b5c61dd571ab0d14da298eafcd7f30 249 Gene3D G3DSA:3.40.50.150 22 242 8.2E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS01795 19b5c61dd571ab0d14da298eafcd7f30 249 PANTHER PTHR10108 3 248 1.2E-146 T 23-04-2016 CYCME_RS01795 19b5c61dd571ab0d14da298eafcd7f30 249 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 14 248 37.812 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 22 553 2.0E-98 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 PANTHER PTHR30046:SF0 1 554 5.8E-152 T 23-04-2016 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 Pfam PF01514 Secretory protein of YscJ/FliF family 28 218 7.1E-66 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 Pfam PF08345 Flagellar M-ring protein C-terminal 251 422 7.5E-46 T 23-04-2016 IPR013556 Flagellar M-ring C-terminal CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 PANTHER PTHR30046 1 554 5.8E-152 T 23-04-2016 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 PRINTS PR01009 Flagellar M-ring protein signature 194 212 5.5E-35 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 PRINTS PR01009 Flagellar M-ring protein signature 264 282 5.5E-35 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 PRINTS PR01009 Flagellar M-ring protein signature 344 368 5.5E-35 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 PRINTS PR01009 Flagellar M-ring protein signature 151 165 5.5E-35 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 PRINTS PR01009 Flagellar M-ring protein signature 119 137 5.5E-35 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CYCME_RS09105 623059e6b7483cafd3a60f1c8067138c 554 PIRSF PIRSF004862 1 554 5.5E-141 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CYCME_RS04090 6c6f25652e6b121185107aac44347785 129 Gene3D G3DSA:2.30.30.220 1 102 1.2E-42 T 23-04-2016 IPR007481 Stringent starvation protein B CYCME_RS04090 6c6f25652e6b121185107aac44347785 129 PIRSF PIRSF005276 1 129 9.1E-46 T 23-04-2016 IPR007481 Stringent starvation protein B CYCME_RS04090 6c6f25652e6b121185107aac44347785 129 PANTHER PTHR37486 1 129 1.8E-46 T 23-04-2016 CYCME_RS04090 6c6f25652e6b121185107aac44347785 129 PANTHER PTHR37486:SF1 1 129 1.8E-46 T 23-04-2016 CYCME_RS04090 6c6f25652e6b121185107aac44347785 129 Pfam PF04386 Stringent starvation protein B 4 119 9.5E-31 T 23-04-2016 IPR007481 Stringent starvation protein B CYCME_RS04090 6c6f25652e6b121185107aac44347785 129 SUPERFAMILY SSF101738 1 112 5.23E-43 T 23-04-2016 IPR007481 Stringent starvation protein B CYCME_RS10700 e225eafeaef60ccc087a38b73c61013a 442 PANTHER PTHR24064:SF234 2 417 1.1E-96 T 23-04-2016 CYCME_RS10700 e225eafeaef60ccc087a38b73c61013a 442 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CYCME_RS10700 e225eafeaef60ccc087a38b73c61013a 442 PANTHER PTHR24064 2 417 1.1E-96 T 23-04-2016 CYCME_RS10700 e225eafeaef60ccc087a38b73c61013a 442 SUPERFAMILY SSF103473 10 437 8.24E-82 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS10700 e225eafeaef60ccc087a38b73c61013a 442 Pfam PF07690 Major Facilitator Superfamily 27 315 2.4E-38 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CYCME_RS10700 e225eafeaef60ccc087a38b73c61013a 442 Gene3D G3DSA:1.20.1250.20 19 203 1.4E-35 T 23-04-2016 CYCME_RS10700 e225eafeaef60ccc087a38b73c61013a 442 Gene3D G3DSA:1.20.1250.20 253 433 6.7E-26 T 23-04-2016 CYCME_RS05345 44295b7965e090411682a4b228f5904c 339 SMART SM00267 166 338 1.7E-50 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05345 44295b7965e090411682a4b228f5904c 339 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 334 9.9E-42 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05345 44295b7965e090411682a4b228f5904c 339 PANTHER PTHR10799 208 337 6.1E-22 T 23-04-2016 CYCME_RS05345 44295b7965e090411682a4b228f5904c 339 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 338 3.0E-42 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05345 44295b7965e090411682a4b228f5904c 339 SUPERFAMILY SSF55073 182 337 4.94E-42 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS05345 44295b7965e090411682a4b228f5904c 339 Gene3D G3DSA:3.30.70.270 179 337 6.6E-47 T 23-04-2016 CYCME_RS05345 44295b7965e090411682a4b228f5904c 339 PANTHER PTHR10799:SF750 208 337 6.1E-22 T 23-04-2016 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 SUPERFAMILY SSF88659 124 198 2.14E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 Pfam PF04539 Sigma-70 region 3 133 206 2.4E-11 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 Gene3D G3DSA:1.10.10.10 124 172 4.6E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 Pfam PF04542 Sigma-70 region 2 51 120 1.5E-20 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 PIRSF PIRSF000770 12 284 8.2E-38 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 Gene3D G3DSA:1.10.601.10 6 120 3.0E-56 T 23-04-2016 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 Gene3D G3DSA:1.10.10.10 214 280 1.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 75 88 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 Pfam PF00140 Sigma-70 factor, region 1.2 13 44 3.2E-9 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 274 2.0E-36 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 PRINTS PR00046 Major sigma-70 factor signature 99 107 5.8E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 PRINTS PR00046 Major sigma-70 factor signature 75 88 5.8E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 PRINTS PR00046 Major sigma-70 factor signature 245 260 5.8E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 PRINTS PR00046 Major sigma-70 factor signature 224 236 5.8E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 PRINTS PR00046 Major sigma-70 factor signature 260 271 5.8E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 4 286 37.325 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 PANTHER PTHR30603:SF15 13 287 5.9E-137 T 23-04-2016 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 SUPERFAMILY SSF88659 184 279 5.98E-24 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 5 285 1.2E-123 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 SUPERFAMILY SSF88946 10 121 2.35E-45 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 Pfam PF04545 Sigma-70, region 4 220 272 1.9E-16 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 245 271 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07550 835b342714d4cbf59b478e8cf6419640 287 PANTHER PTHR30603 13 287 5.9E-137 T 23-04-2016 CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 243 264 - T 23-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 151 265 3.2E-19 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 118 2.9E-4 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 Gene3D G3DSA:3.10.180.10 154 285 3.1E-45 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 PANTHER PTHR21366:SF10 189 302 2.0E-13 T 23-04-2016 CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 PANTHER PTHR21366:SF10 20 77 2.0E-13 T 23-04-2016 CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 TIGRFAM TIGR03211 catechol_2_3: catechol 2,3 dioxygenase 5 304 1.2E-127 T 23-04-2016 IPR017624 Catechol 2,3 dioxygenase GO:0008198|GO:0018577|GO:0019439|GO:0055114 KEGG: 00361+1.13.11.2|KEGG: 00362+1.13.11.2|KEGG: 00622+1.13.11.2|KEGG: 00643+1.13.11.2|MetaCyc: PWY-5419|MetaCyc: PWY-5641 CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 PANTHER PTHR21366 189 302 2.0E-13 T 23-04-2016 CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 PANTHER PTHR21366 20 77 2.0E-13 T 23-04-2016 CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 SUPERFAMILY SSF54593 1 267 3.99E-39 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS10245 9ab15e23a3a15d6dc5e574fe5c8bdbe0 306 Gene3D G3DSA:3.10.180.10 2 153 1.7E-37 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 Gene3D G3DSA:2.30.42.10 267 359 1.7E-28 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 Gene3D G3DSA:2.40.10.10 153 266 2.8E-44 T 23-04-2016 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 Pfam PF13180 PDZ domain 264 354 1.7E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 Gene3D G3DSA:2.40.10.10 36 150 8.3E-38 T 23-04-2016 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 Pfam PF13365 Trypsin-like peptidase domain 90 225 2.2E-30 T 23-04-2016 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 SUPERFAMILY SSF50156 385 456 2.37E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 PANTHER PTHR22939:SF101 14 380 4.5E-147 T 23-04-2016 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 SUPERFAMILY SSF50494 35 255 3.99E-65 T 23-04-2016 IPR009003 Peptidase S1, PA clan CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 Gene3D G3DSA:2.30.42.10 389 454 8.1E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 37 455 2.5E-150 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 SUPERFAMILY SSF50156 222 347 3.68E-25 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 PANTHER PTHR22939 14 380 4.5E-147 T 23-04-2016 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 SMART SM00228 264 346 2.5E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 SMART SM00228 371 449 1.9E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 370 445 2.7E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 1.1E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 1.1E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 1.1E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 PRINTS PR00834 HtrA/DegQ protease family signature 161 185 1.1E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 PRINTS PR00834 HtrA/DegQ protease family signature 304 316 1.1E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS02545 15c57fc49dd836feb6cd07db3bd36a1c 457 PRINTS PR00834 HtrA/DegQ protease family signature 196 213 1.1E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 Gene3D G3DSA:3.90.380.10 150 431 4.2E-96 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 Gene3D G3DSA:2.102.10.10 43 149 2.8E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 PANTHER PTHR21266:SF30 21 220 1.6E-62 T 23-04-2016 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 SUPERFAMILY SSF55961 159 432 8.63E-66 T 23-04-2016 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 PANTHER PTHR21266 21 220 1.6E-62 T 23-04-2016 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 163 422 1.1E-28 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 2.1E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 184 206 2.1E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 2.1E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 2.1E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 143 169 2.1E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 2.1E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 86 109 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 Pfam PF00355 Rieske [2Fe-2S] domain 44 122 1.1E-15 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12485 78343ce3528e12eb00b49d70fddd4be6 443 SUPERFAMILY SSF50022 10 158 1.7E-42 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Gene3D G3DSA:3.40.50.300 372 477 1.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Gene3D G3DSA:3.40.50.300 8 68 1.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Gene3D G3DSA:3.40.50.300 115 175 1.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 PANTHER PTHR11070:SF24 840 1121 7.4E-129 T 23-04-2016 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 PANTHER PTHR11070:SF24 6 80 7.4E-129 T 23-04-2016 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 PANTHER PTHR11070:SF24 345 802 7.4E-129 T 23-04-2016 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 PANTHER PTHR11070:SF24 107 195 7.4E-129 T 23-04-2016 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 SUPERFAMILY SSF52540 362 793 6.88E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 SUPERFAMILY SSF52540 107 162 6.88E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 SUPERFAMILY SSF52540 6 72 6.88E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 SUPERFAMILY SSF52540 841 869 6.88E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 PANTHER PTHR11070 840 1121 7.4E-129 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 PANTHER PTHR11070 6 80 7.4E-129 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 PANTHER PTHR11070 345 802 7.4E-129 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 PANTHER PTHR11070 107 195 7.4E-129 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Gene3D G3DSA:3.40.50.300 492 614 8.9E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Gene3D G3DSA:3.40.50.300 762 797 8.9E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Gene3D G3DSA:3.40.50.300 837 881 8.9E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 SUPERFAMILY SSF52980 955 1098 2.68E-6 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 477 8.4E-45 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Pfam PF12705 PD-(D/E)XK nuclease superfamily 944 1103 6.6E-5 T 23-04-2016 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Pfam PF13361 UvrD-like helicase C-terminal domain 491 635 7.8E-7 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CYCME_RS07735 5dddbf14e4d19290235904e9a3a7503c 1126 Pfam PF13361 UvrD-like helicase C-terminal domain 759 864 2.4E-16 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CYCME_RS10900 b4d74b7c52aad0361a0f92cc70baa785 130 Gene3D G3DSA:3.10.290.10 6 106 1.5E-33 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS10900 b4d74b7c52aad0361a0f92cc70baa785 130 Pfam PF01479 S4 domain 9 53 2.9E-12 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS10900 b4d74b7c52aad0361a0f92cc70baa785 130 SUPERFAMILY SSF55174 7 95 1.44E-26 T 23-04-2016 CYCME_RS10900 b4d74b7c52aad0361a0f92cc70baa785 130 SMART SM00363 9 75 5.2E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS10900 b4d74b7c52aad0361a0f92cc70baa785 130 PANTHER PTHR11079:SF70 10 45 1.6E-15 T 23-04-2016 CYCME_RS10900 b4d74b7c52aad0361a0f92cc70baa785 130 PANTHER PTHR11079 10 45 1.6E-15 T 23-04-2016 CYCME_RS10900 b4d74b7c52aad0361a0f92cc70baa785 130 PIRSF PIRSF016821 6 130 3.7E-39 T 23-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CYCME_RS07185 4643b3ae322287fba87d564810edc8a8 158 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 67 155 4.2E-27 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CYCME_RS07185 4643b3ae322287fba87d564810edc8a8 158 Gene3D G3DSA:3.10.50.40 28 157 5.9E-53 T 23-04-2016 CYCME_RS07185 4643b3ae322287fba87d564810edc8a8 158 SUPERFAMILY SSF54534 22 157 3.73E-49 T 23-04-2016 CYCME_RS07185 4643b3ae322287fba87d564810edc8a8 158 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 23 60 7.1E-12 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CYCME_RS07185 4643b3ae322287fba87d564810edc8a8 158 PANTHER PTHR10516 37 157 1.2E-48 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CYCME_RS10450 c51db4821a1a365e18b30ea57c564005 583 PANTHER PTHR36837 1 583 1.1E-199 T 23-04-2016 CYCME_RS10450 c51db4821a1a365e18b30ea57c564005 583 Pfam PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 10 50 9.5E-20 T 23-04-2016 IPR022211 Poly-beta-hydroxybutyrate polymerase N-terminal CYCME_RS10450 c51db4821a1a365e18b30ea57c564005 583 Gene3D G3DSA:3.40.50.1820 181 509 4.4E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10450 c51db4821a1a365e18b30ea57c564005 583 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 91 260 4.0E-59 T 23-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- CYCME_RS10450 c51db4821a1a365e18b30ea57c564005 583 PANTHER PTHR36837:SF2 1 583 1.1E-199 T 23-04-2016 CYCME_RS10450 c51db4821a1a365e18b30ea57c564005 583 SUPERFAMILY SSF53474 214 509 1.09E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 449 1.7E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 SUPERFAMILY SSF47384 224 288 5.49E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 SUPERFAMILY SSF55874 304 450 1.7E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 PANTHER PTHR24423:SF496 182 450 1.1E-59 T 23-04-2016 CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 PANTHER PTHR24423:SF496 1 6 1.1E-59 T 23-04-2016 CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 PANTHER PTHR24423 182 450 1.1E-59 T 23-04-2016 CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 PANTHER PTHR24423 1 6 1.1E-59 T 23-04-2016 CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 Gene3D G3DSA:3.30.565.10 304 450 2.1E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 SMART SM00387 342 451 3.0E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 9.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS06135 d2aa1b622e0bdb13f5ed1fe9add63260 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 9.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 PANTHER PTHR19211:SF49 1 532 2.4E-297 T 23-04-2016 CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 PANTHER PTHR19211 1 532 2.4E-297 T 23-04-2016 CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 Gene3D G3DSA:3.40.50.300 287 511 1.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 SUPERFAMILY SSF52540 1 69 2.96E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 SUPERFAMILY SSF52540 96 233 2.96E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 SMART SM00382 3 200 1.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 SMART SM00382 314 481 8.5E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 Gene3D G3DSA:3.40.50.300 1 252 6.6E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 SUPERFAMILY SSF52540 273 490 2.79E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 Pfam PF12848 ABC transporter 194 272 2.9E-26 T 23-04-2016 IPR032781 ABC-transporter extension domain CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 Pfam PF00005 ABC transporter 305 436 7.9E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS01395 9666ec733b1d3bf3e4a239c842754906 604 Pfam PF00005 ABC transporter 1 155 4.9E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 PANTHER PTHR24423 164 408 1.5E-17 T 23-04-2016 CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 SMART SM00388 223 290 7.4E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 Gene3D G3DSA:1.10.287.130 219 283 6.9E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 Gene3D G3DSA:3.30.565.10 292 401 5.3E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 SUPERFAMILY SSF47384 206 286 4.9E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 PANTHER PTHR24423:SF474 164 408 1.5E-17 T 23-04-2016 CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 Pfam PF00672 HAMP domain 151 216 8.1E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 SUPERFAMILY SSF55874 296 411 9.53E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04775 38936ba4b7e0dde5993c378c383a17a6 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 288 7.1E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 Gene3D G3DSA:1.10.287.990 20 82 1.0E-24 T 23-04-2016 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 PANTHER PTHR11404:SF8 1 190 2.2E-107 T 23-04-2016 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 SUPERFAMILY SSF54719 84 190 1.24E-42 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 PRINTS PR01703 Manganese superoxide dismutase signature 154 166 1.4E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 PRINTS PR01703 Manganese superoxide dismutase signature 117 125 1.4E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-21 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 PIRSF PIRSF000349 1 190 2.7E-82 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 88 188 8.8E-39 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 PANTHER PTHR11404 1 190 2.2E-107 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 SUPERFAMILY SSF46609 1 84 9.3E-36 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 81 1.6E-34 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS00870 b99fb1ab7fb63cdfa1e77cd1886039b8 190 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 156 163 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 PANTHER PTHR22617 58 142 2.1E-29 T 23-04-2016 CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 PRINTS PR00956 Flagellar motor switch protein FliN signature 109 124 6.1E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 PRINTS PR00956 Flagellar motor switch protein FliN signature 80 96 6.1E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 PRINTS PR00956 Flagellar motor switch protein FliN signature 96 109 6.1E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 PRINTS PR00956 Flagellar motor switch protein FliN signature 63 79 6.1E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 SUPERFAMILY SSF101801 60 141 3.53E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 60 134 6.1E-32 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 Gene3D G3DSA:2.30.330.10 55 143 3.9E-37 T 23-04-2016 CYCME_RS04520 ccb718120cab15045dc22b159a7bf042 143 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 64 133 4.2E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CYCME_RS05370 767b5c3368de9226412ae16612bfde81 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 2.0E-21 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CYCME_RS05370 767b5c3368de9226412ae16612bfde81 58 PANTHER PTHR35534 1 58 2.2E-26 T 23-04-2016 CYCME_RS05370 767b5c3368de9226412ae16612bfde81 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 18.512 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CYCME_RS05370 767b5c3368de9226412ae16612bfde81 58 SUPERFAMILY SSF57829 2 54 1.53E-18 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CYCME_RS05370 767b5c3368de9226412ae16612bfde81 58 Pfam PF01783 Ribosomal L32p protein family 2 55 1.6E-21 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CYCME_RS06230 10c0214d0f7753efd18d4f8839ddfc36 186 Pfam PF00571 CBS domain 39 84 1.3E-6 T 23-04-2016 IPR000644 CBS domain CYCME_RS06230 10c0214d0f7753efd18d4f8839ddfc36 186 Pfam PF00571 CBS domain 120 165 2.1E-5 T 23-04-2016 IPR000644 CBS domain CYCME_RS06230 10c0214d0f7753efd18d4f8839ddfc36 186 Gene3D G3DSA:3.20.20.70 36 168 4.6E-14 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS06230 10c0214d0f7753efd18d4f8839ddfc36 186 SMART SM00116 122 166 0.15 T 23-04-2016 IPR000644 CBS domain CYCME_RS06230 10c0214d0f7753efd18d4f8839ddfc36 186 SMART SM00116 41 89 0.32 T 23-04-2016 IPR000644 CBS domain CYCME_RS06230 10c0214d0f7753efd18d4f8839ddfc36 186 SUPERFAMILY SSF54631 39 165 2.6E-16 T 23-04-2016 CYCME_RS04630 fc00013021257093261a5f2f90ac1acd 343 PIRSF PIRSF004911 1 342 6.0E-111 T 23-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CYCME_RS04630 fc00013021257093261a5f2f90ac1acd 343 PANTHER PTHR30538 16 340 3.4E-109 T 23-04-2016 CYCME_RS04630 fc00013021257093261a5f2f90ac1acd 343 PANTHER PTHR30538:SF1 16 340 3.4E-109 T 23-04-2016 CYCME_RS04630 fc00013021257093261a5f2f90ac1acd 343 Gene3D G3DSA:3.20.20.70 104 313 1.5E-12 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS04630 fc00013021257093261a5f2f90ac1acd 343 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 4.9E-130 T 23-04-2016 IPR022462 Lysine-2,3-aminomutase-like CYCME_RS04630 fc00013021257093261a5f2f90ac1acd 343 SUPERFAMILY SSF102114 103 329 2.49E-24 T 23-04-2016 CYCME_RS04630 fc00013021257093261a5f2f90ac1acd 343 TIGRFAM TIGR00238 TIGR00238: KamA family protein 15 329 1.7E-91 T 23-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CYCME_RS04630 fc00013021257093261a5f2f90ac1acd 343 Pfam PF13353 4Fe-4S single cluster domain 115 182 4.5E-6 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 SUPERFAMILY SSF82714 700 785 8.37E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PANTHER PTHR32063:SF28 1 1009 0.0 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 Gene3D G3DSA:1.10.3850.10 794 1007 1.6E-52 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 Gene3D G3DSA:1.10.3850.10 274 490 1.7E-56 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 Gene3D G3DSA:3.30.70.1430 558 651 3.6E-4 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.2E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 3.2E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 3.2E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 3.2E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.2E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 3.2E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 3.2E-63 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 SUPERFAMILY SSF82693 267 323 1.31E-18 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 SUPERFAMILY SSF82693 138 181 1.31E-18 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 SUPERFAMILY SSF82714 182 265 5.49E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 Gene3D G3DSA:3.30.2090.10 181 266 3.8E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 PANTHER PTHR32063 1 1009 0.0 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 Pfam PF00873 AcrB/AcrD/AcrF family 4 1005 1.0E-244 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 SUPERFAMILY SSF82866 290 489 7.59E-45 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 SUPERFAMILY SSF82693 553 651 9.94E-11 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 SUPERFAMILY SSF82866 786 1007 1.96E-42 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 Gene3D G3DSA:3.30.2090.10 700 784 5.4E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 SUPERFAMILY SSF82693 43 130 2.38E-19 T 23-04-2016 CYCME_RS02485 dc297a5064b4850bf02ba7310e79010e 1014 Gene3D G3DSA:3.30.70.1430 44 140 1.9E-22 T 23-04-2016 CYCME_RS02130 df8272650a33c426f96f21b8e6c477bd 319 PANTHER PTHR32479:SF2 1 303 8.6E-40 T 23-04-2016 CYCME_RS02130 df8272650a33c426f96f21b8e6c477bd 319 Pfam PF02754 Cysteine-rich domain 93 175 1.7E-13 T 23-04-2016 IPR004017 Cysteine-rich domain CYCME_RS02130 df8272650a33c426f96f21b8e6c477bd 319 Pfam PF02754 Cysteine-rich domain 211 294 1.7E-9 T 23-04-2016 IPR004017 Cysteine-rich domain CYCME_RS02130 df8272650a33c426f96f21b8e6c477bd 319 PANTHER PTHR32479 1 303 8.6E-40 T 23-04-2016 CYCME_RS07595 732d942e446f35e98265dd84f44d8451 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07595 732d942e446f35e98265dd84f44d8451 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 232 28.61 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07595 732d942e446f35e98265dd84f44d8451 238 PANTHER PTHR32125:SF4 1 235 2.1E-63 T 23-04-2016 CYCME_RS07595 732d942e446f35e98265dd84f44d8451 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 231 9.1E-64 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07595 732d942e446f35e98265dd84f44d8451 238 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 228 2.4E-63 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07595 732d942e446f35e98265dd84f44d8451 238 SUPERFAMILY SSF53448 7 230 3.68E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07595 732d942e446f35e98265dd84f44d8451 238 PANTHER PTHR32125 1 235 2.1E-63 T 23-04-2016 CYCME_RS07595 732d942e446f35e98265dd84f44d8451 238 Gene3D G3DSA:3.90.550.10 4 234 3.2E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07900 8f8cd3e820b02e16cb0de2d72f925b0a 791 SUPERFAMILY SSF82866 630 784 1.29E-27 T 23-04-2016 CYCME_RS07900 8f8cd3e820b02e16cb0de2d72f925b0a 791 Gene3D G3DSA:1.20.1640.10 191 373 6.2E-19 T 23-04-2016 CYCME_RS07900 8f8cd3e820b02e16cb0de2d72f925b0a 791 Gene3D G3DSA:1.20.1640.10 577 784 3.8E-25 T 23-04-2016 CYCME_RS07900 8f8cd3e820b02e16cb0de2d72f925b0a 791 PANTHER PTHR33406 8 93 9.3E-28 T 23-04-2016 CYCME_RS07900 8f8cd3e820b02e16cb0de2d72f925b0a 791 PANTHER PTHR33406 116 776 9.3E-28 T 23-04-2016 CYCME_RS07900 8f8cd3e820b02e16cb0de2d72f925b0a 791 SUPERFAMILY SSF82866 162 371 1.15E-18 T 23-04-2016 CYCME_RS07900 8f8cd3e820b02e16cb0de2d72f925b0a 791 Pfam PF03176 MMPL family 573 776 1.8E-13 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 Gene3D G3DSA:2.40.70.10 6 137 1.8E-42 T 23-04-2016 IPR021109 Aspartic peptidase domain CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 Gene3D G3DSA:3.30.1490.20 277 339 5.9E-5 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 Gene3D G3DSA:3.30.470.20 340 441 4.2E-34 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 PANTHER PTHR21621:SF0 157 456 1.7E-109 T 23-04-2016 CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 SUPERFAMILY SSF50630 9 142 4.22E-42 T 23-04-2016 IPR021109 Aspartic peptidase domain CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 Gene3D G3DSA:3.40.50.20 172 276 1.8E-17 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 SUPERFAMILY SSF56059 263 455 6.4E-46 T 23-04-2016 CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 165 460 48.389 T 23-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 Pfam PF05618 Putative ATP-dependant zinc protease 9 140 2.4E-33 T 23-04-2016 CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 166 450 1.3E-80 T 23-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 Pfam PF08443 RimK-like ATP-grasp domain 263 451 1.6E-61 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type CYCME_RS09480 971021863262ff5289d0403bfce8c933 469 PANTHER PTHR21621 157 456 1.7E-109 T 23-04-2016 CYCME_RS06425 4402f3b7c5a1df91952992fef2acd3c1 82 SUPERFAMILY SSF54913 1 63 4.77E-10 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CYCME_RS06425 4402f3b7c5a1df91952992fef2acd3c1 82 Pfam PF00543 Nitrogen regulatory protein P-II 6 44 8.3E-5 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS06425 4402f3b7c5a1df91952992fef2acd3c1 82 Gene3D G3DSA:3.30.70.120 4 60 2.1E-7 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYCME_RS11220 c5b187150953bf455e6d654574ad60a6 226 PANTHER PTHR41536 2 226 6.2E-105 T 23-04-2016 CYCME_RS11220 c5b187150953bf455e6d654574ad60a6 226 SUPERFAMILY SSF51197 5 168 1.13E-5 T 23-04-2016 CYCME_RS11220 c5b187150953bf455e6d654574ad60a6 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 83 175 4.6E-15 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CYCME_RS11220 c5b187150953bf455e6d654574ad60a6 226 SMART SM00702 1 176 1.8E-16 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CYCME_RS11220 c5b187150953bf455e6d654574ad60a6 226 PANTHER PTHR41536:SF1 2 226 6.2E-105 T 23-04-2016 CYCME_RS11220 c5b187150953bf455e6d654574ad60a6 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 43.882 T 23-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 PANTHER PTHR30560:SF3 1 430 1.3E-102 T 23-04-2016 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 SUPERFAMILY SSF102735 1 130 3.4E-35 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 SUPERFAMILY SSF54534 101 241 1.71E-26 T 23-04-2016 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 PIRSF PIRSF003095 1 434 1.3E-113 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 PANTHER PTHR30560 1 430 1.3E-102 T 23-04-2016 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 SUPERFAMILY SSF109998 248 429 7.46E-45 T 23-04-2016 IPR027304 Trigger factor/SurA domain CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 Gene3D G3DSA:3.10.50.40 142 214 1.2E-8 T 23-04-2016 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 1.7E-38 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 413 6.2E-36 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 Hamap MF_00303 Trigger factor [tig]. 1 418 19.837 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 TIGRFAM TIGR00115 tig: trigger factor 12 412 5.2E-127 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 Gene3D G3DSA:1.10.3120.10 215 388 9.3E-53 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 155 235 2.3E-11 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CYCME_RS08095 be851f42ca3c9df0c7e0d6cf8ac93cb6 435 Gene3D G3DSA:3.30.70.1050 1 116 2.4E-35 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CYCME_RS02300 2d9dd09b6d03888847f7cb5ba317c2fd 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 2.6E-63 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 CYCME_RS02300 2d9dd09b6d03888847f7cb5ba317c2fd 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CYCME_RS02300 2d9dd09b6d03888847f7cb5ba317c2fd 142 PANTHER PTHR11545 1 142 2.5E-75 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CYCME_RS02300 2d9dd09b6d03888847f7cb5ba317c2fd 142 SUPERFAMILY SSF52161 1 139 6.54E-60 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CYCME_RS02300 2d9dd09b6d03888847f7cb5ba317c2fd 142 Gene3D G3DSA:3.90.1180.10 3 141 3.3E-64 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CYCME_RS02300 2d9dd09b6d03888847f7cb5ba317c2fd 142 Pfam PF00572 Ribosomal protein L13 15 138 9.2E-58 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CYCME_RS02300 2d9dd09b6d03888847f7cb5ba317c2fd 142 PIRSF PIRSF002181 1 141 7.1E-51 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CYCME_RS02300 2d9dd09b6d03888847f7cb5ba317c2fd 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.382 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CYCME_RS06060 110d85aaa3fc118a3be07ee56d314659 142 SUPERFAMILY SSF54637 17 140 1.01E-20 T 23-04-2016 IPR029069 HotDog domain CYCME_RS06060 110d85aaa3fc118a3be07ee56d314659 142 Pfam PF13452 N-terminal half of MaoC dehydratase 23 130 4.4E-14 T 23-04-2016 CYCME_RS06060 110d85aaa3fc118a3be07ee56d314659 142 Gene3D G3DSA:3.10.129.10 13 135 8.1E-21 T 23-04-2016 IPR029069 HotDog domain CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 Gene3D G3DSA:3.30.460.10 643 815 1.1E-52 T 23-04-2016 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 Gene3D G3DSA:3.30.460.10 125 296 1.4E-59 T 23-04-2016 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 SUPERFAMILY SSF81593 298 447 1.57E-39 T 23-04-2016 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 40 950 17.924 T 23-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 810 4.4E-77 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 47 286 1.3E-77 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 Pfam PF08335 GlnD PII-uridylyltransferase 309 446 5.7E-42 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 Pfam PF08335 GlnD PII-uridylyltransferase 832 918 5.7E-8 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 SUPERFAMILY SSF81301 532 819 3.27E-73 T 23-04-2016 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 PANTHER PTHR30621 17 951 6.0E-284 T 23-04-2016 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 SUPERFAMILY SSF81593 820 948 2.28E-26 T 23-04-2016 CYCME_RS03305 b07eaa084482a614a7a1d908428e3ae6 951 SUPERFAMILY SSF81301 30 297 3.6E-75 T 23-04-2016 CYCME_RS11990 30a207d8e2cac36c5d7585e026f93174 331 Gene3D G3DSA:1.10.3290.10 245 298 1.0E-6 T 23-04-2016 IPR003812 Fido domain CYCME_RS11990 30a207d8e2cac36c5d7585e026f93174 331 PANTHER PTHR35810:SF2 1 331 2.6E-123 T 23-04-2016 CYCME_RS11990 30a207d8e2cac36c5d7585e026f93174 331 Pfam PF02661 Fic/DOC family 232 280 2.7E-9 T 23-04-2016 IPR003812 Fido domain CYCME_RS11990 30a207d8e2cac36c5d7585e026f93174 331 PANTHER PTHR35810 1 331 2.6E-123 T 23-04-2016 CYCME_RS11990 30a207d8e2cac36c5d7585e026f93174 331 SUPERFAMILY SSF140931 246 314 3.14E-8 T 23-04-2016 IPR003812 Fido domain CYCME_RS11990 30a207d8e2cac36c5d7585e026f93174 331 Pfam PF13310 Virulence protein RhuM family 61 134 1.6E-26 T 23-04-2016 IPR011204 Virulence protein RhuM-like CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 SUPERFAMILY SSF47917 383 511 2.88E-41 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 PANTHER PTHR15184:SF3 1 496 1.2E-286 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 SUPERFAMILY SSF50615 10 94 1.15E-29 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.7E-41 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 SUPERFAMILY SSF52540 96 381 2.27E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 512 2.1E-246 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 Gene3D G3DSA:2.40.30.20 1 93 1.3E-34 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 PANTHER PTHR15184 1 496 1.2E-286 T 23-04-2016 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.4E-73 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 Gene3D G3DSA:3.40.50.300 94 382 2.4E-112 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 Gene3D G3DSA:1.20.150.20 383 510 5.8E-45 T 23-04-2016 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.704 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 4.1E-16 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12295 901a5f61aa77bc333c68449cd63bbe05 513 PIRSF PIRSF039088 1 513 4.3E-235 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 PRINTS PR01591 DNA-binding protein FIS signature 25 40 4.2E-11 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 PRINTS PR01591 DNA-binding protein FIS signature 40 52 4.2E-11 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 PRINTS PR01591 DNA-binding protein FIS signature 9 25 4.2E-11 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 PIRSF PIRSF002097 1 81 3.1E-33 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 Pfam PF02954 Bacterial regulatory protein, Fis family 39 78 1.5E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 PANTHER PTHR32071 14 82 2.6E-19 T 23-04-2016 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 81 2.5E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 44 61 2.5E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 SUPERFAMILY SSF46689 4 81 4.18E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS02915 341af727f5ff3201cfd714deb5e1f9f7 82 Gene3D G3DSA:1.10.10.60 12 81 1.2E-23 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.307 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 Gene3D G3DSA:4.10.910.10 72 118 3.3E-25 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 PIRSF PIRSF002134 1 118 5.9E-43 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.3E-31 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 Gene3D G3DSA:1.10.8.50 1 71 8.5E-30 T 23-04-2016 CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.1E-53 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 PANTHER PTHR10871 1 118 1.3E-64 T 23-04-2016 CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS03760 92d8ff68ae12ee675391b0ccf21e6172 118 SUPERFAMILY SSF46946 2 114 2.19E-46 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 SUPERFAMILY SSF47446 298 431 9.94E-43 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 Gene3D G3DSA:3.40.50.300 94 297 2.7E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.6E-173 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.1E-21 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 SMART SM00962 100 296 3.1E-115 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 Gene3D G3DSA:1.20.120.140 2 88 3.1E-35 T 23-04-2016 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 Gene3D G3DSA:1.10.260.30 329 432 1.7E-36 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 SMART SM00382 99 247 4.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 PANTHER PTHR11564 1 435 3.8E-255 T 23-04-2016 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 PANTHER PTHR11564:SF7 1 435 3.8E-255 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.329 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 SUPERFAMILY SSF52540 42 352 2.45E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 SMART SM00963 1 86 1.7E-35 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 Pfam PF02978 Signal peptide binding domain 329 427 2.3E-29 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CYCME_RS08390 b826a4ce5cb4965cac6c02246f437aa8 455 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.8E-74 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 SUPERFAMILY SSF46600 616 662 1.09E-10 T 23-04-2016 IPR001943 UVR domain GO:0005515 CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 PANTHER PTHR24029 1 664 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 SUPERFAMILY SSF52540 3 414 5.73E-136 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Pfam PF12344 Ultra-violet resistance protein B 551 592 1.1E-21 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Pfam PF00271 Helicase conserved C-terminal domain 432 544 3.7E-18 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Gene3D G3DSA:3.30.2060.10 159 234 1.5E-9 T 23-04-2016 CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 659 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 SMART SM00490 459 545 7.8E-19 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 661 43.272 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 SMART SM00487 9 424 2.6E-26 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Gene3D G3DSA:3.40.50.300 418 581 1.7E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 SUPERFAMILY SSF52540 34 80 3.07E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 SUPERFAMILY SSF52540 469 591 3.07E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 9.8E-10 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Gene3D G3DSA:3.40.50.300 6 89 7.0E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Gene3D G3DSA:3.40.50.300 388 409 7.0E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Gene3D G3DSA:3.40.50.300 278 338 7.0E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Pfam PF02151 UvrB/uvrC motif 627 661 3.0E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 CYCME_RS08835 a89c9c64782a57b054609bc7bf1f0bcb 666 Gene3D G3DSA:4.10.860.10 621 662 3.0E-16 T 23-04-2016 IPR001943 UVR domain GO:0005515 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 49.997 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 PANTHER PTHR22855:SF42 1 319 3.9E-127 T 23-04-2016 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 SUPERFAMILY SSF52096 5 316 6.4E-103 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 5.6E-153 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 PANTHER PTHR22855 1 319 3.9E-127 T 23-04-2016 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 4.1E-49 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 4.1E-49 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 4.1E-49 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 4.1E-49 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 4.1E-49 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 4.1E-49 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 Gene3D G3DSA:3.90.226.10 60 279 4.2E-52 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS07625 8c8ebd07818c0211e377434e5d27c164 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.5E-64 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 11 423 8.2E-131 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 Gene3D G3DSA:3.65.10.10 229 425 2.7E-54 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 PANTHER PTHR21090:SF5 6 427 1.5E-177 T 23-04-2016 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 PIRSF PIRSF000505 1 430 1.1E-123 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 Gene3D G3DSA:3.65.10.10 19 228 4.7E-61 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 PANTHER PTHR21090 6 427 1.5E-177 T 23-04-2016 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 418 1.3E-121 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 SUPERFAMILY SSF55205 8 425 1.96E-130 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CYCME_RS09265 05d879e1487672109c7f515ecc4b7861 430 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 7 426 34.129 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 SUPERFAMILY SSF81333 4 75 3.92E-16 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 Pfam PF00137 ATP synthase subunit C 9 72 2.6E-7 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 75 13.646 T 23-04-2016 CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 PRINTS PR00124 ATP synthase C subunit signature 31 46 8.6E-9 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 PRINTS PR00124 ATP synthase C subunit signature 48 73 8.6E-9 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 PRINTS PR00124 ATP synthase C subunit signature 10 29 8.6E-9 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 75 6.4E-27 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CYCME_RS12310 f4afe649f266471875416e4ffdedfbc0 78 Gene3D G3DSA:1.20.20.10 4 75 1.4E-28 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CYCME_RS12605 1b0648dfef29106ef3f7978ed9699e88 171 PANTHER PTHR11795 1 171 2.9E-78 T 23-04-2016 CYCME_RS12605 1b0648dfef29106ef3f7978ed9699e88 171 Pfam PF02653 Branched-chain amino acid transport system / permease component 1 171 8.3E-30 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CYCME_RS12605 1b0648dfef29106ef3f7978ed9699e88 171 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 1 171 1.5E-76 T 23-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CYCME_RS12605 1b0648dfef29106ef3f7978ed9699e88 171 PANTHER PTHR11795:SF349 1 171 2.9E-78 T 23-04-2016 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 SUPERFAMILY SSF51735 2 144 6.09E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 157 292 2.2E-53 T 23-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Pfam PF13549 ATP-grasp domain 483 705 5.5E-88 T 23-04-2016 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Gene3D G3DSA:3.40.50.261 137 292 1.2E-35 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 SUPERFAMILY SSF56059 492 706 3.91E-42 T 23-04-2016 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 SUPERFAMILY SSF55729 733 882 1.1E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 SUPERFAMILY SSF52210 303 457 4.45E-38 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Gene3D G3DSA:3.40.50.720 1 136 9.8E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Pfam PF13380 CoA binding domain 14 140 6.9E-20 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Pfam PF13302 Acetyltransferase (GNAT) domain 738 876 9.4E-6 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Gene3D G3DSA:3.30.470.20 496 534 1.9E-6 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Gene3D G3DSA:3.40.630.30 730 890 1.1E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 PANTHER PTHR11117:SF8 1 710 6.3E-287 T 23-04-2016 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 PANTHER PTHR11117 1 710 6.3E-287 T 23-04-2016 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 SMART SM00881 9 105 1.9E-22 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 SUPERFAMILY SSF52210 137 295 7.33E-46 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS04255 69337fb1f2c72dc3f93cf6e0d814118f 900 Gene3D G3DSA:3.40.50.261 304 449 2.2E-18 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 SUPERFAMILY SSF52343 202 339 1.7E-28 T 23-04-2016 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 SUPERFAMILY SSF54292 3 90 7.08E-25 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 306 314 4.3E-16 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 4.3E-16 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 193 202 4.3E-16 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 4.3E-16 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 4.3E-16 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 Pfam PF00970 Oxidoreductase FAD-binding domain 107 198 2.9E-15 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 83 6.2E-18 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 Gene3D G3DSA:3.10.20.30 2 91 2.0E-25 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 PANTHER PTHR19370 34 339 3.0E-47 T 23-04-2016 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 Gene3D G3DSA:3.40.50.80 190 335 1.3E-27 T 23-04-2016 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 Gene3D G3DSA:2.40.30.10 106 189 3.2E-21 T 23-04-2016 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 PANTHER PTHR19370:SF32 34 339 3.0E-47 T 23-04-2016 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 SUPERFAMILY SSF63380 107 199 2.33E-22 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CYCME_RS12365 c9e5a7ea5eeef84c6841f930a58432a3 340 Pfam PF00175 Oxidoreductase NAD-binding domain 211 318 3.9E-14 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 SUPERFAMILY SSF53271 71 306 1.51E-64 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 Gene3D G3DSA:3.40.50.2020 162 290 1.1E-49 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 PANTHER PTHR10210 3 315 6.8E-174 T 23-04-2016 CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 3.6E-47 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 PANTHER PTHR10210:SF41 3 315 6.8E-174 T 23-04-2016 CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 316 48.203 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 315 1.3E-117 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 315 7.4E-28 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 Gene3D G3DSA:3.40.50.2020 4 161 1.3E-72 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS03550 cd9450b91f0d3a7e5d5d618fdbb324a8 317 SMART SM01400 6 123 2.8E-73 T 23-04-2016 CYCME_RS02245 e4f495ddfff71c17ba9c05e09eed81dd 399 PIRSF PIRSF000390 14 386 5.6E-83 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CYCME_RS02245 e4f495ddfff71c17ba9c05e09eed81dd 399 SUPERFAMILY SSF53383 19 382 7.16E-76 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS02245 e4f495ddfff71c17ba9c05e09eed81dd 399 Gene3D G3DSA:3.90.1150.10 264 382 4.0E-18 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS02245 e4f495ddfff71c17ba9c05e09eed81dd 399 Gene3D G3DSA:3.40.640.10 35 254 1.2E-52 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS02245 e4f495ddfff71c17ba9c05e09eed81dd 399 PANTHER PTHR30244:SF9 13 387 7.7E-99 T 23-04-2016 CYCME_RS02245 e4f495ddfff71c17ba9c05e09eed81dd 399 PANTHER PTHR30244 13 387 7.7E-99 T 23-04-2016 CYCME_RS02245 e4f495ddfff71c17ba9c05e09eed81dd 399 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 39 378 6.9E-80 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.5E-26 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 2.5E-26 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 2.5E-26 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 2.5E-26 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PANTHER PTHR20854 1 262 1.2E-97 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 6.2E-57 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 6.2E-57 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 6.2E-57 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.2E-57 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.2E-57 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 6.2E-57 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 SUPERFAMILY SSF56655 1 260 1.1E-84 T 23-04-2016 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 PANTHER PTHR20854:SF4 1 262 1.2E-97 T 23-04-2016 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 Gene3D G3DSA:3.30.540.10 2 156 1.3E-48 T 23-04-2016 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 Gene3D G3DSA:3.40.190.80 157 256 1.2E-37 T 23-04-2016 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 Pfam PF00459 Inositol monophosphatase family 2 256 2.5E-65 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS05705 362bb6b8be37bdee55519aae32c6dbd4 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 6 215 7.4E-107 T 23-04-2016 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 Gene3D G3DSA:3.20.20.70 32 105 8.4E-16 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 PANTHER PTHR11228 1 211 1.0E-51 T 23-04-2016 CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 SUPERFAMILY SSF102114 28 105 8.24E-17 T 23-04-2016 CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 Pfam PF13394 4Fe-4S single cluster domain 28 109 2.9E-10 T 23-04-2016 CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 PIRSF PIRSF000370 4 215 2.9E-69 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 Pfam PF04055 Radical SAM superfamily 30 116 7.8E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 6 212 36.871 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CYCME_RS10525 d177fa1fa71101924ca2e4956800ecdd 215 PANTHER PTHR11228:SF6 1 211 1.0E-51 T 23-04-2016 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 Pfam PF00654 Voltage gated chloride channel 66 406 5.6E-69 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 SUPERFAMILY SSF81340 7 419 3.27E-76 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 Gene3D G3DSA:1.10.3080.10 13 419 1.1E-61 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 PANTHER PTHR11689 27 402 5.1E-27 T 23-04-2016 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 PRINTS PR00762 Chloride channel signature 112 131 2.5E-23 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 PRINTS PR00762 Chloride channel signature 374 393 2.5E-23 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 PRINTS PR00762 Chloride channel signature 327 347 2.5E-23 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 PRINTS PR00762 Chloride channel signature 78 95 2.5E-23 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 CYCME_RS11785 11cd4d8387c77f45573f5c4315d0b2f1 430 PRINTS PR00762 Chloride channel signature 164 183 2.5E-23 T 23-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 CYCME_RS11980 a4f3d7eb3d21845c1097fd9766dfe606 474 Pfam PF14082 Domain of unknown function (DUF4263) 288 447 9.6E-30 T 23-04-2016 IPR025359 Protein of unknown function DUF4263 CYCME_RS09005 78b4f7cf54ed59ad20c5d4e2739fc0d4 211 Pfam PF01300 Telomere recombination 23 198 2.3E-40 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CYCME_RS09005 78b4f7cf54ed59ad20c5d4e2739fc0d4 211 Gene3D G3DSA:3.90.870.10 3 202 9.3E-56 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CYCME_RS09005 78b4f7cf54ed59ad20c5d4e2739fc0d4 211 PANTHER PTHR17490 1 210 1.3E-80 T 23-04-2016 CYCME_RS09005 78b4f7cf54ed59ad20c5d4e2739fc0d4 211 PANTHER PTHR17490:SF7 1 210 1.3E-80 T 23-04-2016 CYCME_RS09005 78b4f7cf54ed59ad20c5d4e2739fc0d4 211 SUPERFAMILY SSF55821 1 204 9.46E-59 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CYCME_RS09005 78b4f7cf54ed59ad20c5d4e2739fc0d4 211 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 3.4E-58 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CYCME_RS00335 8b361a142d5ef2ff27d2cda48613f0ef 83 PANTHER PTHR36417 2 80 4.9E-28 T 23-04-2016 CYCME_RS00335 8b361a142d5ef2ff27d2cda48613f0ef 83 Pfam PF10262 Rdx family 2 66 2.7E-22 T 23-04-2016 IPR011893 Selenoprotein, Rdx type CYCME_RS00335 8b361a142d5ef2ff27d2cda48613f0ef 83 PANTHER PTHR36417:SF2 2 80 4.9E-28 T 23-04-2016 CYCME_RS00335 8b361a142d5ef2ff27d2cda48613f0ef 83 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 3 66 1.2E-14 T 23-04-2016 IPR011893 Selenoprotein, Rdx type CYCME_RS00335 8b361a142d5ef2ff27d2cda48613f0ef 83 Gene3D G3DSA:3.40.30.10 1 80 1.5E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS00335 8b361a142d5ef2ff27d2cda48613f0ef 83 SUPERFAMILY SSF52833 2 75 1.01E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS05525 3817f77c8f6bfbefe252613c6fc06444 403 PANTHER PTHR23547:SF1 1 401 3.1E-155 T 23-04-2016 CYCME_RS05525 3817f77c8f6bfbefe252613c6fc06444 403 PANTHER PTHR23547 1 401 3.1E-155 T 23-04-2016 CYCME_RS05525 3817f77c8f6bfbefe252613c6fc06444 403 SUPERFAMILY SSF103473 14 399 6.41E-31 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS05525 3817f77c8f6bfbefe252613c6fc06444 403 Pfam PF07690 Major Facilitator Superfamily 31 276 8.4E-16 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CYCME_RS05525 3817f77c8f6bfbefe252613c6fc06444 403 Gene3D G3DSA:1.20.1250.20 225 401 8.7E-13 T 23-04-2016 CYCME_RS05525 3817f77c8f6bfbefe252613c6fc06444 403 Gene3D G3DSA:1.20.1250.20 15 199 1.1E-14 T 23-04-2016 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PANTHER PTHR13789:SF225 191 463 4.6E-44 T 23-04-2016 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PANTHER PTHR13789:SF225 1 170 4.6E-44 T 23-04-2016 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PANTHER PTHR13789 191 463 4.6E-44 T 23-04-2016 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PANTHER PTHR13789 1 170 4.6E-44 T 23-04-2016 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 Pfam PF02254 TrkA-N domain 3 125 1.0E-26 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 Pfam PF02254 TrkA-N domain 236 350 1.2E-20 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 Pfam PF02080 TrkA-C domain 163 224 4.6E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 Pfam PF02080 TrkA-C domain 393 451 1.7E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 SUPERFAMILY SSF116726 137 223 6.67E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.6E-22 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.6E-22 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.6E-22 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.6E-22 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.6E-22 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 SUPERFAMILY SSF51735 1 151 5.46E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 SUPERFAMILY SSF116726 363 444 2.88E-7 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 SUPERFAMILY SSF51735 233 376 1.16E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 Gene3D G3DSA:3.30.70.1450 392 443 3.9E-4 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 Gene3D G3DSA:3.30.70.1450 154 223 2.0E-5 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 Gene3D G3DSA:3.40.50.720 233 377 1.8E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01560 70283e832994a6cd0f4f845d65bb8add 463 Gene3D G3DSA:3.40.50.720 1 151 2.0E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 Gene3D G3DSA:3.90.25.10 256 325 2.4E-37 T 23-04-2016 CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 Gene3D G3DSA:3.90.25.10 173 221 2.4E-37 T 23-04-2016 CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 PANTHER PTHR10366 5 324 4.9E-103 T 23-04-2016 CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 SUPERFAMILY SSF51735 1 324 3.31E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 6 325 2.2E-138 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 Gene3D G3DSA:3.90.25.10 222 245 8.5E-4 T 23-04-2016 CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 Gene3D G3DSA:3.40.50.720 2 172 1.7E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 254 1.1E-54 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CYCME_RS04720 93b0703b6e159baf80518ee6d7344bd2 330 PANTHER PTHR10366:SF39 5 324 4.9E-103 T 23-04-2016 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 PANTHER PTHR11749 2 222 7.3E-145 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 SUPERFAMILY SSF51366 4 217 1.31E-74 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 5.7E-91 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.2E-96 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 PANTHER PTHR11749:SF7 2 222 7.3E-145 T 23-04-2016 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 Gene3D G3DSA:3.20.20.70 1 221 2.2E-94 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CYCME_RS02075 db0c8f4edc62c8a45ae2da486ace40a5 224 PIRSF PIRSF001461 1 224 7.1E-104 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 PANTHER PTHR11986 9 387 5.1E-159 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 212 249 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 SUPERFAMILY SSF53383 2 383 1.97E-120 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 383 3.9E-141 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 2 386 42.618 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 Gene3D G3DSA:3.40.640.10 49 294 1.5E-85 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 PANTHER PTHR11986:SF79 9 387 5.1E-159 T 23-04-2016 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 Pfam PF00202 Aminotransferase class-III 12 384 2.0E-114 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 Gene3D G3DSA:3.90.1150.10 3 48 2.5E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS11605 973edd327b10bcf1b86525190c88e5fa 388 Gene3D G3DSA:3.90.1150.10 296 385 2.5E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS06975 6af6d57c46b75ab43fcf1ca021a3336f 274 Pfam PF13276 HTH-like domain 35 90 2.3E-10 T 23-04-2016 IPR025948 HTH-like domain CYCME_RS06975 6af6d57c46b75ab43fcf1ca021a3336f 274 Gene3D G3DSA:3.30.420.10 106 260 1.5E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS06975 6af6d57c46b75ab43fcf1ca021a3336f 274 PANTHER PTHR32552 13 263 2.3E-32 T 23-04-2016 CYCME_RS06975 6af6d57c46b75ab43fcf1ca021a3336f 274 SUPERFAMILY SSF53098 110 266 5.92E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS06975 6af6d57c46b75ab43fcf1ca021a3336f 274 Pfam PF00665 Integrase core domain 111 222 3.1E-27 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS08515 6af6d57c46b75ab43fcf1ca021a3336f 274 Pfam PF13276 HTH-like domain 35 90 2.3E-10 T 23-04-2016 IPR025948 HTH-like domain CYCME_RS08515 6af6d57c46b75ab43fcf1ca021a3336f 274 Gene3D G3DSA:3.30.420.10 106 260 1.5E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS08515 6af6d57c46b75ab43fcf1ca021a3336f 274 PANTHER PTHR32552 13 263 2.3E-32 T 23-04-2016 CYCME_RS08515 6af6d57c46b75ab43fcf1ca021a3336f 274 SUPERFAMILY SSF53098 110 266 5.92E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS08515 6af6d57c46b75ab43fcf1ca021a3336f 274 Pfam PF00665 Integrase core domain 111 222 3.1E-27 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS08245 6af6d57c46b75ab43fcf1ca021a3336f 274 Pfam PF13276 HTH-like domain 35 90 2.3E-10 T 23-04-2016 IPR025948 HTH-like domain CYCME_RS08245 6af6d57c46b75ab43fcf1ca021a3336f 274 Gene3D G3DSA:3.30.420.10 106 260 1.5E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS08245 6af6d57c46b75ab43fcf1ca021a3336f 274 PANTHER PTHR32552 13 263 2.3E-32 T 23-04-2016 CYCME_RS08245 6af6d57c46b75ab43fcf1ca021a3336f 274 SUPERFAMILY SSF53098 110 266 5.92E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS08245 6af6d57c46b75ab43fcf1ca021a3336f 274 Pfam PF00665 Integrase core domain 111 222 3.1E-27 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS09210 6af6d57c46b75ab43fcf1ca021a3336f 274 Pfam PF13276 HTH-like domain 35 90 2.3E-10 T 23-04-2016 IPR025948 HTH-like domain CYCME_RS09210 6af6d57c46b75ab43fcf1ca021a3336f 274 Gene3D G3DSA:3.30.420.10 106 260 1.5E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS09210 6af6d57c46b75ab43fcf1ca021a3336f 274 PANTHER PTHR32552 13 263 2.3E-32 T 23-04-2016 CYCME_RS09210 6af6d57c46b75ab43fcf1ca021a3336f 274 SUPERFAMILY SSF53098 110 266 5.92E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS09210 6af6d57c46b75ab43fcf1ca021a3336f 274 Pfam PF00665 Integrase core domain 111 222 3.1E-27 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 PANTHER PTHR10909:SF316 11 376 8.5E-28 T 23-04-2016 CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 SUPERFAMILY SSF47203 229 366 9.9E-9 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 PANTHER PTHR10909 11 376 8.5E-28 T 23-04-2016 CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 SUPERFAMILY SSF56645 15 203 1.96E-24 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 Gene3D G3DSA:1.10.540.10 5 107 1.3E-17 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 Gene3D G3DSA:1.20.140.10 197 384 1.2E-31 T 23-04-2016 CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 PIRSF PIRSF016578 3 388 3.8E-72 T 23-04-2016 CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 236 365 4.6E-13 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CYCME_RS10295 278edb780336952e8c662c19061c5fe4 389 Gene3D G3DSA:2.40.110.10 113 196 2.0E-24 T 23-04-2016 CYCME_RS00375 65d5685bdfff6a94d3bcecb26637dd90 345 Gene3D G3DSA:3.40.50.300 100 338 8.5E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00375 65d5685bdfff6a94d3bcecb26637dd90 345 SMART SM00382 122 247 0.0076 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00375 65d5685bdfff6a94d3bcecb26637dd90 345 SUPERFAMILY SSF52540 4 334 2.2E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00375 65d5685bdfff6a94d3bcecb26637dd90 345 PANTHER PTHR30486:SF6 1 345 4.9E-189 T 23-04-2016 CYCME_RS00375 65d5685bdfff6a94d3bcecb26637dd90 345 PANTHER PTHR30486 1 345 4.9E-189 T 23-04-2016 CYCME_RS00375 65d5685bdfff6a94d3bcecb26637dd90 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CYCME_RS00375 65d5685bdfff6a94d3bcecb26637dd90 345 Pfam PF00437 Type II/IV secretion system protein 11 270 2.3E-45 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CYCME_RS00375 65d5685bdfff6a94d3bcecb26637dd90 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 3.2E-150 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 SUPERFAMILY SSF54713 55 147 2.09E-17 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 Gene3D G3DSA:3.30.479.20 56 147 1.8E-14 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 Gene3D G3DSA:1.10.286.20 196 237 7.7E-18 T 23-04-2016 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 SUPERFAMILY SSF46934 1 55 3.7E-18 T 23-04-2016 IPR009060 UBA-like GO:0005515 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 80.255 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 PANTHER PTHR11741 1 294 6.2E-137 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 SUPERFAMILY SSF54713 152 292 1.28E-55 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 Gene3D G3DSA:3.30.479.20 153 189 8.6E-32 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 Gene3D G3DSA:3.30.479.20 238 273 8.6E-32 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 Gene3D G3DSA:1.10.8.10 1 54 1.6E-26 T 23-04-2016 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 292 7.2E-105 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 CYCME_RS07700 e3a8bb3cac0513f236787d74a25fd3c8 294 Pfam PF00889 Elongation factor TS 73 274 3.0E-73 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CYCME_RS09650 2f1ae99663023a31d7f79b5efd13d387 367 PANTHER PTHR30438 1 367 4.9E-116 T 23-04-2016 CYCME_RS09650 2f1ae99663023a31d7f79b5efd13d387 367 SUPERFAMILY SSF111369 180 298 8.76E-7 T 23-04-2016 CYCME_RS09650 2f1ae99663023a31d7f79b5efd13d387 367 Pfam PF13533 Biotin-lipoyl like 60 106 2.7E-8 T 23-04-2016 CYCME_RS09650 2f1ae99663023a31d7f79b5efd13d387 367 Pfam PF13437 HlyD family secretion protein 225 330 1.8E-11 T 23-04-2016 CYCME_RS09650 2f1ae99663023a31d7f79b5efd13d387 367 Gene3D G3DSA:2.40.50.100 60 92 9.4E-12 T 23-04-2016 CYCME_RS09650 2f1ae99663023a31d7f79b5efd13d387 367 Gene3D G3DSA:2.40.50.100 223 255 9.4E-12 T 23-04-2016 CYCME_RS09650 2f1ae99663023a31d7f79b5efd13d387 367 SUPERFAMILY SSF111369 53 122 1.01E-7 T 23-04-2016 CYCME_RS09650 2f1ae99663023a31d7f79b5efd13d387 367 PANTHER PTHR30438:SF1 1 367 4.9E-116 T 23-04-2016 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 Pfam PF01416 tRNA pseudouridine synthase 145 246 2.0E-28 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 Pfam PF01416 tRNA pseudouridine synthase 9 105 7.0E-8 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 34.293 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 PIRSF PIRSF001430 1 260 2.8E-76 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 SUPERFAMILY SSF55120 1 249 8.06E-89 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 7.6E-70 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 PANTHER PTHR11142 1 268 6.9E-89 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 Gene3D G3DSA:3.30.70.660 108 243 6.7E-42 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07360 88a0db17cce2fa92b8d99ae914b02ed3 269 Gene3D G3DSA:3.30.70.580 1 106 9.4E-40 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS00670 f8cc3d5b358ce71a02c4f562133339d6 287 SMART SM01321 9 123 5.1E-37 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00670 f8cc3d5b358ce71a02c4f562133339d6 287 PANTHER PTHR34322 2 211 3.0E-34 T 23-04-2016 CYCME_RS00670 f8cc3d5b358ce71a02c4f562133339d6 287 Pfam PF01797 Transposase IS200 like 13 120 2.4E-10 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00670 f8cc3d5b358ce71a02c4f562133339d6 287 Gene3D G3DSA:1.10.260.40 259 279 0.001 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CYCME_RS00670 f8cc3d5b358ce71a02c4f562133339d6 287 SUPERFAMILY SSF143422 1 129 2.22E-24 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00670 f8cc3d5b358ce71a02c4f562133339d6 287 Gene3D G3DSA:3.30.70.1290 13 125 1.8E-12 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00670 f8cc3d5b358ce71a02c4f562133339d6 287 PANTHER PTHR34322:SF1 2 211 3.0E-34 T 23-04-2016 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 PANTHER PTHR24423 65 385 4.0E-58 T 23-04-2016 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 PANTHER PTHR24423 25 38 4.0E-58 T 23-04-2016 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 Gene3D G3DSA:3.30.565.10 228 383 5.2E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 236 5.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 SMART SM00388 173 239 2.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 Gene3D G3DSA:1.10.287.130 168 227 8.3E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 381 8.7E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 SMART SM00387 277 384 2.2E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 SUPERFAMILY SSF47384 163 235 2.35E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 SUPERFAMILY SSF55874 229 387 2.1E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 8.8E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 362 8.8E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 381 8.8E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS09120 ece59ff1deb7e7e9085fb00ca9c8c5f5 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 8.8E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS08930 41bce3d81bbb8042ca450912f10619a9 470 SUPERFAMILY SSF81442 6 460 7.46E-120 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS08930 41bce3d81bbb8042ca450912f10619a9 470 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 200 255 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS08930 41bce3d81bbb8042ca450912f10619a9 470 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 10 440 1.8E-111 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS08930 41bce3d81bbb8042ca450912f10619a9 470 PANTHER PTHR10422 6 457 1.6E-282 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS08930 41bce3d81bbb8042ca450912f10619a9 470 PANTHER PTHR10422:SF21 6 457 1.6E-282 T 23-04-2016 CYCME_RS08930 41bce3d81bbb8042ca450912f10619a9 470 Gene3D G3DSA:1.20.210.10 7 459 1.2E-67 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS08930 41bce3d81bbb8042ca450912f10619a9 470 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 6 461 3.2E-228 T 23-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS06275 ad94724b0df3982a74701835b58593a9 304 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 167 284 5.1E-38 T 23-04-2016 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain CYCME_RS06275 ad94724b0df3982a74701835b58593a9 304 PIRSF PIRSF032620 3 304 2.2E-70 T 23-04-2016 IPR014571 Uncharacterised conserved protein UCP032620 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 Gene3D G3DSA:1.10.45.10 473 521 2.1E-23 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 Gene3D G3DSA:3.30.43.10 3 112 5.9E-27 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 Pfam PF02913 FAD linked oxidases, C-terminal domain 331 510 5.5E-25 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 SUPERFAMILY SSF55103 241 518 2.83E-41 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 PANTHER PTHR11748:SF92 4 515 3.6E-94 T 23-04-2016 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 Gene3D G3DSA:3.40.462.10 241 471 2.1E-79 T 23-04-2016 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain KEGG: 00908+1.5.99.12 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 Gene3D G3DSA:3.30.465.10 113 238 4.6E-35 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 Pfam PF01565 FAD binding domain 55 194 5.0E-31 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 PANTHER PTHR11748 4 515 3.6E-94 T 23-04-2016 CYCME_RS10370 749c4dd063a950103e928379360e993f 522 SUPERFAMILY SSF56176 7 238 9.35E-51 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 Gene3D G3DSA:1.10.150.80 216 287 2.2E-10 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 TIGRFAM TIGR01388 rnd: ribonuclease D 7 365 4.1E-95 T 23-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 PANTHER PTHR12124 5 355 7.7E-58 T 23-04-2016 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 SUPERFAMILY SSF53098 2 209 1.99E-66 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 SUPERFAMILY SSF47819 302 367 1.44E-5 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 PANTHER PTHR12124:SF42 5 355 7.7E-58 T 23-04-2016 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 Gene3D G3DSA:3.30.420.10 3 179 4.0E-19 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 Pfam PF01612 3'-5' exonuclease 5 170 5.6E-39 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 SMART SM00341 210 290 6.8E-9 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 Pfam PF00570 HRDC domain 215 280 8.6E-19 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 SMART SM00474 4 171 6.4E-40 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 Hamap MF_01899 Ribonuclease D [rnd]. 4 365 37.911 T 23-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CYCME_RS11860 e2d588d19cbde805c4ab5fc7245fe61c 383 SUPERFAMILY SSF47819 192 290 3.74E-23 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CYCME_RS08280 e63332115099a9006de3ec9bb7458e62 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.2E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS08280 e63332115099a9006de3ec9bb7458e62 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.2E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS08280 e63332115099a9006de3ec9bb7458e62 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.2E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS08280 e63332115099a9006de3ec9bb7458e62 166 PANTHER PTHR33164 4 148 2.3E-23 T 23-04-2016 CYCME_RS08280 e63332115099a9006de3ec9bb7458e62 166 SMART SM00347 24 124 4.9E-19 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS08280 e63332115099a9006de3ec9bb7458e62 166 Gene3D G3DSA:1.10.10.10 3 139 5.0E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08280 e63332115099a9006de3ec9bb7458e62 166 Pfam PF01047 MarR family 31 88 3.0E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS08280 e63332115099a9006de3ec9bb7458e62 166 SUPERFAMILY SSF46785 4 141 1.46E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 SUPERFAMILY SSF55681 8 211 9.94E-65 T 23-04-2016 CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 81 134 7.0E-14 T 23-04-2016 CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 PANTHER PTHR10993 12 216 3.1E-68 T 23-04-2016 CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 PIRSF PIRSF016262 10 216 1.4E-55 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 34 208 6.5E-60 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 Pfam PF03099 Biotin/lipoate A/B protein ligase family 70 165 4.5E-8 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 Gene3D G3DSA:3.90.1550.10 12 209 2.1E-65 T 23-04-2016 CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 Hamap MF_00013 Octanoyltransferase [lipB]. 11 212 35.872 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS03435 d84995bcd9abd8b4765c49826b88ae86 223 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 77 92 - T 23-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS11485 a933326db8535ccbf5464becd7bd9322 332 PANTHER PTHR30570 1 326 1.6E-105 T 23-04-2016 CYCME_RS11485 a933326db8535ccbf5464becd7bd9322 332 SUPERFAMILY SSF53850 25 327 4.78E-80 T 23-04-2016 CYCME_RS11485 a933326db8535ccbf5464becd7bd9322 332 Gene3D G3DSA:3.40.190.10 24 164 2.8E-44 T 23-04-2016 CYCME_RS11485 a933326db8535ccbf5464becd7bd9322 332 PIRSF PIRSF002756 5 329 2.3E-96 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CYCME_RS11485 a933326db8535ccbf5464becd7bd9322 332 Pfam PF12849 PBP superfamily domain 19 301 4.5E-54 T 23-04-2016 IPR024370 PBP domain CYCME_RS11485 a933326db8535ccbf5464becd7bd9322 332 PANTHER PTHR30570:SF0 1 326 1.6E-105 T 23-04-2016 CYCME_RS11485 a933326db8535ccbf5464becd7bd9322 332 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 326 3.4E-89 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CYCME_RS11485 a933326db8535ccbf5464becd7bd9322 332 Gene3D G3DSA:3.40.190.10 175 326 3.3E-17 T 23-04-2016 CYCME_RS04830 d319ef95bbd08b25143f0b6fa9f4523a 732 Pfam PF07728 AAA domain (dynein-related subfamily) 469 624 8.7E-27 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CYCME_RS04830 d319ef95bbd08b25143f0b6fa9f4523a 732 Gene3D G3DSA:3.40.50.300 436 631 1.1E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04830 d319ef95bbd08b25143f0b6fa9f4523a 732 SUPERFAMILY SSF52540 434 653 1.29E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04830 d319ef95bbd08b25143f0b6fa9f4523a 732 SMART SM00382 466 630 2.0E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS04830 d319ef95bbd08b25143f0b6fa9f4523a 732 PANTHER PTHR37291:SF1 423 720 4.2E-38 T 23-04-2016 CYCME_RS04830 d319ef95bbd08b25143f0b6fa9f4523a 732 PANTHER PTHR37291 423 720 4.2E-38 T 23-04-2016 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PANTHER PTHR11405 16 332 1.5E-123 T 23-04-2016 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 28 331 40.245 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 181 327 1.1E-23 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 Gene3D G3DSA:3.40.50.1370 173 316 4.9E-46 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 29 329 1.3E-89 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 Gene3D G3DSA:3.40.50.1370 29 172 4.5E-49 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PANTHER PTHR11405:SF16 16 332 1.5E-123 T 23-04-2016 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 103 112 7.3E-30 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 310 324 7.3E-30 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 291 7.3E-30 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 65 87 7.3E-30 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 245 254 7.3E-30 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 160 177 7.3E-30 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 294 317 4.7E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 161 172 4.7E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 75 94 4.7E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 291 4.7E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 29 173 2.8E-39 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 SUPERFAMILY SSF53671 28 331 2.36E-94 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS01360 e6f59283e5d8e30a006e36689be5751d 337 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 75 82 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CYCME_RS03385 e24bb2d1275a6e5c7c824c416471a92c 223 SUPERFAMILY SSF56112 35 179 5.2E-13 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS03385 e24bb2d1275a6e5c7c824c416471a92c 223 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 35 195 1.6E-7 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 CYCME_RS03385 e24bb2d1275a6e5c7c824c416471a92c 223 Gene3D G3DSA:1.10.510.10 112 182 4.3E-5 T 23-04-2016 CYCME_RS12530 6910a4b4c279b75dfc24448773263032 105 Gene3D G3DSA:3.30.230.10 1 101 4.7E-26 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS12530 6910a4b4c279b75dfc24448773263032 105 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 CYCME_RS12530 6910a4b4c279b75dfc24448773263032 105 SUPERFAMILY SSF54211 1 101 5.56E-22 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS12530 6910a4b4c279b75dfc24448773263032 105 Pfam PF00825 Ribonuclease P 1 100 3.2E-25 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CYCME_RS12530 6910a4b4c279b75dfc24448773263032 105 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 90 3.0E-15 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CYCME_RS12530 6910a4b4c279b75dfc24448773263032 105 PANTHER PTHR33992 4 103 1.2E-19 T 23-04-2016 CYCME_RS12530 6910a4b4c279b75dfc24448773263032 105 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 100 1.6E-20 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CYCME_RS12530 6910a4b4c279b75dfc24448773263032 105 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.32 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CYCME_RS09785 760f9446cb3ab989f2c7e73421774a70 157 PANTHER PTHR35458 1 156 1.2E-52 T 23-04-2016 CYCME_RS09785 760f9446cb3ab989f2c7e73421774a70 157 Gene3D G3DSA:3.40.50.1010 1 153 3.9E-44 T 23-04-2016 IPR029060 PIN domain-like CYCME_RS09785 760f9446cb3ab989f2c7e73421774a70 157 Pfam PF01936 NYN domain 3 151 1.4E-39 T 23-04-2016 IPR021139 NYN domain, limkain-b1-type CYCME_RS11165 1d50db2149ccdaba5a673b24f67ca45f 151 SUPERFAMILY SSF89447 2 132 2.72E-44 T 23-04-2016 CYCME_RS11165 1d50db2149ccdaba5a673b24f67ca45f 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 51.542 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CYCME_RS11165 1d50db2149ccdaba5a673b24f67ca45f 151 Pfam PF02381 MraZ protein, putative antitoxin-like 1 74 2.5E-17 T 23-04-2016 IPR020603 MraZ domain CYCME_RS11165 1d50db2149ccdaba5a673b24f67ca45f 151 Pfam PF02381 MraZ protein, putative antitoxin-like 77 125 1.3E-16 T 23-04-2016 IPR020603 MraZ domain CYCME_RS11165 1d50db2149ccdaba5a673b24f67ca45f 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 124 1.0E-46 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CYCME_RS11165 1d50db2149ccdaba5a673b24f67ca45f 151 PANTHER PTHR34701 2 151 2.4E-56 T 23-04-2016 CYCME_RS11165 1d50db2149ccdaba5a673b24f67ca45f 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 128 1.8E-45 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 35 447 5.3E-193 T 23-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 158 369 1.2E-76 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 449 2.1E-178 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 SUPERFAMILY SSF52540 107 374 7.55E-98 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 Gene3D G3DSA:3.40.50.300 107 371 6.0E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 PANTHER PTHR15184 11 451 4.0E-231 T 23-04-2016 CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 360 369 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 PANTHER PTHR15184:SF9 11 451 4.0E-231 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS09090 c1fde717ddb6f70c39ab9136f8d2d9fd 461 SMART SM00382 170 353 6.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 SUPERFAMILY SSF52540 198 372 3.5E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 Pfam PF00271 Helicase conserved C-terminal domain 515 589 1.2E-5 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 SMART SM00487 197 394 1.8E-19 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 Pfam PF04851 Type III restriction enzyme, res subunit 199 362 4.0E-14 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 Gene3D G3DSA:3.40.50.300 407 430 1.6E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 Gene3D G3DSA:3.40.50.300 495 634 1.6E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 PANTHER PTHR30580 1 733 4.7E-254 T 23-04-2016 CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 TIGRFAM TIGR00595 priA: primosomal protein N' 223 730 1.2E-190 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 SUPERFAMILY SSF52540 408 436 3.77E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 SUPERFAMILY SSF52540 497 619 3.77E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 24.297 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 SMART SM00490 494 591 9.4E-8 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS02470 a6ddd7863d0739771e5a8567ca9c43e4 733 Gene3D G3DSA:3.40.50.300 198 383 7.0E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 Gene3D G3DSA:3.30.70.360 186 281 1.5E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 PANTHER PTHR11014 1 381 4.9E-136 T 23-04-2016 CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 142 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 SUPERFAMILY SSF55031 177 281 1.94E-18 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 Gene3D G3DSA:3.40.630.10 320 379 2.8E-57 T 23-04-2016 CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 Gene3D G3DSA:3.40.630.10 1 185 2.8E-57 T 23-04-2016 CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 Pfam PF07687 Peptidase dimerisation domain 174 282 5.4E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 PANTHER PTHR11014:SF75 1 381 4.9E-136 T 23-04-2016 CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 SUPERFAMILY SSF53187 298 379 1.46E-53 T 23-04-2016 CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 SUPERFAMILY SSF53187 1 176 1.46E-53 T 23-04-2016 CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 Pfam PF01546 Peptidase family M20/M25/M40 73 376 1.2E-30 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CYCME_RS11625 ce4621b462f2b7aa577c363319ba26e0 381 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 4 375 3.0E-120 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 CYCME_RS11125 e6d1f9e54f33680e70b0f9c413ddc857 398 PANTHER PTHR30474 2 398 1.3E-147 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CYCME_RS11125 e6d1f9e54f33680e70b0f9c413ddc857 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.4E-126 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CYCME_RS11125 e6d1f9e54f33680e70b0f9c413ddc857 398 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 21 391 38.216 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CYCME_RS11125 e6d1f9e54f33680e70b0f9c413ddc857 398 Pfam PF01098 Cell cycle protein 25 382 6.5E-103 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CYCME_RS11125 e6d1f9e54f33680e70b0f9c413ddc857 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CYCME_RS11125 e6d1f9e54f33680e70b0f9c413ddc857 398 PANTHER PTHR30474:SF2 2 398 1.3E-147 T 23-04-2016 CYCME_RS04315 7cace85410ec03a30bc48c60171c89b7 152 SUPERFAMILY SSF74942 84 151 1.12E-16 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CYCME_RS04315 7cace85410ec03a30bc48c60171c89b7 152 PANTHER PTHR33867 1 152 1.3E-48 T 23-04-2016 CYCME_RS04315 7cace85410ec03a30bc48c60171c89b7 152 SUPERFAMILY SSF75420 6 83 3.92E-23 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CYCME_RS04315 7cace85410ec03a30bc48c60171c89b7 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 152 24.633 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CYCME_RS04315 7cace85410ec03a30bc48c60171c89b7 152 Gene3D G3DSA:2.30.30.180 90 150 8.0E-16 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CYCME_RS04315 7cace85410ec03a30bc48c60171c89b7 152 PANTHER PTHR33867:SF1 1 152 1.3E-48 T 23-04-2016 CYCME_RS04315 7cace85410ec03a30bc48c60171c89b7 152 Gene3D G3DSA:3.30.300.70 3 80 2.3E-28 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CYCME_RS04315 7cace85410ec03a30bc48c60171c89b7 152 Pfam PF02576 Putative ribosome maturation factor RimP 11 148 9.6E-47 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CYCME_RS04505 bdada5c69c19b98f9afa107a6e82b37f 420 Pfam PF02120 Flagellar hook-length control protein FliK 292 373 1.6E-21 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal CYCME_RS04505 bdada5c69c19b98f9afa107a6e82b37f 420 PANTHER PTHR37533:SF2 273 420 1.0E-33 T 23-04-2016 CYCME_RS04505 bdada5c69c19b98f9afa107a6e82b37f 420 PANTHER PTHR37533 273 420 1.0E-33 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SUPERFAMILY SSF141868 759 1007 1.14E-85 T 23-04-2016 IPR001633 EAL domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Gene3D G3DSA:3.30.450.40 283 457 1.0E-12 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SMART SM00267 571 743 3.7E-64 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 PANTHER PTHR10799 967 986 4.3E-81 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 PANTHER PTHR10799 461 833 4.3E-81 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 PANTHER PTHR10799 401 425 4.3E-81 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 PANTHER PTHR10799 1 106 4.3E-81 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 PANTHER PTHR10799:SF774 967 986 4.3E-81 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 PANTHER PTHR10799:SF774 461 833 4.3E-81 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 PANTHER PTHR10799:SF774 401 425 4.3E-81 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 PANTHER PTHR10799:SF774 1 106 4.3E-81 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SUPERFAMILY SSF55073 587 744 2.75E-50 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 580 741 3.9E-45 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Pfam PF00563 EAL domain 759 995 2.4E-75 T 23-04-2016 IPR001633 EAL domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Gene3D G3DSA:3.30.450.20 468 570 3.4E-26 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Pfam PF00990 Diguanylate cyclase, GGDEF domain 582 738 3.0E-51 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SMART SM00091 457 523 3.5E-6 T 23-04-2016 IPR000014 PAS domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SMART SM00091 168 234 1.4 T 23-04-2016 IPR000014 PAS domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SMART SM00052 753 1000 6.1E-103 T 23-04-2016 IPR001633 EAL domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SUPERFAMILY SSF52172 6 128 1.85E-28 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Gene3D G3DSA:3.20.20.450 758 1007 6.6E-92 T 23-04-2016 IPR001633 EAL domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SMART SM00086 245 285 1.4 T 23-04-2016 IPR001610 PAC motif CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SMART SM00086 529 571 0.8 T 23-04-2016 IPR001610 PAC motif CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Gene3D G3DSA:3.30.70.270 583 751 1.1E-58 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Gene3D G3DSA:3.30.450.20 163 282 1.4E-11 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Pfam PF00072 Response regulator receiver domain 7 117 2.7E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SMART SM00448 5 119 6.2E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SUPERFAMILY SSF55781 279 449 6.54E-9 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 460 576 5.3E-19 T 23-04-2016 IPR000014 PAS domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 165 291 4.3E-11 T 23-04-2016 IPR000014 PAS domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Gene3D G3DSA:3.40.50.2300 6 126 1.1E-28 T 23-04-2016 CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SUPERFAMILY SSF55785 161 283 4.19E-9 T 23-04-2016 IPR000014 PAS domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Pfam PF13426 PAS domain 180 284 1.7E-6 T 23-04-2016 IPR000014 PAS domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 Pfam PF13426 PAS domain 468 570 1.5E-15 T 23-04-2016 IPR000014 PAS domain CYCME_RS10430 e9761320424389483e55c2d5080a642d 1011 SUPERFAMILY SSF55785 462 569 6.28E-27 T 23-04-2016 IPR000014 PAS domain CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:2.40.270.10 1080 1259 2.1E-90 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:2.40.270.10 800 827 2.1E-90 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:2.40.50.150 1065 1079 1.4E-55 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:2.40.50.150 835 944 1.4E-55 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Pfam PF10385 RNA polymerase beta subunit external 1 domain 598 663 9.9E-26 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Pfam PF04565 RNA polymerase Rpb2, domain 3 520 587 4.0E-30 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Pfam PF00562 RNA polymerase Rpb2, domain 6 724 1281 2.5E-163 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1356 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1083 1095 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:3.90.1110.10 353 451 4.2E-65 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:3.90.1110.10 160 237 4.2E-65 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Pfam PF04560 RNA polymerase Rpb2, domain 7 1283 1357 2.4E-26 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 SUPERFAMILY SSF64484 12 233 0.0 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 SUPERFAMILY SSF64484 1059 1358 0.0 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 SUPERFAMILY SSF64484 350 946 0.0 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Pfam PF04563 RNA polymerase beta subunit 26 506 6.3E-41 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:2.40.50.100 722 799 4.5E-30 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1359 12.364 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:2.30.150.10 599 663 8.1E-28 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856 347 732 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856 1199 1359 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856 750 937 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856 1054 1148 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856 5 238 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Pfam PF04561 RNA polymerase Rpb2, domain 2 357 461 2.3E-15 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Pfam PF04561 RNA polymerase Rpb2, domain 2 159 226 8.6E-7 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:3.90.1100.10 452 598 3.2E-147 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:3.90.1100.10 666 720 3.2E-147 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 Gene3D G3DSA:3.90.1100.10 21 158 3.2E-147 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856:SF20 347 732 0.0 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856:SF20 1199 1359 0.0 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856:SF20 750 937 0.0 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856:SF20 1054 1148 0.0 T 23-04-2016 CYCME_RS03620 17a380ecae99fe5e5d8748cbac7a2929 1359 PANTHER PTHR20856:SF20 5 238 0.0 T 23-04-2016 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 Hamap MF_00600 60 kDa chaperonin [groL]. 1 549 41.626 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 PRINTS PR00298 60kDa chaperonin signature 267 290 2.5E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 PRINTS PR00298 60kDa chaperonin signature 82 109 2.5E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 PRINTS PR00298 60kDa chaperonin signature 397 418 2.5E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 PRINTS PR00298 60kDa chaperonin signature 26 52 2.5E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 PRINTS PR00298 60kDa chaperonin signature 349 374 2.5E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 Gene3D G3DSA:3.50.7.10 188 367 1.5E-99 T 23-04-2016 IPR027409 GroEL-like apical domain CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 SUPERFAMILY SSF48592 6 133 3.13E-76 T 23-04-2016 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 SUPERFAMILY SSF48592 405 520 3.13E-76 T 23-04-2016 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 SUPERFAMILY SSF54849 136 202 5.26E-24 T 23-04-2016 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 SUPERFAMILY SSF52029 183 375 7.33E-84 T 23-04-2016 IPR027409 GroEL-like apical domain CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 2.4E-93 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 Gene3D G3DSA:1.10.560.10 3 187 6.5E-46 T 23-04-2016 IPR027413 GroEL-like equatorial domain CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 Gene3D G3DSA:1.10.560.10 368 517 3.8E-39 T 23-04-2016 IPR027413 GroEL-like equatorial domain CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 526 2.9E-252 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CYCME_RS10590 3754830180fc8ccc7f3e60a7f5a0b6f3 550 PANTHER PTHR11353 1 550 3.8E-251 T 23-04-2016 CYCME_RS12330 538bac59fa489cd99dfa9a25b5433062 254 Pfam PF13614 AAA domain 3 177 3.7E-66 T 23-04-2016 IPR025669 AAA domain CYCME_RS12330 538bac59fa489cd99dfa9a25b5433062 254 SUPERFAMILY SSF52540 2 252 1.65E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12330 538bac59fa489cd99dfa9a25b5433062 254 PANTHER PTHR13696:SF52 2 252 6.2E-88 T 23-04-2016 CYCME_RS12330 538bac59fa489cd99dfa9a25b5433062 254 PANTHER PTHR13696 2 252 6.2E-88 T 23-04-2016 CYCME_RS12330 538bac59fa489cd99dfa9a25b5433062 254 Gene3D G3DSA:3.40.50.300 3 252 1.1E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 SUPERFAMILY SSF55174 16 117 3.53E-17 T 23-04-2016 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 Pfam PF01479 S4 domain 23 68 9.9E-11 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 125 139 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 Pfam PF00849 RNA pseudouridylate synthase 87 207 6.5E-14 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 91 251 2.6E-50 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 SUPERFAMILY SSF55120 85 257 2.88E-40 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 PANTHER PTHR21600 11 261 1.5E-80 T 23-04-2016 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 Gene3D G3DSA:3.10.290.10 21 79 6.2E-17 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 PANTHER PTHR21600:SF2 11 261 1.5E-80 T 23-04-2016 CYCME_RS08970 61ce11e490ca973a351dc3dfffbbfd99 264 SMART SM00363 23 80 2.8E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS09355 531e7634fc312820f6233740d9127600 104 SMART SM00418 8 89 4.5E-4 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS09355 531e7634fc312820f6233740d9127600 104 PANTHER PTHR33154 1 101 2.6E-32 T 23-04-2016 CYCME_RS09355 531e7634fc312820f6233740d9127600 104 PANTHER PTHR33154:SF5 1 101 2.6E-32 T 23-04-2016 CYCME_RS09355 531e7634fc312820f6233740d9127600 104 Gene3D G3DSA:1.10.10.10 2 93 8.4E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS09355 531e7634fc312820f6233740d9127600 104 SUPERFAMILY SSF46785 2 93 7.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS09355 531e7634fc312820f6233740d9127600 104 Pfam PF12840 Helix-turn-helix domain 13 69 5.9E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00260 531e7634fc312820f6233740d9127600 104 SMART SM00418 8 89 4.5E-4 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS00260 531e7634fc312820f6233740d9127600 104 PANTHER PTHR33154 1 101 2.6E-32 T 23-04-2016 CYCME_RS00260 531e7634fc312820f6233740d9127600 104 PANTHER PTHR33154:SF5 1 101 2.6E-32 T 23-04-2016 CYCME_RS00260 531e7634fc312820f6233740d9127600 104 Gene3D G3DSA:1.10.10.10 2 93 8.4E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00260 531e7634fc312820f6233740d9127600 104 SUPERFAMILY SSF46785 2 93 7.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00260 531e7634fc312820f6233740d9127600 104 Pfam PF12840 Helix-turn-helix domain 13 69 5.9E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00980 531e7634fc312820f6233740d9127600 104 SMART SM00418 8 89 4.5E-4 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS00980 531e7634fc312820f6233740d9127600 104 PANTHER PTHR33154 1 101 2.6E-32 T 23-04-2016 CYCME_RS00980 531e7634fc312820f6233740d9127600 104 PANTHER PTHR33154:SF5 1 101 2.6E-32 T 23-04-2016 CYCME_RS00980 531e7634fc312820f6233740d9127600 104 Gene3D G3DSA:1.10.10.10 2 93 8.4E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00980 531e7634fc312820f6233740d9127600 104 SUPERFAMILY SSF46785 2 93 7.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00980 531e7634fc312820f6233740d9127600 104 Pfam PF12840 Helix-turn-helix domain 13 69 5.9E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 SUPERFAMILY SSF82714 193 274 4.45E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PANTHER PTHR32063 2 1032 0.0 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 SUPERFAMILY SSF82693 277 333 1.75E-20 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 SUPERFAMILY SSF82693 156 191 1.75E-20 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 SUPERFAMILY SSF82866 299 507 1.96E-35 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 Gene3D G3DSA:3.30.70.1430 42 142 2.5E-27 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 SUPERFAMILY SSF82714 724 808 1.2E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.3E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.3E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 5.3E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 5.3E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 5.3E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 5.3E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 5.3E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1031 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 SUPERFAMILY SSF82693 566 667 2.17E-6 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 Pfam PF00873 AcrB/AcrD/AcrF family 6 1030 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 PANTHER PTHR32063:SF24 2 1032 0.0 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 SUPERFAMILY SSF82693 42 125 1.36E-20 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 SUPERFAMILY SSF82866 807 1031 1.57E-52 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 Gene3D G3DSA:1.10.3850.10 816 1031 8.6E-55 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 Gene3D G3DSA:1.10.3850.10 283 508 1.8E-52 T 23-04-2016 CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 Gene3D G3DSA:3.30.2090.10 726 809 4.0E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS08760 53dbc3d06659631cee54faf47f77992a 1039 Gene3D G3DSA:3.30.2090.10 192 275 4.5E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 Gene3D G3DSA:3.40.50.720 230 386 9.4E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 5 466 1.5E-150 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 459 49.624 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 228 387 8.7E-82 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 SMART SM00997 228 387 1.1E-112 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 Gene3D G3DSA:3.40.50.1480 388 467 5.1E-152 T 23-04-2016 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 Gene3D G3DSA:3.40.50.1480 5 229 5.1E-152 T 23-04-2016 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 PIRSF PIRSF001109 1 467 3.9E-196 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 PANTHER PTHR23420 178 467 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 PANTHER PTHR23420 1 140 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 250 266 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 SUPERFAMILY SSF52283 2 142 4.02E-119 T 23-04-2016 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 SUPERFAMILY SSF52283 180 227 4.02E-119 T 23-04-2016 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 SUPERFAMILY SSF52283 388 467 4.02E-119 T 23-04-2016 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 6 459 3.3E-194 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 77 91 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 SMART SM00996 5 466 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CYCME_RS01310 df950a1808264ff0533a1f589a1b0308 467 SUPERFAMILY SSF51735 228 387 1.83E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 SUPERFAMILY SSF46626 110 200 9.61E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 PANTHER PTHR33751:SF3 12 202 6.1E-62 T 23-04-2016 CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 SUPERFAMILY SSF46626 22 100 4.5E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 Gene3D G3DSA:1.10.760.10 28 102 2.1E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 33 97 1.3E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 Pfam PF00034 Cytochrome c 116 200 2.6E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 PANTHER PTHR33751 12 202 6.1E-62 T 23-04-2016 CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 PIRSF PIRSF000005 1 202 1.3E-63 T 23-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 CYCME_RS12125 823a8d2c055cac0f28f205e6baa0abd4 202 Gene3D G3DSA:1.10.760.10 118 201 7.2E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS05355 ed44eb515f35aad26587c042b214cd82 125 PANTHER PTHR10374 1 124 4.4E-57 T 23-04-2016 CYCME_RS05355 ed44eb515f35aad26587c042b214cd82 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 9.6E-23 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS05355 ed44eb515f35aad26587c042b214cd82 125 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 124 2.0E-60 T 23-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 CYCME_RS05355 ed44eb515f35aad26587c042b214cd82 125 SUPERFAMILY SSF54593 1 124 1.61E-33 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS05355 ed44eb515f35aad26587c042b214cd82 125 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 CYCME_RS05355 ed44eb515f35aad26587c042b214cd82 125 Gene3D G3DSA:3.10.180.10 1 124 3.2E-44 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS06925 2bd9e0ded03a11539893e0015bbb12ae 328 PANTHER PTHR22916:SF9 173 320 1.9E-59 T 23-04-2016 CYCME_RS06925 2bd9e0ded03a11539893e0015bbb12ae 328 PANTHER PTHR22916:SF9 1 150 1.9E-59 T 23-04-2016 CYCME_RS06925 2bd9e0ded03a11539893e0015bbb12ae 328 Pfam PF00535 Glycosyl transferase family 2 9 133 1.4E-13 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS06925 2bd9e0ded03a11539893e0015bbb12ae 328 Gene3D G3DSA:3.90.550.10 7 261 1.8E-44 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06925 2bd9e0ded03a11539893e0015bbb12ae 328 SUPERFAMILY SSF53448 6 300 1.56E-47 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06925 2bd9e0ded03a11539893e0015bbb12ae 328 PANTHER PTHR22916 173 320 1.9E-59 T 23-04-2016 CYCME_RS06925 2bd9e0ded03a11539893e0015bbb12ae 328 PANTHER PTHR22916 1 150 1.9E-59 T 23-04-2016 CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 PANTHER PTHR10804 1 255 1.2E-163 T 23-04-2016 CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 42.36 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 PANTHER PTHR10804:SF75 1 255 1.2E-163 T 23-04-2016 CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 SUPERFAMILY SSF55920 4 254 2.88E-92 T 23-04-2016 IPR000994 Peptidase M24, structural domain CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 Gene3D G3DSA:3.90.230.10 4 255 2.3E-100 T 23-04-2016 IPR000994 Peptidase M24, structural domain CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 3.8E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 3.8E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 3.8E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 3.8E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 249 1.3E-100 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 Pfam PF00557 Metallopeptidase family M24 12 240 1.6E-55 T 23-04-2016 IPR000994 Peptidase M24, structural domain CYCME_RS07710 9649a8133dbe908230759e2cdeed3f9a 267 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 PANTHER PTHR11061 14 442 9.7E-109 T 23-04-2016 CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 Gene3D G3DSA:3.40.50.150 248 441 8.8E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 425 435 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 17 442 62.621 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 SUPERFAMILY SSF50249 15 72 8.57E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 23 435 2.3E-103 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 PANTHER PTHR11061:SF30 14 442 9.7E-109 T 23-04-2016 CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 Gene3D G3DSA:2.40.50.140 14 86 2.2E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 SUPERFAMILY SSF53335 74 442 1.31E-75 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS08495 f37b0ff993d8126ea22f9ae09ec5ca95 442 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 272 441 4.7E-23 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 Gene3D G3DSA:4.10.520.10 2 93 2.0E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.6E-31 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.029 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 SMART SM00411 3 92 4.7E-41 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 PANTHER PTHR33175:SF2 3 94 7.9E-48 T 23-04-2016 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 SUPERFAMILY SSF47729 3 92 4.42E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 96 2.2E-45 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 PANTHER PTHR33175 3 94 7.9E-48 T 23-04-2016 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.6E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.6E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08795 e19d7480be286878595512dd81b6b7c2 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.6E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS03930 496a2f251c8e0e1994a585d218390f0c 211 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 211 27.66 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CYCME_RS03930 496a2f251c8e0e1994a585d218390f0c 211 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 65 5.9E-11 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CYCME_RS03930 496a2f251c8e0e1994a585d218390f0c 211 Gene3D G3DSA:3.40.50.620 5 211 2.1E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS03930 496a2f251c8e0e1994a585d218390f0c 211 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 210 7.4E-45 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CYCME_RS03930 496a2f251c8e0e1994a585d218390f0c 211 PANTHER PTHR12039 1 193 3.0E-32 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CYCME_RS03930 496a2f251c8e0e1994a585d218390f0c 211 Pfam PF01467 Cytidylyltransferase-like 7 185 6.3E-29 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CYCME_RS03930 496a2f251c8e0e1994a585d218390f0c 211 SUPERFAMILY SSF52374 3 211 2.6E-45 T 23-04-2016 CYCME_RS03725 56eaf80bd4bb34efaf8713224c0c535d 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.214 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03725 56eaf80bd4bb34efaf8713224c0c535d 132 Gene3D G3DSA:3.30.1490.10 76 131 3.6E-26 T 23-04-2016 CYCME_RS03725 56eaf80bd4bb34efaf8713224c0c535d 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03725 56eaf80bd4bb34efaf8713224c0c535d 132 PANTHER PTHR11758 1 132 2.1E-51 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03725 56eaf80bd4bb34efaf8713224c0c535d 132 Gene3D G3DSA:3.30.1370.30 2 73 2.0E-24 T 23-04-2016 CYCME_RS03725 56eaf80bd4bb34efaf8713224c0c535d 132 SUPERFAMILY SSF56047 2 131 4.19E-43 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03725 56eaf80bd4bb34efaf8713224c0c535d 132 Pfam PF00410 Ribosomal protein S8 5 131 1.1E-44 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 Gene3D G3DSA:3.90.105.10 146 176 2.4E-19 T 23-04-2016 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 SUPERFAMILY SSF63867 343 421 2.09E-22 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 192 328 4.5E-35 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 SMART SM00852 195 332 7.2E-44 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 Gene3D G3DSA:3.40.980.10 177 339 4.4E-64 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 SUPERFAMILY SSF53218 193 337 4.58E-46 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 Pfam PF00994 Probable molybdopterin binding domain 195 331 2.4E-29 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 Gene3D G3DSA:2.40.340.10 343 413 1.4E-28 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 Pfam PF03454 MoeA C-terminal region (domain IV) 346 413 7.1E-17 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 Pfam PF03453 MoeA N-terminal region (domain I and II) 20 182 4.1E-34 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 268 301 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 PANTHER PTHR10192:SF11 14 422 7.0E-164 T 23-04-2016 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 PANTHER PTHR10192 14 422 7.0E-164 T 23-04-2016 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 SUPERFAMILY SSF63882 18 188 3.92E-50 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS03815 97c390c781ac04f2a4fb4e75c4af413c 422 Gene3D G3DSA:2.170.190.11 62 145 2.4E-28 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 293 6.2E-98 T 23-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- CYCME_RS05205 df16271a645402bf0009252296759aab 308 SMART SM00047 141 300 2.4E-36 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PANTHER PTHR33308:SF3 31 299 2.0E-39 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 157 295 5.0E-24 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PANTHER PTHR33308 31 299 2.0E-39 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 Pfam PF10135 Rod binding protein 52 99 5.9E-16 T 23-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal CYCME_RS05205 df16271a645402bf0009252296759aab 308 PRINTS PR01002 Flagellar protein FlgJ signature 146 169 1.1E-38 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PRINTS PR01002 Flagellar protein FlgJ signature 76 98 1.1E-38 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 1.1E-38 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PRINTS PR01002 Flagellar protein FlgJ signature 212 233 1.1E-38 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 1.1E-38 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PRINTS PR01002 Flagellar protein FlgJ signature 234 255 1.1E-38 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PRINTS PR01002 Flagellar protein FlgJ signature 170 188 1.1E-38 T 23-04-2016 CYCME_RS05205 df16271a645402bf0009252296759aab 308 PRINTS PR01002 Flagellar protein FlgJ signature 190 211 1.1E-38 T 23-04-2016 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 SUPERFAMILY SSF55961 166 441 2.51E-69 T 23-04-2016 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 PANTHER PTHR21266:SF30 31 223 1.2E-60 T 23-04-2016 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 Gene3D G3DSA:3.90.380.10 154 441 1.6E-120 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 Pfam PF00355 Rieske [2Fe-2S] domain 49 133 6.4E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 PANTHER PTHR21266 31 223 1.2E-60 T 23-04-2016 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 64 79 3.5E-64 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 3.5E-64 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 190 212 3.5E-64 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 3.5E-64 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 3.5E-64 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 3.5E-64 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 Gene3D G3DSA:2.102.10.10 49 153 2.8E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 SUPERFAMILY SSF50022 19 164 1.44E-44 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 92 115 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS03275 bb317991b8d6ccf5f112934bec5ffd40 443 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 169 434 7.2E-58 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PANTHER PTHR22912 222 691 8.3E-154 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 239 554 2.3E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 Gene3D G3DSA:3.50.50.60 238 373 3.1E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PANTHER PTHR22912:SF29 222 691 8.3E-154 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 405 423 1.0E-29 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 493 509 1.0E-29 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 260 1.0E-29 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 366 384 1.0E-29 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 522 544 1.0E-29 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 SUPERFAMILY SSF51905 238 601 1.22E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 378 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 640 655 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 287 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 430 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 662 682 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 240 262 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 494 508 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 537 544 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 575 596 2.0E-57 T 23-04-2016 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 Gene3D G3DSA:3.30.390.30 574 688 3.2E-39 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 Gene3D G3DSA:3.50.50.60 374 557 6.7E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 579 685 2.2E-31 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 Pfam PF09335 SNARE associated Golgi protein 68 184 3.2E-23 T 23-04-2016 IPR032816 SNARE associated Golgi protein CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 SUPERFAMILY SSF55424 575 690 5.84E-35 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CYCME_RS07730 b86db03cb7f738ea57b82a39dcd062d7 713 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 273 283 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 130 1.3E-11 T 23-04-2016 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 SUPERFAMILY SSF55874 17 203 5.63E-51 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 590 27.982 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 SUPERFAMILY SSF118116 403 592 6.93E-59 T 23-04-2016 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 PANTHER PTHR10073 3 581 1.1E-158 T 23-04-2016 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 Gene3D G3DSA:3.30.565.10 3 207 2.5E-74 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 310 2.5E-95 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 Pfam PF08676 MutL C terminal dimerisation domain 403 550 2.3E-46 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 SMART SM01340 212 330 3.5E-54 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 Gene3D G3DSA:3.30.230.10 219 329 3.9E-36 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 SMART SM00853 407 550 7.8E-45 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 215 329 2.4E-36 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CYCME_RS04450 92644627c056016e3caabe7cf6b8a896 594 SUPERFAMILY SSF54211 205 329 7.59E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS05170 29a22f4f6a12f710588474a70d46a502 139 PANTHER PTHR30435:SF2 1 139 5.1E-59 T 23-04-2016 CYCME_RS05170 29a22f4f6a12f710588474a70d46a502 139 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 7.1E-11 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CYCME_RS05170 29a22f4f6a12f710588474a70d46a502 139 Pfam PF00460 Flagella basal body rod protein 7 34 3.6E-5 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CYCME_RS05170 29a22f4f6a12f710588474a70d46a502 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CYCME_RS05170 29a22f4f6a12f710588474a70d46a502 139 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 139 1.2E-47 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CYCME_RS05170 29a22f4f6a12f710588474a70d46a502 139 PANTHER PTHR30435 1 139 5.1E-59 T 23-04-2016 CYCME_RS03095 cb4bbf9deeb9b99f85af1a09d19dcfe3 232 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.0E-44 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CYCME_RS03095 cb4bbf9deeb9b99f85af1a09d19dcfe3 232 Pfam PF13500 AAA domain 4 212 1.0E-37 T 23-04-2016 CYCME_RS03095 cb4bbf9deeb9b99f85af1a09d19dcfe3 232 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 28.208 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CYCME_RS03095 cb4bbf9deeb9b99f85af1a09d19dcfe3 232 SUPERFAMILY SSF52540 1 214 3.37E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03095 cb4bbf9deeb9b99f85af1a09d19dcfe3 232 Gene3D G3DSA:3.40.50.300 3 215 3.1E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03095 cb4bbf9deeb9b99f85af1a09d19dcfe3 232 PIRSF PIRSF006755 1 230 6.2E-64 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CYCME_RS03095 cb4bbf9deeb9b99f85af1a09d19dcfe3 232 PANTHER PTHR21343 1 214 1.3E-80 T 23-04-2016 CYCME_RS03095 cb4bbf9deeb9b99f85af1a09d19dcfe3 232 PANTHER PTHR21343:SF13 1 214 1.3E-80 T 23-04-2016 CYCME_RS10060 b5edaca585809745cc42d81281255c51 311 SUPERFAMILY SSF103481 41 140 1.44E-9 T 23-04-2016 CYCME_RS10060 b5edaca585809745cc42d81281255c51 311 Pfam PF00892 EamA-like transporter family 146 298 6.0E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS10060 b5edaca585809745cc42d81281255c51 311 Pfam PF00892 EamA-like transporter family 6 137 3.6E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS10060 b5edaca585809745cc42d81281255c51 311 PANTHER PTHR12715 1 299 9.1E-34 T 23-04-2016 CYCME_RS10060 b5edaca585809745cc42d81281255c51 311 SUPERFAMILY SSF103481 222 299 3.92E-11 T 23-04-2016 CYCME_RS04330 7c2462027c9b2e965054870e43e0b5c6 121 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 119 22.126 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CYCME_RS04330 7c2462027c9b2e965054870e43e0b5c6 121 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CYCME_RS04330 7c2462027c9b2e965054870e43e0b5c6 121 PANTHER PTHR33515 1 114 5.1E-41 T 23-04-2016 CYCME_RS04330 7c2462027c9b2e965054870e43e0b5c6 121 Gene3D G3DSA:3.30.300.20 4 105 3.4E-37 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CYCME_RS04330 7c2462027c9b2e965054870e43e0b5c6 121 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 99 2.0E-20 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CYCME_RS04330 7c2462027c9b2e965054870e43e0b5c6 121 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 113 2.7E-32 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CYCME_RS04330 7c2462027c9b2e965054870e43e0b5c6 121 Pfam PF02033 Ribosome-binding factor A 7 112 1.6E-31 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CYCME_RS04330 7c2462027c9b2e965054870e43e0b5c6 121 SUPERFAMILY SSF89919 2 106 1.44E-33 T 23-04-2016 IPR023799 Ribosome-binding factor A domain CYCME_RS05430 f080022e0694b003cec091576de199bc 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CYCME_RS05430 f080022e0694b003cec091576de199bc 258 PIRSF PIRSF005902 1 258 3.0E-74 T 23-04-2016 IPR001130 TatD family GO:0016788 CYCME_RS05430 f080022e0694b003cec091576de199bc 258 Gene3D G3DSA:3.20.20.140 1 256 8.2E-80 T 23-04-2016 CYCME_RS05430 f080022e0694b003cec091576de199bc 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 257 8.2E-83 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 CYCME_RS05430 f080022e0694b003cec091576de199bc 258 SUPERFAMILY SSF51556 1 257 2.56E-81 T 23-04-2016 IPR032466 Metal-dependent hydrolase CYCME_RS05430 f080022e0694b003cec091576de199bc 258 PANTHER PTHR10060 1 258 7.3E-115 T 23-04-2016 IPR001130 TatD family GO:0016788 CYCME_RS05430 f080022e0694b003cec091576de199bc 258 PANTHER PTHR10060:SF20 1 258 7.3E-115 T 23-04-2016 CYCME_RS05430 f080022e0694b003cec091576de199bc 258 Pfam PF01026 TatD related DNase 3 256 4.2E-76 T 23-04-2016 IPR001130 TatD family GO:0016788 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 SMART SM00954 247 357 7.7E-62 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 SMART SM00471 53 165 1.0E-8 T 23-04-2016 IPR003607 HD/PDEase domain CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 PANTHER PTHR21262 1 720 0.0 T 23-04-2016 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 Gene3D G3DSA:3.10.20.30 398 460 5.4E-16 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 Gene3D G3DSA:3.30.460.10 208 336 1.0E-43 T 23-04-2016 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 Pfam PF04607 Region found in RelA / SpoT proteins 247 356 5.7E-35 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 PANTHER PTHR21262:SF0 1 720 0.0 T 23-04-2016 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 SUPERFAMILY SSF109604 16 201 8.16E-70 T 23-04-2016 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 38 716 2.2E-225 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 Pfam PF13291 ACT domain 641 717 3.5E-15 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 SUPERFAMILY SSF55021 647 717 2.18E-9 T 23-04-2016 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 SUPERFAMILY SSF81271 386 458 1.35E-17 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 Pfam PF02824 TGS domain 399 458 3.8E-15 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 Pfam PF13328 HD domain 38 187 1.6E-48 T 23-04-2016 IPR003607 HD/PDEase domain CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 Gene3D G3DSA:3.30.70.260 644 715 3.0E-9 T 23-04-2016 CYCME_RS03045 6aeac6bf77b0029b4819bce1d9014efa 720 SUPERFAMILY SSF81301 192 403 1.63E-60 T 23-04-2016 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 2.3E-18 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 2.3E-18 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.3E-18 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 SUPERFAMILY SSF82679 3 113 8.37E-39 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 Pfam PF00467 KOW motif 126 159 6.3E-6 T 23-04-2016 IPR005824 KOW CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 SUPERFAMILY SSF50104 121 177 4.89E-17 T 23-04-2016 IPR008991 Translation protein SH3-like domain CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 Gene3D G3DSA:3.30.70.940 4 114 8.8E-44 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 SMART SM00739 123 150 1.5E-5 T 23-04-2016 IPR005824 KOW CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 24.069 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 SMART SM00738 2 111 3.8E-45 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 1.7E-67 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 Gene3D G3DSA:2.30.30.30 116 177 9.3E-29 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 Pfam PF02357 Transcription termination factor nusG 4 108 6.1E-27 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CYCME_RS03595 b517d403f2cc72483cdd3bbebaa0dbca 177 PANTHER PTHR30265 4 177 2.3E-76 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Gene3D G3DSA:3.40.50.300 2 283 1.2E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 SUPERFAMILY SSF54211 475 594 1.34E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 SMART SM00889 476 594 6.1E-62 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Pfam PF03764 Elongation factor G, domain IV 475 593 6.8E-45 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Pfam PF14492 Elongation Factor G, domain II 400 474 3.7E-28 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 SUPERFAMILY SSF52540 3 278 1.37E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PANTHER PTHR23115 300 687 0.0 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PANTHER PTHR23115 3 174 0.0 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PANTHER PTHR23115 251 279 0.0 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PRINTS PR00315 GTP-binding elongation factor signature 55 63 5.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PRINTS PR00315 GTP-binding elongation factor signature 75 85 5.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PRINTS PR00315 GTP-binding elongation factor signature 9 22 5.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PRINTS PR00315 GTP-binding elongation factor signature 127 136 5.1E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Pfam PF00009 Elongation factor Tu GTP binding domain 6 277 1.9E-62 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 SUPERFAMILY SSF50447 261 398 3.09E-32 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 688 1.4E-297 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Gene3D G3DSA:2.40.30.10 302 400 8.1E-35 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 SUPERFAMILY SSF54980 400 477 3.2E-20 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PANTHER PTHR23115:SF154 300 687 0.0 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PANTHER PTHR23115:SF154 3 174 0.0 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 PANTHER PTHR23115:SF154 251 279 0.0 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 SMART SM00838 596 683 1.6E-46 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Gene3D G3DSA:3.30.70.240 596 681 2.3E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Gene3D G3DSA:3.30.230.10 480 595 1.5E-45 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 SUPERFAMILY SSF54980 599 689 1.15E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Hamap MF_00054_B Elongation factor G [fusA]. 3 687 101.016 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Pfam PF03144 Elongation factor Tu domain 2 320 387 7.6E-18 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Pfam PF00679 Elongation factor G C-terminus 596 682 3.5E-28 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 Gene3D G3DSA:3.30.70.870 401 476 4.5E-31 T 23-04-2016 CYCME_RS01900 ba7ab2c10b3894532f64bd20043d5c1f 694 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 175 9.1E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 PIRSF PIRSF019169 1 353 1.4E-122 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 Gene3D G3DSA:3.30.420.40 195 314 3.8E-23 T 23-04-2016 CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 SUPERFAMILY SSF53067 74 174 2.46E-11 T 23-04-2016 CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 Pfam PF11104 Type IV pilus assembly protein PilM; 13 352 2.9E-130 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 SUPERFAMILY SSF53067 191 351 2.33E-21 T 23-04-2016 CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 PANTHER PTHR32432 1 352 2.8E-79 T 23-04-2016 CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 PANTHER PTHR32432:SF3 1 352 2.8E-79 T 23-04-2016 CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 11 352 1.8E-112 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM CYCME_RS00280 4c66b9c93ef6ce0bb46aba4a0754fad4 353 SMART SM00842 11 202 0.0021 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 PANTHER PTHR23083 516 671 9.4E-59 T 23-04-2016 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 PANTHER PTHR23083 370 413 9.4E-59 T 23-04-2016 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 PANTHER PTHR23083 708 773 9.4E-59 T 23-04-2016 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 PANTHER PTHR23083 27 264 9.4E-59 T 23-04-2016 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SUPERFAMILY SSF48452 273 572 2.88E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 Pfam PF13414 TPR repeat 34 69 8.4E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 Gene3D G3DSA:1.25.40.10 496 777 1.7E-42 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 Pfam PF14559 Tetratricopeptide repeat 620 674 1.1E-6 T 23-04-2016 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SUPERFAMILY SSF48452 170 271 6.32E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 Pfam PF13428 Tetratricopeptide repeat 371 412 5.5E-5 T 23-04-2016 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SUPERFAMILY SSF48452 557 773 1.06E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 163 196 0.064 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 61 94 56.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 370 403 16.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 746 779 7.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 95 128 160.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 574 607 18.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 642 675 0.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 608 641 0.032 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 506 539 0.33 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 129 162 29.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 298 331 400.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 27 60 1.8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SMART SM00028 404 437 2.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 Gene3D G3DSA:1.25.40.10 25 269 2.2E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 Gene3D G3DSA:1.25.40.10 274 484 6.2E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 SUPERFAMILY SSF48452 25 195 1.9E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS06835 85b2e4f912dc4e113bb35c62dc984f36 796 Pfam PF13432 Tetratricopeptide repeat 719 774 5.0E-4 T 23-04-2016 CYCME_RS02985 eecdba2c752e040b1b5f4fc3b7c687be 328 SUPERFAMILY SSF53850 31 228 9.52E-18 T 23-04-2016 CYCME_RS02985 eecdba2c752e040b1b5f4fc3b7c687be 328 Pfam PF09084 NMT1/THI5 like 56 250 4.1E-9 T 23-04-2016 IPR015168 SsuA/THI5-like CYCME_RS02985 eecdba2c752e040b1b5f4fc3b7c687be 328 Gene3D G3DSA:3.40.190.10 54 127 1.6E-7 T 23-04-2016 CYCME_RS02985 eecdba2c752e040b1b5f4fc3b7c687be 328 Gene3D G3DSA:3.40.190.10 128 243 8.9E-9 T 23-04-2016 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 SUPERFAMILY SSF82829 243 316 9.42E-12 T 23-04-2016 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 304 22.619 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 203 5.5E-52 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 Pfam PF11734 TilS substrate C-terminal domain 362 434 3.2E-23 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 Gene3D G3DSA:3.40.50.620 15 180 6.8E-14 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 PANTHER PTHR11807:SF2 20 442 2.5E-75 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 SMART SM00977 361 434 3.1E-23 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 SUPERFAMILY SSF56037 329 434 2.88E-25 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 SUPERFAMILY SSF52402 12 232 2.87E-57 T 23-04-2016 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 PANTHER PTHR11807 20 442 2.5E-75 T 23-04-2016 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 407 8.7E-16 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 Pfam PF09179 TilS substrate binding domain 246 311 4.2E-9 T 23-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CYCME_RS07620 1d8aa31b93a206ec2b7ec84ce2c727d9 442 Pfam PF01171 PP-loop family 20 200 2.4E-52 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 SUPERFAMILY SSF50447 207 303 1.24E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 SUPERFAMILY SSF50465 300 395 1.81E-36 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 7.5E-225 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.949 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 SUPERFAMILY SSF52540 6 221 1.33E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.7E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.4E-58 T 23-04-2016 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.4E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.9E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 Gene3D G3DSA:3.40.50.300 4 213 2.4E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 PANTHER PTHR23115 1 395 3.2E-261 T 23-04-2016 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 Gene3D G3DSA:2.40.30.10 302 395 4.7E-47 T 23-04-2016 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 PANTHER PTHR23115:SF151 1 395 3.2E-261 T 23-04-2016 CYCME_RS03645 b6da8d58a07ba9c783285d1973ff952d 396 Gene3D G3DSA:2.40.30.10 214 300 1.5E-34 T 23-04-2016 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.1E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 SUPERFAMILY SSF50447 207 303 1.24E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 SUPERFAMILY SSF50465 300 395 1.81E-36 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 7.5E-225 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.949 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 SUPERFAMILY SSF52540 6 221 1.33E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.7E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.4E-58 T 23-04-2016 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.4E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.9E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 Gene3D G3DSA:3.40.50.300 4 213 2.4E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 PANTHER PTHR23115 1 395 3.2E-261 T 23-04-2016 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 Gene3D G3DSA:2.40.30.10 302 395 4.7E-47 T 23-04-2016 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 PANTHER PTHR23115:SF151 1 395 3.2E-261 T 23-04-2016 CYCME_RS03580 b6da8d58a07ba9c783285d1973ff952d 396 Gene3D G3DSA:2.40.30.10 214 300 1.5E-34 T 23-04-2016 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 5.6E-56 T 23-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 PANTHER PTHR22642 25 296 2.2E-257 T 23-04-2016 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 PANTHER PTHR22642 320 501 2.2E-257 T 23-04-2016 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 SUPERFAMILY SSF51556 481 567 5.68E-199 T 23-04-2016 IPR032466 Metal-dependent hydrolase CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 SUPERFAMILY SSF51556 129 432 5.68E-199 T 23-04-2016 IPR032466 Metal-dependent hydrolase CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 23-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 Gene3D G3DSA:2.30.40.10 68 143 7.8E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 23-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.888 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 Pfam PF01979 Amidohydrolase family 125 453 3.6E-81 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 SUPERFAMILY SSF51338 422 477 6.48E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 SUPERFAMILY SSF51338 1 177 1.26E-64 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 567 1.8E-294 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 4.3E-35 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 4.3E-35 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 4.3E-35 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 4.3E-35 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 PANTHER PTHR22642:SF7 25 296 2.2E-257 T 23-04-2016 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 PANTHER PTHR22642:SF7 320 501 2.2E-257 T 23-04-2016 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 Gene3D G3DSA:3.20.20.140 488 565 1.9E-211 T 23-04-2016 CYCME_RS00070 e4f2eefa7496d64fb1e41143173f51b1 567 Gene3D G3DSA:3.20.20.140 144 429 1.9E-211 T 23-04-2016 CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 Pfam PF00106 short chain dehydrogenase 8 193 1.2E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PANTHER PTHR24322:SF513 12 136 6.5E-38 T 23-04-2016 CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PANTHER PTHR24322:SF513 152 184 6.5E-38 T 23-04-2016 CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 SUPERFAMILY SSF51735 1 245 2.25E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PANTHER PTHR24322 12 136 6.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PANTHER PTHR24322 152 184 6.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 Gene3D G3DSA:3.40.50.720 7 248 6.9E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09435 2c0b76d29d8ca64e9ad42c16d037b156 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-20 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12435 35efc3f9fd005502bde30e717175b5dd 161 SUPERFAMILY SSF54427 9 159 5.85E-20 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS12435 35efc3f9fd005502bde30e717175b5dd 161 Gene3D G3DSA:3.10.450.50 6 154 3.5E-16 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS12435 35efc3f9fd005502bde30e717175b5dd 161 Pfam PF00866 Ring hydroxylating beta subunit 22 154 4.9E-13 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.8E-95 T 23-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 PANTHER PTHR11670 305 859 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 SUPERFAMILY SSF52016 162 372 5.89E-68 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 PANTHER PTHR11670:SF39 305 859 0.0 T 23-04-2016 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 SUPERFAMILY SSF74778 2 159 3.01E-66 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 Gene3D G3DSA:3.30.499.10 403 519 1.1E-62 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 Pfam PF00330 Aconitase family (aconitate hydratase) 473 818 9.8E-39 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 Gene3D G3DSA:3.20.19.10 162 360 2.3E-90 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 Gene3D G3DSA:3.30.499.10 683 860 1.1E-53 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 PIRSF PIRSF036687 1 859 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 SUPERFAMILY SSF53732 378 856 1.23E-147 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 5.9E-65 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CYCME_RS07300 a2a5e758e7718b5ebcd7a7ab72325090 865 Gene3D G3DSA:3.40.1060.10 520 682 1.6E-82 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS04125 d67225d24f6e5961380a95b4fd41977e 331 Gene3D G3DSA:3.40.250.10 102 228 2.5E-41 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS04125 d67225d24f6e5961380a95b4fd41977e 331 SUPERFAMILY SSF52821 97 241 8.64E-33 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS04125 d67225d24f6e5961380a95b4fd41977e 331 Pfam PF00581 Rhodanese-like domain 119 212 2.1E-9 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS04125 d67225d24f6e5961380a95b4fd41977e 331 PANTHER PTHR22778:SF12 3 292 8.7E-109 T 23-04-2016 CYCME_RS04125 d67225d24f6e5961380a95b4fd41977e 331 Hamap MF_00469 UPF0176 protein YceA [yceA]. 4 256 45.339 T 23-04-2016 IPR020936 Uncharacterised protein family UPF0176 CYCME_RS04125 d67225d24f6e5961380a95b4fd41977e 331 PANTHER PTHR22778 3 292 8.7E-109 T 23-04-2016 CYCME_RS04125 d67225d24f6e5961380a95b4fd41977e 331 SMART SM00450 115 216 8.7E-23 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS09865 1d801a59a573d85e82217d567332a5e0 195 PANTHER PTHR34606:SF4 8 195 1.1E-42 T 23-04-2016 CYCME_RS09865 1d801a59a573d85e82217d567332a5e0 195 Pfam PF04972 BON domain 68 114 4.7E-8 T 23-04-2016 IPR007055 BON domain CYCME_RS09865 1d801a59a573d85e82217d567332a5e0 195 Pfam PF04972 BON domain 140 194 4.3E-6 T 23-04-2016 IPR007055 BON domain CYCME_RS09865 1d801a59a573d85e82217d567332a5e0 195 PANTHER PTHR34606 8 195 1.1E-42 T 23-04-2016 CYCME_RS10395 0b1a5f48d633413c6ebd9a5fde8e9002 481 Gene3D G3DSA:3.40.309.10 262 445 1.5E-66 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CYCME_RS10395 0b1a5f48d633413c6ebd9a5fde8e9002 481 Gene3D G3DSA:3.40.605.10 3 261 2.1E-85 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS10395 0b1a5f48d633413c6ebd9a5fde8e9002 481 Pfam PF00171 Aldehyde dehydrogenase family 16 470 3.0E-156 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS10395 0b1a5f48d633413c6ebd9a5fde8e9002 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS10395 0b1a5f48d633413c6ebd9a5fde8e9002 481 SUPERFAMILY SSF53720 2 476 1.07E-155 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS10395 0b1a5f48d633413c6ebd9a5fde8e9002 481 PANTHER PTHR11699 1 475 4.4E-197 T 23-04-2016 CYCME_RS10395 0b1a5f48d633413c6ebd9a5fde8e9002 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS11245 9eb7761297e1d3f526cc9aa10eace7f4 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 125 6.0E-9 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS11245 9eb7761297e1d3f526cc9aa10eace7f4 131 SUPERFAMILY SSF54593 4 129 5.78E-26 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS11245 9eb7761297e1d3f526cc9aa10eace7f4 131 ProSitePatterns PS00934 Glyoxalase I signature 1. 9 29 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 CYCME_RS11245 9eb7761297e1d3f526cc9aa10eace7f4 131 Gene3D G3DSA:3.10.180.10 8 129 2.6E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS12350 6bb868cf178b796cb8a88a977756eb28 139 Gene3D G3DSA:3.40.630.30 13 138 5.9E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS12350 6bb868cf178b796cb8a88a977756eb28 139 PANTHER PTHR13355 15 139 3.9E-29 T 23-04-2016 CYCME_RS12350 6bb868cf178b796cb8a88a977756eb28 139 SUPERFAMILY SSF55729 15 138 2.23E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS12350 6bb868cf178b796cb8a88a977756eb28 139 Pfam PF13673 Acetyltransferase (GNAT) domain 21 138 1.7E-22 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CYCME_RS12350 6bb868cf178b796cb8a88a977756eb28 139 PANTHER PTHR13355:SF8 15 139 3.9E-29 T 23-04-2016 CYCME_RS07490 5ce8e079f81ba7e4a45af54f187ca124 413 PIRSF PIRSF005572 30 412 9.2E-49 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CYCME_RS07490 5ce8e079f81ba7e4a45af54f187ca124 413 SUPERFAMILY SSF53383 11 409 9.68E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS07490 5ce8e079f81ba7e4a45af54f187ca124 413 Gene3D G3DSA:3.90.1150.10 291 407 1.0E-28 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS07490 5ce8e079f81ba7e4a45af54f187ca124 413 Pfam PF00266 Aminotransferase class-V 33 401 1.6E-150 T 23-04-2016 IPR000192 Aminotransferase class V domain CYCME_RS07490 5ce8e079f81ba7e4a45af54f187ca124 413 PANTHER PTHR11601:SF17 14 412 1.5E-190 T 23-04-2016 CYCME_RS07490 5ce8e079f81ba7e4a45af54f187ca124 413 PANTHER PTHR11601 14 412 1.5E-190 T 23-04-2016 CYCME_RS07490 5ce8e079f81ba7e4a45af54f187ca124 413 Gene3D G3DSA:3.40.640.10 44 290 1.4E-85 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS07490 5ce8e079f81ba7e4a45af54f187ca124 413 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 15 412 1.2E-181 T 23-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CYCME_RS00920 055cec7cbba4b1dc31bc1b5144388dff 396 PANTHER PTHR23537 14 391 2.6E-40 T 23-04-2016 CYCME_RS00920 055cec7cbba4b1dc31bc1b5144388dff 396 Gene3D G3DSA:1.20.1250.20 14 188 4.1E-20 T 23-04-2016 CYCME_RS00920 055cec7cbba4b1dc31bc1b5144388dff 396 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 19 378 1.4E-70 T 23-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB CYCME_RS00920 055cec7cbba4b1dc31bc1b5144388dff 396 Gene3D G3DSA:1.20.1250.20 207 383 7.2E-17 T 23-04-2016 CYCME_RS00920 055cec7cbba4b1dc31bc1b5144388dff 396 PANTHER PTHR23537:SF1 14 391 2.6E-40 T 23-04-2016 CYCME_RS00920 055cec7cbba4b1dc31bc1b5144388dff 396 SUPERFAMILY SSF103473 6 384 1.01E-42 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 SUPERFAMILY SSF52518 15 214 4.88E-18 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 Gene3D G3DSA:3.40.920.10 719 911 5.9E-10 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 SUPERFAMILY SSF52922 265 355 2.33E-7 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 724 910 1.2E-19 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 467 600 2.0E-7 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 PANTHER PTHR18968:SF134 573 752 2.6E-136 T 23-04-2016 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 PANTHER PTHR18968:SF134 19 555 2.6E-136 T 23-04-2016 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 PANTHER PTHR18968 573 752 2.6E-136 T 23-04-2016 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 PANTHER PTHR18968 19 555 2.6E-136 T 23-04-2016 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 Gene3D G3DSA:3.40.50.970 11 215 7.4E-9 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 SUPERFAMILY SSF52518 426 621 4.81E-14 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 SUPERFAMILY SSF53323 715 923 1.14E-18 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CYCME_RS05510 83bf3c907fe8d98489b4fbe3a14dea51 1161 Gene3D G3DSA:3.40.50.970 487 644 4.3E-15 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 4.8E-61 T 23-04-2016 CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 Gene3D G3DSA:3.40.50.720 2 245 4.8E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 5 245 3.5E-109 T 23-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PANTHER PTHR24322 43 138 1.2E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PANTHER PTHR24322 154 186 1.2E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PANTHER PTHR24322 8 27 1.2E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 SUPERFAMILY SSF51735 4 244 4.71E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.5E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PANTHER PTHR24322:SF559 43 138 1.2E-53 T 23-04-2016 CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PANTHER PTHR24322:SF559 154 186 1.2E-53 T 23-04-2016 CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PANTHER PTHR24322:SF559 8 27 1.2E-53 T 23-04-2016 CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.6E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.6E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.6E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.6E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.6E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.6E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS04680 5bc8050126a36048f60fca86476b0c59 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 185 2.6E-5 T 23-04-2016 CYCME_RS01000 a840617422ceaf3181f57001af25f09f 362 SUPERFAMILY SSF53850 141 270 6.24E-5 T 23-04-2016 CYCME_RS01000 a840617422ceaf3181f57001af25f09f 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 324 8.1E-60 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CYCME_RS01000 a840617422ceaf3181f57001af25f09f 362 PANTHER PTHR33376 1 345 1.8E-141 T 23-04-2016 CYCME_RS01000 a840617422ceaf3181f57001af25f09f 362 PIRSF PIRSF039026 1 359 8.3E-141 T 23-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like CYCME_RS01000 a840617422ceaf3181f57001af25f09f 362 PANTHER PTHR33376:SF5 1 345 1.8E-141 T 23-04-2016 CYCME_RS10890 3eecf7b435dfdf4fab4c5037fd56795d 105 PANTHER PTHR33751 8 102 2.6E-14 T 23-04-2016 CYCME_RS10890 3eecf7b435dfdf4fab4c5037fd56795d 105 Pfam PF00034 Cytochrome c 33 102 9.2E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS10890 3eecf7b435dfdf4fab4c5037fd56795d 105 PANTHER PTHR33751:SF3 8 102 2.6E-14 T 23-04-2016 CYCME_RS10890 3eecf7b435dfdf4fab4c5037fd56795d 105 Gene3D G3DSA:1.10.760.10 23 102 8.7E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS10890 3eecf7b435dfdf4fab4c5037fd56795d 105 SUPERFAMILY SSF46626 15 101 8.6E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS10640 f696a32b8b1ab0e903130da2c6a5f1f7 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 27 87 4.3E-13 T 23-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 CYCME_RS10640 f696a32b8b1ab0e903130da2c6a5f1f7 91 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 13 87 2.5E-27 T 23-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 3.8E-113 T 23-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 5.2E-64 T 23-04-2016 CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.4E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.4E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.4E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 Gene3D G3DSA:3.40.50.720 2 244 5.4E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 SUPERFAMILY SSF51735 4 244 5.14E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PANTHER PTHR24322 8 136 3.5E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PANTHER PTHR24322 152 184 3.5E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 5.7E-5 T 23-04-2016 CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.0E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.0E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.0E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.0E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.0E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PANTHER PTHR24322:SF559 8 136 3.5E-65 T 23-04-2016 CYCME_RS09960 ba6eb19b98d29b7f5a0dc81f6cbf1a72 245 PANTHER PTHR24322:SF559 152 184 3.5E-65 T 23-04-2016 CYCME_RS07495 aa8804159215557afd6d37d21410c54f 443 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 408 1.8E-68 T 23-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CYCME_RS07495 aa8804159215557afd6d37d21410c54f 443 SUPERFAMILY SSF101960 26 429 1.26E-103 T 23-04-2016 CYCME_RS07495 aa8804159215557afd6d37d21410c54f 443 PANTHER PTHR30508 28 433 3.0E-123 T 23-04-2016 CYCME_RS07495 aa8804159215557afd6d37d21410c54f 443 PANTHER PTHR30508:SF0 28 433 3.0E-123 T 23-04-2016 CYCME_RS07495 aa8804159215557afd6d37d21410c54f 443 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 150 423 9.8E-80 T 23-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.725 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 PIRSF PIRSF006641 1 363 2.8E-155 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 SUPERFAMILY SSF52540 3 301 1.73E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.0E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.0E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.0E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.0E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 SUPERFAMILY SSF81271 279 360 3.05E-36 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 PANTHER PTHR23305 1 363 1.9E-200 T 23-04-2016 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 Gene3D G3DSA:1.10.150.300 131 200 5.6E-20 T 23-04-2016 IPR023192 TGS-like domain CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 6.9E-159 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 Gene3D G3DSA:3.40.50.300 201 266 2.4E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 Gene3D G3DSA:3.40.50.300 3 130 2.4E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.5E-40 T 23-04-2016 IPR013029 Domain of unknown function DUF933 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 PANTHER PTHR23305:SF12 1 363 1.9E-200 T 23-04-2016 CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 Gene3D G3DSA:3.10.20.30 267 363 1.2E-50 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS11295 e82abc1d60af0a15ea87bfc44f91c226 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 7.2E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS04820 2bec998fb2ce280f7daab8ae1d3b0ca8 284 Gene3D G3DSA:3.40.1350.10 142 261 1.9E-19 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CYCME_RS04820 2bec998fb2ce280f7daab8ae1d3b0ca8 284 PANTHER PTHR30015 1 268 9.2E-34 T 23-04-2016 CYCME_RS04820 2bec998fb2ce280f7daab8ae1d3b0ca8 284 Pfam PF14338 Mrr N-terminal domain 4 89 7.7E-22 T 23-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain CYCME_RS04820 2bec998fb2ce280f7daab8ae1d3b0ca8 284 Pfam PF04471 Restriction endonuclease 142 257 1.7E-33 T 23-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 CYCME_RS04820 2bec998fb2ce280f7daab8ae1d3b0ca8 284 SUPERFAMILY SSF52980 147 260 4.13E-14 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CYCME_RS04820 2bec998fb2ce280f7daab8ae1d3b0ca8 284 PANTHER PTHR30015:SF4 1 268 9.2E-34 T 23-04-2016 CYCME_RS02425 345ee3b577c4731add12bad20d9b141f 242 PANTHER PTHR30028 5 234 9.2E-51 T 23-04-2016 CYCME_RS02425 345ee3b577c4731add12bad20d9b141f 242 PANTHER PTHR30028:SF0 5 234 9.2E-51 T 23-04-2016 IPR005226 UPF0014 family CYCME_RS02425 345ee3b577c4731add12bad20d9b141f 242 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 230 2.6E-53 T 23-04-2016 IPR005226 UPF0014 family CYCME_RS00930 a2ee0f826c2eec917d5c16b122609894 150 SUPERFAMILY SSF69500 1 144 1.44E-48 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain CYCME_RS00930 a2ee0f826c2eec917d5c16b122609894 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 30.697 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CYCME_RS00930 a2ee0f826c2eec917d5c16b122609894 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 2.5E-45 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CYCME_RS00930 a2ee0f826c2eec917d5c16b122609894 150 Gene3D G3DSA:3.50.80.10 1 144 4.9E-49 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain CYCME_RS00930 a2ee0f826c2eec917d5c16b122609894 150 PANTHER PTHR10472 3 149 1.5E-53 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CYCME_RS00930 a2ee0f826c2eec917d5c16b122609894 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 2.5E-49 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 CYCME_RS05615 2e5aa4dfc51c74e4d7208598b9cf8b42 108 Gene3D G3DSA:1.25.40.280 17 106 2.4E-4 T 23-04-2016 IPR004328 BRO1 domain CYCME_RS05615 2e5aa4dfc51c74e4d7208598b9cf8b42 108 Pfam PF07813 LTXXQ motif family protein 38 91 4.0E-6 T 23-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Gene3D G3DSA:3.90.199.10 34 216 6.4E-84 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 PANTHER PTHR10169 2 410 0.0 T 23-04-2016 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 PANTHER PTHR10169 451 814 0.0 T 23-04-2016 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 PANTHER PTHR10169:SF48 2 410 0.0 T 23-04-2016 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 PANTHER PTHR10169:SF48 451 814 0.0 T 23-04-2016 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 585 3.2E-8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 694 738 3.2E-12 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 689 1.4E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 638 5.2E-7 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 838 5.2E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 1.8E-14 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 SUPERFAMILY SSF56719 30 523 1.28E-179 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Gene3D G3DSA:1.10.268.10 364 498 2.8E-45 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 840 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Gene3D G3DSA:3.30.1360.40 236 334 8.2E-37 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Gene3D G3DSA:2.120.10.90 532 839 1.9E-133 T 23-04-2016 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 SUPERFAMILY SSF101904 534 854 3.14E-110 T 23-04-2016 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 SMART SM00434 11 500 8.1E-281 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 2.6E-151 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS09295 5e16f6bdb095f4f401ef02c2871ab2dc 858 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 846 29.245 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS08035 5ad8480faffc1eec796b0062948ebebc 275 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 69 239 7.0E-32 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CYCME_RS08035 5ad8480faffc1eec796b0062948ebebc 275 PANTHER PTHR10000 65 275 1.7E-77 T 23-04-2016 CYCME_RS08035 5ad8480faffc1eec796b0062948ebebc 275 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 64 273 2.9E-73 T 23-04-2016 CYCME_RS08035 5ad8480faffc1eec796b0062948ebebc 275 Gene3D G3DSA:1.10.150.210 79 129 6.9E-25 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 CYCME_RS08035 5ad8480faffc1eec796b0062948ebebc 275 SUPERFAMILY SSF56784 67 274 4.14E-51 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS08035 5ad8480faffc1eec796b0062948ebebc 275 PANTHER PTHR10000:SF7 65 275 1.7E-77 T 23-04-2016 CYCME_RS08035 5ad8480faffc1eec796b0062948ebebc 275 Pfam PF12710 haloacid dehalogenase-like hydrolase 70 238 6.1E-16 T 23-04-2016 CYCME_RS08035 5ad8480faffc1eec796b0062948ebebc 275 Gene3D G3DSA:3.40.50.1000 130 269 4.7E-35 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS09340 ab758fbf50d6cf2eee24201c9aec2164 301 Pfam PF00892 EamA-like transporter family 8 141 2.7E-20 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS09340 ab758fbf50d6cf2eee24201c9aec2164 301 Pfam PF00892 EamA-like transporter family 156 291 7.2E-22 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS09340 ab758fbf50d6cf2eee24201c9aec2164 301 SUPERFAMILY SSF103481 216 295 4.45E-13 T 23-04-2016 CYCME_RS09340 ab758fbf50d6cf2eee24201c9aec2164 301 SUPERFAMILY SSF103481 42 145 4.32E-12 T 23-04-2016 CYCME_RS09340 ab758fbf50d6cf2eee24201c9aec2164 301 PANTHER PTHR12715 1 295 1.0E-55 T 23-04-2016 CYCME_RS05920 01227d4ba5644594ea2d604efb4afa06 539 SUPERFAMILY SSF52096 237 518 2.83E-74 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05920 01227d4ba5644594ea2d604efb4afa06 539 Gene3D G3DSA:3.90.226.10 22 270 5.5E-52 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05920 01227d4ba5644594ea2d604efb4afa06 539 Gene3D G3DSA:3.90.226.10 278 528 2.8E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05920 01227d4ba5644594ea2d604efb4afa06 539 PANTHER PTHR22855 1 539 6.3E-248 T 23-04-2016 CYCME_RS05920 01227d4ba5644594ea2d604efb4afa06 539 PANTHER PTHR22855:SF29 1 539 6.3E-248 T 23-04-2016 CYCME_RS05920 01227d4ba5644594ea2d604efb4afa06 539 Pfam PF01039 Carboxyl transferase domain 49 525 8.9E-113 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CYCME_RS05920 01227d4ba5644594ea2d604efb4afa06 539 SUPERFAMILY SSF52096 21 270 2.49E-56 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS09190 f291fc6a9fc0e0865d4f1e95c4425c8c 275 SUPERFAMILY SSF52096 8 274 1.51E-78 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS09190 f291fc6a9fc0e0865d4f1e95c4425c8c 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 274 2.1E-53 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CYCME_RS09190 f291fc6a9fc0e0865d4f1e95c4425c8c 275 Gene3D G3DSA:3.90.226.10 10 274 1.3E-76 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS09190 f291fc6a9fc0e0865d4f1e95c4425c8c 275 PANTHER PTHR11941 4 273 9.9E-81 T 23-04-2016 CYCME_RS04815 c59165af6ee7355856457948bec11409 297 SUPERFAMILY SSF52768 20 289 9.18E-63 T 23-04-2016 CYCME_RS04815 c59165af6ee7355856457948bec11409 297 Gene3D G3DSA:3.40.800.10 13 289 4.6E-63 T 23-04-2016 IPR023696 Ureohydrolase domain CYCME_RS04815 c59165af6ee7355856457948bec11409 297 PANTHER PTHR11358:SF34 21 286 9.0E-77 T 23-04-2016 CYCME_RS04815 c59165af6ee7355856457948bec11409 297 TIGRFAM TIGR01230 agmatinase: agmatinase 19 287 5.4E-68 T 23-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 CYCME_RS04815 c59165af6ee7355856457948bec11409 297 ProSitePatterns PS01053 Arginase family signature. 217 238 - T 23-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 CYCME_RS04815 c59165af6ee7355856457948bec11409 297 PANTHER PTHR11358 21 286 9.0E-77 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 CYCME_RS04815 c59165af6ee7355856457948bec11409 297 Pfam PF00491 Arginase family 26 286 3.4E-63 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 CYCME_RS04815 c59165af6ee7355856457948bec11409 297 PIRSF PIRSF036979 6 293 4.8E-54 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 SUPERFAMILY SSF47384 193 274 3.14E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 Gene3D G3DSA:3.30.565.10 259 429 4.6E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 SMART SM00388 206 273 1.1E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 430 4.6E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 PANTHER PTHR24423 77 434 3.2E-91 T 23-04-2016 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 Gene3D G3DSA:1.10.287.130 198 258 1.2E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 SMART SM00387 318 431 2.4E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 Pfam PF11808 Domain of unknown function (DUF3329) 13 86 4.1E-13 T 23-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 SUPERFAMILY SSF55874 263 429 2.62E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 PANTHER PTHR24423:SF554 77 434 3.2E-91 T 23-04-2016 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 273 3.0E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 Gene3D G3DSA:3.30.450.20 94 197 5.1E-5 T 23-04-2016 CYCME_RS11490 34254693ee5dcd60572c94bc13d4a949 434 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 93 427 2.4E-107 T 23-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 SUPERFAMILY SSF46785 81 157 3.7E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 PIRSF PIRSF019345 1 203 1.1E-65 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 Gene3D G3DSA:1.10.10.10 81 157 1.0E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 3 175 1.2E-37 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 Gene3D G3DSA:1.10.10.10 2 79 1.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 PANTHER PTHR34298:SF2 1 199 2.2E-72 T 23-04-2016 CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 PANTHER PTHR34298 1 199 2.2E-72 T 23-04-2016 CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 Pfam PF04079 Segregation and condensation complex subunit ScpB 6 166 2.3E-53 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CYCME_RS08975 49d97c17c546d6330bea5d63f2194c3c 203 SUPERFAMILY SSF46785 2 80 1.2E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00235 53d31884f25a64c73380b625d4bbef05 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 251 1.1E-79 T 23-04-2016 CYCME_RS00235 53d31884f25a64c73380b625d4bbef05 258 Gene3D G3DSA:3.60.10.10 1 254 1.6E-94 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS00235 53d31884f25a64c73380b625d4bbef05 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 246 1.5E-25 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS00235 53d31884f25a64c73380b625d4bbef05 258 PANTHER PTHR22748 1 256 3.0E-107 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CYCME_RS00235 53d31884f25a64c73380b625d4bbef05 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 3.9E-85 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CYCME_RS00235 53d31884f25a64c73380b625d4bbef05 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CYCME_RS00235 53d31884f25a64c73380b625d4bbef05 258 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 214 225 - T 23-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CYCME_RS00235 53d31884f25a64c73380b625d4bbef05 258 SUPERFAMILY SSF56219 1 254 7.85E-79 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 SMART SM00994 14 53 6.1E-22 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 Gene3D G3DSA:3.40.50.300 68 255 2.0E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 Gene3D G3DSA:3.40.50.300 296 313 2.0E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 SUPERFAMILY SSF52540 64 402 6.63E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 412 2.2E-201 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 Pfam PF06689 ClpX C4-type zinc finger 16 52 6.1E-19 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 Gene3D G3DSA:1.10.8.60 318 420 9.9E-38 T 23-04-2016 CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 SMART SM01086 319 414 4.8E-33 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 4.3E-48 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 PANTHER PTHR11262 2 419 5.2E-241 T 23-04-2016 CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 8 417 52.326 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 SMART SM00382 113 274 2.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 392 5.4E-16 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CYCME_RS08085 b063b15cff6b31566d9258c89ef5f29a 425 SUPERFAMILY SSF57716 15 50 3.85E-11 T 23-04-2016 CYCME_RS00950 345b72562d478708312c7ebb58c0e7d2 276 PANTHER PTHR11863:SF2 11 226 3.9E-18 T 23-04-2016 CYCME_RS00950 345b72562d478708312c7ebb58c0e7d2 276 Pfam PF04116 Fatty acid hydroxylase superfamily 92 227 1.1E-26 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 CYCME_RS00950 345b72562d478708312c7ebb58c0e7d2 276 PANTHER PTHR11863 11 226 3.9E-18 T 23-04-2016 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PANTHER PTHR10520:SF7 3 280 2.8E-132 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 Pfam PF01842 ACT domain 8 65 2.8E-8 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 SUPERFAMILY SSF55021 6 89 5.34E-15 T 23-04-2016 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 286 1.5E-115 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PANTHER PTHR10520 3 280 2.8E-132 T 23-04-2016 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PIRSF PIRSF036480 4 287 9.2E-115 T 23-04-2016 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 SUPERFAMILY SSF53328 92 286 2.09E-60 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 Gene3D G3DSA:3.30.70.260 4 84 2.6E-19 T 23-04-2016 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 286 44.332 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 92 114 7.5E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 114 141 7.5E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 238 260 7.5E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 7.5E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 7.5E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 260 285 7.5E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 Gene3D G3DSA:3.40.50.170 90 281 1.0E-58 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS02750 2e21d5f1353e9a3950cf73954fa25e75 287 Pfam PF00551 Formyl transferase 92 268 7.6E-43 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 SUPERFAMILY SSF53335 145 438 4.14E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 Gene3D G3DSA:3.30.70.1170 177 234 2.9E-15 T 23-04-2016 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 12 437 2.5E-127 T 23-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 Gene3D G3DSA:1.10.940.10 8 152 2.4E-38 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 Gene3D G3DSA:3.40.50.150 238 437 2.0E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 PANTHER PTHR22807:SF30 31 438 3.4E-108 T 23-04-2016 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 Gene3D G3DSA:1.10.287.730 153 176 2.3E-4 T 23-04-2016 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 321 332 - T 23-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 372 388 2.4E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 322 334 2.4E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 226 240 2.4E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 255 265 2.4E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 420 437 2.4E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 PANTHER PTHR22807 31 438 3.4E-108 T 23-04-2016 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 Pfam PF01189 16S rRNA methyltransferase RsmB/F 244 435 1.6E-62 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 Pfam PF01029 NusB family 10 130 1.6E-23 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CYCME_RS01580 2f2ffb9613f17fd55305a13c856d4833 438 SUPERFAMILY SSF48013 9 153 1.05E-29 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CYCME_RS06375 d4d7e93d55194c680356eb0b6ecb9b5d 433 PANTHER PTHR30097 35 417 7.0E-89 T 23-04-2016 CYCME_RS06375 d4d7e93d55194c680356eb0b6ecb9b5d 433 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 103 325 9.4E-76 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CYCME_RS06375 d4d7e93d55194c680356eb0b6ecb9b5d 433 PANTHER PTHR30097:SF3 35 417 7.0E-89 T 23-04-2016 CYCME_RS06375 d4d7e93d55194c680356eb0b6ecb9b5d 433 Gene3D G3DSA:2.40.50.100 219 252 3.1E-7 T 23-04-2016 CYCME_RS06375 d4d7e93d55194c680356eb0b6ecb9b5d 433 Gene3D G3DSA:2.40.50.100 121 154 3.1E-7 T 23-04-2016 CYCME_RS06375 d4d7e93d55194c680356eb0b6ecb9b5d 433 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 114 404 2.8E-38 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS06375 d4d7e93d55194c680356eb0b6ecb9b5d 433 SUPERFAMILY SSF111369 118 330 1.96E-12 T 23-04-2016 CYCME_RS00290 68568a02427fa5f6ae82cc58ff0039ab 194 Gene3D G3DSA:3.30.70.60 93 193 8.3E-35 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CYCME_RS00290 68568a02427fa5f6ae82cc58ff0039ab 194 PANTHER PTHR39555:SF1 1 194 1.3E-43 T 23-04-2016 CYCME_RS00290 68568a02427fa5f6ae82cc58ff0039ab 194 PIRSF PIRSF016482 2 194 8.1E-57 T 23-04-2016 IPR007445 Pilus assembly protein, PilO CYCME_RS00290 68568a02427fa5f6ae82cc58ff0039ab 194 Pfam PF04350 Pilus assembly protein, PilO 48 190 3.9E-53 T 23-04-2016 IPR007445 Pilus assembly protein, PilO CYCME_RS00290 68568a02427fa5f6ae82cc58ff0039ab 194 PANTHER PTHR39555 1 194 1.3E-43 T 23-04-2016 CYCME_RS00290 68568a02427fa5f6ae82cc58ff0039ab 194 Gene3D G3DSA:1.10.287.540 58 92 1.6E-15 T 23-04-2016 IPR023218 UPF0291 structural domain CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 PANTHER PTHR30385:SF7 12 230 2.9E-58 T 23-04-2016 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 SUPERFAMILY SSF88659 92 163 4.36E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 18 230 1.4E-75 T 23-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 SUPERFAMILY SSF88659 161 233 1.35E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 Gene3D G3DSA:1.10.601.10 16 82 2.9E-12 T 23-04-2016 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 PRINTS PR00046 Major sigma-70 factor signature 200 215 2.7E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 PRINTS PR00046 Major sigma-70 factor signature 215 226 2.7E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 PRINTS PR00046 Major sigma-70 factor signature 45 58 2.7E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 PRINTS PR00046 Major sigma-70 factor signature 183 195 2.7E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 Gene3D G3DSA:1.10.10.10 91 138 1.4E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 SUPERFAMILY SSF88946 12 90 3.4E-21 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 4 233 63.873 T 23-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 230 1.0E-28 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 PANTHER PTHR30385 12 230 2.9E-58 T 23-04-2016 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 Gene3D G3DSA:1.10.10.10 176 230 5.5E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 Pfam PF04542 Sigma-70 region 2 18 91 3.4E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 Pfam PF04539 Sigma-70 region 3 98 156 6.9E-13 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04565 2cc4f13e2a5d3727d5da85521bc3d4f1 236 Pfam PF04545 Sigma-70, region 4 179 227 4.3E-16 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 23-04-2016 IPR025505 FHIPEP conserved site CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PIRSF PIRSF005419 5 696 8.0E-254 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 Pfam PF00771 FHIPEP family 27 684 3.9E-273 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PANTHER PTHR30161 1 695 0.0 T 23-04-2016 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 20 692 5.7E-273 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 2.5E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 2.5E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 2.5E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 2.5E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 2.5E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 2.5E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CYCME_RS04550 cdd65212c3123ab26ac38c159ff179c0 696 PANTHER PTHR30161:SF1 1 695 0.0 T 23-04-2016 CYCME_RS10795 25593eaedaa65f3929efb739db1315d5 221 Pfam PF01712 Deoxynucleoside kinase 15 205 8.1E-38 T 23-04-2016 IPR031314 Deoxynucleoside kinase domain CYCME_RS10795 25593eaedaa65f3929efb739db1315d5 221 PIRSF PIRSF000705 2 213 4.8E-55 T 23-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 CYCME_RS10795 25593eaedaa65f3929efb739db1315d5 221 SUPERFAMILY SSF52540 11 217 1.26E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10795 25593eaedaa65f3929efb739db1315d5 221 PANTHER PTHR10513 14 205 7.0E-47 T 23-04-2016 CYCME_RS10795 25593eaedaa65f3929efb739db1315d5 221 Gene3D G3DSA:3.40.50.300 12 206 1.9E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10795 25593eaedaa65f3929efb739db1315d5 221 PANTHER PTHR10513:SF16 14 205 7.0E-47 T 23-04-2016 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 PANTHER PTHR11390:SF27 1 751 0.0 T 23-04-2016 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 288 310 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Gene3D G3DSA:3.40.50.140 2 135 1.5E-46 T 23-04-2016 IPR006171 Toprim domain CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 SMART SM00437 251 523 2.6E-117 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 697 54.555 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Pfam PF01751 Toprim domain 4 116 7.1E-27 T 23-04-2016 IPR006171 Toprim domain CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 SMART SM00436 107 195 3.7E-50 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Gene3D G3DSA:2.70.20.10 189 323 4.1E-32 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Gene3D G3DSA:2.70.20.10 326 462 8.4E-32 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Gene3D G3DSA:3.30.65.10 588 625 2.7E-12 T 23-04-2016 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Gene3D G3DSA:3.30.65.10 631 674 8.9E-15 T 23-04-2016 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Gene3D G3DSA:3.30.65.10 678 715 7.1E-4 T 23-04-2016 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 SMART SM00493 2 102 5.7E-32 T 23-04-2016 IPR006171 Toprim domain CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 SUPERFAMILY SSF57783 631 674 9.52E-13 T 23-04-2016 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Pfam PF01131 DNA topoisomerase 131 560 2.8E-128 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 590 626 2.8E-15 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 681 719 3.5E-12 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 638 675 1.5E-15 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Gene3D G3DSA:1.10.460.10 463 573 2.0E-59 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 Gene3D G3DSA:1.10.460.10 136 188 2.0E-59 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 PANTHER PTHR11390 1 751 0.0 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 624 1.6E-246 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 379 395 6.5E-36 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 486 500 6.5E-36 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 165 183 6.5E-36 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 301 310 6.5E-36 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 6.5E-36 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 SUPERFAMILY SSF56712 2 602 7.06E-193 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain CYCME_RS01610 3b47491a2a606ee89669bd02d945ac0e 763 SUPERFAMILY SSF57783 588 625 7.99E-11 T 23-04-2016 CYCME_RS00045 e0a1e5beb99700b8dea3f21c0b636ca5 285 Pfam PF00005 ABC transporter 61 215 1.7E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS00045 e0a1e5beb99700b8dea3f21c0b636ca5 285 Gene3D G3DSA:3.40.50.300 41 282 1.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00045 e0a1e5beb99700b8dea3f21c0b636ca5 285 PANTHER PTHR24220:SF366 46 284 5.7E-131 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CYCME_RS00045 e0a1e5beb99700b8dea3f21c0b636ca5 285 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 44 284 1.3E-119 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CYCME_RS00045 e0a1e5beb99700b8dea3f21c0b636ca5 285 SUPERFAMILY SSF52540 43 283 4.13E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00045 e0a1e5beb99700b8dea3f21c0b636ca5 285 SMART SM00382 69 262 0.0017 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00045 e0a1e5beb99700b8dea3f21c0b636ca5 285 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 284 9.4E-10 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CYCME_RS00045 e0a1e5beb99700b8dea3f21c0b636ca5 285 PANTHER PTHR24220 46 284 5.7E-131 T 23-04-2016 CYCME_RS12525 a58718659fb905431513267711553aaf 545 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 539 23.996 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PANTHER PTHR12428:SF14 176 540 2.4E-106 T 23-04-2016 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 420 443 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 256 271 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 503 526 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 223 241 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 82 103 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 329 349 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 467 489 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR00701 60kDa inner membrane protein signature 169 189 4.7E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR01900 YidC translocation/secretion protein signature 344 360 4.1E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR01900 YidC translocation/secretion protein signature 492 516 4.1E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 PRINTS PR01900 YidC translocation/secretion protein signature 473 488 4.1E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 Pfam PF14849 YidC periplasmic domain 77 348 8.0E-83 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal CYCME_RS12525 a58718659fb905431513267711553aaf 545 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 357 3.3E-109 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal CYCME_RS12525 a58718659fb905431513267711553aaf 545 Pfam PF02096 60Kd inner membrane protein 359 537 3.8E-59 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS12525 a58718659fb905431513267711553aaf 545 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 358 537 3.7E-69 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CYCME_RS12525 a58718659fb905431513267711553aaf 545 PANTHER PTHR12428 176 540 2.4E-106 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CYCME_RS03865 d62b1c64e20a6de8660f8146c7175b5a 269 Pfam PF01061 ABC-2 type transporter 11 228 2.6E-30 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 CYCME_RS03865 d62b1c64e20a6de8660f8146c7175b5a 269 PANTHER PTHR30294 13 269 6.0E-86 T 23-04-2016 CYCME_RS03865 d62b1c64e20a6de8660f8146c7175b5a 269 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 8 259 2.9E-120 T 23-04-2016 IPR022403 Alcohol ABC transporter, permease protein CYCME_RS03865 d62b1c64e20a6de8660f8146c7175b5a 269 PIRSF PIRSF006648 6 258 2.7E-35 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS03865 d62b1c64e20a6de8660f8146c7175b5a 269 PANTHER PTHR30294:SF13 13 269 6.0E-86 T 23-04-2016 CYCME_RS03865 d62b1c64e20a6de8660f8146c7175b5a 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 28 49 9.1E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS03865 d62b1c64e20a6de8660f8146c7175b5a 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 9.1E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS03865 d62b1c64e20a6de8660f8146c7175b5a 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 145 169 9.1E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS09475 841c886b818f02a450cf4fc2af77304a 353 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 320 3.3E-53 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CYCME_RS09475 841c886b818f02a450cf4fc2af77304a 353 PIRSF PIRSF039012 1 327 1.6E-79 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CYCME_RS09475 841c886b818f02a450cf4fc2af77304a 353 Gene3D G3DSA:3.40.630.10 29 228 2.3E-24 T 23-04-2016 CYCME_RS09475 841c886b818f02a450cf4fc2af77304a 353 PANTHER PTHR37326:SF1 5 339 3.5E-98 T 23-04-2016 CYCME_RS09475 841c886b818f02a450cf4fc2af77304a 353 SUPERFAMILY SSF53187 23 321 2.08E-69 T 23-04-2016 CYCME_RS09475 841c886b818f02a450cf4fc2af77304a 353 PANTHER PTHR37326 5 339 3.5E-98 T 23-04-2016 CYCME_RS03065 2f31da513b03120f37929298479e8edc 295 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 6 289 28.871 T 23-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 CYCME_RS03065 2f31da513b03120f37929298479e8edc 295 PANTHER PTHR11048:SF7 4 291 2.9E-78 T 23-04-2016 CYCME_RS03065 2f31da513b03120f37929298479e8edc 295 PANTHER PTHR11048 4 291 2.9E-78 T 23-04-2016 CYCME_RS03065 2f31da513b03120f37929298479e8edc 295 Pfam PF01040 UbiA prenyltransferase family 29 271 1.0E-59 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CYCME_RS03065 2f31da513b03120f37929298479e8edc 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 68 90 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site CYCME_RS03065 2f31da513b03120f37929298479e8edc 295 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 12 288 8.1E-100 T 23-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 CYCME_RS08385 9794fe5bd814c5843f90fc97018f30b4 83 Gene3D G3DSA:3.30.1320.10 1 78 7.2E-33 T 23-04-2016 IPR023803 Ribosomal protein S16 domain CYCME_RS08385 9794fe5bd814c5843f90fc97018f30b4 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 23-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08385 9794fe5bd814c5843f90fc97018f30b4 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 2.5E-30 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08385 9794fe5bd814c5843f90fc97018f30b4 83 SUPERFAMILY SSF54565 1 78 1.03E-29 T 23-04-2016 IPR023803 Ribosomal protein S16 domain CYCME_RS08385 9794fe5bd814c5843f90fc97018f30b4 83 PANTHER PTHR12919 1 78 3.7E-39 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08385 9794fe5bd814c5843f90fc97018f30b4 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.804 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08385 9794fe5bd814c5843f90fc97018f30b4 83 Pfam PF00886 Ribosomal protein S16 8 68 2.1E-24 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS07890 e23281f40528fecc20e7e0297f293579 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 3.0E-37 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CYCME_RS07890 e23281f40528fecc20e7e0297f293579 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 285 5.1E-15 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CYCME_RS07890 e23281f40528fecc20e7e0297f293579 298 PANTHER PTHR22981 3 286 4.6E-60 T 23-04-2016 CYCME_RS07890 e23281f40528fecc20e7e0297f293579 298 SUPERFAMILY SSF51735 3 163 9.52E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07890 e23281f40528fecc20e7e0297f293579 298 SUPERFAMILY SSF48179 165 288 2.27E-23 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS07890 e23281f40528fecc20e7e0297f293579 298 PIRSF PIRSF000103 1 293 1.3E-60 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 CYCME_RS07890 e23281f40528fecc20e7e0297f293579 298 Gene3D G3DSA:3.40.50.720 4 164 1.3E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07890 e23281f40528fecc20e7e0297f293579 298 Gene3D G3DSA:1.10.1040.10 166 289 7.6E-24 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 Gene3D G3DSA:3.30.450.40 138 306 6.0E-9 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 SUPERFAMILY SSF55781 161 307 1.3E-11 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 Gene3D G3DSA:3.30.70.270 309 468 1.2E-50 T 23-04-2016 CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 Pfam PF00989 PAS fold 26 135 4.1E-12 T 23-04-2016 IPR013767 PAS fold GO:0006355 CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 Gene3D G3DSA:3.30.450.20 23 134 3.7E-15 T 23-04-2016 CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 134 6.2E-14 T 23-04-2016 IPR000014 PAS domain CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 SMART SM00091 24 89 7.7E-6 T 23-04-2016 IPR000014 PAS domain CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 SMART SM00267 296 468 5.8E-54 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 Pfam PF00990 Diguanylate cyclase, GGDEF domain 307 464 3.9E-42 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 Pfam PF01590 GAF domain 207 289 1.6E-5 T 23-04-2016 IPR003018 GAF domain GO:0005515 CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 PANTHER PTHR10799:SF686 279 468 1.4E-24 T 23-04-2016 CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 PANTHER PTHR10799 279 468 1.4E-24 T 23-04-2016 CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 467 1.0E-47 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 SUPERFAMILY SSF55785 24 131 6.11E-15 T 23-04-2016 IPR000014 PAS domain CYCME_RS07745 b1ccbbc07d2079a30f115c8322575bcb 472 SUPERFAMILY SSF55073 312 468 2.12E-45 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS08410 1328470d1ffa00d7c15dea171805dd6a 63 SUPERFAMILY SSF158997 1 55 6.28E-20 T 23-04-2016 CYCME_RS08410 1328470d1ffa00d7c15dea171805dd6a 63 Gene3D G3DSA:2.20.25.10 8 59 7.5E-23 T 23-04-2016 CYCME_RS08410 1328470d1ffa00d7c15dea171805dd6a 63 PANTHER PTHR33505 1 60 2.1E-20 T 23-04-2016 CYCME_RS08410 1328470d1ffa00d7c15dea171805dd6a 63 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.031 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 CYCME_RS08410 1328470d1ffa00d7c15dea171805dd6a 63 Pfam PF03966 Trm112p-like protein 2 40 3.0E-9 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 Gene3D G3DSA:3.40.190.80 156 258 6.7E-41 T 23-04-2016 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.0E-8 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 1.0E-8 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 137 160 1.0E-8 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 1.0E-8 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 Gene3D G3DSA:3.30.540.10 10 155 2.0E-44 T 23-04-2016 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 Pfam PF00459 Inositol monophosphatase family 11 249 3.2E-52 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 258 2.6E-87 T 23-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 PANTHER PTHR20854:SF5 7 257 1.2E-76 T 23-04-2016 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 PANTHER PTHR20854 7 257 1.2E-76 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CYCME_RS02155 aa82de7289be12c3ae64b98be89280a1 261 SUPERFAMILY SSF56655 10 257 1.57E-68 T 23-04-2016 CYCME_RS06435 9b102f12f16eb05fa5fb1651eab1028b 117 SUPERFAMILY SSF49503 15 117 2.47E-16 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06435 9b102f12f16eb05fa5fb1651eab1028b 117 Pfam PF13473 Cupredoxin-like domain 11 116 4.1E-27 T 23-04-2016 IPR028096 EfeO-type cupredoxin-like domain CYCME_RS06435 9b102f12f16eb05fa5fb1651eab1028b 117 Gene3D G3DSA:2.60.40.420 25 116 4.8E-11 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS07790 4cc75a0f5579ec72a221cc2f0bee933a 328 PANTHER PTHR22550:SF12 1 325 2.6E-127 T 23-04-2016 CYCME_RS07790 4cc75a0f5579ec72a221cc2f0bee933a 328 SUPERFAMILY SSF53300 87 268 1.29E-37 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS07790 4cc75a0f5579ec72a221cc2f0bee933a 328 Gene3D G3DSA:3.40.50.410 88 285 4.9E-24 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS07790 4cc75a0f5579ec72a221cc2f0bee933a 328 Pfam PF00092 von Willebrand factor type A domain 90 284 2.2E-28 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS07790 4cc75a0f5579ec72a221cc2f0bee933a 328 PANTHER PTHR22550 1 325 2.6E-127 T 23-04-2016 CYCME_RS07790 4cc75a0f5579ec72a221cc2f0bee933a 328 SMART SM00327 88 290 2.1E-19 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS04650 c8edcee64692d913af07344f6e157e48 282 Pfam PF02666 Phosphatidylserine decarboxylase 62 278 7.2E-60 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CYCME_RS04650 c8edcee64692d913af07344f6e157e48 282 PANTHER PTHR10067 6 282 2.5E-100 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CYCME_RS04650 c8edcee64692d913af07344f6e157e48 282 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 279 4.5E-72 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CYCME_RS04650 c8edcee64692d913af07344f6e157e48 282 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 281 43.82 T 23-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CYCME_RS05450 47d620de2b2ef48ed4b1a9dfc0c45f44 765 PANTHER PTHR11614:SF89 518 760 1.9E-21 T 23-04-2016 CYCME_RS05450 47d620de2b2ef48ed4b1a9dfc0c45f44 765 SUPERFAMILY SSF53474 525 760 1.01E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS05450 47d620de2b2ef48ed4b1a9dfc0c45f44 765 PANTHER PTHR11614 518 760 1.9E-21 T 23-04-2016 CYCME_RS05450 47d620de2b2ef48ed4b1a9dfc0c45f44 765 Pfam PF12146 Serine aminopeptidase, S33 529 748 2.8E-19 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 CYCME_RS05450 47d620de2b2ef48ed4b1a9dfc0c45f44 765 Gene3D G3DSA:3.40.50.1820 516 760 3.4E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 SUPERFAMILY SSF46557 12 84 6.8E-20 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 162 26.072 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 Pfam PF03449 Transcription elongation factor, N-terminal 14 78 1.7E-20 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 PANTHER PTHR30437 1 164 2.5E-70 T 23-04-2016 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 PANTHER PTHR30437:SF6 1 164 2.5E-70 T 23-04-2016 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 PIRSF PIRSF006092 8 164 7.4E-44 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 163 1.9E-56 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 163 6.3E-24 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 Gene3D G3DSA:3.10.50.30 84 163 6.0E-27 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 164 44.985 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 SUPERFAMILY SSF54534 91 163 4.84E-20 T 23-04-2016 CYCME_RS10710 0b4dbeb2a4cb429b380ee2d08d75d8ab 164 Gene3D G3DSA:1.10.287.180 12 83 5.4E-20 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PANTHER PTHR30081 316 619 3.4E-201 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PANTHER PTHR30081 227 285 3.4E-201 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PANTHER PTHR30081 1 173 3.4E-201 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.692 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PRINTS PR00702 Acriflavin resistance protein family signature 582 605 5.0E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 5.0E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PRINTS PR00702 Acriflavin resistance protein family signature 507 531 5.0E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 Gene3D G3DSA:1.20.1640.10 444 607 2.7E-26 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 605 6.0E-146 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 Pfam PF13721 SecD export protein N-terminal TM region 3 103 5.3E-32 T 23-04-2016 IPR027398 SecD export protein N-terminal TM domain CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 SUPERFAMILY SSF82866 415 608 3.14E-43 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 SUPERFAMILY SSF82866 155 174 3.14E-43 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 Pfam PF02355 Protein export membrane protein 438 598 2.9E-20 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 Pfam PF07549 SecD/SecF GG Motif 119 141 5.8E-6 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PANTHER PTHR30081:SF1 316 619 3.4E-201 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PANTHER PTHR30081:SF1 227 285 3.4E-201 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 PANTHER PTHR30081:SF1 1 173 3.4E-201 T 23-04-2016 CYCME_RS05695 8e6a35ea4f65115a4ed33b91a4833ff9 619 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 349 598 3.8E-78 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CYCME_RS08215 ac06795d12099c140155106a0af016e3 216 Pfam PF04367 Protein of unknown function (DUF502) 76 179 1.7E-27 T 23-04-2016 IPR007462 Protein of unknown function DUF502 CYCME_RS08215 ac06795d12099c140155106a0af016e3 216 PANTHER PTHR31876:SF1 28 210 4.3E-32 T 23-04-2016 CYCME_RS08215 ac06795d12099c140155106a0af016e3 216 PANTHER PTHR31876 28 210 4.3E-32 T 23-04-2016 CYCME_RS09405 1204bce5f7712831cebb0de99d7a07a3 151 Pfam PF06146 Phosphate-starvation-inducible E 70 136 4.4E-18 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 Gene3D G3DSA:3.40.50.980 242 403 1.7E-28 T 23-04-2016 CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 Pfam PF13193 AMP-binding enzyme C-terminal domain 511 589 7.4E-24 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 SUPERFAMILY SSF56801 3 621 1.57E-156 T 23-04-2016 CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 58 6.1E-23 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 Gene3D G3DSA:2.30.38.10 417 495 3.0E-11 T 23-04-2016 CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 Pfam PF00501 AMP-binding enzyme 70 501 6.1E-82 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 PANTHER PTHR24095 4 626 0.0 T 23-04-2016 CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 PANTHER PTHR24095:SF172 4 626 0.0 T 23-04-2016 CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 Gene3D G3DSA:3.30.300.30 496 603 2.0E-22 T 23-04-2016 CYCME_RS11700 316b93aa923ec58373eed47dfc069379 632 Gene3D G3DSA:3.40.50.980 54 241 2.8E-36 T 23-04-2016 CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 Pfam PF07687 Peptidase dimerisation domain 164 262 1.6E-14 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 64 73 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 Pfam PF01546 Peptidase family M20/M25/M40 65 356 3.5E-16 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 SUPERFAMILY SSF53187 5 176 4.37E-41 T 23-04-2016 CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 SUPERFAMILY SSF53187 284 359 4.37E-41 T 23-04-2016 CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 PIRSF PIRSF037238 3 360 1.4E-91 T 23-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 Gene3D G3DSA:3.30.70.360 177 269 8.7E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 PANTHER PTHR11014 6 364 1.6E-53 T 23-04-2016 CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 Gene3D G3DSA:3.40.630.10 5 176 7.7E-42 T 23-04-2016 CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 Gene3D G3DSA:3.40.630.10 301 360 7.7E-42 T 23-04-2016 CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 SUPERFAMILY SSF55031 167 270 2.09E-18 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS09530 5490e71b644e8b1416c20364d3e32994 366 PANTHER PTHR11014:SF64 6 364 1.6E-53 T 23-04-2016 CYCME_RS04455 236a474619b0fef81eb12c14f105abe9 312 Gene3D G3DSA:1.10.287.890 204 285 4.1E-29 T 23-04-2016 CYCME_RS04455 236a474619b0fef81eb12c14f105abe9 312 Gene3D G3DSA:3.40.50.300 5 174 2.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04455 236a474619b0fef81eb12c14f105abe9 312 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 304 30.528 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CYCME_RS04455 236a474619b0fef81eb12c14f105abe9 312 PANTHER PTHR11088 5 283 4.8E-111 T 23-04-2016 CYCME_RS04455 236a474619b0fef81eb12c14f105abe9 312 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 294 2.6E-99 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CYCME_RS04455 236a474619b0fef81eb12c14f105abe9 312 SUPERFAMILY SSF52540 8 160 1.09E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04455 236a474619b0fef81eb12c14f105abe9 312 Pfam PF01715 IPP transferase 41 287 6.3E-84 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CYCME_RS03510 fa37da7e2136e9db461dfec35342524f 140 Gene3D G3DSA:3.40.140.10 5 128 1.1E-23 T 23-04-2016 CYCME_RS03510 fa37da7e2136e9db461dfec35342524f 140 PANTHER PTHR34858:SF1 5 110 6.7E-25 T 23-04-2016 CYCME_RS03510 fa37da7e2136e9db461dfec35342524f 140 Pfam PF14464 Prokaryotic homologs of the JAB domain 11 113 4.6E-16 T 23-04-2016 IPR028090 JAB domain, prokaryotic CYCME_RS03510 fa37da7e2136e9db461dfec35342524f 140 SUPERFAMILY SSF102712 6 131 1.1E-23 T 23-04-2016 CYCME_RS03510 fa37da7e2136e9db461dfec35342524f 140 PANTHER PTHR34858 5 110 6.7E-25 T 23-04-2016 CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 SUPERFAMILY SSF56784 10 228 4.8E-63 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 197 7.6E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 197 1.2E-38 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 191 1.3E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 Gene3D G3DSA:3.40.50.1000 94 226 2.4E-45 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 Gene3D G3DSA:3.40.50.1000 9 26 2.4E-45 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 Gene3D G3DSA:1.10.150.240 27 93 1.9E-23 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 10 227 33.94 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 PANTHER PTHR18901:SF14 9 227 8.0E-62 T 23-04-2016 CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 PANTHER PTHR18901 9 227 8.0E-62 T 23-04-2016 CYCME_RS02080 c2be76ae5fe988bf67da268bc6311806 230 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 13 226 5.1E-65 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 CYCME_RS06380 9af2d22ebc9be35443f7ad8f581ebcce 425 Gene3D G3DSA:1.20.1600.10 27 419 2.0E-57 T 23-04-2016 CYCME_RS06380 9af2d22ebc9be35443f7ad8f581ebcce 425 PANTHER PTHR30203:SF1 1 424 8.0E-43 T 23-04-2016 CYCME_RS06380 9af2d22ebc9be35443f7ad8f581ebcce 425 Pfam PF02321 Outer membrane efflux protein 232 419 1.1E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS06380 9af2d22ebc9be35443f7ad8f581ebcce 425 Pfam PF02321 Outer membrane efflux protein 28 207 1.6E-16 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS06380 9af2d22ebc9be35443f7ad8f581ebcce 425 SUPERFAMILY SSF56954 24 420 3.92E-67 T 23-04-2016 CYCME_RS06380 9af2d22ebc9be35443f7ad8f581ebcce 425 PANTHER PTHR30203 1 424 8.0E-43 T 23-04-2016 CYCME_RS10005 c27d91e695a0d190633838fa98206c7c 287 PIRSF PIRSF004976 1 274 9.0E-71 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CYCME_RS10005 c27d91e695a0d190633838fa98206c7c 287 Pfam PF01171 PP-loop family 38 197 9.7E-15 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CYCME_RS10005 c27d91e695a0d190633838fa98206c7c 287 SUPERFAMILY SSF52402 24 254 5.51E-54 T 23-04-2016 CYCME_RS10005 c27d91e695a0d190633838fa98206c7c 287 PANTHER PTHR11807:SF16 1 263 4.1E-111 T 23-04-2016 CYCME_RS10005 c27d91e695a0d190633838fa98206c7c 287 PANTHER PTHR11807 1 263 4.1E-111 T 23-04-2016 CYCME_RS10005 c27d91e695a0d190633838fa98206c7c 287 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 1 267 56.344 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CYCME_RS10005 c27d91e695a0d190633838fa98206c7c 287 Gene3D G3DSA:3.40.50.620 20 202 1.1E-21 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 SUPERFAMILY SSF53822 271 443 2.33E-67 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 SUPERFAMILY SSF53822 471 615 2.33E-67 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 PANTHER PTHR38038:SF1 1 619 3.1E-88 T 23-04-2016 CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 Gene3D G3DSA:3.40.50.2300 269 374 3.9E-43 T 23-04-2016 CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 Gene3D G3DSA:3.40.50.2300 539 605 3.9E-43 T 23-04-2016 CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 PANTHER PTHR38038 1 619 3.1E-88 T 23-04-2016 CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 Pfam PF04348 LppC putative lipoprotein 61 612 1.6E-95 T 23-04-2016 IPR007443 Penicillin-binding protein activator LpoA CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 Gene3D G3DSA:1.25.40.10 46 170 6.7E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS09850 0b7b9e294f8dba2fa9e563e9c8b49d67 647 Gene3D G3DSA:3.40.50.2300 375 538 3.9E-42 T 23-04-2016 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 742 33.01 T 23-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 SMART SM00434 12 462 8.3E-219 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 595 635 5.2E-5 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 692 8.2E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 Gene3D G3DSA:2.120.10.90 497 738 3.8E-36 T 23-04-2016 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 Gene3D G3DSA:3.30.1360.40 239 332 5.2E-23 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 468 2.7E-133 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 Gene3D G3DSA:3.90.199.10 334 399 5.2E-105 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 Gene3D G3DSA:3.90.199.10 32 238 5.2E-105 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 PANTHER PTHR10169 5 523 0.0 T 23-04-2016 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 SUPERFAMILY SSF101904 498 740 2.22E-55 T 23-04-2016 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 SUPERFAMILY SSF56719 32 484 9.68E-153 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 PANTHER PTHR10169:SF30 5 523 0.0 T 23-04-2016 CYCME_RS05085 ef3ae61498e5b733e601260c89c87b99 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 737 0.0 T 23-04-2016 CYCME_RS07555 8b672b8a359d17f1447664c3c7b8e629 251 PANTHER PTHR21666 143 240 5.4E-23 T 23-04-2016 CYCME_RS07555 8b672b8a359d17f1447664c3c7b8e629 251 PANTHER PTHR21666:SF213 143 240 5.4E-23 T 23-04-2016 CYCME_RS07555 8b672b8a359d17f1447664c3c7b8e629 251 Pfam PF01476 LysM domain 50 91 6.6E-9 T 23-04-2016 IPR018392 LysM domain CYCME_RS07555 8b672b8a359d17f1447664c3c7b8e629 251 Gene3D G3DSA:3.10.350.10 48 92 1.5E-15 T 23-04-2016 IPR018392 LysM domain CYCME_RS07555 8b672b8a359d17f1447664c3c7b8e629 251 Gene3D G3DSA:2.70.70.10 112 246 5.9E-23 T 23-04-2016 CYCME_RS07555 8b672b8a359d17f1447664c3c7b8e629 251 Pfam PF01551 Peptidase family M23 150 240 8.3E-21 T 23-04-2016 IPR016047 Peptidase M23 CYCME_RS07555 8b672b8a359d17f1447664c3c7b8e629 251 SMART SM00257 49 93 7.5E-10 T 23-04-2016 IPR018392 LysM domain CYCME_RS07555 8b672b8a359d17f1447664c3c7b8e629 251 SUPERFAMILY SSF51261 49 240 7.32E-33 T 23-04-2016 IPR011055 Duplicated hybrid motif CYCME_RS00795 a931b62f62d6194f2199015a3bfcfbd4 227 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 5.3E-82 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CYCME_RS00795 a931b62f62d6194f2199015a3bfcfbd4 227 PANTHER PTHR30586:SF0 1 220 3.9E-114 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CYCME_RS00795 a931b62f62d6194f2199015a3bfcfbd4 227 PIRSF PIRSF006102 1 219 3.2E-76 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CYCME_RS00795 a931b62f62d6194f2199015a3bfcfbd4 227 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.461 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CYCME_RS00795 a931b62f62d6194f2199015a3bfcfbd4 227 PANTHER PTHR30586 1 220 3.9E-114 T 23-04-2016 CYCME_RS00795 a931b62f62d6194f2199015a3bfcfbd4 227 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 9.5E-63 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CYCME_RS11565 0aa491cc9e74d6dd50674f848e841828 362 Pfam PF02445 Quinolinate synthetase A protein 18 359 2.0E-103 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CYCME_RS11565 0aa491cc9e74d6dd50674f848e841828 362 PANTHER PTHR30573 6 361 5.3E-136 T 23-04-2016 CYCME_RS11565 0aa491cc9e74d6dd50674f848e841828 362 PANTHER PTHR30573:SF0 6 361 5.3E-136 T 23-04-2016 CYCME_RS11565 0aa491cc9e74d6dd50674f848e841828 362 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 12 361 1.6E-91 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CYCME_RS11565 0aa491cc9e74d6dd50674f848e841828 362 SUPERFAMILY SSF142754 22 361 7.98E-95 T 23-04-2016 CYCME_RS11565 0aa491cc9e74d6dd50674f848e841828 362 Hamap MF_00569 Quinolinate synthase A [nadA]. 12 361 47.855 T 23-04-2016 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 Gene3D G3DSA:3.40.630.30 372 514 1.3E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 86 515 4.4E-161 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 PANTHER PTHR30602 7 517 3.9E-165 T 23-04-2016 CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 SUPERFAMILY SSF53633 83 365 3.27E-62 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 83 516 167.395 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 Gene3D G3DSA:3.40.1160.10 101 364 3.5E-63 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 SUPERFAMILY SSF55729 373 491 2.61E-13 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 Pfam PF00696 Amino acid kinase family 103 342 1.7E-24 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS11630 a207363d9d2bf5ceb2e475edb714de92 517 PIRSF PIRSF000423 78 516 3.3E-172 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 CYCME_RS09940 90eadc8cc6c95ac449713f9970f46513 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.1E-40 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CYCME_RS09940 90eadc8cc6c95ac449713f9970f46513 103 PANTHER PTHR21349 1 101 2.3E-41 T 23-04-2016 CYCME_RS09940 90eadc8cc6c95ac449713f9970f46513 103 SUPERFAMILY SSF141091 1 102 1.12E-38 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CYCME_RS09940 90eadc8cc6c95ac449713f9970f46513 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.0E-40 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09940 90eadc8cc6c95ac449713f9970f46513 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.898 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09940 90eadc8cc6c95ac449713f9970f46513 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 Gene3D G3DSA:3.30.565.10 200 353 2.2E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 SUPERFAMILY SSF55785 10 106 7.8E-7 T 23-04-2016 IPR000014 PAS domain CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 103 1.3E-5 T 23-04-2016 IPR000014 PAS domain CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 SUPERFAMILY SSF55874 202 352 1.96E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 SMART SM00388 136 200 2.7E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 PANTHER PTHR24423:SF488 7 270 2.9E-93 T 23-04-2016 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 PANTHER PTHR24423:SF488 286 354 2.9E-93 T 23-04-2016 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 193 4.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 Gene3D G3DSA:3.30.450.20 9 114 9.1E-13 T 23-04-2016 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 353 6.0E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 SMART SM00387 239 354 1.5E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 1.6E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 1.6E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 PANTHER PTHR24423 7 270 2.9E-93 T 23-04-2016 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 PANTHER PTHR24423 286 354 2.9E-93 T 23-04-2016 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 SUPERFAMILY SSF47384 128 199 4.51E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS00140 10660313cd236a2d52202d97c285cedb 356 Gene3D G3DSA:1.10.287.130 129 192 4.8E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 PANTHER PTHR11699 4 483 2.3E-295 T 23-04-2016 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 Pfam PF00171 Aldehyde dehydrogenase family 19 477 5.2E-172 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 2.7E-217 T 23-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 SUPERFAMILY SSF53720 8 482 3.4E-171 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 Gene3D G3DSA:3.40.309.10 270 458 1.1E-68 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 Gene3D G3DSA:3.40.605.10 10 269 1.0E-102 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS09370 402d6ad64db4f4238e386dad58139a1b 483 PANTHER PTHR11699:SF49 4 483 2.3E-295 T 23-04-2016 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 SMART SM00388 220 288 2.8E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 SMART SM00448 4 119 1.5E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 221 288 6.0E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 SUPERFAMILY SSF47384 207 288 2.35E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 SUPERFAMILY SSF55874 277 444 1.44E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 Gene3D G3DSA:1.10.287.130 212 274 5.4E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 SMART SM00387 333 446 2.2E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 Pfam PF00072 Response regulator receiver domain 6 119 4.1E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 PANTHER PTHR24423 6 13 3.2E-74 T 23-04-2016 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 PANTHER PTHR24423 199 444 3.2E-74 T 23-04-2016 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 Gene3D G3DSA:3.40.50.2300 2 125 3.4E-34 T 23-04-2016 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 SUPERFAMILY SSF52172 1 145 1.15E-34 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 6.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 6.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 6.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 6.2E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 Gene3D G3DSA:3.30.565.10 275 446 2.5E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS10420 17d9198fbd7b3bc34e4f8ee9a6498cd7 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 443 2.1E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04035 02fee2011873276eadbbbabc86603dd4 260 PANTHER PTHR30188 1 258 6.2E-108 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CYCME_RS04035 02fee2011873276eadbbbabc86603dd4 260 PANTHER PTHR30188:SF4 1 258 6.2E-108 T 23-04-2016 CYCME_RS04035 02fee2011873276eadbbbabc86603dd4 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 17 257 3.2E-86 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CYCME_RS04035 02fee2011873276eadbbbabc86603dd4 260 Pfam PF02405 Permease MlaE 44 255 2.0E-75 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 SUPERFAMILY SSF55073 146 304 7.85E-50 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 SMART SM00448 1 117 6.3E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 300 7.3E-42 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 SMART SM00267 130 302 7.2E-62 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 SMART SM00052 312 557 3.4E-81 T 23-04-2016 IPR001633 EAL domain CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 Pfam PF00072 Response regulator receiver domain 3 106 2.2E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 PANTHER PTHR10799 174 391 4.0E-74 T 23-04-2016 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 PANTHER PTHR10799 441 460 4.0E-74 T 23-04-2016 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 PANTHER PTHR10799 1 126 4.0E-74 T 23-04-2016 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 Gene3D G3DSA:3.40.50.2300 1 120 1.9E-29 T 23-04-2016 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 SUPERFAMILY SSF52172 1 138 1.28E-29 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 PANTHER PTHR10799:SF774 174 391 4.0E-74 T 23-04-2016 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 PANTHER PTHR10799:SF774 441 460 4.0E-74 T 23-04-2016 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 PANTHER PTHR10799:SF774 1 126 4.0E-74 T 23-04-2016 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 298 7.3E-49 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 Gene3D G3DSA:3.30.70.270 143 308 1.1E-56 T 23-04-2016 CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 SUPERFAMILY SSF141868 317 565 2.88E-77 T 23-04-2016 IPR001633 EAL domain CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 Pfam PF00563 EAL domain 318 551 1.6E-65 T 23-04-2016 IPR001633 EAL domain CYCME_RS06765 2c3779c988f4e07dc40ccdc5dc384467 571 Gene3D G3DSA:3.20.20.450 315 561 1.9E-81 T 23-04-2016 IPR001633 EAL domain CYCME_RS04375 626023ce4a31da5a4e1b2cb8c620cb8f 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 739 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CYCME_RS04375 626023ce4a31da5a4e1b2cb8c620cb8f 743 PANTHER PTHR36999 2 743 0.0 T 23-04-2016 CYCME_RS04375 626023ce4a31da5a4e1b2cb8c620cb8f 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 743 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CYCME_RS04375 626023ce4a31da5a4e1b2cb8c620cb8f 743 SUPERFAMILY SSF53659 5 742 0.0 T 23-04-2016 CYCME_RS04375 626023ce4a31da5a4e1b2cb8c620cb8f 743 PIRSF PIRSF009407 1 743 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CYCME_RS04375 626023ce4a31da5a4e1b2cb8c620cb8f 743 Gene3D G3DSA:3.40.718.10 174 286 6.3E-31 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CYCME_RS04375 626023ce4a31da5a4e1b2cb8c620cb8f 743 Gene3D G3DSA:3.40.718.10 341 364 6.3E-31 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CYCME_RS04375 626023ce4a31da5a4e1b2cb8c620cb8f 743 Gene3D G3DSA:3.40.718.10 540 647 6.3E-31 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 Gene3D G3DSA:2.102.10.10 40 145 4.0E-22 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 SUPERFAMILY SSF50022 10 155 1.15E-43 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 SUPERFAMILY SSF55961 155 432 2.75E-61 T 23-04-2016 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 159 424 2.5E-27 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 Pfam PF00355 Rieske [2Fe-2S] domain 40 121 6.9E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 83 106 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 PANTHER PTHR21266 17 216 3.9E-64 T 23-04-2016 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 PANTHER PTHR21266:SF30 17 216 3.9E-64 T 23-04-2016 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 Gene3D G3DSA:3.90.380.10 146 432 2.6E-90 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 139 165 4.7E-54 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 25 50 4.7E-54 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 76 96 4.7E-54 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 55 70 4.7E-54 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 97 117 4.7E-54 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08880 0c3026b7574fb48d90a0cc55f3e581ed 435 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 180 202 4.7E-54 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 PIRSF PIRSF000437 13 797 1.2E-210 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 SUPERFAMILY SSF69593 266 475 1.03E-23 T 23-04-2016 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 Pfam PF01553 Acyltransferase 283 414 1.1E-19 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 PANTHER PTHR12563:SF14 1 117 1.8E-223 T 23-04-2016 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 PANTHER PTHR12563:SF14 136 790 1.8E-223 T 23-04-2016 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 Gene3D G3DSA:3.40.1130.10 278 425 2.5E-6 T 23-04-2016 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 7 797 22.725 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 SMART SM00563 291 418 3.4E-20 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 PIRSF PIRSF500064 1 799 5.2E-219 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 5 792 1.1E-245 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 PANTHER PTHR12563 1 117 1.8E-223 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 CYCME_RS10000 a7cd12f39f72df87f22bc411e739a479 799 PANTHER PTHR12563 136 790 1.8E-223 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 CYCME_RS06170 9b73da0f7b5deb8942e2c1c31c58ca7b 527 PIRSF PIRSF001363 1 527 4.5E-246 T 23-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CYCME_RS06170 9b73da0f7b5deb8942e2c1c31c58ca7b 527 SUPERFAMILY SSF51645 8 527 3.14E-188 T 23-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CYCME_RS06170 9b73da0f7b5deb8942e2c1c31c58ca7b 527 Pfam PF01274 Malate synthase 6 526 8.9E-203 T 23-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CYCME_RS06170 9b73da0f7b5deb8942e2c1c31c58ca7b 527 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 18 527 2.1E-251 T 23-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CYCME_RS06170 9b73da0f7b5deb8942e2c1c31c58ca7b 527 PANTHER PTHR21631:SF1 8 527 4.3E-272 T 23-04-2016 CYCME_RS06170 9b73da0f7b5deb8942e2c1c31c58ca7b 527 PANTHER PTHR21631 8 527 4.3E-272 T 23-04-2016 CYCME_RS06170 9b73da0f7b5deb8942e2c1c31c58ca7b 527 Gene3D G3DSA:3.20.20.360 65 409 1.3E-119 T 23-04-2016 CYCME_RS06170 9b73da0f7b5deb8942e2c1c31c58ca7b 527 Gene3D G3DSA:1.20.1220.12 410 521 5.2E-36 T 23-04-2016 CYCME_RS01295 5fd5aae3087bbdb1143cec848fc82afa 185 PANTHER PTHR41729 1 185 4.2E-50 T 23-04-2016 CYCME_RS01295 5fd5aae3087bbdb1143cec848fc82afa 185 Pfam PF13875 Domain of unknown function (DUF4202) 6 180 9.9E-67 T 23-04-2016 IPR025255 Protein of unknown function DUF4202 CYCME_RS01295 5fd5aae3087bbdb1143cec848fc82afa 185 PANTHER PTHR41729:SF1 1 185 4.2E-50 T 23-04-2016 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 PANTHER PTHR21266 24 221 1.0E-32 T 23-04-2016 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 SUPERFAMILY SSF50022 13 165 1.7E-38 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 PANTHER PTHR21266:SF30 24 221 1.0E-32 T 23-04-2016 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 199 415 1.4E-11 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 Pfam PF00355 Rieske [2Fe-2S] domain 43 129 1.2E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 SUPERFAMILY SSF55961 180 415 1.02E-38 T 23-04-2016 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 Gene3D G3DSA:3.90.380.10 156 416 9.2E-44 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 Gene3D G3DSA:2.102.10.10 44 155 1.9E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 2.2E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 188 210 2.2E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 2.2E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 2.2E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS04890 834518e54583fdcfb5b91beaf9004e66 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 150 176 2.2E-29 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS04485 97b777f25efe6f24a6e828a3e12e0737 390 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 16 326 5.9E-88 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 CYCME_RS04485 97b777f25efe6f24a6e828a3e12e0737 390 PANTHER PTHR11476:SF5 10 362 1.2E-64 T 23-04-2016 CYCME_RS04485 97b777f25efe6f24a6e828a3e12e0737 390 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 373 28.944 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 CYCME_RS04485 97b777f25efe6f24a6e828a3e12e0737 390 SUPERFAMILY SSF55681 7 322 1.26E-53 T 23-04-2016 CYCME_RS04485 97b777f25efe6f24a6e828a3e12e0737 390 PIRSF PIRSF001549 3 372 3.0E-52 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CYCME_RS04485 97b777f25efe6f24a6e828a3e12e0737 390 Pfam PF13393 Histidyl-tRNA synthetase 12 323 1.9E-107 T 23-04-2016 CYCME_RS04485 97b777f25efe6f24a6e828a3e12e0737 390 PANTHER PTHR11476 10 362 1.2E-64 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CYCME_RS04485 97b777f25efe6f24a6e828a3e12e0737 390 Gene3D G3DSA:3.30.930.10 20 322 2.0E-70 T 23-04-2016 CYCME_RS03750 e78aae29d9783da424911bd127747548 143 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 5.7E-30 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P CYCME_RS03750 e78aae29d9783da424911bd127747548 143 PANTHER PTHR12934 1 141 1.9E-58 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03750 e78aae29d9783da424911bd127747548 143 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 23-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03750 e78aae29d9783da424911bd127747548 143 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 142 2.5E-48 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03750 e78aae29d9783da424911bd127747548 143 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 18.262 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CYCME_RS03750 e78aae29d9783da424911bd127747548 143 SUPERFAMILY SSF52080 4 141 8.37E-45 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P CYCME_RS03750 e78aae29d9783da424911bd127747548 143 Gene3D G3DSA:3.100.10.10 32 142 1.1E-23 T 23-04-2016 CYCME_RS10930 14ad28400ed63e9844156e83dc218647 151 Pfam PF06271 RDD family 8 132 8.9E-22 T 23-04-2016 IPR010432 RDD CYCME_RS10930 14ad28400ed63e9844156e83dc218647 151 PANTHER PTHR36115 7 142 7.6E-34 T 23-04-2016 CYCME_RS10930 14ad28400ed63e9844156e83dc218647 151 PANTHER PTHR36115:SF2 7 142 7.6E-34 T 23-04-2016 CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 SMART SM00487 19 285 2.4E-6 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 Pfam PF13307 Helicase C-terminal domain 462 618 2.3E-37 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 Gene3D G3DSA:3.40.50.300 393 402 5.2E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 Gene3D G3DSA:3.40.50.300 16 119 5.2E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 Gene3D G3DSA:3.40.50.300 191 256 5.2E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 SUPERFAMILY SSF52540 452 545 1.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 SUPERFAMILY SSF52540 219 280 1.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 SUPERFAMILY SSF52540 576 602 1.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 PANTHER PTHR11472:SF37 1 624 1.0E-172 T 23-04-2016 CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 PANTHER PTHR11472 1 624 1.0E-172 T 23-04-2016 CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 SUPERFAMILY SSF52540 565 602 1.09E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 SUPERFAMILY SSF52540 12 111 1.09E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 SUPERFAMILY SSF52540 188 245 1.09E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 Pfam PF00270 DEAD/DEAH box helicase 31 92 1.5E-6 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 Gene3D G3DSA:3.40.50.300 458 603 3.5E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09015 3a4b3b2586b90751af228935a002586a 651 SMART SM00491 477 606 1.6E-36 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 Gene3D G3DSA:1.10.150.20 555 608 4.3E-20 T 23-04-2016 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 SUPERFAMILY SSF47781 523 609 1.14E-19 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 Pfam PF01541 GIY-YIG catalytic domain 23 98 1.3E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 SUPERFAMILY SSF82771 22 105 2.22E-22 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 Pfam PF02151 UvrB/uvrC motif 210 243 4.0E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 14 587 2.6E-190 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 Gene3D G3DSA:3.40.1440.10 22 100 9.8E-12 T 23-04-2016 IPR027299 GIY-YIG domain CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 Pfam PF14520 Helix-hairpin-helix domain 556 604 1.3E-8 T 23-04-2016 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 SMART SM00465 22 103 7.1E-22 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 PANTHER PTHR30562:SF1 13 607 1.8E-251 T 23-04-2016 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 Gene3D G3DSA:4.10.860.10 188 248 7.4E-21 T 23-04-2016 IPR001943 UVR domain GO:0005515 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 Hamap MF_00203 UvrABC system protein C [uvrC]. 9 606 28.107 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 SUPERFAMILY SSF46600 196 248 2.35E-14 T 23-04-2016 IPR001943 UVR domain GO:0005515 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 PANTHER PTHR30562 13 607 1.8E-251 T 23-04-2016 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 SMART SM00278 555 574 110.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 SMART SM00278 587 606 2.4 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS04355 9a3dabd91fce1a833a55accbe5b6e2ff 613 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 541 9.3E-46 T 23-04-2016 IPR001162 UvrC family homology region CYCME_RS03245 93b12f9d35311af1bfcf89599f162293 130 Gene3D G3DSA:3.10.450.50 4 125 3.1E-36 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS03245 93b12f9d35311af1bfcf89599f162293 130 Pfam PF07858 Limonene-1,2-epoxide hydrolase catalytic domain 5 124 8.8E-29 T 23-04-2016 IPR013100 Limonene-1,2-epoxide hydrolase CYCME_RS03245 93b12f9d35311af1bfcf89599f162293 130 SUPERFAMILY SSF54427 4 128 2.15E-31 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 SMART SM00052 4 246 3.2E-22 T 23-04-2016 IPR001633 EAL domain CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 PANTHER PTHR33121:SF10 12 241 7.7E-42 T 23-04-2016 CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 Pfam PF00563 EAL domain 12 241 3.2E-47 T 23-04-2016 IPR001633 EAL domain CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 PANTHER PTHR33121 12 241 7.7E-42 T 23-04-2016 CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 SMART SM00267 399 584 2.1E-7 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 Gene3D G3DSA:3.30.70.270 411 580 2.5E-20 T 23-04-2016 CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 422 498 4.3E-16 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 Gene3D G3DSA:3.20.20.450 11 243 3.2E-50 T 23-04-2016 IPR001633 EAL domain CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 SUPERFAMILY SSF141868 10 242 4.84E-60 T 23-04-2016 IPR001633 EAL domain CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 424 500 3.3E-16 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS11500 bb74c156f475610265bd355296da0b3e 595 SUPERFAMILY SSF55073 413 582 6.59E-21 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS01350 8d3daaa298a49d6e04e2d88a6aa94b3e 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 135 1.7E-30 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CYCME_RS01350 8d3daaa298a49d6e04e2d88a6aa94b3e 141 Gene3D G3DSA:3.30.420.140 3 139 5.0E-40 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CYCME_RS01350 8d3daaa298a49d6e04e2d88a6aa94b3e 141 SMART SM00732 2 102 2.9E-17 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CYCME_RS01350 8d3daaa298a49d6e04e2d88a6aa94b3e 141 Pfam PF03652 Holliday junction resolvase 3 135 4.3E-37 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CYCME_RS01350 8d3daaa298a49d6e04e2d88a6aa94b3e 141 PANTHER PTHR33317 5 135 1.2E-29 T 23-04-2016 CYCME_RS01350 8d3daaa298a49d6e04e2d88a6aa94b3e 141 SUPERFAMILY SSF53098 3 136 5.46E-33 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS01350 8d3daaa298a49d6e04e2d88a6aa94b3e 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 138 20.753 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 SUPERFAMILY SSF55031 179 288 1.18E-26 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 Gene3D G3DSA:3.30.70.360 188 289 1.4E-31 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 1.5E-42 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 3.7E-165 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 51.536 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 PANTHER PTHR11014 3 374 7.6E-90 T 23-04-2016 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 Pfam PF07687 Peptidase dimerisation domain 175 282 3.2E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 SUPERFAMILY SSF53187 2 178 1.16E-61 T 23-04-2016 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 SUPERFAMILY SSF53187 292 373 1.16E-61 T 23-04-2016 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 Gene3D G3DSA:3.40.630.10 2 187 1.2E-68 T 23-04-2016 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 Gene3D G3DSA:3.40.630.10 316 373 1.2E-68 T 23-04-2016 CYCME_RS05305 b1a15ca8fbd44f39f540eb2482c9f54c 375 PANTHER PTHR11014:SF106 3 374 7.6E-90 T 23-04-2016 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 Pfam PF00119 ATP synthase A chain 54 267 2.1E-56 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 44 268 4.1E-45 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 Gene3D G3DSA:1.20.120.220 103 272 4.8E-54 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 PANTHER PTHR11410:SF7 1 274 3.0E-93 T 23-04-2016 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 PANTHER PTHR11410 1 274 3.0E-93 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 SUPERFAMILY SSF81336 101 267 2.35E-43 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 273 15.469 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site CYCME_RS12315 61610334a369ab85befee989128bddf7 274 PRINTS PR00123 ATP synthase A subunit signature 109 125 5.8E-17 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 5.8E-17 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 PRINTS PR00123 ATP synthase A subunit signature 253 268 5.8E-17 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS12315 61610334a369ab85befee989128bddf7 274 PRINTS PR00123 ATP synthase A subunit signature 186 201 5.8E-17 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CYCME_RS06745 b2c10c7bbf27a3348a6d806d68bac5dd 260 Pfam PF00005 ABC transporter 18 165 6.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS06745 b2c10c7bbf27a3348a6d806d68bac5dd 260 PANTHER PTHR24220:SF73 4 238 1.1E-80 T 23-04-2016 CYCME_RS06745 b2c10c7bbf27a3348a6d806d68bac5dd 260 Gene3D G3DSA:3.40.50.300 3 235 7.0E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06745 b2c10c7bbf27a3348a6d806d68bac5dd 260 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS06745 b2c10c7bbf27a3348a6d806d68bac5dd 260 PANTHER PTHR24220 4 238 1.1E-80 T 23-04-2016 CYCME_RS06745 b2c10c7bbf27a3348a6d806d68bac5dd 260 SMART SM00382 27 213 8.8E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS06745 b2c10c7bbf27a3348a6d806d68bac5dd 260 SUPERFAMILY SSF52540 7 213 2.47E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11100 63f510b57cc9103a375977d610b1d647 263 Pfam PF08478 POTRA domain, FtsQ-type 42 111 1.9E-14 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type CYCME_RS11100 63f510b57cc9103a375977d610b1d647 263 Pfam PF03799 Cell division protein FtsQ 115 228 6.5E-18 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB CYCME_RS11100 63f510b57cc9103a375977d610b1d647 263 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 15 236 18.239 T 23-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 CYCME_RS11100 63f510b57cc9103a375977d610b1d647 263 PANTHER PTHR35851:SF1 20 253 1.9E-48 T 23-04-2016 CYCME_RS11100 63f510b57cc9103a375977d610b1d647 263 PANTHER PTHR35851 20 253 1.9E-48 T 23-04-2016 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 PANTHER PTHR30244 324 411 2.8E-65 T 23-04-2016 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 PANTHER PTHR30244 3 271 2.8E-65 T 23-04-2016 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 SUPERFAMILY SSF64518 1 411 1.31E-72 T 23-04-2016 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 Pfam PF00700 Bacterial flagellin C-terminal helical region 329 411 5.9E-8 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 411 3.9E-88 T 23-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 PRINTS PR00207 Flagellin signature 76 95 3.3E-6 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 PRINTS PR00207 Flagellin signature 37 54 3.3E-6 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 PRINTS PR00207 Flagellin signature 111 134 3.3E-6 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 Gene3D G3DSA:1.20.1330.10 312 369 1.9E-28 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 Gene3D G3DSA:1.20.1330.10 55 181 1.9E-28 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 7.9E-24 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 PANTHER PTHR30244:SF5 324 411 2.8E-65 T 23-04-2016 CYCME_RS05215 b43435accf1bb49aad6fa3cff87b3ba4 411 PANTHER PTHR30244:SF5 3 271 2.8E-65 T 23-04-2016 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 PANTHER PTHR33406 1 97 9.4E-49 T 23-04-2016 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 PANTHER PTHR33406 114 762 9.4E-49 T 23-04-2016 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 Pfam PF03176 MMPL family 548 757 2.4E-11 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 Pfam PF03176 MMPL family 137 376 7.5E-21 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 SUPERFAMILY SSF82866 159 377 6.67E-31 T 23-04-2016 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 Gene3D G3DSA:1.20.1640.10 177 383 1.4E-32 T 23-04-2016 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 Gene3D G3DSA:1.20.1640.10 565 764 4.9E-25 T 23-04-2016 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 SUPERFAMILY SSF82866 553 763 1.83E-27 T 23-04-2016 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 PANTHER PTHR33406:SF2 1 97 9.4E-49 T 23-04-2016 CYCME_RS01865 bce7bf74f4ec7cab07bd1e19c98eec9b 776 PANTHER PTHR33406:SF2 114 762 9.4E-49 T 23-04-2016 CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 PANTHER PTHR31273:SF0 1 799 0.0 T 23-04-2016 CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 Hamap MF_01403 Probable phosphoketolase. 13 798 41.454 T 23-04-2016 IPR023962 Probable phosphoketolase CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 Gene3D G3DSA:3.40.50.970 11 271 5.8E-18 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 SUPERFAMILY SSF52518 9 376 5.33E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 ProSitePatterns PS60003 Phosphoketolase signature 2. 165 183 - T 23-04-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 Pfam PF09364 XFP N-terminal domain 16 392 4.7E-191 T 23-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 ProSitePatterns PS60002 Phosphoketolase signature 1. 152 158 - T 23-04-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 SUPERFAMILY SSF52518 384 598 2.0E-25 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 PIRSF PIRSF017245 2 798 0.0 T 23-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 PANTHER PTHR31273 1 799 0.0 T 23-04-2016 CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 Pfam PF09363 XFP C-terminal domain 595 796 1.5E-90 T 23-04-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 CYCME_RS06340 7088c27a16b48f0decbcd61d6bf05778 799 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 407 584 6.3E-90 T 23-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 CYCME_RS07690 40bd5afd3da4ba474695008b6d76ad1e 185 PANTHER PTHR20982 1 185 1.2E-74 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CYCME_RS07690 40bd5afd3da4ba474695008b6d76ad1e 185 Gene3D G3DSA:1.10.132.20 66 184 2.8E-41 T 23-04-2016 IPR023584 Ribosome recycling factor domain CYCME_RS07690 40bd5afd3da4ba474695008b6d76ad1e 185 Pfam PF01765 Ribosome recycling factor 20 183 3.4E-61 T 23-04-2016 IPR023584 Ribosome recycling factor domain CYCME_RS07690 40bd5afd3da4ba474695008b6d76ad1e 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.983 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CYCME_RS07690 40bd5afd3da4ba474695008b6d76ad1e 185 SUPERFAMILY SSF55194 1 184 6.54E-68 T 23-04-2016 IPR023584 Ribosome recycling factor domain CYCME_RS07690 40bd5afd3da4ba474695008b6d76ad1e 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 184 6.3E-68 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CYCME_RS09205 7c8c615d3bccefcc9db34d3eaad8960e 151 Gene3D G3DSA:3.40.47.10 4 125 3.6E-33 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS09205 7c8c615d3bccefcc9db34d3eaad8960e 151 Pfam PF00108 Thiolase, N-terminal domain 4 127 8.0E-28 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CYCME_RS09205 7c8c615d3bccefcc9db34d3eaad8960e 151 PANTHER PTHR18919 1 151 5.1E-50 T 23-04-2016 CYCME_RS09205 7c8c615d3bccefcc9db34d3eaad8960e 151 PANTHER PTHR18919:SF69 1 151 5.1E-50 T 23-04-2016 CYCME_RS09205 7c8c615d3bccefcc9db34d3eaad8960e 151 SUPERFAMILY SSF53901 1 151 1.9E-35 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS09205 7c8c615d3bccefcc9db34d3eaad8960e 151 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 Pfam PF00717 Peptidase S24-like 67 149 8.3E-22 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 137 6.2E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 200 219 6.2E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 61 77 6.2E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 ProSitePatterns PS00760 Signal peptidases I lysine active site. 127 139 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 ProSitePatterns PS00501 Signal peptidases I serine active site. 70 77 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 ProSitePatterns PS00761 Signal peptidases I signature 3. 205 218 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 Pfam PF10502 Signal peptidase, peptidase S26 192 237 3.4E-8 T 23-04-2016 IPR019533 Peptidase S26 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 Gene3D G3DSA:2.10.109.10 57 135 5.1E-57 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 Gene3D G3DSA:2.10.109.10 200 249 5.1E-57 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 SUPERFAMILY SSF51306 59 255 8.37E-68 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 46 239 2.0E-50 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 PANTHER PTHR12383 7 244 7.4E-98 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CYCME_RS07390 58a2d669231be0e5456e9c8340deb9ed 257 PANTHER PTHR12383:SF27 7 244 7.4E-98 T 23-04-2016 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 SUPERFAMILY SSF52156 657 786 9.81E-35 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Gene3D G3DSA:3.40.50.10050 679 758 4.7E-24 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 PANTHER PTHR23115:SF184 364 707 1.2E-196 T 23-04-2016 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 PANTHER PTHR23115:SF184 733 875 1.2E-196 T 23-04-2016 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 877 16.962 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 SUPERFAMILY SSF52540 368 547 3.21E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 SUPERFAMILY SSF46955 3 51 1.1E-7 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 SUPERFAMILY SSF50447 781 878 1.85E-32 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Gene3D G3DSA:3.30.56.50 2 51 2.2E-15 T 23-04-2016 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 PANTHER PTHR23115 364 707 1.2E-196 T 23-04-2016 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 PANTHER PTHR23115 733 875 1.2E-196 T 23-04-2016 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Gene3D G3DSA:2.40.30.10 781 878 1.7E-37 T 23-04-2016 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 383 537 1.1E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Gene3D G3DSA:3.40.50.300 375 539 1.0E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Pfam PF11987 Translation-initiation factor 2 664 768 4.0E-36 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Gene3D G3DSA:2.40.30.10 552 644 4.7E-20 T 23-04-2016 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 ProSitePatterns PS01176 Initiation factor 2 signature. 830 852 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 298 878 9.5E-250 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 305 353 3.4E-13 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 1.5E-8 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 64 99 2.5E-8 T 23-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 SUPERFAMILY SSF50447 553 632 6.41E-21 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS04325 ce6e9ba2b62c2e66985b68d8967dd524 879 Pfam PF00009 Elongation factor Tu GTP binding domain 384 540 6.3E-36 T 23-04-2016 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 ProSitePatterns PS01312 SecA family signature. 495 510 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Gene3D G3DSA:3.90.1440.10 230 363 3.7E-45 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PRINTS PR00906 SecA protein signature 101 115 3.6E-68 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PRINTS PR00906 SecA protein signature 117 127 3.6E-68 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PRINTS PR00906 SecA protein signature 408 421 3.6E-68 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PRINTS PR00906 SecA protein signature 334 356 3.6E-68 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PRINTS PR00906 SecA protein signature 63 87 3.6E-68 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PRINTS PR00906 SecA protein signature 371 388 3.6E-68 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PRINTS PR00906 SecA protein signature 170 190 3.6E-68 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Pfam PF01043 SecA preprotein cross-linking domain 232 353 1.6E-37 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Gene3D G3DSA:3.40.50.300 413 600 1.8E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 SUPERFAMILY SSF81886 601 821 1.05E-80 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 SUPERFAMILY SSF81886 861 873 1.05E-80 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 813 19.999 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Pfam PF07516 SecA Wing and Scaffold domain 599 811 1.3E-67 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Gene3D G3DSA:3.40.50.300 2 228 4.4E-130 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Gene3D G3DSA:3.40.50.300 364 411 4.4E-130 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 SMART SM00958 228 353 3.0E-73 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 SMART SM00957 6 397 9.0E-301 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Gene3D G3DSA:1.10.3060.10 629 812 4.9E-56 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Pfam PF02810 SEC-C motif 865 883 2.1E-10 T 23-04-2016 IPR004027 SEC-C motif CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 SUPERFAMILY SSF81767 227 363 1.7E-43 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 Pfam PF07517 SecA DEAD-like domain 7 397 3.3E-136 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 SUPERFAMILY SSF52540 4 228 3.22E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 SUPERFAMILY SSF52540 363 410 3.22E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 SUPERFAMILY SSF52540 413 599 3.8E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PANTHER PTHR30612 5 515 0.0 T 23-04-2016 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 PANTHER PTHR30612 531 884 0.0 T 23-04-2016 CYCME_RS11070 813fdafcd9e07754dd489d9a013a48e7 884 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 797 0.0 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CYCME_RS03425 171361f5bdd4bfd1dcce0ec1d2a6d7f2 221 SUPERFAMILY SSF53448 1 218 4.96E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS03425 171361f5bdd4bfd1dcce0ec1d2a6d7f2 221 PANTHER PTHR22572 2 214 1.4E-42 T 23-04-2016 CYCME_RS03425 171361f5bdd4bfd1dcce0ec1d2a6d7f2 221 Gene3D G3DSA:3.90.550.10 1 220 2.4E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS03425 171361f5bdd4bfd1dcce0ec1d2a6d7f2 221 Pfam PF00483 Nucleotidyl transferase 3 220 3.3E-15 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CYCME_RS00030 38d7d94e28f7c65f8312115f24df2536 428 Pfam PF13433 Periplasmic binding protein domain 29 397 1.3E-171 T 23-04-2016 CYCME_RS00030 38d7d94e28f7c65f8312115f24df2536 428 SUPERFAMILY SSF53822 28 400 4.71E-86 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CYCME_RS00030 38d7d94e28f7c65f8312115f24df2536 428 Gene3D G3DSA:3.40.50.2300 144 334 3.7E-71 T 23-04-2016 CYCME_RS00030 38d7d94e28f7c65f8312115f24df2536 428 PANTHER PTHR30483 3 410 1.1E-199 T 23-04-2016 CYCME_RS00030 38d7d94e28f7c65f8312115f24df2536 428 PANTHER PTHR30483:SF8 3 410 1.1E-199 T 23-04-2016 CYCME_RS00030 38d7d94e28f7c65f8312115f24df2536 428 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 29 394 3.3E-173 T 23-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA CYCME_RS00890 3139d7816f68b0026c11b8229707b510 117 Pfam PF09842 Predicted membrane protein (DUF2069) 13 113 8.9E-31 T 23-04-2016 IPR018643 Protein of unknown function DUF2069, membrane CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 23-04-2016 IPR018336 Ribonuclease PH, conserved site CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 47.701 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 Gene3D G3DSA:3.30.230.70 6 237 2.8E-32 T 23-04-2016 IPR027408 PNPase/RNase PH domain CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 SUPERFAMILY SSF54211 1 181 5.06E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 PANTHER PTHR11953 1 236 3.7E-76 T 23-04-2016 CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 SUPERFAMILY SSF55666 153 237 1.44E-23 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 223 1.2E-10 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 1.7E-22 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.9E-115 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 CYCME_RS03020 5488b69754f832de169a9ff832da995f 238 PANTHER PTHR11953:SF0 1 236 3.7E-76 T 23-04-2016 CYCME_RS02780 0287f21854104402b958e02ee2ef2c67 668 PIRSF PIRSF001265 2 668 5.0E-234 T 23-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 CYCME_RS02780 0287f21854104402b958e02ee2ef2c67 668 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 668 23.052 T 23-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 CYCME_RS02780 0287f21854104402b958e02ee2ef2c67 668 PANTHER PTHR31998 7 667 4.4E-294 T 23-04-2016 CYCME_RS02780 0287f21854104402b958e02ee2ef2c67 668 Pfam PF03030 Inorganic H+ pyrophosphatase 14 663 2.6E-246 T 23-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 CYCME_RS02780 0287f21854104402b958e02ee2ef2c67 668 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 5 667 2.8E-227 T 23-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 CYCME_RS02780 0287f21854104402b958e02ee2ef2c67 668 PANTHER PTHR31998:SF0 7 667 4.4E-294 T 23-04-2016 CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 Gene3D G3DSA:3.90.870.10 1 207 5.2E-96 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 PANTHER PTHR21327:SF6 1 366 4.0E-144 T 23-04-2016 CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 5 196 1.1E-81 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 Pfam PF00925 GTP cyclohydrolase II 207 365 7.7E-37 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 PANTHER PTHR21327 1 366 4.0E-144 T 23-04-2016 CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 PIRSF PIRSF001259 1 367 2.1E-119 T 23-04-2016 CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 SUPERFAMILY SSF55821 2 201 1.4E-83 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 SUPERFAMILY SSF142695 202 366 4.05E-41 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 36.761 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04285 81e71132a0e52595adefe881c97bf303 367 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 2 197 3.8E-72 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 479 4.6E-144 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 PANTHER PTHR32248:SF4 1 482 3.3E-153 T 23-04-2016 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 PRINTS PR00045 Sigma-54 factor signature 381 393 5.9E-30 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 PRINTS PR00045 Sigma-54 factor signature 191 208 5.9E-30 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 PRINTS PR00045 Sigma-54 factor signature 455 473 5.9E-30 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 PRINTS PR00045 Sigma-54 factor signature 397 408 5.9E-30 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 PANTHER PTHR32248 1 482 3.3E-153 T 23-04-2016 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 6.0E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 PIRSF PIRSF000774 1 482 6.9E-150 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 Pfam PF04963 Sigma-54 factor, core binding domain 116 308 8.6E-55 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 369 388 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 460 467 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03995 71199264a49bbcc09d1bdd2e447ce380 482 Pfam PF04552 Sigma-54, DNA binding domain 322 480 1.5E-68 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding CYCME_RS09755 011be27351e25c4160eefb5471693d75 826 PANTHER PTHR30287 2 826 4.1E-134 T 23-04-2016 CYCME_RS09755 011be27351e25c4160eefb5471693d75 826 Pfam PF02687 FtsX-like permease family 260 376 1.2E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CYCME_RS09755 011be27351e25c4160eefb5471693d75 826 Pfam PF02687 FtsX-like permease family 706 819 2.8E-10 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 PANTHER PTHR10277:SF3 1 335 2.6E-101 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 340 192.38 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 PANTHER PTHR10277 1 335 2.6E-101 T 23-04-2016 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 SUPERFAMILY SSF89000 290 338 6.67E-15 T 23-04-2016 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 Gene3D G3DSA:3.20.20.70 6 266 1.6E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 335 1.0E-23 T 23-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 Gene3D G3DSA:1.10.8.60 277 339 1.8E-30 T 23-04-2016 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 Pfam PF00682 HMGL-like 7 266 4.5E-61 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 Pfam PF07836 DmpG-like communication domain 276 337 1.9E-29 T 23-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 338 2.6E-159 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS10220 fd198146b1318226e97f1a66ca777998 340 SUPERFAMILY SSF51569 4 268 2.01E-71 T 23-04-2016 CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 SUPERFAMILY SSF51735 3 256 8.86E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PANTHER PTHR13078 1 293 2.6E-128 T 23-04-2016 CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 3.4E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 3.4E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 Gene3D G3DSA:3.40.50.720 3 257 7.2E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 247 1.7E-44 T 23-04-2016 CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PANTHER PTHR13078:SF55 1 293 2.6E-128 T 23-04-2016 CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 202 1.3E-7 T 23-04-2016 CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.4E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.4E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.4E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 4.4E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.4E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05805 589d9f1175eb671d156ce0969ea3be5c 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.4E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00090 1a0d03bda5bb0c359452fae248ee8f73 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 7 202 47.262 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CYCME_RS00090 1a0d03bda5bb0c359452fae248ee8f73 204 PANTHER PTHR31715 8 204 3.7E-123 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CYCME_RS00090 1a0d03bda5bb0c359452fae248ee8f73 204 PIRSF PIRSF005624 2 203 5.7E-51 T 23-04-2016 CYCME_RS00090 1a0d03bda5bb0c359452fae248ee8f73 204 SUPERFAMILY SSF52540 5 200 9.92E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00090 1a0d03bda5bb0c359452fae248ee8f73 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 180 1.7E-41 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CYCME_RS00090 1a0d03bda5bb0c359452fae248ee8f73 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 9 201 3.5E-106 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CYCME_RS00090 1a0d03bda5bb0c359452fae248ee8f73 204 Gene3D G3DSA:3.40.50.300 10 195 5.3E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 Pfam PF04898 Glutamate synthase central domain 467 746 2.1E-105 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 SUPERFAMILY SSF56235 21 438 2.25E-142 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 Pfam PF00310 Glutamine amidotransferases class-II 21 435 2.6E-167 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 PANTHER PTHR11938:SF1 10 1489 0.0 T 23-04-2016 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 SUPERFAMILY SSF69336 1231 1477 3.01E-85 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 Pfam PF01645 Conserved region in glutamate synthase 802 1166 1.1E-152 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 Pfam PF01493 GXGXG motif 1246 1432 8.5E-76 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 PANTHER PTHR11938 10 1489 0.0 T 23-04-2016 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 SUPERFAMILY SSF51395 454 1199 6.92E-252 T 23-04-2016 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 Gene3D G3DSA:3.20.20.70 822 1206 5.6E-162 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 Gene3D G3DSA:2.160.20.60 1229 1477 3.5E-91 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 Gene3D G3DSA:3.60.20.10 21 443 2.9E-162 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS00320 3ca870ff28a19b7ddab808398427758e 1489 Gene3D G3DSA:3.20.20.70 458 787 1.4E-93 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 Gene3D G3DSA:3.90.1260.10 163 361 7.7E-93 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 SUPERFAMILY SSF52402 7 210 3.09E-49 T 23-04-2016 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 PANTHER PTHR11587 4 405 9.7E-226 T 23-04-2016 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 PANTHER PTHR11587:SF2 4 405 9.7E-226 T 23-04-2016 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 405 51.381 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 Gene3D G3DSA:3.40.50.620 7 162 5.6E-66 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 Pfam PF00764 Arginosuccinate synthase 10 400 5.9E-152 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 SUPERFAMILY SSF69864 179 403 5.76E-93 T 23-04-2016 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 Gene3D G3DSA:1.20.5.470 376 398 5.1E-6 T 23-04-2016 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 403 1.2E-140 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS02630 2916dba0fd4787f517d09c7e718bf855 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS06875 f8bd70b8f8e3ba05cffd48caf31804ee 332 PANTHER PTHR22916 10 331 2.0E-23 T 23-04-2016 CYCME_RS06875 f8bd70b8f8e3ba05cffd48caf31804ee 332 SUPERFAMILY SSF53448 8 279 2.53E-34 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06875 f8bd70b8f8e3ba05cffd48caf31804ee 332 Gene3D G3DSA:3.90.550.10 10 216 3.8E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06875 f8bd70b8f8e3ba05cffd48caf31804ee 332 Pfam PF00535 Glycosyl transferase family 2 12 138 1.4E-13 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS06875 f8bd70b8f8e3ba05cffd48caf31804ee 332 Pfam PF13632 Glycosyl transferase family group 2 150 276 7.7E-8 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 PANTHER PTHR11933:SF10 1 360 1.3E-199 T 23-04-2016 CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 PANTHER PTHR11933 1 360 1.3E-199 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 358 39.865 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 357 1.1E-143 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 SUPERFAMILY SSF52402 2 241 2.43E-54 T 23-04-2016 CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 Pfam PF03054 tRNA methyl transferase 4 357 3.2E-142 T 23-04-2016 CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 Gene3D G3DSA:2.30.30.280 210 277 2.2E-33 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 Gene3D G3DSA:2.40.30.10 280 360 5.7E-32 T 23-04-2016 CYCME_RS06155 d77e1b23fe3221302affeeda08e6024d 365 Gene3D G3DSA:3.40.50.620 2 209 3.4E-96 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS11795 692590e52dc0dadd7e50e51830dbc0a0 140 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 1 140 3.5E-44 T 23-04-2016 IPR014351 Conserved hypothetical protein CHP00701 CYCME_RS11795 692590e52dc0dadd7e50e51830dbc0a0 140 PIRSF PIRSF004638 1 140 2.5E-54 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 CYCME_RS11795 692590e52dc0dadd7e50e51830dbc0a0 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 1.7E-49 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 CYCME_RS11795 692590e52dc0dadd7e50e51830dbc0a0 140 PANTHER PTHR40255 1 140 1.3E-51 T 23-04-2016 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 Gene3D G3DSA:2.40.110.10 121 219 7.1E-38 T 23-04-2016 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 Gene3D G3DSA:1.20.140.10 220 378 4.2E-52 T 23-04-2016 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 118 2.3E-30 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 SUPERFAMILY SSF56645 2 242 2.09E-79 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 4.6E-23 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 Gene3D G3DSA:1.10.540.10 3 118 7.6E-33 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 SUPERFAMILY SSF47203 228 378 1.3E-40 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 4.7E-38 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 PANTHER PTHR10909:SF325 1 384 1.6E-203 T 23-04-2016 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CYCME_RS05915 dc246f3cde16940eda4f5799b855c928 386 PANTHER PTHR10909 1 384 1.6E-203 T 23-04-2016 CYCME_RS01405 384fd41660ed620d738aaef8af32b4df 518 Pfam PF00916 Sulfate permease family 12 371 4.5E-52 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CYCME_RS01405 384fd41660ed620d738aaef8af32b4df 518 PANTHER PTHR11814:SF76 10 483 1.2E-167 T 23-04-2016 CYCME_RS01405 384fd41660ed620d738aaef8af32b4df 518 PANTHER PTHR11814 10 483 1.2E-167 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 CYCME_RS01405 384fd41660ed620d738aaef8af32b4df 518 SUPERFAMILY SSF52091 407 497 2.35E-14 T 23-04-2016 IPR002645 STAS domain CYCME_RS01405 384fd41660ed620d738aaef8af32b4df 518 Gene3D G3DSA:3.30.750.24 407 497 1.5E-14 T 23-04-2016 IPR002645 STAS domain CYCME_RS01405 384fd41660ed620d738aaef8af32b4df 518 Pfam PF01740 STAS domain 410 497 4.0E-9 T 23-04-2016 IPR002645 STAS domain CYCME_RS00615 770969231b1351de6e253efd75b2948a 231 Gene3D G3DSA:3.40.50.880 1 206 4.9E-59 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS00615 770969231b1351de6e253efd75b2948a 231 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 45 135 0.006 T 23-04-2016 CYCME_RS00615 770969231b1351de6e253efd75b2948a 231 Pfam PF00117 Glutamine amidotransferase class-I 41 181 1.9E-21 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CYCME_RS00615 770969231b1351de6e253efd75b2948a 231 PANTHER PTHR11922:SF45 42 188 6.3E-61 T 23-04-2016 CYCME_RS00615 770969231b1351de6e253efd75b2948a 231 SUPERFAMILY SSF52317 1 186 8.74E-54 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS00615 770969231b1351de6e253efd75b2948a 231 PANTHER PTHR11922 42 188 6.3E-61 T 23-04-2016 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 SUPERFAMILY SSF117892 52 189 1.22E-28 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 PIRSF PIRSF005651 1 285 3.0E-94 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 PRINTS PR00721 Stomatin signature 178 199 7.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 PRINTS PR00721 Stomatin signature 27 49 7.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 PRINTS PR00721 Stomatin signature 75 96 7.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 PRINTS PR00721 Stomatin signature 159 177 7.5E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 Pfam PF01145 SPFH domain / Band 7 family 24 198 1.0E-32 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 PANTHER PTHR10264:SF80 1 284 5.4E-85 T 23-04-2016 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 PANTHER PTHR10264 1 284 5.4E-85 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 TIGRFAM TIGR01932 hflC: HflC protein 151 282 6.8E-44 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 CYCME_RS04475 f4a3a7a015fcc111abf6f1d35a989dfa 285 SMART SM00244 20 183 5.7E-39 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS04335 463cdf687c3b6be4e3500a66a65227b9 302 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 301 19.371 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS04335 463cdf687c3b6be4e3500a66a65227b9 302 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 220 2.1E-80 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS04335 463cdf687c3b6be4e3500a66a65227b9 302 Gene3D G3DSA:2.30.130.10 244 302 3.6E-4 T 23-04-2016 IPR015947 PUA-like domain CYCME_RS04335 463cdf687c3b6be4e3500a66a65227b9 302 SUPERFAMILY SSF55120 11 223 5.47E-81 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS04335 463cdf687c3b6be4e3500a66a65227b9 302 PANTHER PTHR13767:SF2 5 301 1.6E-112 T 23-04-2016 CYCME_RS04335 463cdf687c3b6be4e3500a66a65227b9 302 PANTHER PTHR13767 5 301 1.6E-112 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS04335 463cdf687c3b6be4e3500a66a65227b9 302 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 181 5.3E-59 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CYCME_RS04335 463cdf687c3b6be4e3500a66a65227b9 302 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 241 1.6E-17 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 SUPERFAMILY SSF46894 119 216 2.27E-24 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 SMART SM00862 145 216 1.6E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 Gene3D G3DSA:3.40.50.2300 2 121 1.4E-37 T 23-04-2016 CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 Gene3D G3DSA:1.10.10.10 125 216 7.7E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 215 5.8E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 SMART SM00448 1 112 1.4E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 Pfam PF00072 Response regulator receiver domain 3 112 4.2E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 PANTHER PTHR26402 1 216 2.0E-85 T 23-04-2016 CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 PANTHER PTHR26402:SF279 1 216 2.0E-85 T 23-04-2016 CYCME_RS08550 afaeb8ec79ac22d2105e349cb4b9bb3c 219 SUPERFAMILY SSF52172 2 124 2.85E-38 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 508 172.583 T 23-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 3 442 6.4E-172 T 23-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 PANTHER PTHR11780:SF1 1 478 9.4E-198 T 23-04-2016 CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 Pfam PF13183 4Fe-4S dicluster domain 371 426 1.9E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 Pfam PF10531 SLBB domain 292 341 3.0E-15 T 23-04-2016 IPR019554 Soluble ligand binding domain CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 279 1.8E-48 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 SUPERFAMILY SSF142019 87 300 5.49E-58 T 23-04-2016 CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 373 384 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 412 423 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 PANTHER PTHR11780 1 478 9.4E-198 T 23-04-2016 CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 Gene3D G3DSA:1.10.1060.10 356 445 3.0E-16 T 23-04-2016 CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 Gene3D G3DSA:2.40.50.100 42 84 1.7E-4 T 23-04-2016 CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 SUPERFAMILY SSF46548 332 440 1.44E-19 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CYCME_RS00810 0f7b0a8d262844e9da9f1cad3871a43d 508 Pfam PF13375 RnfC Barrel sandwich hybrid domain 4 106 4.9E-34 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 Pfam PF01590 GAF domain 27 158 3.9E-11 T 23-04-2016 IPR003018 GAF domain GO:0005515 CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 319 9.0E-38 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 SMART SM00065 26 168 4.6E-16 T 23-04-2016 IPR003018 GAF domain GO:0005515 CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 PANTHER PTHR33121 32 156 4.7E-46 T 23-04-2016 CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 SUPERFAMILY SSF55781 27 160 8.51E-29 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 SMART SM00267 154 319 5.1E-34 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 Gene3D G3DSA:3.30.70.270 166 319 1.1E-40 T 23-04-2016 CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 Gene3D G3DSA:3.30.450.40 11 156 2.9E-14 T 23-04-2016 IPR029016 GAF domain-like CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 PANTHER PTHR33121:SF7 32 156 4.7E-46 T 23-04-2016 CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 319 3.5E-37 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10435 b2684522e329c8b19f79791b74ca95b2 320 SUPERFAMILY SSF55073 169 319 1.33E-37 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS08890 9f502e0860d2e543fcd4d3ed4789f30d 221 Pfam PF03922 OmpW family 28 221 6.8E-61 T 23-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 CYCME_RS08890 9f502e0860d2e543fcd4d3ed4789f30d 221 Gene3D G3DSA:2.40.160.20 27 221 5.7E-61 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CYCME_RS08890 9f502e0860d2e543fcd4d3ed4789f30d 221 PANTHER PTHR36920:SF1 1 221 1.5E-62 T 23-04-2016 CYCME_RS08890 9f502e0860d2e543fcd4d3ed4789f30d 221 SUPERFAMILY SSF56925 27 221 4.45E-31 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CYCME_RS08890 9f502e0860d2e543fcd4d3ed4789f30d 221 PANTHER PTHR36920 1 221 1.5E-62 T 23-04-2016 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 4.4E-130 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 Gene3D G3DSA:3.40.47.10 144 195 5.6E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 Gene3D G3DSA:3.40.47.10 277 392 5.6E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 9.3E-46 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 Pfam PF00108 Thiolase, N-terminal domain 6 261 6.4E-92 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 SUPERFAMILY SSF53901 272 392 3.73E-41 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 PANTHER PTHR18919:SF110 1 393 2.0E-208 T 23-04-2016 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 Gene3D G3DSA:3.40.47.10 5 125 7.6E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 Gene3D G3DSA:3.40.47.10 196 276 7.6E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 PANTHER PTHR18919 1 393 2.0E-208 T 23-04-2016 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 SUPERFAMILY SSF53901 6 270 2.0E-79 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05860 161cdc131d4ce6ea85ad36ceca0d6246 393 PIRSF PIRSF000429 1 393 1.3E-118 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS08480 1f27a86348aaeab2066e909aebe7d9e6 344 PANTHER PTHR30480 10 300 1.4E-111 T 23-04-2016 CYCME_RS08480 1f27a86348aaeab2066e909aebe7d9e6 344 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 19 311 1.2E-79 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CYCME_RS08480 1f27a86348aaeab2066e909aebe7d9e6 344 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 9 344 48.479 T 23-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 CYCME_RS08480 1f27a86348aaeab2066e909aebe7d9e6 344 PANTHER PTHR30480:SF7 10 300 1.4E-111 T 23-04-2016 CYCME_RS08480 1f27a86348aaeab2066e909aebe7d9e6 344 Gene3D G3DSA:3.20.20.300 9 314 3.3E-90 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CYCME_RS08480 1f27a86348aaeab2066e909aebe7d9e6 344 SUPERFAMILY SSF51445 9 304 7.79E-83 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 7.7E-29 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 7.7E-29 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 7.7E-29 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 223 7.7E-29 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 373 2.4E-24 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 SUPERFAMILY SSF55957 375 456 1.44E-17 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 Gene3D G3DSA:3.40.120.10 173 255 5.2E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 PANTHER PTHR22573:SF18 8 457 5.2E-182 T 23-04-2016 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 SUPERFAMILY SSF53738 154 262 4.71E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 259 2.3E-23 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 Gene3D G3DSA:3.40.120.10 256 369 2.8E-40 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 PANTHER PTHR22573 8 457 5.2E-182 T 23-04-2016 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 136 4.2E-35 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 SUPERFAMILY SSF53738 264 369 3.06E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 450 7.3E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 Gene3D G3DSA:3.40.120.10 6 138 2.3E-38 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 SUPERFAMILY SSF53738 4 178 7.46E-40 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04770 8fe085c5e5e2e2025a9b35e0b3433d4c 459 Gene3D G3DSA:3.30.310.50 376 455 1.1E-17 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS11135 b8f672c7723ceeff2651602ef1dae786 360 Pfam PF00953 Glycosyl transferase family 4 99 283 3.2E-37 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11135 b8f672c7723ceeff2651602ef1dae786 360 PANTHER PTHR22926 2 360 2.6E-173 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11135 b8f672c7723ceeff2651602ef1dae786 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.811 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11135 b8f672c7723ceeff2651602ef1dae786 360 PANTHER PTHR22926:SF5 2 360 2.6E-173 T 23-04-2016 CYCME_RS11135 b8f672c7723ceeff2651602ef1dae786 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11135 b8f672c7723ceeff2651602ef1dae786 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 8.8E-137 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11135 b8f672c7723ceeff2651602ef1dae786 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 7.5E-5 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS07125 e8658a9059c9a670a959b12ef64345f4 88 PANTHER PTHR33609 2 88 1.4E-30 T 23-04-2016 CYCME_RS07125 e8658a9059c9a670a959b12ef64345f4 88 Pfam PF01527 Transposase 2 71 4.4E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS07125 e8658a9059c9a670a959b12ef64345f4 88 SUPERFAMILY SSF46689 1 74 3.05E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07125 e8658a9059c9a670a959b12ef64345f4 88 Gene3D G3DSA:1.10.10.60 18 84 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07105 e8658a9059c9a670a959b12ef64345f4 88 PANTHER PTHR33609 2 88 1.4E-30 T 23-04-2016 CYCME_RS07105 e8658a9059c9a670a959b12ef64345f4 88 Pfam PF01527 Transposase 2 71 4.4E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS07105 e8658a9059c9a670a959b12ef64345f4 88 SUPERFAMILY SSF46689 1 74 3.05E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07105 e8658a9059c9a670a959b12ef64345f4 88 Gene3D G3DSA:1.10.10.60 18 84 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07095 e8658a9059c9a670a959b12ef64345f4 88 PANTHER PTHR33609 2 88 1.4E-30 T 23-04-2016 CYCME_RS07095 e8658a9059c9a670a959b12ef64345f4 88 Pfam PF01527 Transposase 2 71 4.4E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS07095 e8658a9059c9a670a959b12ef64345f4 88 SUPERFAMILY SSF46689 1 74 3.05E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07095 e8658a9059c9a670a959b12ef64345f4 88 Gene3D G3DSA:1.10.10.60 18 84 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07135 e8658a9059c9a670a959b12ef64345f4 88 PANTHER PTHR33609 2 88 1.4E-30 T 23-04-2016 CYCME_RS07135 e8658a9059c9a670a959b12ef64345f4 88 Pfam PF01527 Transposase 2 71 4.4E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS07135 e8658a9059c9a670a959b12ef64345f4 88 SUPERFAMILY SSF46689 1 74 3.05E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07135 e8658a9059c9a670a959b12ef64345f4 88 Gene3D G3DSA:1.10.10.60 18 84 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07115 e8658a9059c9a670a959b12ef64345f4 88 PANTHER PTHR33609 2 88 1.4E-30 T 23-04-2016 CYCME_RS07115 e8658a9059c9a670a959b12ef64345f4 88 Pfam PF01527 Transposase 2 71 4.4E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS07115 e8658a9059c9a670a959b12ef64345f4 88 SUPERFAMILY SSF46689 1 74 3.05E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS07115 e8658a9059c9a670a959b12ef64345f4 88 Gene3D G3DSA:1.10.10.60 18 84 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS06260 e8658a9059c9a670a959b12ef64345f4 88 PANTHER PTHR33609 2 88 1.4E-30 T 23-04-2016 CYCME_RS06260 e8658a9059c9a670a959b12ef64345f4 88 Pfam PF01527 Transposase 2 71 4.4E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CYCME_RS06260 e8658a9059c9a670a959b12ef64345f4 88 SUPERFAMILY SSF46689 1 74 3.05E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS06260 e8658a9059c9a670a959b12ef64345f4 88 Gene3D G3DSA:1.10.10.60 18 84 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS11825 62c4b756a883c5ea5f578cc1397eb6ab 167 Pfam PF16702 Domain of unknown function (DUF5063) 8 164 1.2E-37 T 23-04-2016 IPR032025 Protein of unknown function DUF5063 CYCME_RS02165 a2ade97ee8766472e649992fea4f480f 358 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 331 7.6E-95 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02165 a2ade97ee8766472e649992fea4f480f 358 Gene3D G3DSA:3.90.25.10 201 349 6.1E-58 T 23-04-2016 CYCME_RS02165 a2ade97ee8766472e649992fea4f480f 358 PANTHER PTHR10366:SF41 2 358 1.0E-182 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS02165 a2ade97ee8766472e649992fea4f480f 358 Gene3D G3DSA:3.40.50.720 1 200 1.3E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02165 a2ade97ee8766472e649992fea4f480f 358 PANTHER PTHR10366 2 358 1.0E-182 T 23-04-2016 CYCME_RS02165 a2ade97ee8766472e649992fea4f480f 358 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 344 5.8E-152 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS02165 a2ade97ee8766472e649992fea4f480f 358 SUPERFAMILY SSF51735 1 351 2.33E-91 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05670 3fd08b3410f6a3c6b38a60f55635837f 112 Pfam PF04320 Protein with unknown function (DUF469) 9 109 1.9E-27 T 23-04-2016 IPR007416 Protein of unknown function DUF469 CYCME_RS05670 3fd08b3410f6a3c6b38a60f55635837f 112 PANTHER PTHR38778:SF1 4 108 2.3E-14 T 23-04-2016 CYCME_RS05670 3fd08b3410f6a3c6b38a60f55635837f 112 PANTHER PTHR38778 4 108 2.3E-14 T 23-04-2016 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 Pfam PF00175 Oxidoreductase NAD-binding domain 111 216 6.3E-12 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 SUPERFAMILY SSF52343 103 237 6.55E-27 T 23-04-2016 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 Gene3D G3DSA:2.40.30.10 5 98 6.6E-17 T 23-04-2016 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 PANTHER PTHR19370 2 237 6.6E-35 T 23-04-2016 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 PANTHER PTHR19370:SF32 2 237 6.6E-35 T 23-04-2016 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 3.0E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 202 210 3.0E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 51 58 3.0E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 110 129 3.0E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 PRINTS PR00410 Phenol hydroxylase reductase family signature 94 103 3.0E-10 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 SUPERFAMILY SSF63380 8 104 1.99E-17 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 Pfam PF00970 Oxidoreductase FAD-binding domain 9 99 5.1E-13 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CYCME_RS10290 8faa3088e41d998950678e6520704bdf 239 Gene3D G3DSA:3.40.50.80 103 237 2.1E-27 T 23-04-2016 CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 306 327 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 PANTHER PTHR10657 200 523 2.0E-74 T 23-04-2016 CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 PANTHER PTHR10657 1 172 2.0E-74 T 23-04-2016 CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 SUPERFAMILY SSF54534 260 366 7.85E-27 T 23-04-2016 CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 SUPERFAMILY SSF109998 40 166 2.12E-25 T 23-04-2016 IPR027304 Trigger factor/SurA domain CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 SUPERFAMILY SSF109998 200 243 2.12E-25 T 23-04-2016 IPR027304 Trigger factor/SurA domain CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 Pfam PF13624 SurA N-terminal domain 1 162 9.1E-45 T 23-04-2016 CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 Pfam PF13616 PPIC-type PPIASE domain 265 367 1.1E-28 T 23-04-2016 CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 Gene3D G3DSA:3.10.50.40 260 386 1.6E-36 T 23-04-2016 CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 PANTHER PTHR10657:SF13 200 523 2.0E-74 T 23-04-2016 CYCME_RS08060 d3f1d14696bcc485ebacd4b8fdd92f6c 635 PANTHER PTHR10657:SF13 1 172 2.0E-74 T 23-04-2016 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 Pfam PF04055 Radical SAM superfamily 66 221 1.1E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 Hamap MF_01694 Biotin synthase [bioB]. 21 329 41.631 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 326 1.5E-17 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 PANTHER PTHR22976 18 328 5.5E-159 T 23-04-2016 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 TIGRFAM TIGR00433 bioB: biotin synthase 30 326 1.0E-124 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 SMART SM00729 59 271 2.0E-38 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 PANTHER PTHR22976:SF1 18 328 5.5E-159 T 23-04-2016 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 SUPERFAMILY SSF102114 22 328 5.89E-86 T 23-04-2016 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 PIRSF PIRSF001619 4 331 1.4E-134 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 Gene3D G3DSA:3.20.20.70 22 328 3.5E-97 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS03075 8367f7c7f80bf57dfd1ea7f87ef7cc67 331 SMART SM00876 236 328 1.8E-41 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 SUPERFAMILY SSF53732 1 463 1.03E-162 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 4.9E-151 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 Gene3D G3DSA:3.30.499.10 332 464 1.6E-58 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 133 148 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 119 132 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 286 300 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 195 208 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 209 222 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 82 95 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 399 412 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 343 354 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PRINTS PR00415 Aconitase family signature 108 116 4.8E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 58.161 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PANTHER PTHR11670:SF38 3 307 6.2E-254 T 23-04-2016 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PANTHER PTHR11670:SF38 327 462 6.2E-254 T 23-04-2016 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 Gene3D G3DSA:3.30.499.10 1 158 1.5E-26 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 4.8E-231 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PANTHER PTHR11670 3 307 6.2E-254 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 PANTHER PTHR11670 327 462 6.2E-254 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11315 6c9d740ad132172107a334af2004e69e 466 Gene3D G3DSA:3.40.1060.10 167 280 1.5E-39 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS08340 45f634f250dc99e32d327ab925eddd60 133 Gene3D G3DSA:1.10.10.10 1 39 4.0E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08340 45f634f250dc99e32d327ab925eddd60 133 PANTHER PTHR33602:SF1 1 132 6.2E-30 T 23-04-2016 CYCME_RS08340 45f634f250dc99e32d327ab925eddd60 133 Pfam PF02631 RecX family 16 130 1.5E-28 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 CYCME_RS08340 45f634f250dc99e32d327ab925eddd60 133 Gene3D G3DSA:1.10.10.10 40 81 4.4E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08340 45f634f250dc99e32d327ab925eddd60 133 Gene3D G3DSA:1.10.10.10 84 130 1.7E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08340 45f634f250dc99e32d327ab925eddd60 133 PANTHER PTHR33602 1 132 6.2E-30 T 23-04-2016 CYCME_RS10115 78e7aed4e28933e2600b9beb4bd720f8 273 PANTHER PTHR37838:SF1 13 272 1.8E-86 T 23-04-2016 CYCME_RS10115 78e7aed4e28933e2600b9beb4bd720f8 273 PANTHER PTHR37838 13 272 1.8E-86 T 23-04-2016 CYCME_RS10115 78e7aed4e28933e2600b9beb4bd720f8 273 SMART SM00900 158 259 5.5E-29 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CYCME_RS10115 78e7aed4e28933e2600b9beb4bd720f8 273 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 20 267 2.5E-81 T 23-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CYCME_RS10115 78e7aed4e28933e2600b9beb4bd720f8 273 PIRSF PIRSF009437 13 273 2.3E-91 T 23-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CYCME_RS10115 78e7aed4e28933e2600b9beb4bd720f8 273 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 21 272 35.614 T 23-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CYCME_RS10115 78e7aed4e28933e2600b9beb4bd720f8 273 Pfam PF04205 FMN-binding domain 158 256 3.0E-16 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CYCME_RS03090 7e5448686a0c533cfadbfe255c18d235 271 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 19 269 5.0E-70 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 CYCME_RS03090 7e5448686a0c533cfadbfe255c18d235 271 Pfam PF08241 Methyltransferase domain 56 152 1.8E-22 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CYCME_RS03090 7e5448686a0c533cfadbfe255c18d235 271 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 11 269 30.274 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 CYCME_RS03090 7e5448686a0c533cfadbfe255c18d235 271 PANTHER PTHR13090:SF3 33 267 8.9E-36 T 23-04-2016 CYCME_RS03090 7e5448686a0c533cfadbfe255c18d235 271 PANTHER PTHR13090 33 267 8.9E-36 T 23-04-2016 CYCME_RS03090 7e5448686a0c533cfadbfe255c18d235 271 SUPERFAMILY SSF53335 16 269 3.99E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS03090 7e5448686a0c533cfadbfe255c18d235 271 Gene3D G3DSA:3.40.50.150 45 269 1.2E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS10715 50648630f852cf3df866cdaa39bd00ae 134 Pfam PF02810 SEC-C motif 116 133 4.1E-11 T 23-04-2016 IPR004027 SEC-C motif CYCME_RS10715 50648630f852cf3df866cdaa39bd00ae 134 SUPERFAMILY SSF54427 2 104 8.32E-30 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS10715 50648630f852cf3df866cdaa39bd00ae 134 SUPERFAMILY SSF103642 114 132 1.23E-7 T 23-04-2016 CYCME_RS10715 50648630f852cf3df866cdaa39bd00ae 134 PANTHER PTHR33747 1 134 3.1E-12 T 23-04-2016 CYCME_RS10715 50648630f852cf3df866cdaa39bd00ae 134 Gene3D G3DSA:3.10.450.50 2 132 1.7E-41 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 501 507 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 SUPERFAMILY SSF81653 304 397 5.89E-27 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 SUPERFAMILY SSF81665 745 766 2.09E-13 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 SUPERFAMILY SSF81665 398 493 2.09E-13 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 SUPERFAMILY SSF81665 265 300 2.09E-13 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 SUPERFAMILY SSF56784 497 517 6.42E-53 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 SUPERFAMILY SSF56784 554 803 6.42E-53 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 204 806 1.1E-177 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 Gene3D G3DSA:3.40.1110.10 513 623 5.7E-16 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 Pfam PF04945 YHS domain 16 60 1.7E-19 T 23-04-2016 IPR007029 YHS domain CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 268 774 5.0E-91 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PANTHER PTHR24093:SF332 127 809 7.6E-228 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PANTHER PTHR24093:SF332 17 62 7.6E-228 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 224 805 1.3E-186 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 SMART SM00746 18 55 8.9E-10 T 23-04-2016 IPR011017 TRASH domain CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 Gene3D G3DSA:3.40.50.1000 624 764 2.6E-53 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 Gene3D G3DSA:3.40.50.1000 470 512 2.6E-53 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PANTHER PTHR24093 127 809 7.6E-228 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PANTHER PTHR24093 17 62 7.6E-228 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 Pfam PF00122 E1-E2 ATPase 267 490 2.7E-66 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00943 Copper-transporting ATPase signature 482 497 7.5E-6 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00943 Copper-transporting ATPase signature 673 690 7.5E-6 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00943 Copper-transporting ATPase signature 420 434 7.5E-6 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00943 Copper-transporting ATPase signature 266 285 7.5E-6 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00943 Copper-transporting ATPase signature 730 744 7.5E-6 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 499 513 8.4E-26 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 653 8.4E-26 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 8.4E-26 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 696 715 8.4E-26 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 731 8.4E-26 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 Pfam PF00702 haloacid dehalogenase-like hydrolase 495 710 2.3E-45 T 23-04-2016 CYCME_RS03295 1730a75e6cbd4c60ab67869ac60d72f7 810 Gene3D G3DSA:2.70.150.10 223 398 3.4E-31 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS07545 ee5eb6b750f477809c0e6010886056c7 394 PANTHER PTHR11751:SF302 12 392 5.7E-232 T 23-04-2016 CYCME_RS07545 ee5eb6b750f477809c0e6010886056c7 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CYCME_RS07545 ee5eb6b750f477809c0e6010886056c7 394 Pfam PF00155 Aminotransferase class I and II 31 366 4.1E-60 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CYCME_RS07545 ee5eb6b750f477809c0e6010886056c7 394 Gene3D G3DSA:3.40.640.10 44 257 6.2E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS07545 ee5eb6b750f477809c0e6010886056c7 394 PANTHER PTHR11751 12 392 5.7E-232 T 23-04-2016 CYCME_RS07545 ee5eb6b750f477809c0e6010886056c7 394 SUPERFAMILY SSF53383 1 389 2.96E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS07545 ee5eb6b750f477809c0e6010886056c7 394 Gene3D G3DSA:3.90.1150.10 258 389 2.5E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 SMART SM00052 299 544 2.0E-80 T 23-04-2016 IPR001633 EAL domain CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 Pfam PF00072 Response regulator receiver domain 161 269 3.5E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 SUPERFAMILY SSF141868 306 551 7.59E-78 T 23-04-2016 IPR001633 EAL domain CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 Gene3D G3DSA:3.20.20.450 305 551 3.8E-78 T 23-04-2016 IPR001633 EAL domain CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 PANTHER PTHR33121:SF13 297 551 6.6E-65 T 23-04-2016 CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 PANTHER PTHR33121 297 551 6.6E-65 T 23-04-2016 CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 SUPERFAMILY SSF52172 161 285 8.4E-16 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 SMART SM00448 159 274 2.2E-6 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 Pfam PF00563 EAL domain 305 539 6.3E-68 T 23-04-2016 IPR001633 EAL domain CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 Gene3D G3DSA:3.40.50.2300 161 282 1.7E-16 T 23-04-2016 CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 Gene3D G3DSA:1.20.120.50 9 135 7.9E-15 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CYCME_RS07290 ae01a06b64afa5f53d3f93322520fa82 557 SUPERFAMILY SSF47188 7 131 6.41E-13 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CYCME_RS06040 8ae4b42075f35bc4f9aec50f65519d9b 462 SUPERFAMILY SSF103378 7 455 3.01E-110 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 CYCME_RS06040 8ae4b42075f35bc4f9aec50f65519d9b 462 Gene3D G3DSA:3.30.1330.120 275 406 4.0E-26 T 23-04-2016 CYCME_RS06040 8ae4b42075f35bc4f9aec50f65519d9b 462 Pfam PF03972 MmgE/PrpD family 12 449 1.6E-115 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 CYCME_RS06040 8ae4b42075f35bc4f9aec50f65519d9b 462 PANTHER PTHR16943:SF8 7 462 3.1E-85 T 23-04-2016 CYCME_RS06040 8ae4b42075f35bc4f9aec50f65519d9b 462 PANTHER PTHR16943 7 462 3.1E-85 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 CYCME_RS10330 60c778dd7dd501438de234a04a651767 329 SUPERFAMILY SSF110296 53 278 3.14E-29 T 23-04-2016 CYCME_RS10330 60c778dd7dd501438de234a04a651767 329 Gene3D G3DSA:2.130.10.140 38 242 4.3E-24 T 23-04-2016 CYCME_RS10330 60c778dd7dd501438de234a04a651767 329 Pfam PF14870 Photosynthesis system II assembly factor YCF48 160 240 2.6E-12 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-14 T 23-04-2016 CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 SUPERFAMILY SSF54747 3 73 9.55E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 PANTHER PTHR11661 1 142 1.0E-70 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 Gene3D G3DSA:1.10.10.250 73 141 1.6E-30 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 8.4E-24 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.1E-64 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 Gene3D G3DSA:3.30.1550.10 2 72 1.8E-37 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 SMART SM00649 9 141 4.2E-84 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.6E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.349 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03600 19c9944e495dd3ffbb62f34576320d0e 143 SUPERFAMILY SSF46906 68 141 1.3E-25 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 SUPERFAMILY SSF55874 11 219 1.01E-65 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PANTHER PTHR11528 1 634 2.9E-304 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 SUPERFAMILY SSF54211 237 490 1.74E-89 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PRINTS PR00775 90kDa heat shock protein signature 196 214 9.81E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PRINTS PR00775 90kDa heat shock protein signature 126 148 9.81E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PRINTS PR00775 90kDa heat shock protein signature 81 98 9.81E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PRINTS PR00775 90kDa heat shock protein signature 32 54 9.81E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PRINTS PR00775 90kDa heat shock protein signature 99 116 9.81E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PRINTS PR00775 90kDa heat shock protein signature 178 195 9.81E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PRINTS PR00775 90kDa heat shock protein signature 11 31 9.81E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 Pfam PF00183 Hsp90 protein 225 632 1.0E-130 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 8 631 31.431 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 188 1.3E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PIRSF PIRSF002583 1 634 1.4E-212 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 SUPERFAMILY SSF110942 519 630 6.93E-39 T 23-04-2016 CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 31 40 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 PANTHER PTHR11528:SF44 1 634 2.9E-304 T 23-04-2016 CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 Gene3D G3DSA:3.30.565.10 11 220 2.0E-81 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09330 e9cf62dd0a9deb0efe789535b906951c 634 SMART SM00387 33 190 4.7E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 354 7.3E-27 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 SUPERFAMILY SSF48019 245 357 5.95E-27 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 Gene3D G3DSA:3.40.50.300 15 166 1.2E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 458 575 1.1E-14 T 23-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 9.6E-6 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 9.6E-6 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 PANTHER PTHR11669:SF0 1 380 4.7E-164 T 23-04-2016 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 PANTHER PTHR11669 1 380 4.7E-164 T 23-04-2016 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.7E-44 T 23-04-2016 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 SMART SM00382 37 178 8.5E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 SUPERFAMILY SSF52540 33 221 1.5E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 Gene3D G3DSA:1.10.8.60 167 242 3.1E-29 T 23-04-2016 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 Gene3D G3DSA:1.20.272.10 243 355 7.0E-36 T 23-04-2016 CYCME_RS04395 3bc20f406147b16be8dd19c735f3d0f7 579 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 350 4.7E-128 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 PANTHER PTHR21368 1 149 1.0E-44 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 3.3E-25 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 5.8E-46 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 Gene3D G3DSA:3.10.430.100 61 148 4.4E-27 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 SUPERFAMILY SSF55653 60 148 1.96E-24 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.254 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 SUPERFAMILY SSF55658 1 56 1.36E-16 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 Gene3D G3DSA:3.40.5.10 1 52 1.1E-22 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CYCME_RS09155 bdf55953f866e887f38a5a7efd39144b 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.3E-19 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CYCME_RS10440 76747d84275b48e65b28885fc220e590 560 Pfam PF02254 TrkA-N domain 401 515 4.4E-18 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CYCME_RS10440 76747d84275b48e65b28885fc220e590 560 PANTHER PTHR16254:SF6 6 555 3.7E-172 T 23-04-2016 CYCME_RS10440 76747d84275b48e65b28885fc220e590 560 Gene3D G3DSA:3.40.50.720 398 526 4.5E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10440 76747d84275b48e65b28885fc220e590 560 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 13 285 2.3E-72 T 23-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CYCME_RS10440 76747d84275b48e65b28885fc220e590 560 PANTHER PTHR16254 6 555 3.7E-172 T 23-04-2016 CYCME_RS10440 76747d84275b48e65b28885fc220e590 560 SUPERFAMILY SSF51735 400 526 2.67E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10440 76747d84275b48e65b28885fc220e590 560 Pfam PF00999 Sodium/hydrogen exchanger family 10 374 3.9E-66 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 Gene3D G3DSA:3.30.300.30 435 534 1.7E-26 T 23-04-2016 CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 PANTHER PTHR24096 1 540 3.2E-218 T 23-04-2016 CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 PANTHER PTHR24096:SF53 1 540 3.2E-218 T 23-04-2016 CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 180 191 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 Pfam PF00501 AMP-binding enzyme 38 440 5.3E-80 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 SUPERFAMILY SSF56801 6 537 5.63E-124 T 23-04-2016 CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 Gene3D G3DSA:3.40.50.980 187 337 1.5E-34 T 23-04-2016 CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 524 4.6E-16 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 Gene3D G3DSA:3.40.50.980 48 186 5.5E-28 T 23-04-2016 CYCME_RS05975 5c4b10c2d899afdd46b329503470adbf 540 Gene3D G3DSA:2.30.38.10 359 434 2.0E-17 T 23-04-2016 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 8 362 1.5E-163 T 23-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 Pfam PF13186 Iron-sulfur cluster-binding domain 241 306 5.0E-8 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 Pfam PF13353 4Fe-4S single cluster domain 19 118 1.3E-7 T 23-04-2016 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 SUPERFAMILY SSF102114 9 316 7.06E-80 T 23-04-2016 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 PANTHER PTHR11228:SF32 6 344 2.7E-105 T 23-04-2016 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 Gene3D G3DSA:3.20.20.70 7 325 1.2E-71 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 SMART SM00729 12 218 2.3E-4 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 241 334 9.6E-9 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 PIRSF PIRSF037420 3 355 1.2E-121 T 23-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 Pfam PF04055 Radical SAM superfamily 18 172 4.8E-25 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 371 174.008 T 23-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 PANTHER PTHR11228 6 344 2.7E-105 T 23-04-2016 CYCME_RS10645 c62600ffe9c4ce9b1bdb5562f1c5af6f 371 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 18 29 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 158 175 1.1E-9 T 23-04-2016 CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 196 216 1.1E-9 T 23-04-2016 CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 176 195 1.1E-9 T 23-04-2016 CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 PANTHER PTHR30128 5 219 4.3E-58 T 23-04-2016 CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 Pfam PF13488 Glycine zipper 38 82 7.4E-10 T 23-04-2016 CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 Pfam PF00691 OmpA family 112 207 2.1E-24 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 Gene3D G3DSA:3.30.1330.60 93 213 1.2E-40 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 SUPERFAMILY SSF103088 99 215 1.83E-39 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 PRINTS PR01021 OMPA domain signature 158 174 4.9E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 PRINTS PR01021 OMPA domain signature 113 135 4.9E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS03940 776a646df9b7fb9b4da5fa4f94afabb6 219 PRINTS PR01021 OMPA domain signature 143 158 4.9E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS00775 1b755ab7f165662967bed60f90e90977 197 PANTHER PTHR11260 1 183 1.5E-15 T 23-04-2016 CYCME_RS00775 1b755ab7f165662967bed60f90e90977 197 SUPERFAMILY SSF47616 77 182 2.46E-21 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS00775 1b755ab7f165662967bed60f90e90977 197 Gene3D G3DSA:3.40.30.10 1 71 2.3E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS00775 1b755ab7f165662967bed60f90e90977 197 Pfam PF13410 Glutathione S-transferase, C-terminal domain 109 170 7.7E-12 T 23-04-2016 CYCME_RS00775 1b755ab7f165662967bed60f90e90977 197 PANTHER PTHR11260:SF143 1 183 1.5E-15 T 23-04-2016 CYCME_RS00775 1b755ab7f165662967bed60f90e90977 197 Gene3D G3DSA:1.20.1050.10 77 184 2.0E-16 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS00775 1b755ab7f165662967bed60f90e90977 197 Pfam PF13417 Glutathione S-transferase, N-terminal domain 1 58 3.6E-11 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CYCME_RS00775 1b755ab7f165662967bed60f90e90977 197 SUPERFAMILY SSF52833 1 66 5.95E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS04910 b7ad7ca4f2da40e576c81a1da51a02ad 136 SUPERFAMILY SSF46785 6 132 7.18E-43 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS04910 b7ad7ca4f2da40e576c81a1da51a02ad 136 PANTHER PTHR33202 4 136 2.8E-44 T 23-04-2016 CYCME_RS04910 b7ad7ca4f2da40e576c81a1da51a02ad 136 Pfam PF01475 Ferric uptake regulator family 9 128 1.9E-45 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CYCME_RS04910 b7ad7ca4f2da40e576c81a1da51a02ad 136 Gene3D G3DSA:1.10.10.10 4 81 1.4E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS09615 7cb90795fab9d4f6b6b968f7ac2ca77a 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 1.3E-98 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CYCME_RS09615 7cb90795fab9d4f6b6b968f7ac2ca77a 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 1.2E-94 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CYCME_RS09615 7cb90795fab9d4f6b6b968f7ac2ca77a 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.6E-192 T 23-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 CYCME_RS09615 7cb90795fab9d4f6b6b968f7ac2ca77a 354 PANTHER PTHR30304 1 349 1.4E-119 T 23-04-2016 CYCME_RS09615 7cb90795fab9d4f6b6b968f7ac2ca77a 354 SUPERFAMILY SSF51569 3 329 2.78E-105 T 23-04-2016 CYCME_RS09615 7cb90795fab9d4f6b6b968f7ac2ca77a 354 Gene3D G3DSA:3.20.20.70 1 335 3.9E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09615 7cb90795fab9d4f6b6b968f7ac2ca77a 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CYCME_RS09615 7cb90795fab9d4f6b6b968f7ac2ca77a 354 PIRSF PIRSF001359 1 329 1.6E-85 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 PIRSF PIRSF000171 3 587 2.4E-43 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 Gene3D G3DSA:3.50.50.60 355 428 7.5E-124 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 Gene3D G3DSA:3.50.50.60 4 247 7.5E-124 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 597 3.2E-248 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 Gene3D G3DSA:1.20.58.100 437 543 7.7E-41 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 Gene3D G3DSA:4.10.80.40 544 597 2.6E-26 T 23-04-2016 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 SUPERFAMILY SSF46977 455 597 6.15E-51 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 PANTHER PTHR11632:SF51 3 592 0.0 T 23-04-2016 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 PANTHER PTHR11632 3 592 0.0 T 23-04-2016 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 SUPERFAMILY SSF51905 363 439 1.67E-81 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 SUPERFAMILY SSF51905 7 264 1.67E-81 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 Pfam PF02910 Fumarate reductase flavoprotein C-term 464 597 5.6E-45 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 Pfam PF00890 FAD binding domain 14 409 1.1E-122 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 Gene3D G3DSA:3.90.700.10 248 353 8.5E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 597 3.6E-297 T 23-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CYCME_RS07440 38bfb72a16dccfd7720807738aecd347 597 SUPERFAMILY SSF56425 241 359 3.44E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 SUPERFAMILY SSF50249 167 270 5.31E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 SUPERFAMILY SSF56091 36 193 1.77E-33 T 23-04-2016 CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 Pfam PF14743 DNA ligase OB-like domain 207 270 5.3E-25 T 23-04-2016 IPR029319 DNA ligase, OB-like domain CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 PANTHER PTHR10459:SF68 37 270 2.0E-42 T 23-04-2016 CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 PANTHER PTHR10459 37 270 2.0E-42 T 23-04-2016 CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 Pfam PF01068 ATP dependent DNA ligase domain 80 193 5.1E-10 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 Gene3D G3DSA:3.30.1490.70 146 176 8.5E-10 T 23-04-2016 CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 Gene3D G3DSA:3.30.1490.70 37 46 8.5E-10 T 23-04-2016 CYCME_RS01435 2434fa48b0bc2a48764817905f03d48a 275 Gene3D G3DSA:2.40.50.140 177 270 4.4E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS05420 49d51213c616c088bf785c316c7f3659 329 Gene3D G3DSA:3.40.50.300 11 171 1.5E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05420 49d51213c616c088bf785c316c7f3659 329 PANTHER PTHR11669:SF8 19 182 5.9E-41 T 23-04-2016 CYCME_RS05420 49d51213c616c088bf785c316c7f3659 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 211 322 1.4E-18 T 23-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS05420 49d51213c616c088bf785c316c7f3659 329 Gene3D G3DSA:1.20.272.10 214 318 1.4E-6 T 23-04-2016 CYCME_RS05420 49d51213c616c088bf785c316c7f3659 329 SUPERFAMILY SSF52540 9 209 1.98E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05420 49d51213c616c088bf785c316c7f3659 329 Pfam PF13177 DNA polymerase III, delta subunit 19 171 7.3E-40 T 23-04-2016 CYCME_RS05420 49d51213c616c088bf785c316c7f3659 329 PANTHER PTHR11669 19 182 5.9E-41 T 23-04-2016 CYCME_RS06200 c1ccec407fb0acb6decbca95f77e889c 257 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 239 40.009 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic CYCME_RS06200 c1ccec407fb0acb6decbca95f77e889c 257 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 89 6.3E-18 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 CYCME_RS06200 c1ccec407fb0acb6decbca95f77e889c 257 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 109 230 8.9E-38 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 CYCME_RS06200 c1ccec407fb0acb6decbca95f77e889c 257 PANTHER PTHR21367 12 242 2.7E-63 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase CYCME_RS06200 c1ccec407fb0acb6decbca95f77e889c 257 PIRSF PIRSF037208 3 248 8.9E-86 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic CYCME_RS06200 c1ccec407fb0acb6decbca95f77e889c 257 PANTHER PTHR21367:SF0 12 242 2.7E-63 T 23-04-2016 CYCME_RS06200 c1ccec407fb0acb6decbca95f77e889c 257 SUPERFAMILY SSF55729 82 238 1.36E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 SUPERFAMILY SSF57716 219 270 2.68E-17 T 23-04-2016 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 PANTHER PTHR22993 1 271 1.9E-127 T 23-04-2016 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 Gene3D G3DSA:3.20.190.10 2 131 5.0E-37 T 23-04-2016 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 SMART SM00898 2 116 3.6E-52 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 23-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 SUPERFAMILY SSF46946 132 224 5.76E-29 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 7.9E-28 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 43.404 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 SUPERFAMILY SSF81624 2 136 8.24E-41 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 Pfam PF06827 Zinc finger found in FPG and IleRS 244 270 8.7E-10 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 5.3E-33 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 Gene3D G3DSA:1.10.8.50 132 271 4.9E-51 T 23-04-2016 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.4E-97 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 SMART SM01232 131 223 7.7E-43 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CYCME_RS03215 cd15085ed89b620333fc1db2f3457aa8 271 PANTHER PTHR22993:SF15 1 271 1.9E-127 T 23-04-2016 CYCME_RS01730 bc3aecea3bfc3d423c00c2023d40db02 171 PANTHER PTHR10430 3 171 1.7E-68 T 23-04-2016 CYCME_RS01730 bc3aecea3bfc3d423c00c2023d40db02 171 SUPERFAMILY SSF52833 4 171 3.08E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS01730 bc3aecea3bfc3d423c00c2023d40db02 171 PANTHER PTHR10430:SF19 3 171 1.7E-68 T 23-04-2016 CYCME_RS01730 bc3aecea3bfc3d423c00c2023d40db02 171 Gene3D G3DSA:3.40.30.10 5 171 4.4E-61 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS01730 bc3aecea3bfc3d423c00c2023d40db02 171 Pfam PF08534 Redoxin 28 152 3.5E-30 T 23-04-2016 IPR013740 Redoxin GO:0016491 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 1.3E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 PRINTS PR00980 Alanyl-tRNA synthetase signature 201 212 1.3E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 PRINTS PR00980 Alanyl-tRNA synthetase signature 228 241 1.3E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 1.3E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 PRINTS PR00980 Alanyl-tRNA synthetase signature 77 88 1.3E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 645 688 1.7E-17 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 Pfam PF01411 tRNA synthetases class II (A) 8 547 3.3E-224 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 Gene3D G3DSA:3.30.930.10 4 244 3.0E-118 T 23-04-2016 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 Pfam PF02272 DHHA1 domain 793 858 2.3E-14 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 SUPERFAMILY SSF55186 544 703 5.76E-50 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 PANTHER PTHR11777 1 868 0.0 T 23-04-2016 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 SMART SM00863 645 688 1.4E-20 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 SUPERFAMILY SSF101353 248 456 1.7E-63 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 846 0.0 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 SUPERFAMILY SSF55681 5 247 2.49E-109 T 23-04-2016 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 867 192.676 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 PANTHER PTHR11777:SF9 1 868 0.0 T 23-04-2016 CYCME_RS08335 11e8877f8ac5b052c2b6dfea1140dc11 871 SUPERFAMILY SSF50447 446 544 4.94E-19 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PANTHER PTHR22912:SF48 1 317 1.4E-160 T 23-04-2016 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PANTHER PTHR22912 1 317 1.4E-160 T 23-04-2016 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 Gene3D G3DSA:3.50.50.60 234 312 1.1E-8 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.9E-120 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 Gene3D G3DSA:3.50.50.60 120 233 1.3E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 SUPERFAMILY SSF51905 2 313 3.52E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 Gene3D G3DSA:3.50.50.60 5 119 2.8E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.5E-76 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.0E-42 T 23-04-2016 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.0E-42 T 23-04-2016 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.0E-42 T 23-04-2016 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 3.0E-42 T 23-04-2016 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.0E-42 T 23-04-2016 CYCME_RS06210 faa47c119e43aed02197574b6151f056 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 2.4E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 29 54 2.3E-15 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 2.3E-15 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 2.3E-15 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 Gene3D G3DSA:2.102.10.10 44 149 3.3E-23 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 PANTHER PTHR21266:SF2 19 402 3.9E-62 T 23-04-2016 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 SUPERFAMILY SSF55961 164 402 7.85E-29 T 23-04-2016 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 SUPERFAMILY SSF50022 17 159 3.14E-45 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 Pfam PF00355 Rieske [2Fe-2S] domain 44 128 6.2E-16 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 PANTHER PTHR21266 19 402 3.9E-62 T 23-04-2016 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 Gene3D G3DSA:3.90.380.10 150 337 8.1E-24 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01215 e5c8db863e6bd350f455d92c21be80ed 407 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 403 2.9E-21 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01550 aea1e6858d7c2531a7d1770147eaa371 198 Gene3D G3DSA:3.40.50.150 6 172 1.5E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS01550 aea1e6858d7c2531a7d1770147eaa371 198 PANTHER PTHR10108 22 135 3.8E-12 T 23-04-2016 CYCME_RS01550 aea1e6858d7c2531a7d1770147eaa371 198 Pfam PF03848 Tellurite resistance protein TehB 35 122 1.8E-13 T 23-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain CYCME_RS01550 aea1e6858d7c2531a7d1770147eaa371 198 SUPERFAMILY SSF53335 6 168 2.52E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04295 206bac296bfc136ac327cd8f165f0348 149 Pfam PF01029 NusB family 6 130 1.1E-33 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CYCME_RS04295 206bac296bfc136ac327cd8f165f0348 149 SUPERFAMILY SSF48013 4 132 1.31E-38 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CYCME_RS04295 206bac296bfc136ac327cd8f165f0348 149 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 132 2.9E-41 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CYCME_RS04295 206bac296bfc136ac327cd8f165f0348 149 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 3 134 21.749 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CYCME_RS04295 206bac296bfc136ac327cd8f165f0348 149 Gene3D G3DSA:1.10.940.10 4 135 5.3E-42 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CYCME_RS04295 206bac296bfc136ac327cd8f165f0348 149 PANTHER PTHR11078 1 147 1.0E-37 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 SUPERFAMILY SSF50249 662 742 1.34E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 SUPERFAMILY SSF50249 93 173 8.78E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 Hamap MF_01895 Ribonuclease R [rnr]. 64 743 53.522 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 Pfam PF08206 Ribonuclease B OB domain 113 170 6.1E-18 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 Pfam PF00773 RNB domain 286 613 2.1E-99 T 23-04-2016 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 93 742 4.3E-219 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 ProSitePatterns PS01175 Ribonuclease II family signature. 581 605 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 SMART SM00955 286 614 2.5E-166 T 23-04-2016 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 SMART SM00316 660 743 3.8E-15 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 SMART SM00357 112 171 1.9E-15 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 SUPERFAMILY SSF50249 164 262 4.71E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 PANTHER PTHR23355 29 761 7.8E-233 T 23-04-2016 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 PANTHER PTHR23355:SF9 29 761 7.8E-233 T 23-04-2016 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 Gene3D G3DSA:2.40.50.140 662 754 4.6E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 TIGRFAM TIGR02063 RNase_R: ribonuclease R 47 742 4.3E-257 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 Pfam PF00575 S1 RNA binding domain 660 741 4.7E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 Gene3D G3DSA:2.40.50.140 111 173 5.6E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09180 d6939d6387c2fe3bfcd21c0058baa4bd 761 SUPERFAMILY SSF50249 246 659 9.71E-137 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 Gene3D G3DSA:1.10.510.10 336 520 5.4E-46 T 23-04-2016 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 388 400 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 SUPERFAMILY SSF56112 245 527 1.28E-62 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 Pfam PF13672 Protein phosphatase 2C 36 197 2.1E-12 T 23-04-2016 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 Pfam PF00069 Protein kinase domain 281 514 1.8E-41 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 Gene3D G3DSA:3.60.40.10 7 236 1.4E-47 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 SMART SM00220 269 526 2.8E-27 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 PANTHER PTHR24362 266 525 7.2E-64 T 23-04-2016 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 SUPERFAMILY SSF81606 7 237 5.36E-50 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 SMART SM00331 19 236 2.0E-13 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 SMART SM00332 2 234 3.0E-16 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 Gene3D G3DSA:3.30.200.20 263 335 1.1E-9 T 23-04-2016 CYCME_RS08605 7ace8183dfca7980356116474ba711fc 567 PANTHER PTHR24362:SF160 266 525 7.2E-64 T 23-04-2016 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 Gene3D G3DSA:1.10.760.10 598 673 1.5E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 604 673 5.1E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 52 543 2.7E-186 T 23-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 Pfam PF13360 PQQ-like domain 95 201 8.7E-10 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 Pfam PF13360 PQQ-like domain 456 527 4.2E-10 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 PANTHER PTHR32303 57 355 6.1E-102 T 23-04-2016 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 PANTHER PTHR32303 389 578 6.1E-102 T 23-04-2016 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 PRINTS PR00605 Class IC cytochrome C signature 613 624 1.0E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 PRINTS PR00605 Class IC cytochrome C signature 651 673 1.0E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 Gene3D G3DSA:2.140.10.10 56 572 9.8E-141 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 SUPERFAMILY SSF46626 601 675 2.23E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 PANTHER PTHR32303:SF2 57 355 6.1E-102 T 23-04-2016 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 PANTHER PTHR32303:SF2 389 578 6.1E-102 T 23-04-2016 CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 SMART SM00564 191 228 210.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 SMART SM00564 483 515 8.6E-6 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 SMART SM00564 434 474 0.61 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 SMART SM00564 97 128 72.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 SMART SM00564 145 177 9.2 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 SMART SM00564 327 360 870.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS12445 6a7f69c01df5b86a9e581824786a4811 675 SUPERFAMILY SSF50998 55 574 5.1E-153 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 PANTHER PTHR23342 4 296 4.5E-114 T 23-04-2016 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 PIRSF PIRSF000728 13 296 1.0E-105 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 271 6.6E-76 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 Gene3D G3DSA:3.40.1160.10 27 295 1.4E-100 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 SUPERFAMILY SSF53633 6 296 2.75E-94 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 Hamap MF_00082_B Acetylglutamate kinase [argB]. 26 296 36.716 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 Pfam PF00696 Amino acid kinase family 28 273 3.0E-42 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 7.3E-8 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 PRINTS PR00474 Glutamate 5-kinase family signature 196 223 7.3E-8 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CYCME_RS02595 9df749b48c1021f10acbcc79bf5363da 297 PRINTS PR00474 Glutamate 5-kinase family signature 246 266 7.3E-8 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 PANTHER PTHR11138 1 298 1.1E-111 T 23-04-2016 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 Gene3D G3DSA:3.40.50.170 1 204 4.2E-73 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 Gene3D G3DSA:3.10.25.10 206 302 4.2E-30 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 299 8.2E-96 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 SUPERFAMILY SSF53328 1 206 1.7E-65 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 Pfam PF00551 Formyl transferase 1 178 9.5E-43 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 298 2.7E-26 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 SUPERFAMILY SSF50486 204 301 1.96E-29 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CYCME_RS01585 82c1cd2a18efc60b4919ce2bdb8b313a 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 302 36.363 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CYCME_RS12070 479fcfd1960894dc3dc5a57507c79e5a 423 PANTHER PTHR30629 2 402 1.1E-104 T 23-04-2016 CYCME_RS12070 479fcfd1960894dc3dc5a57507c79e5a 423 Pfam PF00589 Phage integrase family 206 380 9.3E-12 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS12070 479fcfd1960894dc3dc5a57507c79e5a 423 PANTHER PTHR30629:SF4 2 402 1.1E-104 T 23-04-2016 CYCME_RS12070 479fcfd1960894dc3dc5a57507c79e5a 423 SUPERFAMILY SSF56349 100 389 8.83E-42 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS12070 479fcfd1960894dc3dc5a57507c79e5a 423 Gene3D G3DSA:1.10.150.130 100 191 3.1E-8 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CYCME_RS12070 479fcfd1960894dc3dc5a57507c79e5a 423 Pfam PF13356 Domain of unknown function (DUF4102) 3 85 1.2E-15 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 CYCME_RS12070 479fcfd1960894dc3dc5a57507c79e5a 423 Gene3D G3DSA:1.10.443.10 205 386 2.0E-18 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS06460 970090d99f7fca3fa9e18d11490d6046 520 Gene3D G3DSA:2.40.50.100 131 164 2.3E-12 T 23-04-2016 CYCME_RS06460 970090d99f7fca3fa9e18d11490d6046 520 Gene3D G3DSA:2.40.50.100 215 246 2.3E-12 T 23-04-2016 CYCME_RS06460 970090d99f7fca3fa9e18d11490d6046 520 SUPERFAMILY SSF111369 129 326 2.22E-19 T 23-04-2016 CYCME_RS06460 970090d99f7fca3fa9e18d11490d6046 520 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 103 394 5.6E-40 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS06460 970090d99f7fca3fa9e18d11490d6046 520 PANTHER PTHR30097 51 413 1.5E-94 T 23-04-2016 CYCME_RS06460 970090d99f7fca3fa9e18d11490d6046 520 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 320 3.9E-82 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CYCME_RS06460 970090d99f7fca3fa9e18d11490d6046 520 PANTHER PTHR30097:SF3 51 413 1.5E-94 T 23-04-2016 CYCME_RS06460 970090d99f7fca3fa9e18d11490d6046 520 Pfam PF11604 Copper binding periplasmic protein CusF 427 491 1.6E-19 T 23-04-2016 IPR021647 Copper binding periplasmic protein CusF CYCME_RS09260 8eb38882f684b787b72b220021d58ba7 224 Pfam PF02224 Cytidylate kinase 9 222 7.8E-72 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CYCME_RS09260 8eb38882f684b787b72b220021d58ba7 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 8.9E-75 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CYCME_RS09260 8eb38882f684b787b72b220021d58ba7 224 PANTHER PTHR21299 5 224 1.0E-63 T 23-04-2016 CYCME_RS09260 8eb38882f684b787b72b220021d58ba7 224 Gene3D G3DSA:3.40.50.300 7 222 3.9E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09260 8eb38882f684b787b72b220021d58ba7 224 SUPERFAMILY SSF52540 7 222 3.63E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09260 8eb38882f684b787b72b220021d58ba7 224 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 30.827 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CYCME_RS11430 72831f5c21623879a9b04dc6e42fc1e7 189 Pfam PF07238 PilZ domain 96 176 1.9E-10 T 23-04-2016 IPR009875 PilZ domain GO:0035438 CYCME_RS11430 72831f5c21623879a9b04dc6e42fc1e7 189 Gene3D G3DSA:2.40.10.220 9 34 2.1E-6 T 23-04-2016 CYCME_RS11430 72831f5c21623879a9b04dc6e42fc1e7 189 Gene3D G3DSA:2.40.10.220 99 188 2.1E-6 T 23-04-2016 CYCME_RS05185 8a1a520ec898b86655c04a2c61bff4f1 246 PANTHER PTHR30435:SF18 1 246 4.4E-97 T 23-04-2016 CYCME_RS05185 8a1a520ec898b86655c04a2c61bff4f1 246 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 223 2.3E-57 T 23-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 CYCME_RS05185 8a1a520ec898b86655c04a2c61bff4f1 246 SUPERFAMILY SSF117143 77 204 2.62E-17 T 23-04-2016 CYCME_RS05185 8a1a520ec898b86655c04a2c61bff4f1 246 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 241 2.5E-18 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CYCME_RS05185 8a1a520ec898b86655c04a2c61bff4f1 246 PANTHER PTHR30435 1 246 4.4E-97 T 23-04-2016 CYCME_RS05185 8a1a520ec898b86655c04a2c61bff4f1 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 4.7E-38 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CYCME_RS05185 8a1a520ec898b86655c04a2c61bff4f1 246 Pfam PF00460 Flagella basal body rod protein 5 35 3.2E-7 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 SUPERFAMILY SSF48179 211 302 1.36E-25 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 PANTHER PTHR11374:SF25 13 427 2.9E-225 T 23-04-2016 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 PIRSF PIRSF500136 6 435 7.0E-149 T 23-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 PIRSF PIRSF000124 16 431 5.4E-48 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 18 190 6.9E-33 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 327 425 4.1E-18 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 Gene3D G3DSA:3.40.50.720 11 232 4.5E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 18 421 1.1E-115 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 SUPERFAMILY SSF52413 312 428 1.57E-23 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 Gene3D G3DSA:3.40.50.720 242 426 8.7E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 212 300 1.1E-24 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 SMART SM00984 327 428 2.3E-26 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 PANTHER PTHR11374 13 427 2.9E-225 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS06870 79d907e58f4add2588c1d382314e669d 435 SUPERFAMILY SSF51735 18 201 4.86E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 SUPERFAMILY SSF53850 144 638 1.09E-89 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 SUPERFAMILY SSF53850 18 116 1.09E-89 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 PANTHER PTHR30290 99 114 6.6E-64 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 PANTHER PTHR30290 142 185 6.6E-64 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 PANTHER PTHR30290 19 76 6.6E-64 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 PANTHER PTHR30290 313 660 6.6E-64 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 PANTHER PTHR30290 206 291 6.6E-64 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 Gene3D G3DSA:3.90.76.10 31 273 2.2E-27 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 Gene3D G3DSA:3.10.105.10 382 620 6.8E-49 T 23-04-2016 CYCME_RS08050 fd3957a8990d8f8b8855fc18449d133e 695 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 144 564 3.0E-50 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain CYCME_RS02125 9d93d135ab30f63ecc4cfa78e35acb20 213 PANTHER PTHR11237:SF3 2 213 2.8E-89 T 23-04-2016 CYCME_RS02125 9d93d135ab30f63ecc4cfa78e35acb20 213 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 52 213 2.0E-40 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 CYCME_RS02125 9d93d135ab30f63ecc4cfa78e35acb20 213 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 12 213 28.771 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 CYCME_RS02125 9d93d135ab30f63ecc4cfa78e35acb20 213 Gene3D G3DSA:1.20.1260.10 53 181 8.6E-12 T 23-04-2016 IPR012347 Ferritin-related CYCME_RS02125 9d93d135ab30f63ecc4cfa78e35acb20 213 SUPERFAMILY SSF47240 52 181 3.81E-17 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS02125 9d93d135ab30f63ecc4cfa78e35acb20 213 PANTHER PTHR11237 2 213 2.8E-89 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 CYCME_RS01690 02ce5db06c0ace04684d1c652e0497c4 417 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 42 358 1.9E-58 T 23-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CYCME_RS01690 02ce5db06c0ace04684d1c652e0497c4 417 PANTHER PTHR38043 4 380 2.8E-38 T 23-04-2016 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 Pfam PF01676 Metalloenzyme superfamily 1 490 4.3E-76 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 1 502 47.191 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 Gene3D G3DSA:3.40.720.10 306 502 3.5E-82 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 Gene3D G3DSA:3.40.720.10 1 69 3.5E-82 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 PIRSF PIRSF001492 1 504 1.3E-194 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 SUPERFAMILY SSF53649 1 69 1.44E-70 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 SUPERFAMILY SSF53649 302 501 1.44E-70 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 1 501 1.8E-209 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 SUPERFAMILY SSF64158 69 301 4.18E-79 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 PANTHER PTHR31637 1 505 2.1E-256 T 23-04-2016 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 PANTHER PTHR31637:SF0 1 505 2.1E-256 T 23-04-2016 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 75 290 1.4E-76 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS00180 02123e8f7b6511dacbb708cf6bd89f58 505 Gene3D G3DSA:3.40.1450.10 70 301 1.4E-87 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 Pfam PF01472 PUA domain 283 357 1.7E-20 T 23-04-2016 IPR002478 PUA domain GO:0003723 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 264 34.099 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 Gene3D G3DSA:3.40.1160.10 7 265 1.3E-56 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 PANTHER PTHR11063 14 374 3.5E-108 T 23-04-2016 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 SMART SM00359 283 366 1.0E-15 T 23-04-2016 IPR002478 PUA domain GO:0003723 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 Pfam PF00696 Amino acid kinase family 11 239 2.5E-46 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 SUPERFAMILY SSF53633 11 263 4.84E-68 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 PANTHER PTHR11063:SF12 14 374 3.5E-108 T 23-04-2016 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 PIRSF PIRSF000729 7 374 6.7E-126 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 Gene3D G3DSA:2.30.130.10 281 372 3.9E-26 T 23-04-2016 IPR015947 PUA-like domain CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 SUPERFAMILY SSF88697 282 373 2.67E-22 T 23-04-2016 IPR015947 PUA-like domain CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 2.8E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 2.8E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 2.8E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 2.8E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 2.8E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CYCME_RS09925 e040a516b244ff251ffa4cfb7d9c4beb 374 TIGRFAM TIGR01027 proB: glutamate 5-kinase 13 372 1.6E-127 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CYCME_RS02490 0b5f9d39e4806ce3ce74768b2bc494f2 356 PANTHER PTHR30469 1 356 2.0E-97 T 23-04-2016 CYCME_RS02490 0b5f9d39e4806ce3ce74768b2bc494f2 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 350 1.8E-70 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS02490 0b5f9d39e4806ce3ce74768b2bc494f2 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 267 5.4E-31 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CYCME_RS02490 0b5f9d39e4806ce3ce74768b2bc494f2 356 PANTHER PTHR30469:SF11 1 356 2.0E-97 T 23-04-2016 CYCME_RS02490 0b5f9d39e4806ce3ce74768b2bc494f2 356 Gene3D G3DSA:2.40.50.100 161 193 6.2E-12 T 23-04-2016 CYCME_RS02490 0b5f9d39e4806ce3ce74768b2bc494f2 356 Gene3D G3DSA:2.40.50.100 73 100 6.2E-12 T 23-04-2016 CYCME_RS02490 0b5f9d39e4806ce3ce74768b2bc494f2 356 SUPERFAMILY SSF111369 57 270 1.01E-37 T 23-04-2016 CYCME_RS11820 5f2a8278f653f1b99345bd5e457b27a9 255 Pfam PF03929 PepSY-associated TM region 11 246 3.6E-14 T 23-04-2016 IPR005625 PepSY-associated TM protein CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 6.5E-164 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.654 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 PIRSF PIRSF001413 1 392 1.3E-158 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 PANTHER PTHR10314:SF3 6 382 3.0E-180 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 377 5.8E-46 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 Gene3D G3DSA:3.40.50.1100 172 388 3.4E-83 T 23-04-2016 CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 PANTHER PTHR10314 6 382 3.0E-180 T 23-04-2016 CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 SUPERFAMILY SSF53686 2 387 6.55E-135 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS12375 0a481bdac0719a7ee9023c62baa54b75 392 Gene3D G3DSA:3.40.50.1100 98 171 1.0E-15 T 23-04-2016 CYCME_RS10695 33fb5f2d869ee2dae9ba855450650202 145 Pfam PF00011 Hsp20/alpha crystallin family 41 140 4.9E-25 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain CYCME_RS10695 33fb5f2d869ee2dae9ba855450650202 145 SUPERFAMILY SSF49764 28 141 1.15E-38 T 23-04-2016 IPR008978 HSP20-like chaperone CYCME_RS10695 33fb5f2d869ee2dae9ba855450650202 145 Gene3D G3DSA:2.60.40.790 6 141 1.1E-40 T 23-04-2016 IPR008978 HSP20-like chaperone CYCME_RS10695 33fb5f2d869ee2dae9ba855450650202 145 PANTHER PTHR11527:SF118 6 145 9.3E-34 T 23-04-2016 CYCME_RS10695 33fb5f2d869ee2dae9ba855450650202 145 PANTHER PTHR11527 6 145 9.3E-34 T 23-04-2016 IPR031107 Small heat shock protein HSP20 CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 Pfam PF05099 Tellurite resistance protein TerB 35 171 2.0E-21 T 23-04-2016 IPR007791 Co-chaperone DjlA, N-terminal CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 Gene3D G3DSA:1.10.3680.10 19 195 2.9E-32 T 23-04-2016 IPR029024 TerB-like CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 Pfam PF00226 DnaJ domain 193 256 5.7E-14 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 PRINTS PR00625 DnaJ domain signature 236 256 9.2E-14 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 PRINTS PR00625 DnaJ domain signature 194 212 9.2E-14 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 PRINTS PR00625 DnaJ domain signature 212 227 9.2E-14 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 SMART SM00271 191 256 3.6E-20 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 Gene3D G3DSA:1.10.287.110 196 254 7.3E-18 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS02030 0100a74f49d56c7fea9ee1d0aadce0a5 258 SUPERFAMILY SSF46565 130 253 1.46E-29 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 23-04-2016 IPR022272 Lipocalin family conserved site CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 Pfam PF08212 Lipocalin-like domain 35 175 1.4E-41 T 23-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 PANTHER PTHR10612 7 175 7.2E-50 T 23-04-2016 CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 SUPERFAMILY SSF50814 11 175 3.43E-49 T 23-04-2016 IPR011038 Calycin-like CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 PIRSF PIRSF036893 2 175 2.0E-39 T 23-04-2016 IPR022271 Lipocalin, ApoD type CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 PRINTS PR01171 Bacterial lipocalin signature 51 67 1.9E-37 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 PRINTS PR01171 Bacterial lipocalin signature 164 174 1.9E-37 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 PRINTS PR01171 Bacterial lipocalin signature 70 79 1.9E-37 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 PRINTS PR01171 Bacterial lipocalin signature 34 48 1.9E-37 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 PRINTS PR01171 Bacterial lipocalin signature 104 118 1.9E-37 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 PRINTS PR01171 Bacterial lipocalin signature 137 148 1.9E-37 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CYCME_RS09400 64ffe84f272a50b0bb46e08df7008f13 175 Gene3D G3DSA:2.40.128.20 8 175 1.8E-52 T 23-04-2016 IPR012674 Calycin CYCME_RS08885 75a12a5bd2571b93d8fde41e90e8bcd7 180 Gene3D G3DSA:3.10.450.50 6 180 1.6E-58 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS08885 75a12a5bd2571b93d8fde41e90e8bcd7 180 Pfam PF00866 Ring hydroxylating beta subunit 29 165 3.9E-46 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS08885 75a12a5bd2571b93d8fde41e90e8bcd7 180 SUPERFAMILY SSF54427 14 180 1.01E-44 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS08885 75a12a5bd2571b93d8fde41e90e8bcd7 180 PANTHER PTHR41534 12 180 1.3E-22 T 23-04-2016 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 PANTHER PTHR21248:SF5 18 474 4.6E-88 T 23-04-2016 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 SMART SM00155 387 414 3.7E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 SMART SM00155 212 239 0.19 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 Gene3D G3DSA:3.30.870.10 311 450 2.2E-32 T 23-04-2016 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 474 2.1E-91 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 SUPERFAMILY SSF56024 291 460 5.38E-37 T 23-04-2016 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 PANTHER PTHR21248 18 474 4.6E-88 T 23-04-2016 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 Pfam PF13091 PLD-like domain 130 273 9.7E-15 T 23-04-2016 IPR025202 Phospholipase D-like domain CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 Pfam PF13091 PLD-like domain 315 440 2.3E-27 T 23-04-2016 IPR025202 Phospholipase D-like domain CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 Pfam PF13396 Phospholipase_D-nuclease N-terminal 19 59 1.8E-8 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 Gene3D G3DSA:3.30.870.10 106 290 2.7E-37 T 23-04-2016 CYCME_RS07835 6bfbc8010180eb62c665b61a49f61aeb 474 SUPERFAMILY SSF56024 93 303 1.68E-42 T 23-04-2016 CYCME_RS12155 91b13185b1e5fe7a72e9986c2914f38b 314 SUPERFAMILY SSF56112 9 310 1.46E-70 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS12155 91b13185b1e5fe7a72e9986c2914f38b 314 Gene3D G3DSA:3.30.200.20 1 102 9.1E-36 T 23-04-2016 CYCME_RS12155 91b13185b1e5fe7a72e9986c2914f38b 314 Hamap MF_00301 Homoserine kinase [thrB]. 1 314 125.405 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CYCME_RS12155 91b13185b1e5fe7a72e9986c2914f38b 314 PANTHER PTHR21064 16 280 7.9E-35 T 23-04-2016 CYCME_RS12155 91b13185b1e5fe7a72e9986c2914f38b 314 Gene3D G3DSA:3.90.1200.10 106 309 8.5E-60 T 23-04-2016 CYCME_RS12155 91b13185b1e5fe7a72e9986c2914f38b 314 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 301 9.1E-114 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CYCME_RS12155 91b13185b1e5fe7a72e9986c2914f38b 314 Pfam PF01636 Phosphotransferase enzyme family 28 253 3.2E-29 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 SUPERFAMILY SSF46689 229 311 4.35E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 294 314 1.8E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 277 294 1.8E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 231 240 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 104 119 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 SMART SM00382 39 185 1.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 Pfam PF00158 Sigma-54 interaction domain 21 183 9.7E-62 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 Gene3D G3DSA:1.10.8.60 190 249 6.7E-19 T 23-04-2016 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 43 56 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 Pfam PF02954 Bacterial regulatory protein, Fis family 271 311 4.9E-15 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 Gene3D G3DSA:1.10.10.60 264 312 2.6E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 Gene3D G3DSA:3.40.50.300 17 189 2.2E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 SUPERFAMILY SSF52540 19 249 1.72E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11920 2e5f6ea03b7c359e361cba9dbcd42fd2 316 PANTHER PTHR32071 17 311 2.8E-130 T 23-04-2016 CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 SMART SM00091 161 229 2.4 T 23-04-2016 IPR000014 PAS domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 SMART SM00091 31 99 17.0 T 23-04-2016 IPR000014 PAS domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 SMART SM00052 463 709 3.2E-101 T 23-04-2016 IPR001633 EAL domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 SUPERFAMILY SSF55785 148 279 8.38E-11 T 23-04-2016 IPR000014 PAS domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 PANTHER PTHR33121:SF13 405 740 3.0E-76 T 23-04-2016 CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Gene3D G3DSA:3.30.450.20 156 279 1.7E-11 T 23-04-2016 CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 287 3.4E-8 T 23-04-2016 IPR000014 PAS domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Pfam PF13682 Chemoreceptor zinc-binding domain 747 812 2.5E-11 T 23-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Pfam PF13426 PAS domain 43 147 7.9E-4 T 23-04-2016 IPR000014 PAS domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Pfam PF13426 PAS domain 172 280 7.1E-7 T 23-04-2016 IPR000014 PAS domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Pfam PF00990 Diguanylate cyclase, GGDEF domain 292 449 2.7E-49 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 290 451 7.9E-48 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Gene3D G3DSA:3.30.70.270 293 461 1.5E-59 T 23-04-2016 CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 SUPERFAMILY SSF55073 297 454 1.8E-50 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Pfam PF00563 EAL domain 470 703 1.7E-69 T 23-04-2016 IPR001633 EAL domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 PANTHER PTHR33121 405 740 3.0E-76 T 23-04-2016 CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Gene3D G3DSA:3.30.450.20 31 145 5.3E-4 T 23-04-2016 CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 SMART SM00267 281 453 3.7E-64 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 Gene3D G3DSA:3.20.20.450 469 716 3.7E-89 T 23-04-2016 IPR001633 EAL domain CYCME_RS02035 ba39ad0a4cc0566389a7b335c3dab4e7 851 SUPERFAMILY SSF141868 469 718 1.09E-81 T 23-04-2016 IPR001633 EAL domain CYCME_RS02050 0af9ea2a5e0ab5d1ac3719c8c138d239 211 PANTHER PTHR30329:SF5 80 209 2.6E-38 T 23-04-2016 CYCME_RS02050 0af9ea2a5e0ab5d1ac3719c8c138d239 211 SUPERFAMILY SSF103088 85 207 5.1E-30 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS02050 0af9ea2a5e0ab5d1ac3719c8c138d239 211 Pfam PF00691 OmpA family 104 201 7.7E-21 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS02050 0af9ea2a5e0ab5d1ac3719c8c138d239 211 Gene3D G3DSA:3.30.1330.60 83 207 5.8E-33 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS02050 0af9ea2a5e0ab5d1ac3719c8c138d239 211 PANTHER PTHR30329 80 209 2.6E-38 T 23-04-2016 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 Gene3D G3DSA:1.20.140.10 217 370 6.6E-30 T 23-04-2016 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 Gene3D G3DSA:1.10.540.10 1 119 2.6E-20 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 SUPERFAMILY SSF56645 1 226 2.09E-47 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 3.9E-16 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 PANTHER PTHR10909 1 375 2.3E-68 T 23-04-2016 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 215 3.2E-14 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 PANTHER PTHR10909:SF341 1 375 2.3E-68 T 23-04-2016 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 371 1.9E-19 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 Gene3D G3DSA:2.40.110.10 122 216 1.9E-19 T 23-04-2016 CYCME_RS06050 fa658f9c6bf92927193b64ad3df06264 376 SUPERFAMILY SSF47203 232 374 2.09E-30 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 SUPERFAMILY SSF141868 433 681 2.75E-87 T 23-04-2016 IPR001633 EAL domain CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 Pfam PF00563 EAL domain 435 669 1.6E-69 T 23-04-2016 IPR001633 EAL domain CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 SUPERFAMILY SSF55073 257 419 4.16E-46 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 Gene3D G3DSA:3.30.70.270 253 425 3.7E-52 T 23-04-2016 CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 Gene3D G3DSA:3.20.20.450 431 680 5.1E-93 T 23-04-2016 IPR001633 EAL domain CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 SMART SM00267 241 418 1.3E-52 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 Pfam PF00990 Diguanylate cyclase, GGDEF domain 252 413 7.7E-45 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 PANTHER PTHR33121:SF13 378 679 2.5E-78 T 23-04-2016 CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 416 2.9E-43 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 PANTHER PTHR33121 378 679 2.5E-78 T 23-04-2016 CYCME_RS02845 1a92e12fb3aed99ad55c988e7e97d956 686 SMART SM00052 428 674 4.3E-104 T 23-04-2016 IPR001633 EAL domain CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PANTHER PTHR11649 683 750 1.1E-254 T 23-04-2016 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PANTHER PTHR11649 15 163 1.1E-254 T 23-04-2016 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PANTHER PTHR11649 278 627 1.1E-254 T 23-04-2016 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 SUPERFAMILY SSF52540 20 186 8.67E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 42 60 7.7E-8 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 21 41 7.7E-8 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 69 84 7.7E-8 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PANTHER PTHR11649:SF37 683 750 1.1E-254 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PANTHER PTHR11649:SF37 15 163 1.1E-254 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 PANTHER PTHR11649:SF37 278 627 1.1E-254 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 Pfam PF02421 Ferrous iron transport protein B 21 176 8.3E-60 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 Gene3D G3DSA:3.40.50.300 16 187 2.2E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 Pfam PF07664 Ferrous iron transport protein B C terminus 471 523 6.0E-20 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 Pfam PF07670 Nucleoside recognition 528 715 9.1E-32 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 Pfam PF07670 Nucleoside recognition 368 459 2.3E-14 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 25 712 1.0E-184 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CYCME_RS08115 3f86ef7283c15057fe9c15e8302cb203 785 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 175 2.0E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 SUPERFAMILY SSF56645 35 291 1.03E-54 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 589 5.5E-27 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 PANTHER PTHR10909:SF296 5 475 1.5E-200 T 23-04-2016 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 Gene3D G3DSA:1.10.540.10 27 158 5.0E-14 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 1.1E-17 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 PANTHER PTHR10909 5 475 1.5E-200 T 23-04-2016 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 450 1.2E-20 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 Gene3D G3DSA:2.40.110.10 160 267 1.2E-27 T 23-04-2016 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 SUPERFAMILY SSF47203 285 469 4.35E-46 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 Gene3D G3DSA:1.20.140.10 268 458 2.4E-51 T 23-04-2016 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 79 156 6.4E-9 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS09230 bf29434f68ad457c80993d0002d09457 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 1.1E-4 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 Gene3D G3DSA:2.40.30.10 4 33 2.5E-9 T 23-04-2016 CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 Gene3D G3DSA:2.40.30.10 159 210 2.5E-9 T 23-04-2016 CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 Pfam PF00297 Ribosomal protein L3 100 185 1.1E-15 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 37.641 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 204 2.9E-88 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 Gene3D G3DSA:4.10.960.10 78 158 1.4E-33 T 23-04-2016 CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 PANTHER PTHR11229 4 209 5.0E-110 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site CYCME_RS03655 380a6ff150057c7edb8ec966dfae6774 212 SUPERFAMILY SSF50447 2 210 4.59E-79 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 PANTHER PTHR22648 2 456 1.4E-165 T 23-04-2016 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SUPERFAMILY SSF50249 139 207 2.61E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SUPERFAMILY SSF47794 364 424 1.88E-13 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Pfam PF00575 S1 RNA binding domain 139 205 3.3E-8 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Gene3D G3DSA:3.30.300.20 207 285 4.4E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Gene3D G3DSA:3.30.1480.10 3 132 5.6E-42 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SUPERFAMILY SSF54814 288 350 1.18E-15 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Pfam PF14520 Helix-hairpin-helix domain 440 495 7.5E-7 T 23-04-2016 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SUPERFAMILY SSF69705 3 133 1.57E-37 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 373 421 2.7E-14 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 448 497 1.2E-13 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 350 2.8E-124 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Gene3D G3DSA:3.30.300.20 286 355 1.3E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Gene3D G3DSA:2.40.50.140 138 206 2.0E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Pfam PF13184 NusA-like KH domain 238 304 9.9E-27 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Pfam PF08529 NusA N-terminal domain 5 131 3.5E-37 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SUPERFAMILY SSF47794 437 498 3.14E-15 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SMART SM00316 141 206 3.2E-11 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SMART SM00322 238 301 22.0 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SMART SM00322 309 369 0.062 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 3 418 29.745 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 SUPERFAMILY SSF54814 209 286 8.5E-29 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 PANTHER PTHR22648:SF0 2 456 1.4E-165 T 23-04-2016 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Gene3D G3DSA:1.10.150.20 437 499 5.3E-21 T 23-04-2016 CYCME_RS04320 be2fc4a1ac1a0abcf1991b4e27fe50b0 500 Gene3D G3DSA:1.10.150.20 362 427 8.6E-15 T 23-04-2016 CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 SUPERFAMILY SSF54211 5 169 3.19E-32 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 PANTHER PTHR32039 1 503 2.9E-250 T 23-04-2016 CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 PANTHER PTHR32039:SF7 1 503 2.9E-250 T 23-04-2016 IPR004482 Mg chelatase-related protein CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 1.7E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 342 354 1.7E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 318 331 1.7E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 1.7E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 Gene3D G3DSA:3.30.230.10 9 167 1.5E-28 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 SUPERFAMILY SSF52540 190 500 1.51E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 406 497 2.3E-26 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 6.0E-46 T 23-04-2016 CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 497 3.2E-201 T 23-04-2016 IPR004482 Mg chelatase-related protein CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 Gene3D G3DSA:3.40.50.300 190 390 1.9E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 SMART SM00382 211 393 3.9E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS02000 c5948bbfa6eae33fbca5f1ae36927be0 504 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 395 3.4E-100 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 SMART SM00849 518 705 0.0082 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 Gene3D G3DSA:3.60.15.10 510 731 6.8E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 234 411 1.3E-30 T 23-04-2016 IPR004477 ComEC/Rec2-related protein CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 115 734 2.6E-120 T 23-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 PANTHER PTHR30619 1 760 5.2E-182 T 23-04-2016 CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 Pfam PF03772 Competence protein 213 480 5.2E-66 T 23-04-2016 IPR004477 ComEC/Rec2-related protein CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 PANTHER PTHR30619:SF2 1 760 5.2E-182 T 23-04-2016 CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 SUPERFAMILY SSF56281 507 740 2.1E-42 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 Pfam PF00753 Metallo-beta-lactamase superfamily 516 698 4.5E-10 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS08430 d208e45f5b1404ba5348eea99eac31b2 763 Pfam PF13567 Domain of unknown function (DUF4131) 19 173 2.4E-28 T 23-04-2016 IPR025405 Domain of unknown function DUF4131 CYCME_RS05690 7b97cbfe9ec0d91354afcc3bc7e15be6 119 PANTHER PTHR33909 4 114 6.0E-32 T 23-04-2016 CYCME_RS05690 7b97cbfe9ec0d91354afcc3bc7e15be6 119 SMART SM01323 24 106 2.4E-39 T 23-04-2016 IPR003849 Preprotein translocase YajC CYCME_RS05690 7b97cbfe9ec0d91354afcc3bc7e15be6 119 Gene3D G3DSA:2.30.30.100 73 110 2.1E-4 T 23-04-2016 CYCME_RS05690 7b97cbfe9ec0d91354afcc3bc7e15be6 119 PANTHER PTHR33909:SF1 4 114 6.0E-32 T 23-04-2016 CYCME_RS05690 7b97cbfe9ec0d91354afcc3bc7e15be6 119 PRINTS PR01853 Bacterial YajC preprotein translocase signature 26 46 2.3E-14 T 23-04-2016 IPR003849 Preprotein translocase YajC CYCME_RS05690 7b97cbfe9ec0d91354afcc3bc7e15be6 119 PRINTS PR01853 Bacterial YajC preprotein translocase signature 64 82 2.3E-14 T 23-04-2016 IPR003849 Preprotein translocase YajC CYCME_RS05690 7b97cbfe9ec0d91354afcc3bc7e15be6 119 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 29 106 4.5E-29 T 23-04-2016 IPR003849 Preprotein translocase YajC CYCME_RS05690 7b97cbfe9ec0d91354afcc3bc7e15be6 119 Pfam PF02699 Preprotein translocase subunit 29 103 7.8E-28 T 23-04-2016 IPR003849 Preprotein translocase YajC CYCME_RS02805 53cc1108c81fe566a110b2c7d542c98f 257 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CYCME_RS02805 53cc1108c81fe566a110b2c7d542c98f 257 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 257 19.952 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CYCME_RS02805 53cc1108c81fe566a110b2c7d542c98f 257 PANTHER PTHR30589 1 256 1.6E-108 T 23-04-2016 CYCME_RS02805 53cc1108c81fe566a110b2c7d542c98f 257 PANTHER PTHR30589:SF0 1 256 1.6E-108 T 23-04-2016 CYCME_RS02805 53cc1108c81fe566a110b2c7d542c98f 257 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 251 2.4E-80 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CYCME_RS02805 53cc1108c81fe566a110b2c7d542c98f 257 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 255 2.0E-80 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CYCME_RS06710 1ab6f7b2381123447864842cc35d8db7 411 Pfam PF12704 MacB-like periplasmic core domain 20 203 1.6E-11 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CYCME_RS06710 1ab6f7b2381123447864842cc35d8db7 411 Pfam PF02687 FtsX-like permease family 291 407 3.0E-13 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CYCME_RS06710 1ab6f7b2381123447864842cc35d8db7 411 PANTHER PTHR30489:SF2 225 409 2.0E-67 T 23-04-2016 CYCME_RS06710 1ab6f7b2381123447864842cc35d8db7 411 PANTHER PTHR30489:SF2 1 202 2.0E-67 T 23-04-2016 CYCME_RS06710 1ab6f7b2381123447864842cc35d8db7 411 PANTHER PTHR30489 225 409 2.0E-67 T 23-04-2016 CYCME_RS06710 1ab6f7b2381123447864842cc35d8db7 411 PANTHER PTHR30489 1 202 2.0E-67 T 23-04-2016 CYCME_RS05325 4b8be1a07f4a9dd3c82a3345c8193c3b 199 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 44 159 5.5E-33 T 23-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated CYCME_RS05325 4b8be1a07f4a9dd3c82a3345c8193c3b 199 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 6 193 5.9E-58 T 23-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated CYCME_RS05325 4b8be1a07f4a9dd3c82a3345c8193c3b 199 PANTHER PTHR36529 6 195 2.2E-32 T 23-04-2016 CYCME_RS05325 4b8be1a07f4a9dd3c82a3345c8193c3b 199 Gene3D G3DSA:3.90.550.10 7 185 1.2E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS05325 4b8be1a07f4a9dd3c82a3345c8193c3b 199 SUPERFAMILY SSF53448 8 198 6.11E-34 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 Pfam PF14842 FliG N-terminal domain 10 111 4.4E-29 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 SUPERFAMILY SSF48029 120 331 2.35E-64 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PANTHER PTHR30534 1 339 5.6E-103 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 Gene3D G3DSA:1.10.220.30 201 338 6.0E-38 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 Pfam PF14841 FliG middle domain 121 194 5.4E-26 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 SUPERFAMILY SSF48029 10 124 8.63E-23 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PANTHER PTHR30534:SF0 1 339 5.6E-103 T 23-04-2016 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 Pfam PF01706 FliG C-terminal domain 227 330 3.7E-37 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 11 27 2.39E-64 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 120 143 2.39E-64 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 201 226 2.39E-64 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 40 66 2.39E-64 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 2.39E-64 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 2.39E-64 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 2.39E-64 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 337 1.9E-99 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 PIRSF PIRSF003161 5 339 2.0E-113 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 Gene3D G3DSA:1.10.220.30 14 78 3.2E-14 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CYCME_RS09100 c524abbf8b1a4afbb50c9471b5e0f114 339 Gene3D G3DSA:1.10.220.30 110 197 8.7E-30 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CYCME_RS03795 cfb606b875194515b570c286476724a7 324 PANTHER PTHR30126:SF6 1 309 3.9E-176 T 23-04-2016 CYCME_RS03795 cfb606b875194515b570c286476724a7 324 Pfam PF03466 LysR substrate binding domain 89 263 2.7E-36 T 23-04-2016 IPR005119 LysR, substrate-binding CYCME_RS03795 cfb606b875194515b570c286476724a7 324 Gene3D G3DSA:3.40.190.10 90 183 4.8E-19 T 23-04-2016 CYCME_RS03795 cfb606b875194515b570c286476724a7 324 Gene3D G3DSA:1.10.10.10 1 82 2.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS03795 cfb606b875194515b570c286476724a7 324 SUPERFAMILY SSF46785 1 89 7.62E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS03795 cfb606b875194515b570c286476724a7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS03795 cfb606b875194515b570c286476724a7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS03795 cfb606b875194515b570c286476724a7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS03795 cfb606b875194515b570c286476724a7 324 SUPERFAMILY SSF53850 90 317 6.08E-39 T 23-04-2016 CYCME_RS03795 cfb606b875194515b570c286476724a7 324 PANTHER PTHR30126 1 309 3.9E-176 T 23-04-2016 CYCME_RS03795 cfb606b875194515b570c286476724a7 324 Gene3D G3DSA:3.40.190.10 184 260 3.5E-23 T 23-04-2016 CYCME_RS03795 cfb606b875194515b570c286476724a7 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 3.0E-13 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS06965 fe7ff5d4bab63b6c782c25a8ea6d3a25 477 Pfam PF01943 Polysaccharide biosynthesis protein 13 274 3.7E-11 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CYCME_RS02570 4be28904a98fd3b446675f9487a9a32b 78 PANTHER PTHR13528 1 74 7.2E-36 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CYCME_RS02570 4be28904a98fd3b446675f9487a9a32b 78 Pfam PF00830 Ribosomal L28 family 3 62 3.0E-28 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CYCME_RS02570 4be28904a98fd3b446675f9487a9a32b 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.7E-29 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS02570 4be28904a98fd3b446675f9487a9a32b 78 SUPERFAMILY SSF143800 2 77 6.08E-31 T 23-04-2016 CYCME_RS02570 4be28904a98fd3b446675f9487a9a32b 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.787 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS02570 4be28904a98fd3b446675f9487a9a32b 78 Gene3D G3DSA:2.30.170.40 2 78 8.5E-38 T 23-04-2016 CYCME_RS12690 f020aea8e01a82b471c07a937a468fa1 84 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 2 17 1.5E-8 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS12690 f020aea8e01a82b471c07a937a468fa1 84 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 74 84 1.5E-8 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS12690 f020aea8e01a82b471c07a937a468fa1 84 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 2 84 1.8E-35 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS12690 f020aea8e01a82b471c07a937a468fa1 84 PANTHER PTHR30075 2 84 1.3E-46 T 23-04-2016 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.144 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 2.8E-57 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 PANTHER PTHR11349 1 140 3.5E-75 T 23-04-2016 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 SUPERFAMILY SSF54919 1 140 7.33E-60 T 23-04-2016 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 9.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 9.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 9.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 9.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 9.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 Gene3D G3DSA:3.30.70.141 1 140 1.4E-60 T 23-04-2016 CYCME_RS09710 e0c7ff8a49192c9ac64f42813cb5e0ef 143 SMART SM00562 3 140 1.0E-89 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 Gene3D G3DSA:4.10.1080.10 82 132 1.1E-11 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PRINTS PR01021 OMPA domain signature 152 174 2.4E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PRINTS PR01021 OMPA domain signature 183 198 2.4E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PRINTS PR01021 OMPA domain signature 198 214 2.4E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PANTHER PTHR30128 84 253 5.7E-46 T 23-04-2016 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 Pfam PF02412 Thrombospondin type 3 repeat 82 101 9.5E-6 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 Pfam PF02412 Thrombospondin type 3 repeat 111 131 7.4E-4 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 SUPERFAMILY SSF103647 83 131 1.19E-15 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 SUPERFAMILY SSF103088 142 253 3.79E-35 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 215 2.1E-9 T 23-04-2016 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 236 254 2.1E-9 T 23-04-2016 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 216 235 2.1E-9 T 23-04-2016 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 169 195 2.1E-9 T 23-04-2016 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 PANTHER PTHR30128:SF10 84 253 5.7E-46 T 23-04-2016 CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 Pfam PF00691 OmpA family 151 247 4.7E-22 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS11675 3618f2e44d2a510ea83343ac2ba568f7 254 Gene3D G3DSA:3.30.1330.60 147 253 2.6E-37 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS07820 c39cb46ccef299b77af24487c0d888e4 363 SUPERFAMILY SSF47090 296 360 4.19E-14 T 23-04-2016 IPR002477 Peptidoglycan binding-like CYCME_RS07820 c39cb46ccef299b77af24487c0d888e4 363 Gene3D G3DSA:1.10.101.10 302 361 1.6E-12 T 23-04-2016 IPR002477 Peptidoglycan binding-like CYCME_RS07820 c39cb46ccef299b77af24487c0d888e4 363 Pfam PF01471 Putative peptidoglycan binding domain 306 358 1.9E-10 T 23-04-2016 IPR002477 Peptidoglycan binding-like CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.997 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 PANTHER PTHR12532:SF0 1 241 8.8E-111 T 23-04-2016 CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 SUPERFAMILY SSF75625 3 245 2.49E-94 T 23-04-2016 IPR029072 YebC-like CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 8.0E-96 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 Gene3D G3DSA:3.30.1270.10 83 134 9.0E-41 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 Gene3D G3DSA:3.30.1270.10 212 246 9.0E-41 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 Gene3D G3DSA:1.10.10.200 1 79 1.4E-33 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 Gene3D G3DSA:3.30.70.980 135 204 4.8E-24 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 PANTHER PTHR12532 1 241 8.8E-111 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CYCME_RS10580 60f13e51f74d07ad9bf2adb91446ea61 248 Pfam PF01709 Transcriptional regulator 5 237 8.3E-91 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.012 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 Pfam PF01327 Polypeptide deformylase 5 152 1.5E-52 T 23-04-2016 IPR023635 Peptide deformylase CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 PANTHER PTHR10458 1 168 1.3E-89 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 PRINTS PR01576 Peptide deformylase signature 120 149 6.5E-39 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 PRINTS PR01576 Peptide deformylase signature 89 100 6.5E-39 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 PRINTS PR01576 Peptide deformylase signature 33 62 6.5E-39 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 PRINTS PR01576 Peptide deformylase signature 101 119 6.5E-39 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 PANTHER PTHR10458:SF10 1 168 1.3E-89 T 23-04-2016 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 2.2E-60 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 PIRSF PIRSF004749 1 175 1.6E-59 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 SUPERFAMILY SSF56420 4 164 1.26E-63 T 23-04-2016 IPR023635 Peptide deformylase CYCME_RS01590 25f9118cca357db41cea1289a16cecd5 176 Gene3D G3DSA:3.90.45.10 5 171 3.1E-67 T 23-04-2016 IPR023635 Peptide deformylase CYCME_RS00050 ae74aa3a313dba186730222d991bceb9 231 PANTHER PTHR24220:SF404 3 231 2.6E-114 T 23-04-2016 CYCME_RS00050 ae74aa3a313dba186730222d991bceb9 231 Pfam PF00005 ABC transporter 19 160 4.5E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS00050 ae74aa3a313dba186730222d991bceb9 231 Gene3D G3DSA:3.40.50.300 1 223 2.4E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00050 ae74aa3a313dba186730222d991bceb9 231 SUPERFAMILY SSF52540 2 223 8.61E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00050 ae74aa3a313dba186730222d991bceb9 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 7.9E-100 T 23-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CYCME_RS00050 ae74aa3a313dba186730222d991bceb9 231 SMART SM00382 26 210 2.7E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00050 ae74aa3a313dba186730222d991bceb9 231 PANTHER PTHR24220 3 231 2.6E-114 T 23-04-2016 CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 481 500 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 PANTHER PTHR18968 18 444 3.0E-107 T 23-04-2016 CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 PANTHER PTHR18968 466 594 3.0E-107 T 23-04-2016 CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 SUPERFAMILY SSF52518 14 194 3.07E-46 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 468 591 3.4E-26 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 SUPERFAMILY SSF52518 401 602 1.29E-41 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 Gene3D G3DSA:3.40.50.970 10 193 1.6E-53 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 Gene3D G3DSA:3.40.50.1220 207 353 2.3E-23 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 190 5.0E-49 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 SUPERFAMILY SSF52467 174 354 2.29E-23 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 212 347 2.9E-20 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CYCME_RS05120 0914fb96d0dde0f707f8a3d7a54560ca 609 Gene3D G3DSA:3.40.50.970 397 605 2.9E-55 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS01325 ceaaeca61df9987c834d486d27048d42 243 Gene3D G3DSA:3.40.1280.10 1 242 2.3E-72 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYCME_RS01325 ceaaeca61df9987c834d486d27048d42 243 Pfam PF04452 RNA methyltransferase 18 236 5.3E-64 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS01325 ceaaeca61df9987c834d486d27048d42 243 SUPERFAMILY SSF88697 2 70 1.19E-15 T 23-04-2016 IPR015947 PUA-like domain CYCME_RS01325 ceaaeca61df9987c834d486d27048d42 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 7 242 4.0E-58 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS01325 ceaaeca61df9987c834d486d27048d42 243 PIRSF PIRSF015601 2 242 2.0E-55 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS01325 ceaaeca61df9987c834d486d27048d42 243 PANTHER PTHR30027:SF3 1 243 7.4E-70 T 23-04-2016 CYCME_RS01325 ceaaeca61df9987c834d486d27048d42 243 SUPERFAMILY SSF75217 75 242 4.36E-46 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CYCME_RS01325 ceaaeca61df9987c834d486d27048d42 243 PANTHER PTHR30027 1 243 7.4E-70 T 23-04-2016 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 488 1.9E-171 T 23-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 Gene3D G3DSA:3.60.120.10 13 493 7.5E-170 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 PANTHER PTHR11236:SF9 1 491 8.3E-230 T 23-04-2016 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 PANTHER PTHR11236 1 491 8.3E-230 T 23-04-2016 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 PRINTS PR00095 Anthranilate synthase component I signature 437 451 1.3E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 PRINTS PR00095 Anthranilate synthase component I signature 342 355 1.3E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 PRINTS PR00095 Anthranilate synthase component I signature 328 341 1.3E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 PRINTS PR00095 Anthranilate synthase component I signature 422 436 1.3E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 SUPERFAMILY SSF56322 15 488 9.03E-154 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 Pfam PF00425 chorismate binding enzyme 227 480 8.3E-98 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal CYCME_RS02085 d0ea2469c9ea254021e4eb2f75377f1a 500 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 172 4.1E-31 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 SUPERFAMILY SSF53623 118 323 1.68E-50 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 SUPERFAMILY SSF51984 22 116 3.01E-15 T 23-04-2016 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 Gene3D G3DSA:3.40.1190.10 116 325 6.4E-62 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 Pfam PF08245 Mur ligase middle domain 132 306 2.8E-30 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 PANTHER PTHR23135 18 463 4.0E-151 T 23-04-2016 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 Gene3D G3DSA:3.40.50.720 25 114 2.9E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 SUPERFAMILY SSF53244 325 463 1.33E-43 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 27 461 1.6E-128 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 Gene3D G3DSA:3.90.190.20 327 460 9.4E-47 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 398 1.8E-8 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 26 463 33.865 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11130 d97bf3ef55b1750be4860a47635818b7 465 PANTHER PTHR23135:SF2 18 463 4.0E-151 T 23-04-2016 CYCME_RS05040 d1b7d005d42f6de60fd53c34358d823c 260 Pfam PF02649 Type I GTP cyclohydrolase folE2 4 252 9.3E-90 T 23-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CYCME_RS05040 d1b7d005d42f6de60fd53c34358d823c 260 Gene3D G3DSA:3.10.270.10 2 256 2.2E-98 T 23-04-2016 CYCME_RS05040 d1b7d005d42f6de60fd53c34358d823c 260 PANTHER PTHR36445:SF1 1 258 1.1E-70 T 23-04-2016 CYCME_RS05040 d1b7d005d42f6de60fd53c34358d823c 260 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 3 257 35.785 T 23-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CYCME_RS05040 d1b7d005d42f6de60fd53c34358d823c 260 PANTHER PTHR36445 1 258 1.1E-70 T 23-04-2016 CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 Gene3D G3DSA:1.10.10.200 1 78 7.6E-25 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 PANTHER PTHR12532:SF4 1 239 1.1E-126 T 23-04-2016 CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 SUPERFAMILY SSF75625 1 238 5.89E-74 T 23-04-2016 IPR029072 YebC-like CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 Gene3D G3DSA:3.30.1270.10 211 238 6.1E-32 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 Gene3D G3DSA:3.30.1270.10 79 131 6.1E-32 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 PANTHER PTHR12532 1 239 1.1E-126 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 Gene3D G3DSA:3.30.70.980 132 203 6.1E-16 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.385 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CYCME_RS07310 b42331321852498bd5acad25ec52a44c 239 Pfam PF01709 Transcriptional regulator 4 236 1.7E-72 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 SUPERFAMILY SSF55326 8 172 3.01E-50 T 23-04-2016 CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 SUPERFAMILY SSF56042 173 338 5.23E-59 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 344 46.894 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 PANTHER PTHR10520 5 338 3.5E-205 T 23-04-2016 CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 Gene3D G3DSA:3.30.1330.10 23 172 1.6E-60 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 76 165 1.8E-14 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 5.9E-140 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 336 7.3E-37 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS00850 e83387493175833a9fd448e1cad4f3ce 345 Gene3D G3DSA:3.90.650.10 174 339 5.7E-65 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 SUPERFAMILY SSF82866 538 762 6.41E-31 T 23-04-2016 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 Pfam PF03176 MMPL family 548 757 7.5E-10 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 Pfam PF03176 MMPL family 122 376 4.6E-25 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 PANTHER PTHR33406 1 97 2.3E-51 T 23-04-2016 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 PANTHER PTHR33406 114 762 2.3E-51 T 23-04-2016 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 Gene3D G3DSA:1.20.1640.10 178 381 4.0E-33 T 23-04-2016 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 Gene3D G3DSA:1.20.1640.10 562 763 9.7E-33 T 23-04-2016 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 PANTHER PTHR33406:SF2 1 97 2.3E-51 T 23-04-2016 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 PANTHER PTHR33406:SF2 114 762 2.3E-51 T 23-04-2016 CYCME_RS01870 76e21cb8c010bb72516ba84b44057489 765 SUPERFAMILY SSF82866 189 377 1.57E-32 T 23-04-2016 CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 SUPERFAMILY SSF50998 30 319 9.42E-46 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 PANTHER PTHR22847 41 306 4.1E-25 T 23-04-2016 CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 Gene3D G3DSA:2.130.10.10 38 321 2.0E-42 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 173 187 - T 23-04-2016 IPR019775 WD40 repeat, conserved site CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 SMART SM00320 148 186 1.6E-5 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 SMART SM00320 189 227 12.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 SMART SM00320 65 105 8.3 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 SMART SM00320 230 269 15.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 SMART SM00320 108 145 330.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 CYCME_RS11665 f355ab97881839f48885dba644f9ec12 323 Pfam PF00400 WD domain, G-beta repeat 150 186 0.0017 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PRINTS PR01183 Ribonucleotide reductase large chain signature 423 446 7.6E-19 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PRINTS PR01183 Ribonucleotide reductase large chain signature 357 380 7.6E-19 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PRINTS PR01183 Ribonucleotide reductase large chain signature 395 417 7.6E-19 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PRINTS PR01183 Ribonucleotide reductase large chain signature 319 330 7.6E-19 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 538 7.6E-19 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PRINTS PR01183 Ribonucleotide reductase large chain signature 178 197 7.6E-19 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 24 661 5.8E-173 T 23-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PANTHER PTHR11573:SF3 15 467 2.2E-196 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PANTHER PTHR11573:SF3 489 661 2.2E-196 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PANTHER PTHR11573 15 467 2.2E-196 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 PANTHER PTHR11573 489 661 2.2E-196 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 17 92 1.1E-7 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 SUPERFAMILY SSF51998 15 220 6.41E-163 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 SUPERFAMILY SSF51998 285 443 6.41E-163 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 SUPERFAMILY SSF51998 511 687 6.41E-163 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 Pfam PF02867 Ribonucleotide reductase, barrel domain 104 653 3.2E-144 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 Gene3D G3DSA:3.20.70.20 285 443 4.1E-119 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 Gene3D G3DSA:3.20.70.20 9 220 4.1E-119 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 Gene3D G3DSA:3.20.70.20 511 559 4.1E-119 T 23-04-2016 CYCME_RS08270 8cdf047bebd3ed0188db47b5b6ed0df3 717 Gene3D G3DSA:3.20.70.20 612 655 4.1E-119 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 328 334 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00941 Cadmium-transporting ATPase signature 131 147 9.7E-14 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00941 Cadmium-transporting ATPase signature 111 131 9.7E-14 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00941 Cadmium-transporting ATPase signature 192 208 9.7E-14 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00941 Cadmium-transporting ATPase signature 211 225 9.7E-14 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00941 Cadmium-transporting ATPase signature 56 68 9.7E-14 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 559 1.5E-27 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 460 1.5E-27 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 1.5E-27 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 542 1.5E-27 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 481 1.5E-27 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 326 340 1.5E-27 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 78 626 9.6E-147 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 SUPERFAMILY SSF81653 129 226 1.96E-22 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 Gene3D G3DSA:3.40.1110.10 340 451 2.8E-19 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 102 605 1.3E-83 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 Gene3D G3DSA:3.40.50.1000 452 589 1.5E-45 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 Gene3D G3DSA:3.40.50.1000 300 339 1.5E-45 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 SUPERFAMILY SSF81665 66 130 6.41E-14 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 SUPERFAMILY SSF81665 227 320 6.41E-14 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 SUPERFAMILY SSF81665 576 597 6.41E-14 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PANTHER PTHR24093:SF317 28 595 9.4E-194 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 78 625 3.3E-176 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 536 1.6E-45 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 Pfam PF00122 E1-E2 ATPase 98 317 7.5E-59 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 Gene3D G3DSA:2.70.150.10 78 227 1.1E-24 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 PANTHER PTHR24093 28 595 9.4E-194 T 23-04-2016 CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 SUPERFAMILY SSF56784 382 623 1.96E-52 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS00690 5c47b666444164e6aeaa462107132f58 632 SUPERFAMILY SSF56784 324 344 1.96E-52 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 37.764 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 PANTHER PTHR11265 5 311 2.5E-136 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 5 310 5.6E-112 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 PIRSF PIRSF004486 1 311 3.6E-105 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 Gene3D G3DSA:3.40.50.150 7 113 4.1E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 Gene3D G3DSA:3.40.50.150 219 311 4.1E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 Gene3D G3DSA:1.10.150.170 115 218 4.1E-37 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 SUPERFAMILY SSF81799 117 216 5.1E-33 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 PANTHER PTHR11265:SF0 5 311 2.5E-136 T 23-04-2016 CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 Pfam PF01795 MraW methylase family 6 310 4.7E-109 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 SUPERFAMILY SSF53335 216 311 2.36E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS11160 19b16bb30459b7b08d62ac8309ddddb4 311 SUPERFAMILY SSF53335 7 116 2.36E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.971 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 Gene3D G3DSA:1.20.1270.20 142 162 1.5E-40 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 Gene3D G3DSA:1.20.1270.20 1 110 1.5E-40 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 1.7E-161 T 23-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 PIRSF PIRSF000076 1 553 5.7E-226 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 Gene3D G3DSA:3.40.50.2030 383 549 3.6E-71 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 PANTHER PTHR30109:SF0 1 553 5.6E-264 T 23-04-2016 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 SUPERFAMILY SSF56821 1 551 6.41E-186 T 23-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 Gene3D G3DSA:3.40.50.2030 240 382 4.9E-65 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 PANTHER PTHR30109 1 553 5.6E-264 T 23-04-2016 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 Gene3D G3DSA:1.20.1270.20 163 234 1.7E-21 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS07880 8e5b66c010ce385ae71d639ec232a7ce 556 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 550 9.7E-229 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Gene3D G3DSA:3.30.70.270 1045 1210 1.2E-58 T 23-04-2016 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Gene3D G3DSA:1.10.287.130 249 316 1.8E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SUPERFAMILY SSF47226 746 759 2.49E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SUPERFAMILY SSF47226 787 885 2.49E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Gene3D G3DSA:3.20.20.450 1217 1464 3.2E-91 T 23-04-2016 IPR001633 EAL domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1043 1200 5.5E-50 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SMART SM00304 188 240 2.3E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 PANTHER PTHR24423 12 24 2.7E-140 T 23-04-2016 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 PANTHER PTHR24423 575 805 2.7E-140 T 23-04-2016 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 PANTHER PTHR24423 182 486 2.7E-140 T 23-04-2016 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SMART SM00267 1032 1204 4.0E-62 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SUPERFAMILY SSF55073 1048 1206 3.22E-51 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Gene3D G3DSA:3.30.565.10 342 541 9.4E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SMART SM00052 1214 1460 1.0E-98 T 23-04-2016 IPR001633 EAL domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SUPERFAMILY SSF52172 915 1038 1.99E-34 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 6.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 6.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 6.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 6.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SUPERFAMILY SSF47384 241 321 6.47E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Pfam PF00072 Response regulator receiver domain 915 1027 1.8E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Pfam PF00072 Response regulator receiver domain 652 763 9.2E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SMART SM00388 255 320 2.0E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Pfam PF00563 EAL domain 1221 1455 2.0E-68 T 23-04-2016 IPR001633 EAL domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 320 1.4E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SMART SM00448 913 1026 1.2E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SMART SM00448 649 763 2.1E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Gene3D G3DSA:3.40.50.2300 647 767 1.6E-40 T 23-04-2016 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Gene3D G3DSA:1.20.120.160 799 897 4.6E-15 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Pfam PF01627 Hpt domain 807 889 4.1E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SUPERFAMILY SSF141868 1219 1466 3.14E-84 T 23-04-2016 IPR001633 EAL domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SUPERFAMILY SSF52172 647 767 8.97E-37 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 482 7.2E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1041 1202 4.0E-46 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SUPERFAMILY SSF55874 309 484 4.58E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 SMART SM00387 367 483 2.7E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Gene3D G3DSA:3.40.50.2300 907 1035 5.8E-37 T 23-04-2016 CYCME_RS09595 325e3a1bdcb18bc5d1e720add44defcf 1475 Pfam PF00672 HAMP domain 170 236 2.0E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 SUPERFAMILY SSF50249 2 69 7.43E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 1.8E-30 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 23-04-2016 IPR019844 Cold-shock conserved site CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 PIRSF PIRSF002599 1 71 1.3E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 Gene3D G3DSA:2.40.50.140 5 68 1.3E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 SMART SM00357 6 70 2.0E-30 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 PANTHER PTHR11544 1 71 2.7E-38 T 23-04-2016 CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 PRINTS PR00050 Cold shock protein signature 7 22 2.7E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 PRINTS PR00050 Cold shock protein signature 28 37 2.7E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS05480 a8f648335efeaafb88f07aa2bb949358 71 PRINTS PR00050 Cold shock protein signature 43 61 2.7E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS11760 bf10c51f14af96bba5466b588c9b3181 358 PANTHER PTHR30605 1 357 4.3E-143 T 23-04-2016 CYCME_RS11760 bf10c51f14af96bba5466b588c9b3181 358 Gene3D G3DSA:3.30.420.40 1 189 3.1E-67 T 23-04-2016 CYCME_RS11760 bf10c51f14af96bba5466b588c9b3181 358 Pfam PF03702 Uncharacterised protein family (UPF0075) 1 358 2.4E-136 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 CYCME_RS11760 bf10c51f14af96bba5466b588c9b3181 358 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 358 37.434 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 CYCME_RS11760 bf10c51f14af96bba5466b588c9b3181 358 SUPERFAMILY SSF53067 8 27 9.84E-27 T 23-04-2016 CYCME_RS11760 bf10c51f14af96bba5466b588c9b3181 358 SUPERFAMILY SSF53067 57 102 9.84E-27 T 23-04-2016 CYCME_RS11760 bf10c51f14af96bba5466b588c9b3181 358 SUPERFAMILY SSF53067 134 332 9.84E-27 T 23-04-2016 CYCME_RS11760 bf10c51f14af96bba5466b588c9b3181 358 PANTHER PTHR30605:SF0 1 357 4.3E-143 T 23-04-2016 CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Gene3D G3DSA:1.10.10.160 108 182 5.1E-15 T 23-04-2016 IPR013986 DExx box DNA helicase domain CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Gene3D G3DSA:3.40.50.300 281 383 2.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Gene3D G3DSA:3.40.50.300 550 640 2.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Gene3D G3DSA:1.10.486.10 384 524 4.8E-37 T 23-04-2016 CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Gene3D G3DSA:3.40.50.300 3 104 9.9E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Gene3D G3DSA:3.40.50.300 183 280 9.9E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 PANTHER PTHR11070 3 664 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Pfam PF13361 UvrD-like helicase C-terminal domain 272 613 9.9E-71 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 PANTHER PTHR11070:SF19 3 664 0.0 T 23-04-2016 CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 667 37.383 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 267 7.6E-72 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CYCME_RS01995 5d33a67fc2374bed9bba368dc5aa62c6 667 SUPERFAMILY SSF52540 2 636 1.91E-158 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 Gene3D G3DSA:3.40.50.2300 6 118 1.7E-28 T 23-04-2016 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 SUPERFAMILY SSF46689 126 174 2.44E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 141 158 7.7E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 158 178 7.7E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 Gene3D G3DSA:1.10.10.60 123 178 3.1E-28 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 Pfam PF02954 Bacterial regulatory protein, Fis family 135 174 2.7E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 PANTHER PTHR26402 6 119 6.9E-43 T 23-04-2016 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 PANTHER PTHR26402:SF344 6 119 6.9E-43 T 23-04-2016 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 SMART SM00448 6 117 8.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 SUPERFAMILY SSF52172 6 119 3.13E-29 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS04390 c4ff6cfad6814e5af6a2d9c431af2aa6 179 Pfam PF00072 Response regulator receiver domain 9 116 1.5E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS11335 922fcbbfac8a2bdd3ae8891815262fe0 421 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 398 3.3E-21 T 23-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CYCME_RS11335 922fcbbfac8a2bdd3ae8891815262fe0 421 PANTHER PTHR35093:SF2 1 419 6.8E-12 T 23-04-2016 CYCME_RS11335 922fcbbfac8a2bdd3ae8891815262fe0 421 PANTHER PTHR35093 1 419 6.8E-12 T 23-04-2016 CYCME_RS11335 922fcbbfac8a2bdd3ae8891815262fe0 421 Gene3D G3DSA:2.40.160.60 12 420 5.1E-64 T 23-04-2016 CYCME_RS11335 922fcbbfac8a2bdd3ae8891815262fe0 421 SUPERFAMILY SSF56935 12 419 1.21E-43 T 23-04-2016 CYCME_RS05410 a39680cf807720bf328b12cb692af249 332 Gene3D G3DSA:3.30.160.60 301 331 1.9E-16 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 CYCME_RS05410 a39680cf807720bf328b12cb692af249 332 Pfam PF02618 YceG-like family 41 327 3.6E-84 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CYCME_RS05410 a39680cf807720bf328b12cb692af249 332 PANTHER PTHR30518 1 330 7.9E-90 T 23-04-2016 CYCME_RS05410 a39680cf807720bf328b12cb692af249 332 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 7 330 9.6E-87 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CYCME_RS05410 a39680cf807720bf328b12cb692af249 332 PANTHER PTHR30518:SF2 1 330 7.9E-90 T 23-04-2016 CYCME_RS10205 e8f7c7a72a101aebb2ae28f939e2c416 498 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 18 248 2.1E-71 T 23-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CYCME_RS10205 e8f7c7a72a101aebb2ae28f939e2c416 498 Gene3D G3DSA:1.10.620.20 5 494 6.7E-169 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CYCME_RS10205 e8f7c7a72a101aebb2ae28f939e2c416 498 Pfam PF04945 YHS domain 406 447 5.2E-10 T 23-04-2016 IPR007029 YHS domain CYCME_RS10205 e8f7c7a72a101aebb2ae28f939e2c416 498 SUPERFAMILY SSF47240 6 489 1.17E-156 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 Pfam PF01494 FAD binding domain 6 341 3.1E-34 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 PANTHER PTHR13789 2 392 7.4E-120 T 23-04-2016 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 392 6.1E-129 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 SUPERFAMILY SSF51905 4 179 1.38E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 SUPERFAMILY SSF51905 278 392 1.38E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 PANTHER PTHR13789:SF240 2 392 7.4E-120 T 23-04-2016 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 Gene3D G3DSA:3.50.50.60 270 359 1.9E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 Gene3D G3DSA:3.50.50.60 5 184 1.9E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 6.6E-22 T 23-04-2016 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 6.6E-22 T 23-04-2016 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.6E-22 T 23-04-2016 CYCME_RS02355 344d11544c6d63d6356c7aaaa03e76c3 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 6.6E-22 T 23-04-2016 CYCME_RS02370 e8c5caf7433b9e6433902794f7a67416 129 Gene3D G3DSA:2.40.50.100 7 128 3.4E-49 T 23-04-2016 CYCME_RS02370 e8c5caf7433b9e6433902794f7a67416 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYCME_RS02370 e8c5caf7433b9e6433902794f7a67416 129 Pfam PF01597 Glycine cleavage H-protein 8 128 8.0E-46 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CYCME_RS02370 e8c5caf7433b9e6433902794f7a67416 129 SUPERFAMILY SSF51230 4 128 8.11E-45 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS02370 e8c5caf7433b9e6433902794f7a67416 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 2.9E-51 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 CYCME_RS02370 e8c5caf7433b9e6433902794f7a67416 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 30.606 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CYCME_RS02370 e8c5caf7433b9e6433902794f7a67416 129 PANTHER PTHR11715 1 129 8.7E-65 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 Pfam PF00271 Helicase conserved C-terminal domain 473 582 1.9E-14 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 SUPERFAMILY SSF52540 461 629 3.82E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 SUPERFAMILY SSF52540 275 339 3.82E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 Pfam PF12137 RNA polymerase recycling family C-terminal 586 946 1.2E-129 T 23-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 Gene3D G3DSA:3.40.50.300 154 320 1.2E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 PANTHER PTHR10799 396 675 3.2E-173 T 23-04-2016 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 PANTHER PTHR10799 780 821 3.2E-173 T 23-04-2016 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 PANTHER PTHR10799 872 948 3.2E-173 T 23-04-2016 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 PANTHER PTHR10799 160 354 3.2E-173 T 23-04-2016 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 Gene3D G3DSA:3.40.50.300 471 588 1.0E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 4 947 60.357 T 23-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 SMART SM00490 498 582 1.6E-14 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 PANTHER PTHR10799:SF610 396 675 3.2E-173 T 23-04-2016 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 PANTHER PTHR10799:SF610 780 821 3.2E-173 T 23-04-2016 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 PANTHER PTHR10799:SF610 872 948 3.2E-173 T 23-04-2016 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 PANTHER PTHR10799:SF610 160 354 3.2E-173 T 23-04-2016 CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 SUPERFAMILY SSF52540 154 355 5.66E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 SMART SM00487 151 348 2.6E-15 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS04670 3559bac930c8b0a731dc0df151bbcdb8 948 Pfam PF00176 SNF2 family N-terminal domain 169 362 1.1E-15 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 CYCME_RS00015 44d4f5d2eec16ccec1890218f0ee2e03 359 Gene3D G3DSA:3.40.50.300 4 170 2.0E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00015 44d4f5d2eec16ccec1890218f0ee2e03 359 Gene3D G3DSA:3.40.50.300 228 338 2.0E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00015 44d4f5d2eec16ccec1890218f0ee2e03 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 350 9.3E-27 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CYCME_RS00015 44d4f5d2eec16ccec1890218f0ee2e03 359 PANTHER PTHR32182:SF0 2 339 3.9E-35 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CYCME_RS00015 44d4f5d2eec16ccec1890218f0ee2e03 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 4 350 3.3E-83 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CYCME_RS00015 44d4f5d2eec16ccec1890218f0ee2e03 359 SUPERFAMILY SSF52540 3 338 4.02E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00015 44d4f5d2eec16ccec1890218f0ee2e03 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 72.365 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CYCME_RS00015 44d4f5d2eec16ccec1890218f0ee2e03 359 PANTHER PTHR32182 2 339 3.9E-35 T 23-04-2016 CYCME_RS09350 bc7babfb64f36e399ab345f22727bccd 320 SUPERFAMILY SSF51569 16 318 5.44E-50 T 23-04-2016 CYCME_RS09350 bc7babfb64f36e399ab345f22727bccd 320 Gene3D G3DSA:3.20.20.70 16 319 2.9E-51 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09350 bc7babfb64f36e399ab345f22727bccd 320 PIRSF PIRSF001365 13 320 7.3E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS09350 bc7babfb64f36e399ab345f22727bccd 320 Pfam PF00701 Dihydrodipicolinate synthetase family 16 316 2.7E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS09350 bc7babfb64f36e399ab345f22727bccd 320 PANTHER PTHR12128 1 319 1.2E-29 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS09350 bc7babfb64f36e399ab345f22727bccd 320 SMART SM01130 15 318 5.2E-27 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 Gene3D G3DSA:3.30.43.10 3 96 2.2E-22 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 Gene3D G3DSA:1.10.45.10 416 455 2.1E-10 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 SUPERFAMILY SSF56176 6 217 2.15E-66 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 PANTHER PTHR11748:SF35 1 459 2.7E-143 T 23-04-2016 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 Gene3D G3DSA:3.30.465.10 97 217 2.6E-37 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 Pfam PF01565 FAD binding domain 42 180 3.3E-36 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 SUPERFAMILY SSF55103 221 457 6.05E-61 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 PANTHER PTHR11748 1 459 2.7E-143 T 23-04-2016 CYCME_RS09870 0941279e27d619f3ddd431b1ebc96a79 460 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 455 8.0E-62 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CYCME_RS06935 9c3ce9882d922e13c34f6e767ec7c76a 311 PANTHER PTHR10366 4 311 6.9E-156 T 23-04-2016 CYCME_RS06935 9c3ce9882d922e13c34f6e767ec7c76a 311 SUPERFAMILY SSF51735 2 309 1.78E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06935 9c3ce9882d922e13c34f6e767ec7c76a 311 Gene3D G3DSA:3.40.50.720 2 170 1.9E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06935 9c3ce9882d922e13c34f6e767ec7c76a 311 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 303 3.9E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06935 9c3ce9882d922e13c34f6e767ec7c76a 311 PANTHER PTHR10366:SF424 4 311 6.9E-156 T 23-04-2016 CYCME_RS06935 9c3ce9882d922e13c34f6e767ec7c76a 311 Gene3D G3DSA:3.90.25.10 171 310 1.6E-55 T 23-04-2016 CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 Pfam PF00294 pfkB family carbohydrate kinase 9 300 5.1E-46 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 SUPERFAMILY SSF53613 10 308 7.48E-58 T 23-04-2016 IPR029056 Ribokinase-like CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 Gene3D G3DSA:3.40.1190.20 10 312 8.4E-66 T 23-04-2016 IPR029056 Ribokinase-like CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 3 310 6.8E-123 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 PANTHER PTHR10584 3 336 4.7E-132 T 23-04-2016 CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 Gene3D G3DSA:3.40.50.620 338 459 8.3E-33 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 471 1.6E-56 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 2 473 41.706 T 23-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 Pfam PF01467 Cytidylyltransferase-like 342 433 2.9E-14 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 PANTHER PTHR10584:SF159 3 336 4.7E-132 T 23-04-2016 CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 SUPERFAMILY SSF52374 338 468 8.89E-22 T 23-04-2016 CYCME_RS00905 beabc875f61a0458a1df05d0ece0291b 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 340 406 1.4E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 SUPERFAMILY SSF54211 217 382 3.6E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 620 1.7E-22 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 SMART SM00387 27 173 2.0E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 Gene3D G3DSA:3.30.565.10 15 211 1.7E-72 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 SUPERFAMILY SSF56719 388 621 9.15E-76 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 Gene3D G3DSA:3.40.50.670 398 609 3.6E-73 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 Pfam PF01751 Toprim domain 413 521 1.1E-13 T 23-04-2016 IPR006171 Toprim domain CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PANTHER PTHR10169 1 628 0.0 T 23-04-2016 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 SMART SM00433 34 624 4.3E-206 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PANTHER PTHR10169:SF45 1 628 0.0 T 23-04-2016 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 624 3.2E-293 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.6E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 45.528 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 Gene3D G3DSA:3.30.230.10 216 390 5.7E-46 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 562 578 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.9E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 5.3E-96 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 SUPERFAMILY SSF55874 5 215 1.72E-63 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05080 c2ca18885ed5540e5ec13d8192bdfae6 628 Pfam PF00204 DNA gyrase B 244 384 1.2E-39 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 201 370 1.7E-46 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 SMART SM00928 471 516 4.3E-19 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 PANTHER PTHR11780 186 560 1.2E-147 T 23-04-2016 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 PANTHER PTHR11780:SF0 186 560 1.2E-147 T 23-04-2016 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 SUPERFAMILY SSF142019 185 392 6.15E-73 T 23-04-2016 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 SUPERFAMILY SSF142984 394 464 6.41E-14 T 23-04-2016 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 SUPERFAMILY SSF140490 468 560 1.16E-29 T 23-04-2016 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 320 335 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 484 495 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 473 555 5.4E-26 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 Gene3D G3DSA:3.40.30.10 83 157 8.4E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 SUPERFAMILY SSF52833 3 167 1.12E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS08720 2a9563693f0e21b244a41902e44af112 593 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 6 146 7.4E-31 T 23-04-2016 CYCME_RS10230 09f963ee7a3e821d8532e6a14a0c94d0 261 TIGRFAM TIGR03220 catechol_dmpE: 2-oxopent-4-enoate hydratase 6 260 1.8E-130 T 23-04-2016 IPR017632 2-oxopent-4-enoate hydratase CYCME_RS10230 09f963ee7a3e821d8532e6a14a0c94d0 261 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 79 258 1.3E-12 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS10230 09f963ee7a3e821d8532e6a14a0c94d0 261 SUPERFAMILY SSF56529 1 261 2.35E-77 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS10230 09f963ee7a3e821d8532e6a14a0c94d0 261 PANTHER PTHR30143 1 261 1.5E-75 T 23-04-2016 CYCME_RS10230 09f963ee7a3e821d8532e6a14a0c94d0 261 Gene3D G3DSA:3.90.850.10 2 261 4.8E-85 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 Pfam PF07731 Multicopper oxidase 486 606 1.2E-27 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 9 604 1.5E-258 T 23-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 Gene3D G3DSA:2.60.40.420 41 165 1.2E-30 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 Gene3D G3DSA:2.60.40.420 469 606 2.4E-36 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 Pfam PF07732 Multicopper oxidase 62 164 2.3E-36 T 23-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 Gene3D G3DSA:2.60.40.420 171 386 6.4E-51 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 ProSitePatterns PS00079 Multicopper oxidases signature 1. 582 602 - T 23-04-2016 IPR033138 Multicopper oxidases, conserved site CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 PANTHER PTHR11709:SF33 51 209 1.0E-109 T 23-04-2016 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 PANTHER PTHR11709:SF33 457 616 1.0E-109 T 23-04-2016 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 PANTHER PTHR11709:SF33 250 363 1.0E-109 T 23-04-2016 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 Pfam PF00394 Multicopper oxidase 175 349 6.7E-32 T 23-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 ProSitePatterns PS00080 Multicopper oxidases signature 2. 587 598 - T 23-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 SUPERFAMILY SSF49503 51 188 9.9E-38 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 PANTHER PTHR11709 51 209 1.0E-109 T 23-04-2016 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 PANTHER PTHR11709 457 616 1.0E-109 T 23-04-2016 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 PANTHER PTHR11709 250 363 1.0E-109 T 23-04-2016 CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 SUPERFAMILY SSF49503 452 604 1.31E-38 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06555 e3ea96b1ec27e3df10213d63df68b829 616 SUPERFAMILY SSF49503 169 387 3.35E-57 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 10 804 0.0 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Gene3D G3DSA:3.40.50.670 408 554 1.5E-99 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Gene3D G3DSA:3.40.50.670 718 786 1.5E-99 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 175 1.9E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PANTHER PTHR10169 721 804 2.0E-304 T 23-04-2016 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PANTHER PTHR10169 1 557 2.0E-304 T 23-04-2016 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 1.3E-28 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 118 132 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 424 438 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 40 55 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 529 541 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 509 526 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 75 88 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 491 507 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 272 285 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 9.7E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Pfam PF01751 Toprim domain 423 535 7.3E-19 T 23-04-2016 IPR006171 Toprim domain CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 378 398 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 224 246 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 474 483 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 10 20 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 185 200 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 200 213 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 316 332 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 PRINTS PR01159 DNA gyrase subunit B signature 364 378 1.1E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 SUPERFAMILY SSF55874 10 222 7.26E-72 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 7 804 102.633 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 SMART SM00387 36 192 1.9E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 SUPERFAMILY SSF56719 730 796 6.54E-88 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 SUPERFAMILY SSF56719 398 564 6.54E-88 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 SUPERFAMILY SSF54211 225 396 4.36E-60 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Pfam PF00204 DNA gyrase B 225 394 1.5E-60 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Gene3D G3DSA:3.30.230.10 224 396 6.5E-75 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 Gene3D G3DSA:3.30.565.10 10 222 3.4E-89 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS00020 efafdc44c400a86bbecd540a97526385 804 SMART SM00433 40 797 1.3E-272 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CYCME_RS00310 2640558cb5cd010d5fc25dc1a70a27ab 367 SUPERFAMILY SSF56796 9 359 4.06E-113 T 23-04-2016 CYCME_RS00310 2640558cb5cd010d5fc25dc1a70a27ab 367 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 6 361 43.071 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CYCME_RS00310 2640558cb5cd010d5fc25dc1a70a27ab 367 Gene3D G3DSA:3.40.50.1970 8 175 9.9E-65 T 23-04-2016 CYCME_RS00310 2640558cb5cd010d5fc25dc1a70a27ab 367 PANTHER PTHR21090 1 360 2.4E-193 T 23-04-2016 CYCME_RS00310 2640558cb5cd010d5fc25dc1a70a27ab 367 Pfam PF01761 3-dehydroquinate synthase 71 328 1.1E-109 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CYCME_RS00310 2640558cb5cd010d5fc25dc1a70a27ab 367 Gene3D G3DSA:1.20.1090.10 176 359 3.3E-66 T 23-04-2016 CYCME_RS00310 2640558cb5cd010d5fc25dc1a70a27ab 367 PIRSF PIRSF001455 9 364 1.7E-110 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CYCME_RS00310 2640558cb5cd010d5fc25dc1a70a27ab 367 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 17 356 1.9E-119 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CYCME_RS08020 fd5c253b290963c963d3d2e353105113 261 PANTHER PTHR10108 91 177 4.2E-20 T 23-04-2016 CYCME_RS08020 fd5c253b290963c963d3d2e353105113 261 PANTHER PTHR10108:SF836 91 177 4.2E-20 T 23-04-2016 CYCME_RS08020 fd5c253b290963c963d3d2e353105113 261 SUPERFAMILY SSF53335 76 193 5.63E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS08020 fd5c253b290963c963d3d2e353105113 261 Pfam PF08241 Methyltransferase domain 77 131 5.8E-11 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CYCME_RS08020 fd5c253b290963c963d3d2e353105113 261 Gene3D G3DSA:3.40.50.150 80 182 2.7E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Gene3D G3DSA:1.10.287.110 1 100 8.3E-36 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 SUPERFAMILY SSF57938 133 209 4.71E-18 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 SUPERFAMILY SSF49493 257 342 1.12E-21 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 39.858 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Pfam PF01556 DnaJ C terminal domain 120 331 7.9E-44 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 PANTHER PTHR24078:SF231 1 348 9.1E-160 T 23-04-2016 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Gene3D G3DSA:2.10.230.10 140 208 2.4E-19 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.3E-134 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Gene3D G3DSA:2.60.260.20 254 331 5.4E-22 T 23-04-2016 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 SUPERFAMILY SSF46565 1 109 8.77E-36 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 SMART SM00271 4 62 2.0E-29 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 SUPERFAMILY SSF49493 184 265 5.76E-20 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 SUPERFAMILY SSF49493 114 137 5.76E-20 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Gene3D G3DSA:2.60.260.20 107 139 5.3E-22 T 23-04-2016 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Gene3D G3DSA:2.60.260.20 209 252 5.3E-22 T 23-04-2016 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Pfam PF00684 DnaJ central domain 146 205 1.8E-11 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 PANTHER PTHR24078 1 348 9.1E-160 T 23-04-2016 CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 PRINTS PR00625 DnaJ domain signature 62 81 1.2E-30 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 PRINTS PR00625 DnaJ domain signature 42 62 1.2E-30 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-30 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-30 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS04935 8f338fea3883b102457ac8ae6b949e24 376 Pfam PF00226 DnaJ domain 5 67 1.6E-27 T 23-04-2016 IPR001623 DnaJ domain CYCME_RS08670 df663286d3913ee035902d4ece9bac31 100 PANTHER PTHR34702:SF1 1 92 1.5E-19 T 23-04-2016 CYCME_RS08670 df663286d3913ee035902d4ece9bac31 100 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 28 79 1.1E-17 T 23-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CYCME_RS08670 df663286d3913ee035902d4ece9bac31 100 PANTHER PTHR34702 1 92 1.5E-19 T 23-04-2016 CYCME_RS07030 fea642d10125956b2e5510786d62dd90 402 SUPERFAMILY SSF53756 2 391 2.69E-66 T 23-04-2016 CYCME_RS07030 fea642d10125956b2e5510786d62dd90 402 Pfam PF00534 Glycosyl transferases group 1 218 369 1.4E-26 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CYCME_RS07030 fea642d10125956b2e5510786d62dd90 402 PANTHER PTHR12526 159 391 4.8E-47 T 23-04-2016 CYCME_RS07030 fea642d10125956b2e5510786d62dd90 402 PANTHER PTHR12526 1 140 4.8E-47 T 23-04-2016 CYCME_RS07030 fea642d10125956b2e5510786d62dd90 402 Gene3D G3DSA:3.40.50.2000 218 368 2.4E-23 T 23-04-2016 CYCME_RS07030 fea642d10125956b2e5510786d62dd90 402 Pfam PF13439 Glycosyltransferase Family 4 12 204 1.9E-15 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 399 418 1.7E-50 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 139 159 1.7E-50 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 171 185 1.7E-50 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 203 217 1.7E-50 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 237 264 1.7E-50 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 SMART SM00382 138 269 5.8E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 SUPERFAMILY SSF48295 337 440 1.96E-35 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 SUPERFAMILY SSF52540 106 317 6.99E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 Pfam PF11638 DnaA N-terminal domain 3 62 2.0E-18 T 23-04-2016 IPR024633 DnaA N-terminal domain CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 Gene3D G3DSA:1.10.1750.10 340 440 1.7E-39 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 PANTHER PTHR30050:SF2 1 441 1.3E-217 T 23-04-2016 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 439 3.7E-182 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 PANTHER PTHR30050 1 441 1.3E-217 T 23-04-2016 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 Gene3D G3DSA:1.10.8.60 272 339 1.6E-27 T 23-04-2016 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 440 32.829 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 Gene3D G3DSA:3.40.50.300 92 270 2.5E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 SMART SM00760 349 418 6.5E-41 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 Pfam PF00308 Bacterial dnaA protein 106 323 1.3E-93 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 350 418 1.3E-30 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CYCME_RS00005 c6ceae886d90756ef9cbdf37974ad21d 441 ProSitePatterns PS01008 DnaA protein signature. 399 418 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 23-04-2016 IPR020595 MnmG-related, conserved site CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 Pfam PF01134 Glucose inhibited division protein A 8 397 2.7E-171 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 Gene3D G3DSA:3.50.50.60 7 232 4.0E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 7.1E-282 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.943 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 PANTHER PTHR11806:SF0 1 622 0.0 T 23-04-2016 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 23-04-2016 IPR020595 MnmG-related, conserved site CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 PANTHER PTHR11806 1 622 0.0 T 23-04-2016 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 SUPERFAMILY SSF51905 97 261 4.7E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 SUPERFAMILY SSF51905 7 66 4.7E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 Pfam PF13932 GidA associated domain 402 616 1.1E-71 T 23-04-2016 IPR026904 GidA associated domain 3 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 379 7.9E-7 T 23-04-2016 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.9E-7 T 23-04-2016 CYCME_RS12340 13613df9c02a513614f4750012ea1d92 624 SMART SM01228 546 617 7.8E-41 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 SMART SM00926 214 267 1.4E-18 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Pfam PF00384 Molybdopterin oxidoreductase 270 706 1.2E-94 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Pfam PF00037 4Fe-4S binding domain 186 203 2.5E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 215 266 3.2E-17 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 SUPERFAMILY SSF53706 215 810 3.93E-202 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 PANTHER PTHR11615 6 56 1.2E-226 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 PANTHER PTHR11615 212 904 1.2E-226 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 SUPERFAMILY SSF54862 132 204 7.12E-15 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 SUPERFAMILY SSF50692 760 903 1.94E-42 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Gene3D G3DSA:2.40.40.20 785 904 1.5E-40 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Gene3D G3DSA:3.30.70.20 131 194 2.1E-12 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Gene3D G3DSA:3.30.70.20 195 221 4.6E-5 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Gene3D G3DSA:2.20.25.90 222 267 5.8E-23 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 81 5.3E-15 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 PANTHER PTHR11615:SF112 6 56 1.2E-226 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 PANTHER PTHR11615:SF112 212 904 1.2E-226 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Gene3D G3DSA:3.10.20.30 4 61 1.6E-7 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Gene3D G3DSA:3.40.50.740 270 359 1.8E-94 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Gene3D G3DSA:3.40.50.740 543 775 1.8E-94 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Gene3D G3DSA:3.40.228.10 360 542 1.4E-67 T 23-04-2016 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 220 901 1.6E-231 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 PIRSF PIRSF036643 1 904 0.0 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 SUPERFAMILY SSF54292 5 123 2.66E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 219 237 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 652 669 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CYCME_RS05025 58256b8bd9a609483e1d0f39dc6d91dd 904 Pfam PF01568 Molydopterin dinucleotide binding domain 792 895 9.5E-27 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 420 2.6E-26 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 41.157 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 SMART SM01209 103 296 6.2E-132 T 23-04-2016 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 SUPERFAMILY SSF51246 329 422 5.73E-30 T 23-04-2016 IPR011054 Rudiment single hybrid motif CYCME_RS02905 a943232af5604991463c13faef1ea891 428 Gene3D G3DSA:3.40.50.20 2 95 3.1E-37 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS02905 a943232af5604991463c13faef1ea891 428 SUPERFAMILY SSF52440 1 103 9.21E-36 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS02905 a943232af5604991463c13faef1ea891 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 7.0E-78 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 Gene3D G3DSA:3.90.600.10 331 422 1.4E-31 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 1.1E-170 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 23-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 SMART SM01210 330 422 3.7E-47 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 Gene3D G3DSA:3.30.1490.20 121 190 1.2E-31 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.9E-35 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 Gene3D G3DSA:3.30.470.20 192 328 2.6E-58 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 PANTHER PTHR10520 1 427 2.7E-266 T 23-04-2016 CYCME_RS02905 a943232af5604991463c13faef1ea891 428 SUPERFAMILY SSF56059 104 322 1.75E-63 T 23-04-2016 CYCME_RS11650 2b91522b4af4576fd646fd334a68f1f3 188 PANTHER PTHR30037:SF4 5 188 2.5E-100 T 23-04-2016 CYCME_RS11650 2b91522b4af4576fd646fd334a68f1f3 188 Pfam PF03352 Methyladenine glycosylase 11 184 6.6E-77 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CYCME_RS11650 2b91522b4af4576fd646fd334a68f1f3 188 PANTHER PTHR30037 5 188 2.5E-100 T 23-04-2016 CYCME_RS11650 2b91522b4af4576fd646fd334a68f1f3 188 SUPERFAMILY SSF48150 5 186 1.73E-74 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CYCME_RS11650 2b91522b4af4576fd646fd334a68f1f3 188 Gene3D G3DSA:1.10.340.30 5 184 6.6E-79 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 23 561 1.1E-231 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 Pfam PF00920 Dehydratase family 40 558 1.5E-214 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 PANTHER PTHR21000 1 561 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 10 561 44.866 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 128 138 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 PANTHER PTHR21000:SF5 1 561 0.0 T 23-04-2016 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 469 480 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 SUPERFAMILY SSF143975 4 381 1.27E-137 T 23-04-2016 CYCME_RS11620 f065df113be77db2e760ab32e3afd40b 564 SUPERFAMILY SSF52016 384 561 5.89E-59 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 SUPERFAMILY SSF141868 567 800 2.48E-72 T 23-04-2016 IPR001633 EAL domain CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 SUPERFAMILY SSF55073 392 550 1.65E-50 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 Pfam PF00990 Diguanylate cyclase, GGDEF domain 387 543 8.1E-49 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 PANTHER PTHR33121:SF16 556 800 1.8E-59 T 23-04-2016 CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 385 546 1.7E-47 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 Gene3D G3DSA:3.30.70.270 389 553 2.2E-55 T 23-04-2016 CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 Pfam PF00563 EAL domain 567 800 1.2E-65 T 23-04-2016 IPR001633 EAL domain CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 SMART SM00052 560 805 5.6E-81 T 23-04-2016 IPR001633 EAL domain CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 PANTHER PTHR33121 556 800 1.8E-59 T 23-04-2016 CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 Gene3D G3DSA:3.20.20.450 564 801 4.1E-76 T 23-04-2016 IPR001633 EAL domain CYCME_RS01465 3fec4caf82bc7ac6af71250f5d4dcdc7 813 SMART SM00267 376 548 5.3E-62 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 23.95 T 23-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 PANTHER PTHR33284 3 216 1.8E-64 T 23-04-2016 CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 173 1.7E-47 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 Gene3D G3DSA:2.40.240.10 5 97 3.2E-33 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 Pfam PF01386 Ribosomal L25p family 7 94 6.7E-25 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 SUPERFAMILY SSF50715 5 198 1.15E-60 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 191 6.7E-31 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 Gene3D G3DSA:2.170.120.20 100 198 7.0E-33 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 190 32.111 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CYCME_RS03555 a760c3a57ccc3915c805af491c6dc0d3 216 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 12 97 2.0E-26 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CYCME_RS10790 77b20dba61f4d95ce2516bfd692ace3d 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 7 136 2.5E-41 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS10790 77b20dba61f4d95ce2516bfd692ace3d 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 8 136 8.7E-37 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS10790 77b20dba61f4d95ce2516bfd692ace3d 167 SUPERFAMILY SSF55083 7 149 1.07E-50 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS10790 77b20dba61f4d95ce2516bfd692ace3d 167 PANTHER PTHR20941 7 154 1.1E-61 T 23-04-2016 CYCME_RS10790 77b20dba61f4d95ce2516bfd692ace3d 167 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 92 103 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS10790 77b20dba61f4d95ce2516bfd692ace3d 167 Gene3D G3DSA:3.30.70.560 7 157 8.4E-55 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 Gene3D G3DSA:1.10.275.10 7 112 4.1E-43 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 6.8E-68 T 23-04-2016 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 6.8E-68 T 23-04-2016 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 6.8E-68 T 23-04-2016 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 6.8E-68 T 23-04-2016 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 6.8E-68 T 23-04-2016 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 6.8E-68 T 23-04-2016 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 Gene3D G3DSA:1.10.40.30 380 436 2.9E-29 T 23-04-2016 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 Gene3D G3DSA:1.20.200.10 113 379 1.1E-107 T 23-04-2016 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 SUPERFAMILY SSF48557 9 461 8.95E-153 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PANTHER PTHR11444:SF3 6 461 5.5E-234 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 Pfam PF00206 Lyase 12 306 1.4E-80 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PANTHER PTHR11444 6 461 5.5E-234 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 Pfam PF14698 Argininosuccinate lyase C-terminal 369 436 7.0E-23 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 5.6E-31 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 5.6E-31 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 5.6E-31 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 5.6E-31 T 23-04-2016 IPR000362 Fumarate lyase family CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 459 43.568 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS01715 271c869360ee0ebe47f579642c1d31b8 463 TIGRFAM TIGR00838 argH: argininosuccinate lyase 9 460 2.6E-192 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 Hamap MF_00268 Protein RecA [recA]. 5 330 51.478 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 PANTHER PTHR22942 3 336 2.7E-202 T 23-04-2016 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 SUPERFAMILY SSF52540 4 268 2.33E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 Gene3D G3DSA:3.30.250.10 269 327 1.1E-25 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 SMART SM00382 58 229 1.6E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 PANTHER PTHR22942:SF1 3 336 2.7E-202 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 Gene3D G3DSA:3.40.50.300 37 268 3.8E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 SUPERFAMILY SSF54752 269 325 1.57E-19 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 PRINTS PR00142 RecA protein signature 298 315 2.6E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 PRINTS PR00142 RecA protein signature 244 273 2.6E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 PRINTS PR00142 RecA protein signature 211 239 2.6E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 PRINTS PR00142 RecA protein signature 94 123 2.6E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 PRINTS PR00142 RecA protein signature 128 157 2.6E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 PRINTS PR00142 RecA protein signature 166 195 2.6E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 Pfam PF00154 recA bacterial DNA recombination protein 7 269 2.4E-144 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 325 3.7E-169 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CYCME_RS08345 ebe448942d21df00899123b92de4b6cb 342 ProSitePatterns PS00321 recA signature. 214 222 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 PANTHER PTHR33154:SF9 3 97 4.7E-21 T 23-04-2016 CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 PANTHER PTHR33154 3 97 4.7E-21 T 23-04-2016 CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 SUPERFAMILY SSF46785 6 97 4.75E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 Gene3D G3DSA:1.10.10.10 5 97 2.5E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 4.4E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 SMART SM00418 16 97 3.2E-19 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 6.4E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 6.4E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS00175 1af9f245b4850fa499bfbfac25eb4abe 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 6.4E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS05050 816bd2791d4cd23594ad8c979ed92aa4 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CYCME_RS05050 816bd2791d4cd23594ad8c979ed92aa4 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CYCME_RS05050 816bd2791d4cd23594ad8c979ed92aa4 294 Gene3D G3DSA:1.10.600.10 2 290 2.3E-90 T 23-04-2016 IPR008949 Isoprenoid synthase domain CYCME_RS05050 816bd2791d4cd23594ad8c979ed92aa4 294 SUPERFAMILY SSF48576 4 288 8.63E-83 T 23-04-2016 IPR008949 Isoprenoid synthase domain CYCME_RS05050 816bd2791d4cd23594ad8c979ed92aa4 294 PANTHER PTHR12001:SF23 4 279 1.4E-96 T 23-04-2016 CYCME_RS05050 816bd2791d4cd23594ad8c979ed92aa4 294 Pfam PF00348 Polyprenyl synthetase 31 268 1.1E-54 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CYCME_RS05050 816bd2791d4cd23594ad8c979ed92aa4 294 PANTHER PTHR12001 4 279 1.4E-96 T 23-04-2016 IPR017446 Polyprenyl synthetase-related CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 SMART SM01130 1 289 1.1E-136 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 PANTHER PTHR12128:SF34 1 285 4.1E-129 T 23-04-2016 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 285 4.9E-107 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 PIRSF PIRSF001365 1 289 6.0E-89 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 PANTHER PTHR12128 1 285 4.1E-129 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 Gene3D G3DSA:3.20.20.70 1 286 6.5E-113 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 8.2E-102 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.1E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.1E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.1E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.1E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 SUPERFAMILY SSF51569 2 285 1.99E-99 T 23-04-2016 CYCME_RS10750 fe955fe5329576ba696b1fd59a80e412 289 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 64.168 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 Gene3D G3DSA:3.20.20.70 10 327 2.6E-54 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 SUPERFAMILY SSF51569 13 314 1.15E-49 T 23-04-2016 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 PANTHER PTHR12128 34 181 3.8E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 SMART SM01130 12 317 9.5E-24 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 PRINTS PR00146 Dihydrodipicolinate synthase signature 89 107 2.2E-7 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 PRINTS PR00146 Dihydrodipicolinate synthase signature 53 74 2.2E-7 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 PIRSF PIRSF001365 15 324 7.4E-55 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 PANTHER PTHR12128:SF34 34 181 3.8E-33 T 23-04-2016 CYCME_RS06220 ed6435db311c9f9b58a2072b9583b6c6 332 Pfam PF00701 Dihydrodipicolinate synthetase family 32 193 6.0E-22 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 PIRSF PIRSF005303 3 316 8.9E-79 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 5 316 2.4E-92 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 313 27.706 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 Pfam PF00586 AIR synthase related protein, N-terminal domain 30 138 4.9E-23 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 Gene3D G3DSA:3.90.650.10 146 316 3.3E-37 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 SUPERFAMILY SSF56042 145 303 8.37E-32 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 Pfam PF02769 AIR synthase related protein, C-terminal domain 152 301 5.4E-6 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 PANTHER PTHR30270:SF0 1 316 1.2E-101 T 23-04-2016 CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 PANTHER PTHR30270 1 316 1.2E-101 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 Gene3D G3DSA:3.30.1330.10 4 142 1.8E-43 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CYCME_RS04300 cc477ff50b350c4cb60306b89b3b50ea 318 SUPERFAMILY SSF55326 6 138 3.84E-32 T 23-04-2016 CYCME_RS11660 0a29a39f3d298eecee6b29a3806021ee 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 3.0E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11660 0a29a39f3d298eecee6b29a3806021ee 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 3.0E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11660 0a29a39f3d298eecee6b29a3806021ee 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 3.0E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11660 0a29a39f3d298eecee6b29a3806021ee 299 Gene3D G3DSA:3.40.50.1820 2 270 1.4E-63 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS11660 0a29a39f3d298eecee6b29a3806021ee 299 PANTHER PTHR10992 3 269 3.5E-52 T 23-04-2016 CYCME_RS11660 0a29a39f3d298eecee6b29a3806021ee 299 SUPERFAMILY SSF53474 1 269 2.41E-60 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS11660 0a29a39f3d298eecee6b29a3806021ee 299 Pfam PF12697 Alpha/beta hydrolase family 23 261 5.1E-22 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03460 c8540da4efc0d6413a87c9d50590be89 337 Gene3D G3DSA:1.10.530.10 80 135 5.9E-56 T 23-04-2016 CYCME_RS03460 c8540da4efc0d6413a87c9d50590be89 337 Gene3D G3DSA:1.10.530.10 217 331 5.9E-56 T 23-04-2016 CYCME_RS03460 c8540da4efc0d6413a87c9d50590be89 337 Pfam PF13406 Transglycosylase SLT domain 39 327 2.1E-96 T 23-04-2016 IPR031304 Transglycosylase SLT domain 2 CYCME_RS03460 c8540da4efc0d6413a87c9d50590be89 337 PANTHER PTHR30163 40 331 1.2E-120 T 23-04-2016 IPR011757 Lytic transglycosylase MltB CYCME_RS03460 c8540da4efc0d6413a87c9d50590be89 337 SUPERFAMILY SSF53955 29 332 5.79E-80 T 23-04-2016 IPR023346 Lysozyme-like domain CYCME_RS03460 c8540da4efc0d6413a87c9d50590be89 337 PANTHER PTHR30163:SF0 40 331 1.2E-120 T 23-04-2016 CYCME_RS03460 c8540da4efc0d6413a87c9d50590be89 337 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 329 4.3E-111 T 23-04-2016 IPR011757 Lytic transglycosylase MltB CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 SUPERFAMILY SSF50022 11 165 2.88E-41 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 4.0E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 4.0E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 101 121 4.0E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 4.0E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 187 209 4.0E-31 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 Gene3D G3DSA:3.90.380.10 155 415 6.9E-51 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 Gene3D G3DSA:2.102.10.10 43 154 1.3E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 PANTHER PTHR21266 23 220 5.6E-39 T 23-04-2016 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 Pfam PF00355 Rieske [2Fe-2S] domain 42 129 1.2E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 PANTHER PTHR21266:SF30 23 220 5.6E-39 T 23-04-2016 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 190 414 4.3E-12 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01125 a42769c704475f7f19e5ec7a2c4ddc8b 416 SUPERFAMILY SSF55961 180 414 4.24E-41 T 23-04-2016 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 937 22.265 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 921 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 PANTHER PTHR32282 1 943 0.0 T 23-04-2016 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:1.20.1580.10 691 817 5.4E-53 T 23-04-2016 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 ProSitePatterns PS00211 ABC transporters family signature. 827 841 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:3.40.50.300 599 665 3.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:3.40.50.300 818 939 3.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:3.40.50.300 476 593 3.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:3.40.50.300 4 51 3.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 PANTHER PTHR32282:SF2 1 943 0.0 T 23-04-2016 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 SUPERFAMILY SSF52540 615 907 8.59E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:1.20.1580.10 91 129 9.6E-52 T 23-04-2016 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:1.20.1580.10 249 282 9.6E-52 T 23-04-2016 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:1.20.1580.10 405 475 9.6E-52 T 23-04-2016 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 SUPERFAMILY SSF52540 424 567 1.31E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 SUPERFAMILY SSF52540 1 204 1.31E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:3.30.1490.20 200 247 1.5E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:3.30.1490.20 130 153 1.5E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS11900 cda68339c84e1c5e2eac9b6bd78aadb8 946 Gene3D G3DSA:1.10.8.280 284 404 3.6E-37 T 23-04-2016 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 Gene3D G3DSA:1.10.1060.10 130 259 2.3E-52 T 23-04-2016 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 PANTHER PTHR11921 12 260 2.0E-170 T 23-04-2016 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 SUPERFAMILY SSF54292 28 128 6.51E-30 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 SUPERFAMILY SSF46548 130 259 4.71E-41 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 30 133 2.2E-31 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 Gene3D G3DSA:3.10.20.30 24 128 1.0E-40 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 1.1E-82 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 PANTHER PTHR11921:SF27 12 260 2.0E-170 T 23-04-2016 CYCME_RS07435 00714c3b01713fed941b6795fb41cccf 261 Pfam PF13534 4Fe-4S dicluster domain 170 243 3.0E-9 T 23-04-2016 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 Gene3D G3DSA:3.40.1380.20 332 478 6.2E-40 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 SUPERFAMILY SSF52935 328 478 3.66E-36 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 Gene3D G3DSA:3.20.20.60 174 331 8.5E-95 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 Gene3D G3DSA:3.20.20.60 8 78 8.5E-95 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 475 1.2E-28 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PANTHER PTHR11817 8 475 1.2E-247 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 8 478 1.7E-164 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PRINTS PR01050 Pyruvate kinase family signature 274 298 2.5E-53 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PRINTS PR01050 Pyruvate kinase family signature 299 317 2.5E-53 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PRINTS PR01050 Pyruvate kinase family signature 65 81 2.5E-53 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PRINTS PR01050 Pyruvate kinase family signature 192 206 2.5E-53 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PRINTS PR01050 Pyruvate kinase family signature 249 273 2.5E-53 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PRINTS PR01050 Pyruvate kinase family signature 222 248 2.5E-53 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PRINTS PR01050 Pyruvate kinase family signature 318 334 2.5E-53 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 Gene3D G3DSA:2.40.33.10 79 172 8.4E-29 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 Pfam PF00224 Pyruvate kinase, barrel domain 8 343 8.1E-117 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 PANTHER PTHR11817:SF17 8 475 1.2E-247 T 23-04-2016 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 SUPERFAMILY SSF51621 5 81 6.28E-95 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 SUPERFAMILY SSF51621 173 345 6.28E-95 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 SUPERFAMILY SSF50800 76 171 4.19E-25 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain CYCME_RS08985 93866ebd3953eae4a7cca08cfd2518d7 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 220 232 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 PANTHER PTHR32338:SF8 2 343 5.0E-172 T 23-04-2016 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 337 41.858 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 140 3.1E-34 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 SUPERFAMILY SSF51735 2 175 3.9E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 Gene3D G3DSA:3.40.50.720 2 157 3.4E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 SMART SM00859 3 141 6.9E-55 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 23-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 Gene3D G3DSA:3.30.360.10 158 311 1.9E-60 T 23-04-2016 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 160 314 1.4E-19 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 PANTHER PTHR32338 2 343 5.0E-172 T 23-04-2016 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 SUPERFAMILY SSF55347 149 311 3.01E-50 T 23-04-2016 CYCME_RS11780 9218b0e29903f30604e189b223c47126 343 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 343 9.7E-131 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 Gene3D G3DSA:3.40.50.980 197 343 6.4E-30 T 23-04-2016 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 Gene3D G3DSA:3.40.50.980 171 196 6.7E-32 T 23-04-2016 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 Gene3D G3DSA:3.40.50.980 22 131 6.7E-32 T 23-04-2016 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 PANTHER PTHR24095:SF169 1 539 1.7E-269 T 23-04-2016 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 Gene3D G3DSA:2.30.38.10 369 437 8.8E-19 T 23-04-2016 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 Gene3D G3DSA:3.30.300.30 440 538 1.3E-32 T 23-04-2016 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 SUPERFAMILY SSF56801 14 537 2.88E-136 T 23-04-2016 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 526 5.0E-22 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 PANTHER PTHR24095 1 539 1.7E-269 T 23-04-2016 CYCME_RS11685 5599875c26a4fc24a825867ccbe1cfb2 541 Pfam PF00501 AMP-binding enzyme 25 443 4.3E-92 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS02060 dcea0433f0c18eefb26a53c3908e2809 154 Pfam PF05425 Copper resistance protein D 47 147 3.6E-12 T 23-04-2016 IPR008457 Copper resistance protein D GO:0016021 CYCME_RS04525 62062ef8a1cdd7ead22e708bf0dd2b95 144 PANTHER PTHR38766 1 140 6.3E-17 T 23-04-2016 CYCME_RS04525 62062ef8a1cdd7ead22e708bf0dd2b95 144 PANTHER PTHR38766:SF1 1 140 6.3E-17 T 23-04-2016 CYCME_RS04525 62062ef8a1cdd7ead22e708bf0dd2b95 144 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 44 111 4.9E-20 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CYCME_RS04525 62062ef8a1cdd7ead22e708bf0dd2b95 144 Pfam PF04347 Flagellar biosynthesis protein, FliO 56 138 7.6E-17 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 SUPERFAMILY SSF52540 178 559 2.83E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 PANTHER PTHR30258 1 568 1.0E-169 T 23-04-2016 CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 152 1.9E-12 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 SMART SM00382 315 436 2.3E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 Pfam PF00437 Type II/IV secretion system protein 192 454 4.0E-71 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 SUPERFAMILY SSF160246 4 149 4.71E-26 T 23-04-2016 CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 PANTHER PTHR30258:SF2 1 568 1.0E-169 T 23-04-2016 CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 Gene3D G3DSA:3.40.50.300 292 561 7.2E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02700 b14b91532859c78229611c367a0072a7 568 Gene3D G3DSA:3.30.450.90 170 287 1.7E-44 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 133 5.4E-39 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 Gene3D G3DSA:3.40.50.720 401 471 3.2E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 Gene3D G3DSA:3.40.50.720 149 235 3.2E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 PRINTS PR00419 Adrenodoxin reductase family signature 147 169 5.6E-35 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 PRINTS PR00419 Adrenodoxin reductase family signature 212 222 5.6E-35 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 PRINTS PR00419 Adrenodoxin reductase family signature 170 183 5.6E-35 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 5.6E-35 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 5.6E-35 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 Gene3D G3DSA:3.50.50.60 236 400 3.5E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 5 471 3.5E-238 T 23-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 SUPERFAMILY SSF46548 5 156 2.2E-42 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 2.4E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 SUPERFAMILY SSF51971 144 401 7.06E-68 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 Gene3D G3DSA:1.10.1060.10 6 148 4.6E-47 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 PANTHER PTHR11938:SF93 24 472 4.4E-261 T 23-04-2016 CYCME_RS00325 db1a0160050c1f0cef01e557998ba560 472 PANTHER PTHR11938 24 472 4.4E-261 T 23-04-2016 CYCME_RS08750 bd4d2a79dfd543967ce4cc86029f297e 365 Gene3D G3DSA:3.40.1090.10 6 210 1.1E-11 T 23-04-2016 CYCME_RS08750 bd4d2a79dfd543967ce4cc86029f297e 365 PANTHER PTHR14226 12 98 1.4E-44 T 23-04-2016 CYCME_RS08750 bd4d2a79dfd543967ce4cc86029f297e 365 PANTHER PTHR14226 125 261 1.4E-44 T 23-04-2016 CYCME_RS08750 bd4d2a79dfd543967ce4cc86029f297e 365 Pfam PF01734 Patatin-like phospholipase 14 208 7.3E-19 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CYCME_RS08750 bd4d2a79dfd543967ce4cc86029f297e 365 SUPERFAMILY SSF52151 119 331 1.78E-50 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CYCME_RS08750 bd4d2a79dfd543967ce4cc86029f297e 365 SUPERFAMILY SSF52151 10 90 1.78E-50 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CYCME_RS08750 bd4d2a79dfd543967ce4cc86029f297e 365 PANTHER PTHR14226:SF37 12 98 1.4E-44 T 23-04-2016 CYCME_RS08750 bd4d2a79dfd543967ce4cc86029f297e 365 PANTHER PTHR14226:SF37 125 261 1.4E-44 T 23-04-2016 CYCME_RS11005 56c27c2a830bf0ebca5834f0fda88418 308 SUPERFAMILY SSF53448 9 167 3.83E-19 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS11005 56c27c2a830bf0ebca5834f0fda88418 308 Pfam PF00535 Glycosyl transferase family 2 9 115 6.9E-8 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS11005 56c27c2a830bf0ebca5834f0fda88418 308 Gene3D G3DSA:3.90.550.10 8 172 1.2E-11 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS08315 e287e193ae9cf394672082365f63be45 364 SUPERFAMILY SSF56219 99 319 6.81E-31 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS08315 e287e193ae9cf394672082365f63be45 364 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 104 311 6.5E-20 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS08315 e287e193ae9cf394672082365f63be45 364 Gene3D G3DSA:3.60.10.10 102 247 2.8E-4 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PANTHER PTHR11493:SF52 419 834 9.1E-288 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PANTHER PTHR11493:SF52 3 256 9.1E-288 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 768 6.3E-17 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 Gene3D G3DSA:3.30.413.10 632 770 1.2E-34 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 8.5E-17 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.5E-17 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 8.5E-17 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 8.5E-17 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 8.5E-17 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 286 2.9E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 8.6E-10 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 621 1.0E-10 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.4E-8 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 4.4E-8 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.4E-8 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 4.4E-8 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 7 800 0.0 T 23-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 SUPERFAMILY SSF51905 2 192 1.11E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 5.0E-7 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 5.0E-7 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 SUPERFAMILY SSF56014 633 806 2.88E-50 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PANTHER PTHR11493 419 834 9.1E-288 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PANTHER PTHR11493 3 256 9.1E-288 T 23-04-2016 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 SUPERFAMILY SSF51905 150 307 1.3E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 Gene3D G3DSA:3.50.50.60 1 106 8.0E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 PIRSF PIRSF037149 1 835 0.0 T 23-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 SUPERFAMILY SSF55124 502 641 8.5E-29 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CYCME_RS08595 6f5312d398d89895714dae2c844adc50 844 Gene3D G3DSA:3.50.50.60 107 307 2.2E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 202 215 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 SUPERFAMILY SSF51569 4 290 1.19E-70 T 23-04-2016 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 Gene3D G3DSA:3.20.20.70 3 346 3.8E-93 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 Pfam PF00682 HMGL-like 6 273 1.9E-52 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 PANTHER PTHR10277 3 508 1.8E-117 T 23-04-2016 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 SUPERFAMILY SSF110921 389 501 2.09E-14 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 SMART SM00917 368 504 3.5E-11 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 PANTHER PTHR10277:SF9 3 508 1.8E-117 T 23-04-2016 CYCME_RS11305 b897e8b906fc353623802aa5c2ea8de9 508 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 501 2.1E-22 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 Gene3D G3DSA:3.50.50.60 124 321 2.4E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 282 289 1.8E-8 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 1.8E-8 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 243 257 1.8E-8 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 1.8E-8 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PANTHER PTHR22912 2 426 1.2E-67 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 SUPERFAMILY SSF51905 17 168 2.83E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 SUPERFAMILY SSF51905 245 322 2.83E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 1.3E-18 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 1.3E-18 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 1.3E-18 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.3E-18 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 1.3E-18 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 PANTHER PTHR22912:SF180 2 426 1.2E-67 T 23-04-2016 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 Gene3D G3DSA:3.50.50.60 15 123 4.4E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 18 293 2.4E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS04945 49b07f2c35cf1324ccff4c7d9daa724a 429 SUPERFAMILY SSF51905 145 250 5.18E-10 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS02940 0d5629ba2e78f9c4cb26b6d4eb699235 149 Pfam PF00364 Biotin-requiring enzyme 75 148 4.8E-22 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CYCME_RS02940 0d5629ba2e78f9c4cb26b6d4eb699235 149 PANTHER PTHR23151 1 149 1.1E-45 T 23-04-2016 CYCME_RS02940 0d5629ba2e78f9c4cb26b6d4eb699235 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 95 109 3.7E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CYCME_RS02940 0d5629ba2e78f9c4cb26b6d4eb699235 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 123 3.7E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CYCME_RS02940 0d5629ba2e78f9c4cb26b6d4eb699235 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 78 91 3.7E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CYCME_RS02940 0d5629ba2e78f9c4cb26b6d4eb699235 149 Gene3D G3DSA:2.40.50.100 72 149 3.5E-29 T 23-04-2016 CYCME_RS02940 0d5629ba2e78f9c4cb26b6d4eb699235 149 SUPERFAMILY SSF51230 74 149 3.14E-23 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS02940 0d5629ba2e78f9c4cb26b6d4eb699235 149 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 149 7.1E-54 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CYCME_RS08185 8e46fc000e7d52a67d2188401518a36c 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 132 188 2.6E-9 T 23-04-2016 CYCME_RS08185 8e46fc000e7d52a67d2188401518a36c 218 SUPERFAMILY SSF52833 6 88 6.58E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS08185 8e46fc000e7d52a67d2188401518a36c 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 78 6.9E-12 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CYCME_RS08185 8e46fc000e7d52a67d2188401518a36c 218 SUPERFAMILY SSF47616 95 208 3.82E-19 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS08185 8e46fc000e7d52a67d2188401518a36c 218 Gene3D G3DSA:3.40.30.10 4 91 1.9E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS08185 8e46fc000e7d52a67d2188401518a36c 218 Gene3D G3DSA:1.20.1050.10 111 209 2.9E-13 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS08185 8e46fc000e7d52a67d2188401518a36c 218 PANTHER PTHR11260 1 209 1.5E-17 T 23-04-2016 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 Gene3D G3DSA:3.40.50.10490 444 609 4.0E-65 T 23-04-2016 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 Pfam PF13522 Glutamine amidotransferase domain 60 193 1.2E-20 T 23-04-2016 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.145 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 PANTHER PTHR10937 1 609 0.0 T 23-04-2016 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 Gene3D G3DSA:3.40.50.10490 244 443 8.4E-72 T 23-04-2016 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 Pfam PF01380 SIS domain 293 419 3.7E-27 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 Pfam PF01380 SIS domain 462 591 3.5E-23 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 SUPERFAMILY SSF56235 2 234 4.55E-73 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 PANTHER PTHR10937:SF0 1 609 0.0 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 Gene3D G3DSA:3.60.20.10 2 236 1.6E-75 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 3.9E-251 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CYCME_RS12270 0df5f3e12c5bdf4c16f9d1ad6d6767e6 609 SUPERFAMILY SSF53697 246 609 1.48E-107 T 23-04-2016 CYCME_RS10025 570c99da2fe7c1c24add75b680b36a0f 208 Gene3D G3DSA:3.30.1060.10 9 199 2.1E-78 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CYCME_RS10025 570c99da2fe7c1c24add75b680b36a0f 208 PANTHER PTHR10173 1 203 6.8E-107 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CYCME_RS10025 570c99da2fe7c1c24add75b680b36a0f 208 SUPERFAMILY SSF55068 4 206 7.85E-80 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CYCME_RS10025 570c99da2fe7c1c24add75b680b36a0f 208 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 3.9E-66 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CYCME_RS10025 570c99da2fe7c1c24add75b680b36a0f 208 PANTHER PTHR10173:SF36 1 203 6.8E-107 T 23-04-2016 CYCME_RS10025 570c99da2fe7c1c24add75b680b36a0f 208 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 205 38.099 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CYCME_RS10025 570c99da2fe7c1c24add75b680b36a0f 208 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 2.5E-67 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CYCME_RS02705 fbe5cc11cad39adaab6328c70bd615d0 400 PANTHER PTHR30012 2 399 2.2E-108 T 23-04-2016 CYCME_RS02705 fbe5cc11cad39adaab6328c70bd615d0 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 4.3E-8 T 23-04-2016 IPR003004 GspF/PilC family CYCME_RS02705 fbe5cc11cad39adaab6328c70bd615d0 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 4.3E-8 T 23-04-2016 IPR003004 GspF/PilC family CYCME_RS02705 fbe5cc11cad39adaab6328c70bd615d0 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 4.3E-8 T 23-04-2016 IPR003004 GspF/PilC family CYCME_RS02705 fbe5cc11cad39adaab6328c70bd615d0 400 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 1.1E-19 T 23-04-2016 IPR018076 Type II secretion system F domain CYCME_RS02705 fbe5cc11cad39adaab6328c70bd615d0 400 Pfam PF00482 Type II secretion system (T2SS), protein F 268 389 9.0E-24 T 23-04-2016 IPR018076 Type II secretion system F domain CYCME_RS02705 fbe5cc11cad39adaab6328c70bd615d0 400 PANTHER PTHR30012:SF0 2 399 2.2E-108 T 23-04-2016 CYCME_RS04825 04fb2226d6c4a14c28f80816a26898d4 375 Pfam PF10117 McrBC 5-methylcytosine restriction system component 18 309 4.0E-20 T 23-04-2016 IPR019292 5-methylcytosine restriction system component CYCME_RS04825 04fb2226d6c4a14c28f80816a26898d4 375 PIRSF PIRSF003109 8 372 1.8E-112 T 23-04-2016 IPR014407 McrBC 5-methylcytosine restriction system component, bacterial CYCME_RS04825 04fb2226d6c4a14c28f80816a26898d4 375 PANTHER PTHR38733 14 373 4.1E-15 T 23-04-2016 CYCME_RS04825 04fb2226d6c4a14c28f80816a26898d4 375 PANTHER PTHR38733:SF1 14 373 4.1E-15 T 23-04-2016 CYCME_RS05360 7945ae7ee631f774658a545a7e4cb97b 195 SUPERFAMILY SSF52972 4 188 3.92E-50 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CYCME_RS05360 7945ae7ee631f774658a545a7e4cb97b 195 PIRSF PIRSF006305 2 195 3.0E-40 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CYCME_RS05360 7945ae7ee631f774658a545a7e4cb97b 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 187 6.2E-46 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CYCME_RS05360 7945ae7ee631f774658a545a7e4cb97b 195 PANTHER PTHR11746:SF102 127 195 1.6E-23 T 23-04-2016 CYCME_RS05360 7945ae7ee631f774658a545a7e4cb97b 195 Hamap MF_00528 Septum formation protein Maf [maf]. 6 194 26.493 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CYCME_RS05360 7945ae7ee631f774658a545a7e4cb97b 195 Pfam PF02545 Maf-like protein 7 189 6.0E-39 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CYCME_RS05360 7945ae7ee631f774658a545a7e4cb97b 195 PANTHER PTHR11746 127 195 1.6E-23 T 23-04-2016 CYCME_RS05360 7945ae7ee631f774658a545a7e4cb97b 195 Gene3D G3DSA:3.90.950.10 5 193 7.8E-49 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CYCME_RS09890 bafb30abf46e7420c7a240f62d3a1376 187 Gene3D G3DSA:3.40.80.10 14 186 1.5E-63 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CYCME_RS09890 bafb30abf46e7420c7a240f62d3a1376 187 PANTHER PTHR30417:SF4 21 184 8.2E-64 T 23-04-2016 CYCME_RS09890 bafb30abf46e7420c7a240f62d3a1376 187 SMART SM00644 21 172 2.0E-47 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CYCME_RS09890 bafb30abf46e7420c7a240f62d3a1376 187 PANTHER PTHR30417 21 184 8.2E-64 T 23-04-2016 CYCME_RS09890 bafb30abf46e7420c7a240f62d3a1376 187 SUPERFAMILY SSF55846 14 185 8.24E-62 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CYCME_RS09890 bafb30abf46e7420c7a240f62d3a1376 187 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 60 172 5.4E-19 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CYCME_RS05820 adf71f501a8d48d26b95fee85eadc57a 285 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 32 178 3.0E-12 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS05820 adf71f501a8d48d26b95fee85eadc57a 285 SMART SM00382 28 186 7.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS05820 adf71f501a8d48d26b95fee85eadc57a 285 PANTHER PTHR22908 6 236 7.1E-68 T 23-04-2016 CYCME_RS05820 adf71f501a8d48d26b95fee85eadc57a 285 SUPERFAMILY SSF52540 12 273 6.89E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05820 adf71f501a8d48d26b95fee85eadc57a 285 Gene3D G3DSA:3.40.50.300 15 205 9.3E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12380 e8aa4b81ec8fe62b910fe22f760ae17e 135 Pfam PF01152 Bacterial-like globin 13 130 1.3E-35 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 CYCME_RS12380 e8aa4b81ec8fe62b910fe22f760ae17e 135 SUPERFAMILY SSF46458 13 133 5.76E-32 T 23-04-2016 IPR009050 Globin-like CYCME_RS12380 e8aa4b81ec8fe62b910fe22f760ae17e 135 PANTHER PTHR10681 10 120 3.5E-12 T 23-04-2016 CYCME_RS12380 e8aa4b81ec8fe62b910fe22f760ae17e 135 Gene3D G3DSA:1.10.490.10 11 133 1.2E-37 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 1.8E-59 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 Gene3D G3DSA:3.40.50.300 851 852 9.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 Gene3D G3DSA:3.40.50.300 1024 1161 9.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 Gene3D G3DSA:3.40.50.300 1 166 9.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 PANTHER PTHR18937:SF261 1 496 2.0E-286 T 23-04-2016 CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 PANTHER PTHR18937:SF261 515 1160 2.0E-286 T 23-04-2016 CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 PIRSF PIRSF005719 1 1165 1.1E-253 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 SUPERFAMILY SSF52540 956 1160 4.74E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 SUPERFAMILY SSF52540 1 210 4.74E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 21.229 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 SMART SM00968 521 620 0.0015 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 PANTHER PTHR18937 1 496 2.0E-286 T 23-04-2016 CYCME_RS09315 069edf4953f2b47baf7740f846ad69e0 1166 PANTHER PTHR18937 515 1160 2.0E-286 T 23-04-2016 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 SUPERFAMILY SSF55961 172 419 1.73E-40 T 23-04-2016 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 205 383 9.2E-12 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 PANTHER PTHR21266 28 226 7.3E-36 T 23-04-2016 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 63 78 6.3E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 6.3E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 193 215 6.3E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 107 127 6.3E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 84 104 6.3E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 32 57 6.3E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 Gene3D G3DSA:3.90.380.10 163 418 2.5E-45 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 Gene3D G3DSA:2.102.10.10 49 162 1.6E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 PANTHER PTHR21266:SF30 28 226 7.3E-36 T 23-04-2016 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 Pfam PF00355 Rieske [2Fe-2S] domain 48 133 6.0E-17 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07960 7077b561242e67bfac5e5d25b3169673 421 SUPERFAMILY SSF50022 18 170 5.11E-40 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 Gene3D G3DSA:2.40.30.10 190 269 4.7E-29 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.5E-7 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 8.5E-7 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 8.5E-7 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 SUPERFAMILY SSF51905 1 189 6.33E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 SUPERFAMILY SSF51905 336 393 6.33E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 PANTHER PTHR10617:SF103 329 391 1.7E-118 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 PANTHER PTHR10617:SF103 1 290 1.7E-118 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 391 1.3E-129 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 Gene3D G3DSA:1.10.8.260 270 321 5.6E-13 T 23-04-2016 IPR023166 HI0933 insert-like domain CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 PANTHER PTHR10617 329 391 1.7E-118 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 PANTHER PTHR10617 1 290 1.7E-118 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 Pfam PF03486 HI0933-like protein 6 391 9.8E-150 T 23-04-2016 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 Gene3D G3DSA:3.50.50.60 3 187 8.0E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 Gene3D G3DSA:3.50.50.60 338 391 8.0E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07810 abe0b6374cd9cd748e85299745cfcbdb 393 SUPERFAMILY SSF160996 191 337 8.11E-40 T 23-04-2016 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 SUPERFAMILY SSF53720 9 418 4.45E-116 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 Gene3D G3DSA:3.40.605.10 377 418 2.1E-97 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 Gene3D G3DSA:3.40.605.10 6 226 2.1E-97 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 PANTHER PTHR11063 1 419 3.8E-175 T 23-04-2016 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 7 418 41.151 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 Gene3D G3DSA:3.40.309.10 229 376 1.1E-40 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 Pfam PF00171 Aldehyde dehydrogenase family 311 376 1.1E-6 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 Pfam PF00171 Aldehyde dehydrogenase family 14 283 2.6E-12 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 PIRSF PIRSF000151 1 419 6.1E-175 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 15 408 3.3E-148 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 PANTHER PTHR11063:SF8 1 419 3.8E-175 T 23-04-2016 CYCME_RS03925 87e7f17a088286ca1e96d7dde208ca62 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 23-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 SUPERFAMILY SSF46894 143 206 4.76E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 PANTHER PTHR26402:SF151 53 204 8.0E-20 T 23-04-2016 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 SMART SM00421 148 205 4.3E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 Gene3D G3DSA:3.40.50.2300 2 151 9.5E-5 T 23-04-2016 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 6.9E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 6.9E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 6.9E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 Gene3D G3DSA:1.10.10.10 152 207 6.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CYCME_RS01955 c47f11c755e884d497a13106914cd394 208 PANTHER PTHR26402 53 204 8.0E-20 T 23-04-2016 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 278 55.926 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 167 191 - T 23-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PRINTS PR00073 Coprogen oxidase signature 235 262 3.5E-81 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PRINTS PR00073 Coprogen oxidase signature 126 148 3.5E-81 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PRINTS PR00073 Coprogen oxidase signature 263 289 3.5E-81 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PRINTS PR00073 Coprogen oxidase signature 163 192 3.5E-81 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PRINTS PR00073 Coprogen oxidase signature 31 47 3.5E-81 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PRINTS PR00073 Coprogen oxidase signature 49 70 3.5E-81 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PRINTS PR00073 Coprogen oxidase signature 91 115 3.5E-81 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PANTHER PTHR10755 7 304 2.3E-185 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 Pfam PF01218 Coproporphyrinogen III oxidase 8 303 2.6E-132 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 SUPERFAMILY SSF102886 6 303 7.85E-138 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 PIRSF PIRSF000166 2 304 3.5E-131 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS01625 fbda75456c7aa842f8773ba71959ed73 304 Gene3D G3DSA:3.40.1500.10 5 303 1.5E-135 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS12385 2420d0bb293f7a980b16b041178f958a 298 TIGRFAM TIGR03213 23dbph12diox: 2,3-dihydroxybiphenyl 1,2-dioxygenase 5 286 1.2E-110 T 23-04-2016 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase GO:0005506|GO:0042178|GO:0051213|GO:0055114 CYCME_RS12385 2420d0bb293f7a980b16b041178f958a 298 SUPERFAMILY SSF54593 138 270 1.52E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS12385 2420d0bb293f7a980b16b041178f958a 298 SUPERFAMILY SSF54593 2 137 1.88E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS12385 2420d0bb293f7a980b16b041178f958a 298 Gene3D G3DSA:3.10.180.10 3 140 1.7E-33 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS12385 2420d0bb293f7a980b16b041178f958a 298 Gene3D G3DSA:3.10.180.10 141 295 3.4E-49 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS12385 2420d0bb293f7a980b16b041178f958a 298 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 242 263 - T 23-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CYCME_RS12385 2420d0bb293f7a980b16b041178f958a 298 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 146 264 1.0E-13 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 Pfam PF12804 MobA-like NTP transferase domain 6 126 1.0E-23 T 23-04-2016 IPR025877 MobA-like NTP transferase CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 1.6E-178 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 40.704 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 Gene3D G3DSA:3.90.550.10 1 244 3.6E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 PANTHER PTHR22572 4 446 3.1E-193 T 23-04-2016 CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 3.0E-7 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 283 313 2.7E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 394 425 3.9E-4 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 Gene3D G3DSA:2.160.10.10 259 434 7.4E-47 T 23-04-2016 CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 SUPERFAMILY SSF53448 1 247 5.41E-61 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 SUPERFAMILY SSF51161 262 434 4.89E-47 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS12275 25ebbb689e74c1af9a355597f02806b9 452 PANTHER PTHR22572:SF115 4 446 3.1E-193 T 23-04-2016 CYCME_RS01155 2fd8524b23a8699a8cfc9752c4572ba0 141 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 58 123 1.8E-19 T 23-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CYCME_RS01155 2fd8524b23a8699a8cfc9752c4572ba0 141 SUPERFAMILY SSF50249 8 127 4.45E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS01155 2fd8524b23a8699a8cfc9752c4572ba0 141 PANTHER PTHR34075 16 130 5.1E-22 T 23-04-2016 CYCME_RS01155 2fd8524b23a8699a8cfc9752c4572ba0 141 PANTHER PTHR34075:SF2 16 130 5.1E-22 T 23-04-2016 CYCME_RS01155 2fd8524b23a8699a8cfc9752c4572ba0 141 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 23 57 1.6E-7 T 23-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal CYCME_RS04990 da6ce978f9a71c7bc08437404c3a2f98 248 SUPERFAMILY SSF51351 1 246 1.02E-84 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CYCME_RS04990 da6ce978f9a71c7bc08437404c3a2f98 248 Gene3D G3DSA:3.20.20.70 1 247 5.5E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS04990 da6ce978f9a71c7bc08437404c3a2f98 248 Pfam PF00121 Triosephosphate isomerase 5 245 3.5E-86 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CYCME_RS04990 da6ce978f9a71c7bc08437404c3a2f98 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 38.292 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CYCME_RS04990 da6ce978f9a71c7bc08437404c3a2f98 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CYCME_RS04990 da6ce978f9a71c7bc08437404c3a2f98 248 PANTHER PTHR21139 1 245 5.6E-104 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CYCME_RS04990 da6ce978f9a71c7bc08437404c3a2f98 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 238 2.4E-63 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CYCME_RS05895 f89bed4a0621a7b6e79898095b21702f 267 Gene3D G3DSA:3.90.226.10 4 264 2.5E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05895 f89bed4a0621a7b6e79898095b21702f 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 264 4.7E-55 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CYCME_RS05895 f89bed4a0621a7b6e79898095b21702f 267 PANTHER PTHR11941 6 264 4.8E-61 T 23-04-2016 CYCME_RS05895 f89bed4a0621a7b6e79898095b21702f 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 112 132 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CYCME_RS05895 f89bed4a0621a7b6e79898095b21702f 267 SUPERFAMILY SSF52096 5 265 9.81E-67 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 PIRSF PIRSF000124 3 413 1.7E-55 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 287 5.5E-25 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 SMART SM00984 314 414 7.3E-29 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 177 4.7E-33 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 PIRSF PIRSF500136 1 421 1.1E-143 T 23-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 Gene3D G3DSA:3.40.50.720 4 219 9.0E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 Gene3D G3DSA:3.40.50.720 229 415 6.0E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 PANTHER PTHR11374:SF25 3 416 1.0E-225 T 23-04-2016 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 411 6.5E-20 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 SUPERFAMILY SSF48179 198 289 3.06E-25 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 SUPERFAMILY SSF51735 4 188 3.83E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 SUPERFAMILY SSF52413 297 412 8.63E-26 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 PANTHER PTHR11374 3 416 1.0E-225 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS09185 adcc9500df353032ec96456d56cbf730 421 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 407 6.7E-119 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 PANTHER PTHR33121 357 604 1.4E-60 T 23-04-2016 CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 SMART SM00052 356 603 9.1E-77 T 23-04-2016 IPR001633 EAL domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 SUPERFAMILY SSF55073 186 340 6.36E-43 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 SUPERFAMILY SSF141868 362 608 1.57E-75 T 23-04-2016 IPR001633 EAL domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 339 1.7E-40 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 SMART SM00091 55 121 2.4E-6 T 23-04-2016 IPR000014 PAS domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 Pfam PF00989 PAS fold 56 167 6.6E-9 T 23-04-2016 IPR013767 PAS fold GO:0006355 CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 Gene3D G3DSA:3.20.20.450 359 607 4.7E-78 T 23-04-2016 IPR001633 EAL domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 Gene3D G3DSA:3.30.450.20 55 168 3.4E-13 T 23-04-2016 CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 SMART SM00267 170 342 2.1E-44 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 55 175 7.8E-10 T 23-04-2016 IPR000014 PAS domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 Gene3D G3DSA:3.30.70.270 183 340 2.7E-47 T 23-04-2016 CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 337 2.7E-39 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 PANTHER PTHR33121:SF10 357 604 1.4E-60 T 23-04-2016 CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 SUPERFAMILY SSF55785 50 168 4.71E-10 T 23-04-2016 IPR000014 PAS domain CYCME_RS03300 9c3f1594be18ea7056c120f9022638ee 609 Pfam PF00563 EAL domain 362 598 2.0E-63 T 23-04-2016 IPR001633 EAL domain CYCME_RS02500 88de577a9a573a8b4f0ca44396dc4198 384 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 8 380 2.3E-149 T 23-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition CYCME_RS02500 88de577a9a573a8b4f0ca44396dc4198 384 PANTHER PTHR31384 9 315 9.9E-50 T 23-04-2016 CYCME_RS02500 88de577a9a573a8b4f0ca44396dc4198 384 SUPERFAMILY SSF55729 182 353 1.64E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS02500 88de577a9a573a8b4f0ca44396dc4198 384 Gene3D G3DSA:3.40.630.30 181 330 6.5E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS02500 88de577a9a573a8b4f0ca44396dc4198 384 PANTHER PTHR31384:SF26 9 315 9.9E-50 T 23-04-2016 CYCME_RS05160 575d232be823abc28ab19ff7f6c800ce 233 Pfam PF13144 Chaperone for flagella basal body P-ring formation 33 231 9.4E-49 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CYCME_RS05160 575d232be823abc28ab19ff7f6c800ce 233 PANTHER PTHR36307 82 231 3.9E-26 T 23-04-2016 CYCME_RS05160 575d232be823abc28ab19ff7f6c800ce 233 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 96 231 1.1E-36 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CYCME_RS02835 5006e72e467b7ac317623dc01e749cdc 194 SUPERFAMILY SSF88697 7 191 5.47E-43 T 23-04-2016 IPR015947 PUA-like domain CYCME_RS02835 5006e72e467b7ac317623dc01e749cdc 194 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 192 2.2E-20 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CYCME_RS02835 5006e72e467b7ac317623dc01e749cdc 194 SMART SM00464 7 193 4.7E-8 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 SUPERFAMILY SSF81452 5 287 4.29E-80 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 PANTHER PTHR11403:SF0 1 114 1.4E-99 T 23-04-2016 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 PANTHER PTHR11403:SF0 132 287 1.4E-99 T 23-04-2016 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 Pfam PF00510 Cytochrome c oxidase subunit III 146 286 1.7E-49 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 Pfam PF00510 Cytochrome c oxidase subunit III 7 103 7.2E-12 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 PANTHER PTHR11403 1 114 1.4E-99 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 PANTHER PTHR11403 132 287 1.4E-99 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 Gene3D G3DSA:1.10.287.70 3 69 8.3E-16 T 23-04-2016 CYCME_RS03110 9c8dc44c1f371b360f3a76055579fa7a 287 Gene3D G3DSA:1.20.120.80 74 287 2.5E-67 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 CYCME_RS02790 7557523231c07d98df125391cb9aa500 532 Pfam PF01645 Conserved region in glutamate synthase 128 468 3.4E-87 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CYCME_RS02790 7557523231c07d98df125391cb9aa500 532 PIRSF PIRSF500060 7 524 3.1E-216 T 23-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria CYCME_RS02790 7557523231c07d98df125391cb9aa500 532 SUPERFAMILY SSF51395 9 486 1.2E-132 T 23-04-2016 CYCME_RS02790 7557523231c07d98df125391cb9aa500 532 PIRSF PIRSF006429 8 528 2.0E-159 T 23-04-2016 IPR024188 Glutamate synthase large subunit-like protein CYCME_RS02790 7557523231c07d98df125391cb9aa500 532 PANTHER PTHR11938:SF50 153 482 4.6E-87 T 23-04-2016 CYCME_RS02790 7557523231c07d98df125391cb9aa500 532 PANTHER PTHR11938 153 482 4.6E-87 T 23-04-2016 CYCME_RS02790 7557523231c07d98df125391cb9aa500 532 Gene3D G3DSA:3.20.20.70 47 491 1.9E-118 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS05505 5223b70b086bf83582bba3c4e191040f 152 Gene3D G3DSA:3.10.129.10 11 140 2.0E-37 T 23-04-2016 IPR029069 HotDog domain CYCME_RS05505 5223b70b086bf83582bba3c4e191040f 152 Pfam PF01575 MaoC like domain 20 118 2.7E-16 T 23-04-2016 IPR002539 MaoC-like domain CYCME_RS05505 5223b70b086bf83582bba3c4e191040f 152 PANTHER PTHR13078 1 144 3.2E-29 T 23-04-2016 CYCME_RS05505 5223b70b086bf83582bba3c4e191040f 152 SUPERFAMILY SSF54637 13 140 1.94E-33 T 23-04-2016 IPR029069 HotDog domain CYCME_RS07850 5ffde140111131754260cdd3e4fff591 141 Pfam PF11215 Protein of unknown function (DUF3010) 1 136 2.2E-56 T 23-04-2016 IPR021378 Protein of unknown function DUF3010 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 Gene3D G3DSA:3.40.50.300 71 227 6.6E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 PANTHER PTHR18934:SF109 728 856 0.0 T 23-04-2016 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 PANTHER PTHR18934:SF109 70 698 0.0 T 23-04-2016 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 Pfam PF11898 Domain of unknown function (DUF3418) 701 1283 6.6E-176 T 23-04-2016 IPR024590 RNA helicase HrpA, C-terminal CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 SMART SM00382 86 378 1.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 SMART SM00490 298 398 1.1E-16 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 PANTHER PTHR18934 728 856 0.0 T 23-04-2016 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 PANTHER PTHR18934 70 698 0.0 T 23-04-2016 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 Pfam PF00271 Helicase conserved C-terminal domain 279 396 2.9E-12 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 SMART SM00847 458 548 7.8E-34 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 593 687 1.9E-18 T 23-04-2016 IPR011709 Domain of unknown function DUF1605 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 SUPERFAMILY SSF52540 72 556 1.65E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 SUPERFAMILY SSF52540 639 658 1.65E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 12 1282 0.0 T 23-04-2016 IPR010222 RNA helicase HrpA GO:0004004 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 Pfam PF04408 Helicase associated domain (HA2) 460 546 4.5E-22 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 Gene3D G3DSA:3.40.50.300 279 415 1.3E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00445 8288b9b15a7a94cb786f21ee4c18b3ff 1287 SMART SM00487 68 253 2.7E-23 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PANTHER PTHR11946:SF11 5 261 0.0 T 23-04-2016 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PANTHER PTHR11946:SF11 284 934 0.0 T 23-04-2016 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 402 417 1.9E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 1.9E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 527 540 1.9E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.9E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 1.9E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 Gene3D G3DSA:3.40.50.620 404 634 1.3E-135 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 Gene3D G3DSA:3.40.50.620 16 204 1.3E-135 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 839 1.2E-288 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PANTHER PTHR11946 5 261 0.0 T 23-04-2016 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 PANTHER PTHR11946 284 934 0.0 T 23-04-2016 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 SUPERFAMILY SSF50677 203 404 2.51E-57 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 Gene3D G3DSA:3.90.740.10 205 390 9.0E-59 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 SUPERFAMILY SSF47323 652 928 1.35E-67 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 928 21.593 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 Pfam PF08264 Anticodon-binding domain of tRNA 685 841 2.4E-22 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 SUPERFAMILY SSF52374 1 201 1.1E-139 T 23-04-2016 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 SUPERFAMILY SSF52374 404 649 1.1E-139 T 23-04-2016 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 Gene3D G3DSA:1.10.730.10 642 789 1.1E-40 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 2.5E-227 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS09900 4a32ba9d7a9c2b53a7d9d38c54bfec0a 937 Pfam PF06827 Zinc finger found in FPG and IleRS 898 925 1.1E-6 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type CYCME_RS06505 45f3fcff0e5e954ff7cb489534ccbcaf 412 PANTHER PTHR30097:SF4 27 412 5.9E-51 T 23-04-2016 CYCME_RS06505 45f3fcff0e5e954ff7cb489534ccbcaf 412 Gene3D G3DSA:2.40.50.100 186 253 1.3E-12 T 23-04-2016 CYCME_RS06505 45f3fcff0e5e954ff7cb489534ccbcaf 412 PANTHER PTHR30097 27 412 5.9E-51 T 23-04-2016 CYCME_RS06505 45f3fcff0e5e954ff7cb489534ccbcaf 412 SUPERFAMILY SSF111369 186 331 1.44E-13 T 23-04-2016 CYCME_RS06505 45f3fcff0e5e954ff7cb489534ccbcaf 412 Pfam PF13533 Biotin-lipoyl like 186 222 1.4E-5 T 23-04-2016 CYCME_RS06505 45f3fcff0e5e954ff7cb489534ccbcaf 412 Pfam PF13437 HlyD family secretion protein 227 324 1.3E-12 T 23-04-2016 CYCME_RS06820 8e3d3223372deddab3759ee00e10e9ab 191 SUPERFAMILY SSF51182 1 186 1.26E-73 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS06820 8e3d3223372deddab3759ee00e10e9ab 191 PANTHER PTHR21047 8 179 4.2E-71 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CYCME_RS06820 8e3d3223372deddab3759ee00e10e9ab 191 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 177 7.0E-71 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CYCME_RS06820 8e3d3223372deddab3759ee00e10e9ab 191 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 6.6E-73 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CYCME_RS06820 8e3d3223372deddab3759ee00e10e9ab 191 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 4.0E-60 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CYCME_RS06820 8e3d3223372deddab3759ee00e10e9ab 191 Gene3D G3DSA:2.60.120.10 1 185 5.9E-78 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 SMART SM00419 174 222 3.5E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 SUPERFAMILY SSF51206 5 150 9.3E-21 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 Gene3D G3DSA:2.60.120.10 4 157 8.5E-24 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 Pfam PF13545 Crp-like helix-turn-helix domain 156 221 1.3E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 SUPERFAMILY SSF46785 153 221 2.25E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 Pfam PF00027 Cyclic nucleotide-binding domain 28 118 1.2E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 Gene3D G3DSA:1.10.10.10 158 222 2.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 PANTHER PTHR24567 13 220 1.3E-84 T 23-04-2016 CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 ProSitePatterns PS00042 Crp-type HTH domain signature. 182 205 - T 23-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 180 196 4.1E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 196 211 4.1E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 SMART SM00100 9 131 9.7E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS02105 249fb8c3a4acfe51cda97e32b483f838 224 PANTHER PTHR24567:SF27 13 220 1.3E-84 T 23-04-2016 CYCME_RS06415 99ddc35279eba02d17d519d56027995b 216 PANTHER PTHR12714 7 211 1.3E-17 T 23-04-2016 CYCME_RS06415 99ddc35279eba02d17d519d56027995b 216 PANTHER PTHR12714:SF11 7 211 1.3E-17 T 23-04-2016 CYCME_RS06415 99ddc35279eba02d17d519d56027995b 216 Pfam PF04191 Phospholipid methyltransferase 117 193 9.8E-8 T 23-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 CYCME_RS09725 a3c4b734efa82abb05e8d9a8d897bbc1 316 Pfam PF03547 Membrane transport protein 31 164 1.4E-12 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CYCME_RS09725 a3c4b734efa82abb05e8d9a8d897bbc1 316 Pfam PF03547 Membrane transport protein 174 313 5.7E-12 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CYCME_RS09725 a3c4b734efa82abb05e8d9a8d897bbc1 316 PANTHER PTHR36838 4 316 1.4E-32 T 23-04-2016 CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 318 731 8.3E-95 T 23-04-2016 IPR006474 Helicase Cas3, CRISPR-associated, core CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 SUPERFAMILY SSF52540 544 689 1.55E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 SUPERFAMILY SSF52540 411 500 1.55E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 SUPERFAMILY SSF52540 309 366 1.55E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 Pfam PF00270 DEAD/DEAH box helicase 310 502 1.2E-7 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 Gene3D G3DSA:3.40.50.300 305 504 1.4E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 28 245 2.6E-21 T 23-04-2016 IPR006483 CRISPR-associated Cas3-HD domain CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 Gene3D G3DSA:3.40.50.300 564 690 1.5E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10500 9ba763bda8b9dc3e3cdf4ed241e872b8 907 SMART SM00487 297 523 7.7E-7 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 84 531 2.5E-178 T 23-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 Pfam PF00364 Biotin-requiring enzyme 109 179 6.3E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 Pfam PF00364 Biotin-requiring enzyme 6 77 3.8E-19 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 SUPERFAMILY SSF51230 3 96 4.58E-20 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 SUPERFAMILY SSF51230 107 198 2.22E-20 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 PANTHER PTHR23151:SF68 24 531 2.4E-217 T 23-04-2016 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 Pfam PF02817 e3 binding domain 232 267 8.4E-15 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 SUPERFAMILY SSF52777 290 531 1.96E-80 T 23-04-2016 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 SUPERFAMILY SSF47005 228 273 5.75E-10 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 Gene3D G3DSA:3.30.559.10 292 531 4.2E-81 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 130 159 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 Gene3D G3DSA:2.40.50.100 107 180 1.9E-21 T 23-04-2016 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 Gene3D G3DSA:2.40.50.100 6 79 2.1E-20 T 23-04-2016 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 302 530 4.0E-77 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 PANTHER PTHR23151 24 531 2.4E-217 T 23-04-2016 CYCME_RS02610 d3cb033b81d85c89460fa39ee98939bb 531 Gene3D G3DSA:4.10.320.10 224 273 3.2E-17 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 Gene3D G3DSA:2.40.30.10 242 344 3.5E-15 T 23-04-2016 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 PANTHER PTHR23115 21 52 1.1E-64 T 23-04-2016 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 PANTHER PTHR23115 74 327 1.1E-64 T 23-04-2016 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 32 216 1.6E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 26 436 3.4E-187 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 17 479 49.474 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 SUPERFAMILY SSF50447 242 332 1.04E-18 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 Pfam PF00009 Elongation factor Tu GTP binding domain 24 229 2.8E-44 T 23-04-2016 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 81 96 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 Gene3D G3DSA:3.40.50.300 13 232 2.2E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 Gene3D G3DSA:2.40.30.10 345 437 2.0E-7 T 23-04-2016 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 SUPERFAMILY SSF50465 335 437 3.07E-31 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 SUPERFAMILY SSF52540 17 233 1.43E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 PRINTS PR00315 GTP-binding elongation factor signature 161 170 7.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 PRINTS PR00315 GTP-binding elongation factor signature 88 96 7.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 PRINTS PR00315 GTP-binding elongation factor signature 108 118 7.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 PRINTS PR00315 GTP-binding elongation factor signature 124 135 7.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS02140 05cd58f4d78d8b4cd4daf19c220bbbe0 480 PRINTS PR00315 GTP-binding elongation factor signature 27 40 7.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CYCME_RS03360 3a3f73aa340b426b6d0045afa06f5a28 377 PANTHER PTHR12526:SF220 1 336 7.9E-72 T 23-04-2016 CYCME_RS03360 3a3f73aa340b426b6d0045afa06f5a28 377 SUPERFAMILY SSF53756 2 346 9.98E-55 T 23-04-2016 CYCME_RS03360 3a3f73aa340b426b6d0045afa06f5a28 377 Pfam PF00534 Glycosyl transferases group 1 184 342 8.9E-31 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CYCME_RS03360 3a3f73aa340b426b6d0045afa06f5a28 377 Gene3D G3DSA:3.40.50.2000 153 335 4.4E-21 T 23-04-2016 CYCME_RS03360 3a3f73aa340b426b6d0045afa06f5a28 377 PANTHER PTHR12526 1 336 7.9E-72 T 23-04-2016 CYCME_RS11050 8fb6caed20399a941a6c27812ba19bf1 228 Gene3D G3DSA:1.10.3900.10 3 147 1.9E-44 T 23-04-2016 CYCME_RS11050 8fb6caed20399a941a6c27812ba19bf1 228 SUPERFAMILY SSF160950 3 226 1.57E-60 T 23-04-2016 CYCME_RS11050 8fb6caed20399a941a6c27812ba19bf1 228 Gene3D G3DSA:2.60.440.10 148 226 5.6E-23 T 23-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain CYCME_RS11050 8fb6caed20399a941a6c27812ba19bf1 228 Pfam PF07072 Protein of unknown function (DUF1342) 3 202 5.5E-65 T 23-04-2016 IPR009777 Cell division protein ZapD CYCME_RS11050 8fb6caed20399a941a6c27812ba19bf1 228 PANTHER PTHR39455:SF1 20 227 3.1E-51 T 23-04-2016 CYCME_RS11050 8fb6caed20399a941a6c27812ba19bf1 228 PANTHER PTHR39455 20 227 3.1E-51 T 23-04-2016 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 Gene3D G3DSA:1.25.60.10 7 130 2.9E-25 T 23-04-2016 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 Pfam PF01769 Divalent cation transporter 323 444 4.3E-23 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 SUPERFAMILY SSF158791 11 136 1.05E-27 T 23-04-2016 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 Gene3D G3DSA:3.10.580.10 131 261 1.1E-19 T 23-04-2016 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 PANTHER PTHR41394:SF1 236 439 1.2E-54 T 23-04-2016 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 SUPERFAMILY SSF161093 280 451 4.97E-47 T 23-04-2016 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 PANTHER PTHR41394 236 439 1.2E-54 T 23-04-2016 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 451 7.6E-87 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 SUPERFAMILY SSF54631 139 278 1.59E-29 T 23-04-2016 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 SMART SM00924 36 139 5.0E-36 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 SMART SM00116 210 258 0.17 T 23-04-2016 IPR000644 CBS domain CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 SMART SM00116 146 199 0.072 T 23-04-2016 IPR000644 CBS domain CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 Pfam PF03448 MgtE intracellular N domain 36 137 4.5E-25 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 Gene3D G3DSA:1.10.357.20 280 451 6.2E-50 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 Pfam PF00571 CBS domain 207 257 1.4E-5 T 23-04-2016 IPR000644 CBS domain CYCME_RS03980 b7393d65baf37cda323d5aab2112a71b 452 Pfam PF00571 CBS domain 140 195 1.5E-7 T 23-04-2016 IPR000644 CBS domain CYCME_RS11065 12eee2556528bb4c7307747accc16413 406 PANTHER PTHR23100 7 406 1.1E-166 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CYCME_RS11065 12eee2556528bb4c7307747accc16413 406 PANTHER PTHR23100:SF0 7 406 1.1E-166 T 23-04-2016 CYCME_RS11065 12eee2556528bb4c7307747accc16413 406 Gene3D G3DSA:3.60.70.12 10 277 8.9E-94 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CYCME_RS11065 12eee2556528bb4c7307747accc16413 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 406 9.0E-112 T 23-04-2016 CYCME_RS11065 12eee2556528bb4c7307747accc16413 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 141.746 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CYCME_RS11065 12eee2556528bb4c7307747accc16413 406 Pfam PF01960 ArgJ family 20 406 2.4E-138 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CYCME_RS11065 12eee2556528bb4c7307747accc16413 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 10 406 1.4E-121 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CYCME_RS11065 12eee2556528bb4c7307747accc16413 406 SUPERFAMILY SSF56266 14 403 8.2E-132 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 255 1.1E-87 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 SUPERFAMILY SSF56300 1 261 8.2E-55 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 PANTHER PTHR24032:SF27 1 263 1.6E-108 T 23-04-2016 CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 PANTHER PTHR24032 1 263 1.6E-108 T 23-04-2016 CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 Gene3D G3DSA:3.60.21.10 169 266 8.6E-57 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 Gene3D G3DSA:3.60.21.10 1 132 8.6E-57 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 PIRSF PIRSF000903 1 273 1.2E-106 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 270 43.9 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CYCME_RS02820 e37bce91ab9081e9cb382b57ed11ecf9 275 Pfam PF00149 Calcineurin-like phosphoesterase 1 154 1.1E-15 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 14 228 4.6E-37 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 PANTHER PTHR32119:SF2 1 242 1.1E-81 T 23-04-2016 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 12 235 31.55 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 PANTHER PTHR32119 1 242 1.1E-81 T 23-04-2016 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 SUPERFAMILY SSF51366 13 234 8.17E-56 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 15 230 1.2E-52 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 Gene3D G3DSA:3.20.20.70 12 234 1.5E-65 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 67 80 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS09600 868398aaca277e83cf9c485d2afca19a 248 SMART SM00934 14 230 1.1E-67 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 SUPERFAMILY SSF56601 666 807 1.45E-125 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 SUPERFAMILY SSF56601 430 618 1.45E-125 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 SUPERFAMILY SSF56601 219 241 1.45E-125 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 SUPERFAMILY SSF56601 270 321 1.45E-125 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 Gene3D G3DSA:2.40.50.140 355 429 1.0E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 PANTHER PTHR32282:SF5 429 620 8.4E-240 T 23-04-2016 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 PANTHER PTHR32282:SF5 666 817 8.4E-240 T 23-04-2016 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 PANTHER PTHR32282:SF5 14 318 8.4E-240 T 23-04-2016 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 761 6.1E-177 T 23-04-2016 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 Gene3D G3DSA:3.40.710.10 430 619 1.3E-128 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 Gene3D G3DSA:3.40.710.10 667 807 1.3E-128 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 Gene3D G3DSA:3.40.710.10 241 321 1.3E-128 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 Pfam PF00912 Transglycosylase 65 237 2.7E-58 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 PANTHER PTHR32282 429 620 8.4E-240 T 23-04-2016 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 PANTHER PTHR32282 666 817 8.4E-240 T 23-04-2016 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 PANTHER PTHR32282 14 318 8.4E-240 T 23-04-2016 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 Pfam PF17092 Penicillin-binding protein OB-like domain 324 433 3.9E-24 T 23-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 Gene3D G3DSA:1.10.3810.10 64 240 3.3E-67 T 23-04-2016 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 Pfam PF00905 Penicillin binding protein transpeptidase domain 435 750 3.0E-27 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CYCME_RS00275 7153168e21ad2866596e698489c0dafd 828 SUPERFAMILY SSF53955 51 264 9.56E-73 T 23-04-2016 IPR023346 Lysozyme-like domain CYCME_RS04305 77404a841aee11b4b4cfc1e06ac140f7 161 Pfam PF04608 Phosphatidylglycerophosphatase A 18 157 2.8E-50 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CYCME_RS04305 77404a841aee11b4b4cfc1e06ac140f7 161 PIRSF PIRSF006162 7 161 7.4E-52 T 23-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CYCME_RS04305 77404a841aee11b4b4cfc1e06ac140f7 161 SUPERFAMILY SSF101307 12 157 9.16E-43 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CYCME_RS04305 77404a841aee11b4b4cfc1e06ac140f7 161 PANTHER PTHR36305 3 161 9.9E-58 T 23-04-2016 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 SUPERFAMILY SSF53244 293 423 2.56E-24 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 PIRSF PIRSF001563 4 424 7.6E-105 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 Pfam PF08245 Mur ligase middle domain 53 266 2.6E-10 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 Gene3D G3DSA:3.90.190.20 293 423 7.5E-31 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 SUPERFAMILY SSF53623 10 289 1.49E-77 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 PANTHER PTHR11136 13 424 3.8E-102 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 Gene3D G3DSA:3.40.1190.10 10 290 8.6E-81 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 422 1.9E-99 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CYCME_RS07335 0673c0ec1a1907689d586d1a1bdfcae5 424 PANTHER PTHR11136:SF0 13 424 3.8E-102 T 23-04-2016 CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 PANTHER PTHR11019 192 338 3.2E-21 T 23-04-2016 CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 PANTHER PTHR11019:SF52 192 338 3.2E-21 T 23-04-2016 CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 Gene3D G3DSA:1.10.10.60 288 334 1.3E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 SUPERFAMILY SSF46689 288 333 9.41E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 7.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 7.8E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 SMART SM00342 248 330 1.4E-9 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 197 1.7E-25 T 23-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CYCME_RS10345 d12b0d15f14ea6044300e699179a5e25 340 Pfam PF12833 Helix-turn-helix domain 255 331 3.7E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 SUPERFAMILY SSF55957 699 789 4.19E-22 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 SUPERFAMILY SSF53738 589 697 3.34E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 Gene3D G3DSA:3.30.310.50 702 790 2.9E-28 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 PANTHER PTHR22573:SF28 321 792 4.1E-188 T 23-04-2016 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 502 521 1.3E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 565 580 1.3E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 536 549 1.3E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 431 445 1.3E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 590 699 4.3E-22 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 Gene3D G3DSA:3.40.120.10 504 581 1.3E-35 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 Gene3D G3DSA:3.40.120.10 340 478 5.7E-36 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 343 471 4.7E-36 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 432 441 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 489 585 2.7E-27 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 SUPERFAMILY SSF53738 340 475 1.33E-37 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 PANTHER PTHR22573 321 792 4.1E-188 T 23-04-2016 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 SUPERFAMILY SSF53738 486 587 2.71E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 725 781 1.1E-11 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS02590 b7491afb82a2fcc49342b55b1f017e5e 793 Gene3D G3DSA:3.40.120.10 582 699 1.4E-43 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 SUPERFAMILY SSF52540 255 541 1.06E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 132 226 4.4E-13 T 23-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 PANTHER PTHR30195:SF13 468 955 0.0 T 23-04-2016 CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 PANTHER PTHR30195:SF13 1 442 0.0 T 23-04-2016 CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 PANTHER PTHR30195 468 955 0.0 T 23-04-2016 CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 PANTHER PTHR30195 1 442 0.0 T 23-04-2016 CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 Gene3D G3DSA:3.40.50.300 278 493 4.2E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 SMART SM00487 287 512 2.2E-11 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS11985 a6aca3d415f1eb0e8bf48166608a1053 1008 Pfam PF04851 Type III restriction enzyme, res subunit 291 490 6.4E-16 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CYCME_RS02110 eeea310b27c15d52614143481a48b59d 139 Pfam PF02566 OsmC-like protein 34 131 2.8E-19 T 23-04-2016 IPR003718 OsmC/Ohr family CYCME_RS02110 eeea310b27c15d52614143481a48b59d 139 Gene3D G3DSA:2.20.25.10 1 34 1.5E-18 T 23-04-2016 CYCME_RS02110 eeea310b27c15d52614143481a48b59d 139 Gene3D G3DSA:3.30.300.20 39 136 6.5E-42 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CYCME_RS02110 eeea310b27c15d52614143481a48b59d 139 PANTHER PTHR34352 1 139 2.9E-52 T 23-04-2016 CYCME_RS02110 eeea310b27c15d52614143481a48b59d 139 SUPERFAMILY SSF82784 1 137 1.83E-42 T 23-04-2016 IPR003718 OsmC/Ohr family CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 PANTHER PTHR10744 9 84 3.6E-31 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 SUPERFAMILY SSF50249 9 85 1.71E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 2.2E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 2.2E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 2.2E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 78 1.1E-32 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 78 2.0E-23 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 Gene3D G3DSA:2.40.50.140 9 85 2.3E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 Pfam PF00366 Ribosomal protein S17 13 79 3.1E-29 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03700 83fe759e33b6d25ebb41ece51b5c0b78 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 23.888 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09060 66ac097a02e2098279e18713b003d028 181 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 1 179 4.3E-77 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CYCME_RS09060 66ac097a02e2098279e18713b003d028 181 SUPERFAMILY SSF55620 1 179 2.52E-78 T 23-04-2016 CYCME_RS09060 66ac097a02e2098279e18713b003d028 181 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 58 74 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CYCME_RS09060 66ac097a02e2098279e18713b003d028 181 PANTHER PTHR11109 1 180 2.1E-115 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CYCME_RS09060 66ac097a02e2098279e18713b003d028 181 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 179 36.453 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CYCME_RS09060 66ac097a02e2098279e18713b003d028 181 Pfam PF01227 GTP cyclohydrolase I 2 178 4.9E-76 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CYCME_RS09060 66ac097a02e2098279e18713b003d028 181 Gene3D G3DSA:3.30.1130.10 51 179 5.4E-64 T 23-04-2016 CYCME_RS09060 66ac097a02e2098279e18713b003d028 181 Gene3D G3DSA:1.10.286.10 1 48 5.1E-20 T 23-04-2016 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.563 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 SUPERFAMILY SSF74731 2 115 3.79E-50 T 23-04-2016 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 Pfam PF00453 Ribosomal protein L20 3 109 1.1E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 PANTHER PTHR10986 2 117 1.9E-63 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 5.0E-13 T 23-04-2016 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 PANTHER PTHR10986:SF12 2 117 1.9E-63 T 23-04-2016 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.4E-51 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 Gene3D G3DSA:1.10.1900.20 55 116 3.6E-29 T 23-04-2016 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 7.8E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 7.8E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CYCME_RS08810 670ef97c7f0df2a9c1a1ac6164f9982f 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 7.8E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 Gene3D G3DSA:3.50.50.60 471 626 6.8E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 Gene3D G3DSA:3.50.50.60 359 466 4.8E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 PANTHER PTHR22893:SF25 3 417 8.2E-206 T 23-04-2016 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 SUPERFAMILY SSF51905 349 673 2.46E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 SUPERFAMILY SSF51395 3 361 2.52E-109 T 23-04-2016 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 Gene3D G3DSA:3.20.20.70 3 358 1.2E-121 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 639 1.3E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 1.1E-13 T 23-04-2016 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 459 477 1.1E-13 T 23-04-2016 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 517 1.1E-13 T 23-04-2016 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 1.1E-13 T 23-04-2016 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 330 2.1E-83 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CYCME_RS05945 699d711fb1f0a672719e4b52808b81f4 675 PANTHER PTHR22893 3 417 8.2E-206 T 23-04-2016 CYCME_RS04995 aaa191ed5b5e3b0701cdcb45d1314d80 132 PANTHER PTHR34182 4 129 5.7E-27 T 23-04-2016 CYCME_RS04995 aaa191ed5b5e3b0701cdcb45d1314d80 132 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 75 2.0E-25 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CYCME_RS04995 aaa191ed5b5e3b0701cdcb45d1314d80 132 PRINTS PR01651 Protein-export SecG membrane protein signature 40 56 3.7E-35 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CYCME_RS04995 aaa191ed5b5e3b0701cdcb45d1314d80 132 PRINTS PR01651 Protein-export SecG membrane protein signature 56 78 3.7E-35 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CYCME_RS04995 aaa191ed5b5e3b0701cdcb45d1314d80 132 PRINTS PR01651 Protein-export SecG membrane protein signature 5 25 3.7E-35 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CYCME_RS04995 aaa191ed5b5e3b0701cdcb45d1314d80 132 PRINTS PR01651 Protein-export SecG membrane protein signature 25 39 3.7E-35 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CYCME_RS04995 aaa191ed5b5e3b0701cdcb45d1314d80 132 Pfam PF03840 Preprotein translocase SecG subunit 6 75 1.2E-20 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CYCME_RS07755 f06eab40fb0b9a02ae9327bf91dbe186 81 Pfam PF04226 Transglycosylase associated protein 32 79 3.2E-12 T 23-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 CYCME_RS11915 f728737204a8d035a2f0c0fb12db9bf4 452 Pfam PF07396 Phosphate-selective porin O and P 96 452 8.4E-64 T 23-04-2016 IPR010870 Phosphate-selective porin O/P CYCME_RS11915 f728737204a8d035a2f0c0fb12db9bf4 452 Gene3D G3DSA:2.40.160.10 71 452 3.1E-116 T 23-04-2016 IPR023614 Porin domain CYCME_RS11915 f728737204a8d035a2f0c0fb12db9bf4 452 SUPERFAMILY SSF56935 93 353 3.4E-12 T 23-04-2016 CYCME_RS11915 f728737204a8d035a2f0c0fb12db9bf4 452 SUPERFAMILY SSF56935 381 446 3.4E-12 T 23-04-2016 CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 SMART SM00382 216 421 6.8E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 SUPERFAMILY SSF52540 198 447 4.44E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 Gene3D G3DSA:3.40.50.300 184 456 1.2E-111 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 456 1.6E-179 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 1.7E-35 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 Pfam PF03796 DnaB-like helicase C terminal domain 199 454 8.9E-119 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 Gene3D G3DSA:1.10.860.10 21 122 2.4E-37 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 SUPERFAMILY SSF48024 19 130 3.27E-37 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CYCME_RS09150 c0788b8b35289574986eac00d9df80a9 465 PANTHER PTHR30153 5 464 1.2E-217 T 23-04-2016 CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 PIRSF PIRSF038945 2 378 1.2E-152 T 23-04-2016 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1|UniPathway: UPA00050 CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 TIGRFAM TIGR00260 thrC: threonine synthase 13 352 6.8E-91 T 23-04-2016 IPR004450 Threonine synthase-like CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 PANTHER PTHR10314:SF5 236 357 2.3E-129 T 23-04-2016 CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 PANTHER PTHR10314:SF5 9 207 2.3E-129 T 23-04-2016 CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 SUPERFAMILY SSF53686 238 378 8.12E-104 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 SUPERFAMILY SSF53686 12 207 8.12E-104 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 345 6.7E-67 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 PANTHER PTHR10314 236 357 2.3E-129 T 23-04-2016 CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 PANTHER PTHR10314 9 207 2.3E-129 T 23-04-2016 CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 Gene3D G3DSA:3.40.50.1100 65 150 9.7E-43 T 23-04-2016 CYCME_RS07535 181e8e0dc894bc6587fc5455b9063434 380 Gene3D G3DSA:3.40.50.1100 151 356 5.5E-44 T 23-04-2016 CYCME_RS07600 2488bcb305528db51dcfcabf19d4a4df 94 Gene3D G3DSA:1.20.5.170 31 64 2.9E-5 T 23-04-2016 CYCME_RS07600 2488bcb305528db51dcfcabf19d4a4df 94 PANTHER PTHR37485 2 89 2.1E-24 T 23-04-2016 CYCME_RS07600 2488bcb305528db51dcfcabf19d4a4df 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 90 25.239 T 23-04-2016 IPR023081 Cell division protein FtsB CYCME_RS07600 2488bcb305528db51dcfcabf19d4a4df 94 PANTHER PTHR37485:SF1 2 89 2.1E-24 T 23-04-2016 CYCME_RS07600 2488bcb305528db51dcfcabf19d4a4df 94 Pfam PF04977 Septum formation initiator 12 89 4.7E-21 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 Gene3D G3DSA:3.30.110.10 45 135 7.8E-40 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 PANTHER PTHR10938 1 136 1.3E-52 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 Gene3D G3DSA:3.10.20.80 2 44 2.5E-18 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 49 134 5.7E-38 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 135 1.6E-56 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 SUPERFAMILY SSF54364 2 44 1.29E-15 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 SUPERFAMILY SSF55200 50 135 5.1E-34 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 40 1.3E-15 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CYCME_RS08820 a60c7fddb94f0a62caf07b0d8ea8e5ec 137 ProSitePatterns PS00938 Initiation factor 3 signature. 24 37 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CYCME_RS02560 0487a508831931ef8eed5cc5fc8ceef3 130 Pfam PF00355 Rieske [2Fe-2S] domain 41 103 8.6E-10 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS02560 0487a508831931ef8eed5cc5fc8ceef3 130 SUPERFAMILY SSF50022 40 123 1.31E-17 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS02560 0487a508831931ef8eed5cc5fc8ceef3 130 Gene3D G3DSA:2.102.10.10 16 122 2.7E-15 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS02560 0487a508831931ef8eed5cc5fc8ceef3 130 PANTHER PTHR40261:SF2 42 124 4.0E-19 T 23-04-2016 CYCME_RS02560 0487a508831931ef8eed5cc5fc8ceef3 130 PANTHER PTHR40261 42 124 4.0E-19 T 23-04-2016 CYCME_RS11870 d43d9f36f7dda28cd06eeb38110aaccf 195 Gene3D G3DSA:1.10.530.10 38 157 3.6E-7 T 23-04-2016 CYCME_RS11870 d43d9f36f7dda28cd06eeb38110aaccf 195 SUPERFAMILY SSF53955 7 163 3.75E-22 T 23-04-2016 IPR023346 Lysozyme-like domain CYCME_RS09375 4eade82b3d9de26ec0c505b4a84de4eb 339 PANTHER PTHR11108 5 202 2.4E-85 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CYCME_RS09375 4eade82b3d9de26ec0c505b4a84de4eb 339 PANTHER PTHR11108 225 330 2.4E-85 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CYCME_RS09375 4eade82b3d9de26ec0c505b4a84de4eb 339 Gene3D G3DSA:3.40.50.1400 195 335 3.6E-30 T 23-04-2016 CYCME_RS09375 4eade82b3d9de26ec0c505b4a84de4eb 339 Hamap MF_00323 Ferrochelatase [hemH]. 2 338 34.137 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CYCME_RS09375 4eade82b3d9de26ec0c505b4a84de4eb 339 TIGRFAM TIGR00109 hemH: ferrochelatase 2 212 5.3E-45 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CYCME_RS09375 4eade82b3d9de26ec0c505b4a84de4eb 339 SUPERFAMILY SSF53800 2 334 8.83E-84 T 23-04-2016 CYCME_RS09375 4eade82b3d9de26ec0c505b4a84de4eb 339 Gene3D G3DSA:3.40.50.1400 3 194 2.6E-54 T 23-04-2016 CYCME_RS09375 4eade82b3d9de26ec0c505b4a84de4eb 339 Pfam PF00762 Ferrochelatase 4 335 2.7E-97 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CYCME_RS07725 481f63ca8cf445525ac310db478a84ed 317 Pfam PF12345 Protein of unknown function (DUF3641) 179 314 4.7E-56 T 23-04-2016 IPR024521 Domain of unknown function DUF3641 CYCME_RS07725 481f63ca8cf445525ac310db478a84ed 317 PANTHER PTHR11228 15 313 1.6E-120 T 23-04-2016 CYCME_RS07725 481f63ca8cf445525ac310db478a84ed 317 TIGRFAM TIGR04167 rSAM_SeCys: radical SAM/Cys-rich domain protein 16 315 6.1E-138 T 23-04-2016 IPR026351 Radical SAM/Cys-rich domain protein CYCME_RS07725 481f63ca8cf445525ac310db478a84ed 317 SUPERFAMILY SSF102114 18 312 1.1E-34 T 23-04-2016 CYCME_RS07725 481f63ca8cf445525ac310db478a84ed 317 Gene3D G3DSA:3.20.20.70 15 313 1.2E-21 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS07725 481f63ca8cf445525ac310db478a84ed 317 Pfam PF04055 Radical SAM superfamily 29 163 2.4E-8 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS07725 481f63ca8cf445525ac310db478a84ed 317 PANTHER PTHR11228:SF20 15 313 1.6E-120 T 23-04-2016 CYCME_RS11200 fa0ff13c8666bb2e50abd1c9a2ac6e3a 137 PANTHER PTHR30558:SF3 4 137 1.4E-12 T 23-04-2016 CYCME_RS11200 fa0ff13c8666bb2e50abd1c9a2ac6e3a 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 132 1.8E-20 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CYCME_RS11200 fa0ff13c8666bb2e50abd1c9a2ac6e3a 137 PANTHER PTHR30558 4 137 1.4E-12 T 23-04-2016 CYCME_RS10705 358da39243b44e86eac73fb6e4ad8234 158 PANTHER PTHR38695:SF1 3 146 5.1E-25 T 23-04-2016 CYCME_RS10705 358da39243b44e86eac73fb6e4ad8234 158 PANTHER PTHR38695 3 146 5.1E-25 T 23-04-2016 CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 161 169 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 PANTHER PTHR24031 1 378 4.4E-214 T 23-04-2016 CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 387 51.385 T 23-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 PANTHER PTHR24031:SF173 1 378 4.4E-214 T 23-04-2016 CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 Pfam PF00270 DEAD/DEAH box helicase 33 206 8.6E-47 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 SMART SM00487 28 227 2.1E-52 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 Pfam PF00271 Helicase conserved C-terminal domain 241 349 2.9E-28 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 Gene3D G3DSA:3.40.50.300 9 220 6.6E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 Gene3D G3DSA:3.40.50.300 221 379 4.5E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 SUPERFAMILY SSF52540 81 360 6.87E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02890 8f87005e6b9fc496ef6168d0256ba8e5 420 SMART SM00490 268 349 1.0E-30 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 Gene3D G3DSA:3.40.50.620 3 145 1.2E-37 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 PANTHER PTHR31964:SF42 1 148 4.7E-22 T 23-04-2016 CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 PANTHER PTHR31964 1 148 4.7E-22 T 23-04-2016 CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 SUPERFAMILY SSF52402 4 145 4.1E-34 T 23-04-2016 CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 PRINTS PR01438 Universal stress protein signature 106 118 6.7E-15 T 23-04-2016 IPR006015 Universal stress protein A CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 PRINTS PR01438 Universal stress protein signature 4 22 6.7E-15 T 23-04-2016 IPR006015 Universal stress protein A CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 PRINTS PR01438 Universal stress protein signature 123 145 6.7E-15 T 23-04-2016 IPR006015 Universal stress protein A CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 PIRSF PIRSF006276 1 148 8.7E-41 T 23-04-2016 IPR006015 Universal stress protein A CYCME_RS09875 f459e391a84559c904f9fb3e03d5e8c5 148 Pfam PF00582 Universal stress protein family 4 145 3.8E-30 T 23-04-2016 IPR006016 UspA GO:0006950 CYCME_RS02960 88b36a385bfa4b109554d457f2ff7e47 167 Pfam PF04186 FxsA cytoplasmic membrane protein 9 114 1.1E-32 T 23-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CYCME_RS02960 88b36a385bfa4b109554d457f2ff7e47 167 PANTHER PTHR35335:SF1 4 156 3.0E-34 T 23-04-2016 CYCME_RS02960 88b36a385bfa4b109554d457f2ff7e47 167 PANTHER PTHR35335 4 156 3.0E-34 T 23-04-2016 CYCME_RS10480 e793c4654ddb7fe3329c78e7987a24c8 217 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 204 9.0E-43 T 23-04-2016 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 CYCME_RS10480 e793c4654ddb7fe3329c78e7987a24c8 217 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 5 45 3.1E-13 T 23-04-2016 IPR013422 CRISPR-associated protein Cas5, N-terminal CYCME_RS10480 e793c4654ddb7fe3329c78e7987a24c8 217 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 4 205 2.5E-61 T 23-04-2016 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PANTHER PTHR10422 8 526 0.0 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 Gene3D G3DSA:1.20.210.10 11 525 1.0E-217 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 23 524 7.5E-211 T 23-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 139 151 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 353 371 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 309 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 318 339 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 216 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 269 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 22 47 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 186 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 69 92 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 381 400 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 452 6.4E-123 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 250 304 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 PANTHER PTHR10422:SF27 8 526 0.0 T 23-04-2016 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 SUPERFAMILY SSF81442 19 525 1.57E-192 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03105 a778ab393f94942b71a31322a9f166e5 526 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 31 472 2.3E-151 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS03560 6bfc37398dfd38e8c8876d35ffda7c1e 189 Gene3D G3DSA:3.40.50.1470 2 188 9.3E-70 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CYCME_RS03560 6bfc37398dfd38e8c8876d35ffda7c1e 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CYCME_RS03560 6bfc37398dfd38e8c8876d35ffda7c1e 189 Pfam PF01195 Peptidyl-tRNA hydrolase 4 184 3.0E-56 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CYCME_RS03560 6bfc37398dfd38e8c8876d35ffda7c1e 189 PANTHER PTHR17224 5 188 4.4E-73 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CYCME_RS03560 6bfc37398dfd38e8c8876d35ffda7c1e 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CYCME_RS03560 6bfc37398dfd38e8c8876d35ffda7c1e 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 187 9.5E-64 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CYCME_RS03560 6bfc37398dfd38e8c8876d35ffda7c1e 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 180 35.347 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CYCME_RS03560 6bfc37398dfd38e8c8876d35ffda7c1e 189 SUPERFAMILY SSF53178 2 187 6.93E-67 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CYCME_RS01895 978459211b61b2822348fbb4bc8872c5 207 SUPERFAMILY SSF52833 1 83 2.4E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS01895 978459211b61b2822348fbb4bc8872c5 207 Gene3D G3DSA:1.20.1050.10 91 202 7.2E-20 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS01895 978459211b61b2822348fbb4bc8872c5 207 Gene3D G3DSA:3.40.30.10 2 90 3.8E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS01895 978459211b61b2822348fbb4bc8872c5 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 194 1.1E-6 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CYCME_RS01895 978459211b61b2822348fbb4bc8872c5 207 SUPERFAMILY SSF47616 80 201 2.37E-21 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS01895 978459211b61b2822348fbb4bc8872c5 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 3.0E-17 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CYCME_RS01895 978459211b61b2822348fbb4bc8872c5 207 PANTHER PTHR11260 2 195 2.4E-36 T 23-04-2016 CYCME_RS10545 f4d6d00e818a3ec876b3505e714ebd11 332 Gene3D G3DSA:3.30.1150.10 206 332 2.4E-22 T 23-04-2016 CYCME_RS10545 f4d6d00e818a3ec876b3505e714ebd11 332 Pfam PF13103 TonB C terminal 243 318 7.8E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CYCME_RS10545 f4d6d00e818a3ec876b3505e714ebd11 332 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 270 314 1.1E-9 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CYCME_RS10545 f4d6d00e818a3ec876b3505e714ebd11 332 TIGRFAM TIGR02794 tolA_full: protein TolA 10 330 7.5E-50 T 23-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CYCME_RS10545 f4d6d00e818a3ec876b3505e714ebd11 332 SUPERFAMILY SSF74653 239 331 1.02E-22 T 23-04-2016 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 PANTHER PTHR21266 20 366 3.1E-61 T 23-04-2016 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 Gene3D G3DSA:3.90.380.10 140 412 5.3E-55 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 PANTHER PTHR21266:SF30 20 366 3.1E-61 T 23-04-2016 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 23 48 3.8E-35 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 135 161 3.8E-35 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 177 199 3.8E-35 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 95 115 3.8E-35 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 74 94 3.8E-35 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 53 68 3.8E-35 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 Pfam PF00355 Rieske [2Fe-2S] domain 38 121 7.9E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 SUPERFAMILY SSF55961 154 411 1.57E-40 T 23-04-2016 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 SUPERFAMILY SSF50022 7 150 3.8E-42 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 Gene3D G3DSA:2.102.10.10 38 139 1.5E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 81 104 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS01140 c3218a7c5db9dd3ff131f8daeedeedda 413 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 185 409 1.4E-15 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 SMART SM00257 529 573 1.5 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 SMART SM00257 608 652 0.14 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 SMART SM00257 445 489 9.0E-13 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 SMART SM00257 382 426 6.5E-13 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 Pfam PF01476 LysM domain 446 488 4.4E-13 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 Pfam PF01476 LysM domain 612 652 0.016 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 Pfam PF01476 LysM domain 383 426 2.4E-11 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 Pfam PF01464 Transglycosylase SLT domain 146 255 2.9E-19 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 Gene3D G3DSA:3.10.350.10 382 426 7.8E-15 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 Gene3D G3DSA:3.10.350.10 443 488 6.5E-15 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 PANTHER PTHR21666:SF219 126 488 3.7E-41 T 23-04-2016 CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 Gene3D G3DSA:1.10.530.10 138 253 1.0E-25 T 23-04-2016 CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 SUPERFAMILY SSF54106 444 488 9.55E-10 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 SUPERFAMILY SSF53955 133 248 1.69E-25 T 23-04-2016 IPR023346 Lysozyme-like domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 SUPERFAMILY SSF54106 382 426 1.83E-9 T 23-04-2016 IPR018392 LysM domain CYCME_RS11865 c1fc86cada7f18dfcc06704a819e6322 659 PANTHER PTHR21666 126 488 3.7E-41 T 23-04-2016 CYCME_RS05905 b12ce87653f3c868abc13ea753c46d4b 480 PANTHER PTHR11699 11 469 1.3E-181 T 23-04-2016 CYCME_RS05905 b12ce87653f3c868abc13ea753c46d4b 480 Pfam PF00171 Aldehyde dehydrogenase family 17 475 2.0E-149 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS05905 b12ce87653f3c868abc13ea753c46d4b 480 Gene3D G3DSA:3.40.605.10 10 263 2.3E-83 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS05905 b12ce87653f3c868abc13ea753c46d4b 480 Gene3D G3DSA:3.40.309.10 264 442 1.4E-59 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CYCME_RS05905 b12ce87653f3c868abc13ea753c46d4b 480 SUPERFAMILY SSF53720 7 476 5.76E-147 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 Gene3D G3DSA:3.40.50.80 269 406 9.7E-41 T 23-04-2016 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 SUPERFAMILY SSF63380 104 270 6.3E-36 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 407 62.346 T 23-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 1.3E-16 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 SUPERFAMILY SSF54292 37 123 3.91E-22 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 PANTHER PTHR19370 204 407 3.9E-139 T 23-04-2016 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 PANTHER PTHR19370 61 175 3.9E-139 T 23-04-2016 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 Gene3D G3DSA:2.40.30.10 127 264 1.6E-60 T 23-04-2016 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 PANTHER PTHR19370:SF32 204 407 3.9E-139 T 23-04-2016 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 PANTHER PTHR19370:SF32 61 175 3.9E-139 T 23-04-2016 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 SUPERFAMILY SSF52343 256 403 1.23E-36 T 23-04-2016 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 PIRSF PIRSF000044 1 407 3.5E-222 T 23-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 6 407 1.4E-209 T 23-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 Pfam PF00970 Oxidoreductase FAD-binding domain 203 266 7.9E-11 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 39 114 4.3E-12 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS10100 9a9a8fbc1d0a785912bdfe0751d1f3b7 407 Gene3D G3DSA:3.10.20.30 42 126 3.7E-20 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 Pfam PF04055 Radical SAM superfamily 95 255 7.1E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 PANTHER PTHR10949 35 318 4.1E-175 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 Gene3D G3DSA:3.20.20.70 57 317 2.6E-73 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 PIRSF PIRSF005963 2 323 2.4E-136 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 22 77 5.1E-9 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 Hamap MF_00206 Lipoyl synthase [lipA]. 1 324 151.78 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 SMART SM00729 88 297 1.0E-13 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 TIGRFAM TIGR00510 lipA: lipoyl synthase 34 319 3.3E-139 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CYCME_RS03430 1fe485c4543029332f4d22e161a28999 324 SUPERFAMILY SSF102114 56 318 9.55E-69 T 23-04-2016 CYCME_RS00750 b71692f9560990554fdc901f692c1904 202 Pfam PF13743 Thioredoxin 6 182 4.1E-20 T 23-04-2016 CYCME_RS00750 b71692f9560990554fdc901f692c1904 202 PANTHER PTHR13887 1 178 5.0E-13 T 23-04-2016 CYCME_RS00750 b71692f9560990554fdc901f692c1904 202 Gene3D G3DSA:1.10.472.60 47 169 1.6E-36 T 23-04-2016 IPR023169 UPF0413, central domain CYCME_RS00750 b71692f9560990554fdc901f692c1904 202 SUPERFAMILY SSF52833 3 183 2.85E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 4 126 5.6E-53 T 23-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 Pfam PF13411 MerR HTH family regulatory protein 4 70 4.5E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 Gene3D G3DSA:1.10.1660.10 58 127 3.1E-26 T 23-04-2016 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 PANTHER PTHR30204:SF16 5 127 1.2E-28 T 23-04-2016 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.4E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.4E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.4E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 Gene3D G3DSA:1.10.1660.10 4 57 1.8E-22 T 23-04-2016 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 SUPERFAMILY SSF46955 4 126 3.44E-29 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 SMART SM00422 3 72 5.9E-20 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12215 14f5867c3ff6a52f29546b7a4c809296 128 PANTHER PTHR30204 5 127 1.2E-28 T 23-04-2016 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 4 126 5.6E-53 T 23-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 Pfam PF13411 MerR HTH family regulatory protein 4 70 4.5E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 Gene3D G3DSA:1.10.1660.10 58 127 3.1E-26 T 23-04-2016 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 PANTHER PTHR30204:SF16 5 127 1.2E-28 T 23-04-2016 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.4E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.4E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.4E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 Gene3D G3DSA:1.10.1660.10 4 57 1.8E-22 T 23-04-2016 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 SUPERFAMILY SSF46955 4 126 3.44E-29 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 SMART SM00422 3 72 5.9E-20 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01065 14f5867c3ff6a52f29546b7a4c809296 128 PANTHER PTHR30204 5 127 1.2E-28 T 23-04-2016 CYCME_RS10090 0ad8f1fb1148b8aa823fa49948ffdb26 65 Pfam PF04400 Protein of unknown function (DUF539) 22 62 9.1E-11 T 23-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM CYCME_RS02525 a115a962f68f697ec837d5dbf1387880 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 139 145 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 CYCME_RS02525 a115a962f68f697ec837d5dbf1387880 171 Gene3D G3DSA:1.10.10.10 88 169 2.5E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS02525 a115a962f68f697ec837d5dbf1387880 171 PANTHER PTHR10815 1 168 1.1E-47 T 23-04-2016 CYCME_RS02525 a115a962f68f697ec837d5dbf1387880 171 SUPERFAMILY SSF53155 8 94 8.24E-14 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 CYCME_RS02525 a115a962f68f697ec837d5dbf1387880 171 PANTHER PTHR10815:SF5 1 168 1.1E-47 T 23-04-2016 CYCME_RS02525 a115a962f68f697ec837d5dbf1387880 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 90 169 5.9E-29 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CYCME_RS02525 a115a962f68f697ec837d5dbf1387880 171 SUPERFAMILY SSF46767 88 169 2.62E-27 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CYCME_RS02525 a115a962f68f697ec837d5dbf1387880 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 89 168 6.3E-32 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CYCME_RS07450 838390b7dc12ecc0f631f05b1da0a6ff 131 SUPERFAMILY SSF81343 3 123 5.89E-37 T 23-04-2016 CYCME_RS07450 838390b7dc12ecc0f631f05b1da0a6ff 131 PIRSF PIRSF000178 1 125 3.0E-40 T 23-04-2016 CYCME_RS07450 838390b7dc12ecc0f631f05b1da0a6ff 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 123 1.4E-40 T 23-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 CYCME_RS07450 838390b7dc12ecc0f631f05b1da0a6ff 131 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 23-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 CYCME_RS07450 838390b7dc12ecc0f631f05b1da0a6ff 131 PANTHER PTHR10978 5 129 1.9E-41 T 23-04-2016 CYCME_RS07450 838390b7dc12ecc0f631f05b1da0a6ff 131 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 81 94 - T 23-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 CYCME_RS07450 838390b7dc12ecc0f631f05b1da0a6ff 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 119 1.6E-30 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 CYCME_RS07450 838390b7dc12ecc0f631f05b1da0a6ff 131 Gene3D G3DSA:1.20.1300.10 3 123 6.5E-44 T 23-04-2016 CYCME_RS06695 1c83fec5a859208811d242479d3989c6 334 PANTHER PTHR13748 246 333 1.6E-58 T 23-04-2016 CYCME_RS06695 1c83fec5a859208811d242479d3989c6 334 PANTHER PTHR13748 1 224 1.6E-58 T 23-04-2016 CYCME_RS06695 1c83fec5a859208811d242479d3989c6 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 185 3.4E-41 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CYCME_RS06695 1c83fec5a859208811d242479d3989c6 334 Gene3D G3DSA:3.40.50.300 10 207 5.4E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06695 1c83fec5a859208811d242479d3989c6 334 SUPERFAMILY SSF52540 12 203 2.4E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04595 630a6b770d18ede70c593789c05e0462 412 Pfam PF08668 HDOD domain 153 338 9.5E-40 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CYCME_RS04595 630a6b770d18ede70c593789c05e0462 412 Gene3D G3DSA:2.60.120.10 18 142 1.8E-11 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS04595 630a6b770d18ede70c593789c05e0462 412 SUPERFAMILY SSF109604 145 387 4.45E-49 T 23-04-2016 CYCME_RS04595 630a6b770d18ede70c593789c05e0462 412 Gene3D G3DSA:1.10.3150.10 144 404 8.1E-54 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CYCME_RS04595 630a6b770d18ede70c593789c05e0462 412 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 7.4E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS04595 630a6b770d18ede70c593789c05e0462 412 SUPERFAMILY SSF51206 11 116 9.69E-14 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS04595 630a6b770d18ede70c593789c05e0462 412 PANTHER PTHR33525 141 361 3.1E-48 T 23-04-2016 CYCME_RS04595 630a6b770d18ede70c593789c05e0462 412 PANTHER PTHR33525:SF2 141 361 3.1E-48 T 23-04-2016 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 275 38.791 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 Gene3D G3DSA:3.10.310.10 122 263 6.0E-48 T 23-04-2016 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 PANTHER PTHR31689:SF0 3 275 8.2E-124 T 23-04-2016 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 273 6.8E-93 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 SUPERFAMILY SSF54506 3 273 1.65E-47 T 23-04-2016 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 65 79 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 Pfam PF01678 Diaminopimelate epimerase 153 268 2.2E-26 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 Pfam PF01678 Diaminopimelate epimerase 5 123 1.1E-33 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 PANTHER PTHR31689 3 275 8.2E-124 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CYCME_RS01760 3f3a21268ed200648d5a49b24c00b299 275 Gene3D G3DSA:3.10.310.10 3 121 1.3E-49 T 23-04-2016 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 SMART SM01005 234 358 1.2E-61 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PANTHER PTHR30511:SF4 1 363 8.0E-147 T 23-04-2016 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 TIGRFAM TIGR00492 alr: alanine racemase 7 356 1.4E-109 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 Pfam PF01168 Alanine racemase, N-terminal domain 9 220 2.9E-64 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 Gene3D G3DSA:2.40.37.10 216 357 1.3E-52 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PANTHER PTHR30511 1 363 8.0E-147 T 23-04-2016 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 Gene3D G3DSA:3.20.20.10 11 215 1.5E-66 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 Hamap MF_01201 Alanine racemase. 2 358 33.095 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 27 43 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 61 79 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 340 353 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 250 265 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 156 167 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 193 220 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 267 282 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 121 133 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 PRINTS PR00992 Alanine racemase signature 288 305 3.4E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 SUPERFAMILY SSF50621 228 358 1.22E-45 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 SUPERFAMILY SSF51419 9 235 8.9E-65 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS09145 0e7a9ebf3963a8c25276733b1e708330 364 Pfam PF00842 Alanine racemase, C-terminal domain 234 356 2.6E-38 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 Gene3D G3DSA:1.10.3720.10 102 331 4.5E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 Gene3D G3DSA:1.10.3720.10 17 33 4.5E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 PANTHER PTHR30425 5 55 3.5E-99 T 23-04-2016 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 PANTHER PTHR30425 106 330 3.5E-99 T 23-04-2016 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 92 329 2.4E-79 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 PANTHER PTHR30425:SF1 5 55 3.5E-99 T 23-04-2016 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 PANTHER PTHR30425:SF1 106 330 3.5E-99 T 23-04-2016 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 322 1.1E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS11480 71e746e32346e694eb54dbf693114172 332 SUPERFAMILY SSF161098 112 322 2.62E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS03850 1f5282450d1647087394c0ad96837e7d 394 Gene3D G3DSA:3.40.50.2300 94 213 3.5E-16 T 23-04-2016 CYCME_RS03850 1f5282450d1647087394c0ad96837e7d 394 TIGRFAM TIGR03863 PQQ_ABC_bind: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system 47 392 4.2E-146 T 23-04-2016 IPR022478 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system CYCME_RS03850 1f5282450d1647087394c0ad96837e7d 394 Pfam PF13458 Periplasmic binding protein 95 213 9.2E-12 T 23-04-2016 IPR028081 Leucine-binding protein domain CYCME_RS03850 1f5282450d1647087394c0ad96837e7d 394 SUPERFAMILY SSF53822 53 358 3.66E-31 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CYCME_RS02040 3575fb60c9002cd120f9cee4b72586cc 160 SUPERFAMILY SSF89963 88 160 1.73E-28 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CYCME_RS02040 3575fb60c9002cd120f9cee4b72586cc 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 4.4E-65 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CYCME_RS02040 3575fb60c9002cd120f9cee4b72586cc 160 PANTHER PTHR30476:SF0 1 160 5.2E-90 T 23-04-2016 CYCME_RS02040 3575fb60c9002cd120f9cee4b72586cc 160 PANTHER PTHR30476 1 160 5.2E-90 T 23-04-2016 CYCME_RS02040 3575fb60c9002cd120f9cee4b72586cc 160 Gene3D G3DSA:3.30.70.990 9 93 6.9E-31 T 23-04-2016 CYCME_RS02040 3575fb60c9002cd120f9cee4b72586cc 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.225 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CYCME_RS02040 3575fb60c9002cd120f9cee4b72586cc 160 Gene3D G3DSA:3.30.70.860 94 160 2.8E-33 T 23-04-2016 CYCME_RS02040 3575fb60c9002cd120f9cee4b72586cc 160 SUPERFAMILY SSF89963 2 84 1.96E-29 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CYCME_RS07685 660515b335f839cca4ce81a2179bd3ac 247 SUPERFAMILY SSF64005 9 232 7.98E-82 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CYCME_RS07685 660515b335f839cca4ce81a2179bd3ac 247 Gene3D G3DSA:3.40.1180.10 9 245 1.1E-91 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CYCME_RS07685 660515b335f839cca4ce81a2179bd3ac 247 PANTHER PTHR10291 14 246 4.9E-109 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CYCME_RS07685 660515b335f839cca4ce81a2179bd3ac 247 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 14 237 3.5E-86 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CYCME_RS07685 660515b335f839cca4ce81a2179bd3ac 247 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 238 38.178 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CYCME_RS07685 660515b335f839cca4ce81a2179bd3ac 247 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 237 1.8E-78 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CYCME_RS07685 660515b335f839cca4ce81a2179bd3ac 247 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 PANTHER PTHR10046:SF43 9 776 0.0 T 23-04-2016 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 Hamap MF_01973 Lon protease [lon]. 10 772 70.684 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 Gene3D G3DSA:1.10.8.60 491 584 1.2E-30 T 23-04-2016 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 SUPERFAMILY SSF54211 595 770 3.03E-57 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 1.1E-53 T 23-04-2016 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 1.1E-53 T 23-04-2016 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 1.1E-53 T 23-04-2016 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 1.1E-53 T 23-04-2016 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 1.1E-53 T 23-04-2016 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 PANTHER PTHR10046 9 776 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 Gene3D G3DSA:3.30.230.10 589 771 3.6E-74 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 TIGRFAM TIGR00763 lon: endopeptidase La 11 771 1.0E-300 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 SUPERFAMILY SSF52540 315 587 3.58E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 PIRSF PIRSF001174 1 775 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 Gene3D G3DSA:3.40.50.300 316 488 3.5E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 SMART SM00464 9 202 4.0E-70 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 488 1.4E-18 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 SUPERFAMILY SSF88697 9 201 3.98E-49 T 23-04-2016 IPR015947 PUA-like domain CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 SMART SM00382 348 492 5.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 201 2.2E-41 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CYCME_RS08080 eb430c70e608ea48de572e84a32b86a6 803 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 5.1E-95 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 586 5.3E-221 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 Pfam PF01964 Radical SAM ThiC family 140 582 3.4E-200 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 588 56.361 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 Pfam PF13667 ThiC-associated domain 22 99 2.1E-31 T 23-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 PANTHER PTHR30557:SF1 131 161 0.0 T 23-04-2016 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 PANTHER PTHR30557:SF1 185 618 0.0 T 23-04-2016 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 PANTHER PTHR30557:SF1 22 97 0.0 T 23-04-2016 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 PANTHER PTHR30557 131 161 0.0 T 23-04-2016 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 PANTHER PTHR30557 185 618 0.0 T 23-04-2016 CYCME_RS00945 3b17951590178a2579ec0cec6425e444 621 PANTHER PTHR30557 22 97 0.0 T 23-04-2016 CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 Gene3D G3DSA:3.40.50.980 171 322 3.5E-36 T 23-04-2016 CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 Gene3D G3DSA:3.40.50.980 7 170 1.9E-35 T 23-04-2016 CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 Pfam PF00501 AMP-binding enzyme 11 418 5.9E-86 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 502 3.4E-17 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 SUPERFAMILY SSF56801 4 515 7.06E-132 T 23-04-2016 CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 PANTHER PTHR24096 5 509 1.5E-130 T 23-04-2016 CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 Gene3D G3DSA:3.30.300.30 414 512 3.9E-24 T 23-04-2016 CYCME_RS01160 b5fcf9da59ab2cf3917297bb1ea029f0 524 Gene3D G3DSA:2.30.38.10 337 409 4.2E-21 T 23-04-2016 CYCME_RS08565 e907085d0d467added1273c554d95e7f 487 Gene3D G3DSA:3.40.50.980 150 314 2.5E-26 T 23-04-2016 CYCME_RS08565 e907085d0d467added1273c554d95e7f 487 ProSitePatterns PS00455 Putative AMP-binding domain signature. 142 153 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS08565 e907085d0d467added1273c554d95e7f 487 Gene3D G3DSA:3.30.300.30 376 473 7.9E-4 T 23-04-2016 CYCME_RS08565 e907085d0d467added1273c554d95e7f 487 PANTHER PTHR24096 2 453 2.2E-77 T 23-04-2016 CYCME_RS08565 e907085d0d467added1273c554d95e7f 487 Gene3D G3DSA:2.30.38.10 315 368 1.1E-5 T 23-04-2016 CYCME_RS08565 e907085d0d467added1273c554d95e7f 487 Pfam PF00501 AMP-binding enzyme 8 378 2.7E-56 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS08565 e907085d0d467added1273c554d95e7f 487 Gene3D G3DSA:3.40.50.980 5 149 1.2E-24 T 23-04-2016 CYCME_RS08565 e907085d0d467added1273c554d95e7f 487 SUPERFAMILY SSF56801 2 485 2.49E-81 T 23-04-2016 CYCME_RS08915 f1c4b2facafb2f13a8b4800518c24cab 63 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.4E-21 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type CYCME_RS08915 f1c4b2facafb2f13a8b4800518c24cab 63 PANTHER PTHR41532 2 63 5.3E-14 T 23-04-2016 CYCME_RS08915 f1c4b2facafb2f13a8b4800518c24cab 63 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 2 47 3.9E-18 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type CYCME_RS02225 edd88ed0ef4c09cdb2443d2179dc6b47 276 PANTHER PTHR22916 5 260 1.9E-23 T 23-04-2016 CYCME_RS02225 edd88ed0ef4c09cdb2443d2179dc6b47 276 Gene3D G3DSA:3.90.550.10 5 241 1.0E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS02225 edd88ed0ef4c09cdb2443d2179dc6b47 276 Pfam PF00535 Glycosyl transferase family 2 6 132 4.5E-14 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS02225 edd88ed0ef4c09cdb2443d2179dc6b47 276 SUPERFAMILY SSF53448 5 237 1.78E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 Pfam PF00303 Thymidylate synthase 2 264 1.4E-120 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.029 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 PANTHER PTHR11548 1 264 6.4E-184 T 23-04-2016 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 Gene3D G3DSA:3.30.572.10 1 264 1.8E-131 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 2.5E-92 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 2.7E-42 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 SUPERFAMILY SSF55831 1 264 1.31E-127 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 23-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.1E-48 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.1E-48 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.1E-48 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.1E-48 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02810 d8475fbc7e741ecb89860ddbad4c2859 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.1E-48 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 PANTHER PTHR30115 1 112 5.2E-71 T 23-04-2016 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-42 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-42 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-42 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-42 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 PIRSF PIRSF039144 1 112 1.7E-53 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 SUPERFAMILY SSF54913 1 112 1.72E-44 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 PANTHER PTHR30115:SF12 1 112 5.2E-71 T 23-04-2016 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.5E-42 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 SMART SM00938 4 105 1.2E-64 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS02015 9e5d44a5ba8bdeda31f6efdd177fae20 112 Gene3D G3DSA:3.30.70.120 1 112 1.6E-49 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYCME_RS09500 cf424d31c69e52332eae64bb8ab701a8 564 Pfam PF07244 Surface antigen variable number repeat 101 175 2.9E-8 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CYCME_RS09500 cf424d31c69e52332eae64bb8ab701a8 564 Pfam PF07244 Surface antigen variable number repeat 193 251 4.3E-5 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CYCME_RS09500 cf424d31c69e52332eae64bb8ab701a8 564 PANTHER PTHR12815:SF12 1 564 1.1E-144 T 23-04-2016 CYCME_RS09500 cf424d31c69e52332eae64bb8ab701a8 564 Pfam PF01103 Surface antigen 285 561 7.3E-25 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 CYCME_RS09500 cf424d31c69e52332eae64bb8ab701a8 564 PANTHER PTHR12815 1 564 1.1E-144 T 23-04-2016 CYCME_RS09500 cf424d31c69e52332eae64bb8ab701a8 564 Gene3D G3DSA:2.40.160.50 300 552 3.6E-13 T 23-04-2016 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 Gene3D G3DSA:3.90.640.10 191 263 1.1E-28 T 23-04-2016 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 SUPERFAMILY SSF53067 9 152 2.3E-35 T 23-04-2016 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 338 4.6E-157 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 PANTHER PTHR19375:SF117 9 330 1.0E-178 T 23-04-2016 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 SUPERFAMILY SSF53067 154 335 3.18E-50 T 23-04-2016 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 Pfam PF06723 MreB/Mbl protein 11 337 1.1E-146 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.4E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 Gene3D G3DSA:3.30.420.40 9 163 2.7E-43 T 23-04-2016 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 PANTHER PTHR19375 9 330 1.0E-178 T 23-04-2016 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 Gene3D G3DSA:3.30.420.40 164 190 1.0E-33 T 23-04-2016 CYCME_RS03485 0f0dbc43facd9345fae07c1b1c6d5ba5 347 Gene3D G3DSA:3.30.420.40 267 321 1.0E-33 T 23-04-2016 CYCME_RS00790 6d86ab633655f3215588971c03776b4d 221 SUPERFAMILY SSF74653 137 206 3.92E-18 T 23-04-2016 CYCME_RS00790 6d86ab633655f3215588971c03776b4d 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 69 79 1.0E-7 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CYCME_RS00790 6d86ab633655f3215588971c03776b4d 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 160 1.0E-7 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CYCME_RS00790 6d86ab633655f3215588971c03776b4d 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 178 1.0E-7 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CYCME_RS00790 6d86ab633655f3215588971c03776b4d 221 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 218 2.4E-19 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CYCME_RS00790 6d86ab633655f3215588971c03776b4d 221 Gene3D G3DSA:3.30.1150.10 107 218 3.7E-13 T 23-04-2016 CYCME_RS00790 6d86ab633655f3215588971c03776b4d 221 PANTHER PTHR33446 18 205 6.3E-12 T 23-04-2016 CYCME_RS00790 6d86ab633655f3215588971c03776b4d 221 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 218 1.3E-18 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 Pfam PF00270 DEAD/DEAH box helicase 32 195 5.7E-49 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 SMART SM00490 260 341 4.7E-32 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 Gene3D G3DSA:3.40.50.300 214 379 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 PANTHER PTHR24031:SF261 9 449 7.1E-227 T 23-04-2016 CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 Pfam PF03880 DbpA RNA binding domain 490 560 2.8E-21 T 23-04-2016 IPR005580 DbpA, RNA-binding domain CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 PANTHER PTHR24031 9 449 7.1E-227 T 23-04-2016 CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 561 45.28 T 23-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 Gene3D G3DSA:3.40.50.300 4 213 1.1E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 Pfam PF00271 Helicase conserved C-terminal domain 233 341 1.1E-27 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 SMART SM00487 26 224 3.9E-65 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS04750 d84a7888fd14b6f7422f00155f29bda0 594 SUPERFAMILY SSF52540 75 362 1.25E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 PANTHER PTHR24095 3 538 5.2E-188 T 23-04-2016 CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 SUPERFAMILY SSF56801 8 537 3.66E-144 T 23-04-2016 CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 Gene3D G3DSA:2.30.38.10 358 433 3.1E-22 T 23-04-2016 CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 529 7.9E-21 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 Gene3D G3DSA:3.40.50.980 197 357 4.2E-29 T 23-04-2016 CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 PANTHER PTHR24095:SF180 3 538 5.2E-188 T 23-04-2016 CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 Gene3D G3DSA:3.30.300.30 437 537 7.9E-30 T 23-04-2016 CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 Pfam PF00501 AMP-binding enzyme 33 442 2.9E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS04495 89581b2cf57372c67414da17135aefc4 539 Gene3D G3DSA:3.40.50.980 35 196 1.1E-30 T 23-04-2016 CYCME_RS04555 1aaa80dfcb3b9e527f0c3d34933db081 434 PANTHER PTHR11564:SF3 124 408 6.0E-75 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CYCME_RS04555 1aaa80dfcb3b9e527f0c3d34933db081 434 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 304 6.5E-79 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CYCME_RS04555 1aaa80dfcb3b9e527f0c3d34933db081 434 Gene3D G3DSA:3.40.50.300 217 404 2.9E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04555 1aaa80dfcb3b9e527f0c3d34933db081 434 PANTHER PTHR11564 124 408 6.0E-75 T 23-04-2016 CYCME_RS04555 1aaa80dfcb3b9e527f0c3d34933db081 434 SMART SM00962 216 408 6.0E-50 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS04555 1aaa80dfcb3b9e527f0c3d34933db081 434 Pfam PF00448 SRP54-type protein, GTPase domain 219 404 4.1E-36 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS04555 1aaa80dfcb3b9e527f0c3d34933db081 434 SUPERFAMILY SSF52540 212 406 2.11E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04555 1aaa80dfcb3b9e527f0c3d34933db081 434 SMART SM00382 215 367 9.2E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09720 125514c2ea2de27d5d2f13bbc13da2b5 83 Pfam PF02416 mttA/Hcf106 family 4 40 1.6E-7 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CYCME_RS09720 125514c2ea2de27d5d2f13bbc13da2b5 83 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 76 1.8E-23 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CYCME_RS09720 125514c2ea2de27d5d2f13bbc13da2b5 83 PANTHER PTHR33162 1 66 1.1E-19 T 23-04-2016 CYCME_RS09720 125514c2ea2de27d5d2f13bbc13da2b5 83 PANTHER PTHR33162:SF4 1 66 1.1E-19 T 23-04-2016 CYCME_RS09720 125514c2ea2de27d5d2f13bbc13da2b5 83 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.1E-20 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CYCME_RS09720 125514c2ea2de27d5d2f13bbc13da2b5 83 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.1E-20 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CYCME_RS09720 125514c2ea2de27d5d2f13bbc13da2b5 83 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.1E-20 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CYCME_RS08630 28ad7c3870ccd2c081e242201d30983a 581 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 225 249 1.1E-8 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CYCME_RS08630 28ad7c3870ccd2c081e242201d30983a 581 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 1.1E-8 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CYCME_RS08630 28ad7c3870ccd2c081e242201d30983a 581 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 304 323 1.1E-8 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CYCME_RS08630 28ad7c3870ccd2c081e242201d30983a 581 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 356 382 1.1E-8 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CYCME_RS08630 28ad7c3870ccd2c081e242201d30983a 581 PANTHER PTHR22773:SF80 20 523 8.0E-190 T 23-04-2016 CYCME_RS08630 28ad7c3870ccd2c081e242201d30983a 581 PANTHER PTHR22773 20 523 8.0E-190 T 23-04-2016 CYCME_RS08630 28ad7c3870ccd2c081e242201d30983a 581 Pfam PF00361 Proton-conducting membrane transporter 127 396 3.8E-45 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CYCME_RS11810 56071e374ff6c7699a83cd00db21d20f 414 Pfam PF07396 Phosphate-selective porin O and P 100 406 6.7E-8 T 23-04-2016 IPR010870 Phosphate-selective porin O/P CYCME_RS11810 56071e374ff6c7699a83cd00db21d20f 414 SUPERFAMILY SSF56935 89 414 2.72E-41 T 23-04-2016 CYCME_RS11810 56071e374ff6c7699a83cd00db21d20f 414 Gene3D G3DSA:2.40.160.10 84 403 2.1E-19 T 23-04-2016 IPR023614 Porin domain CYCME_RS01315 9bb34203b72f7ae511421364bad89b34 282 SUPERFAMILY SSF51730 9 279 1.49E-96 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CYCME_RS01315 9bb34203b72f7ae511421364bad89b34 282 PANTHER PTHR21091:SF31 136 271 4.4E-43 T 23-04-2016 CYCME_RS01315 9bb34203b72f7ae511421364bad89b34 282 Gene3D G3DSA:3.20.20.220 8 280 7.3E-107 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CYCME_RS01315 9bb34203b72f7ae511421364bad89b34 282 Pfam PF02219 Methylenetetrahydrofolate reductase 7 278 3.7E-91 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CYCME_RS01315 9bb34203b72f7ae511421364bad89b34 282 PANTHER PTHR21091 136 271 4.4E-43 T 23-04-2016 CYCME_RS01315 9bb34203b72f7ae511421364bad89b34 282 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 9 277 1.8E-101 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CYCME_RS10755 fbbb85c2e8568e345405fabe8448819e 157 SUPERFAMILY SSF52833 5 155 3.03E-50 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS10755 fbbb85c2e8568e345405fabe8448819e 157 PIRSF PIRSF000239 1 157 9.0E-28 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 CYCME_RS10755 fbbb85c2e8568e345405fabe8448819e 157 Pfam PF00578 AhpC/TSA family 7 134 9.2E-33 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CYCME_RS10755 fbbb85c2e8568e345405fabe8448819e 157 PANTHER PTHR10681 4 155 1.4E-44 T 23-04-2016 CYCME_RS10755 fbbb85c2e8568e345405fabe8448819e 157 Gene3D G3DSA:3.40.30.10 4 156 1.9E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS05650 8255e322ae5cae025fb4b50a9c505d6a 169 PANTHER PTHR41534 3 169 8.5E-22 T 23-04-2016 CYCME_RS05650 8255e322ae5cae025fb4b50a9c505d6a 169 PANTHER PTHR41534:SF1 3 169 8.5E-22 T 23-04-2016 CYCME_RS05650 8255e322ae5cae025fb4b50a9c505d6a 169 Gene3D G3DSA:3.10.450.50 7 168 9.7E-40 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS05650 8255e322ae5cae025fb4b50a9c505d6a 169 Pfam PF00866 Ring hydroxylating beta subunit 21 157 3.1E-22 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS05650 8255e322ae5cae025fb4b50a9c505d6a 169 SUPERFAMILY SSF54427 10 165 3.32E-36 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 SUPERFAMILY SSF51735 159 332 4.99E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 120 7.7E-25 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 Gene3D G3DSA:3.40.50.720 190 309 9.0E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 PANTHER PTHR11695 127 365 3.1E-116 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 PANTHER PTHR11695 15 106 3.1E-116 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 SMART SM00829 10 364 0.002 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 SUPERFAMILY SSF50129 2 192 1.67E-55 T 23-04-2016 IPR011032 GroES-like CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 PANTHER PTHR11695:SF571 127 365 3.1E-116 T 23-04-2016 CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 PANTHER PTHR11695:SF571 15 106 3.1E-116 T 23-04-2016 CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 Gene3D G3DSA:3.90.180.10 2 189 8.2E-52 T 23-04-2016 IPR011032 GroES-like CYCME_RS02660 207aebc240728cdbd8b51a53f7ba0b01 368 Pfam PF00107 Zinc-binding dehydrogenase 197 322 1.3E-24 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 1.6E-16 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 SUPERFAMILY SSF54292 1 88 1.17E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 Gene3D G3DSA:2.40.30.10 105 201 1.8E-23 T 23-04-2016 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 SUPERFAMILY SSF52343 188 333 1.57E-32 T 23-04-2016 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 SUPERFAMILY SSF63380 105 201 1.19E-22 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 7.4E-26 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 235 244 7.4E-26 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 210 229 7.4E-26 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 133 145 7.4E-26 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 150 157 7.4E-26 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 PRINTS PR00410 Phenol hydroxylase reductase family signature 194 203 7.4E-26 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 Pfam PF00175 Oxidoreductase NAD-binding domain 212 315 3.3E-13 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 PANTHER PTHR19370:SF32 27 354 5.9E-70 T 23-04-2016 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 PANTHER PTHR19370 27 354 5.9E-70 T 23-04-2016 CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 Gene3D G3DSA:3.10.20.30 2 94 9.0E-28 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 Pfam PF00970 Oxidoreductase FAD-binding domain 111 199 3.5E-10 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CYCME_RS10250 b1506e2fbbd295541bbd1df4f4ee7ed9 354 Gene3D G3DSA:3.40.50.80 204 336 3.4E-32 T 23-04-2016 CYCME_RS11515 5fc9626b23f296dc4a7ee667e589dff8 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 242 2.5E-63 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CYCME_RS11515 5fc9626b23f296dc4a7ee667e589dff8 244 PANTHER PTHR30616 1 244 1.8E-114 T 23-04-2016 CYCME_RS11515 5fc9626b23f296dc4a7ee667e589dff8 244 Gene3D G3DSA:3.60.140.10 2 243 1.1E-93 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CYCME_RS11515 5fc9626b23f296dc4a7ee667e589dff8 244 SUPERFAMILY SSF64438 3 242 2.38E-81 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic CYCME_RS11515 5fc9626b23f296dc4a7ee667e589dff8 244 PANTHER PTHR30616:SF3 1 244 1.8E-114 T 23-04-2016 CYCME_RS11515 5fc9626b23f296dc4a7ee667e589dff8 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 241 3.8E-75 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 2.1E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 2.1E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 150 162 2.1E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 191 5.8E-69 T 23-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 PANTHER PTHR10134:SF8 1 195 5.4E-94 T 23-04-2016 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 Pfam PF00355 Rieske [2Fe-2S] domain 109 176 1.6E-10 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 SUPERFAMILY SSF50022 30 190 8.27E-43 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 PANTHER PTHR10134 1 195 5.4E-94 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 Gene3D G3DSA:2.102.10.10 45 192 1.3E-33 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 4.9E-14 T 23-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CYCME_RS04070 76e7566c2146e7d64f372f8286e75a2d 197 Gene3D G3DSA:1.20.5.510 7 40 2.1E-8 T 23-04-2016 CYCME_RS09385 0a53b5953f8e76751cca3843da01cb8d 314 PANTHER PTHR30087:SF0 2 314 2.5E-132 T 23-04-2016 CYCME_RS09385 0a53b5953f8e76751cca3843da01cb8d 314 Pfam PF04463 Protein of unknown function (DUF523) 5 145 1.0E-35 T 23-04-2016 IPR007553 Domain of unknown function DUF523 CYCME_RS09385 0a53b5953f8e76751cca3843da01cb8d 314 PIRSF PIRSF037004 1 314 3.2E-127 T 23-04-2016 IPR017087 Uncharacterised conserved protein UCP037004 CYCME_RS09385 0a53b5953f8e76751cca3843da01cb8d 314 Pfam PF08349 Protein of unknown function (DUF1722) 189 305 4.2E-43 T 23-04-2016 IPR013560 Domain of unknown function DUF1722 CYCME_RS09385 0a53b5953f8e76751cca3843da01cb8d 314 PANTHER PTHR30087 2 314 2.5E-132 T 23-04-2016 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 PANTHER PTHR32071 206 555 3.7E-137 T 23-04-2016 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 Pfam PF06505 Activator of aromatic catabolism 14 114 4.9E-37 T 23-04-2016 IPR010523 Activator of aromatic catabolism CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 320 335 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 14 133 1.0E-31 T 23-04-2016 IPR010523 Activator of aromatic catabolism CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 447 456 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 SUPERFAMILY SSF52540 233 477 5.73E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 Gene3D G3DSA:1.10.10.60 516 555 1.7E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 SMART SM00989 125 187 3.6E-18 T 23-04-2016 IPR004096 4-vinyl reductase, 4VR CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 541 561 2.0E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 524 541 2.0E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 Pfam PF02954 Bacterial regulatory protein, Fis family 520 557 3.6E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 Pfam PF00158 Sigma-54 interaction domain 234 400 3.3E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 258 271 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 SUPERFAMILY SSF111126 28 183 4.71E-11 T 23-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 Pfam PF02830 V4R domain 126 187 6.6E-14 T 23-04-2016 IPR004096 4-vinyl reductase, 4VR CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 SMART SM00382 254 397 6.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 Gene3D G3DSA:3.30.1380.20 24 192 5.1E-18 T 23-04-2016 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 SUPERFAMILY SSF46689 447 557 1.03E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 Gene3D G3DSA:3.40.50.300 230 406 4.8E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10350 a3dda5e2106e5d9f6c8e83cb46b668b0 563 Gene3D G3DSA:1.10.8.60 407 480 5.7E-23 T 23-04-2016 CYCME_RS12465 f93c760b04d584fe8b4da3c427e63d00 423 SUPERFAMILY SSF110296 363 385 1.31E-28 T 23-04-2016 CYCME_RS12465 f93c760b04d584fe8b4da3c427e63d00 423 SUPERFAMILY SSF110296 31 218 1.31E-28 T 23-04-2016 CYCME_RS12465 f93c760b04d584fe8b4da3c427e63d00 423 Gene3D G3DSA:2.130.10.10 51 217 1.2E-18 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS12465 f93c760b04d584fe8b4da3c427e63d00 423 Gene3D G3DSA:2.130.10.10 367 389 1.2E-18 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS12465 f93c760b04d584fe8b4da3c427e63d00 423 Pfam PF14870 Photosynthesis system II assembly factor YCF48 77 253 6.1E-20 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 1.3E-40 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 PANTHER PTHR30525 1 390 3.0E-208 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 Gene3D G3DSA:3.40.50.720 1 151 1.9E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 Gene3D G3DSA:1.10.1740.10 308 390 3.3E-30 T 23-04-2016 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 SUPERFAMILY SSF69055 299 390 1.44E-29 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 388 46.42 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 133 8.0E-43 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 SUPERFAMILY SSF55347 127 270 2.32E-60 T 23-04-2016 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 PIRSF PIRSF006205 1 392 7.7E-153 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 SUPERFAMILY SSF51735 2 151 9.2E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 387 6.8E-152 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS07675 2f38820db694ba041b87e4f1d394ccda 392 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 235 8.3E-38 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 Gene3D G3DSA:3.40.50.1440 14 214 1.8E-92 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.6E-37 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 SUPERFAMILY SSF52490 13 208 1.01E-70 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 1.5E-40 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 SUPERFAMILY SSF55307 204 319 5.72E-43 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 PANTHER PTHR30314 1 386 2.2E-198 T 23-04-2016 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 SMART SM00864 13 205 4.4E-118 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 Gene3D G3DSA:3.30.1330.20 215 319 7.3E-47 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 SMART SM00865 207 325 6.0E-58 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 PANTHER PTHR30314:SF3 1 386 2.2E-198 T 23-04-2016 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 367 38.094 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 328 1.3E-132 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 PRINTS PR00423 Cell division protein FtsZ signature 189 211 3.6E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 PRINTS PR00423 Cell division protein FtsZ signature 98 118 3.6E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 PRINTS PR00423 Cell division protein FtsZ signature 126 147 3.6E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CYCME_RS11090 45c75703aacb6ec34322441d56a9adcd 388 PRINTS PR00423 Cell division protein FtsZ signature 212 233 3.6E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CYCME_RS08900 e3beb669b69d6511a3be2569cee4139f 444 PANTHER PTHR30213:SF0 7 366 8.8E-74 T 23-04-2016 CYCME_RS08900 e3beb669b69d6511a3be2569cee4139f 444 Gene3D G3DSA:1.10.10.10 318 442 1.4E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08900 e3beb669b69d6511a3be2569cee4139f 444 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 46 294 7.5E-40 T 23-04-2016 IPR017039 Virulence factor BrkB CYCME_RS08900 e3beb669b69d6511a3be2569cee4139f 444 Pfam PF03631 Virulence factor BrkB 47 297 8.0E-51 T 23-04-2016 IPR017039 Virulence factor BrkB CYCME_RS08900 e3beb669b69d6511a3be2569cee4139f 444 PANTHER PTHR30213 7 366 8.8E-74 T 23-04-2016 CYCME_RS09835 0f17dd69a802540c26e6c8cd56fb24d1 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 56 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CYCME_RS09835 0f17dd69a802540c26e6c8cd56fb24d1 210 Gene3D G3DSA:1.10.357.10 4 162 2.0E-29 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CYCME_RS09835 0f17dd69a802540c26e6c8cd56fb24d1 210 PANTHER PTHR30055:SF27 1 118 3.7E-19 T 23-04-2016 CYCME_RS09835 0f17dd69a802540c26e6c8cd56fb24d1 210 PANTHER PTHR30055 1 118 3.7E-19 T 23-04-2016 CYCME_RS09835 0f17dd69a802540c26e6c8cd56fb24d1 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 2.1E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS09835 0f17dd69a802540c26e6c8cd56fb24d1 210 SUPERFAMILY SSF46689 6 86 5.49E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS09835 0f17dd69a802540c26e6c8cd56fb24d1 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.2E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS09835 0f17dd69a802540c26e6c8cd56fb24d1 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.2E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS03745 e5731030d11e81b06dc4cb8148c13d73 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 19.341 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03745 e5731030d11e81b06dc4cb8148c13d73 61 Pfam PF00327 Ribosomal protein L30p/L7e 6 54 1.5E-16 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CYCME_RS03745 e5731030d11e81b06dc4cb8148c13d73 61 Gene3D G3DSA:3.30.1390.20 4 60 9.8E-26 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CYCME_RS03745 e5731030d11e81b06dc4cb8148c13d73 61 SUPERFAMILY SSF55129 4 61 2.88E-18 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CYCME_RS03745 e5731030d11e81b06dc4cb8148c13d73 61 PIRSF PIRSF002211 1 61 1.3E-22 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03745 e5731030d11e81b06dc4cb8148c13d73 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 60 1.3E-18 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03745 e5731030d11e81b06dc4cb8148c13d73 61 PANTHER PTHR15892 4 61 8.6E-23 T 23-04-2016 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 89 2.0E-42 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 PIRSF PIRSF002144 1 90 2.9E-30 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 SUPERFAMILY SSF54570 3 83 3.66E-34 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.0E-21 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.0E-21 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.0E-21 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.148 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 Gene3D G3DSA:3.30.860.10 2 88 1.1E-38 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 PANTHER PTHR11880 2 83 2.5E-48 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03675 10bb0603144fb4acdc36e4b635810c66 90 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-35 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 Pfam PF01061 ABC-2 type transporter 16 224 4.5E-27 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PIRSF PIRSF006648 2 259 3.5E-30 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PANTHER PTHR30413:SF7 16 260 2.1E-67 T 23-04-2016 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 2.1E-41 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 2.1E-41 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 145 169 2.1E-41 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 63 85 2.1E-41 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 2.1E-41 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 2.1E-41 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 PANTHER PTHR30413 16 260 2.1E-67 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS05340 8d5817e04d47498c6acde67187233357 260 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 16 258 2.5E-68 T 23-04-2016 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 CYCME_RS11055 73d2d917dbc49921379933518dc7e28b 62 PANTHER PTHR36150 1 57 8.2E-20 T 23-04-2016 CYCME_RS11055 73d2d917dbc49921379933518dc7e28b 62 Pfam PF03884 Domain of unknown function (DUF329) 6 56 7.5E-25 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CYCME_RS11055 73d2d917dbc49921379933518dc7e28b 62 PANTHER PTHR36150:SF1 1 57 8.2E-20 T 23-04-2016 CYCME_RS11055 73d2d917dbc49921379933518dc7e28b 62 SUPERFAMILY SSF57716 3 56 1.71E-20 T 23-04-2016 CYCME_RS11055 73d2d917dbc49921379933518dc7e28b 62 Gene3D G3DSA:3.30.50.10 2 58 1.7E-25 T 23-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CYCME_RS11055 73d2d917dbc49921379933518dc7e28b 62 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 2 59 19.184 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 Pfam PF07499 RuvA, C-terminal domain 153 195 1.7E-12 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 PANTHER PTHR33796 2 199 4.9E-78 T 23-04-2016 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 Pfam PF14520 Helix-hairpin-helix domain 72 130 7.4E-15 T 23-04-2016 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 SUPERFAMILY SSF47781 65 133 1.07E-19 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 196 5.8E-56 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 SMART SM00278 108 127 0.36 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 SMART SM00278 73 92 3.6 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 SUPERFAMILY SSF50249 1 63 1.2E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 SUPERFAMILY SSF46929 152 194 6.28E-10 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 Gene3D G3DSA:2.40.50.140 1 65 8.7E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 197 30.907 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 Pfam PF01330 RuvA N terminal domain 1 62 4.8E-21 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 Gene3D G3DSA:1.10.8.10 152 195 1.1E-17 T 23-04-2016 CYCME_RS10570 349f253e0aff96cb8db1ab5e5eaaa1bd 199 Gene3D G3DSA:1.10.150.20 67 134 6.2E-27 T 23-04-2016 CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 56 413 5.8E-54 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 PANTHER PTHR11999 113 480 9.1E-75 T 23-04-2016 CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 352 367 5.0E-5 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 112 131 5.0E-5 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 49 68 5.0E-5 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 395 414 5.0E-5 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 SUPERFAMILY SSF53383 30 477 1.38E-92 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 Gene3D G3DSA:3.90.1150.10 368 478 3.7E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS04145 28cb83e8879292de563034d5b7a0891e 480 Gene3D G3DSA:3.40.640.10 108 367 3.0E-71 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS04875 e935911d08065782ffc8153025a2fffd 102 PANTHER PTHR37483 1 102 9.4E-36 T 23-04-2016 CYCME_RS04875 e935911d08065782ffc8153025a2fffd 102 Hamap MF_00460 Protein RnfH [rnfH]. 2 92 23.553 T 23-04-2016 IPR005346 RnfH protein CYCME_RS04875 e935911d08065782ffc8153025a2fffd 102 Gene3D G3DSA:3.10.20.280 3 86 3.8E-34 T 23-04-2016 IPR005346 RnfH protein CYCME_RS04875 e935911d08065782ffc8153025a2fffd 102 PANTHER PTHR37483:SF1 1 102 9.4E-36 T 23-04-2016 CYCME_RS04875 e935911d08065782ffc8153025a2fffd 102 SUPERFAMILY SSF54285 3 76 1.31E-24 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CYCME_RS04875 e935911d08065782ffc8153025a2fffd 102 Pfam PF03658 RnfH family Ubiquitin 3 84 1.8E-33 T 23-04-2016 IPR005346 RnfH protein CYCME_RS08765 a1141d16ad6958ff1b6ddd7e20357f61 415 PANTHER PTHR30097 44 415 1.1E-53 T 23-04-2016 CYCME_RS08765 a1141d16ad6958ff1b6ddd7e20357f61 415 Pfam PF13533 Biotin-lipoyl like 189 223 1.3E-5 T 23-04-2016 CYCME_RS08765 a1141d16ad6958ff1b6ddd7e20357f61 415 Pfam PF13437 HlyD family secretion protein 230 327 7.6E-13 T 23-04-2016 CYCME_RS08765 a1141d16ad6958ff1b6ddd7e20357f61 415 Gene3D G3DSA:2.40.50.100 189 256 2.1E-11 T 23-04-2016 CYCME_RS08765 a1141d16ad6958ff1b6ddd7e20357f61 415 SUPERFAMILY SSF111369 177 333 3.27E-8 T 23-04-2016 CYCME_RS08765 a1141d16ad6958ff1b6ddd7e20357f61 415 PANTHER PTHR30097:SF4 44 415 1.1E-53 T 23-04-2016 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 Gene3D G3DSA:1.10.510.10 370 528 1.7E-36 T 23-04-2016 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 SMART SM00331 19 239 1.6E-9 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 PANTHER PTHR24362:SF160 269 533 5.8E-62 T 23-04-2016 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 Gene3D G3DSA:3.60.40.10 5 239 1.5E-44 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 PANTHER PTHR24362 269 533 5.8E-62 T 23-04-2016 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 SUPERFAMILY SSF56112 249 534 4.05E-59 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 SUPERFAMILY SSF81606 6 240 1.44E-47 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 SMART SM00332 2 237 8.2E-21 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 Pfam PF13672 Protein phosphatase 2C 19 207 2.0E-12 T 23-04-2016 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 391 403 - T 23-04-2016 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 Gene3D G3DSA:3.30.200.20 266 369 1.1E-14 T 23-04-2016 CYCME_RS08615 e22c566ae2c96e464ed621760a614ba9 573 Pfam PF00069 Protein kinase domain 276 523 8.0E-40 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 1.2E-63 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 2.8E-35 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.8E-35 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 2.8E-35 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 2.8E-35 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 2.8E-35 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 1.1E-59 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 Gene3D G3DSA:3.30.420.10 1 155 4.7E-66 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 SUPERFAMILY SSF53098 1 153 4.17E-55 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 45.781 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CYCME_RS10575 18e5772da83ef62c34dd6a2e65ac33cb 164 PANTHER PTHR30194 1 151 2.4E-65 T 23-04-2016 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 SUPERFAMILY SSF82866 578 775 9.29E-28 T 23-04-2016 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 Pfam PF03176 MMPL family 49 325 1.5E-11 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 Pfam PF03176 MMPL family 548 768 4.2E-13 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 PANTHER PTHR33406:SF2 125 766 3.7E-49 T 23-04-2016 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 PANTHER PTHR33406:SF2 1 100 3.7E-49 T 23-04-2016 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 SUPERFAMILY SSF82866 167 381 2.49E-29 T 23-04-2016 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 Gene3D G3DSA:1.20.1640.10 188 384 1.3E-25 T 23-04-2016 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 Gene3D G3DSA:1.20.1640.10 581 777 5.4E-26 T 23-04-2016 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 PANTHER PTHR33406 125 766 3.7E-49 T 23-04-2016 CYCME_RS10325 209b0f89e25d9a47c6fc3b209343f5bc 779 PANTHER PTHR33406 1 100 3.7E-49 T 23-04-2016 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 Gene3D G3DSA:3.40.190.10 91 177 2.7E-32 T 23-04-2016 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 SUPERFAMILY SSF53850 93 276 1.41E-60 T 23-04-2016 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 PANTHER PTHR21022 4 356 7.2E-122 T 23-04-2016 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 TIGRFAM TIGR01807 CM_P2: chorismate mutase 7 82 5.6E-26 T 23-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 243 265 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 SUPERFAMILY SSF55021 262 357 1.17E-26 T 23-04-2016 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 Gene3D G3DSA:1.20.59.10 4 90 9.5E-22 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 SUPERFAMILY SSF48600 5 96 8.06E-20 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 Pfam PF00800 Prephenate dehydratase 94 269 2.9E-64 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 Gene3D G3DSA:3.30.70.260 272 358 4.2E-29 T 23-04-2016 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 Gene3D G3DSA:3.40.190.10 178 255 8.8E-27 T 23-04-2016 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 Pfam PF01842 ACT domain 282 342 2.4E-7 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 Pfam PF01817 Chorismate mutase type II 11 90 4.9E-21 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 PIRSF PIRSF001500 1 360 7.9E-139 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 PANTHER PTHR21022:SF0 4 356 7.2E-122 T 23-04-2016 CYCME_RS09280 4f2fc6ab1095fd6c7a2b8fd486e7b584 360 SMART SM00830 11 92 4.9E-28 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 Gene3D G3DSA:1.10.8.60 332 440 7.9E-33 T 23-04-2016 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 SMART SM01086 332 431 2.1E-15 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 141 7.7E-7 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 Gene3D G3DSA:1.10.8.10 210 240 2.3E-28 T 23-04-2016 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 Gene3D G3DSA:1.10.8.10 111 174 2.3E-28 T 23-04-2016 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 Gene3D G3DSA:3.40.50.300 242 328 2.9E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 Gene3D G3DSA:3.40.50.300 3 110 2.9E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 Pfam PF07724 AAA domain (Cdc48 subfamily) 169 326 1.8E-40 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 PANTHER PTHR11262 215 440 1.4E-199 T 23-04-2016 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 PANTHER PTHR11262 1 105 1.4E-199 T 23-04-2016 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 440 42.686 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 440 4.1E-206 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 PANTHER PTHR11262:SF3 215 440 1.4E-199 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 PANTHER PTHR11262:SF3 1 105 1.4E-199 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 SUPERFAMILY SSF52540 3 438 1.12E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01785 2e3e671e7eec3a766f255f0f51fb6afe 440 SMART SM00382 49 329 1.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS10390 b3d33fb04ab3b9ddd4a0f2023e116f2a 478 Gene3D G3DSA:3.30.465.10 98 222 2.8E-35 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CYCME_RS10390 b3d33fb04ab3b9ddd4a0f2023e116f2a 478 Gene3D G3DSA:3.40.462.10 226 439 5.6E-34 T 23-04-2016 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain KEGG: 00908+1.5.99.12 CYCME_RS10390 b3d33fb04ab3b9ddd4a0f2023e116f2a 478 SUPERFAMILY SSF55103 227 477 1.11E-10 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CYCME_RS10390 b3d33fb04ab3b9ddd4a0f2023e116f2a 478 SUPERFAMILY SSF56176 2 221 6.54E-34 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CYCME_RS10390 b3d33fb04ab3b9ddd4a0f2023e116f2a 478 Pfam PF01565 FAD binding domain 43 179 1.3E-16 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CYCME_RS10390 b3d33fb04ab3b9ddd4a0f2023e116f2a 478 PANTHER PTHR11748 88 331 7.6E-30 T 23-04-2016 CYCME_RS10390 b3d33fb04ab3b9ddd4a0f2023e116f2a 478 PANTHER PTHR11748:SF35 88 331 7.6E-30 T 23-04-2016 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 424 2.7E-212 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 Gene3D G3DSA:1.10.580.10 54 282 1.1E-96 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 PANTHER PTHR11739 6 430 2.5E-202 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 SUPERFAMILY SSF48256 7 430 5.63E-165 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 PIRSF PIRSF001369 40 430 3.1E-163 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 PRINTS PR00143 Citrate synthase signature 243 271 1.1E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 PRINTS PR00143 Citrate synthase signature 361 377 1.1E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 PRINTS PR00143 Citrate synthase signature 381 395 1.1E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 PRINTS PR00143 Citrate synthase signature 221 236 1.1E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 PRINTS PR00143 Citrate synthase signature 167 180 1.1E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 PRINTS PR00143 Citrate synthase signature 298 318 1.1E-54 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 Gene3D G3DSA:1.10.230.10 283 375 1.5E-42 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain CYCME_RS00270 bbf6468288028798835ec7a0acdcff41 430 Pfam PF00285 Citrate synthase, C-terminal domain 51 413 1.1E-135 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS03890 7da1089d23b545e0b101840090df2eec 506 Pfam PF00795 Carbon-nitrogen hydrolase 223 464 1.8E-26 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS03890 7da1089d23b545e0b101840090df2eec 506 SUPERFAMILY SSF56317 220 479 3.66E-36 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS03890 7da1089d23b545e0b101840090df2eec 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 7 487 22.504 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 CYCME_RS03890 7da1089d23b545e0b101840090df2eec 506 PANTHER PTHR38686 1 503 3.6E-96 T 23-04-2016 CYCME_RS03890 7da1089d23b545e0b101840090df2eec 506 Gene3D G3DSA:3.60.110.10 216 465 2.2E-25 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS03890 7da1089d23b545e0b101840090df2eec 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 60 446 6.8E-97 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 131 1.8E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 46 3.9E-8 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 SUPERFAMILY SSF51161 1 256 9.98E-80 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 Gene3D G3DSA:2.160.10.10 1 188 1.4E-52 T 23-04-2016 CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 42.958 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 254 1.9E-27 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 PANTHER PTHR23416 1 248 1.0E-122 T 23-04-2016 CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 PIRSF PIRSF000456 1 256 5.4E-104 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 PANTHER PTHR23416:SF8 1 248 1.0E-122 T 23-04-2016 CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 2.7E-101 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CYCME_RS07645 4b2b568ba4b9c2672ce4b169264fb8e1 256 Gene3D G3DSA:1.20.1180.10 191 256 1.4E-22 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CYCME_RS10240 da2181435e01f45b69377957de081722 143 SUPERFAMILY SSF143744 4 138 1.02E-38 T 23-04-2016 CYCME_RS10240 da2181435e01f45b69377957de081722 143 Pfam PF03928 Haem-degrading 11 135 1.7E-32 T 23-04-2016 IPR005624 Haem-degrading CYCME_RS10240 da2181435e01f45b69377957de081722 143 PANTHER PTHR34309:SF1 1 138 5.6E-30 T 23-04-2016 CYCME_RS10240 da2181435e01f45b69377957de081722 143 PANTHER PTHR34309 1 138 5.6E-30 T 23-04-2016 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 7 228 36.435 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 SUPERFAMILY SSF53790 5 226 1.07E-77 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 279 1.8E-85 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 Gene3D G3DSA:3.40.1010.10 6 115 3.4E-16 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 Gene3D G3DSA:3.30.950.10 116 229 1.0E-35 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 PANTHER PTHR21091 1 228 1.2E-84 T 23-04-2016 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 PANTHER PTHR21091:SF18 1 228 1.2E-84 T 23-04-2016 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 206 6.0E-27 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CYCME_RS09845 cd6e1be475cd453e53987cb7480c377d 285 PIRSF PIRSF005917 1 284 1.3E-100 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 Pfam PF00072 Response regulator receiver domain 3 113 9.8E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 SUPERFAMILY SSF52172 1 137 6.26E-31 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 Gene3D G3DSA:3.40.50.2300 1 119 3.0E-31 T 23-04-2016 CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 SMART SM00850 146 243 2.6E-25 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 PANTHER PTHR26402 1 126 2.9E-32 T 23-04-2016 CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 PANTHER PTHR26402:SF524 1 126 2.9E-32 T 23-04-2016 CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 SMART SM00448 1 113 5.8E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 Gene3D G3DSA:2.40.50.40 138 203 5.5E-14 T 23-04-2016 CYCME_RS01705 10b71bc49654c46cdf11e511b357bf18 246 Pfam PF04397 LytTr DNA-binding domain 148 242 1.6E-23 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 SUPERFAMILY SSF52540 352 664 8.69E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 SMART SM00843 696 761 8.3E-38 T 23-04-2016 IPR018541 FtsK gamma domain CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 19 193 6.6E-41 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 PANTHER PTHR22683:SF41 241 760 5.0E-267 T 23-04-2016 CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 Pfam PF09397 Ftsk gamma domain 698 758 6.5E-26 T 23-04-2016 IPR018541 FtsK gamma domain CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 SUPERFAMILY SSF46785 696 760 2.72E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 SMART SM00382 414 614 0.001 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 PANTHER PTHR22683 241 760 5.0E-267 T 23-04-2016 CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 Pfam PF01580 FtsK/SpoIIIE family 379 593 1.3E-67 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CYCME_RS07205 2386c5853465c7d0c0ab9bcaac15697d 764 Gene3D G3DSA:3.40.50.300 353 661 1.7E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05490 1474fbf27071ecc61ac82fc58e9b4925 379 PANTHER PTHR11601 6 374 4.8E-109 T 23-04-2016 CYCME_RS05490 1474fbf27071ecc61ac82fc58e9b4925 379 Pfam PF00266 Aminotransferase class-V 16 344 5.3E-56 T 23-04-2016 IPR000192 Aminotransferase class V domain CYCME_RS05490 1474fbf27071ecc61ac82fc58e9b4925 379 Gene3D G3DSA:3.90.1150.10 267 350 7.0E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS05490 1474fbf27071ecc61ac82fc58e9b4925 379 SUPERFAMILY SSF53383 6 375 1.21E-75 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS05490 1474fbf27071ecc61ac82fc58e9b4925 379 Gene3D G3DSA:3.40.640.10 32 266 8.0E-60 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS05490 1474fbf27071ecc61ac82fc58e9b4925 379 PANTHER PTHR11601:SF31 6 374 4.8E-109 T 23-04-2016 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 PANTHER PTHR10174:SF2 63 339 2.5E-86 T 23-04-2016 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 Gene3D G3DSA:3.30.360.10 143 317 2.1E-80 T 23-04-2016 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 335 37.05 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 SMART SM00859 5 120 6.8E-46 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 337 2.2E-135 T 23-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 Gene3D G3DSA:3.40.50.720 2 142 1.1E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 PIRSF PIRSF000148 3 339 1.8E-134 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 321 5.1E-57 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 SUPERFAMILY SSF55347 130 322 2.59E-75 T 23-04-2016 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 PANTHER PTHR10174 63 339 2.5E-86 T 23-04-2016 CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 SUPERFAMILY SSF51735 4 158 1.12E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05260 eb5111d83de2e84a52c76fad012e557b 339 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.2E-32 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 Pfam PF00072 Response regulator receiver domain 6 116 1.2E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 Gene3D G3DSA:1.10.10.60 402 450 1.2E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 SUPERFAMILY SSF46689 351 449 7.62E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 Pfam PF00158 Sigma-54 interaction domain 144 302 3.8E-47 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 SUPERFAMILY SSF52540 144 379 2.79E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 PANTHER PTHR32071:SF17 6 450 2.3E-157 T 23-04-2016 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 SMART SM00382 162 300 5.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 SMART SM00448 4 116 4.2E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 SUPERFAMILY SSF52172 1 187 5.69E-43 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 Gene3D G3DSA:3.40.50.2300 2 129 2.8E-33 T 23-04-2016 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 Pfam PF02954 Bacterial regulatory protein, Fis family 407 445 3.6E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 Gene3D G3DSA:3.40.50.300 140 309 7.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 PRINTS PR00819 CbxX/CfqX superfamily signature 165 180 5.4E-6 T 23-04-2016 IPR000641 CbxX/CfqX GO:0005524 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 PRINTS PR00819 CbxX/CfqX superfamily signature 220 239 5.4E-6 T 23-04-2016 IPR000641 CbxX/CfqX GO:0005524 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 PRINTS PR00819 CbxX/CfqX superfamily signature 353 365 5.4E-6 T 23-04-2016 IPR000641 CbxX/CfqX GO:0005524 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 Gene3D G3DSA:1.10.8.60 310 385 1.3E-19 T 23-04-2016 CYCME_RS01565 bc29dfe1bca829ea6c99137e9a8c27b8 455 PANTHER PTHR32071 6 450 2.3E-157 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 Pfam PF00344 SecY translocase 78 419 6.7E-116 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 Gene3D G3DSA:1.10.3370.10 17 440 3.1E-167 T 23-04-2016 IPR023201 SecY subunit domain CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PANTHER PTHR10906:SF2 17 442 1.0E-219 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 12 436 29.85 T 23-04-2016 IPR026593 Protein translocase subunit SecY CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PANTHER PTHR10906 17 442 1.0E-219 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 ProSitePatterns PS00756 Protein secY signature 2. 176 193 - T 23-04-2016 IPR030659 SecY conserved site CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 SUPERFAMILY SSF103491 16 427 8.11E-132 T 23-04-2016 IPR023201 SecY subunit domain CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 22 432 3.2E-131 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 ProSitePatterns PS00755 Protein secY signature 1. 78 97 - T 23-04-2016 IPR030659 SecY conserved site CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 25 43 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 405 423 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 318 340 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 275 294 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 157 182 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 373 391 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 183 206 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 77 97 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 118 141 7.7E-95 T 23-04-2016 CYCME_RS03755 16198a6ba2f6544d123c4f4e8b0854f5 444 PIRSF PIRSF004557 9 444 1.3E-124 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CYCME_RS03790 5245135e984a6706c923f3703d878f5c 253 PANTHER PTHR30269 1 250 1.2E-58 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CYCME_RS03790 5245135e984a6706c923f3703d878f5c 253 Pfam PF01925 Sulfite exporter TauE/SafE 6 250 2.4E-47 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CYCME_RS03790 5245135e984a6706c923f3703d878f5c 253 PANTHER PTHR30269:SF2 1 250 1.2E-58 T 23-04-2016 CYCME_RS08255 5abc7266b1d097809898a8bc3a30ac5d 156 PANTHER PTHR11079:SF10 1 137 2.6E-27 T 23-04-2016 CYCME_RS08255 5abc7266b1d097809898a8bc3a30ac5d 156 SUPERFAMILY SSF53927 2 138 1.65E-39 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CYCME_RS08255 5abc7266b1d097809898a8bc3a30ac5d 156 PANTHER PTHR11079 1 137 2.6E-27 T 23-04-2016 CYCME_RS08255 5abc7266b1d097809898a8bc3a30ac5d 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CYCME_RS08255 5abc7266b1d097809898a8bc3a30ac5d 156 Gene3D G3DSA:3.40.140.10 2 140 6.3E-31 T 23-04-2016 CYCME_RS08255 5abc7266b1d097809898a8bc3a30ac5d 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 1.5E-16 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 140 256 3.0E-37 T 23-04-2016 IPR014162 Tol-Pal system, YbgF CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 SUPERFAMILY SSF48452 141 249 1.4E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 PANTHER PTHR26312 8 16 2.6E-17 T 23-04-2016 CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 PANTHER PTHR26312 150 262 2.6E-17 T 23-04-2016 CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 Pfam PF13525 Outer membrane lipoprotein 138 261 2.1E-12 T 23-04-2016 CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 PANTHER PTHR26312:SF74 8 16 2.6E-17 T 23-04-2016 CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 PANTHER PTHR26312:SF74 150 262 2.6E-17 T 23-04-2016 CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 Gene3D G3DSA:1.25.40.10 143 249 7.6E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS10530 13bc413fe00c4c42ec5b0b76cade05c9 264 Pfam PF16331 TolA binding protein trimerisation 41 102 1.0E-19 T 23-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 SMART SM00862 145 219 6.3E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 SMART SM00448 2 113 3.7E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 9.0E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 Gene3D G3DSA:3.40.50.2300 1 120 2.2E-36 T 23-04-2016 CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 Gene3D G3DSA:1.10.10.10 126 218 4.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 PANTHER PTHR26402 2 209 9.4E-67 T 23-04-2016 CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 SUPERFAMILY SSF46894 127 219 5.67E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 SUPERFAMILY SSF52172 1 123 8.82E-38 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS04780 9bf19a89c4494c93d9651bf3e133c86d 245 PANTHER PTHR26402:SF50 2 209 9.4E-67 T 23-04-2016 CYCME_RS00885 9f5124af51a5adc1714241c45057545d 228 PANTHER PTHR30050 1 228 1.0E-69 T 23-04-2016 CYCME_RS00885 9f5124af51a5adc1714241c45057545d 228 Pfam PF00308 Bacterial dnaA protein 11 204 3.1E-21 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA CYCME_RS00885 9f5124af51a5adc1714241c45057545d 228 SUPERFAMILY SSF52540 12 204 6.32E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00885 9f5124af51a5adc1714241c45057545d 228 Gene3D G3DSA:3.40.50.300 3 156 3.5E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00885 9f5124af51a5adc1714241c45057545d 228 Gene3D G3DSA:1.10.8.60 160 225 3.0E-25 T 23-04-2016 CYCME_RS00885 9f5124af51a5adc1714241c45057545d 228 PANTHER PTHR30050:SF5 1 228 1.0E-69 T 23-04-2016 CYCME_RS00885 9f5124af51a5adc1714241c45057545d 228 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 4 224 6.4E-75 T 23-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 PANTHER PTHR11695 18 325 2.6E-116 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 Pfam PF00107 Zinc-binding dehydrogenase 152 258 1.3E-32 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 91 1.4E-10 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 SUPERFAMILY SSF51735 112 279 7.44E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 SUPERFAMILY SSF50129 15 145 2.59E-30 T 23-04-2016 IPR011032 GroES-like CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 Gene3D G3DSA:3.40.50.720 146 285 2.3E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 SMART SM00829 13 323 7.9E-19 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 Gene3D G3DSA:3.90.180.10 11 145 1.6E-38 T 23-04-2016 IPR011032 GroES-like CYCME_RS12470 a9c2e74db9a1f44b5deb1d082d8d928b 325 PANTHER PTHR11695:SF605 18 325 2.6E-116 T 23-04-2016 CYCME_RS04425 83d5eea72170c43367c8050ae42a17ba 182 PANTHER PTHR11046 3 181 1.7E-113 T 23-04-2016 CYCME_RS04425 83d5eea72170c43367c8050ae42a17ba 182 PANTHER PTHR11046:SF1 3 181 1.7E-113 T 23-04-2016 CYCME_RS04425 83d5eea72170c43367c8050ae42a17ba 182 SUPERFAMILY SSF53098 4 180 5.31E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS04425 83d5eea72170c43367c8050ae42a17ba 182 SMART SM00479 7 180 6.2E-21 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CYCME_RS04425 83d5eea72170c43367c8050ae42a17ba 182 Pfam PF00929 Exonuclease 9 170 1.7E-33 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CYCME_RS04425 83d5eea72170c43367c8050ae42a17ba 182 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.103 T 23-04-2016 IPR022894 Oligoribonuclease GO:0016788 CYCME_RS04425 83d5eea72170c43367c8050ae42a17ba 182 Gene3D G3DSA:3.30.420.10 4 180 3.4E-71 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS10920 11c81c3457da228f401bd6bfc1d5f55a 130 Gene3D G3DSA:3.40.1260.10 1 128 5.9E-27 T 23-04-2016 IPR027396 DsrEFH-like CYCME_RS10920 11c81c3457da228f401bd6bfc1d5f55a 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 128 2.2E-40 T 23-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CYCME_RS10920 11c81c3457da228f401bd6bfc1d5f55a 130 PANTHER PTHR34874 1 130 1.4E-38 T 23-04-2016 CYCME_RS10920 11c81c3457da228f401bd6bfc1d5f55a 130 Pfam PF02635 DsrE/DsrF-like family 1 128 7.8E-27 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein CYCME_RS10920 11c81c3457da228f401bd6bfc1d5f55a 130 SUPERFAMILY SSF75169 1 128 1.46E-33 T 23-04-2016 IPR027396 DsrEFH-like CYCME_RS10920 11c81c3457da228f401bd6bfc1d5f55a 130 PANTHER PTHR34874:SF1 1 130 1.4E-38 T 23-04-2016 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 2.0E-29 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 PANTHER PTHR11831 1 208 4.6E-89 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 Gene3D G3DSA:1.10.1050.10 1 100 3.1E-46 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 PANTHER PTHR11831:SF4 1 208 4.6E-89 T 23-04-2016 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 Gene3D G3DSA:3.10.290.10 101 199 7.2E-32 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 36.328 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 SMART SM00363 98 162 1.1E-19 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 Pfam PF01479 S4 domain 99 145 2.8E-19 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.0E-81 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 SMART SM01390 3 97 1.5E-56 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CYCME_RS03770 32286bd98383c8c3a9a457023d19d90c 208 SUPERFAMILY SSF55174 2 208 6.15E-73 T 23-04-2016 CYCME_RS11435 92efd8f9589741a9b1fd231ed4432aa4 308 Pfam PF00691 OmpA family 185 283 5.6E-16 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS11435 92efd8f9589741a9b1fd231ed4432aa4 308 PANTHER PTHR30329:SF4 1 69 1.1E-68 T 23-04-2016 CYCME_RS11435 92efd8f9589741a9b1fd231ed4432aa4 308 PANTHER PTHR30329:SF4 98 307 1.1E-68 T 23-04-2016 CYCME_RS11435 92efd8f9589741a9b1fd231ed4432aa4 308 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 9 56 1.6E-19 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain CYCME_RS11435 92efd8f9589741a9b1fd231ed4432aa4 308 Gene3D G3DSA:3.30.1330.60 162 289 7.7E-30 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS11435 92efd8f9589741a9b1fd231ed4432aa4 308 SUPERFAMILY SSF103088 173 289 5.23E-28 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS11435 92efd8f9589741a9b1fd231ed4432aa4 308 PANTHER PTHR30329 1 69 1.1E-68 T 23-04-2016 CYCME_RS11435 92efd8f9589741a9b1fd231ed4432aa4 308 PANTHER PTHR30329 98 307 1.1E-68 T 23-04-2016 CYCME_RS00155 834328e825abc7f6015159232a9a9c71 152 PANTHER PTHR12029:SF31 1 151 4.8E-70 T 23-04-2016 CYCME_RS00155 834328e825abc7f6015159232a9a9c71 152 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.069 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CYCME_RS00155 834328e825abc7f6015159232a9a9c71 152 Pfam PF00588 SpoU rRNA Methylase family 2 142 7.4E-34 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CYCME_RS00155 834328e825abc7f6015159232a9a9c71 152 PANTHER PTHR12029 1 151 4.8E-70 T 23-04-2016 CYCME_RS00155 834328e825abc7f6015159232a9a9c71 152 PIRSF PIRSF029256 1 152 1.4E-63 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CYCME_RS00155 834328e825abc7f6015159232a9a9c71 152 SUPERFAMILY SSF75217 1 150 6.54E-42 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CYCME_RS00155 834328e825abc7f6015159232a9a9c71 152 Gene3D G3DSA:3.40.1280.10 1 151 9.2E-62 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYCME_RS04075 53eda4b7a8b5325b6982ae18edd1a7f8 408 PANTHER PTHR19271:SF9 5 395 4.5E-234 T 23-04-2016 CYCME_RS04075 53eda4b7a8b5325b6982ae18edd1a7f8 408 SUPERFAMILY SSF81648 284 399 7.85E-33 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 CYCME_RS04075 53eda4b7a8b5325b6982ae18edd1a7f8 408 PIRSF PIRSF038885 2 408 1.0E-157 T 23-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 CYCME_RS04075 53eda4b7a8b5325b6982ae18edd1a7f8 408 SUPERFAMILY SSF81342 11 283 2.98E-96 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CYCME_RS04075 53eda4b7a8b5325b6982ae18edd1a7f8 408 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 281 383 1.8E-42 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 CYCME_RS04075 53eda4b7a8b5325b6982ae18edd1a7f8 408 PANTHER PTHR19271 5 395 4.5E-234 T 23-04-2016 CYCME_RS04075 53eda4b7a8b5325b6982ae18edd1a7f8 408 Gene3D G3DSA:1.20.810.10 10 404 2.2E-161 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain CYCME_RS04075 53eda4b7a8b5325b6982ae18edd1a7f8 408 Pfam PF00033 Cytochrome b/b6/petB 28 214 2.0E-66 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CYCME_RS08695 3339d3df25f07b41dc2e1b87ded5351c 113 PANTHER PTHR34535:SF2 2 110 1.6E-34 T 23-04-2016 CYCME_RS08695 3339d3df25f07b41dc2e1b87ded5351c 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 111 4.9E-30 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CYCME_RS08695 3339d3df25f07b41dc2e1b87ded5351c 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 110 7.1E-30 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CYCME_RS08695 3339d3df25f07b41dc2e1b87ded5351c 113 PIRSF PIRSF004761 1 113 2.0E-32 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CYCME_RS08695 3339d3df25f07b41dc2e1b87ded5351c 113 PANTHER PTHR34535 2 110 1.6E-34 T 23-04-2016 CYCME_RS08695 3339d3df25f07b41dc2e1b87ded5351c 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 22.113 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 Pfam PF01593 Flavin containing amine oxidoreductase 433 608 2.3E-17 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 Pfam PF13450 NAD(P)-binding Rossmann-like domain 236 301 2.9E-15 T 23-04-2016 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 PANTHER PTHR10742 3 74 7.7E-62 T 23-04-2016 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 PANTHER PTHR10742 230 681 7.7E-62 T 23-04-2016 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 PANTHER PTHR10742:SF279 3 74 7.7E-62 T 23-04-2016 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 PANTHER PTHR10742:SF279 230 681 7.7E-62 T 23-04-2016 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 SUPERFAMILY SSF51905 644 678 2.72E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 SUPERFAMILY SSF51905 232 541 2.72E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 Gene3D G3DSA:3.50.50.60 232 330 1.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 Gene3D G3DSA:3.50.50.60 429 538 1.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 PRINTS PR00419 Adrenodoxin reductase family signature 233 255 2.7E-8 T 23-04-2016 CYCME_RS07045 ff6d55e635c79b2d432ae7f20d790c2c 717 PRINTS PR00419 Adrenodoxin reductase family signature 256 269 2.7E-8 T 23-04-2016 CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 Pfam PF03023 MviN-like protein 16 452 3.1E-136 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PANTHER PTHR11206:SF90 55 70 1.1E-86 T 23-04-2016 CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PANTHER PTHR11206:SF90 203 430 1.1E-86 T 23-04-2016 CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PANTHER PTHR11206:SF90 456 470 1.1E-86 T 23-04-2016 CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PRINTS PR01806 Virulence factor MviN signature 121 145 4.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PRINTS PR01806 Virulence factor MviN signature 247 273 4.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PRINTS PR01806 Virulence factor MviN signature 397 414 4.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PRINTS PR01806 Virulence factor MviN signature 345 364 4.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PRINTS PR01806 Virulence factor MviN signature 21 40 4.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PRINTS PR01806 Virulence factor MviN signature 40 56 4.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PRINTS PR01806 Virulence factor MviN signature 145 166 4.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PIRSF PIRSF002869 1 497 2.7E-159 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PANTHER PTHR11206 55 70 1.1E-86 T 23-04-2016 CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PANTHER PTHR11206 203 430 1.1E-86 T 23-04-2016 CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 PANTHER PTHR11206 456 470 1.1E-86 T 23-04-2016 CYCME_RS09910 3ca4fe5bf581b0c5a0896ab146373f3f 498 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 489 4.0E-138 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CYCME_RS06575 8ab793a42e79afbb5aafdf33b4298eee 206 PANTHER PTHR11562 10 197 1.9E-32 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS06575 8ab793a42e79afbb5aafdf33b4298eee 206 SUPERFAMILY SSF161111 17 201 8.11E-38 T 23-04-2016 CYCME_RS06575 8ab793a42e79afbb5aafdf33b4298eee 206 Pfam PF01545 Cation efflux family 23 201 1.6E-19 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS06575 8ab793a42e79afbb5aafdf33b4298eee 206 Gene3D G3DSA:1.20.1510.10 19 201 1.8E-30 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CYCME_RS06575 8ab793a42e79afbb5aafdf33b4298eee 206 PANTHER PTHR11562:SF17 10 197 1.9E-32 T 23-04-2016 CYCME_RS06575 8ab793a42e79afbb5aafdf33b4298eee 206 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 20 199 8.7E-27 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376 1177 1262 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376:SF32 1177 1262 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1376 10.431 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 2.6E-19 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 SUPERFAMILY SSF64484 16 944 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 SUPERFAMILY SSF64484 1134 1367 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 SMART SM00663 235 514 4.5E-178 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.4E-73 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 388 4.8E-8 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 2.0E-26 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376:SF32 1303 1387 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376:SF32 571 943 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 7.1E-28 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376:SF32 962 1158 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.8E-85 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376:SF32 4 551 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376 571 943 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376 4 551 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376 1303 1387 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 PANTHER PTHR19376 962 1158 0.0 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Gene3D G3DSA:2.40.40.20 417 489 6.2E-37 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Gene3D G3DSA:2.40.40.20 349 376 6.2E-37 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Gene3D G3DSA:2.40.50.100 1157 1210 8.9E-9 T 23-04-2016 CYCME_RS03625 69543bc63f9fd632d199f306db998b2e 1406 Gene3D G3DSA:2.40.50.100 981 1018 4.2E-5 T 23-04-2016 CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 PANTHER PTHR26402 1 220 2.9E-102 T 23-04-2016 CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 Gene3D G3DSA:1.10.10.10 123 221 3.2E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 PANTHER PTHR26402:SF600 1 220 2.9E-102 T 23-04-2016 CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 SMART SM00448 1 112 3.2E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 SUPERFAMILY SSF52172 1 176 2.57E-38 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 Gene3D G3DSA:3.40.50.2300 1 120 8.1E-36 T 23-04-2016 CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 Pfam PF00072 Response regulator receiver domain 3 112 8.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 SMART SM00862 145 220 5.1E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS06130 aca4c18f2ad52251d2f2c48afd656092 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 5.4E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS08965 923e9b121a2f0183d716279938563bd6 294 SUPERFAMILY SSF55073 139 293 1.02E-46 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS08965 923e9b121a2f0183d716279938563bd6 294 Gene3D G3DSA:3.30.70.270 136 293 1.8E-52 T 23-04-2016 CYCME_RS08965 923e9b121a2f0183d716279938563bd6 294 PANTHER PTHR10799 167 291 3.4E-30 T 23-04-2016 CYCME_RS08965 923e9b121a2f0183d716279938563bd6 294 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 290 1.5E-46 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS08965 923e9b121a2f0183d716279938563bd6 294 PANTHER PTHR10799:SF750 167 291 3.4E-30 T 23-04-2016 CYCME_RS08965 923e9b121a2f0183d716279938563bd6 294 SMART SM00267 123 294 2.6E-57 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS08965 923e9b121a2f0183d716279938563bd6 294 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 293 3.8E-51 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS12345 090c18c7b42f49f41602d769dbff9078 303 Gene3D G3DSA:3.40.50.300 17 181 1.8E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12345 090c18c7b42f49f41602d769dbff9078 303 Gene3D G3DSA:1.10.8.300 197 299 2.1E-26 T 23-04-2016 CYCME_RS12345 090c18c7b42f49f41602d769dbff9078 303 PIRSF PIRSF002849 1 302 6.8E-118 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted CYCME_RS12345 090c18c7b42f49f41602d769dbff9078 303 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 5.6E-61 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CYCME_RS12345 090c18c7b42f49f41602d769dbff9078 303 SUPERFAMILY SSF52540 5 285 5.58E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12345 090c18c7b42f49f41602d769dbff9078 303 PANTHER PTHR11603:SF155 1 287 1.4E-141 T 23-04-2016 CYCME_RS12345 090c18c7b42f49f41602d769dbff9078 303 PANTHER PTHR11603 1 287 1.4E-141 T 23-04-2016 CYCME_RS06310 88d1adfe936248b6382974207ad82625 197 SUPERFAMILY SSF49503 88 196 2.82E-21 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06310 88d1adfe936248b6382974207ad82625 197 Gene3D G3DSA:2.60.40.420 77 195 2.6E-25 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 2.5E-182 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.4E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.4E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.4E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Gene3D G3DSA:3.40.120.10 250 359 1.9E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 4.6E-19 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 SUPERFAMILY SSF53738 155 255 7.95E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 4.8E-45 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 SUPERFAMILY SSF53738 257 364 2.0E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 438 6.5E-16 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 46.104 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 SUPERFAMILY SSF53738 2 180 9.42E-49 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Gene3D G3DSA:3.30.310.50 360 441 1.2E-16 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 7.6E-30 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 PANTHER PTHR22573 3 445 5.1E-159 T 23-04-2016 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Gene3D G3DSA:3.40.120.10 175 249 2.4E-26 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 SUPERFAMILY SSF55957 357 445 2.62E-22 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 PANTHER PTHR22573:SF15 3 445 5.1E-159 T 23-04-2016 CYCME_RS04985 7afcb396b36b09c10bf4a60f01bca887 446 Gene3D G3DSA:3.40.120.10 3 152 3.3E-48 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CYCME_RS10585 f9a17c56c7cc81e7b6099cc52a3401aa 353 SUPERFAMILY SSF51395 1 349 7.33E-118 T 23-04-2016 CYCME_RS10585 f9a17c56c7cc81e7b6099cc52a3401aa 353 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 328 9.9E-81 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CYCME_RS10585 f9a17c56c7cc81e7b6099cc52a3401aa 353 PANTHER PTHR22893:SF14 1 351 1.4E-171 T 23-04-2016 CYCME_RS10585 f9a17c56c7cc81e7b6099cc52a3401aa 353 Gene3D G3DSA:3.20.20.70 2 350 1.1E-126 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS10585 f9a17c56c7cc81e7b6099cc52a3401aa 353 PANTHER PTHR22893 1 351 1.4E-171 T 23-04-2016 CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.2E-75 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 Gene3D G3DSA:3.40.50.300 553 643 6.6E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 Gene3D G3DSA:3.40.50.300 286 387 6.6E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 SUPERFAMILY SSF52540 4 643 8.58E-178 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 Gene3D G3DSA:1.10.486.10 388 542 5.2E-45 T 23-04-2016 CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 PANTHER PTHR11070:SF7 6 721 3.7E-241 T 23-04-2016 CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 Gene3D G3DSA:1.10.10.160 114 190 5.6E-23 T 23-04-2016 IPR013986 DExx box DNA helicase domain CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 Pfam PF13361 UvrD-like helicase C-terminal domain 277 617 8.3E-73 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 Gene3D G3DSA:3.40.50.300 191 285 1.8E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 Gene3D G3DSA:3.40.50.300 4 110 1.8E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00960 b341f3d33f040195df83930d0cdf2138 721 PANTHER PTHR11070 6 721 3.7E-241 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CYCME_RS12030 56638e78d3f2a092e22f3aca6cbb58c0 429 Gene3D G3DSA:1.10.443.10 271 403 6.5E-14 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS12030 56638e78d3f2a092e22f3aca6cbb58c0 429 Pfam PF00589 Phage integrase family 273 403 8.8E-8 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS12030 56638e78d3f2a092e22f3aca6cbb58c0 429 SUPERFAMILY SSF56349 133 404 6.18E-26 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 707 720 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 838 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 700 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 632 654 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 790 801 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 670 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 756 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 768 779 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PRINTS PR00868 DNA-polymerase family A (pol I) signature 852 865 1.5E-80 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 SMART SM00482 663 869 9.9E-113 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 SMART SM00279 170 205 1.9E-14 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Gene3D G3DSA:1.20.1060.10 520 640 1.1E-36 T 23-04-2016 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Gene3D G3DSA:1.10.150.20 689 795 1.8E-35 T 23-04-2016 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Pfam PF01612 3'-5' exonuclease 308 493 1.2E-38 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 SUPERFAMILY SSF88723 4 167 6.73E-55 T 23-04-2016 IPR029060 PIN domain-like CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PANTHER PTHR10133:SF27 1 904 0.0 T 23-04-2016 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 SUPERFAMILY SSF56672 499 905 3.45E-159 T 23-04-2016 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Gene3D G3DSA:3.30.420.10 306 519 1.7E-86 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 7.9E-55 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Gene3D G3DSA:1.10.150.20 184 243 3.0E-29 T 23-04-2016 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Pfam PF00476 DNA polymerase family A 527 903 6.0E-155 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Gene3D G3DSA:3.30.70.370 641 688 1.1E-67 T 23-04-2016 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Gene3D G3DSA:3.30.70.370 796 905 1.1E-67 T 23-04-2016 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 SMART SM00474 307 494 7.2E-37 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 262 5.9E-32 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 SUPERFAMILY SSF47807 168 282 3.44E-36 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 ProSitePatterns PS00447 DNA polymerase family A signature. 731 750 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 SUPERFAMILY SSF53098 310 495 6.0E-56 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 PANTHER PTHR10133 1 904 0.0 T 23-04-2016 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 Gene3D G3DSA:3.40.50.1010 4 183 4.0E-71 T 23-04-2016 IPR029060 PIN domain-like CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 SMART SM00475 3 258 9.2E-124 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CYCME_RS12140 e7c83f94f795592e8d066448e17a4e45 905 TIGRFAM TIGR00593 pola: DNA polymerase I 6 905 1.6E-298 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 SUPERFAMILY SSF102645 185 397 1.44E-72 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 PANTHER PTHR14359 2 398 4.6E-176 T 23-04-2016 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 Gene3D G3DSA:3.40.50.1950 4 186 1.2E-64 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 Pfam PF02441 Flavoprotein 8 133 2.1E-32 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 367 2.1E-67 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 Gene3D G3DSA:3.40.50.10300 187 400 1.5E-81 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 PANTHER PTHR14359:SF20 2 398 4.6E-176 T 23-04-2016 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 SUPERFAMILY SSF52507 3 182 1.19E-59 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CYCME_RS02580 b0c22e46ce7629d773be807fd21b007d 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 392 1.4E-139 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 CYCME_RS02340 a775f7da73bf89899313b9b1eff008da 187 PANTHER PTHR37528 1 187 3.4E-19 T 23-04-2016 CYCME_RS02340 a775f7da73bf89899313b9b1eff008da 187 SUPERFAMILY SSF101327 6 172 1.7E-32 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 CYCME_RS02340 a775f7da73bf89899313b9b1eff008da 187 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 174 1.1E-31 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 Gene3D G3DSA:3.30.43.10 13 80 4.6E-14 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 PANTHER PTHR21071:SF4 1 300 8.7E-103 T 23-04-2016 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 Gene3D G3DSA:3.30.465.10 86 221 5.8E-35 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 PANTHER PTHR21071 1 300 8.7E-103 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 Gene3D G3DSA:3.90.78.10 222 298 6.9E-32 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 197 294 2.2E-29 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 SUPERFAMILY SSF56176 18 189 9.27E-34 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 SUPERFAMILY SSF56194 195 296 1.7E-35 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 Pfam PF01565 FAD binding domain 34 151 2.3E-15 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 300 81.899 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11110 26df85c59c46d32e1160c091a989035d 300 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 295 2.6E-64 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 209 4.6E-62 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 Gene3D G3DSA:3.40.50.2000 256 394 8.1E-6 T 23-04-2016 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 SUPERFAMILY SSF53756 50 418 1.79E-16 T 23-04-2016 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 PANTHER PTHR23417 189 419 3.4E-114 T 23-04-2016 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 PANTHER PTHR23417 129 139 3.4E-114 T 23-04-2016 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 PANTHER PTHR23417 1 110 3.4E-114 T 23-04-2016 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 PANTHER PTHR23417:SF2 189 419 3.4E-114 T 23-04-2016 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 PANTHER PTHR23417:SF2 129 139 3.4E-114 T 23-04-2016 CYCME_RS00915 7b4bf52af2f8e8bd76055bf5a1bb6a43 423 PANTHER PTHR23417:SF2 1 110 3.4E-114 T 23-04-2016 CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 468 709 3.7E-105 T 23-04-2016 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 17 455 1.6E-209 T 23-04-2016 IPR027577 5-histidylcysteine sulfoxide synthase CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 PANTHER PTHR23150:SF24 4 492 4.1E-189 T 23-04-2016 CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 Gene3D G3DSA:3.90.1580.10 192 461 1.8E-51 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 Pfam PF03781 Sulfatase-modifying factor enzyme 1 203 455 5.5E-28 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 Gene3D G3DSA:3.40.50.150 581 660 8.4E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 Gene3D G3DSA:3.40.50.150 474 548 8.4E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 PANTHER PTHR23150 4 492 4.1E-189 T 23-04-2016 CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 SUPERFAMILY SSF56436 201 457 1.32E-56 T 23-04-2016 IPR016187 C-type lectin fold CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 Pfam PF08242 Methyltransferase domain 513 634 1.1E-8 T 23-04-2016 IPR013217 Methyltransferase type 12 CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 SUPERFAMILY SSF53335 480 551 3.88E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS12175 786f6e24a0024bbc1cf304b12874f4cb 714 SUPERFAMILY SSF53335 579 673 3.88E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 SUPERFAMILY SSF54736 53 124 4.88E-24 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.425 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 2.8E-18 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 Gene3D G3DSA:3.30.1390.10 52 124 2.7E-32 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 1.0E-47 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 Gene3D G3DSA:1.20.5.710 2 51 2.9E-22 T 23-04-2016 CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 SUPERFAMILY SSF48300 4 60 1.44E-17 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 3.0E-19 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CYCME_RS03615 815a64bf9cc3590ac9aee8f5af2eed48 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 1.2E-29 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CYCME_RS05015 84ba987419b67d7384a38149a6bb1e39 268 PANTHER PTHR30592 15 266 1.9E-119 T 23-04-2016 CYCME_RS05015 84ba987419b67d7384a38149a6bb1e39 268 PIRSF PIRSF015626 2 267 1.7E-81 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 CYCME_RS05015 84ba987419b67d7384a38149a6bb1e39 268 SUPERFAMILY SSF53927 14 263 2.53E-66 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CYCME_RS05015 84ba987419b67d7384a38149a6bb1e39 268 Gene3D G3DSA:3.40.140.10 129 266 1.7E-51 T 23-04-2016 CYCME_RS05015 84ba987419b67d7384a38149a6bb1e39 268 Pfam PF02634 FdhD/NarQ family 30 262 1.8E-72 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 CYCME_RS05015 84ba987419b67d7384a38149a6bb1e39 268 PANTHER PTHR30592:SF2 15 266 1.9E-119 T 23-04-2016 CYCME_RS05015 84ba987419b67d7384a38149a6bb1e39 268 Gene3D G3DSA:3.10.20.10 32 114 2.0E-12 T 23-04-2016 CYCME_RS09945 3926a976c8e7baeb7e4617e7ea9a6cfb 334 PANTHER PTHR12001 20 334 1.7E-104 T 23-04-2016 IPR017446 Polyprenyl synthetase-related CYCME_RS09945 3926a976c8e7baeb7e4617e7ea9a6cfb 334 PANTHER PTHR12001:SF47 20 334 1.7E-104 T 23-04-2016 CYCME_RS09945 3926a976c8e7baeb7e4617e7ea9a6cfb 334 SUPERFAMILY SSF48576 15 333 2.7E-93 T 23-04-2016 IPR008949 Isoprenoid synthase domain CYCME_RS09945 3926a976c8e7baeb7e4617e7ea9a6cfb 334 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CYCME_RS09945 3926a976c8e7baeb7e4617e7ea9a6cfb 334 Gene3D G3DSA:1.10.600.10 15 333 4.8E-96 T 23-04-2016 IPR008949 Isoprenoid synthase domain CYCME_RS09945 3926a976c8e7baeb7e4617e7ea9a6cfb 334 Pfam PF00348 Polyprenyl synthetase 44 275 9.0E-73 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CYCME_RS09945 3926a976c8e7baeb7e4617e7ea9a6cfb 334 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 107 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 Gene3D G3DSA:3.40.605.10 3 264 5.1E-89 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 PANTHER PTHR11699 1 483 4.4E-217 T 23-04-2016 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 PANTHER PTHR11699:SF213 1 483 4.4E-217 T 23-04-2016 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 Pfam PF00171 Aldehyde dehydrogenase family 20 478 4.4E-164 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 4 483 1.7E-243 T 23-04-2016 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 Gene3D G3DSA:3.40.309.10 265 454 3.4E-68 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CYCME_RS10235 ef80ecabf94275dcdf99ae852e747647 483 SUPERFAMILY SSF53720 3 482 3.01E-162 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 SMART SM00228 102 173 1.1E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 Gene3D G3DSA:3.30.750.44 53 107 1.2E-8 T 23-04-2016 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 Gene3D G3DSA:2.30.42.10 108 184 7.8E-28 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 Pfam PF13180 PDZ domain 102 181 1.1E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 Pfam PF03572 Peptidase family S41 201 366 7.5E-58 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 SUPERFAMILY SSF50156 97 185 2.29E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 SMART SM00245 175 368 5.9E-69 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 SUPERFAMILY SSF52096 33 120 5.47E-81 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 SUPERFAMILY SSF52096 194 371 5.47E-81 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 PANTHER PTHR32060 57 382 4.4E-113 T 23-04-2016 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 57 379 2.3E-101 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 Gene3D G3DSA:3.90.226.10 185 370 3.3E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS00190 7e404ad1628be96c18612ab2f2fe05b5 429 Gene3D G3DSA:3.90.226.10 403 422 3.3E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS01905 c45e576d6b461189ca6af2066b8268ad 412 SUPERFAMILY SSF53756 2 367 2.07E-18 T 23-04-2016 CYCME_RS01905 c45e576d6b461189ca6af2066b8268ad 412 Pfam PF13692 Glycosyl transferases group 1 200 337 1.4E-21 T 23-04-2016 CYCME_RS08585 a32eefa290a985a115fc201b2c00b4d8 304 Gene3D G3DSA:3.10.310.10 1 127 3.9E-31 T 23-04-2016 CYCME_RS08585 a32eefa290a985a115fc201b2c00b4d8 304 SUPERFAMILY SSF54506 1 302 5.23E-43 T 23-04-2016 CYCME_RS08585 a32eefa290a985a115fc201b2c00b4d8 304 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 301 1.1E-49 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CYCME_RS08585 a32eefa290a985a115fc201b2c00b4d8 304 PIRSF PIRSF016184 1 303 7.6E-57 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CYCME_RS08585 a32eefa290a985a115fc201b2c00b4d8 304 Gene3D G3DSA:3.10.310.10 135 292 8.3E-23 T 23-04-2016 CYCME_RS08585 a32eefa290a985a115fc201b2c00b4d8 304 PANTHER PTHR13774 1 303 9.3E-44 T 23-04-2016 CYCME_RS08585 a32eefa290a985a115fc201b2c00b4d8 304 Pfam PF02567 Phenazine biosynthesis-like protein 8 297 2.9E-47 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CYCME_RS04205 8fd26484a6014050164f07e0f2513b44 290 Pfam PF01435 Peptidase family M48 81 288 7.2E-42 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CYCME_RS04205 8fd26484a6014050164f07e0f2513b44 290 Gene3D G3DSA:3.30.2010.10 77 164 1.4E-31 T 23-04-2016 CYCME_RS04205 8fd26484a6014050164f07e0f2513b44 290 Hamap MF_00188 Protease HtpX [htpX]. 1 290 25.485 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CYCME_RS04205 8fd26484a6014050164f07e0f2513b44 290 PANTHER PTHR10120 1 290 8.6E-90 T 23-04-2016 CYCME_RS04205 8fd26484a6014050164f07e0f2513b44 290 PANTHER PTHR10120:SF19 1 290 8.6E-90 T 23-04-2016 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 Gene3D G3DSA:3.30.70.20 116 159 1.3E-15 T 23-04-2016 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 SUPERFAMILY SSF54862 33 169 1.55E-31 T 23-04-2016 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 Gene3D G3DSA:3.30.70.20 42 115 2.5E-7 T 23-04-2016 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 PANTHER PTHR11938 3 171 3.8E-69 T 23-04-2016 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 1 180 38.829 T 23-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 PANTHER PTHR11938:SF64 3 171 3.8E-69 T 23-04-2016 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 176 1.1E-78 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 Pfam PF04060 Putative Fe-S cluster 39 71 6.2E-15 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 Pfam PF14697 4Fe-4S dicluster domain 104 158 7.7E-18 T 23-04-2016 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 PIRSF PIRSF005784 1 181 2.0E-82 T 23-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS00815 a97f04a0fc82731bc2553c37c725586c 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS08520 e3fa283855d648b18202610242266411 318 PANTHER PTHR35271 138 314 2.6E-17 T 23-04-2016 CYCME_RS08520 e3fa283855d648b18202610242266411 318 Gene3D G3DSA:3.40.50.2300 138 260 2.0E-11 T 23-04-2016 CYCME_RS08520 e3fa283855d648b18202610242266411 318 Pfam PF04392 ABC transporter substrate binding protein 140 305 3.8E-10 T 23-04-2016 IPR007487 ABC transporter, substrate-binding protein CYCME_RS11765 8f3ef6edcdd630e2edc81649e99de48f 115 Gene3D G3DSA:2.60.300.12 6 101 1.4E-33 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS11765 8f3ef6edcdd630e2edc81649e99de48f 115 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 110 3.6E-20 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS11765 8f3ef6edcdd630e2edc81649e99de48f 115 SUPERFAMILY SSF89360 10 104 4.12E-31 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS11765 8f3ef6edcdd630e2edc81649e99de48f 115 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 115 35.491 T 23-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 CYCME_RS11765 8f3ef6edcdd630e2edc81649e99de48f 115 PANTHER PTHR10072 6 113 7.2E-45 T 23-04-2016 CYCME_RS11765 8f3ef6edcdd630e2edc81649e99de48f 115 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 96 113 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site CYCME_RS11765 8f3ef6edcdd630e2edc81649e99de48f 115 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 114 3.5E-38 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 CYCME_RS00095 60bf1087c41cc837ff5b0030425c04c7 249 SMART SM00563 82 196 1.2E-30 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CYCME_RS00095 60bf1087c41cc837ff5b0030425c04c7 249 PANTHER PTHR10434 16 244 2.2E-45 T 23-04-2016 CYCME_RS00095 60bf1087c41cc837ff5b0030425c04c7 249 Gene3D G3DSA:3.40.1130.10 75 238 1.8E-23 T 23-04-2016 CYCME_RS00095 60bf1087c41cc837ff5b0030425c04c7 249 Pfam PF01553 Acyltransferase 70 193 7.5E-20 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CYCME_RS00095 60bf1087c41cc837ff5b0030425c04c7 249 SUPERFAMILY SSF69593 16 244 7.06E-42 T 23-04-2016 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 Pfam PF01642 Methylmalonyl-CoA mutase 555 1084 2.3E-140 T 23-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 Gene3D G3DSA:3.40.50.300 206 411 5.1E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 SUPERFAMILY SSF52242 7 154 3.79E-42 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 Pfam PF03308 ArgK protein 178 479 3.1E-42 T 23-04-2016 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 Gene3D G3DSA:3.40.50.280 15 150 2.3E-39 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 Pfam PF02310 B12 binding domain 25 126 3.5E-12 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 SUPERFAMILY SSF51703 516 1086 4.19E-144 T 23-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 PANTHER PTHR23408:SF1 476 699 4.4E-197 T 23-04-2016 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 PANTHER PTHR23408:SF1 722 1090 4.4E-197 T 23-04-2016 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 SUPERFAMILY SSF52540 160 466 2.59E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 Gene3D G3DSA:3.20.20.240 564 1086 9.4E-190 T 23-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 PANTHER PTHR23408 476 699 4.4E-197 T 23-04-2016 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 PANTHER PTHR23408 722 1090 4.4E-197 T 23-04-2016 CYCME_RS04500 26fd1637e736ebb13f54d60999d44a2c 1090 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 22 136 2.5E-18 T 23-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 336 4.9E-166 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 Pfam PF02780 Transketolase, C-terminal domain 544 658 1.2E-16 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 Gene3D G3DSA:3.40.50.970 8 324 8.0E-131 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 SUPERFAMILY SSF52518 343 527 8.46E-67 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 SMART SM00861 358 529 9.4E-66 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 Pfam PF02779 Transketolase, pyrimidine binding domain 357 529 6.7E-46 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 667 5.1E-301 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 Gene3D G3DSA:3.40.50.970 330 537 4.9E-78 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 SUPERFAMILY SSF52518 7 324 2.82E-120 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 PANTHER PTHR11624:SF1 340 667 0.0 T 23-04-2016 CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 PANTHER PTHR11624:SF1 3 313 0.0 T 23-04-2016 CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 Gene3D G3DSA:3.40.50.920 542 667 1.1E-51 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 PANTHER PTHR11624 340 667 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 PANTHER PTHR11624 3 313 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS01835 cd3fad4e2d8297b596e518c4703379e3 667 SUPERFAMILY SSF52922 539 667 4.32E-44 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 SUPERFAMILY SSF52833 3 107 9.89E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 PANTHER PTHR10438 8 108 1.3E-38 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 5.1E-38 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 Pfam PF00085 Thioredoxin 5 106 2.2E-34 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 PRINTS PR00421 Thioredoxin family signature 24 32 1.1E-9 T 23-04-2016 CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 PRINTS PR00421 Thioredoxin family signature 72 83 1.1E-9 T 23-04-2016 CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 PRINTS PR00421 Thioredoxin family signature 32 41 1.1E-9 T 23-04-2016 CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 Gene3D G3DSA:3.40.30.10 2 107 6.5E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02895 826a567628668b85c5f8504bc416c036 108 PIRSF PIRSF000077 2 108 5.6E-44 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CYCME_RS05800 25e61e53d7981c26270afaa79fb0e4b8 282 PANTHER PTHR11941 6 279 5.8E-84 T 23-04-2016 CYCME_RS05800 25e61e53d7981c26270afaa79fb0e4b8 282 Gene3D G3DSA:3.90.226.10 20 280 1.3E-82 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05800 25e61e53d7981c26270afaa79fb0e4b8 282 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 281 1.8E-59 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CYCME_RS05800 25e61e53d7981c26270afaa79fb0e4b8 282 SUPERFAMILY SSF52096 18 282 3.08E-82 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 Gene3D G3DSA:3.40.50.620 227 403 6.6E-59 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 Pfam PF02540 NAD synthase 221 302 1.3E-9 T 23-04-2016 IPR022310 NAD/GMP synthase CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 58 67 2.8E-7 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 85 96 2.8E-7 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 181 194 2.8E-7 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 14 28 8.0E-5 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 55 69 8.0E-5 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 85 101 8.0E-5 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 Gene3D G3DSA:3.30.300.10 405 529 3.6E-51 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 14 209 1.9E-77 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 216 529 2.0E-148 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 SUPERFAMILY SSF52402 201 424 1.46E-58 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PANTHER PTHR11922 1 526 1.3E-282 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 SUPERFAMILY SSF52317 11 241 2.2E-54 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PANTHER PTHR11922:SF2 1 526 1.3E-282 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 Pfam PF00117 Glutamine amidotransferase class-I 16 204 1.4E-38 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 SUPERFAMILY SSF54810 409 529 1.44E-48 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 Pfam PF00958 GMP synthase C terminal domain 438 528 1.5E-41 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 11 529 55.239 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00097 Anthranilate synthase component II signature 85 96 2.6E-6 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00097 Anthranilate synthase component II signature 58 67 2.6E-6 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 PRINTS PR00097 Anthranilate synthase component II signature 181 194 2.6E-6 T 23-04-2016 CYCME_RS09655 7f8fd1df9275d3124432298c53ea64a1 529 Gene3D G3DSA:3.40.50.880 8 226 2.5E-58 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS11930 026f71aef2040762db49f1baa2e3dad1 218 Gene3D G3DSA:3.40.50.150 16 217 2.0E-63 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS11930 026f71aef2040762db49f1baa2e3dad1 218 SUPERFAMILY SSF53335 1 217 3.77E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS11930 026f71aef2040762db49f1baa2e3dad1 218 PANTHER PTHR10259 1 215 5.8E-93 T 23-04-2016 CYCME_RS11930 026f71aef2040762db49f1baa2e3dad1 218 PANTHER PTHR10259:SF16 1 215 5.8E-93 T 23-04-2016 CYCME_RS11930 026f71aef2040762db49f1baa2e3dad1 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 1.1E-87 T 23-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 CYCME_RS11930 026f71aef2040762db49f1baa2e3dad1 218 PIRSF PIRSF023956 1 218 4.1E-81 T 23-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 CYCME_RS11930 026f71aef2040762db49f1baa2e3dad1 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 38.887 T 23-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 CYCME_RS11930 026f71aef2040762db49f1baa2e3dad1 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 218 3.3E-76 T 23-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 Pfam PF02803 Thiolase, C-terminal domain 272 393 9.8E-45 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 Pfam PF00108 Thiolase, N-terminal domain 7 264 1.4E-87 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 SUPERFAMILY SSF53901 6 272 4.01E-83 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 SUPERFAMILY SSF53901 273 394 1.11E-40 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 Gene3D G3DSA:3.40.47.10 6 127 3.0E-66 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 Gene3D G3DSA:3.40.47.10 197 277 3.0E-66 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 PANTHER PTHR18919:SF95 2 395 2.2E-181 T 23-04-2016 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 PANTHER PTHR18919 2 395 2.2E-181 T 23-04-2016 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 393 1.0E-135 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 Gene3D G3DSA:3.40.47.10 147 196 3.6E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 Gene3D G3DSA:3.40.47.10 279 394 3.6E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 PIRSF PIRSF000429 1 395 4.9E-126 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS10850 cc9d8055a9c64b08aa192626da099e2a 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 CYCME_RS03240 02278c43113911be2e5c733f50fc6fc1 647 PANTHER PTHR11365 1 645 1.6E-174 T 23-04-2016 CYCME_RS03240 02278c43113911be2e5c733f50fc6fc1 647 SUPERFAMILY SSF53067 1 70 2.18E-7 T 23-04-2016 CYCME_RS03240 02278c43113911be2e5c733f50fc6fc1 647 SUPERFAMILY SSF53067 245 283 2.18E-7 T 23-04-2016 CYCME_RS03240 02278c43113911be2e5c733f50fc6fc1 647 Pfam PF01968 Hydantoinase/oxoprolinase 191 467 7.1E-93 T 23-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 CYCME_RS03240 02278c43113911be2e5c733f50fc6fc1 647 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 3 169 4.0E-38 T 23-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal CYCME_RS03240 02278c43113911be2e5c733f50fc6fc1 647 PANTHER PTHR11365:SF2 1 645 1.6E-174 T 23-04-2016 CYCME_RS01925 51f12a9be2427d28b205a0a93d2cf40d 197 PANTHER PTHR33452 2 121 3.4E-76 T 23-04-2016 CYCME_RS01925 51f12a9be2427d28b205a0a93d2cf40d 197 PANTHER PTHR33452 160 196 3.4E-76 T 23-04-2016 CYCME_RS01925 51f12a9be2427d28b205a0a93d2cf40d 197 Pfam PF07681 DoxX 23 107 5.9E-20 T 23-04-2016 IPR032808 DoxX family CYCME_RS01925 51f12a9be2427d28b205a0a93d2cf40d 197 PANTHER PTHR33452:SF5 2 121 3.4E-76 T 23-04-2016 CYCME_RS01925 51f12a9be2427d28b205a0a93d2cf40d 197 PANTHER PTHR33452:SF5 160 196 3.4E-76 T 23-04-2016 CYCME_RS10055 19d1ce38358b0de12ed0c7f7c74101b7 399 PANTHER PTHR37480 2 399 1.2E-233 T 23-04-2016 CYCME_RS10055 19d1ce38358b0de12ed0c7f7c74101b7 399 Pfam PF07055 Enoyl reductase FAD binding domain 325 388 2.5E-28 T 23-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS10055 19d1ce38358b0de12ed0c7f7c74101b7 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 394 54.656 T 23-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS10055 19d1ce38358b0de12ed0c7f7c74101b7 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.1E-37 T 23-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS10055 19d1ce38358b0de12ed0c7f7c74101b7 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.1E-112 T 23-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 4.4E-31 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 PIRSF PIRSF006092 1 158 1.8E-52 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 SUPERFAMILY SSF54534 82 157 2.75E-23 T 23-04-2016 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.87 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 3.8E-28 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 3.1E-57 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 Gene3D G3DSA:1.10.287.180 1 75 3.1E-33 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 Gene3D G3DSA:3.10.50.30 81 157 7.7E-30 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 SUPERFAMILY SSF46557 3 78 4.45E-28 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CYCME_RS04960 dbbb61568e5af2f26c0b334107b12f9f 158 PANTHER PTHR30437 1 158 1.1E-64 T 23-04-2016 CYCME_RS02375 c141913f04c5ddb3cb5b66c24526ff05 454 Pfam PF02347 Glycine cleavage system P-protein 3 446 2.3E-123 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 CYCME_RS02375 c141913f04c5ddb3cb5b66c24526ff05 454 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 451 46.26 T 23-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 CYCME_RS02375 c141913f04c5ddb3cb5b66c24526ff05 454 PANTHER PTHR11773 1 448 2.0E-198 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 CYCME_RS02375 c141913f04c5ddb3cb5b66c24526ff05 454 Gene3D G3DSA:3.40.640.10 85 338 3.3E-19 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS02375 c141913f04c5ddb3cb5b66c24526ff05 454 PIRSF PIRSF006815 1 452 6.5E-168 T 23-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 CYCME_RS02375 c141913f04c5ddb3cb5b66c24526ff05 454 PANTHER PTHR11773:SF2 1 448 2.0E-198 T 23-04-2016 CYCME_RS02375 c141913f04c5ddb3cb5b66c24526ff05 454 SUPERFAMILY SSF53383 1 449 7.12E-111 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 Gene3D G3DSA:3.40.50.300 1 212 6.1E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 6.0E-16 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 PANTHER PTHR23359 1 214 1.0E-102 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 Pfam PF00406 Adenylate kinase 5 185 5.6E-54 T 23-04-2016 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 209 3.8E-72 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 SUPERFAMILY SSF52540 1 212 1.38E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 Hamap MF_00235 Adenylate kinase [adk]. 1 214 49.92 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 PRINTS PR00094 Adenylate kinase signature 32 46 2.9E-32 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 PRINTS PR00094 Adenylate kinase signature 81 97 2.9E-32 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 PRINTS PR00094 Adenylate kinase signature 173 187 2.9E-32 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 PRINTS PR00094 Adenylate kinase signature 156 171 2.9E-32 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS05265 cbb8a0949667cfcc8f23ce321ab07678 215 PRINTS PR00094 Adenylate kinase signature 4 17 2.9E-32 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CYCME_RS03660 12135af8929d46434619fb1ddada110d 197 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 9 194 6.6E-71 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CYCME_RS03660 12135af8929d46434619fb1ddada110d 197 Pfam PF00573 Ribosomal protein L4/L1 family 10 195 8.2E-62 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CYCME_RS03660 12135af8929d46434619fb1ddada110d 197 SUPERFAMILY SSF52166 9 196 3.79E-68 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CYCME_RS03660 12135af8929d46434619fb1ddada110d 197 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 1 197 31.45 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CYCME_RS03660 12135af8929d46434619fb1ddada110d 197 Gene3D G3DSA:3.40.1370.10 49 197 4.3E-53 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CYCME_RS03660 12135af8929d46434619fb1ddada110d 197 PANTHER PTHR10746 9 196 5.3E-86 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CYCME_RS04290 488a6bbbff634ff59f85a6eb805fca74 159 Gene3D G3DSA:3.40.50.960 5 157 2.0E-63 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04290 488a6bbbff634ff59f85a6eb805fca74 159 PANTHER PTHR21058 1 159 1.1E-74 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04290 488a6bbbff634ff59f85a6eb805fca74 159 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 153 8.3E-56 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04290 488a6bbbff634ff59f85a6eb805fca74 159 SUPERFAMILY SSF52121 6 156 1.96E-60 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04290 488a6bbbff634ff59f85a6eb805fca74 159 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 9.3E-56 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS04290 488a6bbbff634ff59f85a6eb805fca74 159 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 31.239 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CYCME_RS06065 c3ee49ad4828661565890d47af4a0dd5 141 Pfam PF01575 MaoC like domain 19 111 6.7E-26 T 23-04-2016 IPR002539 MaoC-like domain CYCME_RS06065 c3ee49ad4828661565890d47af4a0dd5 141 SUPERFAMILY SSF54637 7 132 1.45E-31 T 23-04-2016 IPR029069 HotDog domain CYCME_RS06065 c3ee49ad4828661565890d47af4a0dd5 141 PRINTS PR01483 Fatty acid synthase signature 25 47 7.7E-5 T 23-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CYCME_RS06065 c3ee49ad4828661565890d47af4a0dd5 141 PRINTS PR01483 Fatty acid synthase signature 47 68 7.7E-5 T 23-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 CYCME_RS06065 c3ee49ad4828661565890d47af4a0dd5 141 PANTHER PTHR13078 12 124 1.8E-23 T 23-04-2016 CYCME_RS06065 c3ee49ad4828661565890d47af4a0dd5 141 Gene3D G3DSA:3.10.129.10 6 133 8.7E-34 T 23-04-2016 IPR029069 HotDog domain CYCME_RS05935 5b2e9bc963cfbb1989e9f6687cc3e005 599 PANTHER PTHR13943:SF48 40 114 1.1E-151 T 23-04-2016 CYCME_RS05935 5b2e9bc963cfbb1989e9f6687cc3e005 599 PANTHER PTHR13943:SF48 137 582 1.1E-151 T 23-04-2016 CYCME_RS05935 5b2e9bc963cfbb1989e9f6687cc3e005 599 PANTHER PTHR13943 40 114 1.1E-151 T 23-04-2016 CYCME_RS05935 5b2e9bc963cfbb1989e9f6687cc3e005 599 PANTHER PTHR13943 137 582 1.1E-151 T 23-04-2016 CYCME_RS05935 5b2e9bc963cfbb1989e9f6687cc3e005 599 Pfam PF07287 Protein of unknown function (DUF1446) 6 350 2.3E-118 T 23-04-2016 IPR010839 Protein of unknown function DUF1446 CYCME_RS06035 785e1b2822952c6dfd4504a724583a6e 204 Gene3D G3DSA:1.10.357.10 65 202 2.1E-27 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CYCME_RS06035 785e1b2822952c6dfd4504a724583a6e 204 PANTHER PTHR30055 3 198 9.4E-27 T 23-04-2016 CYCME_RS06035 785e1b2822952c6dfd4504a724583a6e 204 SUPERFAMILY SSF48498 91 202 2.54E-14 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CYCME_RS06035 785e1b2822952c6dfd4504a724583a6e 204 SUPERFAMILY SSF46689 12 85 1.7E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS06035 785e1b2822952c6dfd4504a724583a6e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 9.0E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS06035 785e1b2822952c6dfd4504a724583a6e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 9.0E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS06035 785e1b2822952c6dfd4504a724583a6e 204 Gene3D G3DSA:1.10.10.60 10 64 2.4E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CYCME_RS06035 785e1b2822952c6dfd4504a724583a6e 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.8E-17 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 PANTHER PTHR23151:SF47 3 153 1.2E-229 T 23-04-2016 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 PANTHER PTHR23151:SF47 171 418 1.2E-229 T 23-04-2016 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 Gene3D G3DSA:4.10.320.10 114 153 5.8E-19 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 Pfam PF02817 e3 binding domain 114 147 2.8E-13 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 SUPERFAMILY SSF52777 177 416 1.29E-85 T 23-04-2016 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 Gene3D G3DSA:3.30.559.10 179 416 2.4E-90 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain CYCME_RS05130 45763946df4786a0906403ab963721f4 418 SUPERFAMILY SSF47005 107 152 8.24E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 418 1.2E-174 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 SUPERFAMILY SSF51230 1 95 1.57E-24 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS05130 45763946df4786a0906403ab963721f4 418 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYCME_RS05130 45763946df4786a0906403ab963721f4 418 Pfam PF00364 Biotin-requiring enzyme 4 76 3.4E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CYCME_RS05130 45763946df4786a0906403ab963721f4 418 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 187 416 1.5E-80 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 PANTHER PTHR23151 3 153 1.2E-229 T 23-04-2016 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 PANTHER PTHR23151 171 418 1.2E-229 T 23-04-2016 CYCME_RS05130 45763946df4786a0906403ab963721f4 418 Gene3D G3DSA:2.40.50.100 1 95 9.5E-25 T 23-04-2016 CYCME_RS10635 7314e128bfd6aa380ffd8c160db8e396 241 PANTHER PTHR40279:SF2 8 239 3.5E-125 T 23-04-2016 CYCME_RS10635 7314e128bfd6aa380ffd8c160db8e396 241 PANTHER PTHR40279 8 239 3.5E-125 T 23-04-2016 CYCME_RS10635 7314e128bfd6aa380ffd8c160db8e396 241 Pfam PF03070 TENA/THI-4/PQQC family 15 223 5.9E-61 T 23-04-2016 IPR004305 Thiaminase-2/PQQC CYCME_RS10635 7314e128bfd6aa380ffd8c160db8e396 241 Gene3D G3DSA:1.20.910.10 4 239 1.6E-115 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 CYCME_RS10635 7314e128bfd6aa380ffd8c160db8e396 241 SUPERFAMILY SSF48613 5 238 2.22E-75 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 CYCME_RS10635 7314e128bfd6aa380ffd8c160db8e396 241 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 9 238 2.5E-113 T 23-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 CYCME_RS10635 7314e128bfd6aa380ffd8c160db8e396 241 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 241 127.104 T 23-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 Gene3D G3DSA:2.160.10.10 210 329 1.5E-21 T 23-04-2016 CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 3 326 35.057 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 PANTHER PTHR22572:SF117 98 295 2.3E-45 T 23-04-2016 CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 PANTHER PTHR22572 98 295 2.3E-45 T 23-04-2016 CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 329 3.8E-111 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 21 86 3.4E-20 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 158 1.2E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 5.1E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 Gene3D G3DSA:2.160.10.10 119 209 4.1E-25 T 23-04-2016 CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 SUPERFAMILY SSF51161 30 318 1.67E-78 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 162 177 0.14 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS07655 c09eb984b8d521668b5485a070de8d40 340 Gene3D G3DSA:2.160.10.10 40 118 1.6E-7 T 23-04-2016 CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 Pfam PF00106 short chain dehydrogenase 5 193 5.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PIRSF PIRSF000126 2 258 3.1E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 Gene3D G3DSA:3.40.50.720 4 224 1.2E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PANTHER PTHR24322 150 168 5.0E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PANTHER PTHR24322 9 134 5.0E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.3E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.3E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.3E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.3E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS11885 be3acb9b4ea55c644adae1069d754c3a 267 SUPERFAMILY SSF51735 3 256 8.85E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS03440 21eaebdd333a22e0158ab5fd68f98f09 93 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 5 93 18.636 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 CYCME_RS03440 21eaebdd333a22e0158ab5fd68f98f09 93 PANTHER PTHR38036:SF1 3 93 1.0E-22 T 23-04-2016 CYCME_RS03440 21eaebdd333a22e0158ab5fd68f98f09 93 Gene3D G3DSA:3.30.70.1460 7 93 8.0E-26 T 23-04-2016 IPR027471 YbeD-like domain CYCME_RS03440 21eaebdd333a22e0158ab5fd68f98f09 93 Pfam PF04359 Protein of unknown function (DUF493) 11 93 1.2E-27 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 CYCME_RS03440 21eaebdd333a22e0158ab5fd68f98f09 93 SUPERFAMILY SSF117991 6 93 2.09E-22 T 23-04-2016 IPR027471 YbeD-like domain CYCME_RS03440 21eaebdd333a22e0158ab5fd68f98f09 93 PANTHER PTHR38036 3 93 1.0E-22 T 23-04-2016 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 566 37.42 T 23-04-2016 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 561 2.8E-107 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 587 4.1E-245 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 PANTHER PTHR22594 374 574 1.7E-246 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 PANTHER PTHR22594 1 300 1.7E-246 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 Gene3D G3DSA:3.30.930.10 418 588 7.7E-112 T 23-04-2016 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 Gene3D G3DSA:3.30.930.10 134 279 7.7E-112 T 23-04-2016 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 SUPERFAMILY SSF55681 428 588 1.23E-102 T 23-04-2016 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 SUPERFAMILY SSF55681 116 295 1.23E-102 T 23-04-2016 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 PANTHER PTHR22594:SF5 374 574 1.7E-246 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 PANTHER PTHR22594:SF5 1 300 1.7E-246 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 SUPERFAMILY SSF55261 292 423 1.42E-43 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 1.3E-17 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 2.5E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 2.5E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 2.5E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 2.5E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 Gene3D G3DSA:3.30.1360.30 280 417 7.3E-45 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 Gene3D G3DSA:2.40.50.140 1 108 3.0E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 Pfam PF02938 GAD domain 311 410 7.1E-31 T 23-04-2016 IPR029351 GAD domain CYCME_RS11570 ba6a38047b0851a2f7fb3cb705baafdc 595 SUPERFAMILY SSF50249 2 106 8.76E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS06995 004fe0298c4395286bdea9e6ecd57b5a 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 117 1.1E-25 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 CYCME_RS06995 004fe0298c4395286bdea9e6ecd57b5a 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 129 229 2.9E-8 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CYCME_RS06995 004fe0298c4395286bdea9e6ecd57b5a 347 Gene3D G3DSA:3.40.50.720 1 128 2.2E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06995 004fe0298c4395286bdea9e6ecd57b5a 347 SUPERFAMILY SSF51735 2 160 3.52E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06995 004fe0298c4395286bdea9e6ecd57b5a 347 SUPERFAMILY SSF55347 124 282 8.67E-31 T 23-04-2016 CYCME_RS06995 004fe0298c4395286bdea9e6ecd57b5a 347 PANTHER PTHR22604 1 345 2.7E-73 T 23-04-2016 CYCME_RS06995 004fe0298c4395286bdea9e6ecd57b5a 347 Gene3D G3DSA:3.30.360.10 129 338 3.6E-41 T 23-04-2016 CYCME_RS07275 e1706ca481ee9c3b4c4d6873dd57541d 463 SUPERFAMILY SSF53850 173 307 1.19E-22 T 23-04-2016 CYCME_RS07275 e1706ca481ee9c3b4c4d6873dd57541d 463 SUPERFAMILY SSF53850 42 143 1.19E-22 T 23-04-2016 CYCME_RS07275 e1706ca481ee9c3b4c4d6873dd57541d 463 PANTHER PTHR30024 6 146 6.1E-135 T 23-04-2016 CYCME_RS07275 e1706ca481ee9c3b4c4d6873dd57541d 463 PANTHER PTHR30024 175 441 6.1E-135 T 23-04-2016 CYCME_RS07275 e1706ca481ee9c3b4c4d6873dd57541d 463 PANTHER PTHR30024:SF7 6 146 6.1E-135 T 23-04-2016 CYCME_RS07275 e1706ca481ee9c3b4c4d6873dd57541d 463 PANTHER PTHR30024:SF7 175 441 6.1E-135 T 23-04-2016 CYCME_RS07275 e1706ca481ee9c3b4c4d6873dd57541d 463 Pfam PF13379 NMT1-like family 41 318 2.4E-105 T 23-04-2016 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 Gene3D G3DSA:3.90.190.20 353 495 2.5E-51 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 Pfam PF01225 Mur ligase family, catalytic domain 29 76 4.7E-6 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 PANTHER PTHR23135 16 516 1.3E-160 T 23-04-2016 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 Gene3D G3DSA:3.40.1190.10 114 352 2.4E-70 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 Gene3D G3DSA:3.40.1390.10 15 112 6.0E-17 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 Pfam PF08245 Mur ligase middle domain 123 328 8.9E-46 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 27 502 1.6E-149 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 SUPERFAMILY SSF63418 13 112 1.01E-14 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 SUPERFAMILY SSF53623 114 346 3.89E-68 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 11 502 31.925 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 SUPERFAMILY SSF53244 349 503 7.72E-44 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 Pfam PF02875 Mur ligase family, glutamate ligase domain 349 434 6.0E-20 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11145 1a43213d34c13424cadca96098c5fb1d 517 PANTHER PTHR23135:SF4 16 516 1.3E-160 T 23-04-2016 CYCME_RS05190 4520b7877215a514fb923760ca537960 262 SUPERFAMILY SSF117143 93 223 1.96E-31 T 23-04-2016 CYCME_RS05190 4520b7877215a514fb923760ca537960 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 4.1E-23 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CYCME_RS05190 4520b7877215a514fb923760ca537960 262 PANTHER PTHR30435:SF19 1 260 4.4E-125 T 23-04-2016 CYCME_RS05190 4520b7877215a514fb923760ca537960 262 Pfam PF00460 Flagella basal body rod protein 6 36 1.2E-13 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CYCME_RS05190 4520b7877215a514fb923760ca537960 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 137 3.8E-50 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CYCME_RS05190 4520b7877215a514fb923760ca537960 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 244 5.5E-29 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CYCME_RS05190 4520b7877215a514fb923760ca537960 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 5 260 5.7E-115 T 23-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CYCME_RS05190 4520b7877215a514fb923760ca537960 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CYCME_RS05190 4520b7877215a514fb923760ca537960 262 PANTHER PTHR30435 1 260 4.4E-125 T 23-04-2016 CYCME_RS04175 0ca05aa5036cfbd86cbca493c231a9d5 307 Gene3D G3DSA:2.40.160.60 201 231 7.1E-4 T 23-04-2016 CYCME_RS04175 0ca05aa5036cfbd86cbca493c231a9d5 307 Gene3D G3DSA:2.40.160.60 51 122 7.1E-4 T 23-04-2016 CYCME_RS04895 9c33f717982f26775bea753f7272bc8b 148 Gene3D G3DSA:3.10.129.10 14 142 8.0E-17 T 23-04-2016 IPR029069 HotDog domain CYCME_RS04895 9c33f717982f26775bea753f7272bc8b 148 PANTHER PTHR12418:SF18 7 146 1.1E-31 T 23-04-2016 CYCME_RS04895 9c33f717982f26775bea753f7272bc8b 148 SUPERFAMILY SSF54637 10 142 6.79E-17 T 23-04-2016 IPR029069 HotDog domain CYCME_RS04895 9c33f717982f26775bea753f7272bc8b 148 Pfam PF03061 Thioesterase superfamily 59 130 4.4E-6 T 23-04-2016 IPR006683 Thioesterase domain CYCME_RS04895 9c33f717982f26775bea753f7272bc8b 148 PANTHER PTHR12418 7 146 1.1E-31 T 23-04-2016 CYCME_RS11555 d22a92dabc678cde309d581c670213f0 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS11555 d22a92dabc678cde309d581c670213f0 155 Gene3D G3DSA:3.30.700.10 15 144 3.8E-35 T 23-04-2016 CYCME_RS11555 d22a92dabc678cde309d581c670213f0 155 PANTHER PTHR30093 1 71 1.5E-19 T 23-04-2016 CYCME_RS11555 d22a92dabc678cde309d581c670213f0 155 SUPERFAMILY SSF54523 15 154 1.15E-23 T 23-04-2016 CYCME_RS11555 d22a92dabc678cde309d581c670213f0 155 Pfam PF13633 Prokaryotic N-terminal methylation site 12 38 7.0E-13 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS11555 d22a92dabc678cde309d581c670213f0 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 8.9E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS11555 d22a92dabc678cde309d581c670213f0 155 Pfam PF00114 Pilin (bacterial filament) 44 155 9.5E-11 T 23-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CYCME_RS01675 b213a35a22b0e35634a3bd22078b7d44 76 PANTHER PTHR33279 1 74 4.0E-14 T 23-04-2016 CYCME_RS01675 b213a35a22b0e35634a3bd22078b7d44 76 SUPERFAMILY SSF64307 2 73 3.92E-19 T 23-04-2016 IPR001455 TusA-like domain CYCME_RS01675 b213a35a22b0e35634a3bd22078b7d44 76 Pfam PF01206 Sulfurtransferase TusA 5 73 2.7E-16 T 23-04-2016 IPR001455 TusA-like domain CYCME_RS01675 b213a35a22b0e35634a3bd22078b7d44 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 23-04-2016 IPR001455 TusA-like domain CYCME_RS01675 b213a35a22b0e35634a3bd22078b7d44 76 Gene3D G3DSA:3.30.110.40 1 73 1.5E-21 T 23-04-2016 IPR001455 TusA-like domain CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SMART SM00073 680 770 2.8E-4 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Gene3D G3DSA:1.20.120.160 681 775 2.3E-13 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Gene3D G3DSA:1.10.287.130 270 338 1.3E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SUPERFAMILY SSF55874 332 502 3.14E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Gene3D G3DSA:3.30.565.10 345 505 2.5E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SUPERFAMILY SSF158472 191 242 7.98E-5 T 23-04-2016 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SMART SM00387 390 502 7.3E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 PANTHER PTHR24423 257 683 2.7E-108 T 23-04-2016 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Pfam PF00072 Response regulator receiver domain 528 639 2.1E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SMART SM00388 278 343 3.7E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SUPERFAMILY SSF47384 265 344 6.47E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Gene3D G3DSA:3.40.50.2300 523 648 1.7E-28 T 23-04-2016 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SUPERFAMILY SSF47226 624 637 8.64E-19 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SUPERFAMILY SSF47226 669 769 8.64E-19 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Pfam PF00672 HAMP domain 171 241 4.1E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SUPERFAMILY SSF52172 524 648 9.53E-28 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 499 5.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 5.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 480 5.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 501 9.7E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SMART SM00448 526 641 5.4E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 343 5.1E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 Pfam PF01627 Hpt domain 690 752 1.3E-9 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CYCME_RS08525 685be7c76b9dcb5b51237da6996f6a65 789 SMART SM00304 190 245 2.6E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS08225 fbb128b01aeb19d5bf4d5acd23de74ae 66 SUPERFAMILY SSF69047 1 65 3.01E-23 T 23-04-2016 IPR008462 CsbD-like CYCME_RS08225 fbb128b01aeb19d5bf4d5acd23de74ae 66 Gene3D G3DSA:1.10.1470.10 1 65 4.3E-25 T 23-04-2016 IPR008462 CsbD-like CYCME_RS08225 fbb128b01aeb19d5bf4d5acd23de74ae 66 PIRSF PIRSF039008 1 66 8.0E-29 T 23-04-2016 IPR026042 Stress response protein YjbJ CYCME_RS08225 fbb128b01aeb19d5bf4d5acd23de74ae 66 Pfam PF05532 CsbD-like 4 55 5.0E-16 T 23-04-2016 IPR008462 CsbD-like CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 Gene3D G3DSA:2.160.10.10 89 254 1.1E-59 T 23-04-2016 CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 9.8E-14 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 PANTHER PTHR19136 13 271 6.6E-121 T 23-04-2016 CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 Gene3D G3DSA:1.10.166.10 1 70 1.4E-29 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 PANTHER PTHR19136:SF52 13 271 6.6E-121 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 SUPERFAMILY SSF51161 1 256 4.44E-72 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 271 5.0E-141 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 1.9E-24 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CYCME_RS05315 432a7cb19fccf6cb4fede49782583af5 272 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.232 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CYCME_RS07155 03dec5ab1a675b5e3dc8c5e86eff262f 534 Pfam PF02706 Chain length determinant protein 8 162 8.5E-5 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 CYCME_RS07155 03dec5ab1a675b5e3dc8c5e86eff262f 534 PANTHER PTHR32309 8 479 4.5E-30 T 23-04-2016 CYCME_RS11195 2f8be75bb48d895eccb60d0a574d5fbe 137 PANTHER PTHR30558:SF3 9 136 2.9E-13 T 23-04-2016 CYCME_RS11195 2f8be75bb48d895eccb60d0a574d5fbe 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 125 9.9E-17 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CYCME_RS11195 2f8be75bb48d895eccb60d0a574d5fbe 137 PANTHER PTHR30558 9 136 2.9E-13 T 23-04-2016 CYCME_RS04435 92b9c61b5f2e91200f53cf0daf1488b7 280 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 13 279 22.728 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CYCME_RS04435 92b9c61b5f2e91200f53cf0daf1488b7 280 PANTHER PTHR12592:SF0 15 279 6.9E-74 T 23-04-2016 CYCME_RS04435 92b9c61b5f2e91200f53cf0daf1488b7 280 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 16 278 1.5E-69 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CYCME_RS04435 92b9c61b5f2e91200f53cf0daf1488b7 280 Pfam PF01256 Carbohydrate kinase 36 273 3.3E-61 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CYCME_RS04435 92b9c61b5f2e91200f53cf0daf1488b7 280 Gene3D G3DSA:3.40.1190.20 8 279 1.4E-87 T 23-04-2016 IPR029056 Ribokinase-like CYCME_RS04435 92b9c61b5f2e91200f53cf0daf1488b7 280 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 218 228 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site CYCME_RS04435 92b9c61b5f2e91200f53cf0daf1488b7 280 SUPERFAMILY SSF53613 13 279 1.71E-72 T 23-04-2016 IPR029056 Ribokinase-like CYCME_RS04435 92b9c61b5f2e91200f53cf0daf1488b7 280 PANTHER PTHR12592 15 279 6.9E-74 T 23-04-2016 CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 PANTHER PTHR22769:SF17 1 179 1.9E-71 T 23-04-2016 CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 Pfam PF14803 Nudix N-terminal 7 40 9.9E-15 T 23-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 PANTHER PTHR22769 1 179 1.9E-71 T 23-04-2016 CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 Pfam PF00293 NUDIX domain 43 157 2.1E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 SUPERFAMILY SSF55811 7 167 3.79E-39 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 Gene3D G3DSA:3.90.79.10 41 175 8.4E-34 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 Gene3D G3DSA:2.20.70.10 5 40 1.5E-15 T 23-04-2016 CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 PRINTS PR00502 NUDIX hydrolase family signature 70 84 5.1E-5 T 23-04-2016 IPR020476 NUDIX hydrolase CYCME_RS02510 091b9709d5f80833951f6711db8746fb 185 PRINTS PR00502 NUDIX hydrolase family signature 84 99 5.1E-5 T 23-04-2016 IPR020476 NUDIX hydrolase CYCME_RS03390 51b17100e7716c2883a8b7740c5730e0 68 Pfam PF04325 Protein of unknown function (DUF465) 15 59 1.8E-10 T 23-04-2016 IPR007420 Protein of unknown function DUF465 CYCME_RS07565 bde2769ac86f77a9538a7cbe91e9d8f7 218 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 10 217 32.799 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CYCME_RS07565 bde2769ac86f77a9538a7cbe91e9d8f7 218 Gene3D G3DSA:3.40.50.150 25 216 4.8E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS07565 bde2769ac86f77a9538a7cbe91e9d8f7 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 15 215 6.0E-55 T 23-04-2016 CYCME_RS07565 bde2769ac86f77a9538a7cbe91e9d8f7 218 SUPERFAMILY SSF53335 23 214 9.36E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS07565 bde2769ac86f77a9538a7cbe91e9d8f7 218 PANTHER PTHR11579 4 212 4.5E-68 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CYCME_RS07565 bde2769ac86f77a9538a7cbe91e9d8f7 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 10 216 1.0E-59 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 Gene3D G3DSA:1.25.40.10 163 375 4.7E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SUPERFAMILY SSF48452 333 402 9.48E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 Gene3D G3DSA:1.25.40.10 376 567 2.5E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 Pfam PF13181 Tetratricopeptide repeat 467 500 0.16 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 Pfam PF14559 Tetratricopeptide repeat 513 577 6.6E-6 T 23-04-2016 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SUPERFAMILY SSF48452 164 320 1.1E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SMART SM00028 229 262 51.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SMART SM00028 398 431 81.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SMART SM00028 363 396 98.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SMART SM00028 534 567 4.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SMART SM00028 466 500 39.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SMART SM00028 296 329 370.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SMART SM00028 330 358 320.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 SUPERFAMILY SSF48452 396 569 2.28E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 Pfam PF13174 Tetratricopeptide repeat 369 395 0.008 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 PANTHER PTHR23083 53 78 1.0E-42 T 23-04-2016 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 PANTHER PTHR23083 225 571 1.0E-42 T 23-04-2016 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 PANTHER PTHR23083 181 209 1.0E-42 T 23-04-2016 CYCME_RS03530 d8fb9567945cd42fba6be00aa39f0e44 578 Pfam PF13432 Tetratricopeptide repeat 300 355 0.0059 T 23-04-2016 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 PANTHER PTHR33406:SF2 1 95 1.4E-36 T 23-04-2016 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 PANTHER PTHR33406:SF2 115 763 1.4E-36 T 23-04-2016 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 Pfam PF03176 MMPL family 136 388 7.8E-9 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 Pfam PF03176 MMPL family 589 763 1.0E-17 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 SUPERFAMILY SSF82866 155 371 1.83E-23 T 23-04-2016 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 Gene3D G3DSA:1.20.1640.10 599 766 1.5E-28 T 23-04-2016 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 Gene3D G3DSA:1.20.1640.10 189 378 4.2E-19 T 23-04-2016 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 PANTHER PTHR33406 1 95 1.4E-36 T 23-04-2016 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 PANTHER PTHR33406 115 763 1.4E-36 T 23-04-2016 CYCME_RS12460 63d2883660c094866cd757f8e03d73cc 776 SUPERFAMILY SSF82866 586 766 4.58E-31 T 23-04-2016 CYCME_RS04855 bfdf6a3923d9e932dd11f329156c79c6 299 Pfam PF13280 WYL domain 127 213 1.1E-11 T 23-04-2016 IPR026881 WYL domain CYCME_RS04855 bfdf6a3923d9e932dd11f329156c79c6 299 PIRSF PIRSF015558 6 293 5.0E-94 T 23-04-2016 IPR016634 Transcription regulator, DeoR type, predicted CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 1.4E-24 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 PANTHER PTHR24095 20 643 0.0 T 23-04-2016 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 Gene3D G3DSA:2.30.38.10 437 513 5.2E-6 T 23-04-2016 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 Gene3D G3DSA:3.30.300.30 516 635 2.5E-26 T 23-04-2016 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 80 2.5E-19 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 PANTHER PTHR24095:SF178 20 643 0.0 T 23-04-2016 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 641 0.0 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 Pfam PF00501 AMP-binding enzyme 82 520 1.8E-94 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 Gene3D G3DSA:3.40.50.980 264 422 2.4E-30 T 23-04-2016 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 SUPERFAMILY SSF56801 10 642 2.09E-186 T 23-04-2016 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 Gene3D G3DSA:3.40.50.980 78 263 3.9E-47 T 23-04-2016 CYCME_RS09955 c5494794d10802ffdef6ab0d050c801a 646 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 643 53.483 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 SUPERFAMILY SSF52172 6 154 1.17E-37 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 PANTHER PTHR26402:SF495 7 138 2.7E-40 T 23-04-2016 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 PANTHER PTHR26402:SF495 264 290 2.7E-40 T 23-04-2016 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 Pfam PF01966 HD domain 175 298 3.7E-18 T 23-04-2016 IPR006674 HD domain CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 PANTHER PTHR26402 7 138 2.7E-40 T 23-04-2016 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 PANTHER PTHR26402 264 290 2.7E-40 T 23-04-2016 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 SMART SM00471 169 308 1.0E-7 T 23-04-2016 IPR003607 HD/PDEase domain CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 SUPERFAMILY SSF109604 162 339 1.31E-34 T 23-04-2016 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 SMART SM00448 7 120 2.6E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 Pfam PF00072 Response regulator receiver domain 9 120 9.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 Gene3D G3DSA:3.40.50.2300 4 129 1.0E-40 T 23-04-2016 CYCME_RS10675 fa269b7c01c512483541a4298882b49d 354 Gene3D G3DSA:1.10.3210.10 161 308 4.2E-17 T 23-04-2016 IPR006674 HD domain CYCME_RS01195 01cc6e5c46754472dc125d809b5365b7 169 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.7E-25 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CYCME_RS01195 01cc6e5c46754472dc125d809b5365b7 169 Gene3D G3DSA:1.20.1550.10 7 163 7.6E-30 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain CYCME_RS01195 01cc6e5c46754472dc125d809b5365b7 169 SUPERFAMILY SSF158442 15 161 2.09E-23 T 23-04-2016 CYCME_RS01195 01cc6e5c46754472dc125d809b5365b7 169 PANTHER PTHR36570 13 165 1.9E-15 T 23-04-2016 CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 SUPERFAMILY SSF51206 139 251 4.98E-24 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 Gene3D G3DSA:3.40.250.10 251 342 3.6E-14 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 172 188 - T 23-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 SMART SM00450 257 350 1.8E-8 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 Pfam PF00581 Rhodanese-like domain 272 342 2.4E-8 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 Pfam PF00027 Cyclic nucleotide-binding domain 164 250 7.3E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 Gene3D G3DSA:2.60.120.10 140 250 1.7E-25 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 SUPERFAMILY SSF51206 6 109 7.07E-11 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 SUPERFAMILY SSF52821 243 342 5.63E-18 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 SMART SM00100 18 129 3.2 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 SMART SM00100 145 263 1.4E-13 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 PANTHER PTHR24567 43 261 3.2E-12 T 23-04-2016 CYCME_RS02555 5c8479729cb7fc4e047a71fd3858ff26 1504 Gene3D G3DSA:2.60.120.10 6 108 1.4E-9 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 Gene3D G3DSA:1.10.150.130 8 101 1.4E-29 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 297 35.068 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 90 5.3E-24 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 Gene3D G3DSA:1.10.443.10 114 290 9.1E-54 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 10 298 3.5E-111 T 23-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 PANTHER PTHR30349 10 301 1.3E-132 T 23-04-2016 CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 SUPERFAMILY SSF56349 16 289 1.65E-58 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 Pfam PF00589 Phage integrase family 113 283 2.3E-50 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS01770 71d9373f62f35a32e295eea524026141 302 PANTHER PTHR30349:SF17 10 301 1.3E-132 T 23-04-2016 CYCME_RS10375 89c79cba6c8e5db570e3b64a489492f9 147 SUPERFAMILY SSF46626 1 17 1.83E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS10375 89c79cba6c8e5db570e3b64a489492f9 147 SUPERFAMILY SSF46626 48 139 1.83E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS10375 89c79cba6c8e5db570e3b64a489492f9 147 Gene3D G3DSA:1.10.760.10 55 142 8.0E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS10375 89c79cba6c8e5db570e3b64a489492f9 147 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 55 134 6.0E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 Pfam PF02803 Thiolase, C-terminal domain 261 336 2.5E-5 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 Gene3D G3DSA:3.40.47.10 250 368 2.2E-9 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 Gene3D G3DSA:3.40.47.10 153 188 2.2E-9 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 SUPERFAMILY SSF53901 10 118 1.28E-20 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 SUPERFAMILY SSF53901 186 379 1.28E-20 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 PANTHER PTHR18919:SF108 2 387 4.7E-68 T 23-04-2016 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 Gene3D G3DSA:3.40.47.10 26 114 5.1E-13 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 Gene3D G3DSA:3.40.47.10 199 229 5.1E-13 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 PANTHER PTHR18919 2 387 4.7E-68 T 23-04-2016 CYCME_RS01150 d0327358970fccdfe40e9d711d241f6a 387 PIRSF PIRSF000429 8 379 3.4E-14 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS08180 d948987ea4a93725bb34e35c457a1b5e 282 SUPERFAMILY SSF103481 32 130 1.7E-15 T 23-04-2016 CYCME_RS08180 d948987ea4a93725bb34e35c457a1b5e 282 PANTHER PTHR22911 1 282 6.3E-74 T 23-04-2016 CYCME_RS08180 d948987ea4a93725bb34e35c457a1b5e 282 PANTHER PTHR22911:SF6 1 282 6.3E-74 T 23-04-2016 CYCME_RS08180 d948987ea4a93725bb34e35c457a1b5e 282 Pfam PF00892 EamA-like transporter family 1 127 3.0E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS08180 d948987ea4a93725bb34e35c457a1b5e 282 Pfam PF00892 EamA-like transporter family 144 273 9.1E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS08180 d948987ea4a93725bb34e35c457a1b5e 282 SUPERFAMILY SSF103481 177 275 3.01E-15 T 23-04-2016 CYCME_RS06735 34dcf572183db3510e393231b85e91df 281 PANTHER PTHR30535 21 276 1.5E-27 T 23-04-2016 CYCME_RS06735 34dcf572183db3510e393231b85e91df 281 Gene3D G3DSA:3.40.50.1980 25 144 5.9E-14 T 23-04-2016 CYCME_RS06735 34dcf572183db3510e393231b85e91df 281 Pfam PF01497 Periplasmic binding protein 29 256 1.3E-21 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CYCME_RS06735 34dcf572183db3510e393231b85e91df 281 Gene3D G3DSA:3.40.50.1980 158 276 2.4E-16 T 23-04-2016 CYCME_RS06735 34dcf572183db3510e393231b85e91df 281 SUPERFAMILY SSF53807 25 276 7.2E-40 T 23-04-2016 CYCME_RS09860 fbab6c18aad7ba7bb7aeb6193d488823 196 Pfam PF13580 SIS domain 10 146 4.5E-34 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CYCME_RS09860 fbab6c18aad7ba7bb7aeb6193d488823 196 SUPERFAMILY SSF53697 3 195 4.04E-53 T 23-04-2016 CYCME_RS09860 fbab6c18aad7ba7bb7aeb6193d488823 196 Gene3D G3DSA:3.40.50.10490 3 195 5.3E-59 T 23-04-2016 CYCME_RS09860 fbab6c18aad7ba7bb7aeb6193d488823 196 PANTHER PTHR30390 3 196 1.1E-109 T 23-04-2016 CYCME_RS09860 fbab6c18aad7ba7bb7aeb6193d488823 196 PANTHER PTHR30390:SF5 3 196 1.1E-109 T 23-04-2016 CYCME_RS09860 fbab6c18aad7ba7bb7aeb6193d488823 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 194 36.213 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 SUPERFAMILY SSF102114 7 380 7.59E-95 T 23-04-2016 CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 Gene3D G3DSA:3.80.30.20 8 217 2.1E-31 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 Pfam PF04055 Radical SAM superfamily 12 179 6.9E-21 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 Gene3D G3DSA:1.10.10.10 320 375 7.5E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 372 3.2E-112 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 Pfam PF06969 HemN C-terminal domain 309 369 5.3E-8 T 23-04-2016 IPR010723 HemN, C-terminal CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 PANTHER PTHR13932 7 383 1.5E-159 T 23-04-2016 CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 PANTHER PTHR13932:SF7 7 383 1.5E-159 T 23-04-2016 CYCME_RS03010 207c1a78b0c2479c7608a1ce8b93a29d 383 SMART SM00729 7 226 4.3E-46 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS03270 a22a824bc6a5d95139d8313d7e399fa4 191 Gene3D G3DSA:3.10.450.50 15 191 4.0E-70 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS03270 a22a824bc6a5d95139d8313d7e399fa4 191 PANTHER PTHR41534 13 191 6.3E-28 T 23-04-2016 CYCME_RS03270 a22a824bc6a5d95139d8313d7e399fa4 191 Pfam PF00866 Ring hydroxylating beta subunit 30 183 3.5E-57 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS03270 a22a824bc6a5d95139d8313d7e399fa4 191 SUPERFAMILY SSF54427 17 191 1.29E-46 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS03270 a22a824bc6a5d95139d8313d7e399fa4 191 PANTHER PTHR41534:SF2 13 191 6.3E-28 T 23-04-2016 CYCME_RS02930 3999ae94c99544986e4f00d5a8e45fa2 293 PANTHER PTHR18895:SF69 16 284 2.2E-96 T 23-04-2016 CYCME_RS02930 3999ae94c99544986e4f00d5a8e45fa2 293 Gene3D G3DSA:3.40.50.150 99 280 4.3E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02930 3999ae94c99544986e4f00d5a8e45fa2 293 PANTHER PTHR18895 16 284 2.2E-96 T 23-04-2016 CYCME_RS02930 3999ae94c99544986e4f00d5a8e45fa2 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 29.866 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CYCME_RS02930 3999ae94c99544986e4f00d5a8e45fa2 293 SUPERFAMILY SSF53335 59 284 4.0E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02930 3999ae94c99544986e4f00d5a8e45fa2 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.1E-88 T 23-04-2016 CYCME_RS02930 3999ae94c99544986e4f00d5a8e45fa2 293 PIRSF PIRSF000401 1 293 2.0E-80 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CYCME_RS02930 3999ae94c99544986e4f00d5a8e45fa2 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 6.7E-80 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CYCME_RS02855 80031b58550094c3c8d914dac6e136f8 137 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 63 87 - T 23-04-2016 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 CYCME_RS02855 80031b58550094c3c8d914dac6e136f8 137 PANTHER PTHR10681 14 137 1.2E-16 T 23-04-2016 CYCME_RS02855 80031b58550094c3c8d914dac6e136f8 137 Gene3D G3DSA:1.10.490.10 14 135 2.3E-41 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CYCME_RS02855 80031b58550094c3c8d914dac6e136f8 137 Pfam PF01152 Bacterial-like globin 15 132 2.8E-36 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 CYCME_RS02855 80031b58550094c3c8d914dac6e136f8 137 SUPERFAMILY SSF46458 14 135 2.47E-35 T 23-04-2016 IPR009050 Globin-like CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 Pfam PF02108 Flagellar assembly protein FliH 73 195 1.6E-34 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 PRINTS PR01003 Flagellar assembly protein FliH signature 37 59 4.4E-8 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 PRINTS PR01003 Flagellar assembly protein FliH signature 60 78 4.4E-8 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 PRINTS PR01003 Flagellar assembly protein FliH signature 79 98 4.4E-8 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 PRINTS PR01003 Flagellar assembly protein FliH signature 180 205 4.4E-8 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 PRINTS PR01003 Flagellar assembly protein FliH signature 163 179 4.4E-8 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 PRINTS PR01003 Flagellar assembly protein FliH signature 99 116 4.4E-8 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 PANTHER PTHR34982:SF1 45 199 2.2E-30 T 23-04-2016 CYCME_RS09095 e24f3991351fd53ee7e621b8c620ac10 210 PANTHER PTHR34982 45 199 2.2E-30 T 23-04-2016 CYCME_RS02100 193b9c3abf80f2d6c12e0a3bcea2ff8b 265 SUPERFAMILY SSF51366 15 264 7.89E-93 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CYCME_RS02100 193b9c3abf80f2d6c12e0a3bcea2ff8b 265 Gene3D G3DSA:3.20.20.70 5 264 6.8E-111 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS02100 193b9c3abf80f2d6c12e0a3bcea2ff8b 265 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 263 6.9E-99 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CYCME_RS02100 193b9c3abf80f2d6c12e0a3bcea2ff8b 265 PANTHER PTHR22854 1 265 6.3E-118 T 23-04-2016 CYCME_RS02100 193b9c3abf80f2d6c12e0a3bcea2ff8b 265 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 59 77 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CYCME_RS02100 193b9c3abf80f2d6c12e0a3bcea2ff8b 265 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 6 265 37.314 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CYCME_RS02100 193b9c3abf80f2d6c12e0a3bcea2ff8b 265 PANTHER PTHR22854:SF2 1 265 6.3E-118 T 23-04-2016 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 5.3E-19 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 PANTHER PTHR21499 3 369 9.2E-130 T 23-04-2016 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 PIRSF PIRSF000098 1 435 2.6E-166 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 Gene3D G3DSA:3.40.50.720 2 148 4.9E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 PANTHER PTHR21499:SF2 3 369 9.2E-130 T 23-04-2016 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 SUPERFAMILY SSF55021 353 423 7.89E-14 T 23-04-2016 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 SUPERFAMILY SSF55347 137 302 3.4E-52 T 23-04-2016 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 Gene3D G3DSA:3.30.70.260 354 424 4.1E-12 T 23-04-2016 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 Gene3D G3DSA:3.30.360.10 149 298 2.6E-56 T 23-04-2016 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 Pfam PF01842 ACT domain 355 420 9.2E-14 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 Pfam PF00742 Homoserine dehydrogenase 137 315 4.8E-64 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CYCME_RS07540 8b4fcd105fb6c807f273bf99ac269a04 436 SUPERFAMILY SSF51735 2 158 6.15E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 SUPERFAMILY SSF46977 423 529 1.7E-32 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 Pfam PF00890 FAD binding domain 9 390 1.6E-88 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 Gene3D G3DSA:3.50.50.60 347 413 2.2E-93 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 Gene3D G3DSA:3.50.50.60 4 241 2.2E-93 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 PANTHER PTHR11632 1 522 3.6E-238 T 23-04-2016 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 PANTHER PTHR11632:SF27 1 522 3.6E-238 T 23-04-2016 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 531 4.1E-17 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 518 1.1E-189 T 23-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 Gene3D G3DSA:3.90.700.10 242 346 6.3E-36 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 Gene3D G3DSA:1.20.58.100 424 531 3.2E-34 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.2E-6 T 23-04-2016 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 4.2E-6 T 23-04-2016 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 SUPERFAMILY SSF51905 354 446 1.66E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 SUPERFAMILY SSF51905 4 253 1.66E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07420 72f3c155e926ae46fade151d7ef5721a 533 SUPERFAMILY SSF56425 236 351 1.64E-40 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CYCME_RS02385 1f57d86b1f0e8996a36408a3fa136b2e 484 SUPERFAMILY SSF53383 2 479 3.35E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS02385 1f57d86b1f0e8996a36408a3fa136b2e 484 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 1 481 56.603 T 23-04-2016 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 CYCME_RS02385 1f57d86b1f0e8996a36408a3fa136b2e 484 Pfam PF02347 Glycine cleavage system P-protein 34 366 1.7E-10 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 CYCME_RS02385 1f57d86b1f0e8996a36408a3fa136b2e 484 Gene3D G3DSA:3.40.640.10 101 290 1.6E-31 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS02385 1f57d86b1f0e8996a36408a3fa136b2e 484 PANTHER PTHR11773 1 479 2.2E-242 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 CYCME_RS00200 a11d56a069a559648349ab814adcb5c0 496 PANTHER PTHR21588:SF5 79 496 6.7E-65 T 23-04-2016 CYCME_RS00200 a11d56a069a559648349ab814adcb5c0 496 PANTHER PTHR21588 79 496 6.7E-65 T 23-04-2016 CYCME_RS00200 a11d56a069a559648349ab814adcb5c0 496 Gene3D G3DSA:2.130.10.10 432 494 1.6E-26 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS00200 a11d56a069a559648349ab814adcb5c0 496 Gene3D G3DSA:2.130.10.10 32 302 1.6E-26 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS00200 a11d56a069a559648349ab814adcb5c0 496 SUPERFAMILY SSF51004 49 275 5.23E-19 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CYCME_RS09080 587fca6099e63a6b62c43be03f106c3e 63 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 1 60 3.6E-8 T 23-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CYCME_RS09080 587fca6099e63a6b62c43be03f106c3e 63 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 1 62 3.9E-12 T 23-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CYCME_RS06400 40aa9487069f1e161cd86482b195b23f 210 Gene3D G3DSA:1.10.760.10 121 206 8.4E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06400 40aa9487069f1e161cd86482b195b23f 210 SUPERFAMILY SSF46626 45 98 5.76E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06400 40aa9487069f1e161cd86482b195b23f 210 Gene3D G3DSA:1.10.710.10 54 80 4.5E-4 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 CYCME_RS06400 40aa9487069f1e161cd86482b195b23f 210 Gene3D G3DSA:1.10.760.10 14 53 1.9E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06400 40aa9487069f1e161cd86482b195b23f 210 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 125 204 4.9E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06400 40aa9487069f1e161cd86482b195b23f 210 SUPERFAMILY SSF46626 118 207 8.29E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12010 d37607d41111dfaa483778ba737ed2b2 59 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 52 3.9E-16 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 CYCME_RS12010 d37607d41111dfaa483778ba737ed2b2 59 Pfam PF12728 Helix-turn-helix domain 6 54 4.1E-19 T 23-04-2016 CYCME_RS12010 d37607d41111dfaa483778ba737ed2b2 59 Gene3D G3DSA:1.10.10.10 5 57 6.0E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS12010 d37607d41111dfaa483778ba737ed2b2 59 SUPERFAMILY SSF46955 5 56 1.23E-8 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS07460 f9dc7c8181f3dc5cbe7347389105238c 196 Pfam PF02630 SCO1/SenC 7 173 9.7E-34 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC CYCME_RS07460 f9dc7c8181f3dc5cbe7347389105238c 196 PANTHER PTHR12151:SF0 42 194 3.7E-43 T 23-04-2016 CYCME_RS07460 f9dc7c8181f3dc5cbe7347389105238c 196 Gene3D G3DSA:3.40.30.10 12 195 2.2E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS07460 f9dc7c8181f3dc5cbe7347389105238c 196 SUPERFAMILY SSF52833 41 194 1.6E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS07460 f9dc7c8181f3dc5cbe7347389105238c 196 PANTHER PTHR12151 42 194 3.7E-43 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 97 110 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 PANTHER PTHR11606:SF16 5 420 1.2E-157 T 23-04-2016 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 Gene3D G3DSA:3.40.50.720 178 421 7.4E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 Gene3D G3DSA:3.40.192.10 36 176 2.0E-55 T 23-04-2016 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 178 420 4.2E-63 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 89 103 1.5E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 211 231 1.5E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 169 191 1.5E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 1.5E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 PANTHER PTHR11606 5 420 1.2E-157 T 23-04-2016 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 SUPERFAMILY SSF53223 2 180 2.56E-65 T 23-04-2016 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 PIRSF PIRSF000185 1 423 1.2E-156 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 SMART SM00839 180 420 5.8E-75 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 35 159 4.0E-53 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 CYCME_RS12255 e771cecd4714ac55c77572f74e3abaeb 431 SUPERFAMILY SSF51735 178 420 1.55E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 97 110 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 PANTHER PTHR11606:SF16 5 420 1.2E-157 T 23-04-2016 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 Gene3D G3DSA:3.40.50.720 178 421 7.4E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 Gene3D G3DSA:3.40.192.10 36 176 2.0E-55 T 23-04-2016 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 178 420 4.2E-63 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 89 103 1.5E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 211 231 1.5E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 169 191 1.5E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 1.5E-31 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 PANTHER PTHR11606 5 420 1.2E-157 T 23-04-2016 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 SUPERFAMILY SSF53223 2 180 2.56E-65 T 23-04-2016 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 PIRSF PIRSF000185 1 423 1.2E-156 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 SMART SM00839 180 420 5.8E-75 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 35 159 4.0E-53 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 CYCME_RS01025 e771cecd4714ac55c77572f74e3abaeb 431 SUPERFAMILY SSF51735 178 420 1.55E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 18 476 44.282 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 Gene3D G3DSA:3.40.50.720 19 105 1.5E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 PANTHER PTHR23135:SF5 15 465 6.2E-209 T 23-04-2016 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 PANTHER PTHR23135 15 465 6.2E-209 T 23-04-2016 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 SUPERFAMILY SSF51984 17 105 1.96E-29 T 23-04-2016 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 20 469 1.4E-174 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 Pfam PF01225 Mur ligase family, catalytic domain 20 117 3.7E-28 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 413 1.2E-18 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 Gene3D G3DSA:3.90.190.20 326 475 6.4E-51 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 Pfam PF08245 Mur ligase middle domain 123 304 3.1E-30 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 Gene3D G3DSA:3.40.1190.10 107 325 5.9E-82 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 SUPERFAMILY SSF53623 104 322 3.66E-72 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS11115 c2b70c16960607ed80081f1b653125a3 484 SUPERFAMILY SSF53244 323 473 8.24E-44 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS00780 66dc5c5ff07361c0b5ec6b15dd242982 160 PANTHER PTHR10516 129 160 8.3E-36 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CYCME_RS00780 66dc5c5ff07361c0b5ec6b15dd242982 160 PANTHER PTHR10516 1 83 8.3E-36 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CYCME_RS00780 66dc5c5ff07361c0b5ec6b15dd242982 160 Gene3D G3DSA:3.10.50.40 126 140 2.6E-15 T 23-04-2016 CYCME_RS00780 66dc5c5ff07361c0b5ec6b15dd242982 160 Gene3D G3DSA:3.10.50.40 2 80 2.6E-15 T 23-04-2016 CYCME_RS00780 66dc5c5ff07361c0b5ec6b15dd242982 160 PANTHER PTHR10516:SF316 129 160 8.3E-36 T 23-04-2016 CYCME_RS00780 66dc5c5ff07361c0b5ec6b15dd242982 160 PANTHER PTHR10516:SF316 1 83 8.3E-36 T 23-04-2016 CYCME_RS00780 66dc5c5ff07361c0b5ec6b15dd242982 160 SUPERFAMILY SSF54534 2 140 5.5E-28 T 23-04-2016 CYCME_RS00780 66dc5c5ff07361c0b5ec6b15dd242982 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 3.7E-10 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CYCME_RS10120 d9b9e3af6a9462721205ac19abf75ffc 401 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 4 396 8.9E-171 T 23-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CYCME_RS10120 d9b9e3af6a9462721205ac19abf75ffc 401 PIRSF PIRSF016055 2 401 3.9E-193 T 23-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CYCME_RS10120 d9b9e3af6a9462721205ac19abf75ffc 401 PANTHER PTHR30578:SF1 4 401 7.2E-220 T 23-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CYCME_RS10120 d9b9e3af6a9462721205ac19abf75ffc 401 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 3 400 37.26 T 23-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CYCME_RS10120 d9b9e3af6a9462721205ac19abf75ffc 401 PANTHER PTHR30578 4 401 7.2E-220 T 23-04-2016 CYCME_RS10120 d9b9e3af6a9462721205ac19abf75ffc 401 Pfam PF03116 NQR2, RnfD, RnfE family 43 393 2.5E-105 T 23-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CYCME_RS11475 1cb7f7e7469f45a00746f47b959da297 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 261 5.0E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS11475 1cb7f7e7469f45a00746f47b959da297 270 Gene3D G3DSA:1.10.3720.10 8 268 2.2E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS11475 1cb7f7e7469f45a00746f47b959da297 270 SUPERFAMILY SSF161098 16 260 3.46E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS11475 1cb7f7e7469f45a00746f47b959da297 270 PANTHER PTHR30425:SF0 2 268 6.0E-95 T 23-04-2016 CYCME_RS11475 1cb7f7e7469f45a00746f47b959da297 270 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 267 5.2E-76 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CYCME_RS11475 1cb7f7e7469f45a00746f47b959da297 270 PANTHER PTHR30425 2 268 6.0E-95 T 23-04-2016 CYCME_RS06805 fa8d33a3fd050a9f5db5d597a6e4273d 917 Pfam PF11739 Dicarboxylate transport 699 898 2.2E-41 T 23-04-2016 IPR021730 Dicarboxylate transport CYCME_RS00895 1534214ac9343c2d48e9872cf790be0c 203 SUPERFAMILY SSF52218 4 195 1.65E-59 T 23-04-2016 IPR029039 Flavoprotein-like domain CYCME_RS00895 1534214ac9343c2d48e9872cf790be0c 203 Gene3D G3DSA:3.40.50.360 1 196 1.3E-65 T 23-04-2016 IPR029039 Flavoprotein-like domain CYCME_RS00895 1534214ac9343c2d48e9872cf790be0c 203 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 196 1.0E-46 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CYCME_RS00895 1534214ac9343c2d48e9872cf790be0c 203 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CYCME_RS00895 1534214ac9343c2d48e9872cf790be0c 203 PANTHER PTHR30546 1 196 1.7E-73 T 23-04-2016 CYCME_RS00895 1534214ac9343c2d48e9872cf790be0c 203 Pfam PF03358 NADPH-dependent FMN reductase 12 129 2.7E-10 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 SUPERFAMILY SSF46785 260 333 2.59E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 PANTHER PTHR13779:SF25 1 336 2.9E-184 T 23-04-2016 CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 336 2.0E-31 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 Gene3D G3DSA:1.10.10.10 260 331 1.4E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 PANTHER PTHR13779 1 336 2.9E-184 T 23-04-2016 CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 SUPERFAMILY SSF52540 23 254 2.37E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 Gene3D G3DSA:1.10.8.60 186 258 4.7E-32 T 23-04-2016 CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 348 178.891 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 4.4E-146 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 1.4E-116 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 SMART SM00382 54 181 2.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 Gene3D G3DSA:3.40.50.300 23 178 4.9E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS10565 1efb5321e34795bedb3ef3f924f86340 348 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.6E-33 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 SUPERFAMILY SSF55424 336 448 1.72E-33 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 448 4.6E-33 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-30 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.3E-30 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 5.3E-30 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.3E-30 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.3E-30 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 SUPERFAMILY SSF51905 1 360 9.18E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PIRSF PIRSF000350 1 448 1.4E-91 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 Gene3D G3DSA:3.30.390.30 339 448 3.7E-42 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 Gene3D G3DSA:3.50.50.60 138 326 2.3E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 Gene3D G3DSA:3.50.50.60 2 137 1.2E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PANTHER PTHR22912 1 448 3.8E-238 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PANTHER PTHR22912:SF106 1 448 3.8E-238 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 448 5.5E-198 T 23-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 1.7E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 3.2E-71 T 23-04-2016 CYCME_RS05300 744af5aee1b7f3f5ba834f33b3dc51eb 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 345 1.5E-135 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 347 49.837 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 PANTHER PTHR21091 1 347 1.2E-152 T 23-04-2016 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 345 4.5E-144 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 PANTHER PTHR21091:SF2 1 347 1.2E-152 T 23-04-2016 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 SUPERFAMILY SSF51726 1 350 1.26E-122 T 23-04-2016 CYCME_RS00330 68cd222a5849025c096ca0bf7b14ba21 352 Gene3D G3DSA:3.20.20.210 3 347 5.1E-156 T 23-04-2016 CYCME_RS08015 3731a09dcd4ebab1f7a8e1a963381846 145 Pfam PF00075 RNase H 4 141 7.8E-49 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CYCME_RS08015 3731a09dcd4ebab1f7a8e1a963381846 145 Hamap MF_00042 Ribonuclease H [rnhA]. 3 145 30.444 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 CYCME_RS08015 3731a09dcd4ebab1f7a8e1a963381846 145 PANTHER PTHR10642 5 143 1.1E-54 T 23-04-2016 CYCME_RS08015 3731a09dcd4ebab1f7a8e1a963381846 145 SUPERFAMILY SSF53098 4 143 2.15E-57 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS08015 3731a09dcd4ebab1f7a8e1a963381846 145 Gene3D G3DSA:3.30.420.10 4 143 2.1E-59 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS09540 b20ce9e7a38ab6ecaf9fd6ee74e215a9 539 Gene3D G3DSA:3.30.1490.20 97 170 4.3E-6 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS09540 b20ce9e7a38ab6ecaf9fd6ee74e215a9 539 Gene3D G3DSA:3.30.470.20 171 244 1.1E-12 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS09540 b20ce9e7a38ab6ecaf9fd6ee74e215a9 539 SUPERFAMILY SSF56059 87 262 1.94E-34 T 23-04-2016 CYCME_RS09540 b20ce9e7a38ab6ecaf9fd6ee74e215a9 539 PANTHER PTHR21621 105 256 2.2E-26 T 23-04-2016 CYCME_RS09540 b20ce9e7a38ab6ecaf9fd6ee74e215a9 539 Pfam PF07799 Protein of unknown function (DUF1643) 400 524 1.1E-26 T 23-04-2016 IPR012441 Protein of unknown function DUF1643 CYCME_RS09540 b20ce9e7a38ab6ecaf9fd6ee74e215a9 539 Pfam PF08443 RimK-like ATP-grasp domain 103 252 9.6E-17 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type CYCME_RS03235 4c27d54854909e25800f3239be6f5cda 310 PANTHER PTHR24220 6 241 2.0E-77 T 23-04-2016 CYCME_RS03235 4c27d54854909e25800f3239be6f5cda 310 Pfam PF00005 ABC transporter 21 163 7.7E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS03235 4c27d54854909e25800f3239be6f5cda 310 PANTHER PTHR24220:SF432 6 241 2.0E-77 T 23-04-2016 CYCME_RS03235 4c27d54854909e25800f3239be6f5cda 310 SUPERFAMILY SSF52540 4 222 2.55E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03235 4c27d54854909e25800f3239be6f5cda 310 Gene3D G3DSA:3.40.50.300 2 227 4.6E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03235 4c27d54854909e25800f3239be6f5cda 310 SMART SM00382 29 212 8.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS07650 89cff4e8e7063dadc128a977bd5b0828 149 Pfam PF07977 FabA-like domain 13 138 4.2E-37 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CYCME_RS07650 89cff4e8e7063dadc128a977bd5b0828 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 5 143 2.1E-57 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CYCME_RS07650 89cff4e8e7063dadc128a977bd5b0828 149 PANTHER PTHR30272 5 148 2.8E-69 T 23-04-2016 CYCME_RS07650 89cff4e8e7063dadc128a977bd5b0828 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 146 33.647 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CYCME_RS07650 89cff4e8e7063dadc128a977bd5b0828 149 Gene3D G3DSA:3.10.129.10 5 144 6.0E-53 T 23-04-2016 IPR029069 HotDog domain CYCME_RS07650 89cff4e8e7063dadc128a977bd5b0828 149 SUPERFAMILY SSF54637 5 143 1.63E-45 T 23-04-2016 IPR029069 HotDog domain CYCME_RS02965 2b3750feaa99ada7a3a80094fb06bb4d 100 SUPERFAMILY SSF54909 1 99 1.23E-31 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CYCME_RS02965 2b3750feaa99ada7a3a80094fb06bb4d 100 Gene3D G3DSA:3.30.70.900 1 99 2.9E-33 T 23-04-2016 CYCME_RS02965 2b3750feaa99ada7a3a80094fb06bb4d 100 PANTHER PTHR34474 1 99 3.3E-28 T 23-04-2016 CYCME_RS02965 2b3750feaa99ada7a3a80094fb06bb4d 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 2.4E-18 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain CYCME_RS02965 2b3750feaa99ada7a3a80094fb06bb4d 100 PANTHER PTHR34474:SF2 1 99 3.3E-28 T 23-04-2016 CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 Gene3D G3DSA:3.30.70.270 167 326 5.1E-50 T 23-04-2016 CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 Gene3D G3DSA:3.30.450.20 21 162 6.8E-14 T 23-04-2016 CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 PANTHER PTHR10799:SF686 74 120 2.3E-23 T 23-04-2016 CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 PANTHER PTHR10799:SF686 198 327 2.3E-23 T 23-04-2016 CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 SMART SM00267 154 326 6.4E-54 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 Pfam PF13426 PAS domain 30 146 2.7E-6 T 23-04-2016 IPR000014 PAS domain CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 SUPERFAMILY SSF55073 170 325 2.04E-44 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 SUPERFAMILY SSF55785 21 138 7.42E-8 T 23-04-2016 IPR000014 PAS domain CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 326 7.6E-50 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 322 1.6E-44 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 PANTHER PTHR10799 74 120 2.3E-23 T 23-04-2016 CYCME_RS10720 89fff754124f66c3c6540b9a195f305b 327 PANTHER PTHR10799 198 327 2.3E-23 T 23-04-2016 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 SUPERFAMILY SSF53383 14 435 1.19E-133 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 13 436 104.042 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 280 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 15 435 2.0E-190 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 Pfam PF00202 Aminotransferase class-III 44 406 1.1E-78 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 Gene3D G3DSA:3.90.1150.10 14 79 2.2E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 Gene3D G3DSA:3.90.1150.10 329 435 2.2E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 PANTHER PTHR11986:SF5 17 436 7.7E-225 T 23-04-2016 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 Gene3D G3DSA:3.40.640.10 80 326 1.8E-83 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS02860 7863e6928e7dbc2a476cd63929feefd7 437 PANTHER PTHR11986 17 436 7.7E-225 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PANTHER PTHR24322:SF330 159 190 8.1E-45 T 23-04-2016 CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PANTHER PTHR24322:SF330 12 142 8.1E-45 T 23-04-2016 CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PANTHER PTHR24322 159 190 8.1E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PANTHER PTHR24322 12 142 8.1E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 Gene3D G3DSA:3.40.50.720 2 251 1.7E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 2.0E-68 T 23-04-2016 CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01245 9a19e3f6a29753aa917a0fc36c9d929b 252 SUPERFAMILY SSF51735 6 251 1.55E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09000 38cdc0b0ceb69b198ed24e20429683ac 217 PANTHER PTHR22939:SF104 36 208 1.5E-42 T 23-04-2016 CYCME_RS09000 38cdc0b0ceb69b198ed24e20429683ac 217 PANTHER PTHR22939 36 208 1.5E-42 T 23-04-2016 CYCME_RS10475 406a00725d4eecd583ec94b3f4ce5902 205 Gene3D G3DSA:3.30.70.1210 79 203 8.7E-26 T 23-04-2016 CYCME_RS10475 406a00725d4eecd583ec94b3f4ce5902 205 SUPERFAMILY SSF117987 1 63 1.18E-10 T 23-04-2016 CYCME_RS10475 406a00725d4eecd583ec94b3f4ce5902 205 Pfam PF08798 CRISPR associated protein 12 203 3.8E-47 T 23-04-2016 IPR010179 CRISPR-associated protein Cse3 CYCME_RS10475 406a00725d4eecd583ec94b3f4ce5902 205 SUPERFAMILY SSF117987 79 203 1.57E-26 T 23-04-2016 CYCME_RS10475 406a00725d4eecd583ec94b3f4ce5902 205 SMART SM01101 1 204 1.0E-56 T 23-04-2016 IPR010179 CRISPR-associated protein Cse3 CYCME_RS10475 406a00725d4eecd583ec94b3f4ce5902 205 Gene3D G3DSA:3.30.70.1200 14 63 4.3E-8 T 23-04-2016 CYCME_RS10475 406a00725d4eecd583ec94b3f4ce5902 205 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 2 203 6.2E-49 T 23-04-2016 IPR010179 CRISPR-associated protein Cse3 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 SUPERFAMILY SSF52540 199 367 9.19E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 12 360 1.0E-153 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 PANTHER PTHR10229 1 400 2.0E-162 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 Pfam PF13167 GTP-binding GTPase N-terminal 27 114 2.0E-30 T 23-04-2016 IPR025121 GTPase HflX, N-terminal CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 Pfam PF16360 GTP-binding GTPase Middle Region 116 194 2.9E-28 T 23-04-2016 IPR032305 GTP-binding protein, middle domain CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 Pfam PF01926 50S ribosome-binding GTPase 202 320 3.3E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 5.2E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 241 5.2E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 269 287 5.2E-10 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 PIRSF PIRSF006809 5 418 7.3E-145 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 PANTHER PTHR10229:SF0 1 400 2.0E-162 T 23-04-2016 CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 Gene3D G3DSA:3.40.50.300 200 364 5.6E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04465 5b7ac507b98968b85593c4ff113d183f 419 Hamap MF_00900 GTPase HflX [hflX]. 29 392 46.447 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CYCME_RS03810 b294870d170a7f9d29aeb68388fe34be 264 Gene3D G3DSA:2.40.50.90 45 171 1.0E-26 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CYCME_RS03810 b294870d170a7f9d29aeb68388fe34be 264 SMART SM00318 41 170 1.6E-16 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CYCME_RS03810 b294870d170a7f9d29aeb68388fe34be 264 SUPERFAMILY SSF50199 46 170 2.22E-31 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CYCME_RS03810 b294870d170a7f9d29aeb68388fe34be 264 PANTHER PTHR12302:SF0 46 175 3.3E-33 T 23-04-2016 CYCME_RS03810 b294870d170a7f9d29aeb68388fe34be 264 PANTHER PTHR12302 46 175 3.3E-33 T 23-04-2016 CYCME_RS03810 b294870d170a7f9d29aeb68388fe34be 264 Pfam PF00565 Staphylococcal nuclease homologue 63 169 7.6E-21 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CYCME_RS04710 cc0bbb7cd39ed176db80ae95a86d4860 146 SUPERFAMILY SSF57716 107 144 2.57E-9 T 23-04-2016 CYCME_RS04710 cc0bbb7cd39ed176db80ae95a86d4860 146 SUPERFAMILY SSF109635 14 106 7.59E-32 T 23-04-2016 CYCME_RS04710 cc0bbb7cd39ed176db80ae95a86d4860 146 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 105 136 1.0E-11 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CYCME_RS04710 cc0bbb7cd39ed176db80ae95a86d4860 146 PANTHER PTHR33823 4 146 5.0E-57 T 23-04-2016 CYCME_RS04710 cc0bbb7cd39ed176db80ae95a86d4860 146 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 28 136 2.3E-49 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CYCME_RS04710 cc0bbb7cd39ed176db80ae95a86d4860 146 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 110 134 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CYCME_RS04710 cc0bbb7cd39ed176db80ae95a86d4860 146 PANTHER PTHR33823:SF2 4 146 5.0E-57 T 23-04-2016 CYCME_RS04710 cc0bbb7cd39ed176db80ae95a86d4860 146 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 24 146 27.736 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CYCME_RS00580 786bdd11d4fc267154044ee57b4588e3 505 PANTHER PTHR23513:SF7 3 405 1.2E-94 T 23-04-2016 CYCME_RS00580 786bdd11d4fc267154044ee57b4588e3 505 Gene3D G3DSA:1.20.1250.20 203 376 1.9E-14 T 23-04-2016 CYCME_RS00580 786bdd11d4fc267154044ee57b4588e3 505 SUPERFAMILY SSF103473 3 377 2.88E-40 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS00580 786bdd11d4fc267154044ee57b4588e3 505 Gene3D G3DSA:1.20.1250.20 23 185 7.8E-16 T 23-04-2016 CYCME_RS00580 786bdd11d4fc267154044ee57b4588e3 505 Pfam PF05977 Transmembrane secretion effector 2 501 1.3E-143 T 23-04-2016 IPR010290 Transmembrane secretion effector CYCME_RS00580 786bdd11d4fc267154044ee57b4588e3 505 PANTHER PTHR23513 3 405 1.2E-94 T 23-04-2016 CYCME_RS09775 97e350e86e162f9c2262363ba3be3917 186 PANTHER PTHR39206 1 186 9.1E-34 T 23-04-2016 CYCME_RS09775 97e350e86e162f9c2262363ba3be3917 186 Gene3D G3DSA:3.40.50.300 2 128 1.9E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09775 97e350e86e162f9c2262363ba3be3917 186 PANTHER PTHR39206:SF1 1 186 9.1E-34 T 23-04-2016 CYCME_RS09775 97e350e86e162f9c2262363ba3be3917 186 SUPERFAMILY SSF52540 1 126 1.3E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09775 97e350e86e162f9c2262363ba3be3917 186 Pfam PF13671 AAA domain 2 117 1.3E-10 T 23-04-2016 CYCME_RS05985 8d74adeead521971292f0578956619f9 256 Gene3D G3DSA:3.40.50.720 3 251 1.1E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.0E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.0E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.0E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.0E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.0E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 SUPERFAMILY SSF51735 4 249 1.51E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PANTHER PTHR24322:SF356 10 146 1.6E-53 T 23-04-2016 CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PANTHER PTHR24322:SF356 162 198 1.6E-53 T 23-04-2016 CYCME_RS05985 8d74adeead521971292f0578956619f9 256 Pfam PF00106 short chain dehydrogenase 7 206 6.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PANTHER PTHR24322 10 146 1.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PANTHER PTHR24322 162 198 1.6E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 7.2E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 7.2E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 7.2E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05985 8d74adeead521971292f0578956619f9 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS00195 cbce6e9ae1f98185a9e996c730d11cbe 255 Pfam PF04748 Divergent polysaccharide deacetylase 30 238 2.8E-76 T 23-04-2016 IPR006837 Protein of unknown function DUF610, YibQ CYCME_RS00195 cbce6e9ae1f98185a9e996c730d11cbe 255 SUPERFAMILY SSF88713 27 238 6.12E-67 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CYCME_RS00195 cbce6e9ae1f98185a9e996c730d11cbe 255 Gene3D G3DSA:3.20.20.370 23 245 2.0E-83 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CYCME_RS00195 cbce6e9ae1f98185a9e996c730d11cbe 255 PANTHER PTHR30105 27 244 2.6E-70 T 23-04-2016 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 Gene3D G3DSA:1.10.443.10 100 305 9.6E-46 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 PANTHER PTHR30349 2 175 2.2E-105 T 23-04-2016 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 PANTHER PTHR30349 193 315 2.2E-105 T 23-04-2016 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 TIGRFAM TIGR02249 integrase_gron: integron integrase 1 314 8.2E-132 T 23-04-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 2 83 1.3E-24 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 Gene3D G3DSA:1.10.150.130 11 75 6.3E-4 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 PANTHER PTHR30349:SF28 2 175 2.2E-105 T 23-04-2016 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 PANTHER PTHR30349:SF28 193 315 2.2E-105 T 23-04-2016 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 SUPERFAMILY SSF56349 5 303 1.41E-45 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS00740 02b361b3bb4ebcbf9bc1e39baa512e9e 319 Pfam PF00589 Phage integrase family 100 301 6.8E-44 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS06005 2adb32cede76b2cd0db80a9c2eb9365e 133 SUPERFAMILY SSF161084 3 125 1.44E-18 T 23-04-2016 CYCME_RS06005 2adb32cede76b2cd0db80a9c2eb9365e 133 PANTHER PTHR35371 1 130 1.2E-12 T 23-04-2016 CYCME_RS06005 2adb32cede76b2cd0db80a9c2eb9365e 133 Gene3D G3DSA:1.20.120.550 4 130 8.0E-13 T 23-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CYCME_RS06005 2adb32cede76b2cd0db80a9c2eb9365e 133 PANTHER PTHR35371:SF1 1 130 1.2E-12 T 23-04-2016 CYCME_RS06005 2adb32cede76b2cd0db80a9c2eb9365e 133 Pfam PF01124 MAPEG family 6 128 3.2E-16 T 23-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 Pfam PF02142 MGS-like domain 17 130 1.2E-28 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 5 520 45.02 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 SUPERFAMILY SSF52335 5 193 1.57E-69 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 PANTHER PTHR11692:SF2 3 520 0.0 T 23-04-2016 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 451 8.8E-117 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 SMART SM00798 135 452 8.6E-202 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 PANTHER PTHR11692 3 520 0.0 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 Gene3D G3DSA:3.40.50.1380 4 187 1.6E-82 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 Gene3D G3DSA:3.40.140.20 244 363 8.3E-49 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 SMART SM00851 17 130 1.4E-59 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 Gene3D G3DSA:3.40.140.20 370 510 5.4E-57 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 520 2.8E-232 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 SUPERFAMILY SSF53927 212 520 3.71E-129 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CYCME_RS02910 414d18a4654fa30dc8e5559e566748ae 520 PIRSF PIRSF000414 1 520 4.7E-224 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CYCME_RS06705 469bafbb3bab4a2155b406c659de6305 228 PANTHER PTHR24220:SF578 4 218 8.8E-67 T 23-04-2016 CYCME_RS06705 469bafbb3bab4a2155b406c659de6305 228 Pfam PF00005 ABC transporter 25 172 1.3E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS06705 469bafbb3bab4a2155b406c659de6305 228 Gene3D G3DSA:3.40.50.300 2 209 3.6E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06705 469bafbb3bab4a2155b406c659de6305 228 PANTHER PTHR24220 4 218 8.8E-67 T 23-04-2016 CYCME_RS06705 469bafbb3bab4a2155b406c659de6305 228 SUPERFAMILY SSF52540 3 209 5.33E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06705 469bafbb3bab4a2155b406c659de6305 228 SMART SM00382 30 220 1.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 SUPERFAMILY SSF54631 135 271 2.53E-16 T 23-04-2016 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 Gene3D G3DSA:1.10.357.20 273 444 1.7E-48 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 Gene3D G3DSA:3.10.580.10 136 249 6.7E-10 T 23-04-2016 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 444 6.0E-73 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 Gene3D G3DSA:1.25.60.10 6 129 3.0E-11 T 23-04-2016 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 SMART SM00924 31 134 2.1E-14 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 PANTHER PTHR41394 6 434 4.2E-89 T 23-04-2016 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 PANTHER PTHR41394:SF1 6 434 4.2E-89 T 23-04-2016 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 SUPERFAMILY SSF158791 6 130 8.76E-15 T 23-04-2016 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 Pfam PF03448 MgtE intracellular N domain 35 132 2.5E-17 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 Pfam PF01769 Divalent cation transporter 316 437 2.0E-23 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CYCME_RS09505 fb184ad4bc53f0ac55a9263247f574fa 445 SUPERFAMILY SSF161093 273 444 7.59E-46 T 23-04-2016 CYCME_RS03405 6c5f61c1f352969c9118abab16b97caa 332 Gene3D G3DSA:3.40.718.10 3 325 3.1E-128 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CYCME_RS03405 6c5f61c1f352969c9118abab16b97caa 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 323 1.5E-124 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CYCME_RS03405 6c5f61c1f352969c9118abab16b97caa 332 PANTHER PTHR30004:SF5 1 327 4.6E-170 T 23-04-2016 CYCME_RS03405 6c5f61c1f352969c9118abab16b97caa 332 SUPERFAMILY SSF53659 4 325 5.12E-107 T 23-04-2016 CYCME_RS03405 6c5f61c1f352969c9118abab16b97caa 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 319 2.9E-103 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CYCME_RS03405 6c5f61c1f352969c9118abab16b97caa 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 323 33.179 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CYCME_RS03405 6c5f61c1f352969c9118abab16b97caa 332 PANTHER PTHR30004 1 327 4.6E-170 T 23-04-2016 CYCME_RS03680 5a8ada398ac53794d9865dc3a51d6a40 111 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 2.7E-30 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03680 5a8ada398ac53794d9865dc3a51d6a40 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 25.88 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03680 5a8ada398ac53794d9865dc3a51d6a40 111 Gene3D G3DSA:3.90.470.10 1 110 1.1E-38 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03680 5a8ada398ac53794d9865dc3a51d6a40 111 PANTHER PTHR13501 1 111 1.1E-41 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03680 5a8ada398ac53794d9865dc3a51d6a40 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03680 5a8ada398ac53794d9865dc3a51d6a40 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.3E-38 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03680 5a8ada398ac53794d9865dc3a51d6a40 111 SUPERFAMILY SSF54843 1 110 6.54E-39 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CYCME_RS07585 f5f926215885920089c021eca9b6619c 348 PANTHER PTHR13326 1 343 1.2E-51 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07585 f5f926215885920089c021eca9b6619c 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 8 345 26.405 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07585 f5f926215885920089c021eca9b6619c 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 191 340 1.9E-23 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07585 f5f926215885920089c021eca9b6619c 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 19 171 4.3E-37 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07585 f5f926215885920089c021eca9b6619c 348 SUPERFAMILY SSF55120 6 343 1.73E-85 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS07585 f5f926215885920089c021eca9b6619c 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 80 93 - T 23-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 SUPERFAMILY SSF54686 1 133 1.83E-54 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.244 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 Gene3D G3DSA:3.90.1170.10 23 134 1.1E-51 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 3.1E-57 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 6.9E-48 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 PANTHER PTHR12220 1 137 7.1E-70 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 6.8E-37 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 6.8E-37 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 6.8E-37 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CYCME_RS03690 4e5220de8cd418175da175716eecbe01 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 6.8E-37 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CYCME_RS00455 ce8de109472d52ac4edda2f90b807d3b 142 PANTHER PTHR30574:SF1 2 138 7.9E-31 T 23-04-2016 CYCME_RS00455 ce8de109472d52ac4edda2f90b807d3b 142 Pfam PF04143 Sulphur transport 17 130 1.7E-8 T 23-04-2016 IPR007272 Sulphur transport domain CYCME_RS00455 ce8de109472d52ac4edda2f90b807d3b 142 PANTHER PTHR30574 2 138 7.9E-31 T 23-04-2016 CYCME_RS01800 8bdc49add252e894a605802b4bd2d3a7 211 PANTHER PTHR38693 11 205 7.8E-41 T 23-04-2016 CYCME_RS01800 8bdc49add252e894a605802b4bd2d3a7 211 SUPERFAMILY SSF55718 11 119 2.24E-8 T 23-04-2016 IPR003033 SCP2 sterol-binding domain CYCME_RS01800 8bdc49add252e894a605802b4bd2d3a7 211 Pfam PF02036 SCP-2 sterol transfer family 16 112 1.5E-11 T 23-04-2016 IPR003033 SCP2 sterol-binding domain CYCME_RS01800 8bdc49add252e894a605802b4bd2d3a7 211 PANTHER PTHR38693:SF1 11 205 7.8E-41 T 23-04-2016 CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 PANTHER PTHR18895:SF62 429 696 4.8E-97 T 23-04-2016 CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 SUPERFAMILY SSF53335 424 733 9.17E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 529 691 2.0E-21 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 PANTHER PTHR18895 429 696 4.8E-97 T 23-04-2016 CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 Pfam PF02926 THUMP domain 36 156 5.6E-14 T 23-04-2016 IPR004114 THUMP domain GO:0003723 CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 734 31.672 T 23-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 SUPERFAMILY SSF53335 264 377 2.81E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 SUPERFAMILY SSF53335 147 224 2.81E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 PIRSF PIRSF037618 2 734 2.0E-300 T 23-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 SMART SM00981 59 157 1.3E-19 T 23-04-2016 IPR004114 THUMP domain GO:0003723 CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 Gene3D G3DSA:3.40.50.150 148 221 5.1E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 Gene3D G3DSA:3.40.50.150 261 378 5.1E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 Gene3D G3DSA:3.40.50.150 460 733 6.3E-74 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02450 2f2c6de8d04d94bc355fc00ee5f2618e 734 Pfam PF01170 Putative RNA methylase family UPF0020 165 378 1.1E-39 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS06240 98c7eb7f7763024680f0a90cc49799f2 411 SUPERFAMILY SSF56349 149 400 1.91E-25 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS06240 98c7eb7f7763024680f0a90cc49799f2 411 SUPERFAMILY SSF56349 46 100 1.91E-25 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS06240 98c7eb7f7763024680f0a90cc49799f2 411 PANTHER PTHR30349 151 404 2.0E-15 T 23-04-2016 CYCME_RS06240 98c7eb7f7763024680f0a90cc49799f2 411 Gene3D G3DSA:1.10.443.10 202 402 1.2E-21 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS06240 98c7eb7f7763024680f0a90cc49799f2 411 Gene3D G3DSA:1.10.150.130 46 100 8.1E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CYCME_RS06240 98c7eb7f7763024680f0a90cc49799f2 411 Gene3D G3DSA:1.10.150.130 148 181 8.1E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CYCME_RS06240 98c7eb7f7763024680f0a90cc49799f2 411 Pfam PF00589 Phage integrase family 262 398 2.3E-9 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS09965 be44a06e6e13c30f75df8b196c257d6b 99 Pfam PF07238 PilZ domain 7 85 7.8E-5 T 23-04-2016 IPR009875 PilZ domain GO:0035438 CYCME_RS09965 be44a06e6e13c30f75df8b196c257d6b 99 SUPERFAMILY SSF141371 3 80 2.08E-5 T 23-04-2016 CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 Gene3D G3DSA:3.40.50.720 287 473 7.0E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 Pfam PF02719 Polysaccharide biosynthesis protein 289 583 5.0E-128 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 Gene3D G3DSA:3.40.50.720 146 224 9.4E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 Gene3D G3DSA:3.90.25.10 474 560 6.7E-8 T 23-04-2016 CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 Pfam PF13727 CoA-binding domain 81 244 5.6E-8 T 23-04-2016 CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 SUPERFAMILY SSF51735 287 591 2.07E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 PANTHER PTHR10366 288 613 1.0E-118 T 23-04-2016 CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 PANTHER PTHR10366:SF256 288 613 1.0E-118 T 23-04-2016 CYCME_RS02295 78e101440a3cd80e0898dec91c69b688 633 SUPERFAMILY SSF53335 113 340 4.65E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS06845 ae0e5071dc971d57594ac3bd5ca4363e 365 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 62 232 2.2E-32 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 CYCME_RS06845 ae0e5071dc971d57594ac3bd5ca4363e 365 Pfam PF13466 STAS domain 279 354 3.9E-7 T 23-04-2016 IPR002645 STAS domain CYCME_RS06845 ae0e5071dc971d57594ac3bd5ca4363e 365 SUPERFAMILY SSF52091 278 364 1.33E-11 T 23-04-2016 IPR002645 STAS domain CYCME_RS06845 ae0e5071dc971d57594ac3bd5ca4363e 365 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 63 232 2.9E-47 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 CYCME_RS06845 ae0e5071dc971d57594ac3bd5ca4363e 365 PANTHER PTHR34136:SF1 1 248 5.5E-62 T 23-04-2016 CYCME_RS06845 ae0e5071dc971d57594ac3bd5ca4363e 365 PANTHER PTHR34136 1 248 5.5E-62 T 23-04-2016 CYCME_RS06845 ae0e5071dc971d57594ac3bd5ca4363e 365 Gene3D G3DSA:3.30.750.24 279 364 1.8E-11 T 23-04-2016 IPR002645 STAS domain CYCME_RS07855 457db21b0636695a9b0e2ec7d6347987 113 Pfam PF00085 Thioredoxin 20 106 5.3E-11 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CYCME_RS07855 457db21b0636695a9b0e2ec7d6347987 113 Gene3D G3DSA:3.40.30.10 19 109 4.3E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS07855 457db21b0636695a9b0e2ec7d6347987 113 SUPERFAMILY SSF52833 22 108 4.45E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Gene3D G3DSA:3.40.50.10070 24 151 6.1E-48 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 PANTHER PTHR11731:SF123 160 430 1.8E-89 T 23-04-2016 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 PANTHER PTHR11731:SF123 1 123 1.8E-89 T 23-04-2016 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Pfam PF04052 TolB amino-terminal domain 24 129 1.0E-31 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Hamap MF_00671 Protein TolB [tolB]. 5 428 35.363 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 PANTHER PTHR11731 160 430 1.8E-89 T 23-04-2016 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 PANTHER PTHR11731 1 123 1.8E-89 T 23-04-2016 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 429 9.4E-159 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Pfam PF07676 WD40-like Beta Propeller Repeat 195 229 0.0043 T 23-04-2016 IPR011659 WD40-like Beta Propeller CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Pfam PF07676 WD40-like Beta Propeller Repeat 283 318 7.4E-13 T 23-04-2016 IPR011659 WD40-like Beta Propeller CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Pfam PF07676 WD40-like Beta Propeller Repeat 373 396 0.044 T 23-04-2016 IPR011659 WD40-like Beta Propeller CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Pfam PF07676 WD40-like Beta Propeller Repeat 328 360 0.0045 T 23-04-2016 IPR011659 WD40-like Beta Propeller CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Pfam PF07676 WD40-like Beta Propeller Repeat 244 274 7.2E-7 T 23-04-2016 IPR011659 WD40-like Beta Propeller CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 SUPERFAMILY SSF52964 29 161 9.15E-39 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 Gene3D G3DSA:2.130.10.10 152 430 1.3E-72 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS10540 b9bf48dc61e10252a90b3beb0ea21e9a 432 SUPERFAMILY SSF69304 154 430 1.57E-54 T 23-04-2016 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 PRINTS PR00125 ATP synthase delta subunit signature 75 86 3.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 PRINTS PR00125 ATP synthase delta subunit signature 151 169 3.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 PRINTS PR00125 ATP synthase delta subunit signature 136 151 3.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 PRINTS PR00125 ATP synthase delta subunit signature 86 100 3.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 7.0E-44 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 5.0E-51 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 SUPERFAMILY SSF47928 3 104 1.31E-22 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CYCME_RS12300 484963c989ca108a49d08315829410e5 177 Gene3D G3DSA:1.10.520.20 2 104 1.2E-27 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CYCME_RS12300 484963c989ca108a49d08315829410e5 177 PANTHER PTHR11910 8 177 2.9E-46 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 PANTHER PTHR11910:SF1 8 177 2.9E-46 T 23-04-2016 CYCME_RS12300 484963c989ca108a49d08315829410e5 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 16.309 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 240.858 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 Gene3D G3DSA:1.10.720.10 1 46 3.0E-15 T 23-04-2016 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 PANTHER PTHR15184 54 402 3.3E-187 T 23-04-2016 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 SMART SM00959 5 47 3.2E-10 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 SMART SM00382 170 355 1.5E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 SUPERFAMILY SSF68912 1 46 1.49E-8 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 SMART SM00357 52 118 1.8E-19 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 SUPERFAMILY SSF52540 90 371 7.8E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 9.7E-210 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 SUPERFAMILY SSF50249 48 125 9.0E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 Gene3D G3DSA:3.40.50.300 131 417 1.6E-104 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 Gene3D G3DSA:2.40.50.140 49 117 1.5E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.4E-22 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 3.5E-10 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 PANTHER PTHR15184:SF34 54 402 3.3E-187 T 23-04-2016 CYCME_RS02900 f9c51ac99253d81023df84e812474207 418 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.0E-30 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 Gene3D G3DSA:3.30.9.10 202 302 7.1E-18 T 23-04-2016 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 SUPERFAMILY SSF51905 1 217 4.92E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 SUPERFAMILY SSF51905 304 360 4.92E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 PANTHER PTHR13847 3 360 2.6E-71 T 23-04-2016 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 Gene3D G3DSA:3.50.50.60 1 81 1.3E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 Gene3D G3DSA:3.50.50.60 304 360 1.3E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 Gene3D G3DSA:3.50.50.60 135 201 1.3E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 Pfam PF01266 FAD dependent oxidoreductase 3 342 1.0E-62 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 PANTHER PTHR13847:SF180 3 360 2.6E-71 T 23-04-2016 CYCME_RS10660 19e8833e6a27fa0381c39b8658b5ce71 360 SUPERFAMILY SSF54373 217 304 3.53E-18 T 23-04-2016 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 PANTHER PTHR21237 18 201 1.0E-61 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 Pfam PF01025 GrpE 37 198 4.9E-54 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 SUPERFAMILY SSF51064 143 199 3.92E-21 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 PRINTS PR00773 GrpE protein signature 67 83 1.59E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 PRINTS PR00773 GrpE protein signature 95 110 1.59E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 PRINTS PR00773 GrpE protein signature 177 196 1.59E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 PRINTS PR00773 GrpE protein signature 150 165 1.59E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 Hamap MF_01151 Protein GrpE [grpE]. 3 198 21.601 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 Gene3D G3DSA:3.90.20.20 43 140 1.1E-28 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 SUPERFAMILY SSF58014 47 142 1.57E-25 T 23-04-2016 CYCME_RS04925 887197eaa2b18557f7501291e23e8025 212 Gene3D G3DSA:2.30.22.10 142 200 1.7E-29 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 Gene3D G3DSA:2.60.40.1250 29 150 1.1E-36 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 ProSitePatterns PS00194 Thioredoxin family active site. 510 528 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 Gene3D G3DSA:3.40.30.10 489 599 3.4E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 PANTHER PTHR32234 37 602 4.3E-171 T 23-04-2016 CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 PANTHER PTHR32234:SF0 37 602 4.3E-171 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 SUPERFAMILY SSF52833 488 598 1.66E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 11 602 34.5 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 Pfam PF13899 Thioredoxin-like 491 575 2.3E-13 T 23-04-2016 CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 192 396 4.6E-18 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 SUPERFAMILY SSF74863 30 149 1.15E-30 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CYCME_RS02955 806de008a694bc6a7e5a7ee77f8bc568 602 Pfam PF11412 Disulphide bond corrector protein DsbC 31 148 1.5E-31 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 PANTHER PTHR23046 1 170 1.7E-70 T 23-04-2016 CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 Gene3D G3DSA:3.40.50.7700 3 166 5.2E-63 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 PIRSF PIRSF001338 3 168 6.4E-61 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 8 164 1.0E-57 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 SMART SM01001 6 157 5.9E-82 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 SUPERFAMILY SSF52255 7 166 5.62E-58 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 PANTHER PTHR23046:SF2 1 170 1.7E-70 T 23-04-2016 CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 Pfam PF00731 AIR carboxylase 8 152 5.9E-56 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CYCME_RS01615 6c9f09d476e6f21e221a5ae6f6dd1c56 171 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 8 161 29.523 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 SUPERFAMILY SSF51735 6 255 1.4E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 5.9E-66 T 23-04-2016 CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 Gene3D G3DSA:3.40.50.720 2 256 2.9E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PANTHER PTHR24321:SF6 2 256 5.8E-57 T 23-04-2016 CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.1E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PANTHER PTHR24321 2 256 5.8E-57 T 23-04-2016 CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 7.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS07895 89b221e21ab2c5e5753a217c7545060b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.4E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS08440 12eeeb34ea0420c03bdfe4cc15e38c84 226 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS08440 12eeeb34ea0420c03bdfe4cc15e38c84 226 SUPERFAMILY SSF52540 7 224 2.15E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08440 12eeeb34ea0420c03bdfe4cc15e38c84 226 PANTHER PTHR24220 8 226 3.8E-114 T 23-04-2016 CYCME_RS08440 12eeeb34ea0420c03bdfe4cc15e38c84 226 Pfam PF00005 ABC transporter 26 174 1.3E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS08440 12eeeb34ea0420c03bdfe4cc15e38c84 226 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 7 225 1.3E-101 T 23-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 CYCME_RS08440 12eeeb34ea0420c03bdfe4cc15e38c84 226 Gene3D G3DSA:3.40.50.300 5 224 1.8E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08440 12eeeb34ea0420c03bdfe4cc15e38c84 226 SMART SM00382 35 224 6.2E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS08440 12eeeb34ea0420c03bdfe4cc15e38c84 226 PANTHER PTHR24220:SF111 8 226 3.8E-114 T 23-04-2016 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 234 8.4E-43 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 375 1.1E-67 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 Gene3D G3DSA:3.30.300.10 134 236 2.9E-39 T 23-04-2016 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 SUPERFAMILY SSF55973 112 235 1.1E-48 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 385 2.6E-182 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 PANTHER PTHR11964 1 381 9.8E-252 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 PIRSF PIRSF000497 1 387 6.2E-170 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.5E-42 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 SUPERFAMILY SSF55973 236 385 1.53E-68 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.088 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 Gene3D G3DSA:3.30.300.10 12 133 7.9E-47 T 23-04-2016 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 Gene3D G3DSA:3.30.300.10 247 386 1.2E-68 T 23-04-2016 CYCME_RS01305 ebaa22d7dda94930c91ae5ec19fbaa3a 387 SUPERFAMILY SSF55973 4 111 2.43E-45 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 9 305 1.6E-27 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 Gene3D G3DSA:3.30.70.250 127 198 4.0E-29 T 23-04-2016 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 PIRSF PIRSF000446 3 312 1.3E-119 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 Gene3D G3DSA:3.40.366.10 3 124 1.8E-68 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 Gene3D G3DSA:3.40.366.10 199 299 1.8E-68 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 SUPERFAMILY SSF52151 6 124 1.36E-76 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 SUPERFAMILY SSF52151 192 310 1.36E-76 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 293 1.2E-111 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 SUPERFAMILY SSF55048 130 199 5.23E-17 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 Pfam PF00698 Acyl transferase domain 9 280 7.4E-31 T 23-04-2016 IPR014043 Acyl transferase CYCME_RS05380 8c5daed9dadacf3291b4ab560b40b990 312 PANTHER PTHR10982 5 310 3.4E-138 T 23-04-2016 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 ProSitePatterns PS00855 Signal peptidases II signature. 96 108 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 TIGRFAM TIGR00077 lspA: signal peptidase II 5 150 7.3E-42 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 8.2E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 8.2E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 8.2E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 Pfam PF01252 Signal peptidase (SPase) II 8 148 7.6E-43 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 PANTHER PTHR33695 4 153 7.4E-64 T 23-04-2016 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 154 17.983 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CYCME_RS09895 158de838337c8eec08f3cf0d709a4d52 157 PANTHER PTHR33695:SF1 4 153 7.4E-64 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 PANTHER PTHR13779:SF7 5 432 1.3E-195 T 23-04-2016 CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 PANTHER PTHR13779 5 432 1.3E-195 T 23-04-2016 CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 151 2.4E-15 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 SMART SM00382 40 157 4.0E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 Pfam PF12002 MgsA AAA+ ATPase C terminal 257 423 7.7E-67 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 Gene3D G3DSA:1.20.272.10 238 336 2.3E-44 T 23-04-2016 CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 Gene3D G3DSA:1.10.3710.10 337 431 4.9E-32 T 23-04-2016 CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 SUPERFAMILY SSF48019 241 423 1.64E-73 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 Gene3D G3DSA:3.40.50.300 4 144 4.7E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 Gene3D G3DSA:1.10.8.60 145 229 4.7E-8 T 23-04-2016 CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 Pfam PF16193 AAA C-terminal domain 179 256 7.7E-21 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain CYCME_RS07195 42eb1f684d63741f7a58ddabfd7e9e00 432 SUPERFAMILY SSF52540 4 225 3.8E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12305 3b0909dfed3cc3dad71ba2531f598b22 159 PANTHER PTHR33445 1 151 4.7E-42 T 23-04-2016 CYCME_RS12305 3b0909dfed3cc3dad71ba2531f598b22 159 SUPERFAMILY SSF81573 62 121 2.48E-11 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CYCME_RS12305 3b0909dfed3cc3dad71ba2531f598b22 159 Gene3D G3DSA:1.20.5.620 63 122 4.3E-14 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CYCME_RS12305 3b0909dfed3cc3dad71ba2531f598b22 159 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 9.2E-47 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 CYCME_RS12305 3b0909dfed3cc3dad71ba2531f598b22 159 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.9E-33 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CYCME_RS12305 3b0909dfed3cc3dad71ba2531f598b22 159 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.481 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 Gene3D G3DSA:1.10.10.10 160 234 1.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 Pfam PF00027 Cyclic nucleotide-binding domain 41 122 7.6E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 Pfam PF13545 Crp-like helix-turn-helix domain 159 232 1.1E-17 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 PANTHER PTHR24567 1 238 4.4E-37 T 23-04-2016 CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 199 214 1.4E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 183 199 1.4E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 SUPERFAMILY SSF46785 155 234 3.04E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 SMART SM00100 20 141 1.6E-7 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 SUPERFAMILY SSF51206 13 147 4.58E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 SMART SM00419 177 225 2.1E-14 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 PANTHER PTHR24567:SF28 1 238 4.4E-37 T 23-04-2016 CYCME_RS12425 acdf385152c2aadc3921bc2a63c5f1b1 238 Gene3D G3DSA:2.60.120.10 9 159 8.3E-15 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 262 4.1E-80 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 Pfam PF00290 Tryptophan synthase alpha chain 10 264 2.8E-88 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 PANTHER PTHR10314 11 51 2.1E-21 T 23-04-2016 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 PANTHER PTHR10314 74 143 2.1E-21 T 23-04-2016 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 34.097 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 SUPERFAMILY SSF51366 1 261 7.16E-89 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 Gene3D G3DSA:3.20.20.70 1 266 1.6E-97 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 PANTHER PTHR10314:SF4 11 51 2.1E-21 T 23-04-2016 CYCME_RS07345 5bed9e5d8caecccb0e0d3fb2e5b0f4bc 270 PANTHER PTHR10314:SF4 74 143 2.1E-21 T 23-04-2016 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 SUPERFAMILY SSF51905 18 265 1.68E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 PANTHER PTHR23023 16 491 1.4E-155 T 23-04-2016 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 Gene3D G3DSA:3.50.50.60 189 227 4.3E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 Gene3D G3DSA:3.50.50.60 310 371 4.3E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 Gene3D G3DSA:3.50.50.60 16 188 2.0E-70 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 Gene3D G3DSA:3.50.50.60 388 492 2.0E-70 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 SUPERFAMILY SSF51905 288 463 2.02E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 PANTHER PTHR23023:SF1 16 491 1.4E-155 T 23-04-2016 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 140 148 1.0E-7 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 19 41 1.0E-7 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 179 203 1.0E-7 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CYCME_RS07765 13e3d7395be9ba4ea73ba25fe27e5b6f 496 Pfam PF00743 Flavin-binding monooxygenase-like 19 227 8.0E-18 T 23-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 SMART SM00962 125 326 1.9E-118 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 299 312 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 SMART SM00963 29 110 1.2E-28 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 PANTHER PTHR11564:SF16 19 330 1.4E-143 T 23-04-2016 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 53 326 62.547 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 Pfam PF00448 SRP54-type protein, GTPase domain 125 325 1.1E-76 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 SUPERFAMILY SSF52540 122 325 8.15E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 Gene3D G3DSA:1.20.120.140 14 106 8.0E-33 T 23-04-2016 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 54 325 1.4E-113 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 PANTHER PTHR11564 19 330 1.4E-143 T 23-04-2016 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 Pfam PF02881 SRP54-type protein, helical bundle domain 40 106 1.6E-14 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 Gene3D G3DSA:3.40.50.300 120 326 1.3E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 SUPERFAMILY SSF47364 24 104 5.63E-22 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CYCME_RS03160 1054b4311855daa017c317789ef8d98a 332 SMART SM00382 124 316 6.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 PANTHER PTHR10192 3 408 1.2E-164 T 23-04-2016 CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 SUPERFAMILY SSF53218 180 324 6.81E-45 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 Gene3D G3DSA:2.170.190.11 54 133 3.6E-30 T 23-04-2016 CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 Gene3D G3DSA:3.40.980.10 166 333 1.6E-65 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 Pfam PF00994 Probable molybdopterin binding domain 186 320 5.6E-30 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 2.3E-35 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 SUPERFAMILY SSF63867 332 407 7.46E-22 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 SUPERFAMILY SSF63882 8 178 1.7E-52 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 SMART SM00852 183 320 1.8E-45 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 170 4.9E-36 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 Pfam PF03454 MoeA C-terminal region (domain IV) 333 404 1.2E-21 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 Gene3D G3DSA:2.40.340.10 334 402 9.0E-29 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 CYCME_RS04725 80f53a2ea9a61dea8371dd22ae38318f 408 Gene3D G3DSA:3.90.105.10 134 165 6.6E-20 T 23-04-2016 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 Pfam PF02629 CoA binding domain 6 99 8.0E-30 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 Gene3D G3DSA:3.40.50.720 2 120 6.1E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 Pfam PF00549 CoA-ligase 152 271 7.1E-20 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 Gene3D G3DSA:3.40.50.261 121 288 2.3E-75 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 SMART SM00881 4 100 3.3E-35 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 PANTHER PTHR11117 1 289 2.1E-189 T 23-04-2016 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 SUPERFAMILY SSF51735 1 123 2.27E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 6.0E-38 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 6.0E-38 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 6.0E-38 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 6.0E-38 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 SUPERFAMILY SSF52210 124 286 7.59E-55 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 289 8.3E-142 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CYCME_RS11535 af77a0685d071b195cd089b264d24e05 290 PIRSF PIRSF001553 1 290 7.6E-130 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PANTHER PTHR11405 1 1056 0.0 T 23-04-2016 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.5E-37 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Gene3D G3DSA:3.30.470.20 745 934 4.9E-81 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Gene3D G3DSA:3.30.470.20 201 399 3.4E-76 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 SUPERFAMILY SSF56059 128 401 1.75E-108 T 23-04-2016 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 SMART SM01096 424 547 4.6E-66 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Gene3D G3DSA:3.30.1490.20 142 200 2.2E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Gene3D G3DSA:3.40.50.20 3 108 3.4E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 SUPERFAMILY SSF52440 1 127 1.32E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.4E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.4E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.4E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.4E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.4E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.4E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.4E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Gene3D G3DSA:1.10.1030.10 400 538 1.2E-47 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 8.7E-38 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 9.0E-73 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Gene3D G3DSA:3.40.50.20 539 662 9.1E-59 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 SUPERFAMILY SSF52440 557 675 3.45E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 SMART SM00851 955 1041 9.6E-30 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.101 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 PANTHER PTHR11405:SF5 1 1056 0.0 T 23-04-2016 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1064 13.392 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 SUPERFAMILY SSF56059 673 933 4.07E-105 T 23-04-2016 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Pfam PF02142 MGS-like domain 956 1041 2.5E-17 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Gene3D G3DSA:3.30.1490.20 688 744 5.0E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 SUPERFAMILY SSF48108 396 554 2.75E-49 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 Gene3D G3DSA:3.40.50.1380 938 1066 1.6E-38 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CYCME_RS04955 4cea8f45460b065c145105eebd921fa4 1071 SUPERFAMILY SSF52335 935 1063 2.62E-36 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CYCME_RS11640 bae757cffcac1485b233a69234f89a30 166 SUPERFAMILY SSF55811 6 155 8.67E-29 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS11640 bae757cffcac1485b233a69234f89a30 166 Pfam PF00293 NUDIX domain 7 142 4.0E-23 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CYCME_RS11640 bae757cffcac1485b233a69234f89a30 166 PANTHER PTHR23114 1 145 8.2E-36 T 23-04-2016 CYCME_RS11640 bae757cffcac1485b233a69234f89a30 166 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 35.829 T 23-04-2016 IPR022927 RNA pyrophosphohydrolase RppH CYCME_RS11640 bae757cffcac1485b233a69234f89a30 166 Gene3D G3DSA:3.90.79.10 3 153 4.4E-30 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS11640 bae757cffcac1485b233a69234f89a30 166 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.8E-7 T 23-04-2016 IPR020476 NUDIX hydrolase CYCME_RS11640 bae757cffcac1485b233a69234f89a30 166 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.8E-7 T 23-04-2016 IPR020476 NUDIX hydrolase CYCME_RS11640 bae757cffcac1485b233a69234f89a30 166 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CYCME_RS01820 ab938152058c50a35d78e7eb8ad9c0ce 143 Pfam PF07366 SnoaL-like polyketide cyclase 9 131 2.0E-20 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain CYCME_RS01820 ab938152058c50a35d78e7eb8ad9c0ce 143 SUPERFAMILY SSF54427 5 135 2.03E-30 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS01820 ab938152058c50a35d78e7eb8ad9c0ce 143 PANTHER PTHR38436 3 142 2.4E-15 T 23-04-2016 CYCME_RS01820 ab938152058c50a35d78e7eb8ad9c0ce 143 Gene3D G3DSA:3.10.450.50 4 138 6.2E-31 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS10425 4a99f765d7a2f59ea0764cbec30aeb63 122 Gene3D G3DSA:3.40.50.2300 1 120 1.3E-39 T 23-04-2016 CYCME_RS10425 4a99f765d7a2f59ea0764cbec30aeb63 122 SMART SM00448 2 115 6.2E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS10425 4a99f765d7a2f59ea0764cbec30aeb63 122 PANTHER PTHR24423 2 121 2.9E-41 T 23-04-2016 CYCME_RS10425 4a99f765d7a2f59ea0764cbec30aeb63 122 SUPERFAMILY SSF52172 1 120 5.12E-40 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS10425 4a99f765d7a2f59ea0764cbec30aeb63 122 Pfam PF00072 Response regulator receiver domain 4 115 1.0E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 69 2.7E-16 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 350 1.0E-37 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 586 705 8.8E-34 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 SUPERFAMILY SSF56784 326 346 1.27E-55 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 SUPERFAMILY SSF56784 470 716 1.27E-55 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Gene3D G3DSA:1.20.1110.10 56 115 1.7E-93 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Gene3D G3DSA:1.20.1110.10 581 884 1.7E-93 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 631 3.1E-38 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 648 3.1E-38 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 168 182 3.1E-38 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 520 3.1E-38 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 328 342 3.1E-38 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 541 3.1E-38 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 SMART SM00831 3 76 7.0E-16 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 SUPERFAMILY SSF81653 120 227 1.07E-24 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Gene3D G3DSA:3.40.1110.10 319 516 4.7E-49 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 SUPERFAMILY SSF81660 334 521 1.98E-41 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Pfam PF00702 haloacid dehalogenase-like hydrolase 325 626 1.3E-21 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 584 600 2.4E-16 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 612 628 2.4E-16 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 473 491 2.4E-16 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 644 669 2.4E-16 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Gene3D G3DSA:2.70.150.10 19 55 1.2E-40 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Gene3D G3DSA:2.70.150.10 116 227 1.2E-40 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Pfam PF00122 E1-E2 ATPase 90 319 2.8E-58 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 SUPERFAMILY SSF81665 662 884 5.62E-117 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 SUPERFAMILY SSF81665 229 322 5.62E-117 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 SUPERFAMILY SSF81665 2 121 5.62E-117 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PANTHER PTHR24093 1 892 0.0 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 PANTHER PTHR24093:SF268 1 892 0.0 T 23-04-2016 CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 Pfam PF00689 Cation transporting ATPase, C-terminus 696 881 2.6E-49 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal CYCME_RS04135 56c45e314a4bae7b34ffcda040a27cae 895 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 330 336 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CYCME_RS04610 fa80e612ab1b8f2a5118d1ab0da9dbc5 396 Gene3D G3DSA:1.20.1250.20 8 187 4.3E-12 T 23-04-2016 CYCME_RS04610 fa80e612ab1b8f2a5118d1ab0da9dbc5 396 Gene3D G3DSA:1.20.1250.20 195 386 2.9E-27 T 23-04-2016 CYCME_RS04610 fa80e612ab1b8f2a5118d1ab0da9dbc5 396 SUPERFAMILY SSF103473 5 381 4.1E-37 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS04610 fa80e612ab1b8f2a5118d1ab0da9dbc5 396 Pfam PF12832 MFS_1 like family 8 361 2.3E-76 T 23-04-2016 IPR024989 Major facilitator superfamily associated domain CYCME_RS04610 fa80e612ab1b8f2a5118d1ab0da9dbc5 396 PANTHER PTHR23522 1 396 1.2E-86 T 23-04-2016 CYCME_RS04610 fa80e612ab1b8f2a5118d1ab0da9dbc5 396 PIRSF PIRSF004925 2 389 5.2E-97 T 23-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter CYCME_RS04610 fa80e612ab1b8f2a5118d1ab0da9dbc5 396 PANTHER PTHR23522:SF3 1 396 1.2E-86 T 23-04-2016 CYCME_RS00655 0a9f10d195a3c3505100ac4e3c28729f 278 PANTHER PTHR32552 5 276 2.9E-66 T 23-04-2016 CYCME_RS00655 0a9f10d195a3c3505100ac4e3c28729f 278 SUPERFAMILY SSF53098 107 272 5.18E-41 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS00655 0a9f10d195a3c3505100ac4e3c28729f 278 Pfam PF00665 Integrase core domain 115 228 4.4E-28 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS00655 0a9f10d195a3c3505100ac4e3c28729f 278 Pfam PF13276 HTH-like domain 37 89 5.8E-11 T 23-04-2016 IPR025948 HTH-like domain CYCME_RS00655 0a9f10d195a3c3505100ac4e3c28729f 278 Gene3D G3DSA:3.30.420.10 108 267 8.9E-36 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 Gene3D G3DSA:3.40.50.740 81 154 2.1E-81 T 23-04-2016 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 Gene3D G3DSA:3.40.50.740 338 587 2.1E-81 T 23-04-2016 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 SUPERFAMILY SSF53706 20 609 3.4E-175 T 23-04-2016 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 Pfam PF00384 Molybdopterin oxidoreductase 80 505 4.0E-83 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 PANTHER PTHR11615 19 732 1.2E-182 T 23-04-2016 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 SUPERFAMILY SSF50692 580 716 6.56E-41 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 SMART SM00926 19 74 6.7E-15 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 24 42 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 PANTHER PTHR11615:SF119 19 732 1.2E-182 T 23-04-2016 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 19 70 4.4E-11 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 Pfam PF01568 Molydopterin dinucleotide binding domain 607 712 8.7E-27 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 Gene3D G3DSA:3.40.228.10 155 337 1.6E-66 T 23-04-2016 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 Gene3D G3DSA:2.20.25.90 20 73 6.3E-15 T 23-04-2016 CYCME_RS08580 92f7e104ec30864a6d2b37df864eb4f1 733 Gene3D G3DSA:2.40.40.20 599 717 1.3E-41 T 23-04-2016 CYCME_RS05540 75092bf65f8171bfc200395162d0a836 127 Pfam PF01638 HxlR-like helix-turn-helix 25 112 2.9E-29 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type CYCME_RS05540 75092bf65f8171bfc200395162d0a836 127 SUPERFAMILY SSF46785 12 122 1.17E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS05540 75092bf65f8171bfc200395162d0a836 127 PANTHER PTHR33204:SF15 4 123 9.7E-38 T 23-04-2016 CYCME_RS05540 75092bf65f8171bfc200395162d0a836 127 Gene3D G3DSA:1.10.10.10 8 124 3.3E-41 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS05540 75092bf65f8171bfc200395162d0a836 127 PANTHER PTHR33204 4 123 9.7E-38 T 23-04-2016 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 Pfam PF00691 OmpA family 147 243 7.4E-21 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 SUPERFAMILY SSF103088 140 247 4.84E-32 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 PANTHER PTHR30128:SF10 80 248 5.4E-47 T 23-04-2016 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 Gene3D G3DSA:4.10.1080.10 73 140 5.3E-10 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 Gene3D G3DSA:3.30.1330.60 143 247 8.1E-34 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 SUPERFAMILY SSF103647 67 137 2.09E-14 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 232 251 1.7E-8 T 23-04-2016 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 212 231 1.7E-8 T 23-04-2016 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 194 211 1.7E-8 T 23-04-2016 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 PANTHER PTHR30128 80 248 5.4E-47 T 23-04-2016 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 PRINTS PR01021 OMPA domain signature 179 194 6.0E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 PRINTS PR01021 OMPA domain signature 194 210 6.0E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS11670 a0482d5bb5615a2af4cddaca9774279a 251 Pfam PF02412 Thrombospondin type 3 repeat 107 127 7.1E-5 T 23-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 PANTHER PTHR30303:SF0 18 351 1.8E-146 T 23-04-2016 CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 SUPERFAMILY SSF56042 172 346 3.89E-39 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 Gene3D G3DSA:3.90.650.10 176 327 7.5E-21 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 324 4.2E-22 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 PIRSF PIRSF005644 17 351 7.9E-121 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 PANTHER PTHR30303 18 351 1.8E-146 T 23-04-2016 CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 20 351 1.0E-135 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 Gene3D G3DSA:3.30.1330.10 35 166 2.7E-23 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 SUPERFAMILY SSF55326 19 167 1.67E-31 T 23-04-2016 CYCME_RS08740 4326931e3c5548adfc39183c8c6030fd 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 65 164 1.4E-16 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CYCME_RS11460 552c89d7cc53408e44c5519ccea21196 432 SUPERFAMILY SSF56935 73 325 1.16E-20 T 23-04-2016 CYCME_RS11460 552c89d7cc53408e44c5519ccea21196 432 SUPERFAMILY SSF56935 353 432 1.16E-20 T 23-04-2016 CYCME_RS11460 552c89d7cc53408e44c5519ccea21196 432 Pfam PF07396 Phosphate-selective porin O and P 76 432 3.8E-71 T 23-04-2016 IPR010870 Phosphate-selective porin O/P CYCME_RS11460 552c89d7cc53408e44c5519ccea21196 432 Gene3D G3DSA:2.40.160.10 53 432 3.8E-115 T 23-04-2016 IPR023614 Porin domain CYCME_RS03140 7276d5cebd7d47edb69f14978ca6a429 174 SUPERFAMILY SSF50630 57 161 1.61E-19 T 23-04-2016 IPR021109 Aspartic peptidase domain CYCME_RS03140 7276d5cebd7d47edb69f14978ca6a429 174 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 55 165 8.2E-29 T 23-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal CYCME_RS03140 7276d5cebd7d47edb69f14978ca6a429 174 Pfam PF13975 gag-polyprotein putative aspartyl protease 69 157 2.5E-23 T 23-04-2016 CYCME_RS03140 7276d5cebd7d47edb69f14978ca6a429 174 PANTHER PTHR41535 6 170 4.0E-25 T 23-04-2016 CYCME_RS03140 7276d5cebd7d47edb69f14978ca6a429 174 PANTHER PTHR41535:SF1 6 170 4.0E-25 T 23-04-2016 CYCME_RS03140 7276d5cebd7d47edb69f14978ca6a429 174 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 79 90 - T 23-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 SUPERFAMILY SSF52540 282 505 1.25E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 Gene3D G3DSA:3.40.50.300 280 508 1.1E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 Gene3D G3DSA:3.40.50.300 21 247 2.9E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 SMART SM00382 44 240 8.9E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 SMART SM00382 308 499 8.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 Pfam PF00005 ABC transporter 35 182 2.9E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 Pfam PF00005 ABC transporter 300 443 2.7E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 Pfam PF12698 ABC-2 family transporter protein 582 921 4.6E-36 T 23-04-2016 CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 PANTHER PTHR24220:SF388 21 403 1.2E-223 T 23-04-2016 CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 SUPERFAMILY SSF52540 22 246 7.8E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09645 b62ad4022d77382e8e5a3070fae3a32e 929 PANTHER PTHR24220 21 403 1.2E-223 T 23-04-2016 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 PANTHER PTHR33569:SF1 2 100 1.1E-44 T 23-04-2016 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.631 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 PANTHER PTHR33569 2 100 1.1E-44 T 23-04-2016 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 PIRSF PIRSF001223 1 100 2.6E-50 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-39 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 Gene3D G3DSA:3.30.280.10 1 99 3.4E-50 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 9.0E-53 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 Pfam PF00547 Urease, gamma subunit 1 99 9.4E-48 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS00060 ec5d206dea2c8d17bc69459924adb564 100 SUPERFAMILY SSF54111 1 99 2.35E-46 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS05390 7242b98370aeb6e04c175d075b5dc328 78 Gene3D G3DSA:1.10.1200.10 3 76 6.3E-36 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CYCME_RS05390 7242b98370aeb6e04c175d075b5dc328 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.8E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CYCME_RS05390 7242b98370aeb6e04c175d075b5dc328 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 4.5E-37 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CYCME_RS05390 7242b98370aeb6e04c175d075b5dc328 78 SUPERFAMILY SSF47336 2 76 2.09E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CYCME_RS05390 7242b98370aeb6e04c175d075b5dc328 78 PANTHER PTHR20863 4 78 1.9E-31 T 23-04-2016 CYCME_RS05390 7242b98370aeb6e04c175d075b5dc328 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 8.0E-12 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CYCME_RS05390 7242b98370aeb6e04c175d075b5dc328 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site CYCME_RS05390 7242b98370aeb6e04c175d075b5dc328 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.967 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CYCME_RS03880 5248d67d5248f04aab36cfffffce5770 152 Pfam PF02130 Uncharacterized protein family UPF0054 22 143 3.2E-34 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CYCME_RS03880 5248d67d5248f04aab36cfffffce5770 152 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 148 22.602 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CYCME_RS03880 5248d67d5248f04aab36cfffffce5770 152 SUPERFAMILY SSF55486 19 150 9.28E-42 T 23-04-2016 CYCME_RS03880 5248d67d5248f04aab36cfffffce5770 152 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 35 144 1.5E-34 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CYCME_RS03880 5248d67d5248f04aab36cfffffce5770 152 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site CYCME_RS03880 5248d67d5248f04aab36cfffffce5770 152 PANTHER PTHR22881 2 151 1.2E-46 T 23-04-2016 CYCME_RS03880 5248d67d5248f04aab36cfffffce5770 152 Gene3D G3DSA:3.40.390.30 15 150 1.6E-43 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CYCME_RS05890 92354262f940783ab6c59b9717b96b8a 443 PANTHER PTHR21432 8 438 9.9E-128 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CYCME_RS05890 92354262f940783ab6c59b9717b96b8a 443 SUPERFAMILY SSF100950 188 439 7.33E-60 T 23-04-2016 CYCME_RS05890 92354262f940783ab6c59b9717b96b8a 443 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 276 432 4.4E-58 T 23-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CYCME_RS05890 92354262f940783ab6c59b9717b96b8a 443 PANTHER PTHR21432:SF18 8 438 9.9E-128 T 23-04-2016 CYCME_RS05890 92354262f940783ab6c59b9717b96b8a 443 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 7 179 4.0E-19 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CYCME_RS05890 92354262f940783ab6c59b9717b96b8a 443 Gene3D G3DSA:3.40.810.20 192 434 9.1E-44 T 23-04-2016 CYCME_RS05890 92354262f940783ab6c59b9717b96b8a 443 Gene3D G3DSA:3.40.1080.10 7 183 3.7E-44 T 23-04-2016 CYCME_RS05890 92354262f940783ab6c59b9717b96b8a 443 SUPERFAMILY SSF100950 5 225 6.28E-30 T 23-04-2016 CYCME_RS09515 5eca2dd8d575c299f22a7dcadfc0abaf 281 SUPERFAMILY SSF50182 99 162 6.87E-16 T 23-04-2016 IPR010920 LSM domain CYCME_RS09515 5eca2dd8d575c299f22a7dcadfc0abaf 281 PANTHER PTHR30221 14 280 3.4E-61 T 23-04-2016 CYCME_RS09515 5eca2dd8d575c299f22a7dcadfc0abaf 281 Gene3D G3DSA:3.30.70.100 166 250 4.9E-27 T 23-04-2016 CYCME_RS09515 5eca2dd8d575c299f22a7dcadfc0abaf 281 Gene3D G3DSA:2.30.30.60 113 160 6.3E-14 T 23-04-2016 CYCME_RS09515 5eca2dd8d575c299f22a7dcadfc0abaf 281 SUPERFAMILY SSF82689 164 261 5.23E-29 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CYCME_RS09515 5eca2dd8d575c299f22a7dcadfc0abaf 281 Pfam PF00924 Mechanosensitive ion channel 56 252 1.7E-49 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CYCME_RS09515 5eca2dd8d575c299f22a7dcadfc0abaf 281 SUPERFAMILY SSF82861 15 96 2.09E-10 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 222 2.4E-19 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 119 1.7E-22 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 PANTHER PTHR10909:SF285 4 390 1.1E-239 T 23-04-2016 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 PANTHER PTHR10909 4 390 1.1E-239 T 23-04-2016 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 Gene3D G3DSA:2.40.110.10 124 224 1.7E-30 T 23-04-2016 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 Gene3D G3DSA:1.20.140.10 225 389 7.4E-56 T 23-04-2016 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 SUPERFAMILY SSF47203 233 388 5.64E-46 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 378 1.1E-36 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 SUPERFAMILY SSF56645 7 247 5.63E-62 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS05785 b8119aaefcfc57d0af92ebb98ec91740 390 Gene3D G3DSA:1.10.540.10 8 120 4.8E-29 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS00610 f0bb6f3146bc216eb1295f4fb7ee5c6d 204 PANTHER PTHR33508 1 194 6.6E-41 T 23-04-2016 CYCME_RS00610 f0bb6f3146bc216eb1295f4fb7ee5c6d 204 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 193 2.2E-35 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CYCME_RS00610 f0bb6f3146bc216eb1295f4fb7ee5c6d 204 PANTHER PTHR33508:SF1 1 194 6.6E-41 T 23-04-2016 CYCME_RS00610 f0bb6f3146bc216eb1295f4fb7ee5c6d 204 Pfam PF01914 MarC family integral membrane protein 5 194 1.1E-41 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CYCME_RS08640 87df08ced6915c4dfd81707af7772420 491 Pfam PF00361 Proton-conducting membrane transporter 133 425 1.4E-52 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CYCME_RS08640 87df08ced6915c4dfd81707af7772420 491 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 119 5.3E-8 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CYCME_RS08640 87df08ced6915c4dfd81707af7772420 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 2.8E-17 T 23-04-2016 CYCME_RS08640 87df08ced6915c4dfd81707af7772420 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 2.8E-17 T 23-04-2016 CYCME_RS08640 87df08ced6915c4dfd81707af7772420 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 2.8E-17 T 23-04-2016 CYCME_RS08640 87df08ced6915c4dfd81707af7772420 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 80 105 2.8E-17 T 23-04-2016 CYCME_RS08640 87df08ced6915c4dfd81707af7772420 491 PANTHER PTHR22773 1 490 8.6E-147 T 23-04-2016 CYCME_RS08640 87df08ced6915c4dfd81707af7772420 491 PANTHER PTHR22773:SF46 1 490 8.6E-147 T 23-04-2016 CYCME_RS08310 af4b70298b4740aaeae72ff3e543ba63 294 Gene3D G3DSA:1.25.40.10 169 259 2.1E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS08310 af4b70298b4740aaeae72ff3e543ba63 294 Pfam PF14559 Tetratricopeptide repeat 208 258 4.7E-6 T 23-04-2016 CYCME_RS08310 af4b70298b4740aaeae72ff3e543ba63 294 SMART SM00028 230 263 0.0046 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS08310 af4b70298b4740aaeae72ff3e543ba63 294 SMART SM00028 196 229 0.28 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS08310 af4b70298b4740aaeae72ff3e543ba63 294 SUPERFAMILY SSF48452 182 265 3.8E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS11230 9770d4d79dd694bd56f47f7c34cfcdcb 210 Pfam PF06961 Protein of unknown function (DUF1294) 119 173 1.6E-23 T 23-04-2016 IPR010718 Protein of unknown function DUF1294 CYCME_RS11230 9770d4d79dd694bd56f47f7c34cfcdcb 210 Gene3D G3DSA:2.40.50.140 4 69 1.2E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS11230 9770d4d79dd694bd56f47f7c34cfcdcb 210 SUPERFAMILY SSF50249 2 67 2.03E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS11230 9770d4d79dd694bd56f47f7c34cfcdcb 210 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 1.8E-10 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS11230 9770d4d79dd694bd56f47f7c34cfcdcb 210 PANTHER PTHR12962 107 209 8.9E-30 T 23-04-2016 CYCME_RS11230 9770d4d79dd694bd56f47f7c34cfcdcb 210 SMART SM00357 4 68 1.8E-9 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CYCME_RS11230 9770d4d79dd694bd56f47f7c34cfcdcb 210 PANTHER PTHR12962:SF1 107 209 8.9E-30 T 23-04-2016 CYCME_RS08470 530889af50f0d5eea58928cd360008a9 250 Pfam PF01048 Phosphorylase superfamily 3 239 2.3E-40 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CYCME_RS08470 530889af50f0d5eea58928cd360008a9 250 Gene3D G3DSA:3.40.50.1580 3 247 6.5E-79 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CYCME_RS08470 530889af50f0d5eea58928cd360008a9 250 SUPERFAMILY SSF53167 2 245 2.78E-77 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CYCME_RS08470 530889af50f0d5eea58928cd360008a9 250 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 242 5.6E-85 T 23-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 CYCME_RS08470 530889af50f0d5eea58928cd360008a9 250 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 250 33.516 T 23-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 CYCME_RS08470 530889af50f0d5eea58928cd360008a9 250 PANTHER PTHR11904:SF1 1 246 3.1E-83 T 23-04-2016 CYCME_RS08470 530889af50f0d5eea58928cd360008a9 250 PANTHER PTHR11904 1 246 3.1E-83 T 23-04-2016 IPR001369 PNP/MTAP phosphorylase CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 PANTHER PTHR32552:SF8 81 784 4.0E-120 T 23-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 PANTHER PTHR32552:SF8 27 58 4.0E-120 T 23-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 Gene3D G3DSA:2.40.170.20 203 784 6.5E-104 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 Pfam PF00593 TonB dependent receptor 528 782 1.4E-20 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 SUPERFAMILY SSF56935 45 784 4.68E-106 T 23-04-2016 CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 PANTHER PTHR32552 81 784 4.0E-120 T 23-04-2016 CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 PANTHER PTHR32552 27 58 4.0E-120 T 23-04-2016 CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 Gene3D G3DSA:2.170.130.10 75 195 3.2E-27 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS11210 6c97e1d64adfd37011f27ca56b7e136f 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 89 188 4.3E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS03720 a6701b7589c2c73b77ebb1957e0be81b 101 PANTHER PTHR19836 1 101 5.3E-54 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03720 a6701b7589c2c73b77ebb1957e0be81b 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.778 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid CYCME_RS03720 a6701b7589c2c73b77ebb1957e0be81b 101 Gene3D G3DSA:4.10.830.10 43 101 1.4E-27 T 23-04-2016 CYCME_RS03720 a6701b7589c2c73b77ebb1957e0be81b 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.9E-23 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03720 a6701b7589c2c73b77ebb1957e0be81b 101 SUPERFAMILY SSF57716 2 101 7.84E-36 T 23-04-2016 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 SUPERFAMILY SSF46911 5 76 1.03E-26 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 TIGRFAM TIGR00165 S18: ribosomal protein bS18 7 74 3.3E-33 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 23 74 3.0E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 Pfam PF01084 Ribosomal protein S18 20 70 7.9E-24 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 PRINTS PR00974 Ribosomal protein S18 family signature 62 72 2.2E-17 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 PRINTS PR00974 Ribosomal protein S18 family signature 30 40 2.2E-17 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 PRINTS PR00974 Ribosomal protein S18 family signature 48 62 2.2E-17 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 PRINTS PR00974 Ribosomal protein S18 family signature 40 47 2.2E-17 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 PANTHER PTHR13479 7 72 2.0E-27 T 23-04-2016 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 Gene3D G3DSA:4.10.640.10 11 76 3.1E-30 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 ProSitePatterns PS00057 Ribosomal protein S18 signature. 23 46 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09165 e13b861b3625bd5361f731194cd0677d 78 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 75 20.152 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 Pfam PF13181 Tetratricopeptide repeat 147 175 0.0067 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 244 1.6E-66 T 23-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 Gene3D G3DSA:1.25.40.10 41 247 1.8E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 SMART SM00028 145 178 0.0052 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 SMART SM00028 41 74 0.091 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 SMART SM00028 75 108 0.062 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 PANTHER PTHR23083 41 248 4.7E-26 T 23-04-2016 CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 SUPERFAMILY SSF81901 42 221 1.99E-21 T 23-04-2016 CYCME_RS09700 e960980c78f92476a6ecf8efe98f0fb6 259 Pfam PF13432 Tetratricopeptide repeat 47 108 3.2E-4 T 23-04-2016 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 PANTHER PTHR32552 468 512 2.5E-33 T 23-04-2016 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 PANTHER PTHR32552 528 576 2.5E-33 T 23-04-2016 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 PANTHER PTHR32552 7 449 2.5E-33 T 23-04-2016 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 PANTHER PTHR32552:SF31 468 512 2.5E-33 T 23-04-2016 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 PANTHER PTHR32552:SF31 528 576 2.5E-33 T 23-04-2016 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 PANTHER PTHR32552:SF31 7 449 2.5E-33 T 23-04-2016 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 Pfam PF00593 TonB dependent receptor 415 665 4.3E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 SUPERFAMILY SSF56935 44 659 3.55E-83 T 23-04-2016 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 164 1.7E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 Gene3D G3DSA:2.170.130.10 43 166 2.7E-27 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS08505 c0a0435ab88b7e8a24901d460fffaeba 687 Gene3D G3DSA:2.40.170.20 167 658 4.5E-48 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 137 163 1.4E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 1.4E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 178 200 1.4E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 52 67 1.4E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 22 47 1.4E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 73 93 1.4E-52 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 157 422 4.7E-34 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 PANTHER PTHR21266 18 234 6.1E-62 T 23-04-2016 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 PANTHER PTHR21266:SF30 18 234 6.1E-62 T 23-04-2016 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 SUPERFAMILY SSF55961 154 436 1.1E-68 T 23-04-2016 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 Pfam PF00355 Rieske [2Fe-2S] domain 38 120 9.5E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 Gene3D G3DSA:2.102.10.10 37 143 1.4E-21 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 SUPERFAMILY SSF50022 6 152 8.25E-45 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 Gene3D G3DSA:3.90.380.10 144 439 1.3E-99 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS12395 102e5146998fd02b2f03ca6c925b493f 460 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 80 103 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 Gene3D G3DSA:2.60.40.420 478 608 1.3E-39 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 12 614 1.5E-252 T 23-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 SUPERFAMILY SSF49503 55 197 9.69E-36 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 SUPERFAMILY SSF49503 177 386 1.25E-52 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 Gene3D G3DSA:2.60.40.420 55 187 6.1E-29 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 SUPERFAMILY SSF49503 455 609 4.23E-33 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 PANTHER PTHR11709 466 605 3.0E-94 T 23-04-2016 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 PANTHER PTHR11709 258 370 3.0E-94 T 23-04-2016 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 PANTHER PTHR11709 54 217 3.0E-94 T 23-04-2016 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 Pfam PF07732 Multicopper oxidase 64 172 2.2E-35 T 23-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 Pfam PF07731 Multicopper oxidase 503 608 1.3E-19 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 Pfam PF00394 Multicopper oxidase 183 353 3.5E-30 T 23-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 Gene3D G3DSA:2.60.40.420 188 386 1.0E-50 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 PANTHER PTHR11709:SF33 466 605 3.0E-94 T 23-04-2016 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 PANTHER PTHR11709:SF33 258 370 3.0E-94 T 23-04-2016 CYCME_RS06640 8a257ef6f99acd2e09567ff89792c1c2 615 PANTHER PTHR11709:SF33 54 217 3.0E-94 T 23-04-2016 CYCME_RS11890 935b5a4d9e896b28d4ccd6e2ab8539f0 154 Pfam PF00436 Single-strand binding protein family 6 110 1.1E-44 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 CYCME_RS11890 935b5a4d9e896b28d4ccd6e2ab8539f0 154 SUPERFAMILY SSF50249 4 154 1.1E-61 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS11890 935b5a4d9e896b28d4ccd6e2ab8539f0 154 PANTHER PTHR10302 4 154 5.5E-53 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CYCME_RS11890 935b5a4d9e896b28d4ccd6e2ab8539f0 154 PIRSF PIRSF002070 2 153 2.3E-40 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CYCME_RS11890 935b5a4d9e896b28d4ccd6e2ab8539f0 154 Hamap MF_00984 Single-stranded DNA-binding protein. 6 114 39.813 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CYCME_RS11890 935b5a4d9e896b28d4ccd6e2ab8539f0 154 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 154 2.6E-59 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CYCME_RS11890 935b5a4d9e896b28d4ccd6e2ab8539f0 154 Gene3D G3DSA:2.40.50.140 4 154 6.4E-62 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03830 6a4c706fc58608f34add67268893d4c0 273 Gene3D G3DSA:3.40.190.10 16 151 2.2E-39 T 23-04-2016 CYCME_RS03830 6a4c706fc58608f34add67268893d4c0 273 Gene3D G3DSA:3.40.190.10 185 267 9.5E-20 T 23-04-2016 CYCME_RS03830 6a4c706fc58608f34add67268893d4c0 273 PANTHER PTHR37945 7 270 3.7E-99 T 23-04-2016 CYCME_RS03830 6a4c706fc58608f34add67268893d4c0 273 Pfam PF12849 PBP superfamily domain 22 243 3.8E-27 T 23-04-2016 IPR024370 PBP domain CYCME_RS03830 6a4c706fc58608f34add67268893d4c0 273 SUPERFAMILY SSF53850 25 251 7.96E-26 T 23-04-2016 CYCME_RS12515 38dccde2cdaaa4c5287b9c9c0772f98c 415 SUPERFAMILY SSF56935 96 397 1.4E-40 T 23-04-2016 CYCME_RS12515 38dccde2cdaaa4c5287b9c9c0772f98c 415 SUPERFAMILY SSF56935 2 69 1.4E-40 T 23-04-2016 CYCME_RS12515 38dccde2cdaaa4c5287b9c9c0772f98c 415 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 7 382 3.6E-36 T 23-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CYCME_RS12515 38dccde2cdaaa4c5287b9c9c0772f98c 415 PANTHER PTHR35093 4 381 3.6E-23 T 23-04-2016 CYCME_RS12515 38dccde2cdaaa4c5287b9c9c0772f98c 415 Gene3D G3DSA:2.40.160.60 2 394 1.1E-62 T 23-04-2016 CYCME_RS12045 825f378988275fc9de8f008b7d81de2c 561 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 79 528 5.0E-55 T 23-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 CYCME_RS12045 825f378988275fc9de8f008b7d81de2c 561 SUPERFAMILY SSF52540 304 527 1.06E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12045 825f378988275fc9de8f008b7d81de2c 561 SUPERFAMILY SSF52540 100 277 1.06E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12045 825f378988275fc9de8f008b7d81de2c 561 PANTHER PTHR37937:SF1 80 552 1.5E-13 T 23-04-2016 CYCME_RS12045 825f378988275fc9de8f008b7d81de2c 561 Gene3D G3DSA:3.40.50.300 78 195 2.5E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12045 825f378988275fc9de8f008b7d81de2c 561 Gene3D G3DSA:3.40.50.300 340 527 2.5E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12045 825f378988275fc9de8f008b7d81de2c 561 PANTHER PTHR37937 80 552 1.5E-13 T 23-04-2016 CYCME_RS07510 b3faf739b938a154a4cccf8961593248 156 Pfam PF02082 Transcriptional regulator 3 83 3.8E-16 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CYCME_RS07510 b3faf739b938a154a4cccf8961593248 156 Gene3D G3DSA:1.10.10.10 3 137 1.0E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07510 b3faf739b938a154a4cccf8961593248 156 SUPERFAMILY SSF46785 3 134 1.06E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07510 b3faf739b938a154a4cccf8961593248 156 PANTHER PTHR33221:SF2 3 138 8.6E-38 T 23-04-2016 CYCME_RS07510 b3faf739b938a154a4cccf8961593248 156 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 3.0E-47 T 23-04-2016 IPR014290 SUF system FeS cluster assembly regulator CYCME_RS07510 b3faf739b938a154a4cccf8961593248 156 PANTHER PTHR33221 3 138 8.6E-38 T 23-04-2016 CYCME_RS07510 b3faf739b938a154a4cccf8961593248 156 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 2.4E-23 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CYCME_RS10465 c636d96aeaa79a9e75cd16c4dbe8ce13 100 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 87 7.1E-36 T 23-04-2016 IPR010152 CRISPR-associated protein Cas2 subtype CYCME_RS10465 c636d96aeaa79a9e75cd16c4dbe8ce13 100 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 87 2.4E-37 T 23-04-2016 IPR010152 CRISPR-associated protein Cas2 subtype CYCME_RS01110 06242fa5082b8000e57cf4ed2fcdef34 486 Pfam PF07044 Protein of unknown function (DUF1329) 90 481 1.3E-117 T 23-04-2016 IPR010752 Protein of unknown function DUF1329 CYCME_RS01110 06242fa5082b8000e57cf4ed2fcdef34 486 Gene3D G3DSA:2.50.20.10 249 329 7.5E-17 T 23-04-2016 CYCME_RS01110 06242fa5082b8000e57cf4ed2fcdef34 486 Gene3D G3DSA:2.50.20.10 362 481 7.5E-17 T 23-04-2016 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 240 8.1E-44 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 11 23 7.5E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 25 36 7.5E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 176 186 7.5E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 40 53 7.5E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 200 7.5E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 SUPERFAMILY SSF52374 8 290 2.94E-77 T 23-04-2016 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 8 276 1.2E-102 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 PANTHER PTHR11451 6 230 4.1E-85 T 23-04-2016 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 8 296 37.355 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 PANTHER PTHR11451:SF35 6 230 4.1E-85 T 23-04-2016 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 Gene3D G3DSA:3.90.800.10 73 176 5.4E-19 T 23-04-2016 CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 Gene3D G3DSA:3.40.50.620 8 72 2.7E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS04705 ac961867cd99b7c829eaf2e614754d14 300 Gene3D G3DSA:3.40.50.620 178 227 2.7E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS11025 249ee75aafa27b6d49b78966833b1295 257 PANTHER PTHR22916:SF4 2 245 3.9E-63 T 23-04-2016 CYCME_RS11025 249ee75aafa27b6d49b78966833b1295 257 PANTHER PTHR22916 2 245 3.9E-63 T 23-04-2016 CYCME_RS11025 249ee75aafa27b6d49b78966833b1295 257 SUPERFAMILY SSF53448 2 208 3.0E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS11025 249ee75aafa27b6d49b78966833b1295 257 Pfam PF00535 Glycosyl transferase family 2 5 132 1.1E-25 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS11025 249ee75aafa27b6d49b78966833b1295 257 Gene3D G3DSA:3.90.550.10 1 182 5.7E-46 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07530 6d102920798873e53ece0f9711228ca4 586 PANTHER PTHR30255 30 585 1.3E-197 T 23-04-2016 CYCME_RS07530 6d102920798873e53ece0f9711228ca4 586 Pfam PF02272 DHHA1 domain 389 457 7.5E-15 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CYCME_RS07530 6d102920798873e53ece0f9711228ca4 586 Pfam PF01368 DHH family 81 209 6.7E-11 T 23-04-2016 IPR001667 DDH domain CYCME_RS07530 6d102920798873e53ece0f9711228ca4 586 PANTHER PTHR30255:SF2 30 585 1.3E-197 T 23-04-2016 CYCME_RS07530 6d102920798873e53ece0f9711228ca4 586 SUPERFAMILY SSF64182 56 468 7.46E-114 T 23-04-2016 CYCME_RS07530 6d102920798873e53ece0f9711228ca4 586 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 31 578 3.4E-154 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CYCME_RS04270 1784264a72a6535499db08050770d4f4 165 PANTHER PTHR30455:SF2 2 156 7.7E-69 T 23-04-2016 CYCME_RS04270 1784264a72a6535499db08050770d4f4 165 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 84.437 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CYCME_RS04270 1784264a72a6535499db08050770d4f4 165 Pfam PF03477 ATP cone domain 50 136 4.8E-13 T 23-04-2016 IPR005144 ATP-cone domain CYCME_RS04270 1784264a72a6535499db08050770d4f4 165 PANTHER PTHR30455 2 156 7.7E-69 T 23-04-2016 CYCME_RS04270 1784264a72a6535499db08050770d4f4 165 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.6E-63 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 Gene3D G3DSA:2.30.30.60 595 644 5.4E-15 T 23-04-2016 CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 609 643 - T 23-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 PANTHER PTHR30347:SF3 371 746 3.8E-90 T 23-04-2016 CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 SUPERFAMILY SSF50182 580 645 1.44E-16 T 23-04-2016 IPR010920 LSM domain CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 PANTHER PTHR30347 371 746 3.8E-90 T 23-04-2016 CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 SUPERFAMILY SSF82689 649 746 9.02E-28 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 SUPERFAMILY SSF82861 495 578 6.41E-13 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 Gene3D G3DSA:3.30.70.100 652 734 1.4E-22 T 23-04-2016 CYCME_RS09490 a38f08e829be79b8cbb5f8cf0dc8361c 758 Pfam PF00924 Mechanosensitive ion channel 537 736 4.6E-55 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CYCME_RS04885 29a828e5fdc7841a9787e7178b6c5d92 161 Gene3D G3DSA:3.10.450.50 4 155 7.2E-30 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS04885 29a828e5fdc7841a9787e7178b6c5d92 161 Pfam PF13577 SnoaL-like domain 11 144 1.1E-14 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain CYCME_RS04885 29a828e5fdc7841a9787e7178b6c5d92 161 SUPERFAMILY SSF54427 7 161 6.33E-48 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS08980 e62018690b7ae8ad17019f81309fac4b 270 Hamap MF_01805 Segregation and condensation protein A [scpA]. 37 269 22.089 T 23-04-2016 IPR003768 Segregation and condensation protein A CYCME_RS08980 e62018690b7ae8ad17019f81309fac4b 270 Pfam PF02616 Segregation and condensation protein ScpA 54 266 8.5E-33 T 23-04-2016 IPR003768 Segregation and condensation protein A CYCME_RS08980 e62018690b7ae8ad17019f81309fac4b 270 PANTHER PTHR33969:SF2 21 270 5.0E-83 T 23-04-2016 CYCME_RS08980 e62018690b7ae8ad17019f81309fac4b 270 PANTHER PTHR33969 21 270 5.0E-83 T 23-04-2016 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 Gene3D G3DSA:3.40.50.920 710 891 8.6E-73 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624 484 539 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624 80 298 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624 366 457 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624 791 874 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624 557 772 0.0 T 23-04-2016 IPR033247 Transketolase family CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 SUPERFAMILY SSF52518 63 471 1.84E-129 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 205 301 4.7E-7 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 SUPERFAMILY SSF52518 476 704 5.3E-97 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PIRSF PIRSF000156 7 892 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624:SF67 484 539 0.0 T 23-04-2016 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624:SF67 80 298 0.0 T 23-04-2016 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624:SF67 366 457 0.0 T 23-04-2016 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624:SF67 791 874 0.0 T 23-04-2016 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 PANTHER PTHR11624:SF67 557 772 0.0 T 23-04-2016 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 SUPERFAMILY SSF52922 705 891 1.44E-55 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 Gene3D G3DSA:3.40.50.970 63 470 2.2E-146 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 12 891 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CYCME_RS02605 8cd5315143643cc56ebae98a00127691 892 Gene3D G3DSA:3.40.50.970 475 708 4.0E-119 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.8E-27 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 Gene3D G3DSA:4.10.520.10 1 94 8.9E-32 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 2 92 2.3E-44 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 PANTHER PTHR33175 1 99 1.2E-45 T 23-04-2016 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 PANTHER PTHR33175:SF5 1 99 1.2E-45 T 23-04-2016 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.1E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.1E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.1E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 SUPERFAMILY SSF47729 1 94 6.33E-29 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.573 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CYCME_RS09250 a8cb11124d7c98405a4b9b70778834c3 100 SMART SM00411 1 91 5.4E-39 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS04715 527852036520bdf1562e8cedbff2ce63 391 Gene3D G3DSA:3.90.1150.10 255 387 3.1E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS04715 527852036520bdf1562e8cedbff2ce63 391 PANTHER PTHR11751:SF401 9 386 1.3E-155 T 23-04-2016 CYCME_RS04715 527852036520bdf1562e8cedbff2ce63 391 SUPERFAMILY SSF53383 8 386 6.59E-106 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS04715 527852036520bdf1562e8cedbff2ce63 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CYCME_RS04715 527852036520bdf1562e8cedbff2ce63 391 PANTHER PTHR11751 9 386 1.3E-155 T 23-04-2016 CYCME_RS04715 527852036520bdf1562e8cedbff2ce63 391 Pfam PF00155 Aminotransferase class I and II 34 382 9.0E-66 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CYCME_RS04715 527852036520bdf1562e8cedbff2ce63 391 Gene3D G3DSA:3.40.640.10 48 254 6.4E-60 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS06020 290b52f730ca972b68a0cf3f1b1c6a04 248 Gene3D G3DSA:3.40.50.620 1 244 5.1E-101 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS06020 290b52f730ca972b68a0cf3f1b1c6a04 248 PIRSF PIRSF000090 1 248 1.3E-81 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CYCME_RS06020 290b52f730ca972b68a0cf3f1b1c6a04 248 SUPERFAMILY SSF52402 1 242 3.21E-83 T 23-04-2016 CYCME_RS06020 290b52f730ca972b68a0cf3f1b1c6a04 248 SMART SM00893 23 211 3.7E-66 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CYCME_RS06020 290b52f730ca972b68a0cf3f1b1c6a04 248 Pfam PF01012 Electron transfer flavoprotein domain 26 206 2.9E-50 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CYCME_RS06020 290b52f730ca972b68a0cf3f1b1c6a04 248 PANTHER PTHR21294:SF8 1 248 8.2E-143 T 23-04-2016 CYCME_RS06020 290b52f730ca972b68a0cf3f1b1c6a04 248 PANTHER PTHR21294 1 248 8.2E-143 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CYCME_RS07935 670f54c37d3a84ad19af1dac9515f125 168 Gene3D G3DSA:3.10.450.50 2 161 2.7E-38 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS07935 670f54c37d3a84ad19af1dac9515f125 168 PANTHER PTHR41534:SF1 3 168 1.1E-27 T 23-04-2016 CYCME_RS07935 670f54c37d3a84ad19af1dac9515f125 168 PANTHER PTHR41534 3 168 1.1E-27 T 23-04-2016 CYCME_RS07935 670f54c37d3a84ad19af1dac9515f125 168 SUPERFAMILY SSF54427 6 168 1.11E-40 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS07935 670f54c37d3a84ad19af1dac9515f125 168 Pfam PF00866 Ring hydroxylating beta subunit 20 160 2.9E-29 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS12115 ee16426d5c5f683cb59a9cd987834192 391 PANTHER PTHR30071 100 391 2.9E-71 T 23-04-2016 CYCME_RS12115 ee16426d5c5f683cb59a9cd987834192 391 Pfam PF01578 Cytochrome C assembly protein 176 386 3.6E-51 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CYCME_RS12115 ee16426d5c5f683cb59a9cd987834192 391 PANTHER PTHR30071:SF5 100 391 2.9E-71 T 23-04-2016 CYCME_RS12115 ee16426d5c5f683cb59a9cd987834192 391 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 147 389 2.8E-78 T 23-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 CYCME_RS04010 d36997f0dc78e780152adba91ec526f0 185 PANTHER PTHR37481:SF1 4 185 9.0E-24 T 23-04-2016 CYCME_RS04010 d36997f0dc78e780152adba91ec526f0 185 PANTHER PTHR37481 4 185 9.0E-24 T 23-04-2016 CYCME_RS04010 d36997f0dc78e780152adba91ec526f0 185 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 181 2.8E-39 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CYCME_RS04010 d36997f0dc78e780152adba91ec526f0 185 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 7 183 9.0E-36 T 23-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related CYCME_RS06465 4429cf45a8b38ab2bfbe3cfb341259a7 467 SUPERFAMILY SSF56954 10 447 3.01E-45 T 23-04-2016 CYCME_RS06465 4429cf45a8b38ab2bfbe3cfb341259a7 467 Pfam PF02321 Outer membrane efflux protein 35 215 1.8E-8 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS06465 4429cf45a8b38ab2bfbe3cfb341259a7 467 Pfam PF02321 Outer membrane efflux protein 275 448 2.4E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS06465 4429cf45a8b38ab2bfbe3cfb341259a7 467 Gene3D G3DSA:1.20.1600.10 31 447 2.6E-24 T 23-04-2016 CYCME_RS06185 4d87a7b2f82f8fa19859dea58d23b04f 109 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 103 27.183 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CYCME_RS06185 4d87a7b2f82f8fa19859dea58d23b04f 109 PANTHER PTHR33473 4 106 1.8E-35 T 23-04-2016 CYCME_RS06185 4d87a7b2f82f8fa19859dea58d23b04f 109 SUPERFAMILY SSF54736 23 107 1.83E-30 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CYCME_RS06185 4d87a7b2f82f8fa19859dea58d23b04f 109 Gene3D G3DSA:3.30.1390.10 9 107 9.7E-41 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CYCME_RS06185 4d87a7b2f82f8fa19859dea58d23b04f 109 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 26 104 1.3E-33 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 206 52.986 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 181 2.8E-55 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 Gene3D G3DSA:3.40.190.10 1 115 1.9E-32 T 23-04-2016 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 Pfam PF01634 ATP phosphoribosyltransferase 51 202 7.9E-50 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 PANTHER PTHR21403 1 209 1.1E-82 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 SUPERFAMILY SSF53850 1 203 1.28E-63 T 23-04-2016 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 Gene3D G3DSA:3.40.190.10 116 175 3.8E-28 T 23-04-2016 CYCME_RS04055 f181af67aefeacae5e6c8310c88dbf42 209 PANTHER PTHR21403:SF3 1 209 1.1E-82 T 23-04-2016 CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 355 56.976 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 352 4.0E-181 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 SUPERFAMILY SSF51735 4 351 6.28E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 345 5.0E-159 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 PANTHER PTHR10366 309 362 3.2E-212 T 23-04-2016 CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 PANTHER PTHR10366 5 283 3.2E-212 T 23-04-2016 CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 Gene3D G3DSA:3.90.25.10 194 248 2.3E-51 T 23-04-2016 CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 Gene3D G3DSA:3.90.25.10 303 359 2.3E-51 T 23-04-2016 CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 Gene3D G3DSA:3.40.50.720 2 192 3.6E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 PANTHER PTHR10366:SF429 309 362 3.2E-212 T 23-04-2016 CYCME_RS10990 af57bcc0ffe09080977440700c84dc2e 371 PANTHER PTHR10366:SF429 5 283 3.2E-212 T 23-04-2016 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 SMART SM00448 4 117 4.1E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 226 9.8E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 Pfam PF00072 Response regulator receiver domain 6 117 3.8E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 PANTHER PTHR26402:SF576 4 229 7.0E-105 T 23-04-2016 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 PANTHER PTHR26402 4 229 7.0E-105 T 23-04-2016 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 Gene3D G3DSA:1.10.10.10 129 227 2.6E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 226 2.4E-93 T 23-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 SMART SM00862 151 226 1.1E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 SUPERFAMILY SSF46894 127 227 2.92E-31 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 Gene3D G3DSA:3.40.50.2300 2 128 1.1E-38 T 23-04-2016 CYCME_RS11495 b1ab8690f91a414a8dc30425583d524d 231 SUPERFAMILY SSF52172 2 129 4.7E-38 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 SUPERFAMILY SSF55681 5 318 6.37E-99 T 23-04-2016 CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 Pfam PF03129 Anticodon binding domain 331 419 2.4E-11 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 SUPERFAMILY SSF52954 328 419 2.72E-19 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 408 6.7E-150 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 PANTHER PTHR11476:SF9 1 419 1.3E-208 T 23-04-2016 CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 Pfam PF13393 Histidyl-tRNA synthetase 10 312 7.3E-46 T 23-04-2016 CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 Gene3D G3DSA:3.40.50.800 326 419 2.8E-25 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 419 32.27 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 PIRSF PIRSF001549 1 421 1.2E-117 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 Gene3D G3DSA:3.30.930.10 3 185 2.6E-92 T 23-04-2016 CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 Gene3D G3DSA:3.30.930.10 221 320 2.6E-92 T 23-04-2016 CYCME_RS09695 9f66bb30f5d939c0bb31b24f6797b515 421 PANTHER PTHR11476 1 419 1.3E-208 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CYCME_RS04380 55f3bda2ad3441bc211ba171dad1667f 154 SMART SM00267 3 154 3.8E-4 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS04380 55f3bda2ad3441bc211ba171dad1667f 154 Pfam PF00990 Diguanylate cyclase, GGDEF domain 12 152 3.8E-12 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS04380 55f3bda2ad3441bc211ba171dad1667f 154 SUPERFAMILY SSF55073 13 149 1.88E-15 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS04380 55f3bda2ad3441bc211ba171dad1667f 154 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 11 147 6.1E-12 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS04380 55f3bda2ad3441bc211ba171dad1667f 154 Gene3D G3DSA:3.30.70.270 12 149 1.5E-16 T 23-04-2016 CYCME_RS05925 3a0fcc803d91a990168a91199d51ad21 268 Gene3D G3DSA:3.90.226.10 9 207 1.9E-51 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05925 3a0fcc803d91a990168a91199d51ad21 268 Gene3D G3DSA:1.10.12.10 213 266 6.0E-13 T 23-04-2016 IPR014748 Crontonase, C-terminal CYCME_RS05925 3a0fcc803d91a990168a91199d51ad21 268 PANTHER PTHR11941:SF86 1 266 4.3E-67 T 23-04-2016 CYCME_RS05925 3a0fcc803d91a990168a91199d51ad21 268 PANTHER PTHR11941 1 266 4.3E-67 T 23-04-2016 CYCME_RS05925 3a0fcc803d91a990168a91199d51ad21 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 266 3.8E-46 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CYCME_RS05925 3a0fcc803d91a990168a91199d51ad21 268 SUPERFAMILY SSF52096 6 266 3.09E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 PANTHER PTHR23083 234 390 6.3E-17 T 23-04-2016 CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 SMART SM00028 257 290 0.37 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 SMART SM00028 223 256 55.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 SMART SM00028 358 391 2.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 SMART SM00028 324 357 9.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 Gene3D G3DSA:1.25.40.10 229 391 8.6E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 Pfam PF13181 Tetratricopeptide repeat 362 390 0.019 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 Pfam PF13432 Tetratricopeptide repeat 228 285 7.8E-6 T 23-04-2016 CYCME_RS02695 39a3433b8e148711aa28245ff60a10d8 411 SUPERFAMILY SSF48452 227 391 1.64E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 159 2.5E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 Pfam PF08281 Sigma-70, region 4 105 156 6.2E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 Gene3D G3DSA:1.10.1740.10 6 101 3.6E-21 T 23-04-2016 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 Pfam PF04542 Sigma-70 region 2 13 75 1.7E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 SUPERFAMILY SSF88946 4 93 3.45E-20 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 PANTHER PTHR30173 9 161 1.2E-31 T 23-04-2016 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 35 66 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 SUPERFAMILY SSF88659 104 160 1.87E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS02475 c065dd1749ccc95eca2c1dc0dafe7075 169 Gene3D G3DSA:1.10.10.10 103 163 1.1E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08840 60429c1e3e179a39cbb3c84d9343025b 396 Gene3D G3DSA:3.90.1150.10 276 394 4.1E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS08840 60429c1e3e179a39cbb3c84d9343025b 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CYCME_RS08840 60429c1e3e179a39cbb3c84d9343025b 396 PANTHER PTHR11751 15 395 3.8E-165 T 23-04-2016 CYCME_RS08840 60429c1e3e179a39cbb3c84d9343025b 396 SUPERFAMILY SSF53383 4 394 9.41E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS08840 60429c1e3e179a39cbb3c84d9343025b 396 PANTHER PTHR11751:SF306 15 395 3.8E-165 T 23-04-2016 CYCME_RS08840 60429c1e3e179a39cbb3c84d9343025b 396 Pfam PF00155 Aminotransferase class I and II 33 389 4.3E-72 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CYCME_RS08840 60429c1e3e179a39cbb3c84d9343025b 396 Gene3D G3DSA:3.40.640.10 46 275 7.0E-72 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 Gene3D G3DSA:3.40.50.1220 193 364 1.1E-66 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 Gene3D G3DSA:3.40.50.970 365 569 1.5E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 PANTHER PTHR18968:SF116 2 570 0.0 T 23-04-2016 CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 565 3.1E-263 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 541 1.5E-48 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 SUPERFAMILY SSF52467 189 360 4.36E-65 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 SUPERFAMILY SSF52518 3 182 1.22E-65 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.2E-59 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 327 1.3E-48 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 SUPERFAMILY SSF52518 370 571 4.37E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 PANTHER PTHR18968 2 570 0.0 T 23-04-2016 CYCME_RS12100 8bf146bf07b47e8989587cfab8d7054a 576 Gene3D G3DSA:3.40.50.970 3 179 1.8E-75 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 SUPERFAMILY SSF56059 104 305 2.65E-54 T 23-04-2016 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 PIRSF PIRSF039102 48 312 4.9E-83 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 11 307 32.994 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 249 277 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 Gene3D G3DSA:3.40.50.20 12 92 3.5E-26 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 71 82 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 Gene3D G3DSA:3.30.1490.20 115 182 6.9E-20 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 12 306 8.5E-101 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 Pfam PF07478 D-ala D-ala ligase C-terminus 114 304 3.9E-58 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 Pfam PF01820 D-ala D-ala ligase N-terminus 12 94 8.8E-20 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 Gene3D G3DSA:3.30.470.20 93 111 2.4E-48 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 Gene3D G3DSA:3.30.470.20 183 305 2.4E-48 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 PANTHER PTHR23132 12 309 2.2E-86 T 23-04-2016 CYCME_RS11105 bf8ad9859c2c5c5d76e25ca955b3ff37 312 SUPERFAMILY SSF52440 12 104 9.02E-28 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 170 190 1.7E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 82 101 1.7E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 215 240 1.7E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 191 212 1.7E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 82 1.7E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 43 62 1.7E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PANTHER PTHR30587:SF0 1 243 7.9E-114 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 163 175 3.4E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 113 127 3.4E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 41 50 3.4E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 231 241 3.4E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 101 113 3.4E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 141 153 3.4E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 218 230 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 170 185 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 PANTHER PTHR30587 1 243 7.9E-114 T 23-04-2016 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 Pfam PF00813 FliP family 45 237 1.0E-79 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CYCME_RS04530 741b89a1ab8381599f40f5c72a9eadc0 243 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 45 241 1.9E-85 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 SMART SM00490 505 589 6.7E-22 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 Gene3D G3DSA:3.40.50.300 455 637 2.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 PANTHER PTHR24031:SF249 300 603 3.4E-120 T 23-04-2016 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 PANTHER PTHR24031:SF249 257 283 3.4E-120 T 23-04-2016 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 SMART SM00487 266 460 7.9E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 Gene3D G3DSA:2.40.50.140 46 141 7.8E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 PANTHER PTHR24031 300 603 3.4E-120 T 23-04-2016 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 PANTHER PTHR24031 257 283 3.4E-120 T 23-04-2016 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 PANTHER PTHR24031 626 677 3.4E-120 T 23-04-2016 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 Gene3D G3DSA:3.40.50.300 257 454 4.4E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 661 7.6E-222 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 PANTHER PTHR24031:SF249 626 677 3.4E-120 T 23-04-2016 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 Pfam PF00270 DEAD/DEAH box helicase 271 434 1.1E-16 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 SUPERFAMILY SSF52540 188 454 1.36E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 Pfam PF00271 Helicase conserved C-terminal domain 468 588 3.9E-19 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 Pfam PF17191 RecG wedge domain 9 171 4.4E-19 T 23-04-2016 IPR033454 RecG, wedge domain CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 Gene3D G3DSA:1.10.150.20 1 36 3.8E-7 T 23-04-2016 CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 SUPERFAMILY SSF52540 291 343 1.5E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 SUPERFAMILY SSF52540 508 653 1.5E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03055 b5b087ef832f079682d7389e3ae72285 693 SUPERFAMILY SSF50249 7 174 6.85E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS10080 b9029493cf35940b81d8932a57bd2ed1 481 SMART SM00479 4 197 2.8E-4 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CYCME_RS10080 b9029493cf35940b81d8932a57bd2ed1 481 SUPERFAMILY SSF53098 4 472 1.38E-123 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS10080 b9029493cf35940b81d8932a57bd2ed1 481 Gene3D G3DSA:3.30.420.10 3 195 1.2E-79 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS10080 b9029493cf35940b81d8932a57bd2ed1 481 PIRSF PIRSF000977 1 479 9.2E-200 T 23-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 CYCME_RS10080 b9029493cf35940b81d8932a57bd2ed1 481 Pfam PF00929 Exonuclease 7 187 6.8E-22 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CYCME_RS10080 b9029493cf35940b81d8932a57bd2ed1 481 PANTHER PTHR11046 4 474 3.1E-209 T 23-04-2016 CYCME_RS10080 b9029493cf35940b81d8932a57bd2ed1 481 PANTHER PTHR11046:SF2 4 474 3.1E-209 T 23-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 CYCME_RS10080 b9029493cf35940b81d8932a57bd2ed1 481 Pfam PF08411 Exonuclease C-terminal 206 472 2.5E-95 T 23-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 CYCME_RS03860 753a9ccbb8f554966eba687f2d00d950 244 SMART SM00382 29 212 8.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS03860 753a9ccbb8f554966eba687f2d00d950 244 PANTHER PTHR24220 6 222 7.6E-72 T 23-04-2016 CYCME_RS03860 753a9ccbb8f554966eba687f2d00d950 244 Pfam PF00005 ABC transporter 20 163 3.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS03860 753a9ccbb8f554966eba687f2d00d950 244 Gene3D G3DSA:3.40.50.300 4 223 2.9E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03860 753a9ccbb8f554966eba687f2d00d950 244 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 4 239 4.1E-106 T 23-04-2016 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system CYCME_RS03860 753a9ccbb8f554966eba687f2d00d950 244 SUPERFAMILY SSF52540 5 224 8.21E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08990 d4f0645399d3e19aa28dbfb83783255a 104 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 7.2E-39 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 CYCME_RS08990 d4f0645399d3e19aa28dbfb83783255a 104 PANTHER PTHR36540 2 104 4.8E-45 T 23-04-2016 CYCME_RS08990 d4f0645399d3e19aa28dbfb83783255a 104 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 10 103 28.724 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 CYCME_RS08990 d4f0645399d3e19aa28dbfb83783255a 104 Gene3D G3DSA:2.60.120.10 10 102 1.8E-38 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS08990 d4f0645399d3e19aa28dbfb83783255a 104 PANTHER PTHR36540:SF1 2 104 4.8E-45 T 23-04-2016 CYCME_RS08990 d4f0645399d3e19aa28dbfb83783255a 104 SUPERFAMILY SSF51182 10 102 2.16E-35 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS07860 6bfd27fdcc2ce8d40053a06c46d721df 167 Pfam PF04214 Protein of unknown function, DUF 69 137 6.6E-29 T 23-04-2016 IPR007332 Protein of unknown function DUF411 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Gene3D G3DSA:2.70.150.10 27 63 9.4E-37 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Gene3D G3DSA:2.70.150.10 117 230 9.4E-37 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Gene3D G3DSA:3.40.1110.10 322 543 1.3E-49 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 SUPERFAMILY SSF81660 339 540 1.7E-48 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Pfam PF00122 E1-E2 ATPase 89 323 6.3E-66 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Gene3D G3DSA:1.20.1110.10 606 894 2.2E-102 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Gene3D G3DSA:1.20.1110.10 64 116 2.2E-102 T 23-04-2016 IPR023298 P-type ATPase, transmembrane domain CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Pfam PF00690 Cation transporter/ATPase, N-terminus 12 78 1.3E-14 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 SUPERFAMILY SSF81665 232 326 1.24E-117 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 SUPERFAMILY SSF81665 10 122 1.24E-117 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 SUPERFAMILY SSF81665 687 895 1.24E-117 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 SMART SM00831 11 84 2.2E-30 T 23-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 SUPERFAMILY SSF81653 122 230 8.76E-30 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 637 653 8.9E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 669 694 8.9E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 609 625 8.9E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 494 512 8.9E-18 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PANTHER PTHR24093 26 902 7.1E-283 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Pfam PF00689 Cation transporting ATPase, C-terminus 722 892 1.9E-39 T 23-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 SUPERFAMILY SSF56784 491 741 3.41E-58 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 SUPERFAMILY SSF56784 330 350 3.41E-58 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 195 5.7E-19 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 237 351 1.2E-22 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 608 727 9.2E-34 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 661 673 1.3E-39 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 547 1.3E-39 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 1.3E-39 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 568 1.3E-39 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 637 656 1.3E-39 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 169 183 1.3E-39 T 23-04-2016 CYCME_RS08680 bbb720b66195d0f2e77ab53f1d5e5dc4 904 Pfam PF00702 haloacid dehalogenase-like hydrolase 329 651 6.7E-22 T 23-04-2016 CYCME_RS05110 eb975075d8f5853c5b208dbab48c1b53 266 SUPERFAMILY SSF48256 29 240 8.24E-8 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 7.5E-40 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 85 4.0E-23 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 SUPERFAMILY SSF46604 87 136 1.12E-13 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 SUPERFAMILY SSF51344 3 85 3.66E-22 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 131 1.1E-11 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 Gene3D G3DSA:1.20.5.440 91 132 2.3E-16 T 23-04-2016 CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 PANTHER PTHR13822 1 136 3.3E-40 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 Gene3D G3DSA:2.60.15.10 3 90 8.2E-30 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 20.746 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12280 7b9a7559465ba1e54a66db1368c9ee9f 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 1.9E-27 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 487 505 1.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 525 547 1.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PRINTS PR00985 Leucyl-tRNA synthetase signature 558 568 1.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 SUPERFAMILY SSF52374 416 623 1.25E-151 T 23-04-2016 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 SUPERFAMILY SSF52374 5 226 1.25E-151 T 23-04-2016 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 816 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 816 23.453 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.5E-78 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Pfam PF08264 Anticodon-binding domain of tRNA 655 778 2.0E-17 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Gene3D G3DSA:3.90.740.10 223 424 2.3E-61 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 1.4E-27 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 615 1.7E-23 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PANTHER PTHR11946 240 816 0.0 T 23-04-2016 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PANTHER PTHR11946 1 206 0.0 T 23-04-2016 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 SUPERFAMILY SSF47323 620 816 8.41E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Gene3D G3DSA:1.10.730.10 605 752 1.7E-42 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PANTHER PTHR11946:SF7 240 816 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 PANTHER PTHR11946:SF7 1 206 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Gene3D G3DSA:3.40.50.620 4 222 1.2E-157 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 Gene3D G3DSA:3.40.50.620 425 604 1.2E-157 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS03910 c2da4ae1373818d2e6278340607b9a35 816 SUPERFAMILY SSF50677 226 415 9.0E-58 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.9E-107 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 Gene3D G3DSA:1.10.287.80 202 235 3.8E-39 T 23-04-2016 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 Gene3D G3DSA:1.10.287.80 19 60 3.8E-39 T 23-04-2016 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 Pfam PF00231 ATP synthase 5 286 1.1E-90 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.8E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.8E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.8E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.8E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 SUPERFAMILY SSF52943 5 287 2.35E-93 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.512 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 Gene3D G3DSA:1.10.287.80 236 282 4.5E-30 T 23-04-2016 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 PANTHER PTHR11693 1 287 1.6E-121 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CYCME_RS12290 137fbecb44c5fa7fd524c4ea16ae3281 287 Gene3D G3DSA:3.40.1380.10 63 191 1.3E-39 T 23-04-2016 CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 SUPERFAMILY SSF63411 255 448 1.43E-34 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 Gene3D G3DSA:3.30.830.10 255 439 1.8E-27 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 61 84 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 SUPERFAMILY SSF63411 31 240 4.37E-60 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 PANTHER PTHR11851 30 446 1.1E-96 T 23-04-2016 CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 Pfam PF05193 Peptidase M16 inactive domain 196 376 2.9E-27 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 PANTHER PTHR11851:SF136 30 446 1.1E-96 T 23-04-2016 CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 Pfam PF00675 Insulinase (Peptidase family M16) 41 186 3.1E-22 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CYCME_RS03165 0ac269ed09d2f4878b05d00d239292dc 450 Gene3D G3DSA:3.30.830.10 27 240 1.5E-57 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CYCME_RS04540 e3ebb64df666af63c6c02cb6d2db1aa3 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 252 1.5E-69 T 23-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CYCME_RS04540 e3ebb64df666af63c6c02cb6d2db1aa3 259 Pfam PF01311 Bacterial export proteins, family 1 14 245 6.6E-66 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CYCME_RS04540 e3ebb64df666af63c6c02cb6d2db1aa3 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.3E-28 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CYCME_RS04540 e3ebb64df666af63c6c02cb6d2db1aa3 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.3E-28 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CYCME_RS04540 e3ebb64df666af63c6c02cb6d2db1aa3 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.3E-28 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CYCME_RS04540 e3ebb64df666af63c6c02cb6d2db1aa3 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.3E-28 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CYCME_RS04540 e3ebb64df666af63c6c02cb6d2db1aa3 259 PANTHER PTHR30065:SF1 1 259 2.6E-74 T 23-04-2016 CYCME_RS04540 e3ebb64df666af63c6c02cb6d2db1aa3 259 PANTHER PTHR30065 1 259 2.6E-74 T 23-04-2016 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Gene3D G3DSA:3.40.50.300 285 378 2.1E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Gene3D G3DSA:3.30.1360.120 2 120 2.8E-42 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Gene3D G3DSA:3.40.50.300 186 245 9.1E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 450 2.2E-108 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Gene3D G3DSA:1.20.120.430 121 181 4.6E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Gene3D G3DSA:1.20.120.430 380 450 4.6E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Gene3D G3DSA:1.20.120.430 246 270 4.6E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 450 31.718 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 PANTHER PTHR11649 8 450 2.0E-153 T 23-04-2016 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 SUPERFAMILY SSF116878 120 219 7.32E-48 T 23-04-2016 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 SUPERFAMILY SSF116878 375 450 7.32E-48 T 23-04-2016 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 SUPERFAMILY SSF52540 187 368 4.78E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 SUPERFAMILY SSF52540 72 151 4.78E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Pfam PF12631 MnmE helical domain 122 447 5.9E-54 T 23-04-2016 IPR025867 MnmE, helical domain CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 119 5.0E-37 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 365 1.1E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 PANTHER PTHR11649:SF56 8 450 2.0E-153 T 23-04-2016 CYCME_RS12520 c42afb36bf434184d3b06efc3dd39844 450 Pfam PF01926 50S ribosome-binding GTPase 218 331 5.0E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS04110 9604fa780f649dc815a84401aaa720be 529 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 31 495 2.0E-137 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 CYCME_RS04110 9604fa780f649dc815a84401aaa720be 529 PANTHER PTHR32057 1 529 9.4E-213 T 23-04-2016 CYCME_RS04110 9604fa780f649dc815a84401aaa720be 529 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 511 40.188 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 CYCME_RS00805 c03d688857c49aef20403e97f18bba94 341 Pfam PF03116 NQR2, RnfD, RnfE family 5 339 3.8E-105 T 23-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CYCME_RS00805 c03d688857c49aef20403e97f18bba94 341 PANTHER PTHR30578:SF0 3 340 7.1E-122 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CYCME_RS00805 c03d688857c49aef20403e97f18bba94 341 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 341 26.915 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CYCME_RS00805 c03d688857c49aef20403e97f18bba94 341 PANTHER PTHR30578 3 340 7.1E-122 T 23-04-2016 CYCME_RS00805 c03d688857c49aef20403e97f18bba94 341 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 340 4.4E-125 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CYCME_RS08040 b403e185a21f5cb024823ca6645cbc60 449 Gene3D G3DSA:1.10.3720.10 221 446 4.3E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS08040 b403e185a21f5cb024823ca6645cbc60 449 SUPERFAMILY SSF161098 230 428 2.88E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS08040 b403e185a21f5cb024823ca6645cbc60 449 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 245 447 3.8E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS08040 b403e185a21f5cb024823ca6645cbc60 449 PANTHER PTHR30465:SF2 210 448 6.7E-89 T 23-04-2016 CYCME_RS08040 b403e185a21f5cb024823ca6645cbc60 449 PANTHER PTHR30465:SF2 24 124 6.7E-89 T 23-04-2016 CYCME_RS08040 b403e185a21f5cb024823ca6645cbc60 449 PANTHER PTHR30465 210 448 6.7E-89 T 23-04-2016 CYCME_RS08040 b403e185a21f5cb024823ca6645cbc60 449 PANTHER PTHR30465 24 124 6.7E-89 T 23-04-2016 CYCME_RS00820 7d55189ec5ce442bb4c3449f493fb9e1 193 PANTHER PTHR30335:SF0 2 193 1.8E-122 T 23-04-2016 CYCME_RS00820 7d55189ec5ce442bb4c3449f493fb9e1 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 25.671 T 23-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CYCME_RS00820 7d55189ec5ce442bb4c3449f493fb9e1 193 PANTHER PTHR30335 2 193 1.8E-122 T 23-04-2016 CYCME_RS00820 7d55189ec5ce442bb4c3449f493fb9e1 193 PIRSF PIRSF006102 1 193 3.4E-59 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CYCME_RS00820 7d55189ec5ce442bb4c3449f493fb9e1 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 191 3.7E-60 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CYCME_RS00820 7d55189ec5ce442bb4c3449f493fb9e1 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 6.0E-88 T 23-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CYCME_RS00860 58daddf5004d455a83c6bbceda5664b7 153 PIRSF PIRSF000847 1 151 7.0E-36 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CYCME_RS00860 58daddf5004d455a83c6bbceda5664b7 153 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 38 2.6E-9 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CYCME_RS00860 58daddf5004d455a83c6bbceda5664b7 153 PANTHER PTHR14269 1 141 2.5E-17 T 23-04-2016 CYCME_RS07350 27ae14082a7128403480021598972e8b 403 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 53.445 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07350 27ae14082a7128403480021598972e8b 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 386 2.0E-48 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS07350 27ae14082a7128403480021598972e8b 403 Gene3D G3DSA:3.40.50.1100 106 185 7.2E-22 T 23-04-2016 CYCME_RS07350 27ae14082a7128403480021598972e8b 403 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07350 27ae14082a7128403480021598972e8b 403 PANTHER PTHR10314:SF3 15 399 3.6E-234 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07350 27ae14082a7128403480021598972e8b 403 SUPERFAMILY SSF53686 11 396 1.44E-151 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS07350 27ae14082a7128403480021598972e8b 403 PIRSF PIRSF001413 2 403 1.3E-167 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07350 27ae14082a7128403480021598972e8b 403 PANTHER PTHR10314 15 399 3.6E-234 T 23-04-2016 CYCME_RS07350 27ae14082a7128403480021598972e8b 403 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 397 2.5E-192 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CYCME_RS07350 27ae14082a7128403480021598972e8b 403 Gene3D G3DSA:3.40.50.1100 186 398 4.3E-97 T 23-04-2016 CYCME_RS01910 be7314d257a02ee03e273d1bb5f854d5 281 PANTHER PTHR10366 3 281 4.3E-19 T 23-04-2016 CYCME_RS01910 be7314d257a02ee03e273d1bb5f854d5 281 Gene3D G3DSA:3.40.50.720 8 231 4.0E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01910 be7314d257a02ee03e273d1bb5f854d5 281 SUPERFAMILY SSF51735 7 278 4.11E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01910 be7314d257a02ee03e273d1bb5f854d5 281 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 128 1.7E-6 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CYCME_RS01910 be7314d257a02ee03e273d1bb5f854d5 281 PANTHER PTHR10366:SF430 3 281 4.3E-19 T 23-04-2016 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 PRINTS PR00607 Class IE cytochrome C signature 101 111 3.0E-12 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 PRINTS PR00607 Class IE cytochrome C signature 129 141 3.0E-12 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 PRINTS PR00607 Class IE cytochrome C signature 144 155 3.0E-12 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 PRINTS PR00607 Class IE cytochrome C signature 90 101 3.0E-12 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 PANTHER PTHR40942 16 159 3.8E-29 T 23-04-2016 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 Gene3D G3DSA:1.10.760.10 81 156 2.2E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 SUPERFAMILY SSF46626 83 156 1.75E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 PANTHER PTHR40942:SF1 16 159 3.8E-29 T 23-04-2016 CYCME_RS01990 7c59a9341e7fbf3a86076e7c68a21775 159 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 81 154 7.3E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08790 6056bc1c9f8670f8b7b6a5329a52fe33 117 Pfam PF13411 MerR HTH family regulatory protein 19 87 3.1E-21 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS08790 6056bc1c9f8670f8b7b6a5329a52fe33 117 Gene3D G3DSA:1.10.1660.10 19 115 3.9E-16 T 23-04-2016 CYCME_RS08790 6056bc1c9f8670f8b7b6a5329a52fe33 117 SMART SM00422 19 89 2.5E-4 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS08790 6056bc1c9f8670f8b7b6a5329a52fe33 117 PANTHER PTHR30204 11 117 1.7E-31 T 23-04-2016 CYCME_RS08790 6056bc1c9f8670f8b7b6a5329a52fe33 117 SUPERFAMILY SSF46955 17 113 7.33E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS08790 6056bc1c9f8670f8b7b6a5329a52fe33 117 PANTHER PTHR30204:SF15 11 117 1.7E-31 T 23-04-2016 CYCME_RS01850 b1184aabdf0136805fedd79e24846d4b 477 Pfam PF00092 von Willebrand factor type A domain 12 152 1.4E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS01850 b1184aabdf0136805fedd79e24846d4b 477 Gene3D G3DSA:3.40.50.410 20 153 6.1E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS01850 b1184aabdf0136805fedd79e24846d4b 477 SUPERFAMILY SSF53300 11 168 6.53E-18 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 Gene3D G3DSA:1.10.1660.10 61 133 5.3E-27 T 23-04-2016 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 Gene3D G3DSA:1.10.1660.10 4 60 7.4E-25 T 23-04-2016 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 SMART SM00422 6 75 3.8E-25 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 Pfam PF13411 MerR HTH family regulatory protein 6 72 6.6E-19 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 1.2E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 1.2E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 7 18 1.2E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 PANTHER PTHR30204:SF18 1 126 1.6E-39 T 23-04-2016 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 PANTHER PTHR30204 1 126 1.6E-39 T 23-04-2016 CYCME_RS06620 500854729840e398c7772ad3f5c4fd65 137 SUPERFAMILY SSF46955 6 132 1.32E-33 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 Gene3D G3DSA:3.40.190.10 192 272 1.0E-19 T 23-04-2016 CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 Pfam PF03466 LysR substrate binding domain 104 301 5.7E-35 T 23-04-2016 IPR005119 LysR, substrate-binding CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 SUPERFAMILY SSF53850 105 302 1.09E-31 T 23-04-2016 CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 3.9E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 PANTHER PTHR30126 15 307 8.7E-63 T 23-04-2016 CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 5.8E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 5.8E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 5.8E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 SUPERFAMILY SSF46785 17 99 1.36E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 Gene3D G3DSA:1.10.10.10 18 92 2.7E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 PANTHER PTHR30126:SF11 15 307 8.7E-63 T 23-04-2016 CYCME_RS06165 4346bd92b2c9bc0f10fe633cdec4de19 308 Gene3D G3DSA:3.40.190.10 104 191 7.1E-17 T 23-04-2016 CYCME_RS05710 ff6b32a7952015d53e11f4ae07eab87a 244 PANTHER PTHR12029 4 178 2.1E-39 T 23-04-2016 CYCME_RS05710 ff6b32a7952015d53e11f4ae07eab87a 244 Gene3D G3DSA:3.40.1280.10 3 159 5.5E-36 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYCME_RS05710 ff6b32a7952015d53e11f4ae07eab87a 244 SUPERFAMILY SSF75217 4 168 1.05E-37 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CYCME_RS05710 ff6b32a7952015d53e11f4ae07eab87a 244 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 238 1.3E-71 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CYCME_RS05710 ff6b32a7952015d53e11f4ae07eab87a 244 Pfam PF00588 SpoU rRNA Methylase family 5 154 6.6E-36 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CYCME_RS05710 ff6b32a7952015d53e11f4ae07eab87a 244 PIRSF PIRSF004808 1 243 2.0E-74 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CYCME_RS09555 4ba5b83b1a15074d9964e811e9347adf 658 PANTHER PTHR30509:SF1 306 634 2.1E-66 T 23-04-2016 CYCME_RS09555 4ba5b83b1a15074d9964e811e9347adf 658 PANTHER PTHR30509:SF1 1 244 2.1E-66 T 23-04-2016 CYCME_RS09555 4ba5b83b1a15074d9964e811e9347adf 658 PANTHER PTHR30509 306 634 2.1E-66 T 23-04-2016 CYCME_RS09555 4ba5b83b1a15074d9964e811e9347adf 658 PANTHER PTHR30509 1 244 2.1E-66 T 23-04-2016 CYCME_RS09555 4ba5b83b1a15074d9964e811e9347adf 658 Pfam PF04632 Fusaric acid resistance protein family 7 653 2.4E-125 T 23-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CYCME_RS03365 43b8346ffc2098c0759de55c5f70f495 267 PIRSF PIRSF037318 2 267 4.5E-85 T 23-04-2016 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 CYCME_RS03365 43b8346ffc2098c0759de55c5f70f495 267 SUPERFAMILY SSF56112 36 237 6.13E-7 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS03365 43b8346ffc2098c0759de55c5f70f495 267 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 21 234 8.6E-44 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 Pfam PF00472 RF-1 domain 174 282 1.0E-39 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 1.0E-147 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 SUPERFAMILY SSF75620 2 307 1.2E-125 T 23-04-2016 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 Gene3D G3DSA:3.30.160.20 172 250 5.8E-38 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 Pfam PF03462 PCRF domain 2 165 9.6E-51 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 PANTHER PTHR11075:SF6 3 308 4.1E-148 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 Gene3D G3DSA:1.20.58.410 1 61 1.1E-12 T 23-04-2016 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 SMART SM00937 30 140 9.4E-55 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CYCME_RS07480 5bd44b92144f145dd8dd9bd2664554d4 310 PANTHER PTHR11075 3 308 4.1E-148 T 23-04-2016 CYCME_RS05310 f185bccf72068041e10ae0b3b034df41 116 PANTHER PTHR30041 1 115 1.2E-40 T 23-04-2016 CYCME_RS05310 f185bccf72068041e10ae0b3b034df41 116 PANTHER PTHR30041:SF3 1 115 1.2E-40 T 23-04-2016 CYCME_RS05310 f185bccf72068041e10ae0b3b034df41 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 5.1E-30 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR CYCME_RS05310 f185bccf72068041e10ae0b3b034df41 116 Gene3D G3DSA:3.40.30.10 3 114 1.2E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS05310 f185bccf72068041e10ae0b3b034df41 116 Pfam PF03960 ArsC family 6 112 9.8E-19 T 23-04-2016 IPR006660 Arsenate reductase-like CYCME_RS05310 f185bccf72068041e10ae0b3b034df41 116 SUPERFAMILY SSF52833 3 114 1.37E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 PIRSF PIRSF003107 4 225 2.0E-68 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 PANTHER PTHR10010:SF14 1 227 1.1E-76 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 Gene3D G3DSA:1.20.58.220 6 115 3.7E-32 T 23-04-2016 CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 PANTHER PTHR10010 1 227 1.1E-76 T 23-04-2016 CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 Gene3D G3DSA:1.20.58.220 125 231 2.3E-31 T 23-04-2016 CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 SUPERFAMILY SSF109755 10 230 9.21E-70 T 23-04-2016 CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 220 3.0E-69 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 Pfam PF01895 PhoU domain 23 109 4.8E-19 T 23-04-2016 IPR026022 PhoU domain CYCME_RS11465 110a3541d5e2801b225d02748f518b51 232 Pfam PF01895 PhoU domain 126 211 1.7E-15 T 23-04-2016 IPR026022 PhoU domain CYCME_RS12020 64b20c25ced9ddbd4702f271d48bf184 172 Pfam PF05713 Bacterial mobilisation protein (MobC) 109 144 1.7E-9 T 23-04-2016 IPR008687 Bacterial mobilisation CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Pfam PF00122 E1-E2 ATPase 281 499 1.8E-56 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 13 80 1.6E-18 T 23-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 SUPERFAMILY SSF56784 507 526 1.97E-42 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 SUPERFAMILY SSF56784 562 796 1.97E-42 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Gene3D G3DSA:3.40.50.1000 483 523 1.6E-42 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Gene3D G3DSA:3.40.50.1000 625 765 1.6E-42 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 282 774 7.4E-79 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Pfam PF00403 Heavy-metal-associated domain 98 156 2.8E-6 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PANTHER PTHR24093:SF50 89 801 2.0E-157 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 1.7E-22 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 360 374 1.7E-22 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 1.7E-22 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 1.7E-22 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 1.7E-22 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Gene3D G3DSA:3.40.1110.10 524 624 2.5E-5 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Gene3D G3DSA:3.30.70.100 92 161 2.2E-13 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 798 4.0E-151 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Gene3D G3DSA:2.70.150.10 249 411 3.3E-28 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 ProSitePatterns PS01047 Heavy-metal-associated domain. 99 128 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 230 800 3.5E-141 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 SUPERFAMILY SSF55008 90 164 6.68E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 SUPERFAMILY SSF81653 318 410 5.36E-24 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 711 1.7E-34 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00943 Copper-transporting ATPase signature 138 158 1.6E-7 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00943 Copper-transporting ATPase signature 279 298 1.6E-7 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00943 Copper-transporting ATPase signature 731 745 1.6E-7 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00943 Copper-transporting ATPase signature 491 506 1.6E-7 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PRINTS PR00943 Copper-transporting ATPase signature 674 691 1.6E-7 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 PANTHER PTHR24093 89 801 2.0E-157 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 SUPERFAMILY SSF81665 411 502 1.31E-9 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 SUPERFAMILY SSF81665 269 313 1.31E-9 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 SUPERFAMILY SSF81665 746 768 1.31E-9 T 23-04-2016 CYCME_RS08920 fdb03009d364e2543e16befddd70b1f2 818 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 283 798 6.2E-109 T 23-04-2016 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 SMART SM00937 66 180 1.2E-64 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 PANTHER PTHR11075:SF9 4 358 5.5E-175 T 23-04-2016 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 Gene3D G3DSA:3.30.160.20 213 291 9.8E-36 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 PANTHER PTHR11075 4 358 5.5E-175 T 23-04-2016 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 Pfam PF03462 PCRF domain 13 205 2.0E-72 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 Pfam PF00472 RF-1 domain 214 323 3.9E-43 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.454 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 359 1.0E-167 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 SUPERFAMILY SSF75620 12 355 7.46E-138 T 23-04-2016 CYCME_RS03520 79687a2e886123a48ebd1f5fc04f17c6 362 Gene3D G3DSA:1.20.58.410 7 95 1.3E-19 T 23-04-2016 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 SUPERFAMILY SSF88659 207 285 8.04E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 Gene3D G3DSA:1.10.10.10 226 283 4.9E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 Gene3D G3DSA:1.10.601.10 15 122 2.5E-34 T 23-04-2016 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 PANTHER PTHR30376 2 288 2.9E-101 T 23-04-2016 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 Pfam PF04542 Sigma-70 region 2 53 122 2.1E-14 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.6E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.6E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 PRINTS PR00046 Major sigma-70 factor signature 234 246 3.6E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 PRINTS PR00046 Major sigma-70 factor signature 101 109 3.6E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.6E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 2.2E-115 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 Pfam PF04545 Sigma-70, region 4 230 281 1.8E-13 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 283 1.3E-29 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS03145 f117720cb8ca054ef121233d1ccf89f2 289 SUPERFAMILY SSF88946 12 122 3.92E-37 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS10520 173c571a5851058a772d47252a53fbf5 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 220 55.761 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CYCME_RS10520 173c571a5851058a772d47252a53fbf5 224 PIRSF PIRSF006293 1 224 1.9E-83 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CYCME_RS10520 173c571a5851058a772d47252a53fbf5 224 PANTHER PTHR11587 3 222 3.1E-107 T 23-04-2016 CYCME_RS10520 173c571a5851058a772d47252a53fbf5 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 207 4.8E-64 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CYCME_RS10520 173c571a5851058a772d47252a53fbf5 224 PANTHER PTHR11587:SF3 3 222 3.1E-107 T 23-04-2016 CYCME_RS10520 173c571a5851058a772d47252a53fbf5 224 Gene3D G3DSA:3.40.50.620 3 223 1.2E-82 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS10520 173c571a5851058a772d47252a53fbf5 224 Pfam PF06508 Queuosine biosynthesis protein QueC 4 214 1.1E-81 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CYCME_RS10520 173c571a5851058a772d47252a53fbf5 224 SUPERFAMILY SSF52402 3 223 1.41E-65 T 23-04-2016 CYCME_RS09535 da1028f46b427741f70e36b715c85e16 304 PANTHER PTHR21621 21 301 1.2E-31 T 23-04-2016 CYCME_RS09535 da1028f46b427741f70e36b715c85e16 304 Gene3D G3DSA:3.30.1490.20 124 174 6.5E-9 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS09535 da1028f46b427741f70e36b715c85e16 304 SUPERFAMILY SSF56059 90 294 5.83E-35 T 23-04-2016 CYCME_RS09535 da1028f46b427741f70e36b715c85e16 304 Gene3D G3DSA:3.40.50.20 23 113 3.4E-5 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS09535 da1028f46b427741f70e36b715c85e16 304 PANTHER PTHR21621:SF2 21 301 1.2E-31 T 23-04-2016 CYCME_RS09535 da1028f46b427741f70e36b715c85e16 304 Gene3D G3DSA:3.30.470.20 175 273 2.3E-18 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS09535 da1028f46b427741f70e36b715c85e16 304 Pfam PF08443 RimK-like ATP-grasp domain 98 290 2.3E-20 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.1E-14 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 1.1E-14 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 1.1E-14 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.1E-14 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.1E-14 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 SUPERFAMILY SSF51905 1 321 1.68E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 459 9.1E-31 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 Gene3D G3DSA:3.50.50.60 4 143 1.7E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 Gene3D G3DSA:3.50.50.60 272 337 1.7E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 328 9.8E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PANTHER PTHR22912:SF93 4 122 3.1E-228 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PANTHER PTHR22912:SF93 138 463 3.1E-228 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PIRSF PIRSF000350 1 466 8.3E-69 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 Gene3D G3DSA:3.30.390.30 346 462 3.6E-33 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 Gene3D G3DSA:3.50.50.60 144 271 1.2E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 SUPERFAMILY SSF55424 347 465 2.06E-30 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 4.2E-48 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PANTHER PTHR22912 4 122 3.1E-228 T 23-04-2016 CYCME_RS07255 855fa77b6686c62d629c95d1d21d1cc6 470 PANTHER PTHR22912 138 463 3.1E-228 T 23-04-2016 CYCME_RS02455 f3b42bd4868224c3b2937b4f2e968e85 360 Gene3D G3DSA:3.60.10.10 91 357 2.4E-19 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS02455 f3b42bd4868224c3b2937b4f2e968e85 360 PANTHER PTHR14859:SF0 98 360 8.2E-22 T 23-04-2016 CYCME_RS02455 f3b42bd4868224c3b2937b4f2e968e85 360 SUPERFAMILY SSF56219 299 360 5.1E-30 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS02455 f3b42bd4868224c3b2937b4f2e968e85 360 SUPERFAMILY SSF56219 41 268 5.1E-30 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS02455 f3b42bd4868224c3b2937b4f2e968e85 360 PANTHER PTHR14859 98 360 8.2E-22 T 23-04-2016 IPR027317 PGAP2-interacting protein CYCME_RS02455 f3b42bd4868224c3b2937b4f2e968e85 360 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 89 350 3.4E-22 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CYCME_RS12810 5571942200a71df3715ed4c6ac3c7b70 210 PANTHER PTHR11911 72 203 9.6E-25 T 23-04-2016 CYCME_RS12810 5571942200a71df3715ed4c6ac3c7b70 210 SMART SM00116 81 129 7.9E-10 T 23-04-2016 IPR000644 CBS domain CYCME_RS12810 5571942200a71df3715ed4c6ac3c7b70 210 SMART SM00116 154 201 4.5E-12 T 23-04-2016 IPR000644 CBS domain CYCME_RS12810 5571942200a71df3715ed4c6ac3c7b70 210 SUPERFAMILY SSF54631 73 203 2.75E-31 T 23-04-2016 CYCME_RS12810 5571942200a71df3715ed4c6ac3c7b70 210 Gene3D G3DSA:3.10.580.10 72 202 9.2E-31 T 23-04-2016 CYCME_RS12810 5571942200a71df3715ed4c6ac3c7b70 210 Pfam PF00571 CBS domain 147 201 3.1E-12 T 23-04-2016 IPR000644 CBS domain CYCME_RS12810 5571942200a71df3715ed4c6ac3c7b70 210 Pfam PF00571 CBS domain 75 129 3.8E-13 T 23-04-2016 IPR000644 CBS domain CYCME_RS05225 44c9bca84ad9178c249fe1e970e29f13 135 SUPERFAMILY SSF160214 40 133 9.42E-21 T 23-04-2016 IPR005186 FlaG protein CYCME_RS05225 44c9bca84ad9178c249fe1e970e29f13 135 Pfam PF03646 FlaG protein 29 133 3.0E-24 T 23-04-2016 IPR005186 FlaG protein CYCME_RS05225 44c9bca84ad9178c249fe1e970e29f13 135 Gene3D G3DSA:3.30.160.170 41 117 6.8E-21 T 23-04-2016 IPR005186 FlaG protein CYCME_RS05225 44c9bca84ad9178c249fe1e970e29f13 135 PANTHER PTHR37166:SF1 56 135 2.4E-14 T 23-04-2016 CYCME_RS05225 44c9bca84ad9178c249fe1e970e29f13 135 PANTHER PTHR37166 56 135 2.4E-14 T 23-04-2016 CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PANTHER PTHR24322 21 150 1.0E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PANTHER PTHR24322 171 203 1.0E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 SUPERFAMILY SSF51735 12 272 1.76E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 270 1.0E-62 T 23-04-2016 CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 Gene3D G3DSA:3.40.50.720 10 271 4.2E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 8.5E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 8.5E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 8.5E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 8.5E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 233 253 8.5E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 8.5E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 2.4E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 2.4E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS01250 83494861eeca9d1009bda8008d3d3226 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 2.4E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS10665 cebaf1c36ad876f0d873ef7c31e2417c 137 PANTHER PTHR33202:SF3 6 132 2.9E-22 T 23-04-2016 CYCME_RS10665 cebaf1c36ad876f0d873ef7c31e2417c 137 Gene3D G3DSA:1.10.10.10 9 88 8.1E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS10665 cebaf1c36ad876f0d873ef7c31e2417c 137 PANTHER PTHR33202 6 132 2.9E-22 T 23-04-2016 CYCME_RS10665 cebaf1c36ad876f0d873ef7c31e2417c 137 SUPERFAMILY SSF46785 12 132 5.16E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS10665 cebaf1c36ad876f0d873ef7c31e2417c 137 Pfam PF01475 Ferric uptake regulator family 18 115 1.3E-20 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CYCME_RS01340 516f149fd79d0a0655f9a1296d402316 283 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 196 267 1.2E-11 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CYCME_RS01340 516f149fd79d0a0655f9a1296d402316 283 SUPERFAMILY SSF74653 178 275 1.57E-14 T 23-04-2016 CYCME_RS01340 516f149fd79d0a0655f9a1296d402316 283 Gene3D G3DSA:3.30.1150.10 177 276 1.2E-17 T 23-04-2016 CYCME_RS01340 516f149fd79d0a0655f9a1296d402316 283 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 198 263 7.1E-10 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 2.7E-32 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 320 8.9E-134 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 PANTHER PTHR18919 27 320 2.2E-127 T 23-04-2016 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 PANTHER PTHR18919:SF109 27 320 2.2E-127 T 23-04-2016 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 231 319 1.7E-36 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 SUPERFAMILY SSF53901 4 319 1.72E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 320 71.279 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 Gene3D G3DSA:3.40.47.10 3 161 1.8E-67 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05375 6d9761d2a2a237cb73a4e578743c7565 320 Gene3D G3DSA:3.40.47.10 162 319 2.4E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 PANTHER PTHR36117:SF1 1 502 6.1E-292 T 23-04-2016 CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 2 265 5.3E-94 T 23-04-2016 IPR024674 HpaB/PvcC/4-BUDH N-terminal CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 SUPERFAMILY SSF47203 257 474 7.11E-47 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 PIRSF PIRSF500125 1 504 5.6E-255 T 23-04-2016 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 SUPERFAMILY SSF56645 1 267 4.89E-81 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 274 475 5.6E-66 T 23-04-2016 IPR024719 HpaB/PvcC/4-BUDH C-terminal CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 PIRSF PIRSF000331 1 487 6.7E-198 T 23-04-2016 IPR004925 HpaB/PvcC/4-BUDH CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 Gene3D G3DSA:1.20.140.10 259 464 1.1E-34 T 23-04-2016 CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 Gene3D G3DSA:2.40.110.10 139 258 8.1E-47 T 23-04-2016 CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 Gene3D G3DSA:1.10.3140.10 1 137 3.8E-53 T 23-04-2016 CYCME_RS10300 0cfb185a5f6e937730adc1b6425f6a4f 505 PANTHER PTHR36117 1 502 6.1E-292 T 23-04-2016 CYCME_RS05955 388039f8155e198ec8c5cd1c1a9f3861 341 PANTHER PTHR13078 3 295 4.0E-57 T 23-04-2016 CYCME_RS05955 388039f8155e198ec8c5cd1c1a9f3861 341 PANTHER PTHR13078:SF49 3 295 4.0E-57 T 23-04-2016 CYCME_RS05955 388039f8155e198ec8c5cd1c1a9f3861 341 SUPERFAMILY SSF54637 6 157 2.75E-30 T 23-04-2016 IPR029069 HotDog domain CYCME_RS05955 388039f8155e198ec8c5cd1c1a9f3861 341 Gene3D G3DSA:3.10.129.10 198 320 5.7E-12 T 23-04-2016 IPR029069 HotDog domain CYCME_RS05955 388039f8155e198ec8c5cd1c1a9f3861 341 Gene3D G3DSA:3.10.129.10 7 156 6.7E-21 T 23-04-2016 IPR029069 HotDog domain CYCME_RS05955 388039f8155e198ec8c5cd1c1a9f3861 341 SUPERFAMILY SSF54637 197 320 5.7E-19 T 23-04-2016 IPR029069 HotDog domain CYCME_RS04050 3091217ed5c9d3950d675cf24fde467b 421 Gene3D G3DSA:3.65.10.10 218 419 3.8E-57 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CYCME_RS04050 3091217ed5c9d3950d675cf24fde467b 421 SUPERFAMILY SSF55205 1 419 4.74E-142 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CYCME_RS04050 3091217ed5c9d3950d675cf24fde467b 421 Gene3D G3DSA:3.65.10.10 21 217 2.0E-66 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CYCME_RS04050 3091217ed5c9d3950d675cf24fde467b 421 PANTHER PTHR21090 1 420 4.1E-196 T 23-04-2016 CYCME_RS04050 3091217ed5c9d3950d675cf24fde467b 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 46.824 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS04050 3091217ed5c9d3950d675cf24fde467b 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 1.9E-114 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CYCME_RS04050 3091217ed5c9d3950d675cf24fde467b 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 4.4E-179 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CYCME_RS06365 875a260d8e9dae729dbd8e7ee4f1eeb4 151 SUPERFAMILY SSF81324 21 131 3.27E-10 T 23-04-2016 CYCME_RS06365 875a260d8e9dae729dbd8e7ee4f1eeb4 151 Pfam PF07885 Ion channel 80 129 2.0E-7 T 23-04-2016 IPR013099 Potassium channel domain CYCME_RS06365 875a260d8e9dae729dbd8e7ee4f1eeb4 151 Gene3D G3DSA:1.10.287.70 42 130 1.3E-6 T 23-04-2016 CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 PANTHER PTHR21666:SF203 40 509 1.7E-139 T 23-04-2016 CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 SMART SM00257 416 460 1.7E-13 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 SMART SM00257 342 385 7.9E-10 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 SMART SM00257 483 526 9.2E-12 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 SUPERFAMILY SSF54106 340 385 3.92E-11 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 131 159 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 Gene3D G3DSA:3.10.350.10 341 386 2.9E-16 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 SUPERFAMILY SSF54106 416 460 1.28E-11 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 Pfam PF01476 LysM domain 484 525 1.1E-11 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 Pfam PF01476 LysM domain 343 385 5.5E-10 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 Pfam PF01476 LysM domain 417 459 2.0E-11 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 Pfam PF01464 Transglycosylase SLT domain 123 222 2.0E-21 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 Gene3D G3DSA:1.10.530.10 107 268 1.4E-42 T 23-04-2016 CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 SUPERFAMILY SSF54106 482 525 1.7E-11 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 PANTHER PTHR21666 40 509 1.7E-139 T 23-04-2016 CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 Gene3D G3DSA:3.10.350.10 481 525 1.9E-17 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 Gene3D G3DSA:3.10.350.10 416 460 8.3E-17 T 23-04-2016 IPR018392 LysM domain CYCME_RS08025 0791ec6d9f4876ee9938329a09c5569e 532 SUPERFAMILY SSF53955 110 263 4.87E-39 T 23-04-2016 IPR023346 Lysozyme-like domain CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 Pfam PF02597 ThiS family 3 66 2.7E-10 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 PANTHER PTHR34266:SF2 67 324 3.0E-150 T 23-04-2016 CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 Hamap MF_00443 Thiazole synthase [thiG]. 70 324 41.987 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 SUPERFAMILY SSF54285 2 65 1.96E-14 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 PANTHER PTHR34266 67 324 3.0E-150 T 23-04-2016 CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 Gene3D G3DSA:3.10.20.30 2 66 1.1E-21 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.2E-19 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 Pfam PF05690 Thiazole biosynthesis protein ThiG 73 319 4.0E-111 T 23-04-2016 CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 SUPERFAMILY SSF110399 69 311 4.71E-88 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 CYCME_RS00405 341f6a0929779d2f38f14d6f3c091af9 324 Gene3D G3DSA:3.20.20.70 79 300 1.3E-54 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 SUPERFAMILY SSF50104 1 63 1.62E-7 T 23-04-2016 IPR008991 Translation protein SH3-like domain CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 Gene3D G3DSA:2.40.50.140 67 130 3.0E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 Gene3D G3DSA:2.30.30.30 1 62 1.5E-9 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 PIRSF PIRSF005901 1 188 2.2E-60 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 9.4E-11 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 PANTHER PTHR30053:SF5 1 188 5.2E-70 T 23-04-2016 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 2.0E-21 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 112 5.6E-15 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 Gene3D G3DSA:2.40.50.140 131 187 3.9E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 PANTHER PTHR30053 1 188 5.2E-70 T 23-04-2016 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 SMART SM01185 69 124 1.9E-14 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 SMART SM00841 132 187 1.4E-26 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 SUPERFAMILY SSF50249 68 129 6.43E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS01430 7467fddf2bd20ae07475f7b6390f1eaa 188 SUPERFAMILY SSF50249 132 187 4.37E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 PANTHER PTHR11082 1 318 3.1E-133 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 PANTHER PTHR11082:SF25 1 318 3.1E-133 T 23-04-2016 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 8.7E-120 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 Gene3D G3DSA:1.10.1200.80 252 321 8.8E-13 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 SUPERFAMILY SSF51395 10 318 1.41E-83 T 23-04-2016 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 Gene3D G3DSA:3.20.20.70 7 244 1.8E-80 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 Pfam PF01207 Dihydrouridine synthase (Dus) 14 312 4.1E-100 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 322 48.781 T 23-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CYCME_RS02920 58475e4b2d27574bc741ac8ba01d33e7 329 PIRSF PIRSF006621 1 329 1.1E-99 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 Gene3D G3DSA:1.10.287.130 214 277 3.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 433 1.4E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 PANTHER PTHR24423:SF474 161 440 7.9E-62 T 23-04-2016 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 PANTHER PTHR24423:SF474 57 129 7.9E-62 T 23-04-2016 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 PANTHER PTHR24423 161 440 7.9E-62 T 23-04-2016 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 PANTHER PTHR24423 57 129 7.9E-62 T 23-04-2016 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 2.0E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 2.0E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 2.0E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 278 2.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 SMART SM00387 328 441 6.0E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 Gene3D G3DSA:3.30.565.10 287 439 4.4E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 SMART SM00388 220 283 2.4E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 Pfam PF08521 Two-component sensor kinase N-terminal 18 143 2.3E-9 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 SUPERFAMILY SSF47384 203 283 2.35E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS08545 82ea159fd824d8916579533a5cf43c5d 441 SUPERFAMILY SSF55874 273 440 8.64E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS02655 dc7193877d49fc41a5887a966acdd7d6 330 Gene3D G3DSA:3.20.20.140 2 327 3.2E-75 T 23-04-2016 CYCME_RS02655 dc7193877d49fc41a5887a966acdd7d6 330 PANTHER PTHR21240 2 326 3.7E-67 T 23-04-2016 CYCME_RS02655 dc7193877d49fc41a5887a966acdd7d6 330 Pfam PF04909 Amidohydrolase 3 325 1.4E-40 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CYCME_RS02655 dc7193877d49fc41a5887a966acdd7d6 330 SUPERFAMILY SSF51556 2 326 2.21E-71 T 23-04-2016 IPR032466 Metal-dependent hydrolase CYCME_RS02655 dc7193877d49fc41a5887a966acdd7d6 330 PANTHER PTHR21240:SF3 2 326 3.7E-67 T 23-04-2016 IPR032465 Amino-carboxymuconate-semialdehyde decarboxylase GO:0001760|GO:0006568|GO:1904984 KEGG: 00380+4.1.1.45|MetaCyc: PWY-5647|MetaCyc: PWY-5652|MetaCyc: PWY-5654|UniPathway: UPA00270 CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 PANTHER PTHR11203:SF11 1 463 5.6E-118 T 23-04-2016 CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 Gene3D G3DSA:3.60.15.10 2 93 7.7E-52 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 Gene3D G3DSA:3.60.15.10 132 264 7.7E-52 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 SMART SM00849 13 244 1.4E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 452 4.3E-15 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 PANTHER PTHR11203 1 463 5.6E-118 T 23-04-2016 CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 SUPERFAMILY SSF56281 2 463 1.78E-126 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 Pfam PF00753 Metallo-beta-lactamase superfamily 12 202 6.4E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 SMART SM01027 256 382 4.5E-56 T 23-04-2016 IPR022712 Beta-Casp domain CYCME_RS00535 dc91f0ba6231727f186554a1cc7e69ac 463 Pfam PF10996 Beta-Casp domain 256 382 7.7E-27 T 23-04-2016 IPR022712 Beta-Casp domain CYCME_RS12170 39695a21c396bf2f83a46876037b349d 458 PIRSF PIRSF006066 4 458 1.3E-68 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 CYCME_RS12170 39695a21c396bf2f83a46876037b349d 458 PANTHER PTHR33362:SF7 5 170 8.3E-179 T 23-04-2016 CYCME_RS12170 39695a21c396bf2f83a46876037b349d 458 PANTHER PTHR33362:SF7 191 457 8.3E-179 T 23-04-2016 CYCME_RS12170 39695a21c396bf2f83a46876037b349d 458 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 446 6.3E-92 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CYCME_RS12170 39695a21c396bf2f83a46876037b349d 458 PANTHER PTHR33362 5 170 8.3E-179 T 23-04-2016 CYCME_RS12170 39695a21c396bf2f83a46876037b349d 458 PANTHER PTHR33362 191 457 8.3E-179 T 23-04-2016 CYCME_RS12170 39695a21c396bf2f83a46876037b349d 458 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 452 2.9E-100 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 Pfam PF01588 Putative tRNA binding domain 582 674 1.6E-23 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 534 5.3E-178 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 Gene3D G3DSA:2.40.50.140 569 677 4.2E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 SUPERFAMILY SSF47323 389 547 1.5E-36 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 SUPERFAMILY SSF52374 7 141 6.37E-101 T 23-04-2016 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 SUPERFAMILY SSF52374 176 386 6.37E-101 T 23-04-2016 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 39.655 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 PANTHER PTHR11946 6 632 2.6E-225 T 23-04-2016 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 7.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 7.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 7.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 7.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 7.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 7.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 Gene3D G3DSA:3.40.50.620 183 378 1.8E-90 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 Gene3D G3DSA:3.40.50.620 7 144 1.8E-90 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 555 677 2.9E-44 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 SUPERFAMILY SSF57770 142 176 4.19E-12 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 Pfam PF09334 tRNA synthetases class I (M) 8 395 1.2E-157 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 PANTHER PTHR11946:SF86 6 632 2.6E-225 T 23-04-2016 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 Gene3D G3DSA:2.20.28.20 145 176 1.3E-18 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 SUPERFAMILY SSF50249 571 676 3.43E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS00825 5934fd5998f7003be82f5c44f3c94523 677 Gene3D G3DSA:1.10.730.10 379 534 2.1E-36 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 SUPERFAMILY SSF53901 106 226 3.91E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 Pfam PF00108 Thiolase, N-terminal domain 1 98 1.1E-35 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 Gene3D G3DSA:3.40.47.10 34 111 2.1E-20 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 1 226 5.6E-93 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 SUPERFAMILY SSF53901 2 104 7.09E-29 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 PANTHER PTHR18919 1 228 1.2E-107 T 23-04-2016 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 Gene3D G3DSA:3.40.47.10 112 226 3.8E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 Gene3D G3DSA:3.40.47.10 2 33 3.8E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 ProSitePatterns PS00737 Thiolases signature 2. 174 190 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CYCME_RS09220 a86d60d8e3237ecbe8ac888d9ed30dec 228 Pfam PF02803 Thiolase, C-terminal domain 105 226 1.9E-47 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CYCME_RS02335 49b7ae9371829255415bbd114617cda3 72 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 10 71 4.8E-18 T 23-04-2016 IPR012662 Conserved hypothetical protein CHP02449 CYCME_RS02335 49b7ae9371829255415bbd114617cda3 72 Gene3D G3DSA:1.20.58.60 5 63 1.3E-4 T 23-04-2016 CYCME_RS10770 1762c544f00d666fd6c916626d233308 310 Pfam PF01545 Cation efflux family 10 216 3.9E-36 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS10770 1762c544f00d666fd6c916626d233308 310 SUPERFAMILY SSF160240 220 297 1.44E-10 T 23-04-2016 CYCME_RS10770 1762c544f00d666fd6c916626d233308 310 SUPERFAMILY SSF161111 5 218 5.62E-43 T 23-04-2016 CYCME_RS10770 1762c544f00d666fd6c916626d233308 310 PANTHER PTHR13414 1 285 3.1E-94 T 23-04-2016 CYCME_RS10770 1762c544f00d666fd6c916626d233308 310 Gene3D G3DSA:3.30.70.1350 219 297 1.8E-8 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CYCME_RS10770 1762c544f00d666fd6c916626d233308 310 Pfam PF16916 Dimerisation domain of Zinc Transporter 223 295 9.6E-7 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CYCME_RS10770 1762c544f00d666fd6c916626d233308 310 Gene3D G3DSA:1.20.1510.10 6 216 2.7E-38 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CYCME_RS10770 1762c544f00d666fd6c916626d233308 310 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 298 1.5E-46 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 3.47E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 3.47E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 3.47E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 3.47E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 3.47E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 PANTHER PTHR11778 1 424 4.8E-202 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 40.676 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 SUPERFAMILY SSF55681 116 421 4.75E-98 T 23-04-2016 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 PIRSF PIRSF001529 1 425 1.0E-179 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 1.6E-28 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 219 400 6.4E-32 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 Gene3D G3DSA:1.10.287.40 1 104 3.1E-27 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 Gene3D G3DSA:3.30.930.10 105 419 1.1E-137 T 23-04-2016 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 6.3E-168 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CYCME_RS05760 9343919e097fe6af37307a6888cda7e7 425 SUPERFAMILY SSF46589 1 112 1.31E-28 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CYCME_RS10105 8fad9803fef88b4271505bb68103e6c0 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 29.401 T 23-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CYCME_RS10105 8fad9803fef88b4271505bb68103e6c0 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 1.3E-59 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CYCME_RS10105 8fad9803fef88b4271505bb68103e6c0 202 PIRSF PIRSF006102 1 202 1.6E-62 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CYCME_RS10105 8fad9803fef88b4271505bb68103e6c0 202 PANTHER PTHR30335 2 202 9.3E-130 T 23-04-2016 CYCME_RS10105 8fad9803fef88b4271505bb68103e6c0 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 201 4.0E-101 T 23-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CYCME_RS10105 8fad9803fef88b4271505bb68103e6c0 202 PANTHER PTHR30335:SF1 2 202 9.3E-130 T 23-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 PANTHER PTHR30093:SF4 1 63 2.8E-17 T 23-04-2016 CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 1.4E-9 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 1.4E-9 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 Gene3D G3DSA:3.30.700.10 7 126 2.7E-12 T 23-04-2016 CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 PANTHER PTHR30093 1 63 2.8E-17 T 23-04-2016 CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 3.9E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 129 1.9E-16 T 23-04-2016 IPR031982 Type IV minor pilin ComP CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 SUPERFAMILY SSF54523 7 137 4.79E-21 T 23-04-2016 CYCME_RS00340 a08eb4f853bd809793c004284af36605 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.6E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS08220 76e60f612d6412958fc73cb26a0961da 804 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 97 801 1.5E-273 T 23-04-2016 IPR010706 Fatty acid cis-trans isomerase CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 PIRSF PIRSF003180 1 386 7.1E-109 T 23-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 Gene3D G3DSA:3.20.20.450 30 179 1.2E-11 T 23-04-2016 IPR001633 EAL domain CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 PANTHER PTHR33525:SF4 3 354 4.7E-94 T 23-04-2016 CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 SUPERFAMILY SSF141868 3 191 2.48E-28 T 23-04-2016 IPR001633 EAL domain CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 Pfam PF08668 HDOD domain 203 321 5.7E-20 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 SMART SM00052 2 193 1.7E-5 T 23-04-2016 IPR001633 EAL domain CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 Pfam PF00563 EAL domain 41 188 8.5E-12 T 23-04-2016 IPR001633 EAL domain CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 Gene3D G3DSA:1.10.3150.10 180 347 4.5E-38 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 PANTHER PTHR33525 3 354 4.7E-94 T 23-04-2016 CYCME_RS01645 3741e15cd6e8f4ab192f65717875816d 390 SUPERFAMILY SSF109604 179 354 4.08E-38 T 23-04-2016 CYCME_RS03155 36cfc61ab5c1f8bf826b47bf7d195f96 220 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 4.5E-89 T 23-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CYCME_RS03155 36cfc61ab5c1f8bf826b47bf7d195f96 220 Pfam PF00005 ABC transporter 18 165 2.8E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS03155 36cfc61ab5c1f8bf826b47bf7d195f96 220 PANTHER PTHR24220:SF470 3 216 8.9E-116 T 23-04-2016 CYCME_RS03155 36cfc61ab5c1f8bf826b47bf7d195f96 220 SMART SM00382 27 214 2.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS03155 36cfc61ab5c1f8bf826b47bf7d195f96 220 Gene3D G3DSA:3.40.50.300 1 217 1.2E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03155 36cfc61ab5c1f8bf826b47bf7d195f96 220 PANTHER PTHR24220 3 216 8.9E-116 T 23-04-2016 CYCME_RS03155 36cfc61ab5c1f8bf826b47bf7d195f96 220 SUPERFAMILY SSF52540 1 217 1.19E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03155 36cfc61ab5c1f8bf826b47bf7d195f96 220 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 Gene3D G3DSA:3.20.20.210 3 389 7.4E-149 T 23-04-2016 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 SUPERFAMILY SSF51726 4 394 3.14E-114 T 23-04-2016 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 Gene3D G3DSA:3.20.20.210 392 759 2.4E-132 T 23-04-2016 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 PIRSF PIRSF000382 1 763 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 PANTHER PTHR30519 1 763 0.0 T 23-04-2016 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 SUPERFAMILY SSF51726 396 757 1.7E-116 T 23-04-2016 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 8.9E-158 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 314 1.1E-126 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 757 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 PANTHER PTHR30519:SF0 1 763 0.0 T 23-04-2016 CYCME_RS08195 e507c197daca7cc8430919b6ccb95dd3 763 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 37.123 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CYCME_RS04260 628a0479c2688195f03f09ba8a588259 310 Gene3D G3DSA:3.40.800.20 2 308 1.9E-98 T 23-04-2016 IPR023801 Histone deacetylase domain CYCME_RS04260 628a0479c2688195f03f09ba8a588259 310 PRINTS PR01270 Histone deacetylase superfamily signature 236 246 4.9E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily CYCME_RS04260 628a0479c2688195f03f09ba8a588259 310 PRINTS PR01270 Histone deacetylase superfamily signature 124 147 4.9E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily CYCME_RS04260 628a0479c2688195f03f09ba8a588259 310 PRINTS PR01270 Histone deacetylase superfamily signature 158 173 4.9E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily CYCME_RS04260 628a0479c2688195f03f09ba8a588259 310 PANTHER PTHR10625:SF104 1 307 5.9E-92 T 23-04-2016 CYCME_RS04260 628a0479c2688195f03f09ba8a588259 310 SUPERFAMILY SSF52768 1 308 1.77E-97 T 23-04-2016 CYCME_RS04260 628a0479c2688195f03f09ba8a588259 310 Pfam PF00850 Histone deacetylase domain 20 306 7.8E-78 T 23-04-2016 IPR023801 Histone deacetylase domain CYCME_RS04260 628a0479c2688195f03f09ba8a588259 310 PANTHER PTHR10625 1 307 5.9E-92 T 23-04-2016 IPR000286 Histone deacetylase superfamily CYCME_RS10905 2716afe08ff570fefc5ebbcd49c42c08 105 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 105 6.3E-36 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE CYCME_RS10905 2716afe08ff570fefc5ebbcd49c42c08 105 PANTHER PTHR37010 4 105 2.5E-33 T 23-04-2016 CYCME_RS10905 2716afe08ff570fefc5ebbcd49c42c08 105 PIRSF PIRSF006223 2 105 8.5E-33 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE CYCME_RS10905 2716afe08ff570fefc5ebbcd49c42c08 105 PANTHER PTHR37010:SF1 4 105 2.5E-33 T 23-04-2016 CYCME_RS10905 2716afe08ff570fefc5ebbcd49c42c08 105 Pfam PF04358 DsrC like protein 4 105 1.5E-34 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE CYCME_RS10905 2716afe08ff570fefc5ebbcd49c42c08 105 SUPERFAMILY SSF69721 4 105 3.27E-30 T 23-04-2016 IPR025526 DsrC-like domain CYCME_RS10905 2716afe08ff570fefc5ebbcd49c42c08 105 Gene3D G3DSA:1.10.10.370 35 105 1.3E-25 T 23-04-2016 CYCME_RS10905 2716afe08ff570fefc5ebbcd49c42c08 105 Gene3D G3DSA:3.30.1420.10 5 32 2.0E-7 T 23-04-2016 CYCME_RS10130 83303222a9dae8e20b35170507b30f60 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 1.1E-13 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS10130 83303222a9dae8e20b35170507b30f60 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 1.1E-13 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS10130 83303222a9dae8e20b35170507b30f60 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 140 164 1.1E-13 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS10130 83303222a9dae8e20b35170507b30f60 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 1.1E-13 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS10130 83303222a9dae8e20b35170507b30f60 257 PANTHER PTHR30413:SF2 4 257 1.9E-133 T 23-04-2016 CYCME_RS10130 83303222a9dae8e20b35170507b30f60 257 Pfam PF01061 ABC-2 type transporter 11 219 1.4E-38 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 CYCME_RS10130 83303222a9dae8e20b35170507b30f60 257 PIRSF PIRSF006648 5 254 9.2E-25 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS10130 83303222a9dae8e20b35170507b30f60 257 PANTHER PTHR30413 4 257 1.9E-133 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CYCME_RS01520 6961c641bf769af9ace8e40a6e86f906 220 Pfam PF00117 Glutamine amidotransferase class-I 6 208 4.9E-19 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CYCME_RS01520 6961c641bf769af9ace8e40a6e86f906 220 Gene3D G3DSA:3.40.50.880 2 212 1.6E-75 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS01520 6961c641bf769af9ace8e40a6e86f906 220 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 209 1.6E-66 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CYCME_RS01520 6961c641bf769af9ace8e40a6e86f906 220 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 210 34.642 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CYCME_RS01520 6961c641bf769af9ace8e40a6e86f906 220 PIRSF PIRSF000495 2 213 1.6E-69 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CYCME_RS01520 6961c641bf769af9ace8e40a6e86f906 220 SUPERFAMILY SSF52317 3 210 4.73E-53 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS01520 6961c641bf769af9ace8e40a6e86f906 220 PANTHER PTHR21235 4 210 6.6E-78 T 23-04-2016 CYCME_RS01520 6961c641bf769af9ace8e40a6e86f906 220 PANTHER PTHR21235:SF1 4 210 6.6E-78 T 23-04-2016 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 Pfam PF01165 Ribosomal protein S21 3 56 2.7E-22 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 42 6.0E-8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.145 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 58 3.3E-24 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.7E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.7E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.7E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.7E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CYCME_RS00500 7ff3775c3abd51741c3ffaf016ec240b 75 PANTHER PTHR21109 1 74 1.4E-23 T 23-04-2016 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 Gene3D G3DSA:3.40.630.40 151 248 1.5E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 Gene3D G3DSA:3.40.630.40 296 371 1.5E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 Pfam PF11741 AMIN domain 26 125 3.7E-19 T 23-04-2016 IPR021731 AMIN domain CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 SMART SM00646 213 368 2.5E-64 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 153 368 1.0E-49 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 PANTHER PTHR30404:SF1 1 400 3.0E-97 T 23-04-2016 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 SUPERFAMILY SSF54106 388 431 7.98E-11 T 23-04-2016 IPR018392 LysM domain CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 SUPERFAMILY SSF53187 295 371 1.51E-52 T 23-04-2016 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 SUPERFAMILY SSF53187 151 247 1.51E-52 T 23-04-2016 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 PANTHER PTHR30404 1 400 3.0E-97 T 23-04-2016 CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 Pfam PF01476 LysM domain 389 431 3.3E-12 T 23-04-2016 IPR018392 LysM domain CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 SMART SM00257 388 431 5.0E-16 T 23-04-2016 IPR018392 LysM domain CYCME_RS04445 66ac39be4ba98d5ea33e8de817a7a996 432 Gene3D G3DSA:3.10.350.10 387 431 7.2E-18 T 23-04-2016 IPR018392 LysM domain CYCME_RS09970 925c1ada1385bab0244051e327877a12 134 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 110 6.0E-27 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CYCME_RS09970 925c1ada1385bab0244051e327877a12 134 SUPERFAMILY SSF55620 2 131 7.23E-36 T 23-04-2016 CYCME_RS09970 925c1ada1385bab0244051e327877a12 134 PANTHER PTHR12589 1 131 5.5E-33 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CYCME_RS09970 925c1ada1385bab0244051e327877a12 134 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 132 1.1E-35 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CYCME_RS09970 925c1ada1385bab0244051e327877a12 134 Gene3D G3DSA:3.30.479.10 2 132 2.2E-36 T 23-04-2016 CYCME_RS02825 89d350e8d16c2c7050a31fd66068f78c 127 SUPERFAMILY SSF110069 7 127 6.15E-48 T 23-04-2016 IPR007474 ApaG domain CYCME_RS02825 89d350e8d16c2c7050a31fd66068f78c 127 PANTHER PTHR14289 9 124 2.2E-48 T 23-04-2016 CYCME_RS02825 89d350e8d16c2c7050a31fd66068f78c 127 Gene3D G3DSA:2.60.40.1470 6 127 2.2E-47 T 23-04-2016 IPR007474 ApaG domain CYCME_RS02825 89d350e8d16c2c7050a31fd66068f78c 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 32.498 T 23-04-2016 IPR023065 Uncharacterised protein family ApaG CYCME_RS02825 89d350e8d16c2c7050a31fd66068f78c 127 Pfam PF04379 Protein of unknown function (DUF525) 21 104 6.3E-36 T 23-04-2016 IPR007474 ApaG domain CYCME_RS03950 aa032ed6e8b6c3ed721dfb1b6a4c2fca 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 1.4E-53 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CYCME_RS03950 aa032ed6e8b6c3ed721dfb1b6a4c2fca 195 PIRSF PIRSF006305 1 191 2.7E-56 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CYCME_RS03950 aa032ed6e8b6c3ed721dfb1b6a4c2fca 195 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.715 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CYCME_RS03950 aa032ed6e8b6c3ed721dfb1b6a4c2fca 195 SUPERFAMILY SSF52972 2 184 2.68E-60 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CYCME_RS03950 aa032ed6e8b6c3ed721dfb1b6a4c2fca 195 Gene3D G3DSA:3.90.950.10 2 187 4.4E-67 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CYCME_RS03950 aa032ed6e8b6c3ed721dfb1b6a4c2fca 195 Pfam PF02545 Maf-like protein 3 184 1.0E-56 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CYCME_RS05500 ba772dcebeedd667e63fb82157146dc3 445 Pfam PF01554 MatE 242 403 4.5E-30 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CYCME_RS05500 ba772dcebeedd667e63fb82157146dc3 445 Pfam PF01554 MatE 25 185 4.9E-27 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CYCME_RS05500 ba772dcebeedd667e63fb82157146dc3 445 PIRSF PIRSF006603 3 445 9.8E-89 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CYCME_RS05500 ba772dcebeedd667e63fb82157146dc3 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 405 4.6E-60 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CYCME_RS05500 ba772dcebeedd667e63fb82157146dc3 445 PANTHER PTHR11206:SF132 8 436 1.3E-81 T 23-04-2016 CYCME_RS05500 ba772dcebeedd667e63fb82157146dc3 445 PANTHER PTHR11206 8 436 1.3E-81 T 23-04-2016 CYCME_RS10885 82807c4cbaace66fb6b46655f164edb7 109 PANTHER PTHR33751 3 102 2.2E-20 T 23-04-2016 CYCME_RS10885 82807c4cbaace66fb6b46655f164edb7 109 PANTHER PTHR33751:SF3 3 102 2.2E-20 T 23-04-2016 CYCME_RS10885 82807c4cbaace66fb6b46655f164edb7 109 SUPERFAMILY SSF46626 20 101 1.26E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS10885 82807c4cbaace66fb6b46655f164edb7 109 Gene3D G3DSA:1.10.760.10 28 102 4.9E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS10885 82807c4cbaace66fb6b46655f164edb7 109 Pfam PF00034 Cytochrome c 28 101 1.4E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS02115 f35d93bb5ec9558d5d7cbd269809f9a5 130 SUPERFAMILY SSF54593 7 128 2.28E-30 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS02115 f35d93bb5ec9558d5d7cbd269809f9a5 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 121 5.0E-17 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS02115 f35d93bb5ec9558d5d7cbd269809f9a5 130 PANTHER PTHR36113 9 129 5.8E-15 T 23-04-2016 CYCME_RS02115 f35d93bb5ec9558d5d7cbd269809f9a5 130 Gene3D G3DSA:3.10.180.10 6 127 6.4E-30 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS02115 f35d93bb5ec9558d5d7cbd269809f9a5 130 ProSitePatterns PS00934 Glyoxalase I signature 1. 12 33 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 244 5.0E-78 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 SUPERFAMILY SSF55315 3 76 3.41E-15 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 Gene3D G3DSA:3.40.1280.10 92 246 3.3E-55 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 PANTHER PTHR12029 9 244 4.3E-74 T 23-04-2016 CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 80 1.7E-16 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 Pfam PF00588 SpoU rRNA Methylase family 99 239 1.3E-40 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 Gene3D G3DSA:3.30.1330.30 4 77 8.9E-18 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 246 38.276 T 23-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 SUPERFAMILY SSF75217 95 246 7.19E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CYCME_RS09175 8d7ec0361d764606ea1e82539b1eb3a0 251 SMART SM00967 6 82 9.9E-14 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CYCME_RS03695 d84fe39bbdcb6c3823b617421c603527 65 SUPERFAMILY SSF46561 1 61 2.35E-22 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03695 d84fe39bbdcb6c3823b617421c603527 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 9.6E-23 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03695 d84fe39bbdcb6c3823b617421c603527 65 PANTHER PTHR10916 1 58 5.2E-26 T 23-04-2016 CYCME_RS03695 d84fe39bbdcb6c3823b617421c603527 65 Gene3D G3DSA:1.10.287.310 1 60 2.7E-27 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03695 d84fe39bbdcb6c3823b617421c603527 65 PANTHER PTHR10916:SF0 1 58 5.2E-26 T 23-04-2016 CYCME_RS03695 d84fe39bbdcb6c3823b617421c603527 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.055 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03695 d84fe39bbdcb6c3823b617421c603527 65 Pfam PF00831 Ribosomal L29 protein 4 58 1.4E-24 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 SUPERFAMILY SSF51735 1 154 3.15E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 Gene3D G3DSA:3.30.360.10 143 267 5.3E-60 T 23-04-2016 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 304 135.708 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 130 267 4.1E-60 T 23-04-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 PIRSF PIRSF015689 1 297 2.2E-132 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 Gene3D G3DSA:3.40.50.720 1 142 2.5E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 291 2.3E-137 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 SMART SM00859 5 120 1.1E-4 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 117 1.0E-10 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 PANTHER PTHR41706 1 299 1.5E-118 T 23-04-2016 CYCME_RS04765 aab562679377906ece18cb73a01a3394 304 SUPERFAMILY SSF55347 130 268 1.11E-55 T 23-04-2016 CYCME_RS08405 54efd75926655fc2fbc0ba82c63b0d79 252 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 3 251 41.247 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CYCME_RS08405 54efd75926655fc2fbc0ba82c63b0d79 252 PANTHER PTHR21485 7 250 1.5E-102 T 23-04-2016 CYCME_RS08405 54efd75926655fc2fbc0ba82c63b0d79 252 SUPERFAMILY SSF53448 5 250 5.63E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS08405 54efd75926655fc2fbc0ba82c63b0d79 252 Pfam PF02348 Cytidylyltransferase 7 224 8.9E-58 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CYCME_RS08405 54efd75926655fc2fbc0ba82c63b0d79 252 PANTHER PTHR21485:SF4 7 250 1.5E-102 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CYCME_RS08405 54efd75926655fc2fbc0ba82c63b0d79 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 244 8.0E-92 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CYCME_RS08405 54efd75926655fc2fbc0ba82c63b0d79 252 Gene3D G3DSA:3.90.550.10 5 251 9.0E-75 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 SUPERFAMILY SSF53597 148 366 1.04E-56 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 Gene3D G3DSA:3.40.430.10 133 369 2.9E-70 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 SUPERFAMILY SSF53927 7 148 1.0E-46 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 PANTHER PTHR11079 5 227 4.4E-67 T 23-04-2016 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 104 1.2E-21 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 PIRSF PIRSF006769 2 369 1.5E-130 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 Pfam PF01872 RibD C-terminal domain 151 361 1.4E-47 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 363 2.2E-119 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 PANTHER PTHR11079:SF10 5 227 4.4E-67 T 23-04-2016 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 366 6.7E-61 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CYCME_RS04275 658eec7f8e68becf92f6caa412893c8f 370 Gene3D G3DSA:3.40.140.10 6 132 5.5E-34 T 23-04-2016 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 Pfam PF03461 TRCF domain 962 1054 5.0E-26 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 1 1062 27.648 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SUPERFAMILY SSF52540 5 301 2.83E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SUPERFAMILY SSF52540 734 942 2.25E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 Pfam PF00270 DEAD/DEAH box helicase 557 717 1.8E-18 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 Gene3D G3DSA:3.40.50.300 738 915 1.2E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 PANTHER PTHR14025:SF21 337 1094 0.0 T 23-04-2016 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SUPERFAMILY SSF52540 323 417 1.26E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 Pfam PF00271 Helicase conserved C-terminal domain 760 861 3.6E-16 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 PANTHER PTHR14025 337 1094 0.0 T 23-04-2016 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 Pfam PF02559 CarD-like/TRCF domain 432 525 2.9E-23 T 23-04-2016 IPR003711 CarD-like/TRCF domain CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SUPERFAMILY SSF143517 946 1097 6.02E-43 T 23-04-2016 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 Gene3D G3DSA:3.40.50.300 543 737 1.6E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 112 1033 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SUPERFAMILY SSF52540 476 736 1.92E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SMART SM01058 431 528 1.2E-42 T 23-04-2016 IPR003711 CarD-like/TRCF domain CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SMART SM00982 960 1060 8.0E-48 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 Gene3D G3DSA:3.30.2060.10 96 174 9.6E-14 T 23-04-2016 CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SUPERFAMILY SSF141259 425 500 3.53E-22 T 23-04-2016 IPR003711 CarD-like/TRCF domain CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SMART SM00487 552 741 2.1E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS08455 a2d282b95df82fdd5d4cc92ee7e55b49 1101 SMART SM00490 778 862 2.0E-15 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS07405 6a15105cf1ad6988eee71e04602eaefb 151 PANTHER PTHR35867 6 151 6.3E-30 T 23-04-2016 CYCME_RS07405 6a15105cf1ad6988eee71e04602eaefb 151 PIRSF PIRSF004923 5 151 2.6E-31 T 23-04-2016 IPR026268 Protein RseC CYCME_RS07405 6a15105cf1ad6988eee71e04602eaefb 151 PANTHER PTHR35867:SF1 6 151 6.3E-30 T 23-04-2016 CYCME_RS07405 6a15105cf1ad6988eee71e04602eaefb 151 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 12 148 3.9E-30 T 23-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 PANTHER PTHR11918 1 454 4.3E-199 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 SUPERFAMILY SSF102114 128 371 5.76E-59 T 23-04-2016 CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 Pfam PF01938 TRAM domain 378 440 2.3E-16 T 23-04-2016 IPR002792 TRAM domain CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 5.3E-185 T 23-04-2016 CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 PANTHER PTHR11918:SF43 1 454 4.3E-199 T 23-04-2016 CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 SMART SM00729 147 367 8.2E-54 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 Pfam PF04055 Radical SAM superfamily 151 325 3.3E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.2E-146 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 Gene3D G3DSA:3.80.30.20 146 379 1.2E-75 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.4E-27 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CYCME_RS03870 67e68aae3604d863bbb0b5879998546a 458 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.052 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 SUPERFAMILY SSF53335 2 272 1.92E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 Gene3D G3DSA:1.10.8.10 2 84 1.6E-24 T 23-04-2016 CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 PANTHER PTHR18895:SF64 22 276 3.2E-92 T 23-04-2016 CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 272 6.4E-88 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 276 39.977 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 Pfam PF13847 Methyltransferase domain 110 241 1.5E-20 T 23-04-2016 IPR025714 Methyltransferase domain CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 PANTHER PTHR18895 22 276 3.2E-92 T 23-04-2016 CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 274 3.5E-82 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CYCME_RS03515 feede9cae202ffdca4f9504c117c0161 277 Gene3D G3DSA:3.40.50.150 86 275 1.1E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS10125 e88ad66d77ceea35aa98f6577a17cce8 447 Pfam PF11973 NQRA C-terminal domain 262 310 1.3E-20 T 23-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 CYCME_RS10125 e88ad66d77ceea35aa98f6577a17cce8 447 PANTHER PTHR37839 1 447 4.0E-192 T 23-04-2016 CYCME_RS10125 e88ad66d77ceea35aa98f6577a17cce8 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 4 256 4.5E-105 T 23-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CYCME_RS10125 e88ad66d77ceea35aa98f6577a17cce8 447 PANTHER PTHR37839:SF1 1 447 4.0E-192 T 23-04-2016 CYCME_RS10125 e88ad66d77ceea35aa98f6577a17cce8 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 5 447 1.7E-169 T 23-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CYCME_RS10125 e88ad66d77ceea35aa98f6577a17cce8 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 3 447 44.868 T 23-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.997 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 SUPERFAMILY SSF50104 2 63 9.03E-20 T 23-04-2016 IPR008991 Translation protein SH3-like domain CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 PIRSF PIRSF005901 2 188 1.0E-66 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 Gene3D G3DSA:2.40.50.140 130 187 4.0E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 SUPERFAMILY SSF50249 69 128 2.48E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 SMART SM00841 131 186 2.2E-32 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 5.5E-24 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 3.6E-78 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 SMART SM01185 69 123 3.8E-26 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.3E-26 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.8E-23 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 SUPERFAMILY SSF50249 130 187 1.71E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 PANTHER PTHR30053 1 188 7.1E-88 T 23-04-2016 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 Gene3D G3DSA:2.30.30.30 1 65 1.4E-28 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CYCME_RS04635 c2fa6176621d837fbdbdb590fd50c2c1 189 Gene3D G3DSA:2.40.50.140 66 129 1.3E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS10915 09c52ac607514a5e2ad35eb738524f4b 125 SUPERFAMILY SSF75169 9 123 4.86E-30 T 23-04-2016 IPR027396 DsrEFH-like CYCME_RS10915 09c52ac607514a5e2ad35eb738524f4b 125 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 11 124 2.3E-31 T 23-04-2016 IPR017462 Sulphur relay, TusC/DsrF CYCME_RS10915 09c52ac607514a5e2ad35eb738524f4b 125 Pfam PF02635 DsrE/DsrF-like family 9 123 1.5E-19 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein CYCME_RS10915 09c52ac607514a5e2ad35eb738524f4b 125 PANTHER PTHR38780 8 125 3.3E-27 T 23-04-2016 CYCME_RS10915 09c52ac607514a5e2ad35eb738524f4b 125 PANTHER PTHR38780:SF1 8 125 3.3E-27 T 23-04-2016 CYCME_RS10915 09c52ac607514a5e2ad35eb738524f4b 125 Gene3D G3DSA:3.40.1260.10 8 124 4.8E-33 T 23-04-2016 IPR027396 DsrEFH-like CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PANTHER PTHR11606:SF1 215 565 0.0 T 23-04-2016 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PANTHER PTHR11606:SF1 674 1098 0.0 T 23-04-2016 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PANTHER PTHR11606:SF1 1123 1367 0.0 T 23-04-2016 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PANTHER PTHR11606:SF1 6 150 0.0 T 23-04-2016 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 SUPERFAMILY SSF53223 755 957 7.19E-24 T 23-04-2016 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 SUPERFAMILY SSF51735 946 1048 2.89E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 SUPERFAMILY SSF51735 1084 1221 2.89E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PIRSF PIRSF036761 1 1608 0.0 T 23-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1601 0.0 T 23-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 Gene3D G3DSA:3.40.50.720 943 1054 2.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 Gene3D G3DSA:3.40.50.720 1109 1180 2.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PANTHER PTHR11606 215 565 0.0 T 23-04-2016 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PANTHER PTHR11606 674 1098 0.0 T 23-04-2016 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PANTHER PTHR11606 1123 1367 0.0 T 23-04-2016 CYCME_RS03840 56696ff51adc3ebc728ad97bc57336ca 1612 PANTHER PTHR11606 6 150 0.0 T 23-04-2016 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 Gene3D G3DSA:3.90.228.20 221 283 2.6E-117 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 Gene3D G3DSA:3.90.228.20 344 532 2.6E-117 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 SUPERFAMILY SSF53795 222 533 9.81E-124 T 23-04-2016 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 258 273 - T 23-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 Gene3D G3DSA:3.40.449.10 17 219 2.6E-85 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 11 531 53.587 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 533 1.9E-263 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 PANTHER PTHR30031 1 534 5.4E-303 T 23-04-2016 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 SUPERFAMILY SSF68923 3 220 3.49E-89 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 PIRSF PIRSF006294 1 533 8.4E-223 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 Pfam PF01293 Phosphoenolpyruvate carboxykinase 17 484 1.7E-207 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CYCME_RS05035 ac0dd6445e266130db134e1a4fd8bffd 534 PANTHER PTHR30031:SF0 1 534 5.4E-303 T 23-04-2016 CYCME_RS05630 58b3446765e93a07e030c6390778ec6d 134 PANTHER PTHR36503 2 129 2.6E-53 T 23-04-2016 CYCME_RS05630 58b3446765e93a07e030c6390778ec6d 134 SUPERFAMILY SSF54593 4 131 1.88E-26 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS05630 58b3446765e93a07e030c6390778ec6d 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 8.1E-10 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS05630 58b3446765e93a07e030c6390778ec6d 134 PANTHER PTHR36503:SF1 2 129 2.6E-53 T 23-04-2016 CYCME_RS05630 58b3446765e93a07e030c6390778ec6d 134 Gene3D G3DSA:3.10.180.10 1 132 4.0E-40 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS00785 843de7f1ff996cff7b96ff90ab5fa80d 273 SMART SM00481 4 68 3.1E-18 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CYCME_RS00785 843de7f1ff996cff7b96ff90ab5fa80d 273 SUPERFAMILY SSF89550 163 256 6.54E-49 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CYCME_RS00785 843de7f1ff996cff7b96ff90ab5fa80d 273 SUPERFAMILY SSF89550 1 81 6.54E-49 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CYCME_RS00785 843de7f1ff996cff7b96ff90ab5fa80d 273 Gene3D G3DSA:3.20.20.140 155 259 7.4E-42 T 23-04-2016 CYCME_RS00785 843de7f1ff996cff7b96ff90ab5fa80d 273 Gene3D G3DSA:3.20.20.140 1 86 7.4E-42 T 23-04-2016 CYCME_RS00785 843de7f1ff996cff7b96ff90ab5fa80d 273 Pfam PF02811 PHP domain 5 106 6.5E-11 T 23-04-2016 IPR004013 PHP domain GO:0003824 CYCME_RS00785 843de7f1ff996cff7b96ff90ab5fa80d 273 PANTHER PTHR30007:SF4 1 257 9.8E-74 T 23-04-2016 CYCME_RS00785 843de7f1ff996cff7b96ff90ab5fa80d 273 PANTHER PTHR30007 1 257 9.8E-74 T 23-04-2016 CYCME_RS05415 8fb69e10c00236490cb72211208031cc 209 Pfam PF02223 Thymidylate kinase 9 198 3.5E-50 T 23-04-2016 CYCME_RS05415 8fb69e10c00236490cb72211208031cc 209 PANTHER PTHR10344 4 206 6.6E-64 T 23-04-2016 CYCME_RS05415 8fb69e10c00236490cb72211208031cc 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 198 1.3E-53 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CYCME_RS05415 8fb69e10c00236490cb72211208031cc 209 Hamap MF_00165 Thymidylate kinase [tmk]. 5 206 30.016 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CYCME_RS05415 8fb69e10c00236490cb72211208031cc 209 SUPERFAMILY SSF52540 1 205 1.01E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05415 8fb69e10c00236490cb72211208031cc 209 Gene3D G3DSA:3.40.50.300 4 206 1.7E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04400 2e3d2958cd30c7be6780f5f0dccff062 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 104 1.7E-33 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CYCME_RS04400 2e3d2958cd30c7be6780f5f0dccff062 108 PIRSF PIRSF004555 1 108 3.6E-37 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CYCME_RS04400 2e3d2958cd30c7be6780f5f0dccff062 108 Gene3D G3DSA:3.30.1310.10 1 108 5.9E-46 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CYCME_RS04400 2e3d2958cd30c7be6780f5f0dccff062 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 97 21.917 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CYCME_RS04400 2e3d2958cd30c7be6780f5f0dccff062 108 PANTHER PTHR33449:SF1 1 108 8.0E-42 T 23-04-2016 CYCME_RS04400 2e3d2958cd30c7be6780f5f0dccff062 108 Pfam PF02575 YbaB/EbfC DNA-binding family 9 98 7.4E-35 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CYCME_RS04400 2e3d2958cd30c7be6780f5f0dccff062 108 SUPERFAMILY SSF82607 9 102 4.97E-33 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CYCME_RS04400 2e3d2958cd30c7be6780f5f0dccff062 108 PANTHER PTHR33449 1 108 8.0E-42 T 23-04-2016 CYCME_RS10985 1bbde013ce8487d51fc5c1c2be1bd0fd 317 Gene3D G3DSA:3.40.50.720 6 207 1.6E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10985 1bbde013ce8487d51fc5c1c2be1bd0fd 317 SUPERFAMILY SSF51735 3 315 4.6E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10985 1bbde013ce8487d51fc5c1c2be1bd0fd 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 228 8.5E-76 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CYCME_RS10985 1bbde013ce8487d51fc5c1c2be1bd0fd 317 PANTHER PTHR10366:SF246 6 315 4.8E-131 T 23-04-2016 CYCME_RS10985 1bbde013ce8487d51fc5c1c2be1bd0fd 317 Gene3D G3DSA:3.90.25.10 294 316 5.6E-12 T 23-04-2016 CYCME_RS10985 1bbde013ce8487d51fc5c1c2be1bd0fd 317 Gene3D G3DSA:3.90.25.10 208 232 5.6E-12 T 23-04-2016 CYCME_RS10985 1bbde013ce8487d51fc5c1c2be1bd0fd 317 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 315 48.918 T 23-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 CYCME_RS10985 1bbde013ce8487d51fc5c1c2be1bd0fd 317 PANTHER PTHR10366 6 315 4.8E-131 T 23-04-2016 CYCME_RS00355 c50ec9267f5fb26e512066bbc283b1b2 360 SUPERFAMILY SSF54523 14 96 2.83E-5 T 23-04-2016 CYCME_RS00355 c50ec9267f5fb26e512066bbc283b1b2 360 Pfam PF16074 Type IV Pilus-assembly protein W 239 357 1.5E-27 T 23-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 CYCME_RS00355 c50ec9267f5fb26e512066bbc283b1b2 360 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 32 7.0E-4 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS01470 c937af7f0cbbfaf913c4cd55bd6357aa 402 SUPERFAMILY SSF56935 37 402 7.33E-18 T 23-04-2016 CYCME_RS01470 c937af7f0cbbfaf913c4cd55bd6357aa 402 Gene3D G3DSA:2.40.160.20 314 402 1.9E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CYCME_RS01470 c937af7f0cbbfaf913c4cd55bd6357aa 402 Gene3D G3DSA:2.40.160.10 226 313 2.2E-5 T 23-04-2016 IPR023614 Porin domain CYCME_RS09855 f6720d4cee6fb07545fd96b3d4a3f1e1 119 Pfam PF02021 Uncharacterised protein family UPF0102 12 100 6.4E-28 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 CYCME_RS09855 f6720d4cee6fb07545fd96b3d4a3f1e1 119 PANTHER PTHR34039 1 119 1.0E-37 T 23-04-2016 CYCME_RS09855 f6720d4cee6fb07545fd96b3d4a3f1e1 119 PANTHER PTHR34039:SF1 1 119 1.0E-37 T 23-04-2016 CYCME_RS09855 f6720d4cee6fb07545fd96b3d4a3f1e1 119 Gene3D G3DSA:3.40.1350.10 12 117 5.4E-35 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CYCME_RS09855 f6720d4cee6fb07545fd96b3d4a3f1e1 119 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 113 22.223 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 CYCME_RS09855 f6720d4cee6fb07545fd96b3d4a3f1e1 119 SUPERFAMILY SSF52980 11 107 1.06E-20 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CYCME_RS09855 f6720d4cee6fb07545fd96b3d4a3f1e1 119 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 117 7.8E-35 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 CYCME_RS03475 135027722a5b9622835101312b35f27a 161 Pfam PF04093 rod shape-determining protein MreD 11 152 7.0E-26 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CYCME_RS03475 135027722a5b9622835101312b35f27a 161 PIRSF PIRSF018472 2 161 1.1E-44 T 23-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type CYCME_RS03475 135027722a5b9622835101312b35f27a 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 152 7.7E-28 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CYCME_RS03475 135027722a5b9622835101312b35f27a 161 PANTHER PTHR37484 1 161 2.6E-45 T 23-04-2016 CYCME_RS00630 b1c86afd7a3656c9ae5c74ba1db28cd3 223 Gene3D G3DSA:3.30.65.10 177 219 1.8E-7 T 23-04-2016 CYCME_RS00630 b1c86afd7a3656c9ae5c74ba1db28cd3 223 Pfam PF10881 Protein of unknown function (DUF2726) 39 159 1.0E-38 T 23-04-2016 IPR024402 Domain of unknown function DUF2726 CYCME_RS00630 b1c86afd7a3656c9ae5c74ba1db28cd3 223 SUPERFAMILY SSF57783 177 220 2.55E-7 T 23-04-2016 CYCME_RS00630 b1c86afd7a3656c9ae5c74ba1db28cd3 223 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 182 222 5.9E-12 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CYCME_RS00630 b1c86afd7a3656c9ae5c74ba1db28cd3 223 PIRSF PIRSF028063 3 223 1.6E-33 T 23-04-2016 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger CYCME_RS01120 d17e065d92e4e5438da9e136894b8f6b 789 SUPERFAMILY SSF82866 583 779 7.98E-30 T 23-04-2016 CYCME_RS01120 d17e065d92e4e5438da9e136894b8f6b 789 Pfam PF03176 MMPL family 202 387 5.2E-9 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS01120 d17e065d92e4e5438da9e136894b8f6b 789 Pfam PF03176 MMPL family 476 774 1.7E-20 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CYCME_RS01120 d17e065d92e4e5438da9e136894b8f6b 789 Gene3D G3DSA:1.20.1640.10 580 782 2.8E-28 T 23-04-2016 CYCME_RS01120 d17e065d92e4e5438da9e136894b8f6b 789 Gene3D G3DSA:1.20.1640.10 232 395 2.0E-23 T 23-04-2016 CYCME_RS01120 d17e065d92e4e5438da9e136894b8f6b 789 PANTHER PTHR33406 5 106 2.5E-60 T 23-04-2016 CYCME_RS01120 d17e065d92e4e5438da9e136894b8f6b 789 PANTHER PTHR33406 141 775 2.5E-60 T 23-04-2016 CYCME_RS01120 d17e065d92e4e5438da9e136894b8f6b 789 SUPERFAMILY SSF82866 197 387 5.23E-25 T 23-04-2016 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 SUPERFAMILY SSF52374 3 155 5.36E-42 T 23-04-2016 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 Pfam PF01467 Cytidylyltransferase-like 6 134 2.2E-20 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 33.609 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 1.0E-57 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 Gene3D G3DSA:3.40.50.620 3 157 6.6E-52 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 PANTHER PTHR21342 1 159 4.4E-66 T 23-04-2016 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.2E-42 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.2E-42 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.2E-42 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.2E-42 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.2E-42 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 1.1E-15 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CYCME_RS03180 25be98c1d74ab2fe8e97d941cc8ae3c8 159 PANTHER PTHR21342:SF1 1 159 4.4E-66 T 23-04-2016 CYCME_RS03490 9676db5a9c0872674e46d37f1d75edfc 95 PANTHER PTHR15004 1 95 5.2E-26 T 23-04-2016 CYCME_RS03490 9676db5a9c0872674e46d37f1d75edfc 95 SUPERFAMILY SSF141000 3 93 1.44E-28 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CYCME_RS03490 9676db5a9c0872674e46d37f1d75edfc 95 PANTHER PTHR15004:SF0 1 95 5.2E-26 T 23-04-2016 CYCME_RS03490 9676db5a9c0872674e46d37f1d75edfc 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 90 1.6E-18 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CYCME_RS03490 9676db5a9c0872674e46d37f1d75edfc 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.842 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CYCME_RS03490 9676db5a9c0872674e46d37f1d75edfc 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 1.1E-28 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 218 3.2E-41 T 23-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 Pfam PF11867 Domain of unknown function (DUF3387) 727 1056 4.4E-119 T 23-04-2016 IPR021810 Protein of unknown function DUF3387 CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 PANTHER PTHR30195:SF15 314 989 2.4E-258 T 23-04-2016 CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 PANTHER PTHR30195:SF15 34 293 2.4E-258 T 23-04-2016 CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 SUPERFAMILY SSF52540 238 532 7.4E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 Gene3D G3DSA:3.40.50.300 277 484 2.9E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 SMART SM00487 295 507 5.8E-8 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 6 729 7.5E-185 T 23-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 SUPERFAMILY SSF52540 562 710 6.64E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 SUPERFAMILY SSF52540 427 506 6.64E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 PANTHER PTHR30195 314 989 2.4E-258 T 23-04-2016 CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 PANTHER PTHR30195 34 293 2.4E-258 T 23-04-2016 CYCME_RS04835 669e9732490facdec1229f9775b069ea 1060 Pfam PF04851 Type III restriction enzyme, res subunit 291 474 1.8E-14 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 746 2.0E-93 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 SUPERFAMILY SSF51735 163 450 6.37E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 SUPERFAMILY SSF53223 10 161 8.63E-54 T 23-04-2016 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 PIRSF PIRSF036684 1 755 0.0 T 23-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 7.1E-24 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 SMART SM00919 163 399 2.5E-127 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 Gene3D G3DSA:3.40.50.720 161 447 4.3E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 Gene3D G3DSA:3.40.50.10380 8 160 2.7E-53 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 SUPERFAMILY SSF53659 428 748 2.38E-82 T 23-04-2016 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 Gene3D G3DSA:3.40.50.10750 568 724 4.1E-49 T 23-04-2016 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.6E-29 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 SMART SM01274 18 151 2.6E-82 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 PANTHER PTHR23406 371 444 1.6E-162 T 23-04-2016 CYCME_RS10140 bd2b0e9baeeb5de1fb74866fcf14c20f 755 PANTHER PTHR23406 34 355 1.6E-162 T 23-04-2016 CYCME_RS11525 5de749f70b0bc074551527c4139ebadc 258 Gene3D G3DSA:1.25.40.10 17 219 1.9E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS11525 5de749f70b0bc074551527c4139ebadc 258 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 11 230 4.2E-78 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD CYCME_RS11525 5de749f70b0bc074551527c4139ebadc 258 SUPERFAMILY SSF48452 18 97 1.78E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS11525 5de749f70b0bc074551527c4139ebadc 258 PANTHER PTHR37423 10 251 3.3E-76 T 23-04-2016 CYCME_RS11525 5de749f70b0bc074551527c4139ebadc 258 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 229 39.852 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD CYCME_RS11525 5de749f70b0bc074551527c4139ebadc 258 Pfam PF13525 Outer membrane lipoprotein 17 221 4.4E-64 T 23-04-2016 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 PANTHER PTHR33280:SF2 1 65 2.4E-36 T 23-04-2016 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 PRINTS PR01249 Ribosomal protein L31 signature 32 47 6.8E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.8E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 PRINTS PR01249 Ribosomal protein L31 signature 47 65 6.8E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 27.513 T 23-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 SUPERFAMILY SSF143800 1 66 9.42E-27 T 23-04-2016 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 PANTHER PTHR33280 1 65 2.4E-36 T 23-04-2016 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 Pfam PF01197 Ribosomal protein L31 1 66 6.2E-33 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00240 d5deed2e644aeef1ce2b30ccade08d78 68 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 9.4E-34 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 Gene3D G3DSA:3.80.30.20 55 286 2.7E-25 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 PIRSF PIRSF000167 3 460 8.5E-164 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 PANTHER PTHR13932 1 456 5.8E-220 T 23-04-2016 CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 Pfam PF04055 Radical SAM superfamily 59 232 3.2E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 SUPERFAMILY SSF102114 5 448 2.88E-127 T 23-04-2016 CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 PANTHER PTHR13932:SF6 1 456 5.8E-220 T 23-04-2016 CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 Pfam PF06969 HemN C-terminal domain 368 435 1.8E-6 T 23-04-2016 IPR010723 HemN, C-terminal CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 SMART SM00729 53 277 1.7E-44 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS00530 92e372ab6e5451ce5f76e4231c9dc711 461 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 461 4.2E-186 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 CYCME_RS08285 96514690c4a59d6aa2b02375638bda7f 119 Pfam PF00583 Acetyltransferase (GNAT) family 2 75 7.4E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CYCME_RS08285 96514690c4a59d6aa2b02375638bda7f 119 Gene3D G3DSA:3.40.630.30 2 113 2.5E-45 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS08285 96514690c4a59d6aa2b02375638bda7f 119 SUPERFAMILY SSF55729 2 75 1.08E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS08285 96514690c4a59d6aa2b02375638bda7f 119 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 2 111 3.6E-40 T 23-04-2016 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178|UniPathway: UPA00067 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 SUPERFAMILY SSF117892 51 185 2.22E-38 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 PANTHER PTHR10264 5 270 3.2E-85 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 SMART SM00244 20 178 1.0E-54 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 PRINTS PR00721 Stomatin signature 110 127 1.8E-26 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 PRINTS PR00721 Stomatin signature 75 96 1.8E-26 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 PRINTS PR00721 Stomatin signature 27 49 1.8E-26 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 PRINTS PR00721 Stomatin signature 130 153 1.8E-26 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 PRINTS PR00721 Stomatin signature 173 194 1.8E-26 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 PRINTS PR00721 Stomatin signature 154 172 1.8E-26 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 PANTHER PTHR10264:SF27 5 270 3.2E-85 T 23-04-2016 CYCME_RS00760 9a7e8462437c5b9ce2edbe90788488c2 282 Pfam PF01145 SPFH domain / Band 7 family 25 195 7.1E-35 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS02260 6d8f472a7414e85c33c41a37b50e469a 253 PANTHER PTHR22916 7 241 1.3E-26 T 23-04-2016 CYCME_RS02260 6d8f472a7414e85c33c41a37b50e469a 253 SUPERFAMILY SSF53448 57 249 1.41E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS02260 6d8f472a7414e85c33c41a37b50e469a 253 Pfam PF13641 Glycosyltransferase like family 2 63 232 2.7E-6 T 23-04-2016 CYCME_RS02260 6d8f472a7414e85c33c41a37b50e469a 253 Gene3D G3DSA:3.90.550.10 55 242 1.3E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS02260 6d8f472a7414e85c33c41a37b50e469a 253 PANTHER PTHR22916:SF16 7 241 1.3E-26 T 23-04-2016 CYCME_RS06905 6df46031d73d8cc79a67e429e97ee68c 472 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 313 450 1.3E-10 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CYCME_RS06905 6df46031d73d8cc79a67e429e97ee68c 472 Pfam PF13440 Polysaccharide biosynthesis protein 18 309 4.5E-64 T 23-04-2016 CYCME_RS06905 6df46031d73d8cc79a67e429e97ee68c 472 PANTHER PTHR30250 1 471 3.5E-36 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 Gene3D G3DSA:3.30.2090.10 185 269 3.0E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 Gene3D G3DSA:3.30.2090.10 722 807 2.9E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 PANTHER PTHR32063 2 1052 0.0 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 8.2E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 8.2E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 8.2E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 8.2E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 8.2E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.2E-26 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 Gene3D G3DSA:1.10.3850.10 813 1040 5.8E-49 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 Gene3D G3DSA:1.10.3850.10 278 506 2.0E-62 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 Pfam PF00873 AcrB/AcrD/AcrF family 6 1037 8.4E-249 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 SUPERFAMILY SSF82693 46 128 7.32E-20 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 SUPERFAMILY SSF82866 805 1042 2.62E-46 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 Gene3D G3DSA:3.30.70.1430 46 141 1.5E-22 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1046 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 SUPERFAMILY SSF82693 137 184 1.2E-21 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 SUPERFAMILY SSF82693 271 327 1.2E-21 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 SUPERFAMILY SSF82714 723 807 2.62E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 SUPERFAMILY SSF82866 294 505 2.75E-39 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 PANTHER PTHR32063:SF19 2 1052 0.0 T 23-04-2016 CYCME_RS06370 d68ae83264629334101663a9b2f828aa 1058 SUPERFAMILY SSF82714 185 269 1.96E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS05685 e20a4a52d4aba5c9aa0549883aae44ae 371 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 5.2E-91 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05685 e20a4a52d4aba5c9aa0549883aae44ae 371 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 357 56.902 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05685 e20a4a52d4aba5c9aa0549883aae44ae 371 PANTHER PTHR21148:SF26 1 362 6.9E-172 T 23-04-2016 CYCME_RS05685 e20a4a52d4aba5c9aa0549883aae44ae 371 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 365 2.9E-168 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05685 e20a4a52d4aba5c9aa0549883aae44ae 371 SUPERFAMILY SSF51713 1 362 2.62E-160 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05685 e20a4a52d4aba5c9aa0549883aae44ae 371 PANTHER PTHR21148 1 362 6.9E-172 T 23-04-2016 CYCME_RS05685 e20a4a52d4aba5c9aa0549883aae44ae 371 Gene3D G3DSA:3.20.20.105 1 364 3.8E-165 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS05685 e20a4a52d4aba5c9aa0549883aae44ae 371 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 365 1.1E-161 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 Gene3D G3DSA:3.40.50.300 2 171 3.4E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 PANTHER PTHR21087 3 169 6.7E-57 T 23-04-2016 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 Pfam PF01202 Shikimate kinase 13 170 1.3E-49 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 27.782 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 PRINTS PR01100 Shikimate kinase family signature 98 115 1.9E-22 T 23-04-2016 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 PRINTS PR01100 Shikimate kinase family signature 77 86 1.9E-22 T 23-04-2016 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 PRINTS PR01100 Shikimate kinase family signature 31 44 1.9E-22 T 23-04-2016 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 PRINTS PR01100 Shikimate kinase family signature 7 22 1.9E-22 T 23-04-2016 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 PRINTS PR01100 Shikimate kinase family signature 59 67 1.9E-22 T 23-04-2016 CYCME_RS00305 fd052aae32551eebae0c6a89ff694837 172 SUPERFAMILY SSF52540 5 169 5.03E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09380 8961ec945e0ca7f82c55f0e61aeefe01 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 294 1.2E-103 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 CYCME_RS09380 8961ec945e0ca7f82c55f0e61aeefe01 302 Gene3D G3DSA:3.40.50.720 1 199 2.4E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09380 8961ec945e0ca7f82c55f0e61aeefe01 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 222 2.1E-21 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CYCME_RS09380 8961ec945e0ca7f82c55f0e61aeefe01 302 Gene3D G3DSA:3.90.25.10 200 245 1.3E-5 T 23-04-2016 CYCME_RS09380 8961ec945e0ca7f82c55f0e61aeefe01 302 PANTHER PTHR11092 1 302 2.5E-128 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 CYCME_RS09380 8961ec945e0ca7f82c55f0e61aeefe01 302 Pfam PF08338 Domain of unknown function (DUF1731) 251 297 4.2E-17 T 23-04-2016 IPR013549 Domain of unknown function DUF1731 CYCME_RS09380 8961ec945e0ca7f82c55f0e61aeefe01 302 SUPERFAMILY SSF51735 2 299 9.69E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09380 8961ec945e0ca7f82c55f0e61aeefe01 302 PANTHER PTHR11092:SF0 1 302 2.5E-128 T 23-04-2016 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 7.1E-26 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 1.3E-51 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 Pfam PF03129 Anticodon binding domain 473 565 2.1E-18 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 SUPERFAMILY SSF55826 218 380 1.7E-29 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 Gene3D G3DSA:3.90.960.10 254 385 7.4E-31 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.4E-20 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 5.4E-20 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 5.4E-20 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 5.4E-20 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PIRSF PIRSF001535 1 570 1.3E-272 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 SUPERFAMILY SSF55681 405 476 8.76E-108 T 23-04-2016 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 SUPERFAMILY SSF55681 10 237 8.76E-108 T 23-04-2016 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PANTHER PTHR11451:SF3 4 244 1.4E-155 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PANTHER PTHR11451:SF3 397 570 1.4E-155 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 569 42.153 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 563 2.2E-242 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PANTHER PTHR11451 4 244 1.4E-155 T 23-04-2016 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 PANTHER PTHR11451 397 570 1.4E-155 T 23-04-2016 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 SUPERFAMILY SSF52954 461 568 1.08E-31 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 Gene3D G3DSA:3.30.930.10 387 469 2.2E-109 T 23-04-2016 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 Gene3D G3DSA:3.30.930.10 11 234 2.2E-109 T 23-04-2016 CYCME_RS11925 9048eb5980de8806a1707baec86762d2 570 Gene3D G3DSA:3.40.50.800 470 569 1.4E-29 T 23-04-2016 IPR004154 Anticodon-binding CYCME_RS03705 5d00123e4202d8cfc121a0b3d89deffa 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.0E-55 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CYCME_RS03705 5d00123e4202d8cfc121a0b3d89deffa 122 SMART SM01374 1 122 2.8E-86 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CYCME_RS03705 5d00123e4202d8cfc121a0b3d89deffa 122 PANTHER PTHR11761 1 122 2.6E-75 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CYCME_RS03705 5d00123e4202d8cfc121a0b3d89deffa 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.7E-58 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CYCME_RS03705 5d00123e4202d8cfc121a0b3d89deffa 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.271 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CYCME_RS03705 5d00123e4202d8cfc121a0b3d89deffa 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site CYCME_RS03705 5d00123e4202d8cfc121a0b3d89deffa 122 SUPERFAMILY SSF50193 1 122 4.97E-52 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CYCME_RS03705 5d00123e4202d8cfc121a0b3d89deffa 122 Gene3D G3DSA:2.40.150.20 1 122 3.2E-55 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 PANTHER PTHR21621:SF4 1 313 1.4E-145 T 23-04-2016 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 Gene3D G3DSA:3.40.50.20 1 128 3.9E-52 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 SUPERFAMILY SSF56059 122 311 2.8E-55 T 23-04-2016 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 Hamap MF_00162 Glutathione synthetase [gshB]. 1 313 166.379 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 6.9E-44 T 23-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 295 5.4E-77 T 23-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 Gene3D G3DSA:3.30.470.20 191 298 9.8E-49 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 PANTHER PTHR21621 1 313 1.4E-145 T 23-04-2016 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 Gene3D G3DSA:3.30.1490.20 136 190 1.1E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 SUPERFAMILY SSF52440 1 121 1.12E-42 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS01335 13e3b452f3637057ee7344846c63e529 313 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 311 2.0E-134 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 SUPERFAMILY SSF101386 151 242 2.45E-23 T 23-04-2016 CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 PANTHER PTHR30522 12 269 7.0E-110 T 23-04-2016 CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 35 108 1.1E-28 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 173 232 1.7E-6 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 SUPERFAMILY SSF101386 11 109 2.62E-24 T 23-04-2016 CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 Gene3D G3DSA:1.10.287.1080 27 80 1.2E-9 T 23-04-2016 CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 Gene3D G3DSA:1.10.287.1080 139 220 1.9E-12 T 23-04-2016 CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 PANTHER PTHR30522:SF0 12 269 7.0E-110 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG CYCME_RS05475 0b8c36d344b988cc39722479bd469c09 269 TIGRFAM TIGR00444 mazG: MazG family protein 18 263 6.3E-87 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG CYCME_RS09705 e252cee5658b62b6f45e4530028cb756 359 PIRSF PIRSF006004 2 358 2.3E-148 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS09705 e252cee5658b62b6f45e4530028cb756 359 PANTHER PTHR30544 2 355 2.7E-181 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS09705 e252cee5658b62b6f45e4530028cb756 359 SUPERFAMILY SSF102114 101 305 3.4E-16 T 23-04-2016 CYCME_RS09705 e252cee5658b62b6f45e4530028cb756 359 Pfam PF04055 Radical SAM superfamily 108 269 5.4E-19 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS09705 e252cee5658b62b6f45e4530028cb756 359 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 345 74.245 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS09705 e252cee5658b62b6f45e4530028cb756 359 Gene3D G3DSA:3.20.20.70 105 303 2.3E-15 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09705 e252cee5658b62b6f45e4530028cb756 359 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 349 8.9E-142 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CYCME_RS09705 e252cee5658b62b6f45e4530028cb756 359 PANTHER PTHR30544:SF5 2 355 2.7E-181 T 23-04-2016 CYCME_RS05485 e29e75b161e0e4466acd0e288d5042e7 406 PANTHER PTHR30454 12 400 3.7E-142 T 23-04-2016 CYCME_RS05485 e29e75b161e0e4466acd0e288d5042e7 406 SUPERFAMILY SSF51717 14 239 2.75E-5 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CYCME_RS05485 e29e75b161e0e4466acd0e288d5042e7 406 PIRSF PIRSF004640 1 406 2.0E-131 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CYCME_RS05485 e29e75b161e0e4466acd0e288d5042e7 406 Pfam PF04551 GcpE protein 12 397 6.2E-115 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CYCME_RS05485 e29e75b161e0e4466acd0e288d5042e7 406 SUPERFAMILY SSF56014 295 399 2.09E-6 T 23-04-2016 CYCME_RS05485 e29e75b161e0e4466acd0e288d5042e7 406 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 399 29.44 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CYCME_RS05485 e29e75b161e0e4466acd0e288d5042e7 406 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 397 7.1E-121 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CYCME_RS01115 ecc8e9390de39987db54486bbd161598 322 Gene3D G3DSA:2.130.10.10 40 274 4.6E-24 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS01115 ecc8e9390de39987db54486bbd161598 322 SUPERFAMILY SSF110296 42 273 1.2E-33 T 23-04-2016 CYCME_RS01115 ecc8e9390de39987db54486bbd161598 322 Pfam PF14870 Photosynthesis system II assembly factor YCF48 66 309 2.7E-20 T 23-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain CYCME_RS06780 bae58c77bf245cc874be29a695db9b0e 320 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 3 314 1.8E-137 T 23-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein CYCME_RS06780 bae58c77bf245cc874be29a695db9b0e 320 Gene3D G3DSA:3.30.470.20 232 285 1.4E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS06780 bae58c77bf245cc874be29a695db9b0e 320 SUPERFAMILY SSF56059 230 277 9.26E-20 T 23-04-2016 CYCME_RS06780 bae58c77bf245cc874be29a695db9b0e 320 SUPERFAMILY SSF56059 32 184 9.26E-20 T 23-04-2016 CYCME_RS06780 bae58c77bf245cc874be29a695db9b0e 320 Pfam PF14397 Sugar-transfer associated ATP-grasp 20 293 2.7E-111 T 23-04-2016 CYCME_RS06780 bae58c77bf245cc874be29a695db9b0e 320 Gene3D G3DSA:3.30.470.20 160 205 6.5E-4 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS06780 bae58c77bf245cc874be29a695db9b0e 320 Gene3D G3DSA:3.30.1490.20 66 98 8.5E-4 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS08775 8ff6ae6b30c02a0c55f3989281ebbfc5 323 Gene3D G3DSA:3.30.2010.10 144 200 8.5E-7 T 23-04-2016 CYCME_RS08775 8ff6ae6b30c02a0c55f3989281ebbfc5 323 Pfam PF01435 Peptidase family M48 130 210 2.0E-7 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CYCME_RS01750 2720889da488ceb3aa16b60fc1c62d61 223 Pfam PF02230 Phospholipase/Carboxylesterase 9 221 3.4E-50 T 23-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CYCME_RS01750 2720889da488ceb3aa16b60fc1c62d61 223 Gene3D G3DSA:3.40.50.1820 9 221 8.0E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS01750 2720889da488ceb3aa16b60fc1c62d61 223 PANTHER PTHR10655 9 223 4.2E-65 T 23-04-2016 CYCME_RS01750 2720889da488ceb3aa16b60fc1c62d61 223 PANTHER PTHR10655:SF17 9 223 4.2E-65 T 23-04-2016 CYCME_RS01750 2720889da488ceb3aa16b60fc1c62d61 223 SUPERFAMILY SSF53474 12 221 4.5E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS08210 5d56bf722bea9623d9fedd1b6701981d 369 Gene3D G3DSA:1.10.620.20 43 343 2.3E-78 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CYCME_RS08210 5d56bf722bea9623d9fedd1b6701981d 369 Pfam PF00268 Ribonucleotide reductase, small chain 55 334 1.1E-57 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CYCME_RS08210 5d56bf722bea9623d9fedd1b6701981d 369 PANTHER PTHR23409 9 365 1.5E-81 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CYCME_RS08210 5d56bf722bea9623d9fedd1b6701981d 369 PIRSF PIRSF000355 24 369 7.0E-114 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CYCME_RS08210 5d56bf722bea9623d9fedd1b6701981d 369 SUPERFAMILY SSF47240 38 363 1.96E-77 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS08210 5d56bf722bea9623d9fedd1b6701981d 369 PANTHER PTHR23409:SF18 9 365 1.5E-81 T 23-04-2016 CYCME_RS05405 bb0ce1632bdc4f79f0ea1d7e78b07905 285 PANTHER PTHR11825:SF55 13 258 2.5E-65 T 23-04-2016 CYCME_RS05405 bb0ce1632bdc4f79f0ea1d7e78b07905 285 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 5 249 2.5E-77 T 23-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 CYCME_RS05405 bb0ce1632bdc4f79f0ea1d7e78b07905 285 Pfam PF01063 Amino-transferase class IV 26 247 2.1E-47 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS05405 bb0ce1632bdc4f79f0ea1d7e78b07905 285 SUPERFAMILY SSF56752 5 276 1.31E-59 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS05405 bb0ce1632bdc4f79f0ea1d7e78b07905 285 Gene3D G3DSA:3.30.470.10 5 108 8.1E-28 T 23-04-2016 CYCME_RS05405 bb0ce1632bdc4f79f0ea1d7e78b07905 285 ProSitePatterns PS00770 Aminotransferases class-IV signature. 174 203 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS05405 bb0ce1632bdc4f79f0ea1d7e78b07905 285 Gene3D G3DSA:3.20.10.10 124 251 1.7E-37 T 23-04-2016 CYCME_RS05405 bb0ce1632bdc4f79f0ea1d7e78b07905 285 PANTHER PTHR11825 13 258 2.5E-65 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 Pfam PF00202 Aminotransferase class-III 130 514 1.4E-34 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 334 370 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 PANTHER PTHR11986 131 289 1.1E-64 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 PANTHER PTHR11986 308 521 1.1E-64 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 Gene3D G3DSA:3.40.640.10 184 420 9.3E-52 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 SUPERFAMILY SSF53383 116 515 6.12E-60 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 PANTHER PTHR11986:SF5 131 289 1.1E-64 T 23-04-2016 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 PANTHER PTHR11986:SF5 308 521 1.1E-64 T 23-04-2016 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 Gene3D G3DSA:3.90.1150.10 130 165 2.0E-10 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS01165 647d9b44e47269f0a2180726679d282b 559 Gene3D G3DSA:3.90.1150.10 425 513 2.0E-10 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS01190 89fbccaa006fd9cc105b6e733b0305a4 227 Pfam PF02562 PhoH-like protein 19 220 4.7E-70 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 CYCME_RS01190 89fbccaa006fd9cc105b6e733b0305a4 227 PANTHER PTHR30473 19 225 5.6E-70 T 23-04-2016 CYCME_RS01190 89fbccaa006fd9cc105b6e733b0305a4 227 Gene3D G3DSA:3.40.50.300 18 220 3.4E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01190 89fbccaa006fd9cc105b6e733b0305a4 227 SUPERFAMILY SSF52540 18 174 6.74E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01505 63dc3066a1c1ae630307feba28486606 128 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 31.959 T 23-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CYCME_RS01505 63dc3066a1c1ae630307feba28486606 128 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 107 2.0E-20 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CYCME_RS01505 63dc3066a1c1ae630307feba28486606 128 PANTHER PTHR21256 1 128 1.0E-58 T 23-04-2016 CYCME_RS01505 63dc3066a1c1ae630307feba28486606 128 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 3.8E-34 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CYCME_RS01505 63dc3066a1c1ae630307feba28486606 128 SUPERFAMILY SSF141734 3 118 2.88E-48 T 23-04-2016 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 16 225 1.9E-61 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 ProSitePatterns PS01218 TatC family signature. 158 177 - T 23-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 PANTHER PTHR30371:SF0 2 250 5.4E-97 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 247 17.57 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 14 230 6.5E-67 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 1.4E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 1.4E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 1.4E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 1.4E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CYCME_RS01490 94732b450be169cb8d2f02b0c55d5e96 250 PANTHER PTHR30371 2 250 5.4E-97 T 23-04-2016 CYCME_RS00940 8f3345d264f162641d1a52dfdc7b3e36 106 SUPERFAMILY SSF52821 2 101 1.05E-32 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS00940 8f3345d264f162641d1a52dfdc7b3e36 106 PANTHER PTHR12231 22 98 1.5E-14 T 23-04-2016 CYCME_RS00940 8f3345d264f162641d1a52dfdc7b3e36 106 Pfam PF00581 Rhodanese-like domain 5 97 1.3E-18 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS00940 8f3345d264f162641d1a52dfdc7b3e36 106 Gene3D G3DSA:3.40.250.10 1 105 1.4E-32 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS00940 8f3345d264f162641d1a52dfdc7b3e36 106 SMART SM00450 6 101 8.2E-23 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS07840 9ad26e790a54b00cf6c662c8f91cc122 193 Pfam PF00293 NUDIX domain 45 148 6.5E-8 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CYCME_RS07840 9ad26e790a54b00cf6c662c8f91cc122 193 SUPERFAMILY SSF55811 9 189 2.17E-45 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS07840 9ad26e790a54b00cf6c662c8f91cc122 193 PANTHER PTHR11839 9 189 2.0E-40 T 23-04-2016 CYCME_RS07840 9ad26e790a54b00cf6c662c8f91cc122 193 Gene3D G3DSA:3.90.79.10 4 189 1.3E-55 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS07840 9ad26e790a54b00cf6c662c8f91cc122 193 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 188 4.0E-51 T 23-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 CYCME_RS11155 094e04ddf16487e2dffd4da43f8d6837 92 Hamap MF_00910 Cell division protein FtsL [ftsL]. 6 89 16.082 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CYCME_RS11155 094e04ddf16487e2dffd4da43f8d6837 92 Pfam PF04999 Cell division protein FtsL 9 90 8.8E-27 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CYCME_RS11155 094e04ddf16487e2dffd4da43f8d6837 92 PANTHER PTHR37479 9 92 3.0E-23 T 23-04-2016 CYCME_RS11155 094e04ddf16487e2dffd4da43f8d6837 92 PANTHER PTHR37479:SF1 9 92 3.0E-23 T 23-04-2016 CYCME_RS11155 094e04ddf16487e2dffd4da43f8d6837 92 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 10 90 3.3E-25 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CYCME_RS04695 e936301dfa6919309aca125629804609 348 SUPERFAMILY SSF53474 62 330 1.3E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS04695 e936301dfa6919309aca125629804609 348 Gene3D G3DSA:3.40.50.1820 43 341 4.1E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS04695 e936301dfa6919309aca125629804609 348 Pfam PF00561 alpha/beta hydrolase fold 78 331 2.0E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS04695 e936301dfa6919309aca125629804609 348 PANTHER PTHR36837 32 336 2.8E-98 T 23-04-2016 CYCME_RS04695 e936301dfa6919309aca125629804609 348 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 15 344 4.4E-111 T 23-04-2016 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 CYCME_RS05990 ffd74cb71a784d8a1e48a4e667831ff4 254 Gene3D G3DSA:3.90.226.10 1 253 8.5E-86 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05990 ffd74cb71a784d8a1e48a4e667831ff4 254 PANTHER PTHR11941:SF54 1 252 1.6E-90 T 23-04-2016 CYCME_RS05990 ffd74cb71a784d8a1e48a4e667831ff4 254 SUPERFAMILY SSF52096 1 252 3.02E-79 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05990 ffd74cb71a784d8a1e48a4e667831ff4 254 PANTHER PTHR11941 1 252 1.6E-90 T 23-04-2016 CYCME_RS05990 ffd74cb71a784d8a1e48a4e667831ff4 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 253 5.5E-70 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 PIRSF PIRSF036402 1 149 8.1E-45 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 Pfam PF02814 UreE urease accessory protein, N-terminal domain 12 65 4.0E-17 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 Gene3D G3DSA:3.30.70.790 72 142 5.4E-29 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 SUPERFAMILY SSF69737 71 138 3.27E-20 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 Gene3D G3DSA:2.60.260.20 2 71 1.2E-24 T 23-04-2016 CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 Hamap MF_00822 Urease accessory protein UreE [ureE]. 3 139 23.031 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 SMART SM00988 2 65 2.0E-18 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 SUPERFAMILY SSF69287 2 71 3.01E-16 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal CYCME_RS00075 ae5b274a6f196be467e750851f242b56 149 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 149 2.8E-25 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 PANTHER PTHR21266:SF30 18 216 3.3E-54 T 23-04-2016 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 160 419 1.7E-28 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 PANTHER PTHR21266 18 216 3.3E-54 T 23-04-2016 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 Gene3D G3DSA:3.90.380.10 129 426 9.2E-93 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 83 106 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 55 70 9.7E-51 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 180 202 9.7E-51 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 76 96 9.7E-51 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 97 117 9.7E-51 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 140 166 9.7E-51 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 25 50 9.7E-51 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 Pfam PF00355 Rieske [2Fe-2S] domain 40 116 1.7E-13 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 SUPERFAMILY SSF55961 156 429 2.83E-60 T 23-04-2016 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 Gene3D G3DSA:2.102.10.10 27 116 6.7E-15 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS08130 22ca991724c70dedc29cf0c80d94b43e 438 SUPERFAMILY SSF50022 5 156 6.81E-40 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS01695 b6d8136c185fd49513b15d6a8a2ccd3d 247 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 238 1.2E-35 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01695 b6d8136c185fd49513b15d6a8a2ccd3d 247 Gene3D G3DSA:3.40.50.10090 4 129 1.3E-18 T 23-04-2016 CYCME_RS01695 b6d8136c185fd49513b15d6a8a2ccd3d 247 PANTHER PTHR38042:SF1 1 241 1.3E-35 T 23-04-2016 CYCME_RS01695 b6d8136c185fd49513b15d6a8a2ccd3d 247 SUPERFAMILY SSF69618 6 243 3.79E-45 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CYCME_RS01695 b6d8136c185fd49513b15d6a8a2ccd3d 247 Gene3D G3DSA:3.40.50.10090 136 246 1.6E-5 T 23-04-2016 CYCME_RS01695 b6d8136c185fd49513b15d6a8a2ccd3d 247 PANTHER PTHR38042 1 241 1.3E-35 T 23-04-2016 CYCME_RS12230 fe9ddc6580c6b301d85f5baf051d2397 139 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 25 137 7.0E-40 T 23-04-2016 IPR004891 MerC mercury resistance protein CYCME_RS12230 fe9ddc6580c6b301d85f5baf051d2397 139 Pfam PF03203 MerC mercury resistance protein 13 124 4.0E-17 T 23-04-2016 IPR004891 MerC mercury resistance protein CYCME_RS01050 fe9ddc6580c6b301d85f5baf051d2397 139 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 25 137 7.0E-40 T 23-04-2016 IPR004891 MerC mercury resistance protein CYCME_RS01050 fe9ddc6580c6b301d85f5baf051d2397 139 Pfam PF03203 MerC mercury resistance protein 13 124 4.0E-17 T 23-04-2016 IPR004891 MerC mercury resistance protein CYCME_RS00555 a21f5061a1fa34a700b7699584434fa6 219 SUPERFAMILY SSF52540 1 219 1.92E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00555 a21f5061a1fa34a700b7699584434fa6 219 Pfam PF00005 ABC transporter 21 169 2.4E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS00555 a21f5061a1fa34a700b7699584434fa6 219 PANTHER PTHR24220:SF578 3 219 6.4E-105 T 23-04-2016 CYCME_RS00555 a21f5061a1fa34a700b7699584434fa6 219 SMART SM00382 30 217 1.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00555 a21f5061a1fa34a700b7699584434fa6 219 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS00555 a21f5061a1fa34a700b7699584434fa6 219 PANTHER PTHR24220 3 219 6.4E-105 T 23-04-2016 CYCME_RS00555 a21f5061a1fa34a700b7699584434fa6 219 Gene3D G3DSA:3.40.50.300 1 219 2.0E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04965 8ad67a52f5db631f5e506fcbac38a17e 95 PANTHER PTHR31846 1 92 4.4E-24 T 23-04-2016 CYCME_RS04965 8ad67a52f5db631f5e506fcbac38a17e 95 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 20 92 1.0E-15 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CYCME_RS04965 8ad67a52f5db631f5e506fcbac38a17e 95 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.6E-21 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CYCME_RS04965 8ad67a52f5db631f5e506fcbac38a17e 95 SMART SM01103 3 86 6.2E-38 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CYCME_RS04965 8ad67a52f5db631f5e506fcbac38a17e 95 SUPERFAMILY SSF75471 1 92 1.44E-27 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CYCME_RS04965 8ad67a52f5db631f5e506fcbac38a17e 95 Gene3D G3DSA:3.30.110.60 2 93 3.2E-31 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CYCME_RS04965 8ad67a52f5db631f5e506fcbac38a17e 95 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 93 3.4E-27 T 23-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 CYCME_RS11805 a086b4264dc61740fa6347bfa512d65f 129 Gene3D G3DSA:2.60.300.12 13 107 1.1E-24 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS11805 a086b4264dc61740fa6347bfa512d65f 129 Pfam PF01521 Iron-sulphur cluster biosynthesis 15 108 1.4E-14 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS11805 a086b4264dc61740fa6347bfa512d65f 129 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 16 120 3.1E-23 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 CYCME_RS11805 a086b4264dc61740fa6347bfa512d65f 129 PANTHER PTHR10072 13 107 3.2E-22 T 23-04-2016 CYCME_RS11805 a086b4264dc61740fa6347bfa512d65f 129 SUPERFAMILY SSF89360 13 107 1.57E-22 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS09410 ea3986c4ccba33634a14f0a72b080d37 126 SUPERFAMILY SSF53800 2 118 3.53E-30 T 23-04-2016 CYCME_RS09410 ea3986c4ccba33634a14f0a72b080d37 126 Gene3D G3DSA:3.40.50.1400 1 118 2.6E-35 T 23-04-2016 CYCME_RS09410 ea3986c4ccba33634a14f0a72b080d37 126 PANTHER PTHR33542 1 115 7.3E-34 T 23-04-2016 CYCME_RS09410 ea3986c4ccba33634a14f0a72b080d37 126 Pfam PF01903 CbiX 9 115 2.3E-27 T 23-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 SMART SM00116 278 325 0.045 T 23-04-2016 IPR000644 CBS domain CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 SMART SM00116 213 261 14.0 T 23-04-2016 IPR000644 CBS domain CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 PIRSF PIRSF004692 1 326 2.0E-131 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 Gene3D G3DSA:3.40.50.10490 17 194 6.5E-51 T 23-04-2016 CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 Gene3D G3DSA:3.10.580.10 195 323 1.1E-38 T 23-04-2016 CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 Pfam PF00571 CBS domain 204 260 0.0014 T 23-04-2016 IPR000644 CBS domain CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 Pfam PF00571 CBS domain 272 323 6.5E-6 T 23-04-2016 IPR000644 CBS domain CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 PANTHER PTHR38418 17 321 6.5E-41 T 23-04-2016 CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 Pfam PF01380 SIS domain 44 175 5.4E-29 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 316 2.7E-108 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 PANTHER PTHR38418:SF1 17 321 6.5E-41 T 23-04-2016 CYCME_RS04020 c9a7572fb581f7f5c5abaadc5850637d 326 SUPERFAMILY SSF53697 17 325 5.78E-72 T 23-04-2016 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 SUPERFAMILY SSF56672 7 236 1.16E-62 T 23-04-2016 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 352 3.3E-12 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 Pfam PF00817 impB/mucB/samB family 10 153 1.0E-31 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 SUPERFAMILY SSF100879 251 349 3.14E-6 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 PANTHER PTHR11076:SF40 7 389 3.2E-150 T 23-04-2016 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 Gene3D G3DSA:1.10.150.20 173 234 7.4E-16 T 23-04-2016 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 Gene3D G3DSA:3.30.1490.100 251 352 2.8E-6 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 PANTHER PTHR11076 7 389 3.2E-150 T 23-04-2016 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 Pfam PF13438 Domain of unknown function (DUF4113) 377 425 2.7E-11 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 CYCME_RS06715 841c4682e047c386e9c8145ac6f65230 426 Gene3D G3DSA:3.30.70.270 71 158 2.4E-18 T 23-04-2016 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 5 153 1.8E-49 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 414 2.3E-135 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 PIRSF PIRSF000445 1 416 1.0E-153 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 SUPERFAMILY SSF69075 314 415 6.67E-26 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 Gene3D G3DSA:3.40.50.720 160 308 3.2E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 PANTHER PTHR21089:SF3 269 356 2.6E-124 T 23-04-2016 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 PANTHER PTHR21089:SF3 14 253 2.6E-124 T 23-04-2016 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 96 119 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 PANTHER PTHR21089 269 356 2.6E-124 T 23-04-2016 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 PANTHER PTHR21089 14 253 2.6E-124 T 23-04-2016 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 1 415 30.707 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 303 1.6E-43 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 SUPERFAMILY SSF51735 160 312 1.78E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 SUPERFAMILY SSF69742 2 155 9.68E-47 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS03525 8d82bd31e9ae1c84617ca8f85afc0324 416 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 317 414 9.5E-24 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 Gene3D G3DSA:1.10.1040.10 193 292 2.1E-13 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 Gene3D G3DSA:1.10.1040.10 344 402 6.3E-10 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 Gene3D G3DSA:3.90.226.10 468 635 5.2E-20 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 PANTHER PTHR23309:SF2 1 453 4.6E-101 T 23-04-2016 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 SUPERFAMILY SSF51735 1 190 1.13E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 189 3.5E-45 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 Pfam PF00378 Enoyl-CoA hydratase/isomerase 471 605 1.4E-9 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 292 1.7E-11 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 366 396 1.4E-5 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 SUPERFAMILY SSF48179 342 431 1.19E-13 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 SUPERFAMILY SSF48179 190 298 4.25E-17 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 PANTHER PTHR23309 1 453 4.6E-101 T 23-04-2016 CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 SUPERFAMILY SSF52096 463 770 1.58E-31 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS09225 454a0f7d325322dbe66b88399e0c40cf 774 Gene3D G3DSA:3.40.50.720 2 192 7.7E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 Gene3D G3DSA:3.30.420.40 6 131 1.1E-39 T 23-04-2016 CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 SUPERFAMILY SSF53067 137 307 1.86E-35 T 23-04-2016 CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 SUPERFAMILY SSF109604 312 498 6.28E-34 T 23-04-2016 CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 Gene3D G3DSA:3.30.420.150 136 307 2.7E-39 T 23-04-2016 CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 Pfam PF02541 Ppx/GppA phosphatase family 26 306 7.0E-67 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 PIRSF PIRSF001267 3 502 6.5E-148 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 PANTHER PTHR30005 1 497 3.3E-129 T 23-04-2016 CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 SUPERFAMILY SSF53067 13 132 2.24E-32 T 23-04-2016 CYCME_RS04210 7aa16b5b903c6b76ee7624dbcbbb8caa 502 PANTHER PTHR30005:SF4 1 497 3.3E-129 T 23-04-2016 CYCME_RS10405 011cdc086a36dc236f7302b9f331ad7a 116 SMART SM00450 19 113 1.1E-5 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10405 011cdc086a36dc236f7302b9f331ad7a 116 Gene3D G3DSA:3.40.250.10 9 103 1.3E-20 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10405 011cdc086a36dc236f7302b9f331ad7a 116 Pfam PF00581 Rhodanese-like domain 25 104 4.1E-8 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10405 011cdc086a36dc236f7302b9f331ad7a 116 SUPERFAMILY SSF52821 17 104 7.99E-22 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS10995 6e21c944d1efd326ed4b7d98fc6ad023 416 Pfam PF13692 Glycosyl transferases group 1 238 374 1.5E-22 T 23-04-2016 CYCME_RS10995 6e21c944d1efd326ed4b7d98fc6ad023 416 Gene3D G3DSA:3.40.50.2000 208 385 4.5E-29 T 23-04-2016 CYCME_RS10995 6e21c944d1efd326ed4b7d98fc6ad023 416 SUPERFAMILY SSF53756 3 412 1.26E-64 T 23-04-2016 CYCME_RS10995 6e21c944d1efd326ed4b7d98fc6ad023 416 Pfam PF13439 Glycosyltransferase Family 4 13 218 2.0E-11 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CYCME_RS10995 6e21c944d1efd326ed4b7d98fc6ad023 416 PANTHER PTHR12526 207 412 5.0E-41 T 23-04-2016 CYCME_RS12135 70ecdc79fbca96bade137f380f8dffee 200 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 192 1.9E-69 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CYCME_RS12135 70ecdc79fbca96bade137f380f8dffee 200 SUPERFAMILY SSF52540 7 196 3.77E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12135 70ecdc79fbca96bade137f380f8dffee 200 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 196 27.278 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CYCME_RS12135 70ecdc79fbca96bade137f380f8dffee 200 Pfam PF01926 50S ribosome-binding GTPase 27 145 1.8E-19 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS12135 70ecdc79fbca96bade137f380f8dffee 200 PANTHER PTHR11649 27 197 4.3E-47 T 23-04-2016 CYCME_RS12135 70ecdc79fbca96bade137f380f8dffee 200 Gene3D G3DSA:3.40.50.300 17 196 3.4E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09390 a20526ef1e7fddf226059c6068b95f10 300 SMART SM00422 7 76 4.5E-19 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS09390 a20526ef1e7fddf226059c6068b95f10 300 Pfam PF13411 MerR HTH family regulatory protein 7 75 8.5E-17 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS09390 a20526ef1e7fddf226059c6068b95f10 300 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 33 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS09390 a20526ef1e7fddf226059c6068b95f10 300 PANTHER PTHR30204 1 143 2.8E-34 T 23-04-2016 CYCME_RS09390 a20526ef1e7fddf226059c6068b95f10 300 SUPERFAMILY SSF46955 7 95 4.17E-17 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS09390 a20526ef1e7fddf226059c6068b95f10 300 Gene3D G3DSA:1.10.1660.10 7 115 6.7E-19 T 23-04-2016 CYCME_RS09390 a20526ef1e7fddf226059c6068b95f10 300 PANTHER PTHR30204:SF19 1 143 2.8E-34 T 23-04-2016 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 Gene3D G3DSA:1.10.599.10 402 619 1.7E-72 T 23-04-2016 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 SMART SM00790 3 206 2.0E-102 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 SUPERFAMILY SSF48310 211 619 6.93E-120 T 23-04-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 220 619 6.4E-127 T 23-04-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 204 4.0E-71 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 PANTHER PTHR30038 3 619 7.9E-223 T 23-04-2016 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 SUPERFAMILY SSF56228 2 208 4.97E-69 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 PANTHER PTHR30038:SF0 3 619 7.9E-223 T 23-04-2016 CYCME_RS01535 ea2a591c38920bd6b51923180456c374 619 Gene3D G3DSA:3.60.9.10 2 208 5.0E-78 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 PANTHER PTHR11751 19 373 9.6E-91 T 23-04-2016 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 Gene3D G3DSA:3.90.1150.10 278 372 5.6E-19 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 373 57.327 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 Gene3D G3DSA:3.40.640.10 51 277 7.2E-69 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 15 372 1.3E-104 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 Pfam PF00155 Aminotransferase class I and II 38 368 1.1E-52 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 PANTHER PTHR11751:SF366 19 373 9.6E-91 T 23-04-2016 CYCME_RS09275 fc754832e8758ea84d14f67ec3a34196 373 SUPERFAMILY SSF53383 19 372 5.7E-79 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS05440 0d5af0829bffac4a38659bd9fc33d832 243 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 225 1.9E-36 T 23-04-2016 CYCME_RS05440 0d5af0829bffac4a38659bd9fc33d832 243 PANTHER PTHR37468 1 239 1.9E-62 T 23-04-2016 CYCME_RS05440 0d5af0829bffac4a38659bd9fc33d832 243 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 8 242 23.545 T 23-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 Gene3D G3DSA:2.40.10.10 81 133 1.7E-6 T 23-04-2016 CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 Pfam PF13365 Trypsin-like peptidase domain 221 327 2.3E-15 T 23-04-2016 CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 Gene3D G3DSA:2.40.10.10 276 358 8.8E-19 T 23-04-2016 CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 PANTHER PTHR22939:SF79 227 350 2.8E-19 T 23-04-2016 CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 PANTHER PTHR22939:SF79 78 114 2.8E-19 T 23-04-2016 CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 SUPERFAMILY SSF50494 73 114 1.82E-35 T 23-04-2016 IPR009003 Peptidase S1, PA clan CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 SUPERFAMILY SSF50494 223 352 1.82E-35 T 23-04-2016 IPR009003 Peptidase S1, PA clan CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 PANTHER PTHR22939 227 350 2.8E-19 T 23-04-2016 CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 PANTHER PTHR22939 78 114 2.8E-19 T 23-04-2016 CYCME_RS08125 5a15fb46b33e9bb825616fe1255e097a 361 Gene3D G3DSA:2.40.10.10 223 275 8.7E-16 T 23-04-2016 CYCME_RS02005 634aef07f1e40ae549320f59ad1015c2 82 PANTHER PTHR38040 2 76 1.0E-26 T 23-04-2016 CYCME_RS02005 634aef07f1e40ae549320f59ad1015c2 82 PANTHER PTHR38040:SF1 2 76 1.0E-26 T 23-04-2016 CYCME_RS02005 634aef07f1e40ae549320f59ad1015c2 82 Pfam PF04380 Membrane fusogenic activity 1 77 2.7E-27 T 23-04-2016 IPR007475 Membrane fusogenic activity CYCME_RS07805 c241a4d6972a8b2208b4153e24810994 327 PIRSF PIRSF002849 1 327 2.5E-130 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted CYCME_RS07805 c241a4d6972a8b2208b4153e24810994 327 Gene3D G3DSA:3.40.50.300 24 189 1.3E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07805 c241a4d6972a8b2208b4153e24810994 327 PANTHER PTHR11603 3 327 1.8E-146 T 23-04-2016 CYCME_RS07805 c241a4d6972a8b2208b4153e24810994 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 43 173 9.1E-63 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CYCME_RS07805 c241a4d6972a8b2208b4153e24810994 327 SUPERFAMILY SSF52540 6 299 1.98E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07805 c241a4d6972a8b2208b4153e24810994 327 PANTHER PTHR11603:SF148 3 327 1.8E-146 T 23-04-2016 CYCME_RS07805 c241a4d6972a8b2208b4153e24810994 327 Gene3D G3DSA:1.10.8.300 209 324 1.6E-41 T 23-04-2016 CYCME_RS03650 adb798d736372e398eee075908f13e33 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.0E-17 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03650 adb798d736372e398eee075908f13e33 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.0E-17 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03650 adb798d736372e398eee075908f13e33 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.0E-17 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03650 adb798d736372e398eee075908f13e33 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.947 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03650 adb798d736372e398eee075908f13e33 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.8E-45 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03650 adb798d736372e398eee075908f13e33 103 SMART SM01403 7 101 3.8E-56 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CYCME_RS03650 adb798d736372e398eee075908f13e33 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03650 adb798d736372e398eee075908f13e33 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.3E-35 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CYCME_RS03650 adb798d736372e398eee075908f13e33 103 PANTHER PTHR11700 1 102 2.0E-49 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03650 adb798d736372e398eee075908f13e33 103 Gene3D G3DSA:3.30.70.600 4 102 8.4E-43 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CYCME_RS03650 adb798d736372e398eee075908f13e33 103 SUPERFAMILY SSF54999 6 102 7.72E-37 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CYCME_RS04535 208f892a55ecc3c6e912acce2b4f268f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.5E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CYCME_RS04535 208f892a55ecc3c6e912acce2b4f268f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.5E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CYCME_RS04535 208f892a55ecc3c6e912acce2b4f268f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.5E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CYCME_RS04535 208f892a55ecc3c6e912acce2b4f268f 89 PANTHER PTHR34040:SF2 1 89 5.3E-34 T 23-04-2016 CYCME_RS04535 208f892a55ecc3c6e912acce2b4f268f 89 PIRSF PIRSF004669 1 89 8.9E-33 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CYCME_RS04535 208f892a55ecc3c6e912acce2b4f268f 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 4.1E-30 T 23-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CYCME_RS04535 208f892a55ecc3c6e912acce2b4f268f 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 1.0E-29 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CYCME_RS04535 208f892a55ecc3c6e912acce2b4f268f 89 PANTHER PTHR34040 1 89 5.3E-34 T 23-04-2016 CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 Gene3D G3DSA:3.40.30.10 1 79 1.2E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 SUPERFAMILY SSF52833 1 82 8.99E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 PRINTS PR00160 Glutaredoxin signature 4 22 4.5E-11 T 23-04-2016 IPR014025 Glutaredoxin subgroup CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 PRINTS PR00160 Glutaredoxin signature 46 59 4.5E-11 T 23-04-2016 IPR014025 Glutaredoxin subgroup CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 PRINTS PR00160 Glutaredoxin signature 60 73 4.5E-11 T 23-04-2016 IPR014025 Glutaredoxin subgroup CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 Pfam PF00462 Glutaredoxin 4 63 9.8E-21 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 2.6E-32 T 23-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 CYCME_RS10895 a8197f2b85f0de1c4155420c706d2ab9 83 PANTHER PTHR10168 2 82 1.6E-21 T 23-04-2016 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 SMART SM00388 264 328 1.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 Gene3D G3DSA:3.30.565.10 316 484 3.6E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 SUPERFAMILY SSF158472 212 260 5.1E-8 T 23-04-2016 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 PANTHER PTHR24423:SF531 152 165 6.0E-97 T 23-04-2016 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 PANTHER PTHR24423:SF531 205 483 6.0E-97 T 23-04-2016 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 SUPERFAMILY SSF55874 317 483 3.01E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 SMART SM00387 374 485 6.6E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 Gene3D G3DSA:1.10.287.130 256 315 2.5E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 Pfam PF00672 HAMP domain 191 259 5.9E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 1.0E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 1.0E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 1.0E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 SUPERFAMILY SSF47384 247 328 1.39E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 482 2.2E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 SMART SM00304 211 263 9.2E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 PANTHER PTHR24423 152 165 6.0E-97 T 23-04-2016 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 PANTHER PTHR24423 205 483 6.0E-97 T 23-04-2016 CYCME_RS05620 1e5a471cf69eaded9e8727accf7734fc 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 328 2.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CYCME_RS01135 81122160bcb34df9b7117e888c1a9ca6 400 Pfam PF00487 Fatty acid desaturase 129 336 1.2E-23 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 CYCME_RS01135 81122160bcb34df9b7117e888c1a9ca6 400 PANTHER PTHR38674:SF1 26 399 1.0E-71 T 23-04-2016 CYCME_RS01135 81122160bcb34df9b7117e888c1a9ca6 400 PANTHER PTHR38674 26 399 1.0E-71 T 23-04-2016 CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 PANTHER PTHR24322 155 187 1.2E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 PANTHER PTHR24322 8 139 1.2E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 248 1.7E-80 T 23-04-2016 CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 Gene3D G3DSA:3.40.50.720 3 197 8.0E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 SUPERFAMILY SSF51735 2 250 1.13E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 PIRSF PIRSF000094 1 252 7.6E-93 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 PANTHER PTHR24322:SF317 155 187 1.2E-50 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS06285 c3ce30be04e0fc5fca945917ede3d693 252 PANTHER PTHR24322:SF317 8 139 1.2E-50 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 Gene3D G3DSA:3.10.180.10 1 147 2.5E-32 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 PANTHER PTHR21366 197 299 1.7E-13 T 23-04-2016 CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 PANTHER PTHR21366 3 74 1.7E-13 T 23-04-2016 CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 Gene3D G3DSA:3.10.180.10 148 302 4.5E-45 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 PANTHER PTHR21366:SF10 197 299 1.7E-13 T 23-04-2016 CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 PANTHER PTHR21366:SF10 3 74 1.7E-13 T 23-04-2016 CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 271 2.2E-19 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 SUPERFAMILY SSF54593 1 281 1.22E-42 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS10280 d7c0a053171bc19723563ec6b194b0bc 314 TIGRFAM TIGR03211 catechol_2_3: catechol 2,3 dioxygenase 2 314 1.1E-130 T 23-04-2016 IPR017624 Catechol 2,3 dioxygenase GO:0008198|GO:0018577|GO:0019439|GO:0055114 KEGG: 00361+1.13.11.2|KEGG: 00362+1.13.11.2|KEGG: 00622+1.13.11.2|KEGG: 00643+1.13.11.2|MetaCyc: PWY-5419|MetaCyc: PWY-5641 CYCME_RS01380 3e9fcdb61803fac6c6f33d943ca6591c 189 SUPERFAMILY SSF53335 17 162 1.16E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS01380 3e9fcdb61803fac6c6f33d943ca6591c 189 Gene3D G3DSA:3.40.50.150 15 160 1.4E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS01380 3e9fcdb61803fac6c6f33d943ca6591c 189 PANTHER PTHR35276 9 187 3.7E-36 T 23-04-2016 CYCME_RS01380 3e9fcdb61803fac6c6f33d943ca6591c 189 PANTHER PTHR35276:SF1 9 187 3.7E-36 T 23-04-2016 CYCME_RS01380 3e9fcdb61803fac6c6f33d943ca6591c 189 Pfam PF06962 Putative rRNA methylase 47 187 2.0E-44 T 23-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CYCME_RS00770 aa4499a7f5e1e3f0ad3124ca7fbf7d2e 163 SMART SM00769 33 154 6.6E-9 T 23-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 CYCME_RS00770 aa4499a7f5e1e3f0ad3124ca7fbf7d2e 163 Gene3D G3DSA:2.60.40.10 38 113 4.2E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold CYCME_RS00770 aa4499a7f5e1e3f0ad3124ca7fbf7d2e 163 SUPERFAMILY SSF117070 12 157 7.06E-22 T 23-04-2016 CYCME_RS00770 aa4499a7f5e1e3f0ad3124ca7fbf7d2e 163 Pfam PF03168 Late embryogenesis abundant protein 53 136 2.8E-13 T 23-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 CYCME_RS04360 bb0ac5f78165ed4cc0f584a56ccb1d88 184 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 179 1.3E-53 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CYCME_RS04360 bb0ac5f78165ed4cc0f584a56ccb1d88 184 PANTHER PTHR14269 3 181 5.7E-71 T 23-04-2016 CYCME_RS04360 bb0ac5f78165ed4cc0f584a56ccb1d88 184 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CYCME_RS04360 bb0ac5f78165ed4cc0f584a56ccb1d88 184 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 7.8E-18 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CYCME_RS04360 bb0ac5f78165ed4cc0f584a56ccb1d88 184 PIRSF PIRSF000847 1 184 1.1E-44 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CYCME_RS04360 bb0ac5f78165ed4cc0f584a56ccb1d88 184 PANTHER PTHR14269:SF13 3 181 5.7E-71 T 23-04-2016 CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 PANTHER PTHR23152 2 938 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 SUPERFAMILY SSF52518 582 799 3.43E-52 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 Gene3D G3DSA:3.40.50.970 599 801 1.1E-24 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 PIRSF PIRSF000157 1 939 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 Gene3D G3DSA:3.40.50.970 163 521 1.1E-67 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 937 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 Pfam PF02779 Transketolase, pyrimidine binding domain 599 793 6.0E-66 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 Pfam PF00676 Dehydrogenase E1 component 216 519 1.6E-49 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 SMART SM00861 599 792 5.3E-57 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 SUPERFAMILY SSF52518 123 550 5.89E-79 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 5.0E-16 T 23-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 PANTHER PTHR23152:SF4 2 938 0.0 T 23-04-2016 CYCME_RS05135 d8b4296c4d65b81c8828d252c06860ee 939 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 796 938 3.3E-51 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CYCME_RS12780 7a007088dc7c576d5230c7c95027874d 78 PANTHER PTHR21588 10 78 2.1E-13 T 23-04-2016 CYCME_RS12780 7a007088dc7c576d5230c7c95027874d 78 PANTHER PTHR21588:SF5 10 78 2.1E-13 T 23-04-2016 CYCME_RS12780 7a007088dc7c576d5230c7c95027874d 78 Gene3D G3DSA:2.130.10.10 11 70 1.4E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 SMART SM00382 140 325 7.6E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 SUPERFAMILY SSF50615 2 72 4.71E-24 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 456 1.3E-251 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 PANTHER PTHR15184:SF44 1 460 0.0 T 23-04-2016 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 4.9E-19 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 8.0E-63 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 SUPERFAMILY SSF47917 343 457 3.4E-53 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 55.579 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 SUPERFAMILY SSF52540 75 346 4.26E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 PANTHER PTHR15184 1 460 0.0 T 23-04-2016 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 Gene3D G3DSA:3.40.50.300 74 341 1.8E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 Gene3D G3DSA:2.40.10.170 2 72 8.1E-27 T 23-04-2016 CYCME_RS12285 5bf0a13f92f40404c519b4529805c45c 460 Gene3D G3DSA:1.10.1140.10 343 458 1.2E-55 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CYCME_RS01710 537d325bef4cd4ca3ba0b09fdc747f08 351 Gene3D G3DSA:3.30.565.10 206 293 5.1E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CYCME_RS01710 537d325bef4cd4ca3ba0b09fdc747f08 351 PANTHER PTHR34220 138 350 3.7E-56 T 23-04-2016 CYCME_RS01710 537d325bef4cd4ca3ba0b09fdc747f08 351 Pfam PF06580 Histidine kinase 158 236 1.5E-24 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CYCME_RS01710 537d325bef4cd4ca3ba0b09fdc747f08 351 PANTHER PTHR34220:SF3 138 350 3.7E-56 T 23-04-2016 CYCME_RS02280 67152306de93cc05a5b4a7618332b53c 297 PANTHER PTHR22572 5 277 2.4E-96 T 23-04-2016 CYCME_RS02280 67152306de93cc05a5b4a7618332b53c 297 PANTHER PTHR22572:SF118 5 277 2.4E-96 T 23-04-2016 CYCME_RS02280 67152306de93cc05a5b4a7618332b53c 297 Gene3D G3DSA:3.90.550.10 4 278 1.0E-60 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS02280 67152306de93cc05a5b4a7618332b53c 297 Pfam PF00483 Nucleotidyl transferase 5 273 1.5E-27 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CYCME_RS02280 67152306de93cc05a5b4a7618332b53c 297 SUPERFAMILY SSF53448 3 280 5.18E-57 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS02280 67152306de93cc05a5b4a7618332b53c 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 270 8.8E-102 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 Pfam PF01016 Ribosomal L27 protein 2 81 9.6E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-15 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 3.1E-41 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 Gene3D G3DSA:2.40.50.100 20 80 1.7E-31 T 23-04-2016 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 SUPERFAMILY SSF110324 2 80 1.26E-34 T 23-04-2016 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 PANTHER PTHR15893 1 83 4.8E-50 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.6E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.6E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.6E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09935 56a4484cc927963a57a2e75c69741749 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.332 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS08145 6cfd05d92b4ed43bbd6df1f947c4fc02 260 Gene3D G3DSA:3.40.50.150 30 246 1.4E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS08145 6cfd05d92b4ed43bbd6df1f947c4fc02 260 Pfam PF08241 Methyltransferase domain 44 140 2.4E-24 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CYCME_RS08145 6cfd05d92b4ed43bbd6df1f947c4fc02 260 PANTHER PTHR10108 30 245 1.2E-37 T 23-04-2016 CYCME_RS08145 6cfd05d92b4ed43bbd6df1f947c4fc02 260 SUPERFAMILY SSF53335 29 248 1.7E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS10260 2ab84e6c634521e3001040210840b2ac 510 Gene3D G3DSA:1.10.620.20 3 492 1.0E-185 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CYCME_RS10260 2ab84e6c634521e3001040210840b2ac 510 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 21 248 3.8E-67 T 23-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CYCME_RS10260 2ab84e6c634521e3001040210840b2ac 510 SUPERFAMILY SSF47240 4 497 1.77E-152 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS10260 2ab84e6c634521e3001040210840b2ac 510 Pfam PF04945 YHS domain 411 450 1.6E-14 T 23-04-2016 IPR007029 YHS domain CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 PANTHER PTHR32268 1 376 1.4E-173 T 23-04-2016 CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 PANTHER PTHR32268:SF11 1 376 1.4E-173 T 23-04-2016 CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 7 374 47.661 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 Pfam PF00561 alpha/beta hydrolase fold 50 360 4.5E-31 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 20 367 5.3E-136 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 PIRSF PIRSF000443 1 379 6.4E-137 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 Gene3D G3DSA:3.40.50.1820 240 368 1.9E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 Gene3D G3DSA:3.40.50.1820 22 207 1.9E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS00215 204087c05edfc81179ff46b80eecb52f 379 SUPERFAMILY SSF53474 12 372 1.03E-100 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 SMART SM00357 3 66 1.0E-28 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 SUPERFAMILY SSF50249 1 65 7.71E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 Gene3D G3DSA:2.40.50.140 1 65 2.4E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 PANTHER PTHR11544 1 66 6.7E-42 T 23-04-2016 CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 PIRSF PIRSF002599 1 66 2.6E-26 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site CYCME_RS09730 845fb95125dd6726c7ee9f1a7f5b532d 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.9E-33 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CYCME_RS06585 2150f40c28b32693fb191df843404194 412 PANTHER PTHR30097:SF4 39 406 7.2E-64 T 23-04-2016 CYCME_RS06585 2150f40c28b32693fb191df843404194 412 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 102 325 9.5E-36 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CYCME_RS06585 2150f40c28b32693fb191df843404194 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 113 400 2.8E-33 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS06585 2150f40c28b32693fb191df843404194 412 PANTHER PTHR30097 39 406 7.2E-64 T 23-04-2016 CYCME_RS06585 2150f40c28b32693fb191df843404194 412 SUPERFAMILY SSF111369 112 330 3.66E-16 T 23-04-2016 CYCME_RS06585 2150f40c28b32693fb191df843404194 412 Gene3D G3DSA:2.40.50.100 123 150 6.4E-8 T 23-04-2016 CYCME_RS06585 2150f40c28b32693fb191df843404194 412 Gene3D G3DSA:2.40.50.100 222 253 6.4E-8 T 23-04-2016 CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 SMART SM00267 271 445 8.6E-61 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 Pfam PF00989 PAS fold 142 183 1.5E-5 T 23-04-2016 IPR013767 PAS fold GO:0006355 CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 Gene3D G3DSA:3.30.450.20 10 141 1.7E-13 T 23-04-2016 CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 Gene3D G3DSA:3.30.450.20 142 282 1.6E-14 T 23-04-2016 CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 SMART SM00091 6 73 0.018 T 23-04-2016 IPR000014 PAS domain CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 SMART SM00091 140 207 0.0026 T 23-04-2016 IPR000014 PAS domain CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 282 443 3.3E-53 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 278 444 8.3E-53 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 Pfam PF13426 PAS domain 20 134 6.4E-9 T 23-04-2016 IPR000014 PAS domain CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 SUPERFAMILY SSF55785 131 263 9.25E-10 T 23-04-2016 IPR000014 PAS domain CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 PANTHER PTHR10799 315 444 1.0E-27 T 23-04-2016 CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 SUPERFAMILY SSF55785 20 142 1.57E-10 T 23-04-2016 IPR000014 PAS domain CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 Gene3D G3DSA:3.30.70.270 284 444 9.6E-52 T 23-04-2016 CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 SUPERFAMILY SSF55073 287 444 2.12E-48 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS10020 64889c40d1791f208f6395b12ed23315 445 PANTHER PTHR10799:SF728 315 444 1.0E-27 T 23-04-2016 CYCME_RS08360 d15371f83adc71358f70070e389a7130 233 SUPERFAMILY SSF52833 95 232 8.83E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS08360 d15371f83adc71358f70070e389a7130 233 Pfam PF13098 Thioredoxin-like domain 108 231 1.2E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS08360 d15371f83adc71358f70070e389a7130 233 Gene3D G3DSA:3.40.30.10 103 231 2.3E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS08360 d15371f83adc71358f70070e389a7130 233 SUPERFAMILY SSF54423 34 80 3.14E-11 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CYCME_RS08360 d15371f83adc71358f70070e389a7130 233 PANTHER PTHR35272:SF3 34 231 2.1E-69 T 23-04-2016 CYCME_RS08360 d15371f83adc71358f70070e389a7130 233 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 77 6.6E-16 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CYCME_RS08360 d15371f83adc71358f70070e389a7130 233 Gene3D G3DSA:3.10.450.70 21 83 6.2E-17 T 23-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal CYCME_RS08360 d15371f83adc71358f70070e389a7130 233 PANTHER PTHR35272 34 231 2.1E-69 T 23-04-2016 CYCME_RS04165 3be29acb1b38b0bcecb43a0bc93acda7 156 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 9 70 1.3E-30 T 23-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 CYCME_RS04165 3be29acb1b38b0bcecb43a0bc93acda7 156 Gene3D G3DSA:1.10.720.30 17 74 3.3E-28 T 23-04-2016 IPR003034 SAP domain CYCME_RS06335 dbb79f4f1fca096063c929f63e6a149d 809 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 111 808 3.4E-260 T 23-04-2016 IPR010706 Fatty acid cis-trans isomerase CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 SUPERFAMILY SSF55347 152 314 5.66E-65 T 23-04-2016 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 SUPERFAMILY SSF51735 1 179 5.84E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 2.2E-29 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.2E-29 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 2.2E-29 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.2E-29 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 2.2E-29 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 3.2E-47 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 Gene3D G3DSA:3.30.360.10 161 315 1.3E-68 T 23-04-2016 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 SMART SM00846 3 152 1.2E-66 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.1E-117 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 PANTHER PTHR10836 1 338 1.8E-217 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 Gene3D G3DSA:3.40.50.720 1 160 2.2E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 PIRSF PIRSF000149 1 335 2.2E-118 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 6.1E-61 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS05520 7567adb4fffea2bd77a8a861e516336e 338 PANTHER PTHR10836:SF37 1 338 1.8E-217 T 23-04-2016 CYCME_RS05335 3c50a2f6d500ec8ffb73a43f4eb5af35 301 SUPERFAMILY SSF52540 2 222 1.55E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05335 3c50a2f6d500ec8ffb73a43f4eb5af35 301 SMART SM00382 26 209 2.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS05335 3c50a2f6d500ec8ffb73a43f4eb5af35 301 PANTHER PTHR24220 3 225 7.0E-92 T 23-04-2016 CYCME_RS05335 3c50a2f6d500ec8ffb73a43f4eb5af35 301 Gene3D G3DSA:3.40.50.300 2 231 2.8E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05335 3c50a2f6d500ec8ffb73a43f4eb5af35 301 Pfam PF00005 ABC transporter 18 160 5.4E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS05335 3c50a2f6d500ec8ffb73a43f4eb5af35 301 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS10095 a5598753eedaa75a9aa080fb2648b2bd 350 PIRSF PIRSF006268 5 343 4.1E-95 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 CYCME_RS10095 a5598753eedaa75a9aa080fb2648b2bd 350 PANTHER PTHR30040 2 349 2.4E-136 T 23-04-2016 CYCME_RS10095 a5598753eedaa75a9aa080fb2648b2bd 350 SUPERFAMILY SSF143631 35 341 3.53E-95 T 23-04-2016 IPR003374 ApbE-like domain CYCME_RS10095 a5598753eedaa75a9aa080fb2648b2bd 350 PANTHER PTHR30040:SF3 2 349 2.4E-136 T 23-04-2016 CYCME_RS10095 a5598753eedaa75a9aa080fb2648b2bd 350 Pfam PF02424 ApbE family 42 323 1.2E-83 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 SUPERFAMILY SSF53901 214 411 3.91E-74 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 PANTHER PTHR11712 3 411 6.5E-216 T 23-04-2016 CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.5E-58 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 PIRSF PIRSF000447 1 412 1.5E-190 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 4.2E-196 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 368 1.1E-37 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 SMART SM00825 Beta-ketoacyl synthase 6 412 4.5E-16 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 Gene3D G3DSA:3.40.47.10 263 411 6.1E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 Gene3D G3DSA:3.40.47.10 2 260 7.5E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS05395 704e856907ed78e57c0e7ffd5f1f7bfb 412 SUPERFAMILY SSF53901 3 252 8.35E-77 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS06840 d1c686c7dd036a11b55d577b2ee18351 507 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 13 265 1.2E-59 T 23-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CYCME_RS06840 d1c686c7dd036a11b55d577b2ee18351 507 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 336 505 3.8E-36 T 23-04-2016 IPR014263 Methanolan biosynthesis EpsI CYCME_RS06840 d1c686c7dd036a11b55d577b2ee18351 507 Pfam PF11984 Protein of unknown function (DUF3485) 308 504 1.4E-50 T 23-04-2016 IPR014263 Methanolan biosynthesis EpsI CYCME_RS06840 d1c686c7dd036a11b55d577b2ee18351 507 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 172 267 4.6E-23 T 23-04-2016 IPR026392 Exosortase/Archaeosortase domain CYCME_RS06840 d1c686c7dd036a11b55d577b2ee18351 507 TIGRFAM TIGR02602 8TM_EpsH: exosortase 29 263 2.3E-49 T 23-04-2016 IPR013426 Exosortase, EpsH CYCME_RS06840 d1c686c7dd036a11b55d577b2ee18351 507 TIGRFAM TIGR04152 exosort_VPLPA: exosortase D, VPLPA-CTERM-specific 29 505 1.8E-172 T 23-04-2016 IPR026491 Exosortase D, VPLPA-CTERM-specific CYCME_RS06315 c6bc67b296953df982f8478349fc1a75 282 SUPERFAMILY SSF103481 27 126 3.92E-16 T 23-04-2016 CYCME_RS06315 c6bc67b296953df982f8478349fc1a75 282 PANTHER PTHR32322 1 274 7.3E-42 T 23-04-2016 CYCME_RS06315 c6bc67b296953df982f8478349fc1a75 282 PANTHER PTHR32322:SF9 1 274 7.3E-42 T 23-04-2016 CYCME_RS06315 c6bc67b296953df982f8478349fc1a75 282 SUPERFAMILY SSF103481 174 277 1.31E-12 T 23-04-2016 CYCME_RS06315 c6bc67b296953df982f8478349fc1a75 282 Pfam PF00892 EamA-like transporter family 139 273 1.5E-19 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS06315 c6bc67b296953df982f8478349fc1a75 282 Pfam PF00892 EamA-like transporter family 1 125 2.4E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS10690 2f810b76f9257fa3f697b140d6ce1c0a 322 PANTHER PTHR19372 70 310 7.1E-137 T 23-04-2016 CYCME_RS10690 2f810b76f9257fa3f697b140d6ce1c0a 322 SUPERFAMILY SSF56524 65 318 6.8E-91 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CYCME_RS10690 2f810b76f9257fa3f697b140d6ce1c0a 322 PANTHER PTHR19372:SF1 70 310 7.1E-137 T 23-04-2016 CYCME_RS10690 2f810b76f9257fa3f697b140d6ce1c0a 322 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 5 322 57.079 T 23-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CYCME_RS10690 2f810b76f9257fa3f697b140d6ce1c0a 322 Pfam PF00174 Oxidoreductase molybdopterin binding domain 102 257 1.5E-26 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CYCME_RS10690 2f810b76f9257fa3f697b140d6ce1c0a 322 Gene3D G3DSA:3.90.420.10 69 318 1.8E-67 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CYCME_RS09420 e9d6b86c22d8b201538933d88e578c97 431 Gene3D G3DSA:3.40.50.150 139 415 3.4E-95 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS09420 e9d6b86c22d8b201538933d88e578c97 431 PIRSF PIRSF003085 25 430 1.6E-123 T 23-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CYCME_RS09420 e9d6b86c22d8b201538933d88e578c97 431 PANTHER PTHR10108 73 331 4.0E-110 T 23-04-2016 CYCME_RS09420 e9d6b86c22d8b201538933d88e578c97 431 PANTHER PTHR10108 349 431 4.0E-110 T 23-04-2016 CYCME_RS09420 e9d6b86c22d8b201538933d88e578c97 431 Pfam PF02353 Mycolic acid cyclopropane synthetase 145 413 1.6E-85 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS09420 e9d6b86c22d8b201538933d88e578c97 431 PANTHER PTHR10108:SF795 73 331 4.0E-110 T 23-04-2016 CYCME_RS09420 e9d6b86c22d8b201538933d88e578c97 431 PANTHER PTHR10108:SF795 349 431 4.0E-110 T 23-04-2016 CYCME_RS09420 e9d6b86c22d8b201538933d88e578c97 431 SUPERFAMILY SSF53335 31 370 4.75E-92 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS00315 649640aeef0175c4ef1e991b86522dc0 484 Pfam PF13401 AAA domain 34 141 1.5E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS00315 649640aeef0175c4ef1e991b86522dc0 484 Pfam PF05036 Sporulation related domain 397 472 1.6E-7 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS00315 649640aeef0175c4ef1e991b86522dc0 484 Gene3D G3DSA:3.40.50.300 29 180 1.4E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00315 649640aeef0175c4ef1e991b86522dc0 484 SUPERFAMILY SSF52540 20 223 9.61E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01010 ab4bf4ad85c0b9221ca5a65bba034a2d 185 Pfam PF03992 Antibiotic biosynthesis monooxygenase 9 82 7.6E-7 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain CYCME_RS01010 ab4bf4ad85c0b9221ca5a65bba034a2d 185 Gene3D G3DSA:3.30.70.900 9 88 3.9E-12 T 23-04-2016 CYCME_RS01010 ab4bf4ad85c0b9221ca5a65bba034a2d 185 PANTHER PTHR40057:SF1 8 185 5.2E-31 T 23-04-2016 CYCME_RS01010 ab4bf4ad85c0b9221ca5a65bba034a2d 185 PANTHER PTHR40057 8 185 5.2E-31 T 23-04-2016 CYCME_RS01010 ab4bf4ad85c0b9221ca5a65bba034a2d 185 SUPERFAMILY SSF54909 9 88 1.07E-13 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 Gene3D G3DSA:3.30.360.10 301 459 2.2E-55 T 23-04-2016 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 8.2E-21 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 251 264 8.2E-21 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 8.2E-21 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 411 426 8.2E-21 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 8.2E-21 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 SUPERFAMILY SSF55347 292 455 8.42E-53 T 23-04-2016 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 SUPERFAMILY SSF51735 133 307 5.19E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 PANTHER PTHR10836 120 479 2.2E-215 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 134 466 1.9E-112 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 SMART SM00846 132 292 5.3E-47 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 Gene3D G3DSA:3.40.50.720 133 300 2.0E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 3.3E-47 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 PANTHER PTHR10836:SF35 120 479 2.2E-215 T 23-04-2016 CYCME_RS09950 9ee368ac11cf5110c8c65e89e387b659 481 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 133 292 5.3E-38 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 Gene3D G3DSA:3.40.50.2020 271 443 7.2E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 PANTHER PTHR11907:SF4 1 478 3.1E-262 T 23-04-2016 CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 PANTHER PTHR11907 1 478 3.1E-262 T 23-04-2016 CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 SUPERFAMILY SSF53271 250 478 1.44E-70 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 Pfam PF13522 Glutamine amidotransferase domain 64 208 6.3E-17 T 23-04-2016 CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 Gene3D G3DSA:3.60.20.10 2 257 1.5E-64 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 PIRSF PIRSF000485 1 478 2.2E-162 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 3.8E-157 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 SUPERFAMILY SSF56235 2 257 4.37E-73 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 43.897 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CYCME_RS07320 32d5a3fca42bd79b1c086e98762a94d8 502 Pfam PF00156 Phosphoribosyl transferase domain 278 393 2.6E-7 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 246 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 SUPERFAMILY SSF51735 4 161 1.09E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.0E-81 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 PANTHER PTHR11645 1 275 9.6E-108 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 PANTHER PTHR11645:SF0 1 275 9.6E-108 T 23-04-2016 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 268 5.1E-33 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 SUPERFAMILY SSF48179 163 271 4.42E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 Gene3D G3DSA:3.40.50.720 2 161 3.7E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 PIRSF PIRSF000193 3 271 6.3E-79 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 Gene3D G3DSA:1.10.3730.10 163 268 8.8E-35 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 1.1E-20 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CYCME_RS00385 8c0b869ec6480d568853afa6784d5f6f 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 27.085 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 SMART SM00363 30 94 0.002 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 Gene3D G3DSA:3.10.290.10 29 77 6.9E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 SUPERFAMILY SSF55120 89 324 4.52E-76 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 146 160 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 323 2.9E-91 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 Pfam PF00849 RNA pseudouridylate synthase 104 253 1.6E-33 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 SUPERFAMILY SSF55174 27 116 8.58E-8 T 23-04-2016 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 PANTHER PTHR11079:SF73 9 328 1.4E-128 T 23-04-2016 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 PANTHER PTHR11079 9 328 1.4E-128 T 23-04-2016 CYCME_RS11520 4b33d1d32feeb39fa3d5108060f0cedc 330 Pfam PF01479 S4 domain 31 75 1.5E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 Gene3D G3DSA:3.30.70.20 269 320 8.4E-8 T 23-04-2016 CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 SUPERFAMILY SSF54862 93 115 2.51E-31 T 23-04-2016 CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 SUPERFAMILY SSF54862 161 323 2.51E-31 T 23-04-2016 CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 PANTHER PTHR24960:SF45 1 381 4.2E-140 T 23-04-2016 CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 Gene3D G3DSA:2.60.40.10 343 459 2.5E-31 T 23-04-2016 IPR013783 Immunoglobulin-like fold CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 260 271 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 Pfam PF13746 4Fe-4S dicluster domain 207 312 6.3E-43 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 PANTHER PTHR24960 1 381 4.2E-140 T 23-04-2016 CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 Pfam PF12801 4Fe-4S binding domain 84 125 2.1E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 343 459 1.6E-28 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 29 458 6.0E-166 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 CYCME_RS08955 0190c368d5ed131c5c7d8d5ed44b46f1 462 Gene3D G3DSA:1.10.1060.10 211 268 1.6E-8 T 23-04-2016 CYCME_RS07365 83e58b45a33aaa58e809d23b1cd6ea22 246 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 8 240 1.3E-102 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CYCME_RS07365 83e58b45a33aaa58e809d23b1cd6ea22 246 PANTHER PTHR30456:SF0 4 246 2.4E-134 T 23-04-2016 CYCME_RS07365 83e58b45a33aaa58e809d23b1cd6ea22 246 SUPERFAMILY SSF63892 6 243 8.37E-98 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CYCME_RS07365 83e58b45a33aaa58e809d23b1cd6ea22 246 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 245 120.53 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CYCME_RS07365 83e58b45a33aaa58e809d23b1cd6ea22 246 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 8 241 4.9E-98 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CYCME_RS07365 83e58b45a33aaa58e809d23b1cd6ea22 246 PANTHER PTHR30456 4 246 2.4E-134 T 23-04-2016 CYCME_RS07365 83e58b45a33aaa58e809d23b1cd6ea22 246 Gene3D G3DSA:3.20.20.70 6 244 1.4E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS07525 252dc73a99624672b3c8ba3d4be2327f 99 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 95 2.1E-26 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS07525 252dc73a99624672b3c8ba3d4be2327f 99 Gene3D G3DSA:3.30.1360.20 13 96 1.0E-29 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS07525 252dc73a99624672b3c8ba3d4be2327f 99 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 98 21.611 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS07525 252dc73a99624672b3c8ba3d4be2327f 99 PANTHER PTHR12599 15 95 7.7E-32 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS07525 252dc73a99624672b3c8ba3d4be2327f 99 SUPERFAMILY SSF55248 15 95 3.53E-29 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 SMART SM00480 17 362 6.1E-121 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 PANTHER PTHR30478 2 366 2.7E-120 T 23-04-2016 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 365 3.7E-102 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 SUPERFAMILY SSF55979 245 366 7.18E-37 T 23-04-2016 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 Gene3D G3DSA:3.10.150.10 248 366 4.0E-38 T 23-04-2016 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 SUPERFAMILY SSF55979 126 244 1.07E-23 T 23-04-2016 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 PIRSF PIRSF000804 1 366 3.3E-114 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 SUPERFAMILY SSF55979 1 118 4.32E-28 T 23-04-2016 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 365 3.1E-36 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.2E-31 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 4.1E-33 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 Gene3D G3DSA:3.10.150.10 126 247 1.1E-31 T 23-04-2016 CYCME_RS00010 288ac69c17dc4435d8aaa727e57c3d04 366 Gene3D G3DSA:3.10.150.10 1 117 6.1E-29 T 23-04-2016 CYCME_RS03070 8ae6a88bf02e5f4594365c2a0dd9c4b7 237 PANTHER PTHR11907:SF9 20 236 2.3E-52 T 23-04-2016 CYCME_RS03070 8ae6a88bf02e5f4594365c2a0dd9c4b7 237 Gene3D G3DSA:3.40.50.2020 83 236 2.3E-25 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS03070 8ae6a88bf02e5f4594365c2a0dd9c4b7 237 PANTHER PTHR11907 20 236 2.3E-52 T 23-04-2016 CYCME_RS03070 8ae6a88bf02e5f4594365c2a0dd9c4b7 237 Pfam PF00156 Phosphoribosyl transferase domain 146 234 3.0E-6 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CYCME_RS03070 8ae6a88bf02e5f4594365c2a0dd9c4b7 237 SUPERFAMILY SSF53271 66 235 1.48E-30 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 Hamap MF_00422 Protein translocase subunit SecE [secE]. 80 135 11.462 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 PANTHER PTHR33910 15 138 1.6E-22 T 23-04-2016 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 84 136 5.4E-15 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 83 136 7.7E-19 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 PANTHER PTHR33910:SF1 15 138 1.6E-22 T 23-04-2016 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 85 113 - T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 Gene3D G3DSA:1.20.5.1030 79 137 1.5E-22 T 23-04-2016 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 PRINTS PR01650 Bacterial translocase SecE signature 79 99 4.1E-20 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 PRINTS PR01650 Bacterial translocase SecE signature 123 138 4.1E-20 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 PRINTS PR01650 Bacterial translocase SecE signature 103 123 4.1E-20 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CYCME_RS03590 7c5c6f89d4f4e24c9ddd16680545fcb3 138 PRINTS PR01650 Bacterial translocase SecE signature 58 79 4.1E-20 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CYCME_RS01685 019b620cb8698b70c468add66eafbea7 362 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 340 8.9E-80 T 23-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 CYCME_RS01685 019b620cb8698b70c468add66eafbea7 362 Pfam PF07219 HemY protein N-terminus 2 88 3.4E-22 T 23-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 CYCME_RS01685 019b620cb8698b70c468add66eafbea7 362 Pfam PF13432 Tetratricopeptide repeat 113 160 8.9E-4 T 23-04-2016 CYCME_RS01685 019b620cb8698b70c468add66eafbea7 362 SUPERFAMILY SSF48452 282 346 2.24E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS01685 019b620cb8698b70c468add66eafbea7 362 SUPERFAMILY SSF48452 215 255 2.24E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS01685 019b620cb8698b70c468add66eafbea7 362 SUPERFAMILY SSF48452 44 178 8.28E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS01685 019b620cb8698b70c468add66eafbea7 362 SUPERFAMILY SSF48452 265 315 8.28E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS01685 019b620cb8698b70c468add66eafbea7 362 Gene3D G3DSA:1.25.40.10 39 346 5.3E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS03175 3cfd47f1d1dcc5e177e622ceada06842 193 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 6 190 6.9E-56 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS03175 3cfd47f1d1dcc5e177e622ceada06842 193 Gene3D G3DSA:3.40.50.150 6 190 4.1E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS03175 3cfd47f1d1dcc5e177e622ceada06842 193 Pfam PF03602 Conserved hypothetical protein 95 8 187 1.3E-60 T 23-04-2016 CYCME_RS03175 3cfd47f1d1dcc5e177e622ceada06842 193 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CYCME_RS03175 3cfd47f1d1dcc5e177e622ceada06842 193 PANTHER PTHR18895 8 193 1.6E-41 T 23-04-2016 CYCME_RS03175 3cfd47f1d1dcc5e177e622ceada06842 193 PIRSF PIRSF004553 7 191 3.6E-55 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CYCME_RS03175 3cfd47f1d1dcc5e177e622ceada06842 193 PANTHER PTHR18895:SF60 8 193 1.6E-41 T 23-04-2016 CYCME_RS03175 3cfd47f1d1dcc5e177e622ceada06842 193 SUPERFAMILY SSF53335 8 188 9.1E-49 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS11010 820a55641c339bb6f14671976650c367 78 Gene3D G3DSA:3.40.50.720 2 30 7.8E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11010 820a55641c339bb6f14671976650c367 78 SUPERFAMILY SSF51735 1 36 3.17E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 SUPERFAMILY SSF51569 15 283 2.75E-67 T 23-04-2016 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 Gene3D G3DSA:3.20.20.70 15 274 1.9E-55 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 Gene3D G3DSA:1.10.8.60 286 349 4.5E-33 T 23-04-2016 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 PANTHER PTHR10277:SF3 1 275 1.6E-92 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 PANTHER PTHR10277 1 275 1.6E-92 T 23-04-2016 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 SUPERFAMILY SSF89000 299 348 1.77E-17 T 23-04-2016 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 Pfam PF00682 HMGL-like 16 274 2.2E-58 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 353 189.541 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 284 345 9.0E-27 T 23-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 Pfam PF07836 DmpG-like communication domain 285 346 1.2E-31 T 23-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS04760 c2950632a2aa69f2bba3b310c5227de2 356 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 15 348 7.4E-161 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 PANTHER PTHR10992 6 233 4.7E-41 T 23-04-2016 CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 Gene3D G3DSA:3.40.50.1820 5 232 7.6E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 PRINTS PR00111 Alpha/beta hydrolase fold signature 177 191 1.0E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 PRINTS PR00111 Alpha/beta hydrolase fold signature 16 31 1.0E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 PRINTS PR00412 Epoxide hydrolase signature 208 230 1.1E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 PRINTS PR00412 Epoxide hydrolase signature 175 191 1.1E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 PRINTS PR00412 Epoxide hydrolase signature 16 31 1.1E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 Pfam PF00561 alpha/beta hydrolase fold 6 220 2.7E-19 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03085 cbfb31db7144e0f423ef88e02cc773cf 238 SUPERFAMILY SSF53474 4 231 8.92E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS01555 081ad17dec25dd1bb905938a997a06ff 479 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 462 1.9E-102 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CYCME_RS01555 081ad17dec25dd1bb905938a997a06ff 479 Pfam PF02386 Cation transport protein 36 295 1.3E-51 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CYCME_RS01555 081ad17dec25dd1bb905938a997a06ff 479 Pfam PF02386 Cation transport protein 303 473 6.0E-34 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CYCME_RS01555 081ad17dec25dd1bb905938a997a06ff 479 PIRSF PIRSF006247 1 479 3.9E-174 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CYCME_RS01555 081ad17dec25dd1bb905938a997a06ff 479 PANTHER PTHR32024 1 479 4.2E-217 T 23-04-2016 CYCME_RS01555 081ad17dec25dd1bb905938a997a06ff 479 PANTHER PTHR32024:SF2 1 479 4.2E-217 T 23-04-2016 CYCME_RS01600 bb9b640442b8bdf91f9972cbac5ab16d 386 Gene3D G3DSA:3.40.50.450 129 303 1.2E-13 T 23-04-2016 CYCME_RS01600 bb9b640442b8bdf91f9972cbac5ab16d 386 SUPERFAMILY SSF47781 20 75 3.34E-7 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CYCME_RS01600 bb9b640442b8bdf91f9972cbac5ab16d 386 SUPERFAMILY SSF102405 96 302 3.05E-48 T 23-04-2016 CYCME_RS01600 bb9b640442b8bdf91f9972cbac5ab16d 386 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 84 302 2.0E-77 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 CYCME_RS01600 bb9b640442b8bdf91f9972cbac5ab16d 386 PANTHER PTHR32039:SF8 25 382 2.9E-113 T 23-04-2016 CYCME_RS01600 bb9b640442b8bdf91f9972cbac5ab16d 386 PANTHER PTHR32039 25 382 2.9E-113 T 23-04-2016 CYCME_RS01600 bb9b640442b8bdf91f9972cbac5ab16d 386 Gene3D G3DSA:1.10.150.20 27 74 3.9E-6 T 23-04-2016 CYCME_RS01600 bb9b640442b8bdf91f9972cbac5ab16d 386 Pfam PF02481 DNA recombination-mediator protein A 87 293 9.3E-77 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.5E-36 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.5E-20 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.5E-20 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.5E-20 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 PANTHER PTHR33175 1 90 1.0E-45 T 23-04-2016 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 Gene3D G3DSA:4.10.520.10 1 90 1.3E-39 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 SMART SM00411 1 90 3.5E-47 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CYCME_RS08075 56f9198f4b0630068c54f274b80eeba2 90 SUPERFAMILY SSF47729 1 90 5.89E-34 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CYCME_RS07075 7ec610ad33e49ddc655f6df7679bb5dd 453 PANTHER PTHR30250 1 439 1.0E-51 T 23-04-2016 CYCME_RS07075 7ec610ad33e49ddc655f6df7679bb5dd 453 Pfam PF13440 Polysaccharide biosynthesis protein 33 337 1.0E-47 T 23-04-2016 CYCME_RS07075 7ec610ad33e49ddc655f6df7679bb5dd 453 PANTHER PTHR30250:SF0 1 439 1.0E-51 T 23-04-2016 CYCME_RS08620 7d3dc1da45e74e031a1e7b7b2d2100a1 269 Pfam PF01226 Formate/nitrite transporter 8 258 1.2E-64 T 23-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CYCME_RS08620 7d3dc1da45e74e031a1e7b7b2d2100a1 269 PANTHER PTHR30520 1 262 5.4E-66 T 23-04-2016 CYCME_RS08620 7d3dc1da45e74e031a1e7b7b2d2100a1 269 Gene3D G3DSA:1.20.1080.10 23 261 1.9E-66 T 23-04-2016 IPR023271 Aquaporin-like CYCME_RS07965 5c31dd69420592d4398610e04444a8cf 304 SUPERFAMILY SSF54593 8 126 1.78E-14 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS07965 5c31dd69420592d4398610e04444a8cf 304 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 150 271 3.2E-19 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS07965 5c31dd69420592d4398610e04444a8cf 304 Gene3D G3DSA:3.10.180.10 9 130 2.4E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS07965 5c31dd69420592d4398610e04444a8cf 304 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 249 270 - T 23-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CYCME_RS07965 5c31dd69420592d4398610e04444a8cf 304 SUPERFAMILY SSF54593 146 297 2.02E-26 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS07965 5c31dd69420592d4398610e04444a8cf 304 Gene3D G3DSA:3.10.180.10 142 298 2.3E-40 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 PANTHER PTHR10381 20 214 7.5E-136 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 20 210 44.06 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 PANTHER PTHR10381:SF22 20 214 7.5E-136 T 23-04-2016 CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 SUPERFAMILY SSF52096 28 211 9.53E-75 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 107 118 - T 23-04-2016 IPR018215 ClpP, Ser active site CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 PRINTS PR00127 Clp protease catalytic subunit P signature 128 147 1.26E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 PRINTS PR00127 Clp protease catalytic subunit P signature 185 204 1.26E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 PRINTS PR00127 Clp protease catalytic subunit P signature 107 124 1.26E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 PRINTS PR00127 Clp protease catalytic subunit P signature 76 96 1.26E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 PRINTS PR00127 Clp protease catalytic subunit P signature 36 51 1.26E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 Gene3D G3DSA:3.90.226.10 20 209 7.4E-90 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 Pfam PF00574 Clp protease 30 209 4.9E-87 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 19 208 1.1E-104 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CYCME_RS08090 ac3e07778eff86f641cb1c8afdb50633 214 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 129 142 - T 23-04-2016 IPR033135 ClpP, histidine active site CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 SUPERFAMILY SSF56327 156 325 4.48E-60 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 152 1.8E-33 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 319 8.9E-147 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 156 322 6.5E-37 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 325 55.011 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 PANTHER PTHR23382 1 325 1.5E-201 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 155 167 - T 23-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 Gene3D G3DSA:3.90.110.10 155 325 2.2E-71 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 Gene3D G3DSA:3.40.50.720 3 153 2.5E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 SUPERFAMILY SSF51735 1 155 1.97E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05010 2b3062469cd338d93725a9c58459d11b 325 PIRSF PIRSF000102 1 324 9.4E-64 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CYCME_RS00365 7ccd8526f10abe961968e0be0dea30a9 185 SUPERFAMILY SSF54523 9 125 4.47E-19 T 23-04-2016 CYCME_RS00365 7ccd8526f10abe961968e0be0dea30a9 185 Gene3D G3DSA:3.30.700.10 9 62 6.3E-9 T 23-04-2016 CYCME_RS00365 7ccd8526f10abe961968e0be0dea30a9 185 Pfam PF12019 Type II transport protein GspH 44 173 1.5E-22 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CYCME_RS00365 7ccd8526f10abe961968e0be0dea30a9 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS00365 7ccd8526f10abe961968e0be0dea30a9 185 Pfam PF13633 Prokaryotic N-terminal methylation site 7 32 1.4E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS00365 7ccd8526f10abe961968e0be0dea30a9 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.3E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS09820 476950293c6d11005b8651c86a2f0fae 429 PANTHER PTHR30026:SF4 8 429 7.8E-44 T 23-04-2016 CYCME_RS09820 476950293c6d11005b8651c86a2f0fae 429 Pfam PF02321 Outer membrane efflux protein 28 224 1.2E-30 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS09820 476950293c6d11005b8651c86a2f0fae 429 Pfam PF02321 Outer membrane efflux protein 245 426 1.1E-26 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS09820 476950293c6d11005b8651c86a2f0fae 429 PANTHER PTHR30026 8 429 7.8E-44 T 23-04-2016 CYCME_RS09820 476950293c6d11005b8651c86a2f0fae 429 Gene3D G3DSA:1.20.1600.10 24 426 3.0E-65 T 23-04-2016 CYCME_RS09820 476950293c6d11005b8651c86a2f0fae 429 SUPERFAMILY SSF56954 5 426 3.92E-76 T 23-04-2016 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 9 305 8.5E-99 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 PANTHER PTHR11938 56 305 1.0E-46 T 23-04-2016 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 6 307 35.753 T 23-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 Gene3D G3DSA:3.20.20.70 4 306 7.9E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 SUPERFAMILY SSF51395 4 306 4.76E-76 T 23-04-2016 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 PIRSF PIRSF000164 1 308 7.7E-78 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 PANTHER PTHR11938:SF5 56 305 1.0E-46 T 23-04-2016 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 Pfam PF01180 Dihydroorotate dehydrogenase 6 291 1.4E-68 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CYCME_RS00150 3c62b2bbbc969a3ee3bd07571f665803 309 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 245 265 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 Gene3D G3DSA:3.30.200.20 23 111 3.3E-20 T 23-04-2016 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 166 178 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 SUPERFAMILY SSF56112 21 295 5.66E-55 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 PANTHER PTHR24362:SF160 86 298 6.8E-45 T 23-04-2016 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 PANTHER PTHR24362:SF160 14 67 6.8E-45 T 23-04-2016 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 Pfam PF00069 Protein kinase domain 31 288 7.9E-36 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 PANTHER PTHR24362 86 298 6.8E-45 T 23-04-2016 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 PANTHER PTHR24362 14 67 6.8E-45 T 23-04-2016 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 Gene3D G3DSA:1.10.510.10 112 295 6.0E-33 T 23-04-2016 CYCME_RS03025 fa09d4b78d725226d1b3bb992f44c40c 303 SMART SM00220 29 297 1.8E-18 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CYCME_RS05755 4cc97d35dc30931f3030d95ef41f4faf 101 PANTHER PTHR35983 1 88 1.4E-18 T 23-04-2016 CYCME_RS05755 4cc97d35dc30931f3030d95ef41f4faf 101 Pfam PF02641 Uncharacterized ACR, COG1993 10 87 3.0E-16 T 23-04-2016 IPR003793 Domain of unknown function DUF190 CYCME_RS05755 4cc97d35dc30931f3030d95ef41f4faf 101 Gene3D G3DSA:3.30.70.120 4 86 3.8E-19 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYCME_RS05755 4cc97d35dc30931f3030d95ef41f4faf 101 SUPERFAMILY SSF54913 10 85 3.11E-15 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CYCME_RS01780 de81ae75693fba0de0ebbcb9be593f24 183 PANTHER PTHR32194 1 177 2.4E-121 T 23-04-2016 CYCME_RS01780 de81ae75693fba0de0ebbcb9be593f24 183 Pfam PF00227 Proteasome subunit 5 174 1.4E-21 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 CYCME_RS01780 de81ae75693fba0de0ebbcb9be593f24 183 PIRSF PIRSF039093 2 180 3.8E-89 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CYCME_RS01780 de81ae75693fba0de0ebbcb9be593f24 183 Gene3D G3DSA:3.60.20.10 7 178 5.8E-85 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS01780 de81ae75693fba0de0ebbcb9be593f24 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 4.0E-86 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CYCME_RS01780 de81ae75693fba0de0ebbcb9be593f24 183 SUPERFAMILY SSF56235 4 177 1.18E-58 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS01780 de81ae75693fba0de0ebbcb9be593f24 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 41.219 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 Pfam PF02163 Peptidase family M50 10 436 3.1E-85 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 PANTHER PTHR22939 145 451 1.7E-65 T 23-04-2016 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 SMART SM00228 116 187 0.049 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 SMART SM00228 210 279 0.024 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 449 2.3E-126 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 Gene3D G3DSA:2.30.42.10 97 197 6.1E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 Gene3D G3DSA:2.30.42.10 203 289 1.6E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 SUPERFAMILY SSF50156 218 290 3.42E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 SUPERFAMILY SSF50156 89 188 2.1E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CYCME_RS07670 ab06ca0b89a622dfcec53575f44e053f 451 PANTHER PTHR22939:SF78 145 451 1.7E-65 T 23-04-2016 CYCME_RS08735 05de7deb643a22949bec2f1f813dfcfd 370 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 3 362 9.7E-151 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CYCME_RS08735 05de7deb643a22949bec2f1f813dfcfd 370 PANTHER PTHR30149:SF0 2 370 1.9E-183 T 23-04-2016 CYCME_RS08735 05de7deb643a22949bec2f1f813dfcfd 370 Pfam PF01924 Hydrogenase formation hypA family 16 359 1.0E-152 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CYCME_RS08735 05de7deb643a22949bec2f1f813dfcfd 370 PANTHER PTHR30149 2 370 1.9E-183 T 23-04-2016 CYCME_RS08735 05de7deb643a22949bec2f1f813dfcfd 370 PIRSF PIRSF005622 1 364 4.1E-155 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CYCME_RS10360 a537d3f8bbf9e1fad02aa3d6eb79e4ca 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 185 5.7E-74 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 CYCME_RS10360 a537d3f8bbf9e1fad02aa3d6eb79e4ca 190 SUPERFAMILY SSF52507 2 181 1.11E-62 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CYCME_RS10360 a537d3f8bbf9e1fad02aa3d6eb79e4ca 190 PANTHER PTHR30108:SF10 2 187 5.1E-82 T 23-04-2016 CYCME_RS10360 a537d3f8bbf9e1fad02aa3d6eb79e4ca 190 PANTHER PTHR30108 2 187 5.1E-82 T 23-04-2016 CYCME_RS10360 a537d3f8bbf9e1fad02aa3d6eb79e4ca 190 Pfam PF02441 Flavoprotein 3 127 5.8E-28 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CYCME_RS10360 a537d3f8bbf9e1fad02aa3d6eb79e4ca 190 Gene3D G3DSA:3.40.50.1950 2 187 1.9E-77 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CYCME_RS10360 a537d3f8bbf9e1fad02aa3d6eb79e4ca 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 187 37.847 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 CYCME_RS02410 ae867fe12d433f8cc3f7ec3e058b40be 460 PANTHER PTHR11603 83 236 1.6E-14 T 23-04-2016 CYCME_RS02410 ae867fe12d433f8cc3f7ec3e058b40be 460 PANTHER PTHR11603:SF148 83 236 1.6E-14 T 23-04-2016 CYCME_RS02410 ae867fe12d433f8cc3f7ec3e058b40be 460 Gene3D G3DSA:2.40.160.10 75 433 5.8E-18 T 23-04-2016 IPR023614 Porin domain CYCME_RS02410 ae867fe12d433f8cc3f7ec3e058b40be 460 SUPERFAMILY SSF56935 130 430 4.27E-20 T 23-04-2016 CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 20.529 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 PANTHER PTHR12903 3 104 3.2E-43 T 23-04-2016 CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 Pfam PF00467 KOW motif 6 36 2.7E-5 T 23-04-2016 IPR005824 KOW CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 SMART SM00739 3 30 1.6E-4 T 23-04-2016 IPR005824 KOW CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 102 5.6E-24 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 SUPERFAMILY SSF50104 3 102 8.53E-33 T 23-04-2016 IPR008991 Translation protein SH3-like domain CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 23-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 102 4.7E-39 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03710 82b36167a9b1a6535efad15183ede94e 105 Gene3D G3DSA:2.30.30.30 3 92 1.3E-21 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 Pfam PF08279 HTH domain 10 57 4.8E-13 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 327 29.042 T 23-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 88 327 1.6E-55 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 Gene3D G3DSA:3.30.930.10 81 277 1.4E-52 T 23-04-2016 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 SUPERFAMILY SSF55681 85 277 3.56E-51 T 23-04-2016 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 Gene3D G3DSA:1.10.10.10 8 60 2.1E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 SUPERFAMILY SSF50037 283 327 6.41E-7 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 Gene3D G3DSA:2.30.30.100 280 328 5.8E-15 T 23-04-2016 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 91 216 1.4E-17 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 Pfam PF02237 Biotin protein ligase C terminal domain 283 327 5.1E-8 T 23-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 PANTHER PTHR12835 8 328 3.1E-64 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CYCME_RS11425 6429ae3bc61d7b4c8ec9e5cb023cd338 330 SUPERFAMILY SSF46785 2 60 9.87E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 SMART SM01116 75 147 3.2E-50 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 TIGRFAM TIGR00673 cynS: cyanase 4 147 1.9E-50 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 Pfam PF02560 Cyanate lyase C-terminal domain 79 145 3.7E-35 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 Hamap MF_00535 Cyanate hydratase [cynS]. 1 147 79.696 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 SUPERFAMILY SSF47413 1 77 2.6E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 SUPERFAMILY SSF55234 80 147 7.32E-30 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 PRINTS PR01693 Cyanase signature 101 117 5.2E-29 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 PRINTS PR01693 Cyanase signature 83 97 5.2E-29 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 PRINTS PR01693 Cyanase signature 34 51 5.2E-29 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 PRINTS PR01693 Cyanase signature 132 142 5.2E-29 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 PRINTS PR01693 Cyanase signature 14 29 5.2E-29 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 Gene3D G3DSA:1.10.260.40 1 79 2.6E-29 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 Gene3D G3DSA:3.30.1160.10 81 146 2.5E-36 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 PANTHER PTHR34186 2 147 8.1E-63 T 23-04-2016 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 PANTHER PTHR34186:SF2 2 147 8.1E-63 T 23-04-2016 CYCME_RS08625 0157a89da2e765b96676547bb2b01450 147 PIRSF PIRSF001263 1 147 8.0E-50 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CYCME_RS12390 19df05f5187be1bb28a9ebf3094e0a89 177 PANTHER PTHR41534:SF2 8 177 1.1E-28 T 23-04-2016 CYCME_RS12390 19df05f5187be1bb28a9ebf3094e0a89 177 Gene3D G3DSA:3.10.450.50 4 177 3.7E-57 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS12390 19df05f5187be1bb28a9ebf3094e0a89 177 SUPERFAMILY SSF54427 10 177 3.22E-40 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS12390 19df05f5187be1bb28a9ebf3094e0a89 177 PANTHER PTHR41534 8 177 1.1E-28 T 23-04-2016 CYCME_RS12390 19df05f5187be1bb28a9ebf3094e0a89 177 Pfam PF00866 Ring hydroxylating beta subunit 24 168 5.8E-42 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS07250 eae4545f09d693ca579f3b9d8196066f 273 PANTHER PTHR21496:SF10 53 266 6.0E-64 T 23-04-2016 CYCME_RS07250 eae4545f09d693ca579f3b9d8196066f 273 Pfam PF04305 Protein of unknown function (DUF455) 16 259 1.0E-84 T 23-04-2016 IPR007402 Protein of unknown function DUF455 CYCME_RS07250 eae4545f09d693ca579f3b9d8196066f 273 SUPERFAMILY SSF47240 41 231 5.11E-15 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS07250 eae4545f09d693ca579f3b9d8196066f 273 PIRSF PIRSF012318 1 273 3.5E-82 T 23-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 CYCME_RS07250 eae4545f09d693ca579f3b9d8196066f 273 PANTHER PTHR21496 53 266 6.0E-64 T 23-04-2016 CYCME_RS00380 f42d9b01c6e57b839f4077c918e277d7 229 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 22 224 8.7E-72 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CYCME_RS00380 f42d9b01c6e57b839f4077c918e277d7 229 Gene3D G3DSA:3.20.20.10 19 224 4.9E-80 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS00380 f42d9b01c6e57b839f4077c918e277d7 229 PIRSF PIRSF004848 6 228 1.4E-73 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CYCME_RS00380 f42d9b01c6e57b839f4077c918e277d7 229 Pfam PF01168 Alanine racemase, N-terminal domain 20 224 1.5E-24 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CYCME_RS00380 f42d9b01c6e57b839f4077c918e277d7 229 PANTHER PTHR10146 26 224 1.7E-84 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CYCME_RS00380 f42d9b01c6e57b839f4077c918e277d7 229 SUPERFAMILY SSF51419 17 222 1.49E-73 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS00380 f42d9b01c6e57b839f4077c918e277d7 229 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 73 87 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 Gene3D G3DSA:3.40.640.10 2 285 8.2E-117 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 Gene3D G3DSA:3.90.1150.10 286 421 4.2E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 PIRSF PIRSF001434 1 424 1.5E-127 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 PANTHER PTHR11808 264 424 9.7E-237 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 PANTHER PTHR11808 1 234 9.7E-237 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 421 1.7E-194 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 2.0E-138 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 PANTHER PTHR11808:SF12 264 424 9.7E-237 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 PANTHER PTHR11808:SF12 1 234 9.7E-237 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CYCME_RS01440 70e3db44ffabe1597fc6f0025a845a9c 424 SUPERFAMILY SSF53383 1 421 4.47E-127 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS07770 ff48e9e28eaebe87b1fd9011ed525503 298 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 71 87 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 CYCME_RS07770 ff48e9e28eaebe87b1fd9011ed525503 298 SUPERFAMILY SSF53474 64 296 6.06E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS07770 ff48e9e28eaebe87b1fd9011ed525503 298 Pfam PF07859 alpha/beta hydrolase fold 71 272 4.0E-56 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CYCME_RS07770 ff48e9e28eaebe87b1fd9011ed525503 298 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 139 151 - T 23-04-2016 IPR033140 Lipase, GDXG, putative serine active site CYCME_RS07770 ff48e9e28eaebe87b1fd9011ed525503 298 Gene3D G3DSA:3.40.50.1820 62 296 2.8E-68 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS07770 ff48e9e28eaebe87b1fd9011ed525503 298 PANTHER PTHR23024 71 298 8.8E-66 T 23-04-2016 CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 PANTHER PTHR11712 1 404 1.2E-158 T 23-04-2016 CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 243 6.5E-43 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 SUPERFAMILY SSF53901 213 403 1.89E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 4.3E-30 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 SMART SM00825 Beta-ketoacyl synthase 4 405 3.3E-12 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 Gene3D G3DSA:3.40.47.10 261 404 1.4E-48 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 Gene3D G3DSA:3.40.47.10 6 257 1.5E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS10155 cd461c897bb8d04996d8eb7841c27fc8 405 SUPERFAMILY SSF53901 1 251 4.12E-62 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CYCME_RS01170 b5ee75f3cf64b503962068bd900ea850 891 Gene3D G3DSA:3.40.50.2000 709 868 6.5E-28 T 23-04-2016 CYCME_RS01170 b5ee75f3cf64b503962068bd900ea850 891 Gene3D G3DSA:3.20.20.140 39 135 8.6E-5 T 23-04-2016 CYCME_RS01170 b5ee75f3cf64b503962068bd900ea850 891 SUPERFAMILY SSF89550 38 195 4.51E-13 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CYCME_RS01170 b5ee75f3cf64b503962068bd900ea850 891 SUPERFAMILY SSF89550 228 251 4.51E-13 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CYCME_RS01170 b5ee75f3cf64b503962068bd900ea850 891 SUPERFAMILY SSF53756 529 882 5.76E-53 T 23-04-2016 CYCME_RS01170 b5ee75f3cf64b503962068bd900ea850 891 Pfam PF00534 Glycosyl transferases group 1 717 869 1.2E-28 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CYCME_RS01170 b5ee75f3cf64b503962068bd900ea850 891 PANTHER PTHR12526 700 884 1.9E-39 T 23-04-2016 CYCME_RS01935 e044cf8567961a68352279e314270760 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 6.4E-12 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 179 195 6.4E-12 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 137 154 6.4E-12 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 237 249 6.4E-12 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 33 46 6.4E-12 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 PIRSF PIRSF036483 2 418 1.9E-199 T 23-04-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 Pfam PF00365 Phosphofructokinase 10 323 2.1E-48 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 399 44.796 T 23-04-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 PANTHER PTHR13697:SF19 87 376 4.0E-133 T 23-04-2016 CYCME_RS01935 e044cf8567961a68352279e314270760 420 SUPERFAMILY SSF53784 3 412 9.29E-110 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 CYCME_RS01935 e044cf8567961a68352279e314270760 420 Gene3D G3DSA:3.40.50.450 3 238 9.3E-54 T 23-04-2016 CYCME_RS01935 e044cf8567961a68352279e314270760 420 PANTHER PTHR13697 87 376 4.0E-133 T 23-04-2016 CYCME_RS12090 944fb1e777d8524242e6bfdfab016b58 338 SUPERFAMILY SSF51735 1 182 4.96E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12090 944fb1e777d8524242e6bfdfab016b58 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.1E-131 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS12090 944fb1e777d8524242e6bfdfab016b58 338 SUPERFAMILY SSF48179 183 332 3.06E-68 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS12090 944fb1e777d8524242e6bfdfab016b58 338 PANTHER PTHR21371 1 337 1.9E-186 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS12090 944fb1e777d8524242e6bfdfab016b58 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 4.5E-63 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS12090 944fb1e777d8524242e6bfdfab016b58 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 1.5E-74 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS12090 944fb1e777d8524242e6bfdfab016b58 338 Gene3D G3DSA:1.10.1040.10 29 325 2.3E-113 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS12090 944fb1e777d8524242e6bfdfab016b58 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 44.593 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS01230 815f54c02c2d71241014d65ad407a14c 219 Gene3D G3DSA:3.40.30.10 17 95 2.3E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS01230 815f54c02c2d71241014d65ad407a14c 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 199 3.5E-7 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CYCME_RS01230 815f54c02c2d71241014d65ad407a14c 219 PANTHER PTHR11260:SF157 14 202 2.3E-38 T 23-04-2016 CYCME_RS01230 815f54c02c2d71241014d65ad407a14c 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 16 86 1.8E-11 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CYCME_RS01230 815f54c02c2d71241014d65ad407a14c 219 SUPERFAMILY SSF52833 16 92 4.49E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS01230 815f54c02c2d71241014d65ad407a14c 219 PANTHER PTHR11260 14 202 2.3E-38 T 23-04-2016 CYCME_RS01230 815f54c02c2d71241014d65ad407a14c 219 Gene3D G3DSA:1.20.1050.10 96 209 3.7E-29 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS01230 815f54c02c2d71241014d65ad407a14c 219 SUPERFAMILY SSF47616 86 205 4.46E-29 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS00460 77c03957ed6c6e665d9f5c625cbe7269 136 PANTHER PTHR30574:SF1 3 136 4.0E-32 T 23-04-2016 CYCME_RS00460 77c03957ed6c6e665d9f5c625cbe7269 136 PANTHER PTHR30574 3 136 4.0E-32 T 23-04-2016 CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 Gene3D G3DSA:2.140.10.10 4 400 6.0E-60 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 PANTHER PTHR32303 26 389 4.7E-68 T 23-04-2016 CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 SMART SM00564 338 369 89.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 SMART SM00564 161 193 1.7 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 SMART SM00564 81 113 2.0E-5 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 SMART SM00564 257 289 0.07 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 SMART SM00564 207 238 130.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 SMART SM00564 122 153 33.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 400 33.012 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 Pfam PF13360 PQQ-like domain 95 325 7.6E-47 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 SUPERFAMILY SSF50998 51 392 3.01E-71 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 PANTHER PTHR32303:SF8 26 389 4.7E-68 T 23-04-2016 CYCME_RS09685 34fb183f4ae22218917b73666c240536 408 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 3 398 2.0E-113 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB CYCME_RS00595 abb26621c4338a7a70204b3e0fdb96b5 146 PANTHER PTHR30353 1 144 2.2E-42 T 23-04-2016 IPR032818 DedA family CYCME_RS00595 abb26621c4338a7a70204b3e0fdb96b5 146 Pfam PF09335 SNARE associated Golgi protein 36 141 1.1E-9 T 23-04-2016 IPR032816 SNARE associated Golgi protein CYCME_RS00595 abb26621c4338a7a70204b3e0fdb96b5 146 PANTHER PTHR30353:SF12 1 144 2.2E-42 T 23-04-2016 CYCME_RS00595 abb26621c4338a7a70204b3e0fdb96b5 146 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 12 121 2.0E-5 T 23-04-2016 IPR020143 Uncharacterised protein family, RP436 CYCME_RS00835 96df53d7798ea5fe2ac538af39d0d816 188 PANTHER PTHR11241:SF1 1 187 7.5E-76 T 23-04-2016 CYCME_RS00835 96df53d7798ea5fe2ac538af39d0d816 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 187 2.0E-50 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 CYCME_RS00835 96df53d7798ea5fe2ac538af39d0d816 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.889 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 CYCME_RS00835 96df53d7798ea5fe2ac538af39d0d816 188 Gene3D G3DSA:2.70.40.10 2 187 4.8E-68 T 23-04-2016 IPR029054 dUTPase-like CYCME_RS00835 96df53d7798ea5fe2ac538af39d0d816 188 Pfam PF00692 dUTPase 73 183 2.0E-7 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CYCME_RS00835 96df53d7798ea5fe2ac538af39d0d816 188 PANTHER PTHR11241 1 187 7.5E-76 T 23-04-2016 CYCME_RS00835 96df53d7798ea5fe2ac538af39d0d816 188 SUPERFAMILY SSF51283 2 187 8.37E-54 T 23-04-2016 IPR029054 dUTPase-like CYCME_RS05750 d47f7bbad747d207f88b5c50b75ee3cb 124 TIGRFAM TIGR00494 crcB: protein CrcB 5 121 1.2E-29 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CYCME_RS05750 d47f7bbad747d207f88b5c50b75ee3cb 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 117 1.3E-24 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CYCME_RS05750 d47f7bbad747d207f88b5c50b75ee3cb 124 PANTHER PTHR28259 1 124 5.1E-39 T 23-04-2016 CYCME_RS05750 d47f7bbad747d207f88b5c50b75ee3cb 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 122 18.851 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 293 3.4E-120 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 293 8.5E-139 T 23-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 Gene3D G3DSA:3.40.50.1100 41 141 6.2E-39 T 23-04-2016 CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 Gene3D G3DSA:3.40.50.1100 1 40 6.9E-79 T 23-04-2016 CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 Gene3D G3DSA:3.40.50.1100 147 294 6.9E-79 T 23-04-2016 CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 SUPERFAMILY SSF53686 3 290 1.1E-91 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 PANTHER PTHR10314 1 293 8.6E-164 T 23-04-2016 CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 282 4.8E-68 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS08500 6dfa806afbf371b61b95fddad74ecbd9 295 PANTHER PTHR10314:SF100 1 293 8.6E-164 T 23-04-2016 CYCME_RS05005 c5c01c483e965a11450ae37f881736a0 106 Pfam PF10993 Protein of unknown function (DUF2818) 7 97 3.2E-32 T 23-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 Gene3D G3DSA:1.10.150.20 244 323 4.8E-34 T 23-04-2016 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 313 8.2E-106 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 Gene3D G3DSA:3.30.1360.10 16 67 2.5E-9 T 23-04-2016 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 PANTHER PTHR32108 1 328 8.6E-135 T 23-04-2016 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 PANTHER PTHR32108:SF0 1 328 8.6E-135 T 23-04-2016 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 SUPERFAMILY SSF47789 249 323 4.84E-24 T 23-04-2016 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 3.6E-23 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 33.862 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 SUPERFAMILY SSF56553 53 176 6.02E-40 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 249 306 1.5E-22 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 1.0E-31 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 SUPERFAMILY SSF55257 177 231 6.77E-26 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 SUPERFAMILY SSF55257 16 53 6.77E-26 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 SMART SM00662 23 232 8.5E-84 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 9.1E-21 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03775 be5737d0145203779ea91c063acd6591 334 Gene3D G3DSA:2.170.120.12 68 175 1.5E-41 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 1037 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 Gene3D G3DSA:2.40.50.140 998 1083 3.8E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 SUPERFAMILY SSF160975 830 868 7.72E-5 T 23-04-2016 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 PANTHER PTHR32294 3 1167 0.0 T 23-04-2016 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 Pfam PF14579 Helix-hairpin-helix motif 805 895 2.4E-26 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 Gene3D G3DSA:1.10.150.280 832 871 5.1E-7 T 23-04-2016 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 SMART SM00481 8 75 1.6E-22 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 SUPERFAMILY SSF89550 6 264 6.28E-18 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 Pfam PF01336 OB-fold nucleic acid binding domain 1002 1069 3.5E-9 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 Pfam PF02811 PHP domain 9 173 9.6E-42 T 23-04-2016 IPR004013 PHP domain GO:0003824 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 732 2.9E-175 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 Gene3D G3DSA:3.20.20.140 6 257 1.2E-24 T 23-04-2016 CYCME_RS07630 e63b6ed541049e28249ff75dc0f799a6 1167 PANTHER PTHR32294:SF0 3 1167 0.0 T 23-04-2016 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 PIRSF PIRSF016578 1 378 2.3E-14 T 23-04-2016 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 Gene3D G3DSA:1.20.140.10 213 377 3.5E-60 T 23-04-2016 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 117 212 1.7E-20 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 SUPERFAMILY SSF56645 3 236 1.83E-59 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 SUPERFAMILY SSF47203 224 376 1.56E-52 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 PANTHER PTHR10909 3 375 1.6E-129 T 23-04-2016 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 374 2.7E-46 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 Gene3D G3DSA:1.10.540.10 3 114 3.7E-27 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 113 2.7E-22 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05825 2049b391129fb2537c1bd34738373faf 380 Gene3D G3DSA:2.40.110.10 116 212 7.4E-31 T 23-04-2016 CYCME_RS02735 4b99246ff16b28b4e193a2d4443336b8 187 SUPERFAMILY SSF54523 8 87 2.9E-10 T 23-04-2016 CYCME_RS02735 4b99246ff16b28b4e193a2d4443336b8 187 PANTHER PTHR30093 1 72 3.6E-12 T 23-04-2016 CYCME_RS02735 4b99246ff16b28b4e193a2d4443336b8 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.2E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS02735 4b99246ff16b28b4e193a2d4443336b8 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS02735 4b99246ff16b28b4e193a2d4443336b8 187 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 27 1.0E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CYCME_RS04980 aa724f865706d21b38a9b20d04f83c6e 259 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CYCME_RS04980 aa724f865706d21b38a9b20d04f83c6e 259 PANTHER PTHR20941:SF1 1 259 2.3E-119 T 23-04-2016 CYCME_RS04980 aa724f865706d21b38a9b20d04f83c6e 259 Pfam PF00809 Pterin binding enzyme 1 240 2.0E-87 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CYCME_RS04980 aa724f865706d21b38a9b20d04f83c6e 259 SUPERFAMILY SSF51717 1 256 1.57E-99 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CYCME_RS04980 aa724f865706d21b38a9b20d04f83c6e 259 PANTHER PTHR20941 1 259 2.3E-119 T 23-04-2016 CYCME_RS04980 aa724f865706d21b38a9b20d04f83c6e 259 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 254 6.4E-102 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 CYCME_RS04980 aa724f865706d21b38a9b20d04f83c6e 259 Gene3D G3DSA:3.20.20.20 1 257 4.4E-106 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CYCME_RS08445 3dc9871c27a5336c90b6200877636baa 415 Pfam PF02687 FtsX-like permease family 275 408 2.2E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CYCME_RS08445 3dc9871c27a5336c90b6200877636baa 415 PANTHER PTHR30489:SF8 1 415 4.3E-112 T 23-04-2016 CYCME_RS08445 3dc9871c27a5336c90b6200877636baa 415 PANTHER PTHR30489 1 415 4.3E-112 T 23-04-2016 CYCME_RS08445 3dc9871c27a5336c90b6200877636baa 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 415 1.7E-149 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CYCME_RS08445 3dc9871c27a5336c90b6200877636baa 415 Pfam PF12704 MacB-like periplasmic core domain 27 211 1.1E-18 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CYCME_RS07160 941cc534f9857b92b377df9f5fd3496e 386 Pfam PF13505 Outer membrane protein beta-barrel domain 179 378 1.0E-7 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel CYCME_RS07160 941cc534f9857b92b377df9f5fd3496e 386 SUPERFAMILY SSF56935 189 379 7.87E-8 T 23-04-2016 CYCME_RS07160 941cc534f9857b92b377df9f5fd3496e 386 Gene3D G3DSA:2.40.170.20 294 380 1.5E-6 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS07160 941cc534f9857b92b377df9f5fd3496e 386 Gene3D G3DSA:2.40.170.20 123 276 3.6E-5 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS02065 1c0eb529df62f4a13e826b8e6eff579a 268 SUPERFAMILY SSF53474 68 261 2.63E-18 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS02065 1c0eb529df62f4a13e826b8e6eff579a 268 Pfam PF12048 Protein of unknown function (DUF3530) 128 223 8.9E-9 T 23-04-2016 IPR022529 Protein of unknown function DUF3530 CYCME_RS02065 1c0eb529df62f4a13e826b8e6eff579a 268 Pfam PF12048 Protein of unknown function (DUF3530) 27 114 3.0E-16 T 23-04-2016 IPR022529 Protein of unknown function DUF3530 CYCME_RS02065 1c0eb529df62f4a13e826b8e6eff579a 268 Gene3D G3DSA:3.40.50.1820 66 243 1.2E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS05470 c194052a5e9b7893ba359a73815143d2 409 PANTHER PTHR35793:SF2 2 409 1.1E-220 T 23-04-2016 CYCME_RS05470 c194052a5e9b7893ba359a73815143d2 409 PANTHER PTHR35793 2 409 1.1E-220 T 23-04-2016 CYCME_RS05470 c194052a5e9b7893ba359a73815143d2 409 PIRSF PIRSF036542 1 409 8.1E-182 T 23-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB CYCME_RS05470 c194052a5e9b7893ba359a73815143d2 409 Pfam PF07670 Nucleoside recognition 51 155 2.9E-9 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CYCME_RS03465 be7eade5b5f1e03b81f3be98ed67b0ba 368 Pfam PF01098 Cell cycle protein 21 364 5.4E-107 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CYCME_RS03465 be7eade5b5f1e03b81f3be98ed67b0ba 368 PANTHER PTHR30474 1 367 5.8E-158 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CYCME_RS03465 be7eade5b5f1e03b81f3be98ed67b0ba 368 PANTHER PTHR30474:SF1 1 367 5.8E-158 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CYCME_RS03465 be7eade5b5f1e03b81f3be98ed67b0ba 368 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 18 364 1.7E-132 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CYCME_RS03465 be7eade5b5f1e03b81f3be98ed67b0ba 368 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CYCME_RS00875 a34e9f0d22f6d2fcd8207f837a3a4d95 277 Pfam PF00924 Mechanosensitive ion channel 64 261 2.4E-53 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CYCME_RS00875 a34e9f0d22f6d2fcd8207f837a3a4d95 277 Gene3D G3DSA:2.30.30.60 122 171 6.9E-17 T 23-04-2016 CYCME_RS00875 a34e9f0d22f6d2fcd8207f837a3a4d95 277 Gene3D G3DSA:3.30.70.100 175 259 2.0E-32 T 23-04-2016 CYCME_RS00875 a34e9f0d22f6d2fcd8207f837a3a4d95 277 SUPERFAMILY SSF82689 174 272 1.05E-34 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CYCME_RS00875 a34e9f0d22f6d2fcd8207f837a3a4d95 277 PANTHER PTHR30221 5 275 5.4E-102 T 23-04-2016 CYCME_RS00875 a34e9f0d22f6d2fcd8207f837a3a4d95 277 SUPERFAMILY SSF82861 20 105 1.7E-16 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CYCME_RS00875 a34e9f0d22f6d2fcd8207f837a3a4d95 277 SUPERFAMILY SSF50182 107 172 3.92E-16 T 23-04-2016 IPR010920 LSM domain CYCME_RS00875 a34e9f0d22f6d2fcd8207f837a3a4d95 277 PANTHER PTHR30221:SF7 5 275 5.4E-102 T 23-04-2016 CYCME_RS01105 d79526b81433a2767794386acf8c25a9 566 Pfam PF06980 Protein of unknown function (DUF1302) 31 566 3.2E-107 T 23-04-2016 IPR010727 Protein of unknown function DUF1302 CYCME_RS02145 2c585ba875643f12d597388ac4fb0e94 241 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 67 234 9.0E-45 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 CYCME_RS02145 2c585ba875643f12d597388ac4fb0e94 241 Gene3D G3DSA:3.40.50.300 65 238 1.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02145 2c585ba875643f12d597388ac4fb0e94 241 Pfam PF01583 Adenylylsulphate kinase 72 222 1.3E-42 T 23-04-2016 CYCME_RS02145 2c585ba875643f12d597388ac4fb0e94 241 SUPERFAMILY SSF52540 71 237 4.98E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02145 2c585ba875643f12d597388ac4fb0e94 241 PANTHER PTHR11055:SF15 75 240 1.0E-36 T 23-04-2016 CYCME_RS02145 2c585ba875643f12d597388ac4fb0e94 241 Pfam PF09834 Predicted membrane protein (DUF2061) 10 60 3.9E-16 T 23-04-2016 IPR018638 Domain of unknown function DUF2061, membrane CYCME_RS02145 2c585ba875643f12d597388ac4fb0e94 241 PANTHER PTHR11055 75 240 1.0E-36 T 23-04-2016 CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 5.1E-20 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 5.1E-20 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 5.1E-20 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 5.1E-20 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 SUPERFAMILY SSF52788 2 151 1.31E-50 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 PANTHER PTHR11717:SF7 4 157 5.7E-56 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 SMART SM00226 4 153 4.0E-47 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 151 7.0E-40 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 PANTHER PTHR11717 4 157 5.7E-56 T 23-04-2016 CYCME_RS08400 8ad9ad8d8098a0bd673efab93ceac878 160 Gene3D G3DSA:3.40.50.270 2 157 2.4E-52 T 23-04-2016 CYCME_RS09920 3e40c874d8d088d24a0d428fa245741f 89 PANTHER PTHR33398 2 89 7.1E-25 T 23-04-2016 CYCME_RS09920 3e40c874d8d088d24a0d428fa245741f 89 Pfam PF01649 Ribosomal protein S20 2 83 7.1E-24 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09920 3e40c874d8d088d24a0d428fa245741f 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.449 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09920 3e40c874d8d088d24a0d428fa245741f 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.9E-21 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09920 3e40c874d8d088d24a0d428fa245741f 89 Gene3D G3DSA:1.20.58.110 1 86 2.8E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09920 3e40c874d8d088d24a0d428fa245741f 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 1.0E-15 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09920 3e40c874d8d088d24a0d428fa245741f 89 SUPERFAMILY SSF46992 3 86 3.92E-26 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS01920 5bf0f4b9003d6c4bcb813a3330a74ebe 507 PANTHER PTHR11938 154 483 6.3E-68 T 23-04-2016 CYCME_RS01920 5bf0f4b9003d6c4bcb813a3330a74ebe 507 SUPERFAMILY SSF51395 23 487 4.95E-125 T 23-04-2016 CYCME_RS01920 5bf0f4b9003d6c4bcb813a3330a74ebe 507 PIRSF PIRSF006429 5 505 1.6E-153 T 23-04-2016 IPR024188 Glutamate synthase large subunit-like protein CYCME_RS01920 5bf0f4b9003d6c4bcb813a3330a74ebe 507 Pfam PF01645 Conserved region in glutamate synthase 144 470 8.9E-88 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CYCME_RS01920 5bf0f4b9003d6c4bcb813a3330a74ebe 507 Gene3D G3DSA:3.20.20.70 44 489 7.9E-118 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS01920 5bf0f4b9003d6c4bcb813a3330a74ebe 507 PANTHER PTHR11938:SF50 154 483 6.3E-68 T 23-04-2016 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 23-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 SUPERFAMILY SSF56059 1 238 2.55E-78 T 23-04-2016 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.2E-161 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 Gene3D G3DSA:3.30.1490.20 22 93 1.1E-30 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 Pfam PF00549 CoA-ligase 262 382 4.1E-27 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 Pfam PF08442 ATP-grasp domain 2 202 8.2E-78 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.669 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 PIRSF PIRSF001554 1 386 3.0E-150 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 Gene3D G3DSA:3.40.50.261 241 383 1.4E-63 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 SUPERFAMILY SSF52210 239 384 1.19E-52 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 PANTHER PTHR11815:SF1 1 386 1.2E-215 T 23-04-2016 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 PANTHER PTHR11815 1 386 1.2E-215 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CYCME_RS11540 f43a22e4dafaf5785473380f519a21dc 386 Gene3D G3DSA:3.30.470.20 94 239 8.4E-54 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS02420 c19f8ada32c850f25584e22278e07b6b 137 Pfam PF00472 RF-1 domain 6 132 1.3E-25 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CYCME_RS02420 c19f8ada32c850f25584e22278e07b6b 137 SUPERFAMILY SSF75620 7 119 5.1E-12 T 23-04-2016 CYCME_RS02420 c19f8ada32c850f25584e22278e07b6b 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CYCME_RS02420 c19f8ada32c850f25584e22278e07b6b 137 PANTHER PTHR11075 8 134 1.6E-33 T 23-04-2016 CYCME_RS02420 c19f8ada32c850f25584e22278e07b6b 137 Gene3D G3DSA:3.30.160.200 4 107 2.5E-32 T 23-04-2016 CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 2.8E-217 T 23-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 Gene3D G3DSA:3.90.180.10 2 190 2.4E-66 T 23-04-2016 IPR011032 GroES-like CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 SUPERFAMILY SSF51735 160 333 4.15E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 PANTHER PTHR11695 128 369 8.8E-204 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 PANTHER PTHR11695 15 108 8.8E-204 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 5.0E-24 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 SUPERFAMILY SSF50129 318 369 5.65E-11 T 23-04-2016 IPR011032 GroES-like CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 Gene3D G3DSA:3.40.50.720 191 309 2.1E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 PANTHER PTHR11695:SF560 128 369 8.8E-204 T 23-04-2016 CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 PANTHER PTHR11695:SF560 15 108 8.8E-204 T 23-04-2016 CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 SUPERFAMILY SSF50129 1 185 8.26E-71 T 23-04-2016 IPR011032 GroES-like CYCME_RS10650 765033d9c3a6fdcdf6a824e405986bf9 369 Pfam PF00107 Zinc-binding dehydrogenase 197 322 9.1E-26 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 14 288 8.4E-76 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 SUPERFAMILY SSF55060 169 285 3.31E-25 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 Gene3D G3DSA:3.30.70.890 170 287 5.3E-31 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 PANTHER PTHR20861:SF2 10 283 4.0E-81 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 PIRSF PIRSF010376 12 288 2.6E-77 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 Gene3D G3DSA:3.30.230.10 16 168 3.3E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 SUPERFAMILY SSF54211 14 166 2.66E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 14 280 29.17 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 PANTHER PTHR20861 10 283 4.0E-81 T 23-04-2016 CYCME_RS03540 c5eeb1eb6717427ff61ddbc0183f4910 297 Pfam PF00288 GHMP kinases N terminal domain 97 153 5.9E-8 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 Gene3D G3DSA:3.40.605.10 2 267 6.1E-85 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 PANTHER PTHR11699:SF213 1 486 2.4E-205 T 23-04-2016 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 PANTHER PTHR11699 1 486 2.4E-205 T 23-04-2016 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 Gene3D G3DSA:3.40.309.10 268 456 1.5E-63 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 4 486 6.7E-264 T 23-04-2016 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 SUPERFAMILY SSF53720 2 485 4.45E-157 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 Pfam PF00171 Aldehyde dehydrogenase family 15 482 1.3E-156 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CYCME_RS03280 b09b93b00d68d7cfce7c41f0b414bef8 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CYCME_RS09580 80eac9157139e0375defc3b3518fe8d6 403 SMART SM00852 11 177 6.4E-33 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS09580 80eac9157139e0375defc3b3518fe8d6 403 PANTHER PTHR13939 8 293 1.6E-74 T 23-04-2016 CYCME_RS09580 80eac9157139e0375defc3b3518fe8d6 403 Gene3D G3DSA:3.40.980.10 8 206 4.9E-29 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS09580 80eac9157139e0375defc3b3518fe8d6 403 SUPERFAMILY SSF53218 8 208 4.45E-34 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS09580 80eac9157139e0375defc3b3518fe8d6 403 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 8 171 1.5E-26 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS09580 80eac9157139e0375defc3b3518fe8d6 403 Pfam PF00994 Probable molybdopterin binding domain 12 175 4.9E-31 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS07485 6ac6438f553229de7d60970fa73a48da 148 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 138 2.4E-48 T 23-04-2016 CYCME_RS07485 6ac6438f553229de7d60970fa73a48da 148 Pfam PF01592 NifU-like N terminal domain 9 126 1.6E-24 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 CYCME_RS07485 6ac6438f553229de7d60970fa73a48da 148 Gene3D G3DSA:3.90.1010.10 8 139 1.3E-42 T 23-04-2016 CYCME_RS07485 6ac6438f553229de7d60970fa73a48da 148 PANTHER PTHR10093 1 136 2.0E-41 T 23-04-2016 CYCME_RS07485 6ac6438f553229de7d60970fa73a48da 148 SUPERFAMILY SSF82649 2 140 1.73E-48 T 23-04-2016 CYCME_RS07245 25e7cbaa4d76fe461b1c03e164997948 241 PANTHER PTHR34990:SF1 7 240 6.9E-85 T 23-04-2016 CYCME_RS07245 25e7cbaa4d76fe461b1c03e164997948 241 PANTHER PTHR34990 7 240 6.9E-85 T 23-04-2016 CYCME_RS07245 25e7cbaa4d76fe461b1c03e164997948 241 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 96.264 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 CYCME_RS07245 25e7cbaa4d76fe461b1c03e164997948 241 Pfam PF00149 Calcineurin-like phosphoesterase 5 201 9.1E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CYCME_RS07245 25e7cbaa4d76fe461b1c03e164997948 241 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 6 234 4.6E-84 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 CYCME_RS07245 25e7cbaa4d76fe461b1c03e164997948 241 Gene3D G3DSA:3.60.21.10 5 127 1.7E-19 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CYCME_RS07245 25e7cbaa4d76fe461b1c03e164997948 241 Gene3D G3DSA:3.60.21.10 175 222 1.7E-19 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CYCME_RS07245 25e7cbaa4d76fe461b1c03e164997948 241 SUPERFAMILY SSF56300 5 239 1.82E-27 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CYCME_RS00745 3a0fc67e584653840490e4a277303868 269 Gene3D G3DSA:3.40.50.1980 130 261 3.1E-15 T 23-04-2016 CYCME_RS00745 3a0fc67e584653840490e4a277303868 269 Pfam PF01497 Periplasmic binding protein 11 239 2.2E-39 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CYCME_RS00745 3a0fc67e584653840490e4a277303868 269 PANTHER PTHR30535 8 261 2.2E-42 T 23-04-2016 CYCME_RS00745 3a0fc67e584653840490e4a277303868 269 SUPERFAMILY SSF53807 8 261 1.33E-43 T 23-04-2016 CYCME_RS00745 3a0fc67e584653840490e4a277303868 269 Gene3D G3DSA:3.40.50.1980 9 127 6.7E-23 T 23-04-2016 CYCME_RS09170 6c3875eafc063b28cc87265528334c47 142 SUPERFAMILY SSF54995 1 100 7.19E-37 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS09170 6c3875eafc063b28cc87265528334c47 142 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 23-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS09170 6c3875eafc063b28cc87265528334c47 142 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.887 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS09170 6c3875eafc063b28cc87265528334c47 142 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.5E-35 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS09170 6c3875eafc063b28cc87265528334c47 142 Gene3D G3DSA:3.30.70.60 1 101 1.1E-40 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CYCME_RS09170 6c3875eafc063b28cc87265528334c47 142 PANTHER PTHR21011:SF1 1 134 7.0E-39 T 23-04-2016 CYCME_RS09170 6c3875eafc063b28cc87265528334c47 142 Pfam PF01250 Ribosomal protein S6 3 91 9.5E-28 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS09170 6c3875eafc063b28cc87265528334c47 142 PANTHER PTHR21011 1 134 7.0E-39 T 23-04-2016 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 1.2E-118 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 Gene3D G3DSA:3.50.30.10 370 468 2.2E-35 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 783 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 PANTHER PTHR22931:SF7 2 783 0.0 T 23-04-2016 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 Gene3D G3DSA:3.20.20.60 478 785 2.8E-106 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 691 706 8.6E-5 T 23-04-2016 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 744 756 8.6E-5 T 23-04-2016 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 708 723 8.6E-5 T 23-04-2016 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 SUPERFAMILY SSF56059 3 382 1.88E-107 T 23-04-2016 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 SUPERFAMILY SSF51621 459 787 1.62E-98 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 411 422 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 SUPERFAMILY SSF52009 345 464 2.49E-33 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 Gene3D G3DSA:3.30.470.20 196 352 4.8E-56 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 477 783 6.8E-63 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 PIRSF PIRSF000854 1 788 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 Pfam PF00391 PEP-utilising enzyme, mobile domain 381 452 1.2E-25 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 PANTHER PTHR22931 2 783 0.0 T 23-04-2016 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 691 709 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CYCME_RS04660 98163b7abec68edfe18027b02c679383 789 Gene3D G3DSA:3.30.1490.20 3 193 2.0E-67 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS05740 bf5366fd519de5d5c324fd6757093f33 236 Gene3D G3DSA:3.40.50.150 23 216 5.6E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS05740 bf5366fd519de5d5c324fd6757093f33 236 PANTHER PTHR10108:SF910 6 229 4.6E-108 T 23-04-2016 CYCME_RS05740 bf5366fd519de5d5c324fd6757093f33 236 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 38.012 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 CYCME_RS05740 bf5366fd519de5d5c324fd6757093f33 236 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 12 229 9.0E-86 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 CYCME_RS05740 bf5366fd519de5d5c324fd6757093f33 236 PANTHER PTHR10108 6 229 4.6E-108 T 23-04-2016 CYCME_RS05740 bf5366fd519de5d5c324fd6757093f33 236 SUPERFAMILY SSF53335 14 232 2.92E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS05740 bf5366fd519de5d5c324fd6757093f33 236 Pfam PF13489 Methyltransferase domain 49 203 2.7E-25 T 23-04-2016 CYCME_RS05950 9d5be6b91643abf5ee8b48df72ae57d8 284 PIRSF PIRSF015582 1 284 1.3E-72 T 23-04-2016 IPR011206 Citrate lyase beta subunit-like CYCME_RS05950 9d5be6b91643abf5ee8b48df72ae57d8 284 PANTHER PTHR32308:SF0 9 279 7.0E-81 T 23-04-2016 CYCME_RS05950 9d5be6b91643abf5ee8b48df72ae57d8 284 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 220 1.4E-45 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CYCME_RS05950 9d5be6b91643abf5ee8b48df72ae57d8 284 PANTHER PTHR32308 9 279 7.0E-81 T 23-04-2016 IPR011206 Citrate lyase beta subunit-like CYCME_RS05950 9d5be6b91643abf5ee8b48df72ae57d8 284 Gene3D G3DSA:3.20.20.60 5 232 4.2E-68 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS05950 9d5be6b91643abf5ee8b48df72ae57d8 284 SUPERFAMILY SSF51621 4 232 4.89E-56 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 PANTHER PTHR13693:SF53 6 384 5.0E-169 T 23-04-2016 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 235 244 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 Gene3D G3DSA:3.90.1150.10 272 377 1.2E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 Pfam PF00155 Aminotransferase class I and II 42 377 4.3E-59 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 384 45.349 T 23-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 PANTHER PTHR13693 6 384 5.0E-169 T 23-04-2016 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 Gene3D G3DSA:3.40.640.10 57 271 1.3E-83 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 19 377 6.0E-141 T 23-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 CYCME_RS03080 d52adc246cf478b2f7484dd6a1f835bd 385 SUPERFAMILY SSF53383 5 382 2.02E-102 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS12165 f401ffc01e356fbb4696fe829011e1de 144 PANTHER PTHR35011 1 134 7.8E-24 T 23-04-2016 CYCME_RS12165 f401ffc01e356fbb4696fe829011e1de 144 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 1 135 1.2E-21 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CYCME_RS12165 f401ffc01e356fbb4696fe829011e1de 144 PANTHER PTHR35011:SF4 1 134 7.8E-24 T 23-04-2016 CYCME_RS06625 00f2ac0d5a9e20460ed2b66b6e68c35e 129 Pfam PF00571 CBS domain 71 121 7.3E-11 T 23-04-2016 IPR000644 CBS domain CYCME_RS06625 00f2ac0d5a9e20460ed2b66b6e68c35e 129 Pfam PF00571 CBS domain 3 56 5.5E-7 T 23-04-2016 IPR000644 CBS domain CYCME_RS06625 00f2ac0d5a9e20460ed2b66b6e68c35e 129 SMART SM00116 10 58 0.11 T 23-04-2016 IPR000644 CBS domain CYCME_RS06625 00f2ac0d5a9e20460ed2b66b6e68c35e 129 SMART SM00116 76 123 0.0035 T 23-04-2016 IPR000644 CBS domain CYCME_RS06625 00f2ac0d5a9e20460ed2b66b6e68c35e 129 SUPERFAMILY SSF54631 1 120 1.52E-24 T 23-04-2016 CYCME_RS06625 00f2ac0d5a9e20460ed2b66b6e68c35e 129 PANTHER PTHR11911 1 119 3.5E-17 T 23-04-2016 CYCME_RS06625 00f2ac0d5a9e20460ed2b66b6e68c35e 129 Gene3D G3DSA:3.10.580.10 2 120 6.2E-26 T 23-04-2016 CYCME_RS11075 62f5f582a03c36aec6beeb9ef0152502 303 Gene3D G3DSA:2.70.70.10 163 299 4.8E-49 T 23-04-2016 CYCME_RS11075 62f5f582a03c36aec6beeb9ef0152502 303 Pfam PF01551 Peptidase family M23 201 295 3.9E-33 T 23-04-2016 IPR016047 Peptidase M23 CYCME_RS11075 62f5f582a03c36aec6beeb9ef0152502 303 SUPERFAMILY SSF51261 160 299 1.31E-56 T 23-04-2016 IPR011055 Duplicated hybrid motif CYCME_RS11075 62f5f582a03c36aec6beeb9ef0152502 303 PANTHER PTHR21666 179 299 5.8E-49 T 23-04-2016 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 547 1.9E-50 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 Gene3D G3DSA:3.50.50.60 6 282 1.5E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 SUPERFAMILY SSF51905 307 448 2.07E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 SUPERFAMILY SSF51905 1 211 2.07E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 SUPERFAMILY SSF54373 211 306 3.14E-36 T 23-04-2016 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 4.3E-6 T 23-04-2016 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 PANTHER PTHR10617:SF107 1 473 2.3E-252 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 PANTHER PTHR10617 1 473 2.3E-252 T 23-04-2016 CYCME_RS06030 44374ff1476de2163844876bb0663ce0 550 SUPERFAMILY SSF54862 450 550 2.1E-28 T 23-04-2016 CYCME_RS12180 92d9075c235b8094e87d9bbce2312bd1 532 PIRSF PIRSF004567 5 531 2.6E-179 T 23-04-2016 IPR016421 Transposition, TnsE CYCME_RS01100 92d9075c235b8094e87d9bbce2312bd1 532 PIRSF PIRSF004567 5 531 2.6E-179 T 23-04-2016 IPR016421 Transposition, TnsE CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 Pfam PF13519 von Willebrand factor type A domain 95 202 1.7E-16 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 Gene3D G3DSA:1.25.40.10 534 557 4.5E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 Gene3D G3DSA:1.25.40.10 355 453 4.5E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 PANTHER PTHR22550 3 528 1.6E-51 T 23-04-2016 CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 SMART SM00327 92 286 6.0E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 SUPERFAMILY SSF48452 356 452 1.19E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 Gene3D G3DSA:3.40.50.410 94 283 5.8E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 PANTHER PTHR22550:SF5 3 528 1.6E-51 T 23-04-2016 CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 Pfam PF00515 Tetratricopeptide repeat 403 436 4.9E-9 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 SMART SM00028 403 436 1.8E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS07785 6a748122e9b4bdf56564837fe73f3c4e 581 SUPERFAMILY SSF53300 93 282 3.02E-19 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS04845 bf1507f89df2a26ab9409f353f4b43dd 373 PANTHER PTHR30408 13 199 3.1E-28 T 23-04-2016 CYCME_RS04845 bf1507f89df2a26ab9409f353f4b43dd 373 SUPERFAMILY SSF116734 179 371 2.13E-23 T 23-04-2016 CYCME_RS04845 bf1507f89df2a26ab9409f353f4b43dd 373 SUPERFAMILY SSF116734 2 121 3.27E-23 T 23-04-2016 CYCME_RS04845 bf1507f89df2a26ab9409f353f4b43dd 373 PANTHER PTHR30408:SF7 13 199 3.1E-28 T 23-04-2016 CYCME_RS04845 bf1507f89df2a26ab9409f353f4b43dd 373 Pfam PF01420 Type I restriction modification DNA specificity domain 187 318 5.6E-8 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CYCME_RS04845 bf1507f89df2a26ab9409f353f4b43dd 373 Pfam PF01420 Type I restriction modification DNA specificity domain 7 105 5.0E-12 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CYCME_RS02460 602e4bc4557fcf8cfb1387eb9f6713a9 192 Gene3D G3DSA:3.30.70.1070 114 190 2.7E-21 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS02460 602e4bc4557fcf8cfb1387eb9f6713a9 192 SUPERFAMILY SSF110997 115 190 3.4E-16 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS02460 602e4bc4557fcf8cfb1387eb9f6713a9 192 Pfam PF05036 Sporulation related domain 115 190 1.5E-15 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS08305 17f02b4cc0d544aeff52a36a990329a3 477 Gene3D G3DSA:3.40.1160.10 129 310 2.6E-23 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS08305 17f02b4cc0d544aeff52a36a990329a3 477 Gene3D G3DSA:3.40.1160.10 3 50 2.6E-23 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS08305 17f02b4cc0d544aeff52a36a990329a3 477 SUPERFAMILY SSF55021 401 468 1.04E-14 T 23-04-2016 CYCME_RS08305 17f02b4cc0d544aeff52a36a990329a3 477 Pfam PF13840 ACT domain 400 460 3.4E-8 T 23-04-2016 IPR027795 GATS-like ACT domain CYCME_RS08305 17f02b4cc0d544aeff52a36a990329a3 477 PANTHER PTHR21499 1 475 1.1E-58 T 23-04-2016 CYCME_RS08305 17f02b4cc0d544aeff52a36a990329a3 477 SUPERFAMILY SSF53633 2 310 8.22E-55 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS08305 17f02b4cc0d544aeff52a36a990329a3 477 Pfam PF00696 Amino acid kinase family 3 296 2.3E-27 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS08305 17f02b4cc0d544aeff52a36a990329a3 477 PANTHER PTHR21499:SF3 1 475 1.1E-58 T 23-04-2016 CYCME_RS09440 e97c04eb25e57478b6fd6a86fe71ba63 138 SUPERFAMILY SSF54427 6 123 8.11E-22 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS09440 e97c04eb25e57478b6fd6a86fe71ba63 138 Pfam PF12680 SnoaL-like domain 8 107 2.6E-11 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain CYCME_RS09440 e97c04eb25e57478b6fd6a86fe71ba63 138 Gene3D G3DSA:3.10.450.50 6 127 2.5E-16 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS02950 d636545905492f2f49f2343ab6def716 137 Gene3D G3DSA:3.40.30.10 3 133 1.6E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02950 d636545905492f2f49f2343ab6def716 137 PANTHER PTHR10681 3 123 1.7E-20 T 23-04-2016 CYCME_RS02950 d636545905492f2f49f2343ab6def716 137 SUPERFAMILY SSF52833 3 130 8.87E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02950 d636545905492f2f49f2343ab6def716 137 Pfam PF00578 AhpC/TSA family 3 116 1.0E-20 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CYCME_RS02950 d636545905492f2f49f2343ab6def716 137 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 SUPERFAMILY SSF50621 233 384 1.09E-30 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 PANTHER PTHR11482:SF38 7 396 1.2E-169 T 23-04-2016 CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 SUPERFAMILY SSF51419 24 264 7.29E-38 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 14 395 3.3E-139 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 370 3.0E-11 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 PIRSF PIRSF038941 4 396 8.3E-166 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 Gene3D G3DSA:3.20.20.10 40 256 2.2E-17 T 23-04-2016 IPR029066 PLP-binding barrel CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 Gene3D G3DSA:2.40.37.10 257 373 1.6E-23 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CYCME_RS04810 909553edcbf4d26ccb4b548bf77b7277 396 PANTHER PTHR11482 7 396 1.2E-169 T 23-04-2016 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 116 9.7E-11 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 SUPERFAMILY SSF51735 2 153 4.86E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 129 266 3.2E-67 T 23-04-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 SUPERFAMILY SSF55347 129 267 1.5E-61 T 23-04-2016 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 Gene3D G3DSA:3.40.50.720 3 141 5.0E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 Gene3D G3DSA:3.30.360.10 142 266 1.4E-68 T 23-04-2016 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 290 5.1E-143 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 PANTHER PTHR41706 1 298 9.8E-121 T 23-04-2016 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 SMART SM00859 4 119 6.6E-5 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 PIRSF PIRSF015689 1 296 7.8E-134 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CYCME_RS10225 c13e1923cefc373bbe33849299ece8ac 301 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 301 142.851 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CYCME_RS11365 ee5ebdf7c2c54334c91d955806e0533f 257 Gene3D G3DSA:1.20.1260.10 10 238 1.2E-22 T 23-04-2016 IPR012347 Ferritin-related CYCME_RS11365 ee5ebdf7c2c54334c91d955806e0533f 257 Pfam PF05138 Phenylacetic acid catabolic protein 14 215 2.1E-15 T 23-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 CYCME_RS11365 ee5ebdf7c2c54334c91d955806e0533f 257 SUPERFAMILY SSF47240 16 216 3.16E-21 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 Gene3D G3DSA:3.40.50.150 3 192 5.4E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 Gene3D G3DSA:1.10.8.100 198 259 3.5E-24 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 SUPERFAMILY SSF53335 3 258 7.16E-76 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 6 258 3.6E-86 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 SMART SM00650 21 192 5.3E-76 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 PANTHER PTHR11727 5 260 1.6E-89 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 5 259 55.131 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 37 64 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CYCME_RS03400 02b7f6f6913a996cee0e408406e62cd0 261 Pfam PF00398 Ribosomal RNA adenine dimethylase 5 258 4.8E-63 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 PANTHER PTHR21152 1 357 4.4E-178 T 23-04-2016 CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 PIRSF PIRSF000525 1 360 7.4E-152 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 51.107 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 Gene3D G3DSA:3.40.640.10 17 257 1.8E-108 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 3.0E-158 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 PANTHER PTHR21152:SF1 1 357 4.4E-178 T 23-04-2016 CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 Gene3D G3DSA:3.90.1150.10 258 358 6.2E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 SUPERFAMILY SSF53383 1 357 2.22E-117 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS09290 18c815579d6fb7cad90e65a978bca451 360 Pfam PF00266 Aminotransferase class-V 4 348 2.2E-59 T 23-04-2016 IPR000192 Aminotransferase class V domain CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 23-04-2016 IPR019808 Histidine triad, conserved site CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 PRINTS PR00332 Histidine triad family signature 5 21 1.0E-18 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 PRINTS PR00332 Histidine triad family signature 26 44 1.0E-18 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 PRINTS PR00332 Histidine triad family signature 94 104 1.0E-18 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 Pfam PF01230 HIT domain 12 108 1.3E-28 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 PANTHER PTHR23089:SF2 3 114 5.9E-52 T 23-04-2016 CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 SUPERFAMILY SSF54197 1 113 3.4E-39 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 PANTHER PTHR23089 3 114 5.9E-52 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CYCME_RS04410 73405718903e1827f2f23c5c700b33a5 114 Gene3D G3DSA:3.30.428.10 2 114 5.0E-43 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CYCME_RS01345 82c7598d0659fe3de607e30441dcba1b 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 187 36.389 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 CYCME_RS01345 82c7598d0659fe3de607e30441dcba1b 187 Gene3D G3DSA:3.30.70.1300 45 130 2.4E-29 T 23-04-2016 CYCME_RS01345 82c7598d0659fe3de607e30441dcba1b 187 Pfam PF02622 Uncharacterized ACR, COG1678 16 174 3.1E-49 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 CYCME_RS01345 82c7598d0659fe3de607e30441dcba1b 187 Gene3D G3DSA:3.40.1740.10 131 177 3.0E-33 T 23-04-2016 CYCME_RS01345 82c7598d0659fe3de607e30441dcba1b 187 Gene3D G3DSA:3.40.1740.10 1 44 3.0E-33 T 23-04-2016 CYCME_RS01345 82c7598d0659fe3de607e30441dcba1b 187 PANTHER PTHR30327 1 186 2.9E-56 T 23-04-2016 CYCME_RS01345 82c7598d0659fe3de607e30441dcba1b 187 PANTHER PTHR30327:SF1 1 186 2.9E-56 T 23-04-2016 CYCME_RS01345 82c7598d0659fe3de607e30441dcba1b 187 SUPERFAMILY SSF143456 6 186 2.35E-62 T 23-04-2016 CYCME_RS00925 a5ecda32b81cb2d3bd25d19f2c79ec1d 417 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 2 415 2.1E-97 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CYCME_RS00925 a5ecda32b81cb2d3bd25d19f2c79ec1d 417 PANTHER PTHR30026 1 415 1.4E-99 T 23-04-2016 CYCME_RS00925 a5ecda32b81cb2d3bd25d19f2c79ec1d 417 Gene3D G3DSA:1.20.1600.10 3 407 1.5E-69 T 23-04-2016 CYCME_RS00925 a5ecda32b81cb2d3bd25d19f2c79ec1d 417 PANTHER PTHR30026:SF3 1 415 1.4E-99 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CYCME_RS00925 a5ecda32b81cb2d3bd25d19f2c79ec1d 417 Pfam PF02321 Outer membrane efflux protein 2 188 1.4E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS00925 a5ecda32b81cb2d3bd25d19f2c79ec1d 417 Pfam PF02321 Outer membrane efflux protein 216 397 7.7E-31 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS00925 a5ecda32b81cb2d3bd25d19f2c79ec1d 417 SUPERFAMILY SSF56954 3 415 1.01E-77 T 23-04-2016 CYCME_RS07610 9e1595c7b99e0c4c5f7a89b1ba080025 277 SUPERFAMILY SSF51569 2 269 1.37E-107 T 23-04-2016 CYCME_RS07610 9e1595c7b99e0c4c5f7a89b1ba080025 277 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 53.016 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CYCME_RS07610 9e1595c7b99e0c4c5f7a89b1ba080025 277 PANTHER PTHR21057 5 277 1.7E-160 T 23-04-2016 CYCME_RS07610 9e1595c7b99e0c4c5f7a89b1ba080025 277 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 268 4.6E-125 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CYCME_RS07610 9e1595c7b99e0c4c5f7a89b1ba080025 277 PANTHER PTHR21057:SF2 5 277 1.7E-160 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CYCME_RS07610 9e1595c7b99e0c4c5f7a89b1ba080025 277 Pfam PF00793 DAHP synthetase I family 8 268 5.2E-71 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CYCME_RS07610 9e1595c7b99e0c4c5f7a89b1ba080025 277 Gene3D G3DSA:3.20.20.70 11 270 1.3E-116 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09045 50857c11002586cbc7200d6cb449153d 259 PANTHER PTHR11907:SF10 1 251 1.1E-103 T 23-04-2016 CYCME_RS09045 50857c11002586cbc7200d6cb449153d 259 Gene3D G3DSA:3.60.20.10 1 250 6.8E-61 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS09045 50857c11002586cbc7200d6cb449153d 259 SUPERFAMILY SSF56235 2 250 2.32E-44 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS09045 50857c11002586cbc7200d6cb449153d 259 Pfam PF13230 Glutamine amidotransferases class-II 1 255 1.6E-108 T 23-04-2016 IPR026869 Putative glutamine amidotransferase type 2 CYCME_RS09045 50857c11002586cbc7200d6cb449153d 259 PANTHER PTHR11907 1 251 1.1E-103 T 23-04-2016 CYCME_RS10555 8c99ce9916c8f200b200e8bd39db683c 233 PANTHER PTHR30625 1 226 1.9E-67 T 23-04-2016 CYCME_RS10555 8c99ce9916c8f200b200e8bd39db683c 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 208 3.5E-42 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CYCME_RS10555 8c99ce9916c8f200b200e8bd39db683c 233 PANTHER PTHR30625:SF3 1 226 1.9E-67 T 23-04-2016 CYCME_RS10555 8c99ce9916c8f200b200e8bd39db683c 233 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 3.2E-89 T 23-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CYCME_RS12120 2fd3a6964d8201cca11401c3eda461c8 662 Pfam PF05140 ResB-like family 26 649 2.1E-145 T 23-04-2016 IPR007816 ResB-like domain CYCME_RS12120 2fd3a6964d8201cca11401c3eda461c8 662 PANTHER PTHR31566:SF0 221 411 7.6E-44 T 23-04-2016 CYCME_RS12120 2fd3a6964d8201cca11401c3eda461c8 662 PANTHER PTHR31566:SF0 533 652 7.6E-44 T 23-04-2016 CYCME_RS12120 2fd3a6964d8201cca11401c3eda461c8 662 PANTHER PTHR31566:SF0 19 190 7.6E-44 T 23-04-2016 CYCME_RS12120 2fd3a6964d8201cca11401c3eda461c8 662 PANTHER PTHR31566 221 411 7.6E-44 T 23-04-2016 CYCME_RS12120 2fd3a6964d8201cca11401c3eda461c8 662 PANTHER PTHR31566 533 652 7.6E-44 T 23-04-2016 CYCME_RS12120 2fd3a6964d8201cca11401c3eda461c8 662 PANTHER PTHR31566 19 190 7.6E-44 T 23-04-2016 CYCME_RS09560 d816436c9df539b721cad1ef4cc64b89 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 1.0E-17 T 23-04-2016 IPR012451 Protein of unknown function DUF1656 CYCME_RS04585 739d2e99ac75a0c4f8c79068b055be2b 97 SUPERFAMILY SSF160544 4 84 6.67E-22 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CYCME_RS04585 739d2e99ac75a0c4f8c79068b055be2b 97 Gene3D G3DSA:3.40.1690.10 4 83 2.0E-21 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CYCME_RS04585 739d2e99ac75a0c4f8c79068b055be2b 97 PANTHER PTHR30531 4 95 1.7E-29 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS04585 739d2e99ac75a0c4f8c79068b055be2b 97 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 80 3.4E-19 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS05795 5d3286c8a986b1b699636d28a13aec0e 344 SUPERFAMILY SSF56645 2 90 6.77E-8 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS05795 5d3286c8a986b1b699636d28a13aec0e 344 SUPERFAMILY SSF47203 193 325 2.9E-24 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05795 5d3286c8a986b1b699636d28a13aec0e 344 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 195 304 2.1E-14 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05795 5d3286c8a986b1b699636d28a13aec0e 344 PANTHER PTHR10909:SF302 194 305 1.1E-14 T 23-04-2016 CYCME_RS05795 5d3286c8a986b1b699636d28a13aec0e 344 Gene3D G3DSA:1.10.540.10 10 85 1.8E-8 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05795 5d3286c8a986b1b699636d28a13aec0e 344 PANTHER PTHR10909 194 305 1.1E-14 T 23-04-2016 CYCME_RS05795 5d3286c8a986b1b699636d28a13aec0e 344 Gene3D G3DSA:1.20.140.10 198 307 5.6E-19 T 23-04-2016 CYCME_RS06855 47a7408761a945eadaebe35b538cd1bb 410 Gene3D G3DSA:3.40.50.2000 219 379 5.5E-22 T 23-04-2016 CYCME_RS06855 47a7408761a945eadaebe35b538cd1bb 410 PANTHER PTHR12526 94 407 1.4E-54 T 23-04-2016 CYCME_RS06855 47a7408761a945eadaebe35b538cd1bb 410 PANTHER PTHR12526 1 58 1.4E-54 T 23-04-2016 CYCME_RS06855 47a7408761a945eadaebe35b538cd1bb 410 SUPERFAMILY SSF53756 15 405 7.63E-68 T 23-04-2016 CYCME_RS06855 47a7408761a945eadaebe35b538cd1bb 410 Pfam PF00534 Glycosyl transferases group 1 214 381 2.6E-34 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CYCME_RS06855 47a7408761a945eadaebe35b538cd1bb 410 Pfam PF13439 Glycosyltransferase Family 4 16 207 2.7E-8 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CYCME_RS06535 4151fcdd8ed63b292ded1b44c8bfaecf 579 Pfam PF03239 Iron permease FTR1 family 348 508 2.0E-13 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CYCME_RS06535 4151fcdd8ed63b292ded1b44c8bfaecf 579 PANTHER PTHR31632 382 532 1.0E-29 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CYCME_RS06535 4151fcdd8ed63b292ded1b44c8bfaecf 579 SUPERFAMILY SSF46626 132 226 3.87E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06535 4151fcdd8ed63b292ded1b44c8bfaecf 579 Gene3D G3DSA:1.10.760.10 144 227 9.3E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06535 4151fcdd8ed63b292ded1b44c8bfaecf 579 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 144 222 3.4E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06535 4151fcdd8ed63b292ded1b44c8bfaecf 579 PANTHER PTHR31632:SF4 382 532 1.0E-29 T 23-04-2016 CYCME_RS00220 821c65ab7ad1b4a0dbef1bc814ce9035 204 PANTHER PTHR10108 7 185 5.4E-62 T 23-04-2016 CYCME_RS00220 821c65ab7ad1b4a0dbef1bc814ce9035 204 Gene3D G3DSA:3.40.50.150 12 162 2.3E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS00220 821c65ab7ad1b4a0dbef1bc814ce9035 204 PANTHER PTHR10108:SF831 7 185 5.4E-62 T 23-04-2016 CYCME_RS00220 821c65ab7ad1b4a0dbef1bc814ce9035 204 SUPERFAMILY SSF53335 6 191 3.11E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS00220 821c65ab7ad1b4a0dbef1bc814ce9035 204 Pfam PF07021 Methionine biosynthesis protein MetW 5 197 1.1E-79 T 23-04-2016 IPR010743 Methionine biosynthesis MetW CYCME_RS00220 821c65ab7ad1b4a0dbef1bc814ce9035 204 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 5 197 5.5E-79 T 23-04-2016 IPR010743 Methionine biosynthesis MetW CYCME_RS09270 d5bf1a7ecbf4e25b2fb5d431c2b70f06 289 PANTHER PTHR21363:SF0 7 288 4.6E-64 T 23-04-2016 CYCME_RS09270 d5bf1a7ecbf4e25b2fb5d431c2b70f06 289 PANTHER PTHR21363 7 288 4.6E-64 T 23-04-2016 CYCME_RS09270 d5bf1a7ecbf4e25b2fb5d431c2b70f06 289 Gene3D G3DSA:3.40.50.720 1 181 3.9E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09270 d5bf1a7ecbf4e25b2fb5d431c2b70f06 289 Pfam PF02153 Prephenate dehydrogenase 17 274 4.5E-72 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CYCME_RS09270 d5bf1a7ecbf4e25b2fb5d431c2b70f06 289 SUPERFAMILY SSF48179 175 283 1.36E-31 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS09270 d5bf1a7ecbf4e25b2fb5d431c2b70f06 289 SUPERFAMILY SSF51735 4 171 1.13E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09270 d5bf1a7ecbf4e25b2fb5d431c2b70f06 289 Gene3D G3DSA:1.10.3660.10 222 278 1.6E-5 T 23-04-2016 CYCME_RS07325 c0bd72509228cdc031a61d60fdbea818 162 Pfam PF02674 Colicin V production protein 4 144 9.9E-36 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CYCME_RS07325 c0bd72509228cdc031a61d60fdbea818 162 PANTHER PTHR36926:SF1 1 162 6.2E-52 T 23-04-2016 CYCME_RS07325 c0bd72509228cdc031a61d60fdbea818 162 PANTHER PTHR36926 1 162 6.2E-52 T 23-04-2016 CYCME_RS09345 ac20c62876db8b325a3a66bec2e9f590 337 SUPERFAMILY SSF48179 185 334 2.99E-10 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS09345 ac20c62876db8b325a3a66bec2e9f590 337 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 7 334 3.5E-43 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS09345 ac20c62876db8b325a3a66bec2e9f590 337 PANTHER PTHR21708 1 337 3.0E-30 T 23-04-2016 CYCME_RS09345 ac20c62876db8b325a3a66bec2e9f590 337 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 185 333 2.7E-15 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS09345 ac20c62876db8b325a3a66bec2e9f590 337 SUPERFAMILY SSF51735 7 178 3.51E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09345 ac20c62876db8b325a3a66bec2e9f590 337 Gene3D G3DSA:3.40.50.720 3 181 8.2E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09345 ac20c62876db8b325a3a66bec2e9f590 337 Gene3D G3DSA:1.10.1040.10 185 333 2.8E-14 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS09345 ac20c62876db8b325a3a66bec2e9f590 337 Pfam PF02558 Ketopantoate reductase PanE/ApbA 7 148 1.4E-28 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 Gene3D G3DSA:3.90.380.10 126 429 1.6E-98 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 Pfam PF00355 Rieske [2Fe-2S] domain 38 121 1.9E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 PANTHER PTHR21266:SF30 17 219 3.2E-66 T 23-04-2016 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 22 47 1.2E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 52 67 1.2E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 177 199 1.2E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 1.2E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 73 93 1.2E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 137 163 1.2E-53 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 Gene3D G3DSA:2.102.10.10 26 120 2.5E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 PANTHER PTHR21266 17 219 3.2E-66 T 23-04-2016 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 SUPERFAMILY SSF50022 9 153 1.83E-46 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 158 422 5.4E-29 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 SUPERFAMILY SSF55961 153 432 1.18E-67 T 23-04-2016 CYCME_RS07875 54cb72c57fe4e2ba900a66f5601e00a9 442 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 80 103 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS06815 6e72f43bbe616a473ad758695205fdd2 295 Gene3D G3DSA:3.40.50.720 2 198 6.0E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06815 6e72f43bbe616a473ad758695205fdd2 295 PANTHER PTHR10491:SF4 1 295 2.0E-98 T 23-04-2016 CYCME_RS06815 6e72f43bbe616a473ad758695205fdd2 295 PANTHER PTHR10491 1 295 2.0E-98 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family CYCME_RS06815 6e72f43bbe616a473ad758695205fdd2 295 Gene3D G3DSA:3.90.25.10 222 274 2.3E-32 T 23-04-2016 CYCME_RS06815 6e72f43bbe616a473ad758695205fdd2 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 289 2.1E-94 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family CYCME_RS06815 6e72f43bbe616a473ad758695205fdd2 295 Pfam PF04321 RmlD substrate binding domain 4 290 3.2E-102 T 23-04-2016 IPR029903 RmlD-like substrate binding domain CYCME_RS06815 6e72f43bbe616a473ad758695205fdd2 295 SUPERFAMILY SSF51735 4 290 2.99E-94 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS11895 1147b21715a5019ee87cb83233b9d84f 465 PANTHER PTHR23510:SF6 15 406 1.5E-136 T 23-04-2016 CYCME_RS11895 1147b21715a5019ee87cb83233b9d84f 465 Gene3D G3DSA:1.20.1250.20 20 196 3.5E-32 T 23-04-2016 CYCME_RS11895 1147b21715a5019ee87cb83233b9d84f 465 Gene3D G3DSA:1.20.1250.20 215 399 1.8E-22 T 23-04-2016 CYCME_RS11895 1147b21715a5019ee87cb83233b9d84f 465 Pfam PF07690 Major Facilitator Superfamily 26 358 1.7E-39 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CYCME_RS11895 1147b21715a5019ee87cb83233b9d84f 465 PANTHER PTHR23510 15 406 1.5E-136 T 23-04-2016 CYCME_RS11895 1147b21715a5019ee87cb83233b9d84f 465 SUPERFAMILY SSF103473 11 396 1.7E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PANTHER PTHR24322:SF211 3 132 1.9E-64 T 23-04-2016 CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.0E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.0E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.0E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PANTHER PTHR24322:SF211 148 183 1.9E-64 T 23-04-2016 CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PANTHER PTHR24322 3 132 1.9E-64 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 PANTHER PTHR24322 148 183 1.9E-64 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 Gene3D G3DSA:3.40.50.720 1 236 9.1E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 SUPERFAMILY SSF51735 1 236 1.8E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS00480 4b3c8c5b296888d1e1f26640f0790337 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 5 233 6.1E-52 T 23-04-2016 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 Gene3D G3DSA:3.40.50.720 1 199 5.5E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 Gene3D G3DSA:3.40.50.720 287 390 5.4E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 PANTHER PTHR11374 1 366 8.4E-207 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 PIRSF PIRSF000124 1 391 1.7E-129 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 PANTHER PTHR11374:SF17 1 366 8.4E-207 T 23-04-2016 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 PIRSF PIRSF500134 1 349 6.2E-113 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 SUPERFAMILY SSF48179 193 289 1.04E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 SUPERFAMILY SSF52413 285 390 8.37E-27 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 374 3.9E-100 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 SMART SM00984 302 389 3.3E-12 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 194 283 2.1E-27 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 8.6E-31 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 SUPERFAMILY SSF51735 1 195 7.45E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 303 372 2.6E-7 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS01185 de20de6e3d75f6be6580a7dadd27a16c 391 Gene3D G3DSA:1.10.1040.10 200 286 6.7E-36 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 Gene3D G3DSA:2.170.130.10 49 137 3.0E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 135 1.1E-7 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 SUPERFAMILY SSF56935 48 705 3.77E-71 T 23-04-2016 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 PANTHER PTHR32552 51 406 1.6E-20 T 23-04-2016 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 PANTHER PTHR32552 423 705 1.6E-20 T 23-04-2016 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 PANTHER PTHR32552:SF12 51 406 1.6E-20 T 23-04-2016 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 PANTHER PTHR32552:SF12 423 705 1.6E-20 T 23-04-2016 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 Pfam PF00593 TonB dependent receptor 441 704 9.1E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 Gene3D G3DSA:2.40.170.20 138 390 2.4E-62 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS02635 78f85af824d349c1e035d6746a06e3c6 705 Gene3D G3DSA:2.40.170.20 425 705 2.4E-62 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS03960 bc716abd2003611f862aa676e55f053c 1269 Pfam PF13116 Protein of unknown function 490 759 4.2E-56 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 CYCME_RS03960 bc716abd2003611f862aa676e55f053c 1269 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 4 1234 1.1E-209 T 23-04-2016 IPR011836 Conserved hypothetical protein CHP02099 CYCME_RS03960 bc716abd2003611f862aa676e55f053c 1269 Pfam PF13502 AsmA-like C-terminal region 987 1229 3.0E-49 T 23-04-2016 IPR032712 AsmA-like, C-terminal CYCME_RS03960 bc716abd2003611f862aa676e55f053c 1269 PANTHER PTHR38690 3 1248 1.7E-170 T 23-04-2016 CYCME_RS03855 088f46b3948c88760e54531bdafef0b7 317 Pfam PF02239 Cytochrome D1 heme domain 65 150 7.4E-8 T 23-04-2016 CYCME_RS03855 088f46b3948c88760e54531bdafef0b7 317 PANTHER PTHR13833 274 316 8.5E-32 T 23-04-2016 CYCME_RS03855 088f46b3948c88760e54531bdafef0b7 317 PANTHER PTHR13833 15 181 8.5E-32 T 23-04-2016 CYCME_RS03855 088f46b3948c88760e54531bdafef0b7 317 Gene3D G3DSA:2.130.10.10 16 316 9.0E-68 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS03855 088f46b3948c88760e54531bdafef0b7 317 SUPERFAMILY SSF50974 13 316 2.22E-73 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal CYCME_RS03855 088f46b3948c88760e54531bdafef0b7 317 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 100 141 1.2E-13 T 23-04-2016 IPR011964 YVTN beta-propeller repeat CYCME_RS03855 088f46b3948c88760e54531bdafef0b7 317 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 276 316 2.4E-15 T 23-04-2016 IPR011964 YVTN beta-propeller repeat CYCME_RS03855 088f46b3948c88760e54531bdafef0b7 317 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 11 316 1.5E-137 T 23-04-2016 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein CYCME_RS11080 7ccd686c9e141ffd0d792f0f2d761783 146 Pfam PF05258 Protein of unknown function (DUF721) 18 92 8.4E-10 T 23-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 CYCME_RS07815 4c51774a612658915f0d4eee0a99a6ab 102 SUPERFAMILY SSF161098 13 90 1.8E-5 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS07815 4c51774a612658915f0d4eee0a99a6ab 102 Gene3D G3DSA:1.10.3720.10 10 83 3.4E-4 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS04130 add75d453b6f6a79ac7b4be05cdff4c0 241 Pfam PF13649 Methyltransferase domain 65 154 5.0E-9 T 23-04-2016 CYCME_RS04130 add75d453b6f6a79ac7b4be05cdff4c0 241 SUPERFAMILY SSF53335 37 225 4.56E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04130 add75d453b6f6a79ac7b4be05cdff4c0 241 Gene3D G3DSA:3.40.50.150 59 230 1.8E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04655 7deb3550786d4ecff757ae323ec809ca 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CYCME_RS04655 7deb3550786d4ecff757ae323ec809ca 393 Gene3D G3DSA:3.90.1150.10 268 376 2.4E-36 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS04655 7deb3550786d4ecff757ae323ec809ca 393 SUPERFAMILY SSF53383 9 375 2.59E-101 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS04655 7deb3550786d4ecff757ae323ec809ca 393 PIRSF PIRSF000524 4 392 3.8E-118 T 23-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CYCME_RS04655 7deb3550786d4ecff757ae323ec809ca 393 Pfam PF00266 Aminotransferase class-V 13 341 1.5E-35 T 23-04-2016 IPR000192 Aminotransferase class V domain CYCME_RS04655 7deb3550786d4ecff757ae323ec809ca 393 Gene3D G3DSA:3.40.640.10 22 267 4.5E-58 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS04655 7deb3550786d4ecff757ae323ec809ca 393 PANTHER PTHR21152 1 375 4.5E-120 T 23-04-2016 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 SUPERFAMILY SSF101801 250 325 2.88E-12 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 PANTHER PTHR30034:SF0 4 335 5.3E-134 T 23-04-2016 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 PANTHER PTHR30034 4 335 5.3E-134 T 23-04-2016 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 SUPERFAMILY SSF103039 7 15 3.66E-20 T 23-04-2016 IPR028976 CheC-like domain CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 SUPERFAMILY SSF103039 57 233 3.66E-20 T 23-04-2016 IPR028976 CheC-like domain CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 214 232 1.8E-23 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 1.8E-23 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 1.8E-23 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 1.8E-23 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 Gene3D G3DSA:2.30.330.10 247 326 3.5E-8 T 23-04-2016 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 PIRSF PIRSF002888 3 329 6.3E-93 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 322 5.7E-103 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 321 1.1E-15 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CYCME_RS04515 4c1f6573c9d5b80fcba916b5829e25cc 335 Pfam PF02154 Flagellar motor switch protein FliM 40 232 9.5E-72 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 Pfam PF13247 4Fe-4S dicluster domain 112 203 3.4E-22 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 Gene3D G3DSA:3.30.70.20 188 240 2.6E-28 T 23-04-2016 CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 Gene3D G3DSA:3.30.70.20 60 120 2.6E-28 T 23-04-2016 CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 PANTHER PTHR11938 58 206 3.9E-38 T 23-04-2016 CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 284 556 2.7E-18 T 23-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 SUPERFAMILY SSF54862 58 232 1.26E-56 T 23-04-2016 CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 Gene3D G3DSA:3.30.70.20 155 187 1.5E-11 T 23-04-2016 CYCME_RS08575 0e416bcfba4b77f4caa2966315c7b4c1 629 Gene3D G3DSA:3.30.70.20 121 154 3.5E-9 T 23-04-2016 CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 PRINTS PR00069 Aldo-keto reductase signature 70 88 1.4E-9 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 PRINTS PR00069 Aldo-keto reductase signature 121 138 1.4E-9 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 Pfam PF00248 Aldo/keto reductase family 1 294 3.9E-55 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 SUPERFAMILY SSF51430 1 301 1.44E-82 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 PANTHER PTHR11732 109 301 5.4E-119 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 PANTHER PTHR11732 1 88 5.4E-119 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 PANTHER PTHR11732:SF112 109 301 5.4E-119 T 23-04-2016 CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 PANTHER PTHR11732:SF112 1 88 5.4E-119 T 23-04-2016 CYCME_RS00975 36ba835168924c6d9ae08a7cf7173cf6 302 Gene3D G3DSA:3.20.20.100 1 300 1.6E-79 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain CYCME_RS05250 3d11bfa8c8a1d430cab4b821cb102fde 152 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 2.7E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CYCME_RS05250 3d11bfa8c8a1d430cab4b821cb102fde 152 PIRSF PIRSF010312 1 152 5.4E-39 T 23-04-2016 IPR016568 Sulphur oxidation, SoxY CYCME_RS05250 3d11bfa8c8a1d430cab4b821cb102fde 152 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 150 3.9E-41 T 23-04-2016 IPR016568 Sulphur oxidation, SoxY CYCME_RS05250 3d11bfa8c8a1d430cab4b821cb102fde 152 Pfam PF13501 Sulfur oxidation protein SoxY 47 150 3.4E-30 T 23-04-2016 IPR032711 Ig-like SoxY domain CYCME_RS02585 acd53176a9938e9b54ae7d60c5782dbd 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 33.283 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 CYCME_RS02585 acd53176a9938e9b54ae7d60c5782dbd 151 PANTHER PTHR11241 1 151 3.8E-53 T 23-04-2016 CYCME_RS02585 acd53176a9938e9b54ae7d60c5782dbd 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 7.3E-49 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 CYCME_RS02585 acd53176a9938e9b54ae7d60c5782dbd 151 Pfam PF00692 dUTPase 17 149 4.2E-41 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CYCME_RS02585 acd53176a9938e9b54ae7d60c5782dbd 151 Gene3D G3DSA:2.70.40.10 5 150 5.9E-54 T 23-04-2016 IPR029054 dUTPase-like CYCME_RS02585 acd53176a9938e9b54ae7d60c5782dbd 151 SUPERFAMILY SSF51283 1 150 7.33E-54 T 23-04-2016 IPR029054 dUTPase-like CYCME_RS10765 4b22c92b09c1b5c2337c7e6314949675 356 PANTHER PTHR21716:SF19 5 345 1.4E-111 T 23-04-2016 CYCME_RS10765 4b22c92b09c1b5c2337c7e6314949675 356 Pfam PF01594 Domain of unknown function DUF20 18 344 3.1E-60 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CYCME_RS10765 4b22c92b09c1b5c2337c7e6314949675 356 PANTHER PTHR21716 5 345 1.4E-111 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CYCME_RS01720 d892d772752ab393acb774ecec9a532a 265 Gene3D G3DSA:3.30.70.270 121 253 1.4E-8 T 23-04-2016 CYCME_RS01720 d892d772752ab393acb774ecec9a532a 265 SUPERFAMILY SSF55073 124 252 1.88E-9 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS01720 d892d772752ab393acb774ecec9a532a 265 Pfam PF00990 Diguanylate cyclase, GGDEF domain 121 252 9.8E-5 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05125 58ffac766852316551158802fb06905b 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CYCME_RS05125 58ffac766852316551158802fb06905b 477 Gene3D G3DSA:3.50.50.60 5 150 4.1E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05125 58ffac766852316551158802fb06905b 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 474 9.2E-167 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.6E-40 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 7.6E-40 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 7.6E-40 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 7.6E-40 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 7.6E-40 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 351 372 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 1.4E-80 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 SUPERFAMILY SSF51905 2 346 6.14E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PANTHER PTHR22912 1 467 4.8E-231 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 464 4.9E-38 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS05125 58ffac766852316551158802fb06905b 477 Gene3D G3DSA:3.50.50.60 151 342 1.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05125 58ffac766852316551158802fb06905b 477 SUPERFAMILY SSF55424 351 474 6.7E-43 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CYCME_RS05125 58ffac766852316551158802fb06905b 477 Gene3D G3DSA:3.30.390.30 343 473 1.9E-49 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PIRSF PIRSF000350 2 474 3.3E-85 T 23-04-2016 CYCME_RS05125 58ffac766852316551158802fb06905b 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 336 3.8E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS05125 58ffac766852316551158802fb06905b 477 PANTHER PTHR22912:SF131 1 467 4.8E-231 T 23-04-2016 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 SUPERFAMILY SSF55021 4 77 7.4E-21 T 23-04-2016 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 4 159 6.7E-50 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 PANTHER PTHR30239 1 163 2.1E-54 T 23-04-2016 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 Gene3D G3DSA:3.30.70.260 3 80 2.5E-34 T 23-04-2016 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 Pfam PF10369 Small subunit of acetolactate synthase 86 158 7.1E-15 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 Pfam PF13710 ACT domain 15 74 5.7E-15 T 23-04-2016 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 Gene3D G3DSA:3.30.70.1150 85 162 2.0E-14 T 23-04-2016 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 78 4.0E-31 T 23-04-2016 CYCME_RS12095 eff496216f915aa235fac979e31f6a64 164 SUPERFAMILY SSF55021 83 161 2.29E-13 T 23-04-2016 CYCME_RS00545 d263271d2bc606a34a3c8b65dcacc7e8 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 81 4.9E-16 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CYCME_RS00545 d263271d2bc606a34a3c8b65dcacc7e8 212 Gene3D G3DSA:3.40.30.10 4 94 1.3E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS00545 d263271d2bc606a34a3c8b65dcacc7e8 212 SUPERFAMILY SSF52833 7 107 4.63E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS00545 d263271d2bc606a34a3c8b65dcacc7e8 212 Gene3D G3DSA:1.20.1050.10 95 206 1.5E-13 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS00545 d263271d2bc606a34a3c8b65dcacc7e8 212 PANTHER PTHR11260 6 206 5.0E-35 T 23-04-2016 CYCME_RS00545 d263271d2bc606a34a3c8b65dcacc7e8 212 SUPERFAMILY SSF47616 84 207 1.39E-19 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS00545 d263271d2bc606a34a3c8b65dcacc7e8 212 ProSitePatterns PS00195 Glutaredoxin active site. 10 25 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 CYCME_RS09425 2ba47e5de4a0d71ae6fde9974444110f 259 PANTHER PTHR33973 5 254 2.0E-65 T 23-04-2016 CYCME_RS09425 2ba47e5de4a0d71ae6fde9974444110f 259 Pfam PF07103 Protein of unknown function (DUF1365) 8 254 5.6E-73 T 23-04-2016 IPR010775 Protein of unknown function DUF1365 CYCME_RS06550 b1a1574c5ec412e3c59cd66e3698c921 97 PANTHER PTHR33677 10 95 2.1E-23 T 23-04-2016 CYCME_RS06550 b1a1574c5ec412e3c59cd66e3698c921 97 Pfam PF02583 Metal-sensitive transcriptional repressor 13 94 5.9E-28 T 23-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CYCME_RS08010 8b5913149b546b80be326c10dc817ac5 237 SMART SM00479 2 175 9.6E-45 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CYCME_RS08010 8b5913149b546b80be326c10dc817ac5 237 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 231 1.1E-95 T 23-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS08010 8b5913149b546b80be326c10dc817ac5 237 Pfam PF00929 Exonuclease 4 166 3.6E-37 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CYCME_RS08010 8b5913149b546b80be326c10dc817ac5 237 SUPERFAMILY SSF53098 1 176 8.35E-52 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS08010 8b5913149b546b80be326c10dc817ac5 237 PANTHER PTHR30231 1 229 2.5E-107 T 23-04-2016 CYCME_RS08010 8b5913149b546b80be326c10dc817ac5 237 Gene3D G3DSA:3.30.420.10 1 175 3.9E-62 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS08010 8b5913149b546b80be326c10dc817ac5 237 PANTHER PTHR30231:SF0 1 229 2.5E-107 T 23-04-2016 CYCME_RS08010 8b5913149b546b80be326c10dc817ac5 237 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 212 5.7E-70 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 SUPERFAMILY SSF52540 330 578 9.49E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 15 579 1.3E-233 T 23-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 SUPERFAMILY SSF90123 13 323 2.62E-71 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 SMART SM00382 367 554 2.0E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 Pfam PF00664 ABC transporter transmembrane region 32 290 3.8E-48 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 Pfam PF00005 ABC transporter 358 508 3.4E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 Gene3D G3DSA:1.20.1560.10 17 323 8.9E-69 T 23-04-2016 CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 Gene3D G3DSA:3.40.50.300 340 572 2.9E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 PANTHER PTHR24221 11 581 1.1E-224 T 23-04-2016 CYCME_RS03355 3272f4a036b2e7a2b2e88c88a54239cf 582 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS09040 35c420e8926a45879357c56c6319b403 288 SUPERFAMILY SSF109604 14 280 9.87E-61 T 23-04-2016 CYCME_RS09040 35c420e8926a45879357c56c6319b403 288 Gene3D G3DSA:1.10.3150.10 12 281 1.2E-70 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CYCME_RS09040 35c420e8926a45879357c56c6319b403 288 Pfam PF08668 HDOD domain 22 217 2.3E-56 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CYCME_RS09040 35c420e8926a45879357c56c6319b403 288 PANTHER PTHR33525:SF3 12 286 7.0E-47 T 23-04-2016 CYCME_RS09040 35c420e8926a45879357c56c6319b403 288 PANTHER PTHR33525 12 286 7.0E-47 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 PANTHER PTHR13734 94 687 8.1E-115 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 SUPERFAMILY SSF81301 35 164 2.2E-20 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 870 3.9E-274 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 SUPERFAMILY SSF55021 690 746 3.82E-6 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 SUPERFAMILY SSF55021 797 863 1.07E-10 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 SUPERFAMILY SSF81593 177 298 1.18E-9 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 Pfam PF01909 Nucleotidyltransferase domain 70 126 8.0E-5 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 Pfam PF01966 HD domain 450 579 7.8E-9 T 23-04-2016 IPR006674 HD domain CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 SUPERFAMILY SSF109604 416 578 4.71E-13 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 878 282.111 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 PIRSF PIRSF006288 3 877 1.5E-302 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 PANTHER PTHR13734:SF45 94 687 8.1E-115 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 SMART SM00471 445 592 1.8E-9 T 23-04-2016 IPR003607 HD/PDEase domain CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 Gene3D G3DSA:3.30.460.10 52 164 8.2E-11 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 Pfam PF08335 GlnD PII-uridylyltransferase 175 312 2.3E-35 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 Gene3D G3DSA:3.30.70.260 797 866 3.1E-11 T 23-04-2016 CYCME_RS07715 9db889b2130fbb44f3ef4fcbc5e3830c 878 Gene3D G3DSA:1.10.3210.10 419 608 3.4E-22 T 23-04-2016 IPR006674 HD domain CYCME_RS11595 5c8f37bfef09acd4959c88e57487da8a 105 PIRSF PIRSF005894 1 105 3.9E-49 T 23-04-2016 IPR014434 Monothiol glutaredoxin CYCME_RS11595 5c8f37bfef09acd4959c88e57487da8a 105 PANTHER PTHR10293 1 102 3.6E-60 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related CYCME_RS11595 5c8f37bfef09acd4959c88e57487da8a 105 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.5E-46 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related CYCME_RS11595 5c8f37bfef09acd4959c88e57487da8a 105 Gene3D G3DSA:3.40.30.10 7 101 4.6E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS11595 5c8f37bfef09acd4959c88e57487da8a 105 SUPERFAMILY SSF52833 2 103 1.01E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS11595 5c8f37bfef09acd4959c88e57487da8a 105 Pfam PF00462 Glutaredoxin 16 80 7.7E-21 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CYCME_RS01595 f222a45ba6a3f33ecedab2cf93cad5c8 338 SMART SM00257 31 79 1.9E-5 T 23-04-2016 IPR018392 LysM domain CYCME_RS01595 f222a45ba6a3f33ecedab2cf93cad5c8 338 PANTHER PTHR34700 17 335 6.3E-52 T 23-04-2016 CYCME_RS01595 f222a45ba6a3f33ecedab2cf93cad5c8 338 Pfam PF01476 LysM domain 32 77 1.6E-11 T 23-04-2016 IPR018392 LysM domain CYCME_RS01595 f222a45ba6a3f33ecedab2cf93cad5c8 338 PANTHER PTHR34700:SF2 17 335 6.3E-52 T 23-04-2016 CYCME_RS01595 f222a45ba6a3f33ecedab2cf93cad5c8 338 SUPERFAMILY SSF54106 31 78 4.45E-7 T 23-04-2016 IPR018392 LysM domain CYCME_RS01595 f222a45ba6a3f33ecedab2cf93cad5c8 338 Gene3D G3DSA:3.10.350.10 31 77 1.1E-7 T 23-04-2016 IPR018392 LysM domain CYCME_RS11405 c4299d47b14d09d933c1385af9ba5340 329 PANTHER PTHR30106 1 329 1.7E-61 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CYCME_RS11405 c4299d47b14d09d933c1385af9ba5340 329 Pfam PF03601 Conserved hypothetical protein 698 9 309 7.2E-77 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 PANTHER PTHR30258 1 568 1.1E-242 T 23-04-2016 CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 Gene3D G3DSA:3.30.450.90 171 293 2.2E-51 T 23-04-2016 CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 SUPERFAMILY SSF52540 175 566 2.0E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 152 1.4E-18 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 Pfam PF00437 Type II/IV secretion system protein 193 460 3.3E-87 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 Gene3D G3DSA:3.40.50.300 301 568 3.6E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 SMART SM00382 321 444 0.0058 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 388 402 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 PANTHER PTHR30258:SF1 1 568 1.1E-242 T 23-04-2016 CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 SUPERFAMILY SSF160246 9 144 1.96E-33 T 23-04-2016 CYCME_RS11030 1ad35cb27b2eab4099ea7bd1c5ff490c 569 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 12 569 4.4E-257 T 23-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 SUPERFAMILY SSF90123 156 471 4.05E-52 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 PANTHER PTHR24221:SF248 140 709 3.9E-252 T 23-04-2016 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 PANTHER PTHR24221:SF248 41 82 3.9E-252 T 23-04-2016 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 Pfam PF00664 ABC transporter transmembrane region 174 431 4.2E-24 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 21 715 2.6E-300 T 23-04-2016 IPR017750 ATPase, type I secretion system CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 PANTHER PTHR24221 140 709 3.9E-252 T 23-04-2016 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 PANTHER PTHR24221 41 82 3.9E-252 T 23-04-2016 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 SMART SM00382 511 697 5.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 Pfam PF00005 ABC transporter 502 651 1.1E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 Pfam PF03412 Peptidase C39 family 18 138 4.8E-5 T 23-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 SUPERFAMILY SSF52540 474 709 2.11E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 Gene3D G3DSA:3.90.70.10 19 141 3.2E-38 T 23-04-2016 CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 Gene3D G3DSA:3.40.50.300 485 710 1.1E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01965 d8422d6a24c4198b8872edb163b5578f 720 Gene3D G3DSA:1.20.1560.10 158 468 1.1E-51 T 23-04-2016 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 498 5.8E-85 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 PANTHER PTHR22594:SF4 3 499 1.7E-265 T 23-04-2016 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 383 399 5.4E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 241 254 5.4E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 196 206 5.4E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 212 228 5.4E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 259 276 5.4E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 SUPERFAMILY SSF55681 159 498 2.39E-122 T 23-04-2016 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 SUPERFAMILY SSF50249 11 152 2.57E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 499 7.5E-209 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 PANTHER PTHR22594 3 499 1.7E-265 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 Gene3D G3DSA:3.30.930.10 154 497 5.8E-122 T 23-04-2016 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 Pfam PF01336 OB-fold nucleic acid binding domain 66 143 5.3E-15 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 501 44.485 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS07475 85ce5080c0c97b57f6357541dba3e3e7 502 Gene3D G3DSA:2.40.50.140 14 151 2.9E-48 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 Pfam PF01264 Chorismate synthase 10 345 1.6E-136 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 Gene3D G3DSA:3.60.150.10 9 353 5.0E-153 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.513 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 SUPERFAMILY SSF103263 4 353 3.01E-144 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 PANTHER PTHR21085 2 361 1.1E-204 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 PIRSF PIRSF001456 3 360 6.5E-136 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS04605 9d10eb6f741a76b07f8cdd3529f884a1 368 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 8.2E-137 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CYCME_RS06100 8a304537a1fc321d00df7e63ee49da41 150 Gene3D G3DSA:3.10.129.10 4 148 2.7E-41 T 23-04-2016 IPR029069 HotDog domain CYCME_RS06100 8a304537a1fc321d00df7e63ee49da41 150 SUPERFAMILY SSF54637 11 144 3.83E-28 T 23-04-2016 IPR029069 HotDog domain CYCME_RS06100 8a304537a1fc321d00df7e63ee49da41 150 Pfam PF03061 Thioesterase superfamily 53 132 6.4E-5 T 23-04-2016 IPR006683 Thioesterase domain CYCME_RS05280 15c00db097891280e542ea60cd596b9b 184 PANTHER PTHR36917:SF1 1 177 1.1E-59 T 23-04-2016 CYCME_RS05280 15c00db097891280e542ea60cd596b9b 184 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 17.981 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 CYCME_RS05280 15c00db097891280e542ea60cd596b9b 184 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 1.7E-54 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 CYCME_RS05280 15c00db097891280e542ea60cd596b9b 184 PANTHER PTHR36917 1 177 1.1E-59 T 23-04-2016 CYCME_RS05280 15c00db097891280e542ea60cd596b9b 184 Pfam PF04279 Intracellular septation protein A 1 175 2.7E-62 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 CYCME_RS04085 72195d623688e3ddb9f16d725b12a3f4 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-13 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CYCME_RS04085 72195d623688e3ddb9f16d725b12a3f4 215 SUPERFAMILY SSF47616 82 203 9.24E-23 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS04085 72195d623688e3ddb9f16d725b12a3f4 215 PANTHER PTHR11260 9 207 4.6E-88 T 23-04-2016 CYCME_RS04085 72195d623688e3ddb9f16d725b12a3f4 215 PANTHER PTHR11260:SF44 9 207 4.6E-88 T 23-04-2016 CYCME_RS04085 72195d623688e3ddb9f16d725b12a3f4 215 SUPERFAMILY SSF52833 11 111 2.97E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS04085 72195d623688e3ddb9f16d725b12a3f4 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 193 3.1E-7 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CYCME_RS04085 72195d623688e3ddb9f16d725b12a3f4 215 Gene3D G3DSA:3.40.30.10 9 101 9.8E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS04085 72195d623688e3ddb9f16d725b12a3f4 215 Gene3D G3DSA:1.20.1050.10 102 203 1.4E-14 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 PANTHER PTHR32063 5 1027 4.1E-244 T 23-04-2016 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 Gene3D G3DSA:3.30.2090.10 728 798 5.1E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 SUPERFAMILY SSF82693 45 134 1.1E-13 T 23-04-2016 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 Gene3D G3DSA:3.30.70.1430 45 142 1.2E-15 T 23-04-2016 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 PANTHER PTHR32063:SF33 5 1027 4.1E-244 T 23-04-2016 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 Gene3D G3DSA:1.10.3850.10 274 493 2.3E-37 T 23-04-2016 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 Gene3D G3DSA:1.10.3850.10 809 1024 9.5E-48 T 23-04-2016 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 SUPERFAMILY SSF82714 182 264 5.89E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.2E-23 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 1.2E-23 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 1.2E-23 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.2E-23 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 1.2E-23 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 1.2E-23 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 Pfam PF00873 AcrB/AcrD/AcrF family 8 1022 5.6E-136 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 SUPERFAMILY SSF82866 298 493 6.02E-31 T 23-04-2016 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 SUPERFAMILY SSF82866 804 1025 1.7E-41 T 23-04-2016 CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 Gene3D G3DSA:3.30.2090.10 181 264 1.5E-10 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS04785 9559f4437a1bb8c89322be83f139f759 1053 SUPERFAMILY SSF82714 728 800 2.22E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYCME_RS04920 e6d1958a3df6e11e3c50fc3d1b9b4f3c 294 PANTHER PTHR20275 5 290 1.5E-84 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CYCME_RS04920 e6d1958a3df6e11e3c50fc3d1b9b4f3c 294 SUPERFAMILY SSF111331 7 289 1.96E-83 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain CYCME_RS04920 e6d1958a3df6e11e3c50fc3d1b9b4f3c 294 Pfam PF01513 ATP-NAD kinase 7 270 1.1E-59 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CYCME_RS04920 e6d1958a3df6e11e3c50fc3d1b9b4f3c 294 Hamap MF_00361 NAD kinase [nadK]. 6 288 32.205 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CYCME_RS04920 e6d1958a3df6e11e3c50fc3d1b9b4f3c 294 Gene3D G3DSA:2.60.200.30 148 262 5.3E-38 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CYCME_RS04920 e6d1958a3df6e11e3c50fc3d1b9b4f3c 294 Gene3D G3DSA:3.40.50.10330 2 147 1.9E-36 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 SUPERFAMILY SSF159127 1 76 1.06E-19 T 23-04-2016 CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 23-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 PANTHER PTHR35177 1 78 3.5E-20 T 23-04-2016 CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 Pfam PF01455 HupF/HypC family 1 68 4.3E-23 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 PANTHER PTHR35177:SF2 1 78 3.5E-20 T 23-04-2016 CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 22 38 1.3E-12 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 43 59 1.3E-12 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.3E-12 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 61 73 1.3E-12 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CYCME_RS08730 8790a5acccbe46adcffc2a84c73b353f 78 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 76 3.8E-20 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CYCME_RS06490 ab9ad48b54d85b1a8f357b96ecb3695b 103 PRINTS PR00340 P-II protein signature 24 42 8.4E-5 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS06490 ab9ad48b54d85b1a8f357b96ecb3695b 103 PRINTS PR00340 P-II protein signature 53 76 8.4E-5 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS06490 ab9ad48b54d85b1a8f357b96ecb3695b 103 SMART SM00938 4 102 0.0081 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS06490 ab9ad48b54d85b1a8f357b96ecb3695b 103 Gene3D G3DSA:3.30.70.120 2 102 6.2E-14 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYCME_RS06490 ab9ad48b54d85b1a8f357b96ecb3695b 103 SUPERFAMILY SSF54913 1 102 1.53E-13 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CYCME_RS06490 ab9ad48b54d85b1a8f357b96ecb3695b 103 Pfam PF11582 Protein of unknown function (DUF3240) 3 102 2.1E-16 T 23-04-2016 IPR021634 Protein of unknown function DUF3240 CYCME_RS03445 7b4c25df73cd9ed88f2f562e1c31867f 288 ProSitePatterns PS00770 Aminotransferases class-IV signature. 183 212 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS03445 7b4c25df73cd9ed88f2f562e1c31867f 288 Gene3D G3DSA:3.30.470.10 8 121 8.5E-33 T 23-04-2016 CYCME_RS03445 7b4c25df73cd9ed88f2f562e1c31867f 288 PANTHER PTHR11825 8 286 7.4E-89 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS03445 7b4c25df73cd9ed88f2f562e1c31867f 288 SUPERFAMILY SSF56752 8 281 4.19E-75 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS03445 7b4c25df73cd9ed88f2f562e1c31867f 288 Pfam PF01063 Amino-transferase class IV 34 256 2.5E-48 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CYCME_RS03445 7b4c25df73cd9ed88f2f562e1c31867f 288 PANTHER PTHR11825:SF38 8 286 7.4E-89 T 23-04-2016 CYCME_RS03445 7b4c25df73cd9ed88f2f562e1c31867f 288 Gene3D G3DSA:3.20.10.10 131 281 4.5E-46 T 23-04-2016 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 PANTHER PTHR10909:SF296 4 475 3.1E-191 T 23-04-2016 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 450 5.7E-24 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 Gene3D G3DSA:1.10.540.10 41 158 4.1E-14 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 3.0E-9 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 PANTHER PTHR10909 4 475 3.1E-191 T 23-04-2016 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 79 153 3.6E-8 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 582 1.1E-30 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 Gene3D G3DSA:2.40.110.10 160 267 2.1E-28 T 23-04-2016 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 Gene3D G3DSA:1.20.140.10 268 457 1.2E-54 T 23-04-2016 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 7.6E-19 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 SUPERFAMILY SSF47203 286 471 1.53E-46 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS11690 d47a665966d0b2d4fd9d62641778a5bc 589 SUPERFAMILY SSF56645 41 279 1.44E-51 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS01790 d11ae4f9a5f1c7f79c0ad6d50a8197b6 118 PANTHER PTHR35303 1 116 1.6E-43 T 23-04-2016 CYCME_RS01790 d11ae4f9a5f1c7f79c0ad6d50a8197b6 118 PANTHER PTHR35303:SF1 1 116 1.6E-43 T 23-04-2016 CYCME_RS01790 d11ae4f9a5f1c7f79c0ad6d50a8197b6 118 Pfam PF06155 Protein of unknown function (DUF971) 9 90 6.8E-28 T 23-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 CYCME_RS07695 3f36ff9d4817f88d9f47048e479ec473 237 Gene3D G3DSA:3.40.1160.10 3 236 5.2E-81 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS07695 3f36ff9d4817f88d9f47048e479ec473 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 6.4E-95 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CYCME_RS07695 3f36ff9d4817f88d9f47048e479ec473 237 PANTHER PTHR21499 6 237 2.7E-101 T 23-04-2016 CYCME_RS07695 3f36ff9d4817f88d9f47048e479ec473 237 PANTHER PTHR21499:SF23 6 237 2.7E-101 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CYCME_RS07695 3f36ff9d4817f88d9f47048e479ec473 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 43.123 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CYCME_RS07695 3f36ff9d4817f88d9f47048e479ec473 237 SUPERFAMILY SSF53633 5 236 1.7E-68 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS07695 3f36ff9d4817f88d9f47048e479ec473 237 PIRSF PIRSF005650 1 237 1.3E-84 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CYCME_RS07695 3f36ff9d4817f88d9f47048e479ec473 237 Pfam PF00696 Amino acid kinase family 7 216 1.3E-26 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CYCME_RS10305 34c5a0adeed7e47d46ea9d5da0782b7c 163 Pfam PF00866 Ring hydroxylating beta subunit 16 155 3.8E-40 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS10305 34c5a0adeed7e47d46ea9d5da0782b7c 163 Gene3D G3DSA:3.10.450.50 1 155 6.1E-46 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS10305 34c5a0adeed7e47d46ea9d5da0782b7c 163 PANTHER PTHR41534 1 163 2.0E-45 T 23-04-2016 CYCME_RS10305 34c5a0adeed7e47d46ea9d5da0782b7c 163 SUPERFAMILY SSF54427 1 162 9.0E-49 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS10305 34c5a0adeed7e47d46ea9d5da0782b7c 163 PANTHER PTHR41534:SF1 1 163 2.0E-45 T 23-04-2016 CYCME_RS07950 9ac9e91ff97b407b6cf194ea3306bed5 161 Gene3D G3DSA:3.10.450.50 4 155 1.4E-31 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS07950 9ac9e91ff97b407b6cf194ea3306bed5 161 Pfam PF13577 SnoaL-like domain 8 144 5.5E-15 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain CYCME_RS07950 9ac9e91ff97b407b6cf194ea3306bed5 161 SUPERFAMILY SSF54427 7 161 3.88E-48 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 4 451 2.7E-190 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 430 2.2E-8 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 SUPERFAMILY SSF52540 70 292 4.63E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 Gene3D G3DSA:3.40.50.300 61 277 2.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 PANTHER PTHR32472 4 451 1.2E-196 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 SUPERFAMILY SSF54211 303 453 9.86E-39 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 SUPERFAMILY SSF54211 255 269 9.86E-39 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 PRINTS PR01874 DNA repair protein radA signature 11 35 1.7E-93 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 PRINTS PR01874 DNA repair protein radA signature 124 141 1.7E-93 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 PRINTS PR01874 DNA repair protein radA signature 174 198 1.7E-93 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 PRINTS PR01874 DNA repair protein radA signature 213 241 1.7E-93 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 PRINTS PR01874 DNA repair protein radA signature 322 345 1.7E-93 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 PRINTS PR01874 DNA repair protein radA signature 83 111 1.7E-93 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 PRINTS PR01874 DNA repair protein radA signature 248 274 1.7E-93 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 Pfam PF13481 AAA domain 78 222 4.5E-14 T 23-04-2016 CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 SMART SM00382 91 244 6.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS09140 5caaff07eff02ecad2e18ca562b1ea24 454 Gene3D G3DSA:3.30.230.10 284 453 2.8E-32 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS10215 db94f56aeb96ec37b83e0db089ebed42 263 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 260 8.8E-7 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS10215 db94f56aeb96ec37b83e0db089ebed42 263 PANTHER PTHR30143 1 263 7.6E-66 T 23-04-2016 CYCME_RS10215 db94f56aeb96ec37b83e0db089ebed42 263 Gene3D G3DSA:3.90.850.10 3 262 8.2E-77 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS10215 db94f56aeb96ec37b83e0db089ebed42 263 SUPERFAMILY SSF56529 3 262 3.05E-73 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS10215 db94f56aeb96ec37b83e0db089ebed42 263 TIGRFAM TIGR03218 catechol_dmpH: 4-oxalocrotonate decarboxylase 1 261 2.2E-144 T 23-04-2016 IPR017630 4-oxalocrotonate decarboxylase KEGG: 00362+4.1.1.77|KEGG: 00621+4.1.1.77|KEGG: 00622+4.1.1.77|MetaCyc: PWY-5419|MetaCyc: PWY-5647|MetaCyc: PWY-5654|MetaCyc: PWY-6210|MetaCyc: PWY-6214|MetaCyc: PWY-6336|MetaCyc: PWY-7006|MetaCyc: PWY-7480 CYCME_RS10045 79da93394265e78887e526b3dd1e3e40 170 PANTHER PTHR38773 1 167 4.5E-33 T 23-04-2016 CYCME_RS10045 79da93394265e78887e526b3dd1e3e40 170 SMART SM00731 15 170 1.0E-14 T 23-04-2016 IPR006640 SprT-like CYCME_RS10045 79da93394265e78887e526b3dd1e3e40 170 Pfam PF10263 SprT-like family 32 168 3.8E-19 T 23-04-2016 IPR006640 SprT-like CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 Gene3D G3DSA:3.40.50.620 232 263 3.8E-78 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 Gene3D G3DSA:3.40.50.620 1 161 3.8E-78 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 3 12 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 Pfam PF00579 tRNA synthetases class I (W and Y) 234 339 3.8E-11 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 Pfam PF00579 tRNA synthetases class I (W and Y) 1 161 4.8E-45 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 SUPERFAMILY SSF52374 1 163 2.13E-82 T 23-04-2016 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 SUPERFAMILY SSF52374 234 388 2.13E-82 T 23-04-2016 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 58 77 1.2E-18 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 7 23 1.2E-18 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 136 157 1.2E-18 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 PANTHER PTHR10055 233 391 6.1E-149 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 PANTHER PTHR10055 1 162 6.1E-149 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 Gene3D G3DSA:1.10.240.10 264 383 6.9E-35 T 23-04-2016 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 PANTHER PTHR10055:SF6 233 391 6.1E-149 T 23-04-2016 CYCME_RS08995 1dc458539e3b18ae62ddbac37fadf7cc 391 PANTHER PTHR10055:SF6 1 162 6.1E-149 T 23-04-2016 CYCME_RS09985 4be1fe998c103ac0f4b3e04283a67904 169 SUPERFAMILY SSF101327 3 162 1.29E-13 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 CYCME_RS09985 4be1fe998c103ac0f4b3e04283a67904 169 Pfam PF03695 Uncharacterised protein family (UPF0149) 4 164 1.6E-24 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 CYCME_RS09985 4be1fe998c103ac0f4b3e04283a67904 169 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 163 1.2E-21 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 CYCME_RS01450 705ecf99a1e481eb9169fb3aac2c2eb3 609 Pfam PF00474 Sodium:solute symporter family 33 297 3.7E-37 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CYCME_RS01450 705ecf99a1e481eb9169fb3aac2c2eb3 609 Pfam PF00474 Sodium:solute symporter family 413 528 6.6E-17 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CYCME_RS01450 705ecf99a1e481eb9169fb3aac2c2eb3 609 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 510 530 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CYCME_RS01450 705ecf99a1e481eb9169fb3aac2c2eb3 609 PANTHER PTHR11819 381 609 3.0E-202 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CYCME_RS01450 705ecf99a1e481eb9169fb3aac2c2eb3 609 PANTHER PTHR11819 4 309 3.0E-202 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CYCME_RS01450 705ecf99a1e481eb9169fb3aac2c2eb3 609 PANTHER PTHR11819:SF159 381 609 3.0E-202 T 23-04-2016 CYCME_RS01450 705ecf99a1e481eb9169fb3aac2c2eb3 609 PANTHER PTHR11819:SF159 4 309 3.0E-202 T 23-04-2016 CYCME_RS01450 705ecf99a1e481eb9169fb3aac2c2eb3 609 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 600 8.5E-254 T 23-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.2E-64 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 PANTHER PTHR32125:SF1 1 228 6.3E-111 T 23-04-2016 CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 253 107.979 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 Gene3D G3DSA:3.40.1280.10 1 160 5.6E-65 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 SUPERFAMILY SSF75217 1 246 4.58E-99 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 PANTHER PTHR32125 1 228 6.3E-111 T 23-04-2016 CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 2.5E-95 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 Gene3D G3DSA:1.10.1270.20 161 249 2.1E-35 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CYCME_RS08375 01dcaf6271de3b8cde90356e160ab599 253 PIRSF PIRSF000386 1 252 1.4E-99 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CYCME_RS12130 3a37a19d933bd87654691549286e939e 100 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 24 95 1.4E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12130 3a37a19d933bd87654691549286e939e 100 PANTHER PTHR33751 1 100 2.6E-26 T 23-04-2016 CYCME_RS12130 3a37a19d933bd87654691549286e939e 100 Gene3D G3DSA:1.10.760.10 10 99 5.3E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12130 3a37a19d933bd87654691549286e939e 100 SUPERFAMILY SSF46626 21 98 9.6E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS12130 3a37a19d933bd87654691549286e939e 100 PANTHER PTHR33751:SF3 1 100 2.6E-26 T 23-04-2016 CYCME_RS07920 09ae376c09466247eba388434d1d7f6d 405 SUPERFAMILY SSF50022 30 147 7.07E-33 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07920 09ae376c09466247eba388434d1d7f6d 405 Pfam PF11723 Homotrimeric ring hydroxylase 145 389 6.1E-74 T 23-04-2016 IPR021028 Homotrimeric ring hydroxylase, catalytic domain KEGG: 00621+1.14.12.22|MetaCyc: PWY-6550 CYCME_RS07920 09ae376c09466247eba388434d1d7f6d 405 Gene3D G3DSA:2.102.10.10 34 150 5.4E-26 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07920 09ae376c09466247eba388434d1d7f6d 405 PANTHER PTHR21266 33 312 4.0E-32 T 23-04-2016 CYCME_RS07920 09ae376c09466247eba388434d1d7f6d 405 Pfam PF00355 Rieske [2Fe-2S] domain 36 115 2.6E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07920 09ae376c09466247eba388434d1d7f6d 405 SUPERFAMILY SSF55961 159 393 7.85E-45 T 23-04-2016 CYCME_RS11180 0590e29f447e1065b25d5dac816b9373 339 PANTHER PTHR30365:SF4 3 332 3.2E-137 T 23-04-2016 CYCME_RS11180 0590e29f447e1065b25d5dac816b9373 339 PIRSF PIRSF000267 7 338 5.3E-88 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CYCME_RS11180 0590e29f447e1065b25d5dac816b9373 339 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 10 215 8.2E-41 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CYCME_RS11180 0590e29f447e1065b25d5dac816b9373 339 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 329 1.0E-94 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CYCME_RS11180 0590e29f447e1065b25d5dac816b9373 339 PANTHER PTHR30365 3 332 3.2E-137 T 23-04-2016 CYCME_RS04460 88b00c72016ba5fd0f5ce330f1de7b79 77 PANTHER PTHR34772 1 76 3.5E-35 T 23-04-2016 CYCME_RS04460 88b00c72016ba5fd0f5ce330f1de7b79 77 PANTHER PTHR34772:SF1 1 76 3.5E-35 T 23-04-2016 CYCME_RS04460 88b00c72016ba5fd0f5ce330f1de7b79 77 SUPERFAMILY SSF50182 6 69 1.06E-23 T 23-04-2016 IPR010920 LSM domain CYCME_RS04460 88b00c72016ba5fd0f5ce330f1de7b79 77 Gene3D G3DSA:2.30.30.100 1 73 1.3E-35 T 23-04-2016 CYCME_RS04460 88b00c72016ba5fd0f5ce330f1de7b79 77 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 5.1E-30 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CYCME_RS04460 88b00c72016ba5fd0f5ce330f1de7b79 77 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 28.006 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CYCME_RS06770 10522d1be05f99e34a8c465d866b22d7 140 SUPERFAMILY SSF52172 7 133 5.41E-24 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS06770 10522d1be05f99e34a8c465d866b22d7 140 SMART SM00448 8 126 1.2E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS06770 10522d1be05f99e34a8c465d866b22d7 140 Gene3D G3DSA:3.40.50.2300 4 129 2.1E-27 T 23-04-2016 CYCME_RS06770 10522d1be05f99e34a8c465d866b22d7 140 Pfam PF00072 Response regulator receiver domain 11 120 5.5E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS06770 10522d1be05f99e34a8c465d866b22d7 140 PANTHER PTHR26402 8 129 1.1E-22 T 23-04-2016 CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 507 2.0E-18 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 PANTHER PTHR24096:SF240 8 515 1.5E-120 T 23-04-2016 CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 Gene3D G3DSA:2.30.38.10 340 418 4.8E-17 T 23-04-2016 CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 Pfam PF00501 AMP-binding enzyme 13 424 2.5E-82 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 SUPERFAMILY SSF56801 5 517 8.9E-128 T 23-04-2016 CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 Gene3D G3DSA:3.40.50.980 178 328 5.8E-37 T 23-04-2016 CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 PANTHER PTHR24096 8 515 1.5E-120 T 23-04-2016 CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 Gene3D G3DSA:3.30.300.30 419 516 5.4E-29 T 23-04-2016 CYCME_RS11395 0f739e1e8aca803bec0eead2c2419253 519 Gene3D G3DSA:3.40.50.980 7 177 1.7E-30 T 23-04-2016 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 Gene3D G3DSA:2.102.10.10 29 124 1.9E-21 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 SUPERFAMILY SSF55961 165 449 1.41E-54 T 23-04-2016 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 SUPERFAMILY SSF50022 14 164 2.1E-43 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 1.3E-44 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 1.3E-44 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 1.3E-44 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 190 212 1.3E-44 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 1.3E-44 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 1.3E-44 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 PANTHER PTHR21266:SF30 11 388 1.1E-101 T 23-04-2016 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 Pfam PF00355 Rieske [2Fe-2S] domain 46 124 6.2E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 195 445 1.4E-15 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 PANTHER PTHR21266 11 388 1.1E-101 T 23-04-2016 CYCME_RS10310 919c8a6998954dd8bc28f85bdb6f1b18 452 Gene3D G3DSA:3.90.380.10 140 450 1.3E-75 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS05295 43296fd1a9abb89d262d7dccdda3733c 101 Gene3D G3DSA:1.10.3340.10 1 84 1.1E-40 T 23-04-2016 IPR023163 SMc04008-like domain CYCME_RS05295 43296fd1a9abb89d262d7dccdda3733c 101 SUPERFAMILY SSF158757 1 77 4.84E-35 T 23-04-2016 IPR023163 SMc04008-like domain CYCME_RS05295 43296fd1a9abb89d262d7dccdda3733c 101 Pfam PF06844 Protein of unknown function (DUF1244) 27 93 6.7E-36 T 23-04-2016 IPR023163 SMc04008-like domain CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 Pfam PF00501 AMP-binding enzyme 13 412 2.1E-111 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 Gene3D G3DSA:3.40.50.980 173 330 9.2E-46 T 23-04-2016 CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 Gene3D G3DSA:2.30.38.10 331 402 3.4E-27 T 23-04-2016 CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 422 496 8.4E-22 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 SUPERFAMILY SSF56801 6 505 6.8E-154 T 23-04-2016 CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 Gene3D G3DSA:3.30.300.30 407 505 3.0E-30 T 23-04-2016 CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 PANTHER PTHR24096 5 506 3.1E-164 T 23-04-2016 CYCME_RS04095 bdc79a06dae5ac22caa35ce9d22d9d48 513 Gene3D G3DSA:3.40.50.980 6 172 1.1E-40 T 23-04-2016 CYCME_RS02435 a34af139f55c65191442ec68f696552e 280 Pfam PF13509 S1 domain 70 128 4.1E-7 T 23-04-2016 CYCME_RS02435 a34af139f55c65191442ec68f696552e 280 Pfam PF13509 S1 domain 4 64 2.0E-22 T 23-04-2016 CYCME_RS02435 a34af139f55c65191442ec68f696552e 280 PANTHER PTHR37296 1 279 3.7E-112 T 23-04-2016 CYCME_RS02435 a34af139f55c65191442ec68f696552e 280 SMART SM00316 145 207 4.9 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS02435 a34af139f55c65191442ec68f696552e 280 SMART SM00316 69 131 6.3 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS02435 a34af139f55c65191442ec68f696552e 280 SMART SM00316 3 64 5.7 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS02435 a34af139f55c65191442ec68f696552e 280 PIRSF PIRSF012524 1 277 3.0E-83 T 23-04-2016 IPR014464 Conserved virulence factor B CYCME_RS00115 534545935a097486f0ebd713aeafdcbf 346 PANTHER PTHR11933 4 248 1.0E-100 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CYCME_RS00115 534545935a097486f0ebd713aeafdcbf 346 Gene3D G3DSA:3.40.50.620 2 206 1.6E-27 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS00115 534545935a097486f0ebd713aeafdcbf 346 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 3 160 2.9E-14 T 23-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 CYCME_RS00115 534545935a097486f0ebd713aeafdcbf 346 SUPERFAMILY SSF52402 3 248 6.17E-34 T 23-04-2016 CYCME_RS00115 534545935a097486f0ebd713aeafdcbf 346 PANTHER PTHR11933:SF6 4 248 1.0E-100 T 23-04-2016 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 423 30.991 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 Gene3D G3DSA:3.20.20.140 70 386 4.8E-81 T 23-04-2016 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 423 4.1E-91 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 Pfam PF01979 Amidohydrolase family 53 420 3.2E-8 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 Gene3D G3DSA:2.30.40.10 3 69 8.0E-18 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 SUPERFAMILY SSF51338 1 55 9.87E-30 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 SUPERFAMILY SSF51338 366 422 9.87E-30 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 PANTHER PTHR11647 1 423 3.3E-133 T 23-04-2016 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 PANTHER PTHR11647:SF70 1 423 3.3E-133 T 23-04-2016 CYCME_RS01365 4d90aa3466280135e299c8bd5a6d10e8 423 SUPERFAMILY SSF51556 56 365 1.32E-78 T 23-04-2016 IPR032466 Metal-dependent hydrolase CYCME_RS07280 8317165b9e992ef2a138f021da9040ea 383 PANTHER PTHR30151:SF7 171 381 1.6E-89 T 23-04-2016 CYCME_RS07280 8317165b9e992ef2a138f021da9040ea 383 PANTHER PTHR30151:SF7 50 131 1.6E-89 T 23-04-2016 CYCME_RS07280 8317165b9e992ef2a138f021da9040ea 383 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 193 376 5.1E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS07280 8317165b9e992ef2a138f021da9040ea 383 PANTHER PTHR30151 171 381 1.6E-89 T 23-04-2016 CYCME_RS07280 8317165b9e992ef2a138f021da9040ea 383 PANTHER PTHR30151 50 131 1.6E-89 T 23-04-2016 CYCME_RS07280 8317165b9e992ef2a138f021da9040ea 383 Gene3D G3DSA:1.10.3720.10 172 377 4.2E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS07280 8317165b9e992ef2a138f021da9040ea 383 SUPERFAMILY SSF161098 172 369 2.09E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS06740 9ae229e6887d3935bc6f08bf28dc37f7 333 PANTHER PTHR30472 9 332 3.5E-98 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CYCME_RS06740 9ae229e6887d3935bc6f08bf28dc37f7 333 SUPERFAMILY SSF81345 8 326 1.09E-77 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CYCME_RS06740 9ae229e6887d3935bc6f08bf28dc37f7 333 Pfam PF01032 FecCD transport family 17 326 5.4E-88 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CYCME_RS06740 9ae229e6887d3935bc6f08bf28dc37f7 333 PANTHER PTHR30472:SF3 9 332 3.5E-98 T 23-04-2016 CYCME_RS06740 9ae229e6887d3935bc6f08bf28dc37f7 333 Gene3D G3DSA:1.10.3470.10 3 330 1.5E-99 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CYCME_RS00485 7c2df29b1352cfb4ee4e433ab1a29f8b 163 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 5.4E-27 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS00485 7c2df29b1352cfb4ee4e433ab1a29f8b 163 SUPERFAMILY SSF55083 1 154 2.35E-43 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS00485 7c2df29b1352cfb4ee4e433ab1a29f8b 163 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 2.9E-28 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS00485 7c2df29b1352cfb4ee4e433ab1a29f8b 163 Gene3D G3DSA:3.30.70.560 3 153 2.5E-42 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS00485 7c2df29b1352cfb4ee4e433ab1a29f8b 163 PANTHER PTHR20941 1 154 3.4E-49 T 23-04-2016 CYCME_RS03050 67594c6ebf36056c389857677e3450ee 129 SUPERFAMILY SSF55298 3 126 3.14E-43 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CYCME_RS03050 67594c6ebf36056c389857677e3450ee 129 PANTHER PTHR11803:SF13 2 126 1.4E-48 T 23-04-2016 CYCME_RS03050 67594c6ebf36056c389857677e3450ee 129 Gene3D G3DSA:3.30.1330.40 3 123 4.9E-45 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CYCME_RS03050 67594c6ebf36056c389857677e3450ee 129 PANTHER PTHR11803 2 126 1.4E-48 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CYCME_RS03050 67594c6ebf36056c389857677e3450ee 129 Pfam PF01042 Endoribonuclease L-PSP 10 125 4.7E-38 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CYCME_RS03050 67594c6ebf36056c389857677e3450ee 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 23-04-2016 IPR019897 RidA, conserved site CYCME_RS03050 67594c6ebf36056c389857677e3450ee 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 125 3.3E-48 T 23-04-2016 IPR006056 RidA family CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 PANTHER PTHR30173 1 186 3.3E-50 T 23-04-2016 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 SUPERFAMILY SSF88946 1 102 1.88E-29 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 Pfam PF04542 Sigma-70 region 2 25 91 1.0E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 189 3.4E-90 T 23-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 Pfam PF08281 Sigma-70, region 4 130 180 8.8E-17 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 PANTHER PTHR30173:SF1 1 186 3.3E-50 T 23-04-2016 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 Gene3D G3DSA:1.10.10.10 122 187 4.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 Gene3D G3DSA:1.10.1740.10 1 106 2.9E-34 T 23-04-2016 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 SUPERFAMILY SSF88659 122 185 1.38E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS07415 04f73c59b7988d2020151b130a112ec4 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 183 6.2E-33 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS06920 308e0f37acf106b6f80854a9483a5912 282 PANTHER PTHR10605:SF40 4 179 1.2E-18 T 23-04-2016 CYCME_RS06920 308e0f37acf106b6f80854a9483a5912 282 Gene3D G3DSA:3.40.50.300 2 272 1.4E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06920 308e0f37acf106b6f80854a9483a5912 282 PANTHER PTHR10605 4 179 1.2E-18 T 23-04-2016 CYCME_RS06920 308e0f37acf106b6f80854a9483a5912 282 Pfam PF00685 Sulfotransferase domain 3 262 9.2E-14 T 23-04-2016 IPR000863 Sulfotransferase domain GO:0008146 CYCME_RS06920 308e0f37acf106b6f80854a9483a5912 282 SUPERFAMILY SSF52540 1 274 2.9E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04470 1391adaa7643e56ec41919589c61b61d 401 TIGRFAM TIGR01933 hflK: HflK protein 82 359 8.3E-100 T 23-04-2016 IPR010201 HflK GO:0016021 CYCME_RS04470 1391adaa7643e56ec41919589c61b61d 401 PANTHER PTHR10264 2 389 2.2E-130 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CYCME_RS04470 1391adaa7643e56ec41919589c61b61d 401 Pfam PF01145 SPFH domain / Band 7 family 83 272 6.7E-28 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS04470 1391adaa7643e56ec41919589c61b61d 401 PANTHER PTHR10264:SF51 2 389 2.2E-130 T 23-04-2016 IPR010201 HflK GO:0016021 CYCME_RS04470 1391adaa7643e56ec41919589c61b61d 401 Pfam PF12221 Bacterial membrane protein N terminal 1 47 8.7E-15 T 23-04-2016 IPR020980 Menbrane protein HflK, N-terminal CYCME_RS04470 1391adaa7643e56ec41919589c61b61d 401 SUPERFAMILY SSF117892 151 262 7.98E-21 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS04470 1391adaa7643e56ec41919589c61b61d 401 SMART SM00244 80 257 4.0E-22 T 23-04-2016 IPR001107 Band 7 domain CYCME_RS08135 d7452a329bd5a676055e02f6f95bdebe 182 Gene3D G3DSA:3.10.450.50 5 182 6.3E-60 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS08135 d7452a329bd5a676055e02f6f95bdebe 182 SUPERFAMILY SSF54427 10 182 9.21E-45 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS08135 d7452a329bd5a676055e02f6f95bdebe 182 Pfam PF00866 Ring hydroxylating beta subunit 31 173 1.3E-42 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS08135 d7452a329bd5a676055e02f6f95bdebe 182 PANTHER PTHR41534 14 181 2.5E-24 T 23-04-2016 CYCME_RS05060 8f07b7fcb70f98c12e5993ab3e750ade 139 Gene3D G3DSA:1.20.1260.10 1 137 2.3E-53 T 23-04-2016 IPR012347 Ferritin-related CYCME_RS05060 8f07b7fcb70f98c12e5993ab3e750ade 139 PANTHER PTHR33746 1 138 3.1E-55 T 23-04-2016 CYCME_RS05060 8f07b7fcb70f98c12e5993ab3e750ade 139 Pfam PF02915 Rubrerythrin 11 133 4.0E-28 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CYCME_RS05060 8f07b7fcb70f98c12e5993ab3e750ade 139 PANTHER PTHR33746:SF3 1 138 3.1E-55 T 23-04-2016 CYCME_RS05060 8f07b7fcb70f98c12e5993ab3e750ade 139 SUPERFAMILY SSF47240 3 138 1.66E-42 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 PANTHER PTHR11089 3 278 1.3E-71 T 23-04-2016 CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 Gene3D G3DSA:1.10.1580.10 174 266 6.3E-32 T 23-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 Pfam PF01926 50S ribosome-binding GTPase 117 178 1.5E-14 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 PIRSF PIRSF006230 1 277 4.9E-98 T 23-04-2016 IPR016478 GTPase, MTG1 CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 2.8E-103 T 23-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 SUPERFAMILY SSF52540 9 186 3.52E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 Gene3D G3DSA:3.40.50.300 16 171 1.3E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 178 6.1E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS04740 f884642a87cc6aa2c6261273a090bf1c 306 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 117 137 6.1E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CYCME_RS10175 655233b896935bc854ee3a441dddb520 276 SUPERFAMILY SSF53474 7 272 1.89E-70 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10175 655233b896935bc854ee3a441dddb520 276 PANTHER PTHR10992 11 273 2.2E-55 T 23-04-2016 CYCME_RS10175 655233b896935bc854ee3a441dddb520 276 Gene3D G3DSA:3.40.50.1820 10 273 4.5E-73 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10175 655233b896935bc854ee3a441dddb520 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 8.4E-26 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS10175 655233b896935bc854ee3a441dddb520 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 8.4E-26 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS10175 655233b896935bc854ee3a441dddb520 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 8.4E-26 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS10175 655233b896935bc854ee3a441dddb520 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 8.4E-26 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS10175 655233b896935bc854ee3a441dddb520 276 Pfam PF00561 alpha/beta hydrolase fold 28 258 6.9E-27 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 Pfam PF01966 HD domain 228 309 9.4E-9 T 23-04-2016 IPR006674 HD domain CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 Pfam PF01743 Poly A polymerase head domain 3 121 5.5E-19 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 148 210 1.2E-11 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 51.319 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 SMART SM00471 223 337 0.0076 T 23-04-2016 IPR003607 HD/PDEase domain CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 SUPERFAMILY SSF81891 119 360 1.44E-51 T 23-04-2016 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 Hamap MF_01262 CCA-adding enzyme [cca]. 1 400 40.265 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 PIRSF PIRSF000813 1 407 1.4E-188 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 Gene3D G3DSA:3.30.460.10 1 120 2.4E-28 T 23-04-2016 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 Gene3D G3DSA:1.10.3090.10 121 359 2.0E-53 T 23-04-2016 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 PANTHER PTHR13734 1 298 1.3E-69 T 23-04-2016 CYCME_RS00470 f9230fb2073aaa46c2cb261d8282b083 408 SUPERFAMILY SSF81301 1 118 4.8E-28 T 23-04-2016 CYCME_RS07370 6ffcba30dcc147db0952ed53df6d4aa7 231 Hamap MF_00201 DNA repair protein RecO [recO]. 3 230 17.665 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CYCME_RS07370 6ffcba30dcc147db0952ed53df6d4aa7 231 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 229 1.1E-22 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CYCME_RS07370 6ffcba30dcc147db0952ed53df6d4aa7 231 SUPERFAMILY SSF57863 87 189 3.4E-7 T 23-04-2016 CYCME_RS07370 6ffcba30dcc147db0952ed53df6d4aa7 231 Gene3D G3DSA:2.40.50.140 2 74 2.6E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS07370 6ffcba30dcc147db0952ed53df6d4aa7 231 SUPERFAMILY SSF50249 2 75 4.63E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS07370 6ffcba30dcc147db0952ed53df6d4aa7 231 Pfam PF02565 Recombination protein O C terminal 85 227 3.3E-17 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CYCME_RS07370 6ffcba30dcc147db0952ed53df6d4aa7 231 Pfam PF11967 Recombination protein O N terminal 6 75 2.0E-14 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal CYCME_RS07370 6ffcba30dcc147db0952ed53df6d4aa7 231 PANTHER PTHR33991 3 231 1.5E-31 T 23-04-2016 CYCME_RS11240 3ec489a692c033cb47819900326d0132 98 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 7 94 1.6E-25 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS11240 3ec489a692c033cb47819900326d0132 98 SUPERFAMILY SSF55248 7 95 8.89E-29 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS11240 3ec489a692c033cb47819900326d0132 98 PANTHER PTHR12599 9 95 1.6E-30 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS11240 3ec489a692c033cb47819900326d0132 98 Gene3D G3DSA:3.30.1360.20 6 95 1.6E-29 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS11240 3ec489a692c033cb47819900326d0132 98 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 20.924 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CYCME_RS08160 06fed98a4a569558a50187258eaabea1 508 PANTHER PTHR30282 1 508 1.8E-220 T 23-04-2016 CYCME_RS08160 06fed98a4a569558a50187258eaabea1 508 Pfam PF03806 AbgT putative transporter family 11 503 6.9E-187 T 23-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CYCME_RS08160 06fed98a4a569558a50187258eaabea1 508 PANTHER PTHR30282:SF0 1 508 1.8E-220 T 23-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 PANTHER PTHR11562:SF18 7 299 3.3E-92 T 23-04-2016 CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 PANTHER PTHR11562 7 299 3.3E-92 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 Pfam PF01545 Cation efflux family 16 208 1.2E-43 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 Gene3D G3DSA:1.20.1510.10 12 207 1.4E-48 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 SUPERFAMILY SSF160240 211 292 6.28E-20 T 23-04-2016 CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 291 2.2E-69 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 SUPERFAMILY SSF161111 10 209 1.03E-52 T 23-04-2016 CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 Gene3D G3DSA:3.30.70.1350 209 292 6.3E-24 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CYCME_RS00125 79f69270c873c1cc50d2afe753447252 378 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 290 2.8E-23 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CYCME_RS11280 896bfe84743933fd691ff1d0cd35dce7 258 Gene3D G3DSA:3.30.65.10 218 253 7.9E-8 T 23-04-2016 CYCME_RS11280 896bfe84743933fd691ff1d0cd35dce7 258 SUPERFAMILY SSF57783 217 254 6.97E-7 T 23-04-2016 CYCME_RS11280 896bfe84743933fd691ff1d0cd35dce7 258 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 219 255 7.8E-11 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CYCME_RS11280 896bfe84743933fd691ff1d0cd35dce7 258 Pfam PF08378 Nuclease-related domain 33 144 2.1E-28 T 23-04-2016 IPR011528 Nuclease-related domain, NERD CYCME_RS10315 e4114b878c820e922ef2936ffb96876f 436 Gene3D G3DSA:2.50.20.10 129 283 1.4E-58 T 23-04-2016 CYCME_RS10315 e4114b878c820e922ef2936ffb96876f 436 Gene3D G3DSA:2.50.20.10 323 432 1.4E-58 T 23-04-2016 CYCME_RS10315 e4114b878c820e922ef2936ffb96876f 436 Pfam PF07044 Protein of unknown function (DUF1329) 50 432 5.3E-77 T 23-04-2016 IPR010752 Protein of unknown function DUF1329 CYCME_RS06295 f13163d907b9144824f6ffd11deb8a2a 625 Pfam PF03239 Iron permease FTR1 family 301 483 1.3E-15 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CYCME_RS06295 f13163d907b9144824f6ffd11deb8a2a 625 Gene3D G3DSA:1.10.760.10 110 204 4.0E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06295 f13163d907b9144824f6ffd11deb8a2a 625 PANTHER PTHR31632:SF4 356 614 1.4E-46 T 23-04-2016 CYCME_RS06295 f13163d907b9144824f6ffd11deb8a2a 625 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 119 197 4.7E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06295 f13163d907b9144824f6ffd11deb8a2a 625 SUPERFAMILY SSF46626 108 201 3.15E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS06295 f13163d907b9144824f6ffd11deb8a2a 625 PANTHER PTHR31632 356 614 1.4E-46 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 Pfam PF08245 Mur ligase middle domain 108 293 9.2E-24 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 PANTHER PTHR23135 1 450 1.4E-240 T 23-04-2016 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 SUPERFAMILY SSF53244 315 448 2.22E-36 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 Pfam PF01225 Mur ligase family, catalytic domain 3 102 7.3E-19 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 Gene3D G3DSA:3.40.50.720 2 90 2.1E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 2.7E-211 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 PANTHER PTHR23135:SF17 1 450 1.4E-240 T 23-04-2016 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 Gene3D G3DSA:3.40.1190.10 93 316 3.2E-88 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 368 3.0E-10 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 Gene3D G3DSA:3.90.190.20 317 450 3.6E-30 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 SUPERFAMILY SSF51984 2 90 1.96E-22 T 23-04-2016 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 SUPERFAMILY SSF53623 94 313 3.53E-52 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CYCME_RS02830 8e9ab834e505965e1d9195d7b167558e 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 56.462 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 CYCME_RS03170 a6d155ebc6c6c432d323cc6ffdfc84e9 439 Gene3D G3DSA:3.30.830.10 25 237 1.3E-42 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CYCME_RS03170 a6d155ebc6c6c432d323cc6ffdfc84e9 439 Pfam PF05193 Peptidase M16 inactive domain 191 366 1.5E-33 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CYCME_RS03170 a6d155ebc6c6c432d323cc6ffdfc84e9 439 PANTHER PTHR11851 32 429 5.3E-70 T 23-04-2016 CYCME_RS03170 a6d155ebc6c6c432d323cc6ffdfc84e9 439 Pfam PF00675 Insulinase (Peptidase family M16) 50 181 6.7E-9 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CYCME_RS03170 a6d155ebc6c6c432d323cc6ffdfc84e9 439 Gene3D G3DSA:3.30.830.10 251 433 7.3E-36 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CYCME_RS03170 a6d155ebc6c6c432d323cc6ffdfc84e9 439 SUPERFAMILY SSF63411 245 432 2.0E-43 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CYCME_RS03170 a6d155ebc6c6c432d323cc6ffdfc84e9 439 PANTHER PTHR11851:SF140 32 429 5.3E-70 T 23-04-2016 CYCME_RS03170 a6d155ebc6c6c432d323cc6ffdfc84e9 439 SUPERFAMILY SSF63411 22 230 3.67E-45 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CYCME_RS02275 108dc1163d4ee566dd302331ea204b4c 186 PANTHER PTHR30576 1 186 3.5E-70 T 23-04-2016 CYCME_RS02275 108dc1163d4ee566dd302331ea204b4c 186 Pfam PF02397 Bacterial sugar transferase 2 179 8.2E-50 T 23-04-2016 IPR003362 Bacterial sugar transferase CYCME_RS06785 51ec8e3e5aabfbd2905c89e9e0c27ce0 507 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 184 7.7E-39 T 23-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices CYCME_RS06785 51ec8e3e5aabfbd2905c89e9e0c27ce0 507 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 193 503 2.5E-131 T 23-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase CYCME_RS01545 f59864d50c9616af1dc178fe41964877 132 Pfam PF00581 Rhodanese-like domain 8 108 7.3E-15 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS01545 f59864d50c9616af1dc178fe41964877 132 SUPERFAMILY SSF52821 3 131 1.22E-24 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS01545 f59864d50c9616af1dc178fe41964877 132 PANTHER PTHR12231 7 107 2.5E-14 T 23-04-2016 CYCME_RS01545 f59864d50c9616af1dc178fe41964877 132 SMART SM00450 8 115 9.9E-12 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS01545 f59864d50c9616af1dc178fe41964877 132 Gene3D G3DSA:3.40.250.10 3 131 6.5E-34 T 23-04-2016 IPR001763 Rhodanese-like domain CYCME_RS00680 f1235a5e1626202818cf25fcbb904a8d 287 Pfam PF01797 Transposase IS200 like 13 120 3.4E-12 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00680 f1235a5e1626202818cf25fcbb904a8d 287 PANTHER PTHR34322 2 211 6.0E-35 T 23-04-2016 CYCME_RS00680 f1235a5e1626202818cf25fcbb904a8d 287 SUPERFAMILY SSF143422 1 129 3.4E-26 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00680 f1235a5e1626202818cf25fcbb904a8d 287 SMART SM01321 9 123 1.5E-40 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00680 f1235a5e1626202818cf25fcbb904a8d 287 Gene3D G3DSA:3.30.70.1290 13 125 7.5E-14 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CYCME_RS00680 f1235a5e1626202818cf25fcbb904a8d 287 Gene3D G3DSA:1.10.260.40 259 279 0.001 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CYCME_RS00680 f1235a5e1626202818cf25fcbb904a8d 287 PANTHER PTHR34322:SF1 2 211 6.0E-35 T 23-04-2016 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 PANTHER PTHR18866 6 596 4.9E-217 T 23-04-2016 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 PANTHER PTHR18866:SF109 6 596 4.9E-217 T 23-04-2016 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 553 570 - T 23-04-2016 IPR001882 Biotin-binding site CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 Gene3D G3DSA:2.40.50.100 530 596 2.4E-22 T 23-04-2016 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 Pfam PF02436 Conserved carboxylase domain 292 488 1.6E-57 T 23-04-2016 IPR003379 Carboxylase, conserved domain CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 590 2.0E-256 T 23-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 SUPERFAMILY SSF51230 530 596 1.83E-18 T 23-04-2016 IPR011053 Single hybrid motif CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 Pfam PF00682 HMGL-like 5 270 1.3E-55 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 Gene3D G3DSA:3.20.20.70 2 282 1.6E-113 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 SUPERFAMILY SSF89000 297 464 3.1E-49 T 23-04-2016 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 SUPERFAMILY SSF51569 1 299 7.33E-87 T 23-04-2016 CYCME_RS09075 5f8829f1bae2feb129a72f123768d1ea 597 Pfam PF00364 Biotin-requiring enzyme 532 596 1.7E-16 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CYCME_RS08435 5d5b292ce0c9c740c63eff246a949a18 173 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 163 7.5E-43 T 23-04-2016 IPR018639 Domain of unknown function DUF2062 CYCME_RS08435 5d5b292ce0c9c740c63eff246a949a18 173 PANTHER PTHR40547 1 173 1.3E-38 T 23-04-2016 CYCME_RS08435 5d5b292ce0c9c740c63eff246a949a18 173 PANTHER PTHR40547:SF1 1 173 1.3E-38 T 23-04-2016 CYCME_RS02220 dc7e14153098f3e3743e8d931b394aa4 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 359 1.5E-119 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CYCME_RS02220 dc7e14153098f3e3743e8d931b394aa4 373 SUPERFAMILY SSF53383 13 365 3.03E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS02220 dc7e14153098f3e3743e8d931b394aa4 373 PANTHER PTHR30244 1 367 1.0E-125 T 23-04-2016 CYCME_RS02220 dc7e14153098f3e3743e8d931b394aa4 373 Gene3D G3DSA:3.90.1150.10 247 366 8.2E-34 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS02220 dc7e14153098f3e3743e8d931b394aa4 373 Gene3D G3DSA:3.40.640.10 14 244 2.1E-84 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS02220 dc7e14153098f3e3743e8d931b394aa4 373 PIRSF PIRSF000390 5 368 4.0E-106 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CYCME_RS02220 dc7e14153098f3e3743e8d931b394aa4 373 PANTHER PTHR30244:SF13 1 367 1.0E-125 T 23-04-2016 CYCME_RS07870 f81b438aa83e63d24f06d3201428b84b 178 PANTHER PTHR41534 9 178 2.1E-25 T 23-04-2016 CYCME_RS07870 f81b438aa83e63d24f06d3201428b84b 178 SUPERFAMILY SSF54427 11 177 2.03E-40 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS07870 f81b438aa83e63d24f06d3201428b84b 178 Gene3D G3DSA:3.10.450.50 4 178 3.0E-55 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS07870 f81b438aa83e63d24f06d3201428b84b 178 Pfam PF00866 Ring hydroxylating beta subunit 25 170 2.8E-41 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS07870 f81b438aa83e63d24f06d3201428b84b 178 PANTHER PTHR41534:SF2 9 178 2.1E-25 T 23-04-2016 CYCME_RS09310 d9a821b05d0eda6d79d5560bf4f82946 231 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 101 229 1.0E-18 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CYCME_RS09310 d9a821b05d0eda6d79d5560bf4f82946 231 PANTHER PTHR38685:SF1 45 228 2.6E-22 T 23-04-2016 CYCME_RS09310 d9a821b05d0eda6d79d5560bf4f82946 231 PANTHER PTHR38685 45 228 2.6E-22 T 23-04-2016 CYCME_RS09310 d9a821b05d0eda6d79d5560bf4f82946 231 Gene3D G3DSA:3.30.1400.10 99 229 1.2E-34 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CYCME_RS09310 d9a821b05d0eda6d79d5560bf4f82946 231 SMART SM00771 98 228 5.0E-27 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CYCME_RS09310 d9a821b05d0eda6d79d5560bf4f82946 231 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 101 227 1.7E-36 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CYCME_RS09310 d9a821b05d0eda6d79d5560bf4f82946 231 SUPERFAMILY SSF64383 100 228 1.57E-31 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CYCME_RS03965 6e6a9b36d1ad2cead9f13194b4e0429f 278 PANTHER PTHR23088 1 277 2.5E-104 T 23-04-2016 CYCME_RS03965 6e6a9b36d1ad2cead9f13194b4e0429f 278 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 161 181 - T 23-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site CYCME_RS03965 6e6a9b36d1ad2cead9f13194b4e0429f 278 SUPERFAMILY SSF56317 6 276 7.85E-80 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS03965 6e6a9b36d1ad2cead9f13194b4e0429f 278 Gene3D G3DSA:3.60.110.10 4 277 1.2E-85 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS03965 6e6a9b36d1ad2cead9f13194b4e0429f 278 Pfam PF00795 Carbon-nitrogen hydrolase 12 264 1.5E-53 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CYCME_RS03965 6e6a9b36d1ad2cead9f13194b4e0429f 278 PANTHER PTHR23088:SF27 1 277 2.5E-104 T 23-04-2016 CYCME_RS07060 e8e4dd8a0d4379a67d116e8a690d9049 205 Gene3D G3DSA:2.160.10.10 43 162 2.0E-31 T 23-04-2016 CYCME_RS07060 e8e4dd8a0d4379a67d116e8a690d9049 205 SUPERFAMILY SSF51161 43 154 1.94E-32 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS07060 e8e4dd8a0d4379a67d116e8a690d9049 205 PANTHER PTHR23416 44 154 7.5E-24 T 23-04-2016 CYCME_RS07060 e8e4dd8a0d4379a67d116e8a690d9049 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 133 3.0E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS07060 e8e4dd8a0d4379a67d116e8a690d9049 205 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 107 135 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 Gene3D G3DSA:3.10.580.10 145 269 1.4E-18 T 23-04-2016 CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 PANTHER PTHR22777 5 365 6.5E-107 T 23-04-2016 CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 SUPERFAMILY SSF54631 150 289 1.83E-26 T 23-04-2016 CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 SMART SM01091 290 367 1.5E-13 T 23-04-2016 IPR005170 Transporter-associated domain CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 Gene3D G3DSA:3.30.465.10 270 364 6.4E-19 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 PANTHER PTHR22777:SF3 5 365 6.5E-107 T 23-04-2016 CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 Pfam PF03471 Transporter associated domain 291 363 6.1E-13 T 23-04-2016 IPR005170 Transporter-associated domain CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 Pfam PF00571 CBS domain 228 274 0.0011 T 23-04-2016 IPR000644 CBS domain CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 Pfam PF01595 Domain of unknown function DUF21 3 131 5.8E-30 T 23-04-2016 IPR002550 Domain of unknown function DUF21 CYCME_RS09130 918d741ee271c87784a0d06cc09dbdd7 367 SUPERFAMILY SSF56176 287 363 4.36E-16 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CYCME_RS06590 7e9d636e53e195889e461941adf12adf 425 SUPERFAMILY SSF56954 2 400 7.46E-48 T 23-04-2016 CYCME_RS06590 7e9d636e53e195889e461941adf12adf 425 Gene3D G3DSA:1.20.1600.10 26 400 1.4E-34 T 23-04-2016 CYCME_RS06590 7e9d636e53e195889e461941adf12adf 425 Pfam PF02321 Outer membrane efflux protein 28 201 1.8E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS06590 7e9d636e53e195889e461941adf12adf 425 Pfam PF02321 Outer membrane efflux protein 230 399 4.9E-9 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS06590 7e9d636e53e195889e461941adf12adf 425 PANTHER PTHR30203 28 420 2.7E-28 T 23-04-2016 CYCME_RS03035 3120463402ea8459360814390b46ba61 205 Gene3D G3DSA:3.40.50.300 87 203 2.2E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03035 3120463402ea8459360814390b46ba61 205 Gene3D G3DSA:3.40.50.300 3 27 2.2E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03035 3120463402ea8459360814390b46ba61 205 SUPERFAMILY SSF52540 4 187 5.61E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03035 3120463402ea8459360814390b46ba61 205 Pfam PF00625 Guanylate kinase 6 183 2.6E-52 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CYCME_RS03035 3120463402ea8459360814390b46ba61 205 Gene3D G3DSA:3.30.63.10 34 86 3.7E-24 T 23-04-2016 CYCME_RS03035 3120463402ea8459360814390b46ba61 205 PANTHER PTHR23117:SF13 1 203 2.8E-84 T 23-04-2016 CYCME_RS03035 3120463402ea8459360814390b46ba61 205 PANTHER PTHR23117 1 203 2.8E-84 T 23-04-2016 CYCME_RS03035 3120463402ea8459360814390b46ba61 205 SMART SM00072 4 186 1.3E-56 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CYCME_RS03035 3120463402ea8459360814390b46ba61 205 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CYCME_RS03035 3120463402ea8459360814390b46ba61 205 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 183 4.7E-72 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CYCME_RS03035 3120463402ea8459360814390b46ba61 205 Hamap MF_00328 Guanylate kinase [gmk]. 3 186 35.968 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CYCME_RS08555 6db59eeb94023cd74d444ba8dcba0ce1 209 SUPERFAMILY SSF48452 47 178 5.69E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS08555 6db59eeb94023cd74d444ba8dcba0ce1 209 Gene3D G3DSA:1.25.40.10 45 183 1.4E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS03970 87a052c5daf3d08f3428661306ba638d 480 SUPERFAMILY SSF111283 21 478 7.85E-133 T 23-04-2016 CYCME_RS03970 87a052c5daf3d08f3428661306ba638d 480 PANTHER PTHR30624:SF4 14 480 2.0E-234 T 23-04-2016 CYCME_RS03970 87a052c5daf3d08f3428661306ba638d 480 PANTHER PTHR30624 14 480 2.0E-234 T 23-04-2016 CYCME_RS03970 87a052c5daf3d08f3428661306ba638d 480 Pfam PF01523 Putative modulator of DNA gyrase 37 330 1.1E-64 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CYCME_RS03970 87a052c5daf3d08f3428661306ba638d 480 PIRSF PIRSF004919 17 479 2.7E-144 T 23-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CYCME_RS01740 66d43c31b8ad8602dc0fb5c1f629452a 119 PANTHER PTHR34299:SF1 1 119 1.6E-29 T 23-04-2016 CYCME_RS01740 66d43c31b8ad8602dc0fb5c1f629452a 119 Gene3D G3DSA:1.10.3830.10 6 119 5.9E-38 T 23-04-2016 CYCME_RS01740 66d43c31b8ad8602dc0fb5c1f629452a 119 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CYCME_RS01740 66d43c31b8ad8602dc0fb5c1f629452a 119 Pfam PF01219 Prokaryotic diacylglycerol kinase 18 118 1.1E-31 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CYCME_RS01740 66d43c31b8ad8602dc0fb5c1f629452a 119 PANTHER PTHR34299 1 119 1.6E-29 T 23-04-2016 CYCME_RS05640 09c024b35224874c6548224634417a79 133 Pfam PF01124 MAPEG family 6 128 9.6E-16 T 23-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CYCME_RS05640 09c024b35224874c6548224634417a79 133 Gene3D G3DSA:1.20.120.550 3 130 1.3E-13 T 23-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CYCME_RS05640 09c024b35224874c6548224634417a79 133 SUPERFAMILY SSF161084 3 125 6.02E-19 T 23-04-2016 CYCME_RS05640 09c024b35224874c6548224634417a79 133 PANTHER PTHR35371 11 133 7.0E-13 T 23-04-2016 CYCME_RS09110 5519a27b1b97f655ce4177ebd65ceb64 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 105 1.7E-28 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CYCME_RS09110 5519a27b1b97f655ce4177ebd65ceb64 105 PANTHER PTHR34653 1 105 2.0E-19 T 23-04-2016 CYCME_RS09110 5519a27b1b97f655ce4177ebd65ceb64 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 6 105 8.8E-23 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CYCME_RS09110 5519a27b1b97f655ce4177ebd65ceb64 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 105 18.353 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CYCME_RS09110 5519a27b1b97f655ce4177ebd65ceb64 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 8.7E-15 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CYCME_RS09110 5519a27b1b97f655ce4177ebd65ceb64 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 8.7E-15 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CYCME_RS09110 5519a27b1b97f655ce4177ebd65ceb64 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 8.7E-15 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CYCME_RS05665 c23250a7531b20d9c2843aa16a44b8a8 350 SUPERFAMILY SSF54593 5 128 2.0E-10 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS05665 c23250a7531b20d9c2843aa16a44b8a8 350 Gene3D G3DSA:3.10.180.10 6 118 1.3E-8 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS05665 c23250a7531b20d9c2843aa16a44b8a8 350 Gene3D G3DSA:3.10.180.10 184 327 2.9E-6 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS05665 c23250a7531b20d9c2843aa16a44b8a8 350 SUPERFAMILY SSF54593 183 330 1.86E-7 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS05665 c23250a7531b20d9c2843aa16a44b8a8 350 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 121 4.3E-10 T 23-04-2016 CYCME_RS05665 c23250a7531b20d9c2843aa16a44b8a8 350 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 187 306 2.0E-7 T 23-04-2016 CYCME_RS07145 893b335fd18f99ba43ff44ea0e26514b 296 SUPERFAMILY SSF52540 5 260 9.81E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07145 893b335fd18f99ba43ff44ea0e26514b 296 PANTHER PTHR35894:SF1 2 273 1.0E-73 T 23-04-2016 CYCME_RS07145 893b335fd18f99ba43ff44ea0e26514b 296 Pfam PF13401 AAA domain 42 170 2.4E-21 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS07145 893b335fd18f99ba43ff44ea0e26514b 296 Gene3D G3DSA:3.40.50.300 40 183 1.9E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07145 893b335fd18f99ba43ff44ea0e26514b 296 SMART SM00382 42 194 2.1E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS07145 893b335fd18f99ba43ff44ea0e26514b 296 PANTHER PTHR35894 2 273 1.0E-73 T 23-04-2016 CYCME_RS06690 c26cc6f5f3bb96987a6377278563125c 140 PANTHER PTHR21256 22 122 8.1E-50 T 23-04-2016 CYCME_RS06690 c26cc6f5f3bb96987a6377278563125c 140 SUPERFAMILY SSF141734 24 131 5.23E-47 T 23-04-2016 CYCME_RS06690 c26cc6f5f3bb96987a6377278563125c 140 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 23 126 29.862 T 23-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CYCME_RS06690 c26cc6f5f3bb96987a6377278563125c 140 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 49 122 1.2E-34 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CYCME_RS06690 c26cc6f5f3bb96987a6377278563125c 140 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 72 125 2.0E-15 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CYCME_RS06120 19bf8c9fdc47ad97b7f5df39ab2a0ddf 323 SUPERFAMILY SSF52096 212 272 5.08E-41 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS06120 19bf8c9fdc47ad97b7f5df39ab2a0ddf 323 SUPERFAMILY SSF52096 61 183 5.08E-41 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS06120 19bf8c9fdc47ad97b7f5df39ab2a0ddf 323 Pfam PF01343 Peptidase family S49 140 278 1.0E-32 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CYCME_RS06120 19bf8c9fdc47ad97b7f5df39ab2a0ddf 323 PANTHER PTHR30341:SF1 17 305 3.6E-92 T 23-04-2016 CYCME_RS06120 19bf8c9fdc47ad97b7f5df39ab2a0ddf 323 PANTHER PTHR30341 17 305 3.6E-92 T 23-04-2016 CYCME_RS06120 19bf8c9fdc47ad97b7f5df39ab2a0ddf 323 Gene3D G3DSA:3.90.226.10 45 175 6.8E-47 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS06120 19bf8c9fdc47ad97b7f5df39ab2a0ddf 323 Gene3D G3DSA:3.90.226.10 213 299 6.8E-47 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS00540 097230e215eaa0caff9bfec6e994d282 205 SUPERFAMILY SSF52833 14 200 3.36E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS00540 097230e215eaa0caff9bfec6e994d282 205 PANTHER PTHR13887 15 205 5.7E-19 T 23-04-2016 CYCME_RS00540 097230e215eaa0caff9bfec6e994d282 205 Pfam PF01323 DSBA-like thioredoxin domain 14 197 1.0E-30 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CYCME_RS00540 097230e215eaa0caff9bfec6e994d282 205 PANTHER PTHR13887:SF22 15 205 5.7E-19 T 23-04-2016 CYCME_RS00540 097230e215eaa0caff9bfec6e994d282 205 PIRSF PIRSF006386 9 204 2.0E-37 T 23-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa CYCME_RS00540 097230e215eaa0caff9bfec6e994d282 205 Gene3D G3DSA:3.40.30.10 13 198 4.7E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.893 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 PANTHER PTHR11655 1 176 2.3E-83 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 Gene3D G3DSA:3.90.930.12 83 177 1.4E-41 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 PANTHER PTHR11655:SF14 1 176 2.3E-83 T 23-04-2016 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 PIRSF PIRSF002162 1 177 6.7E-46 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.7E-35 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.7E-35 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 6.7E-35 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 Gene3D G3DSA:3.90.930.12 2 82 2.1E-23 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 SUPERFAMILY SSF56053 2 82 5.43E-21 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 Pfam PF00347 Ribosomal protein L6 91 164 6.6E-21 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 Pfam PF00347 Ribosomal protein L6 12 82 6.0E-11 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 SUPERFAMILY SSF56053 83 177 3.66E-38 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 6.6E-72 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CYCME_RS03730 fea219cd064c35e11eb1d9f21cd36c50 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS09670 b29e22d55e430fc01d9e0dab56821413 280 Gene3D G3DSA:2.70.70.10 125 270 3.6E-44 T 23-04-2016 CYCME_RS09670 b29e22d55e430fc01d9e0dab56821413 280 Pfam PF01551 Peptidase family M23 171 265 2.7E-30 T 23-04-2016 IPR016047 Peptidase M23 CYCME_RS09670 b29e22d55e430fc01d9e0dab56821413 280 PANTHER PTHR21666 110 269 2.0E-42 T 23-04-2016 CYCME_RS09670 b29e22d55e430fc01d9e0dab56821413 280 Gene3D G3DSA:2.60.40.1590 22 116 4.2E-27 T 23-04-2016 CYCME_RS09670 b29e22d55e430fc01d9e0dab56821413 280 SUPERFAMILY SSF51261 100 269 5.76E-50 T 23-04-2016 IPR011055 Duplicated hybrid motif CYCME_RS02625 ad49529fb8b1a359dfdb9065851888cb 383 Pfam PF00691 OmpA family 279 375 9.0E-17 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS02625 ad49529fb8b1a359dfdb9065851888cb 383 SUPERFAMILY SSF103088 276 381 4.05E-25 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS02625 ad49529fb8b1a359dfdb9065851888cb 383 Gene3D G3DSA:3.30.1330.60 276 381 5.3E-26 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS02625 ad49529fb8b1a359dfdb9065851888cb 383 PANTHER PTHR30128 241 381 1.9E-23 T 23-04-2016 CYCME_RS01265 f65dacd086835760508cc91ab5bfac39 283 Gene3D G3DSA:3.90.850.10 43 273 1.7E-39 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS01265 f65dacd086835760508cc91ab5bfac39 283 PANTHER PTHR30143 12 283 3.4E-26 T 23-04-2016 CYCME_RS01265 f65dacd086835760508cc91ab5bfac39 283 SUPERFAMILY SSF56529 41 272 2.29E-35 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CYCME_RS07065 546913e7eaa55d0147cafab735686530 356 Gene3D G3DSA:3.40.50.2000 233 335 2.6E-14 T 23-04-2016 CYCME_RS07065 546913e7eaa55d0147cafab735686530 356 PANTHER PTHR12526 65 354 6.5E-36 T 23-04-2016 CYCME_RS07065 546913e7eaa55d0147cafab735686530 356 PANTHER PTHR12526 1 40 6.5E-36 T 23-04-2016 CYCME_RS07065 546913e7eaa55d0147cafab735686530 356 Pfam PF00534 Glycosyl transferases group 1 197 325 6.0E-16 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CYCME_RS07065 546913e7eaa55d0147cafab735686530 356 SUPERFAMILY SSF53756 3 351 5.38E-50 T 23-04-2016 CYCME_RS07065 546913e7eaa55d0147cafab735686530 356 Pfam PF16994 Glycosyl-transferase family 4 3 178 9.4E-7 T 23-04-2016 CYCME_RS01510 d8564f2014354437a5b908dbd55359be 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 48.742 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CYCME_RS01510 d8564f2014354437a5b908dbd55359be 257 Pfam PF00977 Histidine biosynthesis protein 6 239 1.0E-90 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 CYCME_RS01510 d8564f2014354437a5b908dbd55359be 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 1.6E-116 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CYCME_RS01510 d8564f2014354437a5b908dbd55359be 257 PANTHER PTHR21235:SF2 3 257 1.4E-125 T 23-04-2016 CYCME_RS01510 d8564f2014354437a5b908dbd55359be 257 SUPERFAMILY SSF51366 3 256 6.99E-83 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CYCME_RS01510 d8564f2014354437a5b908dbd55359be 257 Gene3D G3DSA:3.20.20.70 5 257 3.9E-109 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS01510 d8564f2014354437a5b908dbd55359be 257 PANTHER PTHR21235 3 257 1.4E-125 T 23-04-2016 CYCME_RS01075 c3bfae024b8645534fd50c90ea61ef2c 112 Gene3D G3DSA:3.90.1150.10 4 70 9.6E-8 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS01075 c3bfae024b8645534fd50c90ea61ef2c 112 SUPERFAMILY SSF53383 1 110 7.23E-12 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS12205 c3bfae024b8645534fd50c90ea61ef2c 112 Gene3D G3DSA:3.90.1150.10 4 70 9.6E-8 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS12205 c3bfae024b8645534fd50c90ea61ef2c 112 SUPERFAMILY SSF53383 1 110 7.23E-12 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS08590 19fe30c3f2cee6369d054eccd75bbe19 119 Pfam PF13806 Rieske-like [2Fe-2S] domain 15 115 7.0E-37 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CYCME_RS08590 19fe30c3f2cee6369d054eccd75bbe19 119 Gene3D G3DSA:2.102.10.10 13 117 9.3E-40 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS08590 19fe30c3f2cee6369d054eccd75bbe19 119 PANTHER PTHR40562 4 115 1.5E-28 T 23-04-2016 CYCME_RS08590 19fe30c3f2cee6369d054eccd75bbe19 119 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 14 115 2.3E-35 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CYCME_RS08590 19fe30c3f2cee6369d054eccd75bbe19 119 SUPERFAMILY SSF50022 13 118 5.93E-35 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12190 4d05b37e1765aac8fabe80d3d43ea5b4 552 Gene3D G3DSA:3.40.50.300 128 260 3.1E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12190 4d05b37e1765aac8fabe80d3d43ea5b4 552 SUPERFAMILY SSF52540 133 270 4.13E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12190 4d05b37e1765aac8fabe80d3d43ea5b4 552 SUPERFAMILY SSF52540 311 386 4.13E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12190 4d05b37e1765aac8fabe80d3d43ea5b4 552 Pfam PF11426 Tn7 transposition regulator TnsC 505 548 8.0E-6 T 23-04-2016 IPR021542 Tn7 transposition regulator TnsC CYCME_RS12190 4d05b37e1765aac8fabe80d3d43ea5b4 552 Pfam PF13401 AAA domain 130 277 2.7E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS01090 4d05b37e1765aac8fabe80d3d43ea5b4 552 Gene3D G3DSA:3.40.50.300 128 260 3.1E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01090 4d05b37e1765aac8fabe80d3d43ea5b4 552 SUPERFAMILY SSF52540 133 270 4.13E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01090 4d05b37e1765aac8fabe80d3d43ea5b4 552 SUPERFAMILY SSF52540 311 386 4.13E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01090 4d05b37e1765aac8fabe80d3d43ea5b4 552 Pfam PF11426 Tn7 transposition regulator TnsC 505 548 8.0E-6 T 23-04-2016 IPR021542 Tn7 transposition regulator TnsC CYCME_RS01090 4d05b37e1765aac8fabe80d3d43ea5b4 552 Pfam PF13401 AAA domain 130 277 2.7E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS11955 ceca4bb2f4a970ba9caad0582e7242a1 279 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 15 111 1.5E-30 T 23-04-2016 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain CYCME_RS11955 ceca4bb2f4a970ba9caad0582e7242a1 279 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 115 270 7.2E-53 T 23-04-2016 IPR021561 Transcriptional regulator, AbiEi_3 antitoxin, Type IV TA system CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 397 4.6E-22 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 213 3.8E-21 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 PANTHER PTHR10909 367 399 7.3E-145 T 23-04-2016 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 SUPERFAMILY SSF56645 2 245 1.57E-72 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 Gene3D G3DSA:1.10.540.10 2 119 9.1E-23 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 SUPERFAMILY SSF47203 232 399 3.44E-22 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 PANTHER PTHR10909:SF229 367 399 7.3E-145 T 23-04-2016 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 3.9E-20 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 PANTHER PTHR10909 2 348 7.3E-145 T 23-04-2016 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 Gene3D G3DSA:2.40.110.10 125 222 4.7E-36 T 23-04-2016 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 PANTHER PTHR10909:SF229 2 348 7.3E-145 T 23-04-2016 CYCME_RS06045 1ed9b09f593d5b6e4492337ff2805b8d 399 Gene3D G3DSA:1.20.140.10 223 398 1.5E-29 T 23-04-2016 CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 Gene3D G3DSA:1.10.287.70 4 109 3.4E-10 T 23-04-2016 CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 PANTHER PTHR16254:SF21 8 295 2.4E-27 T 23-04-2016 CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 SUPERFAMILY SSF51735 129 278 4.38E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 Pfam PF07885 Ion channel 24 106 4.4E-6 T 23-04-2016 IPR013099 Potassium channel domain CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 Gene3D G3DSA:3.40.50.720 129 277 1.6E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 Gene3D G3DSA:3.40.50.720 296 430 1.3E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 SUPERFAMILY SSF81324 8 148 6.02E-14 T 23-04-2016 CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 PANTHER PTHR16254 8 295 2.4E-27 T 23-04-2016 CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 Pfam PF02254 TrkA-N domain 299 409 2.8E-14 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 Pfam PF02254 TrkA-N domain 132 249 2.3E-15 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CYCME_RS10860 4b9cd9cc399cbc333e71858c73ced134 577 SUPERFAMILY SSF51735 296 430 2.89E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 PANTHER PTHR11082 4 305 2.4E-145 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 PIRSF PIRSF006621 2 321 3.2E-73 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 Pfam PF01207 Dihydrouridine synthase (Dus) 10 310 8.6E-89 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 Gene3D G3DSA:3.20.20.70 5 248 2.3E-73 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 2 321 49.901 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 8 319 6.5E-140 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 PANTHER PTHR11082:SF29 4 305 2.4E-145 T 23-04-2016 CYCME_RS09065 a30077e839e0157929bbd6fe46ab4afd 326 SUPERFAMILY SSF51395 8 300 9.16E-73 T 23-04-2016 CYCME_RS08905 c3e40235db14794838dae29d90c8fa93 182 PANTHER PTHR13696:SF62 13 179 4.4E-30 T 23-04-2016 CYCME_RS08905 c3e40235db14794838dae29d90c8fa93 182 PANTHER PTHR13696 13 179 4.4E-30 T 23-04-2016 CYCME_RS08905 c3e40235db14794838dae29d90c8fa93 182 SUPERFAMILY SSF117916 81 181 5.23E-28 T 23-04-2016 CYCME_RS08905 c3e40235db14794838dae29d90c8fa93 182 Pfam PF01883 Domain of unknown function DUF59 84 160 6.5E-18 T 23-04-2016 IPR002744 Domain of unknown function DUF59 CYCME_RS08905 c3e40235db14794838dae29d90c8fa93 182 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 8 181 3.7E-67 T 23-04-2016 IPR017776 FeS assembly SUF system protein SufT, putative CYCME_RS00935 0aad4144278a09073dfb162a646ed728 175 SUPERFAMILY SSF52141 3 173 1.35E-29 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS00935 0aad4144278a09073dfb162a646ed728 175 Pfam PF03167 Uracil DNA glycosylase superfamily 15 157 3.4E-14 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS00935 0aad4144278a09073dfb162a646ed728 175 Gene3D G3DSA:3.40.470.10 3 174 2.5E-35 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS00935 0aad4144278a09073dfb162a646ed728 175 PANTHER PTHR12159 3 161 4.3E-25 T 23-04-2016 IPR015637 G/U mismatch-specific DNA glycosylase GO:0006281|GO:0019104 CYCME_RS09625 3bfc948c47e7c70a592904821dd1d0c6 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 5.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS09625 3bfc948c47e7c70a592904821dd1d0c6 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 5.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS09625 3bfc948c47e7c70a592904821dd1d0c6 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 5.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS09625 3bfc948c47e7c70a592904821dd1d0c6 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 5.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS09625 3bfc948c47e7c70a592904821dd1d0c6 280 SUPERFAMILY SSF53474 11 274 1.15E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS09625 3bfc948c47e7c70a592904821dd1d0c6 280 Gene3D G3DSA:3.40.50.1820 6 275 5.1E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS09625 3bfc948c47e7c70a592904821dd1d0c6 280 PANTHER PTHR11614 3 275 1.6E-68 T 23-04-2016 CYCME_RS09625 3bfc948c47e7c70a592904821dd1d0c6 280 Pfam PF12146 Serine aminopeptidase, S33 28 261 1.1E-65 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 CYCME_RS04065 9b6ed09a17ec0b132e5107e3faf6854c 361 Gene3D G3DSA:3.40.640.10 58 257 2.2E-58 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CYCME_RS04065 9b6ed09a17ec0b132e5107e3faf6854c 361 Pfam PF00155 Aminotransferase class I and II 31 354 2.1E-43 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CYCME_RS04065 9b6ed09a17ec0b132e5107e3faf6854c 361 Gene3D G3DSA:3.90.1150.10 258 360 5.7E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CYCME_RS04065 9b6ed09a17ec0b132e5107e3faf6854c 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 359 52.635 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CYCME_RS04065 9b6ed09a17ec0b132e5107e3faf6854c 361 SUPERFAMILY SSF53383 15 358 1.75E-71 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CYCME_RS04065 9b6ed09a17ec0b132e5107e3faf6854c 361 PANTHER PTHR11751:SF347 7 361 5.5E-64 T 23-04-2016 CYCME_RS04065 9b6ed09a17ec0b132e5107e3faf6854c 361 PANTHER PTHR11751 7 361 5.5E-64 T 23-04-2016 CYCME_RS04065 9b6ed09a17ec0b132e5107e3faf6854c 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 357 2.1E-91 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CYCME_RS10685 59dc1790047ecd7f0f25b79ce71cb92f 202 Pfam PF01794 Ferric reductase like transmembrane component 51 163 1.2E-16 T 23-04-2016 IPR013130 Ferric reductase transmembrane component-like domain CYCME_RS10685 59dc1790047ecd7f0f25b79ce71cb92f 202 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 4 201 23.139 T 23-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CYCME_RS10685 59dc1790047ecd7f0f25b79ce71cb92f 202 PANTHER PTHR36964 2 200 7.7E-55 T 23-04-2016 CYCME_RS08700 caaa38e81938985dca850e28597f9e99 169 Gene3D G3DSA:3.40.50.1450 3 149 8.1E-16 T 23-04-2016 IPR023430 Peptidase HybD-like domain CYCME_RS08700 caaa38e81938985dca850e28597f9e99 169 PANTHER PTHR30302 1 162 1.1E-13 T 23-04-2016 CYCME_RS08700 caaa38e81938985dca850e28597f9e99 169 SUPERFAMILY SSF53163 3 149 1.83E-22 T 23-04-2016 IPR023430 Peptidase HybD-like domain CYCME_RS08700 caaa38e81938985dca850e28597f9e99 169 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 144 5.2E-18 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CYCME_RS08700 caaa38e81938985dca850e28597f9e99 169 PANTHER PTHR30302:SF5 1 162 1.1E-13 T 23-04-2016 CYCME_RS05020 0354918c69a15c44f9e946a41909e785 212 PANTHER PTHR19136:SF81 3 210 7.7E-40 T 23-04-2016 CYCME_RS05020 0354918c69a15c44f9e946a41909e785 212 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 9 197 9.3E-58 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 CYCME_RS05020 0354918c69a15c44f9e946a41909e785 212 Pfam PF12804 MobA-like NTP transferase domain 10 166 2.3E-33 T 23-04-2016 IPR025877 MobA-like NTP transferase CYCME_RS05020 0354918c69a15c44f9e946a41909e785 212 Gene3D G3DSA:3.90.550.10 5 206 2.1E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS05020 0354918c69a15c44f9e946a41909e785 212 PANTHER PTHR19136 3 210 7.7E-40 T 23-04-2016 CYCME_RS05020 0354918c69a15c44f9e946a41909e785 212 SUPERFAMILY SSF53448 6 201 2.7E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS05020 0354918c69a15c44f9e946a41909e785 212 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 200 26.614 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 CYCME_RS05875 c15d97f491c76b28fdfec585abb06ac0 253 PANTHER PTHR11941:SF86 4 252 5.8E-87 T 23-04-2016 CYCME_RS05875 c15d97f491c76b28fdfec585abb06ac0 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 6 252 5.0E-51 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CYCME_RS05875 c15d97f491c76b28fdfec585abb06ac0 253 Gene3D G3DSA:3.90.226.10 5 249 2.7E-63 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05875 c15d97f491c76b28fdfec585abb06ac0 253 SUPERFAMILY SSF52096 5 252 9.39E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS05875 c15d97f491c76b28fdfec585abb06ac0 253 PANTHER PTHR11941 4 252 5.8E-87 T 23-04-2016 CYCME_RS05875 c15d97f491c76b28fdfec585abb06ac0 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CYCME_RS02305 a52977ebe57b5aeb8a2bc18f18152189 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.6E-47 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CYCME_RS02305 a52977ebe57b5aeb8a2bc18f18152189 130 SUPERFAMILY SSF54211 6 130 3.41E-47 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS02305 a52977ebe57b5aeb8a2bc18f18152189 130 PANTHER PTHR21569 1 130 4.8E-69 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CYCME_RS02305 a52977ebe57b5aeb8a2bc18f18152189 130 Gene3D G3DSA:3.30.230.10 5 130 1.1E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS02305 a52977ebe57b5aeb8a2bc18f18152189 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.622 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid CYCME_RS02305 a52977ebe57b5aeb8a2bc18f18152189 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 PANTHER PTHR11751 15 77 8.2E-18 T 23-04-2016 CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 Gene3D G3DSA:1.10.10.10 7 78 2.4E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 Pfam PF16930 Putative porin 106 206 8.0E-10 T 23-04-2016 IPR032638 Putative bacterial porin CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 74 3.2E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 SMART SM00345 18 76 7.7E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 SUPERFAMILY SSF56935 89 204 4.58E-7 T 23-04-2016 CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 PANTHER PTHR11751:SF292 15 77 8.2E-18 T 23-04-2016 CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 4.5E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 4.5E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 Gene3D G3DSA:2.40.160.10 83 204 2.1E-7 T 23-04-2016 IPR023614 Porin domain CYCME_RS12830 e49c29a852e38662ae7b5620921249ed 206 SUPERFAMILY SSF46785 7 80 2.36E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01860 64ad2e3e8ad125ffe89d87c6a032a910 361 PANTHER PTHR38674:SF1 12 328 4.1E-40 T 23-04-2016 CYCME_RS01860 64ad2e3e8ad125ffe89d87c6a032a910 361 PANTHER PTHR38674 12 328 4.1E-40 T 23-04-2016 CYCME_RS01860 64ad2e3e8ad125ffe89d87c6a032a910 361 Pfam PF00487 Fatty acid desaturase 105 302 1.1E-22 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 SMART SM00487 23 220 4.1E-59 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 Pfam PF00271 Helicase conserved C-terminal domain 231 337 1.5E-29 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 SUPERFAMILY SSF52540 72 358 1.46E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 Gene3D G3DSA:3.40.50.300 210 363 3.2E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 SMART SM00490 256 337 9.9E-33 T 23-04-2016 IPR001650 Helicase, C-terminal CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 Gene3D G3DSA:3.40.50.300 5 209 1.5E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 Pfam PF03880 DbpA RNA binding domain 387 457 5.9E-25 T 23-04-2016 IPR005580 DbpA, RNA-binding domain CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 PANTHER PTHR24031 4 444 1.3E-235 T 23-04-2016 CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 PANTHER PTHR24031:SF180 4 444 1.3E-235 T 23-04-2016 CYCME_RS01420 dbaea2e84185af5680db727d5d5fd9d7 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.3E-48 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CYCME_RS08770 9c89dc068e5adc42c6d2ddca50a53026 442 Gene3D G3DSA:1.20.1600.10 49 432 2.6E-35 T 23-04-2016 CYCME_RS08770 9c89dc068e5adc42c6d2ddca50a53026 442 SUPERFAMILY SSF56954 25 433 2.49E-52 T 23-04-2016 CYCME_RS08770 9c89dc068e5adc42c6d2ddca50a53026 442 Pfam PF02321 Outer membrane efflux protein 53 221 1.9E-8 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS08770 9c89dc068e5adc42c6d2ddca50a53026 442 Pfam PF02321 Outer membrane efflux protein 304 432 8.5E-13 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 PANTHER PTHR10438:SF266 28 145 1.7E-36 T 23-04-2016 CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 SUPERFAMILY SSF52833 30 144 1.64E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 Gene3D G3DSA:3.40.30.10 34 143 2.4E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 141 1.8E-31 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 PRINTS PR00421 Thioredoxin family signature 60 68 1.6E-6 T 23-04-2016 CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 PRINTS PR00421 Thioredoxin family signature 68 77 1.6E-6 T 23-04-2016 CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 PRINTS PR00421 Thioredoxin family signature 108 119 1.6E-6 T 23-04-2016 CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 Pfam PF00085 Thioredoxin 43 141 3.1E-24 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CYCME_RS10035 a82684246a6bb6b1c4fceb646996c131 145 PANTHER PTHR10438 28 145 1.7E-36 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CYCME_RS09590 cbf061f8265bb98b51a4421685211797 209 SUPERFAMILY SSF53474 24 207 1.96E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS09590 cbf061f8265bb98b51a4421685211797 209 PANTHER PTHR35602:SF3 18 207 1.4E-53 T 23-04-2016 CYCME_RS09590 cbf061f8265bb98b51a4421685211797 209 PANTHER PTHR35602 18 207 1.4E-53 T 23-04-2016 CYCME_RS09590 cbf061f8265bb98b51a4421685211797 209 Pfam PF05728 Uncharacterised protein family (UPF0227) 24 207 1.1E-47 T 23-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CYCME_RS09590 cbf061f8265bb98b51a4421685211797 209 Gene3D G3DSA:3.40.50.1820 23 204 5.2E-11 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS03285 2037bb439ac6f2afd91dcf71355057a4 203 Pfam PF14497 Glutathione S-transferase, C-terminal domain 126 199 7.4E-11 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CYCME_RS03285 2037bb439ac6f2afd91dcf71355057a4 203 SUPERFAMILY SSF47616 83 200 1.39E-28 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS03285 2037bb439ac6f2afd91dcf71355057a4 203 SUPERFAMILY SSF52833 1 81 5.25E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS03285 2037bb439ac6f2afd91dcf71355057a4 203 Gene3D G3DSA:3.40.30.10 1 91 1.8E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS03285 2037bb439ac6f2afd91dcf71355057a4 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 76 3.5E-8 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CYCME_RS03285 2037bb439ac6f2afd91dcf71355057a4 203 Gene3D G3DSA:1.20.1050.10 92 190 1.7E-34 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CYCME_RS03285 2037bb439ac6f2afd91dcf71355057a4 203 PANTHER PTHR11260:SF154 1 197 3.2E-69 T 23-04-2016 CYCME_RS03285 2037bb439ac6f2afd91dcf71355057a4 203 PANTHER PTHR11260 1 197 3.2E-69 T 23-04-2016 CYCME_RS10470 f98c8e27a010db588e625ba083c851eb 305 Pfam PF01867 CRISPR associated protein Cas1 129 243 1.2E-10 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 CYCME_RS10470 f98c8e27a010db588e625ba083c851eb 305 Pfam PF01867 CRISPR associated protein Cas1 21 121 1.1E-5 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 CYCME_RS10470 f98c8e27a010db588e625ba083c851eb 305 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 16 302 11.598 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 CYCME_RS10470 f98c8e27a010db588e625ba083c851eb 305 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 16 125 4.6E-22 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 CYCME_RS10470 f98c8e27a010db588e625ba083c851eb 305 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 132 265 6.2E-31 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 CYCME_RS10470 f98c8e27a010db588e625ba083c851eb 305 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 7 272 3.9E-117 T 23-04-2016 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype CYCME_RS00360 2cc297608ef303b2431ae970705a69b3 127 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 1 108 7.7E-16 T 23-04-2016 IPR013362 Pilus modification type IV, PilV CYCME_RS12500 d86a0261528cdb819077ee5eaa1852a5 319 PANTHER PTHR34351:SF1 11 319 7.7E-42 T 23-04-2016 CYCME_RS12500 d86a0261528cdb819077ee5eaa1852a5 319 PANTHER PTHR34351 11 319 7.7E-42 T 23-04-2016 CYCME_RS12500 d86a0261528cdb819077ee5eaa1852a5 319 Pfam PF01882 Protein of unknown function DUF58 214 289 2.0E-9 T 23-04-2016 IPR002881 Domain of unknown function DUF58 CYCME_RS10935 92c6704710c5f7ccd973776d4b6342d1 354 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 1.1E-66 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 CYCME_RS10935 92c6704710c5f7ccd973776d4b6342d1 354 PANTHER PTHR33529 1 352 1.7E-82 T 23-04-2016 CYCME_RS10935 92c6704710c5f7ccd973776d4b6342d1 354 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 352 1.2E-109 T 23-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CYCME_RS10935 92c6704710c5f7ccd973776d4b6342d1 354 PANTHER PTHR33529:SF1 1 352 1.7E-82 T 23-04-2016 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 PANTHER PTHR28570 4 428 3.0E-172 T 23-04-2016 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 SUPERFAMILY SSF53187 5 89 1.0E-100 T 23-04-2016 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 SUPERFAMILY SSF53187 211 427 1.0E-100 T 23-04-2016 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 Gene3D G3DSA:2.30.250.10 89 217 6.9E-38 T 23-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 Gene3D G3DSA:3.40.630.10 220 427 3.4E-111 T 23-04-2016 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 Gene3D G3DSA:3.40.630.10 5 88 3.4E-111 T 23-04-2016 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 78 94 6.1E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 305 321 6.1E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 262 280 6.1E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 394 409 6.1E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 146 163 6.1E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 111 131 6.1E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 SUPERFAMILY SSF101821 90 210 1.1E-25 T 23-04-2016 CYCME_RS01270 7b3bcadde0d8acc9d2dbb63b4b94e0fb 428 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 14 427 1.4E-134 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CYCME_RS06485 32c081f8ee57b74d612aeeeab3ba126b 216 Pfam PF13795 HupE / UreJ protein 28 179 3.6E-50 T 23-04-2016 IPR032809 Putative HupE/UreJ protein CYCME_RS02330 8c7f79e8987e3f67d260fbfdaef26c2e 100 SUPERFAMILY SSF102829 6 92 1.31E-17 T 23-04-2016 IPR007838 Cell division protein ZapA-like CYCME_RS02330 8c7f79e8987e3f67d260fbfdaef26c2e 100 PANTHER PTHR34981:SF1 3 95 3.9E-15 T 23-04-2016 CYCME_RS02330 8c7f79e8987e3f67d260fbfdaef26c2e 100 Pfam PF05164 Cell division protein ZapA 7 90 4.6E-18 T 23-04-2016 IPR007838 Cell division protein ZapA-like CYCME_RS02330 8c7f79e8987e3f67d260fbfdaef26c2e 100 PANTHER PTHR34981 3 95 3.9E-15 T 23-04-2016 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 PANTHER PTHR21266:SF30 4 343 8.6E-93 T 23-04-2016 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 Gene3D G3DSA:3.90.380.10 153 438 3.5E-72 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 SUPERFAMILY SSF50022 11 163 1.96E-44 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 Gene3D G3DSA:2.102.10.10 46 152 7.9E-21 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 197 388 1.1E-14 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 SUPERFAMILY SSF55961 164 437 3.3E-47 T 23-04-2016 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 Pfam PF00355 Rieske [2Fe-2S] domain 46 126 2.2E-19 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 7.5E-45 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 7.5E-45 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 7.5E-45 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 7.5E-45 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 7.5E-45 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 148 174 7.5E-45 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CYCME_RS07940 2aada24169a5ced51f9fffa2b04b96e5 440 PANTHER PTHR21266 4 343 8.6E-93 T 23-04-2016 CYCME_RS01825 a32f2264785051da987c7c25927cbc62 177 SUPERFAMILY SSF54427 11 177 2.54E-32 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS01825 a32f2264785051da987c7c25927cbc62 177 Gene3D G3DSA:3.10.450.50 8 177 7.9E-49 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS01825 a32f2264785051da987c7c25927cbc62 177 Pfam PF00866 Ring hydroxylating beta subunit 25 169 3.1E-35 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS01825 a32f2264785051da987c7c25927cbc62 177 PANTHER PTHR41534 8 177 4.0E-20 T 23-04-2016 CYCME_RS02690 6811da8aa9912989c8a8822c7219078b 559 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 253 529 9.4E-79 T 23-04-2016 IPR013358 Pilus biogenesis, MshL CYCME_RS02690 6811da8aa9912989c8a8822c7219078b 559 Pfam PF00263 Bacterial type II and III secretion system protein 355 529 2.0E-40 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 CYCME_RS02690 6811da8aa9912989c8a8822c7219078b 559 PANTHER PTHR30332 237 529 2.9E-49 T 23-04-2016 CYCME_RS02690 6811da8aa9912989c8a8822c7219078b 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 518 532 1.8E-15 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS02690 6811da8aa9912989c8a8822c7219078b 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 495 513 1.8E-15 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS02690 6811da8aa9912989c8a8822c7219078b 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 284 294 1.8E-15 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS02690 6811da8aa9912989c8a8822c7219078b 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 350 374 1.8E-15 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 PANTHER PTHR18895 1 295 6.9E-118 T 23-04-2016 CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 300 1.9E-71 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 SUPERFAMILY SSF53335 56 289 2.07E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 Gene3D G3DSA:1.10.8.10 21 101 3.5E-7 T 23-04-2016 CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 Gene3D G3DSA:3.40.50.150 103 269 1.5E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 PIRSF PIRSF037167 1 303 2.5E-114 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 PANTHER PTHR18895:SF66 1 295 6.9E-118 T 23-04-2016 CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 Pfam PF05175 Methyltransferase small domain 129 211 4.8E-18 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 CYCME_RS04600 f9bb20e03b285bb88ff7351397eedfe4 306 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 8 291 3.0E-110 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CYCME_RS09025 d12c8feb0e949206744dae60bcc0fc08 182 SUPERFAMILY SSF48452 77 175 5.87E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS09025 d12c8feb0e949206744dae60bcc0fc08 182 Pfam PF13432 Tetratricopeptide repeat 92 138 2.2E-4 T 23-04-2016 CYCME_RS09025 d12c8feb0e949206744dae60bcc0fc08 182 Gene3D G3DSA:1.25.40.10 82 174 4.1E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS07330 ec6b231e495d3e78afe9f46249373d25 174 SUPERFAMILY SSF110997 98 170 3.27E-16 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS07330 ec6b231e495d3e78afe9f46249373d25 174 PANTHER PTHR38687 25 174 2.3E-13 T 23-04-2016 CYCME_RS07330 ec6b231e495d3e78afe9f46249373d25 174 Gene3D G3DSA:3.30.70.1070 97 171 1.1E-19 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS07330 ec6b231e495d3e78afe9f46249373d25 174 PANTHER PTHR38687:SF1 25 174 2.3E-13 T 23-04-2016 CYCME_RS07330 ec6b231e495d3e78afe9f46249373d25 174 Pfam PF05036 Sporulation related domain 97 169 5.5E-17 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CYCME_RS06280 cdbec715341ef05c90e2c433d6611608 144 Pfam PF07885 Ion channel 57 132 1.1E-12 T 23-04-2016 IPR013099 Potassium channel domain CYCME_RS06280 cdbec715341ef05c90e2c433d6611608 144 SUPERFAMILY SSF81324 26 138 1.83E-17 T 23-04-2016 CYCME_RS06280 cdbec715341ef05c90e2c433d6611608 144 Gene3D G3DSA:1.10.287.70 40 139 1.0E-14 T 23-04-2016 CYCME_RS07905 d992f65d93e3b9ca8d28b047ce0f655a 372 SUPERFAMILY SSF110296 108 277 7.19E-10 T 23-04-2016 CYCME_RS07905 d992f65d93e3b9ca8d28b047ce0f655a 372 Gene3D G3DSA:2.130.10.10 108 309 7.2E-12 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CYCME_RS08490 a70efdb6daa4c00ce9d852decf7158aa 163 PANTHER PTHR30582 81 161 5.2E-19 T 23-04-2016 CYCME_RS08490 a70efdb6daa4c00ce9d852decf7158aa 163 PANTHER PTHR30582 3 60 5.2E-19 T 23-04-2016 CYCME_RS08490 a70efdb6daa4c00ce9d852decf7158aa 163 SUPERFAMILY SSF141523 89 161 1.96E-25 T 23-04-2016 CYCME_RS08490 a70efdb6daa4c00ce9d852decf7158aa 163 SUPERFAMILY SSF141523 4 61 1.96E-25 T 23-04-2016 CYCME_RS08490 a70efdb6daa4c00ce9d852decf7158aa 163 Pfam PF03734 L,D-transpeptidase catalytic domain 8 161 1.6E-18 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 CYCME_RS08490 a70efdb6daa4c00ce9d852decf7158aa 163 Gene3D G3DSA:2.40.440.10 4 161 6.2E-28 T 23-04-2016 CYCME_RS04745 19161753c6959ebce2dd2ee92558e872 68 Gene3D G3DSA:1.20.5.300 1 45 2.4E-15 T 23-04-2016 CYCME_RS04745 19161753c6959ebce2dd2ee92558e872 68 PANTHER PTHR36508 1 68 8.4E-15 T 23-04-2016 CYCME_RS04745 19161753c6959ebce2dd2ee92558e872 68 Hamap MF_00715 Protein SlyX [slyX]. 1 68 13.572 T 23-04-2016 IPR007236 SlyX CYCME_RS04745 19161753c6959ebce2dd2ee92558e872 68 Pfam PF04102 SlyX 1 68 1.0E-22 T 23-04-2016 IPR007236 SlyX CYCME_RS00035 7d7db683df7a21b93f89a9e715535572 524 PANTHER PTHR11795 1 521 3.5E-148 T 23-04-2016 CYCME_RS00035 7d7db683df7a21b93f89a9e715535572 524 PANTHER PTHR11795:SF349 1 521 3.5E-148 T 23-04-2016 CYCME_RS00035 7d7db683df7a21b93f89a9e715535572 524 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 234 521 3.4E-131 T 23-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CYCME_RS00035 7d7db683df7a21b93f89a9e715535572 524 Pfam PF02653 Branched-chain amino acid transport system / permease component 236 507 8.1E-50 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 200 215 3.8E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 200 3.8E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 SMART SM00100 26 143 3.0E-11 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 SMART SM00419 180 227 1.3E-8 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 Pfam PF00027 Cyclic nucleotide-binding domain 48 126 1.5E-13 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 PANTHER PTHR24567:SF28 16 231 2.1E-33 T 23-04-2016 CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 SUPERFAMILY SSF51206 19 148 2.23E-19 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 Gene3D G3DSA:1.10.10.10 156 234 5.9E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 Gene3D G3DSA:2.60.120.10 24 148 4.1E-18 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 PANTHER PTHR24567 16 231 2.1E-33 T 23-04-2016 CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 Pfam PF13545 Crp-like helix-turn-helix domain 160 234 6.8E-17 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS08925 b25ceb59177c5d3f4a4f8dd50641a60a 238 SUPERFAMILY SSF46785 156 235 7.45E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS00995 1b1c316f1c4196ebf118035fd05ce412 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 4.5E-34 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 CYCME_RS00995 1b1c316f1c4196ebf118035fd05ce412 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 82.72 T 23-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 CYCME_RS00995 1b1c316f1c4196ebf118035fd05ce412 162 PANTHER PTHR38596 2 162 2.6E-81 T 23-04-2016 CYCME_RS00995 1b1c316f1c4196ebf118035fd05ce412 162 PANTHER PTHR38596:SF1 2 162 2.6E-81 T 23-04-2016 CYCME_RS00995 1b1c316f1c4196ebf118035fd05ce412 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 2 161 6.7E-64 T 23-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 SUPERFAMILY SSF52402 7 212 5.29E-71 T 23-04-2016 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 3.8E-60 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 3.4E-147 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 53.939 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 Gene3D G3DSA:3.40.50.620 4 212 5.0E-61 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 Gene3D G3DSA:3.40.50.620 246 255 5.0E-61 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 PANTHER PTHR23293 2 160 1.4E-88 T 23-04-2016 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 PANTHER PTHR23293 247 304 1.4E-88 T 23-04-2016 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 PANTHER PTHR23293 180 213 1.4E-88 T 23-04-2016 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 PANTHER PTHR23293:SF6 2 160 1.4E-88 T 23-04-2016 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 PANTHER PTHR23293:SF6 247 304 1.4E-88 T 23-04-2016 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 PANTHER PTHR23293:SF6 180 213 1.4E-88 T 23-04-2016 CYCME_RS02135 ed382a63fec54a5efc78f4a29b8926a7 304 PIRSF PIRSF002936 2 304 1.1E-150 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 CYCME_RS03120 0dd30967c0c3825931d0da635a72b7ee 239 PANTHER PTHR23427:SF2 1 115 7.2E-13 T 23-04-2016 CYCME_RS03120 0dd30967c0c3825931d0da635a72b7ee 239 Pfam PF02104 SURF1 family 16 219 4.6E-29 T 23-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 CYCME_RS03120 0dd30967c0c3825931d0da635a72b7ee 239 PANTHER PTHR23427 1 115 7.2E-13 T 23-04-2016 CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.3E-103 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 SUPERFAMILY SSF52374 1 281 2.68E-106 T 23-04-2016 CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 Gene3D G3DSA:3.40.50.620 1 174 4.2E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 5.9E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 PANTHER PTHR21299 1 281 3.0E-128 T 23-04-2016 CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 Gene3D G3DSA:3.30.1300.10 180 281 6.9E-30 T 23-04-2016 CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.4E-103 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.75 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CYCME_RS10805 5a98ce48d3b8b0a0c7d505f195e6ab38 283 PANTHER PTHR21299:SF1 1 281 3.0E-128 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CYCME_RS03480 f9bfaf854bc5e0f676fe84fff91f5042 271 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 23 250 1.0E-50 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CYCME_RS03480 f9bfaf854bc5e0f676fe84fff91f5042 271 PANTHER PTHR34138:SF1 1 268 1.7E-55 T 23-04-2016 CYCME_RS03480 f9bfaf854bc5e0f676fe84fff91f5042 271 Pfam PF04085 rod shape-determining protein MreC 101 246 1.4E-32 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CYCME_RS03480 f9bfaf854bc5e0f676fe84fff91f5042 271 PIRSF PIRSF038471 1 262 3.3E-64 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CYCME_RS03480 f9bfaf854bc5e0f676fe84fff91f5042 271 PANTHER PTHR34138 1 268 1.7E-55 T 23-04-2016 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 9.9E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 9.9E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 9.9E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 PANTHER PTHR10992:SF860 212 311 1.7E-81 T 23-04-2016 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 Gene3D G3DSA:3.40.50.1820 7 307 3.7E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 PANTHER PTHR10992:SF860 2 174 1.7E-81 T 23-04-2016 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 Pfam PF00561 alpha/beta hydrolase fold 36 299 2.1E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 1.0E-98 T 23-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 PANTHER PTHR10992 2 174 1.7E-81 T 23-04-2016 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 PANTHER PTHR10992 212 311 1.7E-81 T 23-04-2016 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 PIRSF PIRSF006431 1 312 3.5E-114 T 23-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 CYCME_RS10655 ede631fb8f62ca60403724c45d704eb0 312 SUPERFAMILY SSF53474 2 309 1.16E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS08655 c6a295a4f34b54a92d39acecaae2b7bf 150 PANTHER PTHR33932:SF4 4 140 7.0E-29 T 23-04-2016 CYCME_RS08655 c6a295a4f34b54a92d39acecaae2b7bf 150 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 6 127 1.7E-27 T 23-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CYCME_RS08655 c6a295a4f34b54a92d39acecaae2b7bf 150 PANTHER PTHR33932 4 140 7.0E-29 T 23-04-2016 CYCME_RS03015 d3458251a39c166a1e37a2c7b0d10587 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 192 1.1E-61 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CYCME_RS03015 d3458251a39c166a1e37a2c7b0d10587 203 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 3 197 49.371 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CYCME_RS03015 d3458251a39c166a1e37a2c7b0d10587 203 PANTHER PTHR11067:SF9 1 203 4.8E-77 T 23-04-2016 CYCME_RS03015 d3458251a39c166a1e37a2c7b0d10587 203 Gene3D G3DSA:3.90.950.10 3 197 2.7E-78 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CYCME_RS03015 d3458251a39c166a1e37a2c7b0d10587 203 SUPERFAMILY SSF52972 2 196 3.4E-73 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CYCME_RS03015 d3458251a39c166a1e37a2c7b0d10587 203 PANTHER PTHR11067 1 203 4.8E-77 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CYCME_RS03015 d3458251a39c166a1e37a2c7b0d10587 203 Pfam PF01725 Ham1 family 5 192 4.4E-55 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 Gene3D G3DSA:3.40.50.720 12 253 2.0E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 PANTHER PTHR24317 1 287 2.7E-137 T 23-04-2016 CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 SUPERFAMILY SSF51735 14 254 2.8E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 3.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.1E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 9.3E-50 T 23-04-2016 CYCME_RS05995 242b9c36079c40ce86eae7fa1bed704e 287 PANTHER PTHR24317:SF5 1 287 2.7E-137 T 23-04-2016 CYCME_RS01515 cb3f43dca9713db9141d8b275a00c5c1 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.557 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CYCME_RS01515 cb3f43dca9713db9141d8b275a00c5c1 244 PANTHER PTHR21235:SF15 1 235 5.7E-97 T 23-04-2016 CYCME_RS01515 cb3f43dca9713db9141d8b275a00c5c1 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 234 3.9E-77 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CYCME_RS01515 cb3f43dca9713db9141d8b275a00c5c1 244 Pfam PF00977 Histidine biosynthesis protein 3 231 4.6E-77 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 CYCME_RS01515 cb3f43dca9713db9141d8b275a00c5c1 244 SUPERFAMILY SSF51366 1 235 9.42E-72 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CYCME_RS01515 cb3f43dca9713db9141d8b275a00c5c1 244 PANTHER PTHR21235 1 235 5.7E-97 T 23-04-2016 CYCME_RS01515 cb3f43dca9713db9141d8b275a00c5c1 244 Gene3D G3DSA:3.20.20.70 1 238 2.5E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS04735 9d0a7fc871f602055c5dfe99e70b7255 480 PANTHER PTHR10283 5 480 9.3E-160 T 23-04-2016 CYCME_RS04735 9d0a7fc871f602055c5dfe99e70b7255 480 Pfam PF03600 Citrate transporter 50 425 2.1E-66 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 CYCME_RS04735 9d0a7fc871f602055c5dfe99e70b7255 480 PANTHER PTHR10283:SF91 5 480 9.3E-160 T 23-04-2016 CYCME_RS06605 1562e3a2dff1eb23fd09b0ba22c1ea6f 101 Gene3D G3DSA:3.30.70.100 26 92 5.9E-16 T 23-04-2016 CYCME_RS06605 1562e3a2dff1eb23fd09b0ba22c1ea6f 101 SUPERFAMILY SSF55008 22 92 3.53E-14 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS06605 1562e3a2dff1eb23fd09b0ba22c1ea6f 101 Pfam PF00403 Heavy-metal-associated domain 31 89 4.4E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CYCME_RS06605 1562e3a2dff1eb23fd09b0ba22c1ea6f 101 PRINTS PR00944 Copper ion binding protein signature 52 65 1.2E-7 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CYCME_RS06605 1562e3a2dff1eb23fd09b0ba22c1ea6f 101 PRINTS PR00944 Copper ion binding protein signature 39 52 1.2E-7 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CYCME_RS06605 1562e3a2dff1eb23fd09b0ba22c1ea6f 101 PRINTS PR00944 Copper ion binding protein signature 78 91 1.2E-7 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CYCME_RS06605 1562e3a2dff1eb23fd09b0ba22c1ea6f 101 PRINTS PR00944 Copper ion binding protein signature 27 39 1.2E-7 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 216 8.1E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 SUPERFAMILY SSF88659 155 217 1.16E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 Gene3D G3DSA:1.10.10.10 159 218 3.1E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 PANTHER PTHR30173 46 221 6.7E-32 T 23-04-2016 CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 Pfam PF04542 Sigma-70 region 2 63 129 1.6E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 SUPERFAMILY SSF88946 50 142 3.57E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 PANTHER PTHR30173:SF31 46 221 6.7E-32 T 23-04-2016 CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 Gene3D G3DSA:1.10.1740.10 53 142 3.6E-18 T 23-04-2016 CYCME_RS09455 0c740628b693c04cdba73d9565a5be69 221 Pfam PF04545 Sigma-70, region 4 166 214 8.6E-9 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CYCME_RS06515 d50dce7e76e77d49fb73e04633fc0e4b 330 PANTHER PTHR34978 49 315 5.9E-14 T 23-04-2016 CYCME_RS06515 d50dce7e76e77d49fb73e04633fc0e4b 330 Pfam PF05569 BlaR1 peptidase M56 89 287 4.8E-10 T 23-04-2016 IPR008756 Peptidase M56 CYCME_RS06515 d50dce7e76e77d49fb73e04633fc0e4b 330 Gene3D G3DSA:3.30.2010.10 154 207 9.8E-5 T 23-04-2016 CYCME_RS01875 54f3a116aa169fc82806eb24171c7bcf 258 Pfam PF17131 Outer membrane lipoprotein-sorting protein 73 256 1.1E-61 T 23-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein CYCME_RS01875 54f3a116aa169fc82806eb24171c7bcf 258 Gene3D G3DSA:2.50.20.10 22 256 2.5E-74 T 23-04-2016 CYCME_RS10970 89f088881cd86499c2100aac951d0ba3 357 PANTHER PTHR12526 1 353 2.8E-50 T 23-04-2016 CYCME_RS10970 89f088881cd86499c2100aac951d0ba3 357 Gene3D G3DSA:3.40.50.2000 137 313 4.4E-27 T 23-04-2016 CYCME_RS10970 89f088881cd86499c2100aac951d0ba3 357 SUPERFAMILY SSF53756 5 348 6.67E-66 T 23-04-2016 CYCME_RS10970 89f088881cd86499c2100aac951d0ba3 357 Pfam PF13439 Glycosyltransferase Family 4 52 149 6.3E-13 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CYCME_RS10970 89f088881cd86499c2100aac951d0ba3 357 Pfam PF00534 Glycosyl transferases group 1 170 312 3.1E-29 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CYCME_RS01765 3abb6db47f88f91917b4e00d358e62bc 234 Pfam PF04340 Protein of unknown function, DUF484 8 227 1.5E-50 T 23-04-2016 IPR007435 Protein of unknown function DUF484 CYCME_RS01765 3abb6db47f88f91917b4e00d358e62bc 234 PANTHER PTHR38765 1 234 3.8E-41 T 23-04-2016 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 SMART SM00052 743 989 5.1E-112 T 23-04-2016 IPR001633 EAL domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 SMART SM00091 442 509 0.0015 T 23-04-2016 IPR000014 PAS domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 SUPERFAMILY SSF141868 749 995 8.11E-89 T 23-04-2016 IPR001633 EAL domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 Gene3D G3DSA:3.30.70.270 574 737 8.6E-54 T 23-04-2016 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 439 568 5.1E-15 T 23-04-2016 IPR000014 PAS domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 Pfam PF00990 Diguanylate cyclase, GGDEF domain 573 728 6.3E-44 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 Pfam PF00909 Ammonium Transporter Family 1 376 1.4E-108 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 568 730 2.1E-43 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 ProSitePatterns PS01219 Ammonium transporters signature. 138 163 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 TIGRFAM TIGR00836 amt: ammonium transporter 1 377 4.5E-112 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 SUPERFAMILY SSF55785 427 541 6.81E-14 T 23-04-2016 IPR000014 PAS domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 SUPERFAMILY SSF111352 1 361 5.62E-98 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 PANTHER PTHR11730 1 423 6.1E-155 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 SMART SM00267 561 733 1.2E-60 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 Gene3D G3DSA:3.20.20.450 746 996 2.6E-95 T 23-04-2016 IPR001633 EAL domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 Pfam PF00563 EAL domain 749 984 2.1E-72 T 23-04-2016 IPR001633 EAL domain CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 SUPERFAMILY SSF55073 577 735 1.1E-46 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 Gene3D G3DSA:1.10.3430.10 1 376 5.4E-106 T 23-04-2016 IPR029020 Ammonium/urea transporter CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 PANTHER PTHR11730:SF18 1 423 6.1E-155 T 23-04-2016 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 Gene3D G3DSA:3.30.450.20 438 542 2.6E-14 T 23-04-2016 CYCME_RS05775 7b5e2885f9c6250f6ca4b46e482eec11 997 Pfam PF13426 PAS domain 453 541 4.0E-10 T 23-04-2016 IPR000014 PAS domain CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 Pfam PF00919 Uncharacterized protein family UPF0004 2 94 6.4E-22 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 SMART SM00729 135 350 2.7E-43 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 Gene3D G3DSA:3.80.30.20 135 360 4.1E-64 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 421 2.6E-116 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 Pfam PF04055 Radical SAM superfamily 140 308 1.4E-21 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 SUPERFAMILY SSF102114 130 355 3.01E-52 T 23-04-2016 CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 139 159 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 PANTHER PTHR11918 1 427 2.4E-114 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 5 407 1.5E-124 T 23-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 CYCME_RS05445 f64a8aefc7e12422462f2c9d20c210a7 428 PANTHER PTHR11918:SF45 1 427 2.4E-114 T 23-04-2016 CYCME_RS11970 eeb73dda64039ced2236c1bbae9abefa 468 Pfam PF00580 UvrD/REP helicase N-terminal domain 109 165 5.2E-10 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CYCME_RS11970 eeb73dda64039ced2236c1bbae9abefa 468 Gene3D G3DSA:3.40.50.300 9 182 1.1E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11970 eeb73dda64039ced2236c1bbae9abefa 468 Gene3D G3DSA:3.40.50.300 401 463 4.4E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11970 eeb73dda64039ced2236c1bbae9abefa 468 SUPERFAMILY SSF52540 11 288 1.68E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11970 eeb73dda64039ced2236c1bbae9abefa 468 SUPERFAMILY SSF52540 369 461 1.68E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08645 26cc9f257005189c8a4d5ddb86514d3d 495 PANTHER PTHR22773:SF49 1 490 1.1E-135 T 23-04-2016 CYCME_RS08645 26cc9f257005189c8a4d5ddb86514d3d 495 PANTHER PTHR22773 1 490 1.1E-135 T 23-04-2016 CYCME_RS08645 26cc9f257005189c8a4d5ddb86514d3d 495 Pfam PF00361 Proton-conducting membrane transporter 131 422 4.4E-67 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CYCME_RS08645 26cc9f257005189c8a4d5ddb86514d3d 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 1.8E-9 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CYCME_RS08645 26cc9f257005189c8a4d5ddb86514d3d 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 328 347 1.8E-9 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CYCME_RS08645 26cc9f257005189c8a4d5ddb86514d3d 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 1.8E-9 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CYCME_RS08645 26cc9f257005189c8a4d5ddb86514d3d 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 1.8E-9 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CYCME_RS10485 03cacc646f0b7ae6544735ece0f768e1 365 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 4 325 2.6E-102 T 23-04-2016 IPR010148 CRISPR-associated protein, CT1975 CYCME_RS10485 03cacc646f0b7ae6544735ece0f768e1 365 Pfam PF09344 CT1975-like protein 6 337 1.8E-100 T 23-04-2016 IPR010148 CRISPR-associated protein, CT1975 CYCME_RS00465 27655c5b85eed34528773899bac9d4b4 278 PANTHER PTHR30269:SF18 12 277 1.2E-66 T 23-04-2016 CYCME_RS00465 27655c5b85eed34528773899bac9d4b4 278 Pfam PF01925 Sulfite exporter TauE/SafE 21 272 7.9E-52 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CYCME_RS00465 27655c5b85eed34528773899bac9d4b4 278 PANTHER PTHR30269 12 277 1.2E-66 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CYCME_RS10620 9cf01b4f9b520a19c0b1520bc13877bf 831 Pfam PF03783 Curli production assembly/transport component CsgG 664 777 9.8E-6 T 23-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 CYCME_RS10620 9cf01b4f9b520a19c0b1520bc13877bf 831 Pfam PF03783 Curli production assembly/transport component CsgG 379 502 1.4E-14 T 23-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 CYCME_RS10620 9cf01b4f9b520a19c0b1520bc13877bf 831 Pfam PF03783 Curli production assembly/transport component CsgG 32 99 1.1E-5 T 23-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 CYCME_RS06680 a42977a3728ebe381c9c998b4814ba7c 153 SUPERFAMILY SSF46785 10 147 1.57E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS06680 a42977a3728ebe381c9c998b4814ba7c 153 Pfam PF01475 Ferric uptake regulator family 18 141 1.8E-14 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CYCME_RS06680 a42977a3728ebe381c9c998b4814ba7c 153 PANTHER PTHR33202:SF6 1 150 6.1E-27 T 23-04-2016 CYCME_RS06680 a42977a3728ebe381c9c998b4814ba7c 153 Gene3D G3DSA:1.10.10.10 9 82 7.7E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS06680 a42977a3728ebe381c9c998b4814ba7c 153 PANTHER PTHR33202 1 150 6.1E-27 T 23-04-2016 CYCME_RS08710 8972fb230f41297726f39407839ecfc0 179 SUPERFAMILY SSF56770 4 179 5.1E-39 T 23-04-2016 CYCME_RS08710 8972fb230f41297726f39407839ecfc0 179 PANTHER PTHR11995:SF6 134 176 1.3E-36 T 23-04-2016 CYCME_RS08710 8972fb230f41297726f39407839ecfc0 179 PANTHER PTHR11995:SF6 1 101 1.3E-36 T 23-04-2016 CYCME_RS08710 8972fb230f41297726f39407839ecfc0 179 Gene3D G3DSA:3.40.50.700 3 172 9.1E-27 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CYCME_RS08710 8972fb230f41297726f39407839ecfc0 179 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 15 162 3.4E-29 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CYCME_RS08710 8972fb230f41297726f39407839ecfc0 179 PANTHER PTHR11995 134 176 1.3E-36 T 23-04-2016 CYCME_RS08710 8972fb230f41297726f39407839ecfc0 179 PANTHER PTHR11995 1 101 1.3E-36 T 23-04-2016 CYCME_RS05885 9713200df1c19b56e26621c622abdfda 137 Gene3D G3DSA:3.10.129.10 7 134 1.5E-43 T 23-04-2016 IPR029069 HotDog domain CYCME_RS05885 9713200df1c19b56e26621c622abdfda 137 SUPERFAMILY SSF54637 4 135 1.51E-39 T 23-04-2016 IPR029069 HotDog domain CYCME_RS05885 9713200df1c19b56e26621c622abdfda 137 Pfam PF01575 MaoC like domain 16 115 5.0E-27 T 23-04-2016 IPR002539 MaoC-like domain CYCME_RS05885 9713200df1c19b56e26621c622abdfda 137 PANTHER PTHR13078 8 118 3.6E-41 T 23-04-2016 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 Gene3D G3DSA:3.30.420.40 204 386 1.2E-66 T 23-04-2016 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 SUPERFAMILY SSF53067 156 387 5.01E-75 T 23-04-2016 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PRINTS PR00471 Acetate kinase family signature 201 222 4.2E-34 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PRINTS PR00471 Acetate kinase family signature 369 381 4.2E-34 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PRINTS PR00471 Acetate kinase family signature 5 16 4.2E-34 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PRINTS PR00471 Acetate kinase family signature 172 185 4.2E-34 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PRINTS PR00471 Acetate kinase family signature 317 333 4.2E-34 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PRINTS PR00471 Acetate kinase family signature 295 308 4.2E-34 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 Gene3D G3DSA:3.30.420.40 123 203 2.2E-4 T 23-04-2016 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 TIGRFAM TIGR00016 ackA: acetate kinase 3 384 7.2E-104 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PIRSF PIRSF000722 1 391 4.1E-134 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PANTHER PTHR21060 1 397 1.6E-142 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 Pfam PF00871 Acetokinase family 5 382 1.2E-101 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 SUPERFAMILY SSF53067 4 194 8.81E-56 T 23-04-2016 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 Hamap MF_00020 Acetate kinase [ackA]. 1 392 150.518 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CYCME_RS06330 2e0cf858d743f316002ae81c35d97581 403 PANTHER PTHR21060:SF11 1 397 1.6E-142 T 23-04-2016 CYCME_RS12360 ffab0d88e21ad25ebc4c14e9f2ae9021 104 Pfam PF00355 Rieske [2Fe-2S] domain 4 90 1.6E-15 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12360 ffab0d88e21ad25ebc4c14e9f2ae9021 104 SUPERFAMILY SSF50022 2 100 1.19E-27 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12360 ffab0d88e21ad25ebc4c14e9f2ae9021 104 Gene3D G3DSA:2.102.10.10 2 100 3.9E-27 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS12360 ffab0d88e21ad25ebc4c14e9f2ae9021 104 PANTHER PTHR21496 1 98 3.6E-16 T 23-04-2016 CYCME_RS10170 e2683b53009dc7a9721d985c52417c9e 319 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 314 3.4E-66 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS10170 e2683b53009dc7a9721d985c52417c9e 319 PANTHER PTHR21708 1 317 2.8E-55 T 23-04-2016 CYCME_RS10170 e2683b53009dc7a9721d985c52417c9e 319 SUPERFAMILY SSF51735 4 194 1.77E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10170 e2683b53009dc7a9721d985c52417c9e 319 Gene3D G3DSA:1.10.1040.10 202 315 4.8E-28 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CYCME_RS10170 e2683b53009dc7a9721d985c52417c9e 319 SUPERFAMILY SSF48179 193 314 7.82E-24 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS10170 e2683b53009dc7a9721d985c52417c9e 319 Gene3D G3DSA:3.40.50.720 2 201 1.3E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10170 e2683b53009dc7a9721d985c52417c9e 319 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 193 314 8.0E-26 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS10170 e2683b53009dc7a9721d985c52417c9e 319 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 161 1.1E-28 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS04180 3b049144f9d630cad2b243c955db9163 176 SMART SM00900 88 169 1.1E-11 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CYCME_RS04180 3b049144f9d630cad2b243c955db9163 176 Pfam PF04205 FMN-binding domain 88 165 6.2E-12 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CYCME_RS02390 da30f30daf589d0ab314bafae01d8685 315 Pfam PF00294 pfkB family carbohydrate kinase 44 296 2.4E-38 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CYCME_RS02390 da30f30daf589d0ab314bafae01d8685 315 SUPERFAMILY SSF53613 7 302 5.14E-61 T 23-04-2016 IPR029056 Ribokinase-like CYCME_RS02390 da30f30daf589d0ab314bafae01d8685 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 52 76 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CYCME_RS02390 da30f30daf589d0ab314bafae01d8685 315 PANTHER PTHR10584 9 311 2.5E-97 T 23-04-2016 CYCME_RS02390 da30f30daf589d0ab314bafae01d8685 315 PANTHER PTHR10584:SF15 9 311 2.5E-97 T 23-04-2016 CYCME_RS02390 da30f30daf589d0ab314bafae01d8685 315 Gene3D G3DSA:3.40.1190.20 8 305 1.4E-51 T 23-04-2016 IPR029056 Ribokinase-like CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 Gene3D G3DSA:3.30.2010.10 72 152 4.0E-16 T 23-04-2016 CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 PANTHER PTHR22726:SF10 1 357 2.3E-80 T 23-04-2016 CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 Pfam PF01435 Peptidase family M48 78 259 1.6E-27 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 489 28.468 T 23-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 SUPERFAMILY SSF48452 318 468 4.43E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 PANTHER PTHR22726 1 357 2.3E-80 T 23-04-2016 CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 Gene3D G3DSA:1.25.40.10 317 467 6.8E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 SMART SM00028 434 467 14.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS10925 567d01a942e5f5f502193a3b9fed3346 491 SMART SM00028 315 348 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CYCME_RS00055 f158113eb3ca9708dd51e12467b0734b 282 PANTHER PTHR33643 17 279 1.6E-30 T 23-04-2016 CYCME_RS00055 f158113eb3ca9708dd51e12467b0734b 282 Hamap MF_01384 Urease accessory protein UreD [ureD]. 17 266 27.99 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CYCME_RS00055 f158113eb3ca9708dd51e12467b0734b 282 Pfam PF01774 UreD urease accessory protein 58 255 8.6E-44 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CYCME_RS00055 f158113eb3ca9708dd51e12467b0734b 282 PANTHER PTHR33643:SF1 17 279 1.6E-30 T 23-04-2016 CYCME_RS06070 5213dff2aa36d24227357d6fabaf98f8 259 PANTHER PTHR11739 27 236 1.7E-21 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS06070 5213dff2aa36d24227357d6fabaf98f8 259 Gene3D G3DSA:1.10.580.10 41 112 5.5E-6 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 CYCME_RS06070 5213dff2aa36d24227357d6fabaf98f8 259 PANTHER PTHR11739:SF4 27 236 1.7E-21 T 23-04-2016 CYCME_RS06070 5213dff2aa36d24227357d6fabaf98f8 259 Pfam PF00285 Citrate synthase, C-terminal domain 40 234 5.6E-24 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS06070 5213dff2aa36d24227357d6fabaf98f8 259 Gene3D G3DSA:1.10.230.10 113 205 9.5E-12 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain CYCME_RS06070 5213dff2aa36d24227357d6fabaf98f8 259 SUPERFAMILY SSF48256 4 239 1.02E-42 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CYCME_RS00040 e1b1d4af12dabbf5caaaa555ca4b4121 363 PANTHER PTHR30482:SF4 119 361 2.4E-153 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC CYCME_RS00040 e1b1d4af12dabbf5caaaa555ca4b4121 363 PANTHER PTHR30482:SF4 1 91 2.4E-153 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC CYCME_RS00040 e1b1d4af12dabbf5caaaa555ca4b4121 363 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 40 354 1.0E-132 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC CYCME_RS00040 e1b1d4af12dabbf5caaaa555ca4b4121 363 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 343 1.4E-41 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CYCME_RS00040 e1b1d4af12dabbf5caaaa555ca4b4121 363 PANTHER PTHR30482 119 361 2.4E-153 T 23-04-2016 CYCME_RS00040 e1b1d4af12dabbf5caaaa555ca4b4121 363 PANTHER PTHR30482 1 91 2.4E-153 T 23-04-2016 CYCME_RS02775 8ad3b784abbd4c77729625e76065ef1a 182 PANTHER PTHR10286 6 175 3.7E-73 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CYCME_RS02775 8ad3b784abbd4c77729625e76065ef1a 182 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.343 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CYCME_RS02775 8ad3b784abbd4c77729625e76065ef1a 182 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CYCME_RS02775 8ad3b784abbd4c77729625e76065ef1a 182 SUPERFAMILY SSF50324 6 174 1.09E-68 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CYCME_RS02775 8ad3b784abbd4c77729625e76065ef1a 182 Gene3D G3DSA:3.90.80.10 6 174 7.3E-62 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CYCME_RS02775 8ad3b784abbd4c77729625e76065ef1a 182 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.4E-54 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CYCME_RS00085 1ae81dcbe14697fe41b7254e23a3d481 187 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 187 18.543 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CYCME_RS00085 1ae81dcbe14697fe41b7254e23a3d481 187 PANTHER PTHR33620 3 187 3.4E-16 T 23-04-2016 CYCME_RS00085 1ae81dcbe14697fe41b7254e23a3d481 187 PIRSF PIRSF009467 1 187 2.1E-42 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CYCME_RS00085 1ae81dcbe14697fe41b7254e23a3d481 187 Pfam PF01730 UreF 1 145 3.3E-36 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CYCME_RS01145 4d5d27d76de1141e83da37e261921d81 164 Gene3D G3DSA:3.10.450.50 5 163 1.1E-40 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS01145 4d5d27d76de1141e83da37e261921d81 164 Pfam PF00866 Ring hydroxylating beta subunit 19 152 2.1E-24 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS01145 4d5d27d76de1141e83da37e261921d81 164 PANTHER PTHR41534:SF1 2 152 8.2E-20 T 23-04-2016 CYCME_RS01145 4d5d27d76de1141e83da37e261921d81 164 PANTHER PTHR41534 2 152 8.2E-20 T 23-04-2016 CYCME_RS01145 4d5d27d76de1141e83da37e261921d81 164 SUPERFAMILY SSF54427 8 164 9.06E-34 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 PANTHER PTHR23416 1 237 1.4E-99 T 23-04-2016 CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 Gene3D G3DSA:2.160.10.10 60 227 2.6E-35 T 23-04-2016 CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 PIRSF PIRSF000441 1 237 6.6E-87 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 SUPERFAMILY SSF51161 3 168 1.66E-53 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 Gene3D G3DSA:1.10.3130.10 1 59 1.2E-25 T 23-04-2016 CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 3.3E-76 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 PANTHER PTHR23416:SF55 1 237 1.4E-99 T 23-04-2016 CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 6.5E-8 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 1.9E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS05715 b6aebfbf22b7ce08677acc2642665ce8 262 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 1.1E-4 T 23-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CYCME_RS12000 8bca73b1a7a970778d19912c47c8f5c0 430 PANTHER PTHR30408:SF6 98 237 1.5E-42 T 23-04-2016 CYCME_RS12000 8bca73b1a7a970778d19912c47c8f5c0 430 SUPERFAMILY SSF116734 210 429 2.29E-39 T 23-04-2016 CYCME_RS12000 8bca73b1a7a970778d19912c47c8f5c0 430 PANTHER PTHR30408 98 237 1.5E-42 T 23-04-2016 CYCME_RS12000 8bca73b1a7a970778d19912c47c8f5c0 430 SUPERFAMILY SSF116734 4 211 2.62E-32 T 23-04-2016 CYCME_RS12000 8bca73b1a7a970778d19912c47c8f5c0 430 Pfam PF01420 Type I restriction modification DNA specificity domain 226 407 2.6E-8 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CYCME_RS10535 70f9d8a85545f5dab13f5851f740a25f 177 Pfam PF00691 OmpA family 73 164 7.5E-17 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS10535 70f9d8a85545f5dab13f5851f740a25f 177 PANTHER PTHR30128 1 174 1.8E-40 T 23-04-2016 CYCME_RS10535 70f9d8a85545f5dab13f5851f740a25f 177 PRINTS PR01021 OMPA domain signature 119 135 7.2E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS10535 70f9d8a85545f5dab13f5851f740a25f 177 PRINTS PR01021 OMPA domain signature 104 119 7.2E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS10535 70f9d8a85545f5dab13f5851f740a25f 177 PRINTS PR01021 OMPA domain signature 74 96 7.2E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CYCME_RS10535 70f9d8a85545f5dab13f5851f740a25f 177 SUPERFAMILY SSF103088 68 173 7.46E-30 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS10535 70f9d8a85545f5dab13f5851f740a25f 177 PANTHER PTHR30128:SF18 1 174 1.8E-40 T 23-04-2016 CYCME_RS10535 70f9d8a85545f5dab13f5851f740a25f 177 Gene3D G3DSA:3.30.1330.60 69 173 2.2E-30 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS07505 8bae03cdd6bac2bd6670234f6304bdae 482 SUPERFAMILY SSF101960 36 81 2.22E-141 T 23-04-2016 CYCME_RS07505 8bae03cdd6bac2bd6670234f6304bdae 482 SUPERFAMILY SSF101960 108 479 2.22E-141 T 23-04-2016 CYCME_RS07505 8bae03cdd6bac2bd6670234f6304bdae 482 PANTHER PTHR30508 1 482 0.0 T 23-04-2016 CYCME_RS07505 8bae03cdd6bac2bd6670234f6304bdae 482 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 16 473 8.0E-196 T 23-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CYCME_RS07505 8bae03cdd6bac2bd6670234f6304bdae 482 Pfam PF01458 Uncharacterized protein family (UPF0051) 220 453 2.9E-71 T 23-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CYCME_RS07505 8bae03cdd6bac2bd6670234f6304bdae 482 PANTHER PTHR30508:SF1 1 482 0.0 T 23-04-2016 CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 SUPERFAMILY SSF52833 4 182 1.2E-54 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 PIRSF PIRSF000303 1 183 3.7E-61 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 23-04-2016 IPR029759 Glutathione peroxidase active site CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 Pfam PF00255 Glutathione peroxidase 5 111 4.5E-39 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.6E-19 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.6E-19 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.6E-19 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 PANTHER PTHR11592 1 183 1.3E-79 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 Gene3D G3DSA:3.40.30.10 4 182 1.2E-63 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS04235 21076e30e19be419ec3a5d3deff40f6f 183 PANTHER PTHR11592:SF40 1 183 1.3E-79 T 23-04-2016 CYCME_RS03195 762bd15e8e88add52b1dd9383c7ee068 137 Pfam PF00571 CBS domain 77 123 4.2E-5 T 23-04-2016 IPR000644 CBS domain CYCME_RS03195 762bd15e8e88add52b1dd9383c7ee068 137 Pfam PF00571 CBS domain 9 50 1.4E-4 T 23-04-2016 IPR000644 CBS domain CYCME_RS03195 762bd15e8e88add52b1dd9383c7ee068 137 Gene3D G3DSA:3.10.580.10 8 125 2.3E-20 T 23-04-2016 CYCME_RS03195 762bd15e8e88add52b1dd9383c7ee068 137 SUPERFAMILY SSF54631 6 125 3.54E-21 T 23-04-2016 CYCME_RS04115 a32324a03f85f90ed1417a2b6b35e46c 437 Pfam PF13520 Amino acid permease 18 410 7.4E-39 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CYCME_RS04115 a32324a03f85f90ed1417a2b6b35e46c 437 PIRSF PIRSF006060 4 436 3.0E-55 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CYCME_RS04115 a32324a03f85f90ed1417a2b6b35e46c 437 PANTHER PTHR11785 14 437 2.7E-64 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CYCME_RS12080 d948cc81f0eeb65e6a2e8e55e3092233 222 SMART SM00986 66 213 8.0E-20 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS12080 d948cc81f0eeb65e6a2e8e55e3092233 222 SMART SM00987 66 213 8.0E-20 T 23-04-2016 CYCME_RS12080 d948cc81f0eeb65e6a2e8e55e3092233 222 SUPERFAMILY SSF52141 40 219 1.57E-39 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS12080 d948cc81f0eeb65e6a2e8e55e3092233 222 PANTHER PTHR33693:SF1 39 221 6.8E-39 T 23-04-2016 CYCME_RS12080 d948cc81f0eeb65e6a2e8e55e3092233 222 PANTHER PTHR33693 39 221 6.8E-39 T 23-04-2016 CYCME_RS12080 d948cc81f0eeb65e6a2e8e55e3092233 222 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 52 215 1.5E-37 T 23-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain CYCME_RS12080 d948cc81f0eeb65e6a2e8e55e3092233 222 Gene3D G3DSA:3.40.470.10 41 220 5.7E-45 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS12080 d948cc81f0eeb65e6a2e8e55e3092233 222 Pfam PF03167 Uracil DNA glycosylase superfamily 67 213 2.6E-28 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CYCME_RS07680 54ef084b02d87f2bbe46e921be10a89e 251 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 205 231 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 CYCME_RS07680 54ef084b02d87f2bbe46e921be10a89e 251 PANTHER PTHR13773 1 239 1.5E-47 T 23-04-2016 CYCME_RS07680 54ef084b02d87f2bbe46e921be10a89e 251 PANTHER PTHR13773:SF0 1 239 1.5E-47 T 23-04-2016 CYCME_RS07680 54ef084b02d87f2bbe46e921be10a89e 251 Pfam PF01148 Cytidylyltransferase family 7 244 1.0E-54 T 23-04-2016 CYCME_RS00025 e7d7e7c6d8e2e03d57cb5f66322ee710 386 Gene3D G3DSA:2.40.160.10 27 385 2.5E-11 T 23-04-2016 IPR023614 Porin domain CYCME_RS00025 e7d7e7c6d8e2e03d57cb5f66322ee710 386 SUPERFAMILY SSF56935 66 385 1.98E-7 T 23-04-2016 CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 110 273 3.8E-57 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 PIRSF PIRSF006250 4 277 3.1E-93 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 Gene3D G3DSA:3.20.20.70 130 263 1.4E-58 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 PANTHER PTHR32179 1 277 4.0E-118 T 23-04-2016 CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 107 3.4E-25 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 SUPERFAMILY SSF54675 5 107 2.75E-29 T 23-04-2016 CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 11 273 1.5E-90 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 Gene3D G3DSA:3.90.1170.20 2 129 6.0E-46 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CYCME_RS09880 53d3ccf1e0da8b205bb4d5bdc6a5623b 278 SUPERFAMILY SSF51690 110 273 5.49E-57 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CYCME_RS00955 abf421d0028d18bb1763c6e41d50adec 205 SUPERFAMILY SSF53335 28 199 3.16E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS00955 abf421d0028d18bb1763c6e41d50adec 205 Pfam PF13489 Methyltransferase domain 29 180 2.0E-13 T 23-04-2016 CYCME_RS00955 abf421d0028d18bb1763c6e41d50adec 205 Gene3D G3DSA:3.40.50.150 8 196 1.0E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS06825 31c01c1b5c1042bd841744adb0ef0e7d 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 289 4.9E-146 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS06825 31c01c1b5c1042bd841744adb0ef0e7d 294 Gene3D G3DSA:3.90.550.10 1 270 6.2E-69 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06825 31c01c1b5c1042bd841744adb0ef0e7d 294 Pfam PF00483 Nucleotidyl transferase 2 240 1.2E-71 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CYCME_RS06825 31c01c1b5c1042bd841744adb0ef0e7d 294 PANTHER PTHR22572:SF105 2 270 5.4E-159 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS06825 31c01c1b5c1042bd841744adb0ef0e7d 294 PANTHER PTHR22572 2 270 5.4E-159 T 23-04-2016 CYCME_RS06825 31c01c1b5c1042bd841744adb0ef0e7d 294 SUPERFAMILY SSF53448 1 288 8.02E-90 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS10560 892e020f8be2b1a07ed84d51faf19b5f 136 PIRSF PIRSF003230 1 136 7.6E-44 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CYCME_RS10560 892e020f8be2b1a07ed84d51faf19b5f 136 Gene3D G3DSA:3.10.129.10 5 135 1.4E-43 T 23-04-2016 IPR029069 HotDog domain CYCME_RS10560 892e020f8be2b1a07ed84d51faf19b5f 136 PANTHER PTHR31793:SF9 1 135 2.0E-41 T 23-04-2016 CYCME_RS10560 892e020f8be2b1a07ed84d51faf19b5f 136 PANTHER PTHR31793 1 135 2.0E-41 T 23-04-2016 CYCME_RS10560 892e020f8be2b1a07ed84d51faf19b5f 136 Pfam PF03061 Thioesterase superfamily 20 103 4.1E-15 T 23-04-2016 IPR006683 Thioesterase domain CYCME_RS10560 892e020f8be2b1a07ed84d51faf19b5f 136 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 133 1.6E-47 T 23-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- CYCME_RS10560 892e020f8be2b1a07ed84d51faf19b5f 136 SUPERFAMILY SSF54637 1 135 1.43E-36 T 23-04-2016 IPR029069 HotDog domain CYCME_RS10560 892e020f8be2b1a07ed84d51faf19b5f 136 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 128 2.7E-35 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CYCME_RS10950 a53501c48cda3deb71a8d465cf49757a 140 PANTHER PTHR38767 2 140 2.0E-31 T 23-04-2016 CYCME_RS10950 a53501c48cda3deb71a8d465cf49757a 140 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 136 7.0E-41 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CYCME_RS10950 a53501c48cda3deb71a8d465cf49757a 140 SUPERFAMILY SSF102400 1 139 2.88E-42 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CYCME_RS10950 a53501c48cda3deb71a8d465cf49757a 140 Gene3D G3DSA:3.40.50.10110 1 139 2.0E-45 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CYCME_RS00285 a7ece350b4e7de40755684af4621ca3d 184 Pfam PF05137 Fimbrial assembly protein (PilN) 100 172 3.3E-24 T 23-04-2016 IPR007813 Fimbrial assembly PilN CYCME_RS00285 a7ece350b4e7de40755684af4621ca3d 184 PANTHER PTHR40278 1 175 1.9E-41 T 23-04-2016 CYCME_RS00285 a7ece350b4e7de40755684af4621ca3d 184 PANTHER PTHR40278:SF1 1 175 1.9E-41 T 23-04-2016 CYCME_RS00565 ddf46ede4c4b8f7d821d99278a1ccd33 397 PANTHER PTHR30572 3 397 3.3E-72 T 23-04-2016 CYCME_RS00565 ddf46ede4c4b8f7d821d99278a1ccd33 397 Pfam PF02687 FtsX-like permease family 277 390 1.3E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CYCME_RS00565 ddf46ede4c4b8f7d821d99278a1ccd33 397 Pfam PF12704 MacB-like periplasmic core domain 21 240 1.4E-31 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 PANTHER PTHR34933:SF2 6 226 4.1E-81 T 23-04-2016 CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 223 26.665 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 PRINTS PR01008 Flagellar L-ring protein signature 186 200 4.1E-22 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 PRINTS PR01008 Flagellar L-ring protein signature 202 216 4.1E-22 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 PRINTS PR01008 Flagellar L-ring protein signature 139 154 4.1E-22 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 PRINTS PR01008 Flagellar L-ring protein signature 66 78 4.1E-22 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 PRINTS PR01008 Flagellar L-ring protein signature 165 181 4.1E-22 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 PANTHER PTHR34933 6 226 4.1E-81 T 23-04-2016 CYCME_RS05195 9a160c7213c4d5423732e1e1ca0b10e7 226 Pfam PF02107 Flagellar L-ring protein 44 223 1.9E-61 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CYCME_RS10445 ff49e8bd60af99c0189b795502877fe0 95 PANTHER PTHR30341 1 87 8.4E-15 T 23-04-2016 CYCME_RS10445 ff49e8bd60af99c0189b795502877fe0 95 Pfam PF06965 Na+/H+ antiporter 1 1 87 1.0E-21 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CYCME_RS10445 ff49e8bd60af99c0189b795502877fe0 95 Gene3D G3DSA:1.20.1530.10 1 93 4.2E-24 T 23-04-2016 IPR023171 Na/H antiporter domain CYCME_RS10445 ff49e8bd60af99c0189b795502877fe0 95 PANTHER PTHR30341:SF0 1 87 8.4E-15 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CYCME_RS05150 bb3b016e6f5cda7de9c8433805b7d2d4 163 Gene3D G3DSA:1.20.58.300 7 135 5.3E-22 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CYCME_RS05150 bb3b016e6f5cda7de9c8433805b7d2d4 163 SUPERFAMILY SSF140566 6 135 5.62E-19 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CYCME_RS05150 bb3b016e6f5cda7de9c8433805b7d2d4 163 Pfam PF05130 FlgN protein 6 151 3.9E-23 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CYCME_RS09830 7e4bb70b3afc94fccc85d5a9e8509045 362 Gene3D G3DSA:2.40.50.100 64 97 1.1E-15 T 23-04-2016 CYCME_RS09830 7e4bb70b3afc94fccc85d5a9e8509045 362 Gene3D G3DSA:2.40.50.100 172 203 1.1E-15 T 23-04-2016 CYCME_RS09830 7e4bb70b3afc94fccc85d5a9e8509045 362 SUPERFAMILY SSF111369 53 282 2.88E-22 T 23-04-2016 CYCME_RS09830 7e4bb70b3afc94fccc85d5a9e8509045 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 275 1.8E-24 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CYCME_RS09830 7e4bb70b3afc94fccc85d5a9e8509045 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 356 7.2E-59 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS09830 7e4bb70b3afc94fccc85d5a9e8509045 362 PANTHER PTHR30469 10 358 2.8E-62 T 23-04-2016 CYCME_RS09830 7e4bb70b3afc94fccc85d5a9e8509045 362 PANTHER PTHR30469:SF15 10 358 2.8E-62 T 23-04-2016 CYCME_RS11940 a89aea9c2c9f9e98111ee8343f73d1e6 234 SUPERFAMILY SSF56281 17 206 7.04E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS11940 a89aea9c2c9f9e98111ee8343f73d1e6 234 Gene3D G3DSA:3.60.15.10 14 218 1.2E-57 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS11940 a89aea9c2c9f9e98111ee8343f73d1e6 234 PANTHER PTHR11935 18 203 1.4E-51 T 23-04-2016 CYCME_RS11940 a89aea9c2c9f9e98111ee8343f73d1e6 234 Pfam PF00753 Metallo-beta-lactamase superfamily 18 168 1.6E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS11940 a89aea9c2c9f9e98111ee8343f73d1e6 234 SMART SM00849 17 180 4.0E-30 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS00720 232fce24f36b16091f1aa00e047a0406 203 Pfam PF04326 Putative DNA-binding domain 49 184 6.2E-19 T 23-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 CYCME_RS00720 232fce24f36b16091f1aa00e047a0406 203 PANTHER PTHR12155 44 128 1.7E-13 T 23-04-2016 IPR029684 Schlafen family CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 PANTHER PTHR10799:SF774 195 497 2.4E-35 T 23-04-2016 CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 PANTHER PTHR10799:SF774 15 27 2.4E-35 T 23-04-2016 CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 SUPERFAMILY SSF55073 346 501 1.88E-51 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 211 335 1.6E-8 T 23-04-2016 IPR000014 PAS domain CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 Pfam PF00990 Diguanylate cyclase, GGDEF domain 341 498 2.8E-48 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 PANTHER PTHR10799 195 497 2.4E-35 T 23-04-2016 CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 PANTHER PTHR10799 15 27 2.4E-35 T 23-04-2016 CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 31 101 4.8E-12 T 23-04-2016 IPR029095 NarX-like, N-terminal CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 Gene3D G3DSA:3.30.450.20 212 343 2.3E-12 T 23-04-2016 CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 SUPERFAMILY SSF55785 218 333 7.04E-10 T 23-04-2016 IPR000014 PAS domain CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 SMART SM00267 330 502 1.7E-65 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 Gene3D G3DSA:3.30.70.270 344 502 1.1E-57 T 23-04-2016 CYCME_RS09635 3962f8c8b3706dc77c2fb94e70547c3f 503 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 339 501 2.0E-45 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS09630 98b517a54eee65ce1619d50e5c8d596b 151 Pfam PF14437 MafB19-like deaminase 3 150 1.2E-31 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 CYCME_RS09630 98b517a54eee65ce1619d50e5c8d596b 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 91 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CYCME_RS09630 98b517a54eee65ce1619d50e5c8d596b 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 9 150 43.902 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 CYCME_RS09630 98b517a54eee65ce1619d50e5c8d596b 151 Gene3D G3DSA:3.40.140.10 3 149 8.0E-57 T 23-04-2016 CYCME_RS09630 98b517a54eee65ce1619d50e5c8d596b 151 PANTHER PTHR11079 5 150 5.8E-50 T 23-04-2016 CYCME_RS09630 98b517a54eee65ce1619d50e5c8d596b 151 SUPERFAMILY SSF53927 2 150 1.47E-55 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 Gene3D G3DSA:3.30.470.20 204 444 2.1E-94 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 SUPERFAMILY SSF51246 331 444 9.42E-40 T 23-04-2016 IPR011054 Rudiment single hybrid motif CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 PANTHER PTHR18866 1 442 1.1E-287 T 23-04-2016 CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 5.4E-81 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 SUPERFAMILY SSF56059 83 343 2.3E-66 T 23-04-2016 CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 8.7E-222 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 Gene3D G3DSA:3.40.50.20 1 129 5.6E-53 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 SUPERFAMILY SSF52440 1 113 1.8E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.0E-37 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.0E-46 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 SMART SM00878 336 441 1.5E-57 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CYCME_RS02935 c2cbc476c3d9df96f755d99c4e8047c7 446 Gene3D G3DSA:3.30.1490.20 130 203 1.3E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 PANTHER PTHR30435:SF1 304 426 2.5E-85 T 23-04-2016 CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 PANTHER PTHR30435:SF1 1 123 2.5E-85 T 23-04-2016 CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 Pfam PF00460 Flagella basal body rod protein 3 33 1.2E-9 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 408 2.9E-97 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 SUPERFAMILY SSF117143 79 387 9.29E-71 T 23-04-2016 CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 Pfam PF07559 Flagellar basal body protein FlaE 185 307 2.6E-26 T 23-04-2016 IPR011491 Flagellar hook protein FlgE CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 PANTHER PTHR30435 304 426 2.5E-85 T 23-04-2016 CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 PANTHER PTHR30435 1 123 2.5E-85 T 23-04-2016 CYCME_RS05180 17dc5b22a3545a6eeefad9155a601c0d 426 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 349 425 2.5E-16 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CYCME_RS08140 a9c1619ab3e5ef7918db6a136c72d4f6 299 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 243 264 - T 23-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CYCME_RS08140 a9c1619ab3e5ef7918db6a136c72d4f6 299 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 265 2.7E-10 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS08140 a9c1619ab3e5ef7918db6a136c72d4f6 299 SUPERFAMILY SSF54593 2 273 5.57E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS08140 a9c1619ab3e5ef7918db6a136c72d4f6 299 Gene3D G3DSA:3.10.180.10 3 140 1.9E-31 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS08140 a9c1619ab3e5ef7918db6a136c72d4f6 299 Gene3D G3DSA:3.10.180.10 141 297 1.1E-43 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS10150 1fdf32146a0f64ea95343d4731b88a8c 200 Gene3D G3DSA:1.10.287.460 1 85 4.8E-21 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CYCME_RS10150 1fdf32146a0f64ea95343d4731b88a8c 200 PANTHER PTHR10516:SF320 56 200 2.5E-56 T 23-04-2016 CYCME_RS10150 1fdf32146a0f64ea95343d4731b88a8c 200 PANTHER PTHR10516 56 200 2.5E-56 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CYCME_RS10150 1fdf32146a0f64ea95343d4731b88a8c 200 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 1 102 8.0E-23 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CYCME_RS10150 1fdf32146a0f64ea95343d4731b88a8c 200 Gene3D G3DSA:3.10.50.40 86 199 3.9E-46 T 23-04-2016 CYCME_RS10150 1fdf32146a0f64ea95343d4731b88a8c 200 SUPERFAMILY SSF54534 6 200 7.86E-55 T 23-04-2016 CYCME_RS10150 1fdf32146a0f64ea95343d4731b88a8c 200 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 109 197 3.0E-29 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CYCME_RS11450 3db615d1964637c3a121cadd091c6155 241 PANTHER PTHR36536:SF3 16 241 6.4E-84 T 23-04-2016 CYCME_RS11450 3db615d1964637c3a121cadd091c6155 241 SUPERFAMILY SSF109755 39 226 1.73E-9 T 23-04-2016 CYCME_RS11450 3db615d1964637c3a121cadd091c6155 241 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 22 241 8.4E-49 T 23-04-2016 IPR002727 Protein of unknown function DUF47 CYCME_RS11450 3db615d1964637c3a121cadd091c6155 241 PANTHER PTHR36536 16 241 6.4E-84 T 23-04-2016 CYCME_RS11450 3db615d1964637c3a121cadd091c6155 241 Pfam PF01865 Protein of unknown function DUF47 24 241 1.3E-50 T 23-04-2016 IPR018445 Putative phosphate transport regulator CYCME_RS04015 a4f505f6c947669f18bc5151f6fd2ae2 179 PANTHER PTHR21485 6 169 9.5E-43 T 23-04-2016 CYCME_RS04015 a4f505f6c947669f18bc5151f6fd2ae2 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 16 129 1.1E-13 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CYCME_RS04015 a4f505f6c947669f18bc5151f6fd2ae2 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 15 167 2.3E-47 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CYCME_RS04015 a4f505f6c947669f18bc5151f6fd2ae2 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 83 147 3.1E-9 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS04015 a4f505f6c947669f18bc5151f6fd2ae2 179 SUPERFAMILY SSF56784 11 169 1.68E-38 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS04015 a4f505f6c947669f18bc5151f6fd2ae2 179 Gene3D G3DSA:3.40.50.1000 8 167 1.2E-39 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS04015 a4f505f6c947669f18bc5151f6fd2ae2 179 PIRSF PIRSF006118 2 176 2.3E-62 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CYCME_RS10845 3b8bb44539e3279681bc32563bd197b7 312 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 1.2E-100 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CYCME_RS10845 3b8bb44539e3279681bc32563bd197b7 312 PANTHER PTHR30426 1 285 2.3E-153 T 23-04-2016 CYCME_RS10845 3b8bb44539e3279681bc32563bd197b7 312 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.95 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CYCME_RS10845 3b8bb44539e3279681bc32563bd197b7 312 Pfam PF02401 LytB protein 3 284 3.7E-93 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CYCME_RS05275 6b20dcbd2d4251057491c573dd8436f2 98 SUPERFAMILY SSF82657 2 89 1.44E-27 T 23-04-2016 IPR002634 BolA protein CYCME_RS05275 6b20dcbd2d4251057491c573dd8436f2 98 Pfam PF01722 BolA-like protein 12 88 7.7E-29 T 23-04-2016 IPR002634 BolA protein CYCME_RS05275 6b20dcbd2d4251057491c573dd8436f2 98 PIRSF PIRSF003113 1 97 8.0E-28 T 23-04-2016 IPR002634 BolA protein CYCME_RS05275 6b20dcbd2d4251057491c573dd8436f2 98 PANTHER PTHR12735:SF24 1 88 2.3E-30 T 23-04-2016 CYCME_RS05275 6b20dcbd2d4251057491c573dd8436f2 98 Gene3D G3DSA:3.30.70.1500 2 85 1.5E-26 T 23-04-2016 CYCME_RS05275 6b20dcbd2d4251057491c573dd8436f2 98 PANTHER PTHR12735 1 88 2.3E-30 T 23-04-2016 CYCME_RS10855 a5d0cbf5056321d4a47a65b338ab5988 298 PANTHER PTHR10992 25 290 5.2E-30 T 23-04-2016 CYCME_RS10855 a5d0cbf5056321d4a47a65b338ab5988 298 Gene3D G3DSA:3.40.50.1820 25 290 6.1E-65 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10855 a5d0cbf5056321d4a47a65b338ab5988 298 SUPERFAMILY SSF53474 11 279 5.2E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS10855 a5d0cbf5056321d4a47a65b338ab5988 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 235 249 8.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS10855 a5d0cbf5056321d4a47a65b338ab5988 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 8.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS10855 a5d0cbf5056321d4a47a65b338ab5988 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 8.3E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS10855 a5d0cbf5056321d4a47a65b338ab5988 298 Pfam PF00561 alpha/beta hydrolase fold 39 156 8.9E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS00100 b15a6f0be255f545a962f0f9f79e0b6d 182 SUPERFAMILY SSF56784 6 160 2.34E-40 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS00100 b15a6f0be255f545a962f0f9f79e0b6d 182 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 10 150 9.4E-46 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CYCME_RS00100 b15a6f0be255f545a962f0f9f79e0b6d 182 Gene3D G3DSA:3.40.50.1000 10 177 8.5E-49 T 23-04-2016 IPR023214 HAD-like domain CYCME_RS00100 b15a6f0be255f545a962f0f9f79e0b6d 182 PANTHER PTHR23133:SF7 10 182 5.0E-62 T 23-04-2016 CYCME_RS00100 b15a6f0be255f545a962f0f9f79e0b6d 182 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 10 152 4.0E-35 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CYCME_RS00100 b15a6f0be255f545a962f0f9f79e0b6d 182 Pfam PF13242 HAD-hyrolase-like 105 176 2.1E-12 T 23-04-2016 CYCME_RS00100 b15a6f0be255f545a962f0f9f79e0b6d 182 PIRSF PIRSF004682 1 177 6.7E-52 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CYCME_RS00100 b15a6f0be255f545a962f0f9f79e0b6d 182 PANTHER PTHR23133 10 182 5.0E-62 T 23-04-2016 CYCME_RS10285 9fe9122848c3ee8ac16311070afee6a9 121 Gene3D G3DSA:3.10.20.30 12 101 3.6E-21 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS10285 9fe9122848c3ee8ac16311070afee6a9 121 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 93 6.1E-15 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS10285 9fe9122848c3ee8ac16311070afee6a9 121 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 49 57 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CYCME_RS10285 9fe9122848c3ee8ac16311070afee6a9 121 SUPERFAMILY SSF54292 13 101 1.97E-21 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CYCME_RS04645 34a9a84374f3bbabb9c4c3c5c6c24327 206 PIRSF PIRSF020606 1 202 9.5E-76 T 23-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 CYCME_RS04645 34a9a84374f3bbabb9c4c3c5c6c24327 206 Pfam PF09997 Predicted membrane protein (DUF2238) 40 180 1.8E-57 T 23-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 CYCME_RS07455 5f2bf7faf4e9c536b01802a1a76284dc 293 Gene3D G3DSA:3.30.70.1400 14 99 9.8E-28 T 23-04-2016 CYCME_RS07455 5f2bf7faf4e9c536b01802a1a76284dc 293 Pfam PF01571 Aminomethyltransferase folate-binding domain 4 108 2.5E-12 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal CYCME_RS07455 5f2bf7faf4e9c536b01802a1a76284dc 293 PANTHER PTHR22602 11 221 1.5E-48 T 23-04-2016 CYCME_RS07455 5f2bf7faf4e9c536b01802a1a76284dc 293 PANTHER PTHR22602:SF0 11 221 1.5E-48 T 23-04-2016 CYCME_RS07455 5f2bf7faf4e9c536b01802a1a76284dc 293 SUPERFAMILY SSF103025 11 215 5.18E-52 T 23-04-2016 CYCME_RS07455 5f2bf7faf4e9c536b01802a1a76284dc 293 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 160 224 1.4E-28 T 23-04-2016 IPR017703 YgfZ/GcvT conserved site CYCME_RS07455 5f2bf7faf4e9c536b01802a1a76284dc 293 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 199 266 1.3E-5 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 Gene3D G3DSA:3.40.190.10 166 260 9.8E-23 T 23-04-2016 CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 Gene3D G3DSA:3.40.190.10 91 165 6.1E-6 T 23-04-2016 CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.5E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 SUPERFAMILY SSF53850 89 292 4.71E-43 T 23-04-2016 CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 Pfam PF03466 LysR substrate binding domain 88 292 1.0E-42 T 23-04-2016 IPR005119 LysR, substrate-binding CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 SUPERFAMILY SSF46785 3 84 1.12E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 PANTHER PTHR30537 1 292 9.6E-105 T 23-04-2016 CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 PANTHER PTHR30537:SF5 1 292 9.6E-105 T 23-04-2016 CYCME_RS11340 d1e4def2394715658144007a376b46a7 295 Gene3D G3DSA:1.10.10.10 3 83 2.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS04100 9435a2c4c43378f1f3e6287ab15b65cf 147 Gene3D G3DSA:3.10.129.10 3 137 2.7E-36 T 23-04-2016 IPR029069 HotDog domain CYCME_RS04100 9435a2c4c43378f1f3e6287ab15b65cf 147 Pfam PF13279 Thioesterase-like superfamily 14 133 3.0E-17 T 23-04-2016 CYCME_RS04100 9435a2c4c43378f1f3e6287ab15b65cf 147 SUPERFAMILY SSF54637 4 136 1.39E-31 T 23-04-2016 IPR029069 HotDog domain CYCME_RS04100 9435a2c4c43378f1f3e6287ab15b65cf 147 PANTHER PTHR31793 6 147 8.0E-32 T 23-04-2016 CYCME_RS09235 d58ca2734894c9ea88523e81686da289 87 PANTHER PTHR21180 23 82 8.3E-20 T 23-04-2016 CYCME_RS09235 d58ca2734894c9ea88523e81686da289 87 Pfam PF12836 Helix-hairpin-helix motif 23 82 4.8E-22 T 23-04-2016 CYCME_RS09235 d58ca2734894c9ea88523e81686da289 87 SMART SM00278 62 81 3.9 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS09235 d58ca2734894c9ea88523e81686da289 87 SMART SM00278 32 51 0.33 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CYCME_RS09235 d58ca2734894c9ea88523e81686da289 87 Gene3D G3DSA:1.10.150.280 22 85 1.4E-17 T 23-04-2016 CYCME_RS09235 d58ca2734894c9ea88523e81686da289 87 SUPERFAMILY SSF47781 22 84 1.45E-24 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CYCME_RS09235 d58ca2734894c9ea88523e81686da289 87 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 22 83 1.4E-24 T 23-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CYCME_RS01130 962cdfcf0e1a9b11933a653395b59558 282 Gene3D G3DSA:3.40.50.1820 3 276 1.0E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS01130 962cdfcf0e1a9b11933a653395b59558 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 5.8E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS01130 962cdfcf0e1a9b11933a653395b59558 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 222 236 5.8E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS01130 962cdfcf0e1a9b11933a653395b59558 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 5.8E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS01130 962cdfcf0e1a9b11933a653395b59558 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 5.8E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS01130 962cdfcf0e1a9b11933a653395b59558 282 Pfam PF12697 Alpha/beta hydrolase family 26 266 1.1E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS01130 962cdfcf0e1a9b11933a653395b59558 282 PANTHER PTHR10992 17 278 3.9E-44 T 23-04-2016 CYCME_RS01130 962cdfcf0e1a9b11933a653395b59558 282 SUPERFAMILY SSF53474 4 276 3.11E-50 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS04615 8149c5c0f3c0ab59ca12120ac0f297a5 299 PANTHER PTHR31367:SF5 1 299 1.3E-136 T 23-04-2016 CYCME_RS04615 8149c5c0f3c0ab59ca12120ac0f297a5 299 PANTHER PTHR31367 1 299 1.3E-136 T 23-04-2016 CYCME_RS04615 8149c5c0f3c0ab59ca12120ac0f297a5 299 Pfam PF06189 5'-nucleotidase 39 297 4.1E-114 T 23-04-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: REACT_1698 CYCME_RS08485 bd9177a79d42e96d382d736aecb3f7e8 128 Pfam PF03748 Flagellar basal body-associated protein FliL 29 128 1.1E-19 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CYCME_RS08485 bd9177a79d42e96d382d736aecb3f7e8 128 PANTHER PTHR35091 25 128 5.7E-21 T 23-04-2016 CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 SUPERFAMILY SSF74982 6 137 1.06E-48 T 23-04-2016 IPR023620 Small protein B CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 13 137 6.0E-41 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 13 155 1.7E-52 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 PANTHER PTHR30308:SF2 1 155 1.3E-71 T 23-04-2016 CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 Gene3D G3DSA:2.40.280.10 12 132 9.0E-48 T 23-04-2016 IPR023620 Small protein B CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 68.925 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 Pfam PF01668 SmpB protein 13 74 5.3E-30 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 PANTHER PTHR30308 1 155 1.3E-71 T 23-04-2016 CYCME_RS04860 a241abf5fd28f71144dd25042c4d5775 158 ProSitePatterns PS01317 SsrA-binding protein. 31 43 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 SUPERFAMILY SSF54611 13 144 2.62E-50 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 Gene3D G3DSA:3.10.420.10 6 148 6.7E-55 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 PANTHER PTHR36918:SF1 1 146 6.8E-57 T 23-04-2016 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 PANTHER PTHR36918 1 146 6.8E-57 T 23-04-2016 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 32.792 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 2.4E-33 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 2.4E-33 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 2.4E-33 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 2.4E-33 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 12 145 3.4E-46 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS00165 78a2db1e212026178e74323711a6c9b9 153 Pfam PF02556 Preprotein translocase subunit SecB 9 146 2.5E-54 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CYCME_RS03420 776952fbf63e2debd3fea2cb263db86d 340 Pfam PF01636 Phosphotransferase enzyme family 25 263 2.3E-30 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase CYCME_RS03420 776952fbf63e2debd3fea2cb263db86d 340 Gene3D G3DSA:3.90.1200.10 97 327 1.2E-65 T 23-04-2016 CYCME_RS03420 776952fbf63e2debd3fea2cb263db86d 340 PANTHER PTHR33540 13 329 7.1E-99 T 23-04-2016 CYCME_RS03420 776952fbf63e2debd3fea2cb263db86d 340 SUPERFAMILY SSF56112 8 332 4.53E-54 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS03420 776952fbf63e2debd3fea2cb263db86d 340 PANTHER PTHR33540:SF1 13 329 7.1E-99 T 23-04-2016 CYCME_RS03420 776952fbf63e2debd3fea2cb263db86d 340 Gene3D G3DSA:3.30.200.20 3 93 1.3E-27 T 23-04-2016 CYCME_RS03735 84a75a58287a074e03af6342cf997cb5 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.752 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03735 84a75a58287a074e03af6342cf997cb5 117 SUPERFAMILY SSF53137 3 115 6.98E-52 T 23-04-2016 CYCME_RS03735 84a75a58287a074e03af6342cf997cb5 117 Gene3D G3DSA:3.30.420.100 22 117 2.9E-38 T 23-04-2016 CYCME_RS03735 84a75a58287a074e03af6342cf997cb5 117 PANTHER PTHR12899 1 117 9.2E-43 T 23-04-2016 CYCME_RS03735 84a75a58287a074e03af6342cf997cb5 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.3E-39 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03735 84a75a58287a074e03af6342cf997cb5 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 6.2E-41 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS00120 04a772f3e603ebda413076a4357c87ba 74 PANTHER PTHR33279 1 72 2.6E-16 T 23-04-2016 CYCME_RS00120 04a772f3e603ebda413076a4357c87ba 74 Gene3D G3DSA:3.30.110.40 2 70 1.1E-24 T 23-04-2016 IPR001455 TusA-like domain CYCME_RS00120 04a772f3e603ebda413076a4357c87ba 74 Pfam PF01206 Sulfurtransferase TusA 2 70 6.6E-23 T 23-04-2016 IPR001455 TusA-like domain CYCME_RS00120 04a772f3e603ebda413076a4357c87ba 74 SUPERFAMILY SSF64307 1 71 6.15E-22 T 23-04-2016 IPR001455 TusA-like domain CYCME_RS00245 8cae63849a26feb9db426186217112fa 337 PANTHER PTHR22726 7 334 5.4E-85 T 23-04-2016 CYCME_RS00245 8cae63849a26feb9db426186217112fa 337 Gene3D G3DSA:3.30.2010.10 54 136 6.8E-20 T 23-04-2016 CYCME_RS00245 8cae63849a26feb9db426186217112fa 337 PANTHER PTHR22726:SF9 7 334 5.4E-85 T 23-04-2016 CYCME_RS00245 8cae63849a26feb9db426186217112fa 337 Pfam PF01435 Peptidase family M48 59 245 1.4E-35 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 SUPERFAMILY SSF48179 183 279 5.27E-20 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 Gene3D G3DSA:3.40.50.720 1 172 1.8E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 PANTHER PTHR11374:SF18 1 417 8.9E-88 T 23-04-2016 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 160 7.6E-9 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 183 274 5.6E-20 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 Gene3D G3DSA:1.20.5.100 183 212 3.1E-6 T 23-04-2016 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 PIRSF PIRSF000124 1 417 1.6E-87 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 Gene3D G3DSA:3.40.50.720 214 417 8.0E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 SMART SM00984 298 402 1.3E-37 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 398 1.0E-61 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 SUPERFAMILY SSF52413 283 412 7.32E-31 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 PIRSF PIRSF500134 1 417 3.5E-102 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 SUPERFAMILY SSF51735 1 173 1.26E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 PANTHER PTHR11374 1 417 8.9E-88 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CYCME_RS02290 aab1325e7f99932bd97523930962cd68 417 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 298 402 1.3E-25 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CYCME_RS05350 aa61fe0143ae131c00b9f813b50e1d35 199 PANTHER PTHR21666 55 193 1.8E-38 T 23-04-2016 CYCME_RS05350 aa61fe0143ae131c00b9f813b50e1d35 199 Pfam PF13511 Domain of unknown function (DUF4124) 12 53 2.3E-6 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 CYCME_RS05350 aa61fe0143ae131c00b9f813b50e1d35 199 Gene3D G3DSA:1.10.530.10 61 192 6.0E-48 T 23-04-2016 CYCME_RS05350 aa61fe0143ae131c00b9f813b50e1d35 199 Pfam PF01464 Transglycosylase SLT domain 72 172 1.1E-26 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CYCME_RS05350 aa61fe0143ae131c00b9f813b50e1d35 199 SUPERFAMILY SSF53955 59 193 1.13E-45 T 23-04-2016 IPR023346 Lysozyme-like domain CYCME_RS04570 2810473032c3b3fc8e1d32d6bdf09525 245 PANTHER PTHR30433:SF3 2 245 1.8E-114 T 23-04-2016 IPR022522 Flagellar motor stator, MotA CYCME_RS04570 2810473032c3b3fc8e1d32d6bdf09525 245 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 220 5.8E-27 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CYCME_RS04570 2810473032c3b3fc8e1d32d6bdf09525 245 PANTHER PTHR30433 2 245 1.8E-114 T 23-04-2016 CYCME_RS00585 c25820b973893cabb2f50746795f3d09 359 PIRSF PIRSF005508 1 359 1.3E-122 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CYCME_RS00585 c25820b973893cabb2f50746795f3d09 359 PANTHER PTHR10361:SF31 7 105 2.6E-124 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CYCME_RS00585 c25820b973893cabb2f50746795f3d09 359 PANTHER PTHR10361:SF31 127 353 2.6E-124 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CYCME_RS00585 c25820b973893cabb2f50746795f3d09 359 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 9 349 3.0E-115 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CYCME_RS00585 c25820b973893cabb2f50746795f3d09 359 Pfam PF01758 Sodium Bile acid symporter family 54 261 3.1E-55 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS00585 c25820b973893cabb2f50746795f3d09 359 PANTHER PTHR10361 7 105 2.6E-124 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS00585 c25820b973893cabb2f50746795f3d09 359 PANTHER PTHR10361 127 353 2.6E-124 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS01805 d5c3c698a86f7474111cb345a87d6e5b 548 SUPERFAMILY SSF56112 193 432 8.09E-53 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS01805 d5c3c698a86f7474111cb345a87d6e5b 548 SUPERFAMILY SSF56112 95 158 8.09E-53 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS01805 d5c3c698a86f7474111cb345a87d6e5b 548 Gene3D G3DSA:3.90.1200.10 249 311 3.4E-5 T 23-04-2016 CYCME_RS01805 d5c3c698a86f7474111cb345a87d6e5b 548 Pfam PF03109 ABC1 family 114 231 6.4E-35 T 23-04-2016 IPR004147 UbiB domain CYCME_RS01805 d5c3c698a86f7474111cb345a87d6e5b 548 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 441 3.2E-182 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 CYCME_RS01805 d5c3c698a86f7474111cb345a87d6e5b 548 PANTHER PTHR10566:SF79 1 547 1.4E-245 T 23-04-2016 CYCME_RS01805 d5c3c698a86f7474111cb345a87d6e5b 548 PANTHER PTHR10566 1 547 1.4E-245 T 23-04-2016 CYCME_RS01805 d5c3c698a86f7474111cb345a87d6e5b 548 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 4 547 51.226 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 CYCME_RS03150 4851dc52bdc496f267042f575d0087c5 319 Pfam PF02687 FtsX-like permease family 196 314 1.8E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CYCME_RS03150 4851dc52bdc496f267042f575d0087c5 319 PIRSF PIRSF003097 21 316 1.9E-61 T 23-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CYCME_RS05835 283276a4a10ae6fd52dc441dee6c0b8f 218 SUPERFAMILY SSF100950 5 216 1.94E-73 T 23-04-2016 CYCME_RS05835 283276a4a10ae6fd52dc441dee6c0b8f 218 SMART SM00882 6 202 1.2E-67 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CYCME_RS05835 283276a4a10ae6fd52dc441dee6c0b8f 218 PANTHER PTHR13707 5 209 3.5E-117 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CYCME_RS05835 283276a4a10ae6fd52dc441dee6c0b8f 218 Pfam PF01144 Coenzyme A transferase 7 201 2.0E-42 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CYCME_RS05835 283276a4a10ae6fd52dc441dee6c0b8f 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 5.4E-97 T 23-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 CYCME_RS05835 283276a4a10ae6fd52dc441dee6c0b8f 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 CYCME_RS05835 283276a4a10ae6fd52dc441dee6c0b8f 218 Gene3D G3DSA:3.40.810.20 4 210 2.4E-90 T 23-04-2016 CYCME_RS03535 885c0d77d9a4bcffc08d7c375eebf3fa 196 PANTHER PTHR30634:SF11 8 195 8.3E-14 T 23-04-2016 CYCME_RS03535 885c0d77d9a4bcffc08d7c375eebf3fa 196 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 11 193 1.5E-22 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CYCME_RS03535 885c0d77d9a4bcffc08d7c375eebf3fa 196 Gene3D G3DSA:2.50.20.10 11 193 3.1E-30 T 23-04-2016 CYCME_RS03535 885c0d77d9a4bcffc08d7c375eebf3fa 196 PANTHER PTHR30634 8 195 8.3E-14 T 23-04-2016 CYCME_RS03535 885c0d77d9a4bcffc08d7c375eebf3fa 196 Pfam PF03550 Outer membrane lipoprotein LolB 44 192 8.6E-28 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CYCME_RS03535 885c0d77d9a4bcffc08d7c375eebf3fa 196 SUPERFAMILY SSF89392 30 193 3.77E-27 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX CYCME_RS00490 f29e51db658933c49d03edd33626e070 119 Gene3D G3DSA:3.30.1130.10 1 114 8.6E-42 T 23-04-2016 CYCME_RS00490 f29e51db658933c49d03edd33626e070 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 8.0E-36 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS00490 f29e51db658933c49d03edd33626e070 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 7.3E-28 T 23-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS00490 f29e51db658933c49d03edd33626e070 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 7.9E-34 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS00490 f29e51db658933c49d03edd33626e070 119 SUPERFAMILY SSF55620 1 114 1.22E-36 T 23-04-2016 CYCME_RS00490 f29e51db658933c49d03edd33626e070 119 SMART SM00905 4 114 3.9E-46 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CYCME_RS00490 f29e51db658933c49d03edd33626e070 119 PANTHER PTHR20941 1 118 6.0E-30 T 23-04-2016 CYCME_RS00205 2c2916ca0b898805eeee38623b6b3877 150 PIRSF PIRSF030820 1 150 4.4E-43 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 CYCME_RS00205 2c2916ca0b898805eeee38623b6b3877 150 Pfam PF06073 Bacterial protein of unknown function (DUF934) 50 149 4.4E-34 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 CYCME_RS06195 196f7ccbd18bbf48c219fe55868436e2 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.423 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CYCME_RS06195 196f7ccbd18bbf48c219fe55868436e2 72 PANTHER PTHR33370 1 72 1.7E-49 T 23-04-2016 CYCME_RS06195 196f7ccbd18bbf48c219fe55868436e2 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.6E-38 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CYCME_RS06195 196f7ccbd18bbf48c219fe55868436e2 72 SUPERFAMILY SSF50249 1 70 3.43E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS06195 196f7ccbd18bbf48c219fe55868436e2 72 SMART SM00316 4 72 6.9E-7 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS06195 196f7ccbd18bbf48c219fe55868436e2 72 Gene3D G3DSA:2.40.50.140 1 72 3.0E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS06195 196f7ccbd18bbf48c219fe55868436e2 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.0E-28 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 Pfam PF01266 FAD dependent oxidoreductase 9 332 3.2E-25 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 PANTHER PTHR13847 4 342 1.2E-16 T 23-04-2016 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 Gene3D G3DSA:3.30.9.10 190 297 1.1E-15 T 23-04-2016 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 SUPERFAMILY SSF51971 4 225 4.59E-17 T 23-04-2016 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 SUPERFAMILY SSF51971 283 340 4.59E-17 T 23-04-2016 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 Gene3D G3DSA:3.50.50.60 144 189 3.1E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 Gene3D G3DSA:3.50.50.60 8 83 3.1E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 SUPERFAMILY SSF54373 212 297 4.71E-12 T 23-04-2016 CYCME_RS01385 6654f5b18113f7a761e7b4595a263acf 360 PANTHER PTHR13847:SF180 4 342 1.2E-16 T 23-04-2016 CYCME_RS07035 a94461255b583b8c7ddd8a48dbd86be4 395 SUPERFAMILY SSF53756 12 390 2.17E-69 T 23-04-2016 CYCME_RS07035 a94461255b583b8c7ddd8a48dbd86be4 395 Pfam PF13439 Glycosyltransferase Family 4 17 177 1.4E-11 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CYCME_RS07035 a94461255b583b8c7ddd8a48dbd86be4 395 Gene3D G3DSA:3.40.50.2000 195 366 5.2E-26 T 23-04-2016 CYCME_RS07035 a94461255b583b8c7ddd8a48dbd86be4 395 Pfam PF00534 Glycosyl transferases group 1 196 367 4.4E-34 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CYCME_RS07035 a94461255b583b8c7ddd8a48dbd86be4 395 PANTHER PTHR12526 1 50 2.7E-61 T 23-04-2016 CYCME_RS07035 a94461255b583b8c7ddd8a48dbd86be4 395 PANTHER PTHR12526 72 393 2.7E-61 T 23-04-2016 CYCME_RS02160 da08cb246f7c12520fda3b06697adcc3 102 SUPERFAMILY SSF52833 4 101 3.47E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02160 da08cb246f7c12520fda3b06697adcc3 102 PANTHER PTHR11780:SF12 5 102 2.8E-24 T 23-04-2016 CYCME_RS02160 da08cb246f7c12520fda3b06697adcc3 102 PANTHER PTHR11780 5 102 2.8E-24 T 23-04-2016 CYCME_RS02160 da08cb246f7c12520fda3b06697adcc3 102 Gene3D G3DSA:3.40.30.10 4 102 4.6E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS11420 3eb235028a4e706c92cfeb2935025e32 245 Gene3D G3DSA:3.30.420.40 86 243 5.3E-41 T 23-04-2016 CYCME_RS11420 3eb235028a4e706c92cfeb2935025e32 245 SUPERFAMILY SSF53067 117 241 4.06E-27 T 23-04-2016 CYCME_RS11420 3eb235028a4e706c92cfeb2935025e32 245 SUPERFAMILY SSF53067 4 113 2.4E-22 T 23-04-2016 CYCME_RS11420 3eb235028a4e706c92cfeb2935025e32 245 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 240 5.9E-28 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CYCME_RS11420 3eb235028a4e706c92cfeb2935025e32 245 PANTHER PTHR34265 44 240 6.0E-29 T 23-04-2016 CYCME_RS11420 3eb235028a4e706c92cfeb2935025e32 245 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 245 17.907 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CYCME_RS11420 3eb235028a4e706c92cfeb2935025e32 245 Pfam PF03309 Type III pantothenate kinase 4 193 1.6E-43 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CYCME_RS07025 64da396e51cfe86da168bb71e76364dd 240 PANTHER PTHR34216 4 205 4.7E-35 T 23-04-2016 CYCME_RS07025 64da396e51cfe86da168bb71e76364dd 240 Gene3D G3DSA:3.20.20.370 48 183 6.8E-30 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CYCME_RS07025 64da396e51cfe86da168bb71e76364dd 240 Pfam PF01522 Polysaccharide deacetylase 50 177 1.9E-30 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CYCME_RS07025 64da396e51cfe86da168bb71e76364dd 240 SUPERFAMILY SSF88713 17 191 4.94E-35 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 688 24.917 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 1.2E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 1.2E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 1.2E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 1.2E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 1.2E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 686 5.2E-231 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 Gene3D G3DSA:1.10.730.10 581 675 8.0E-5 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 PANTHER PTHR30075 1 687 1.2E-301 T 23-04-2016 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 Pfam PF05746 DALR anticodon binding domain 581 676 2.2E-8 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 549 9.7E-203 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CYCME_RS00105 fd2d3afed795a2ece851fe2765715d94 688 SUPERFAMILY SSF109604 350 490 6.8E-16 T 23-04-2016 CYCME_RS08675 099675ba11b6b1de9aa93c2571037b25 159 Pfam PF01899 Na+/H+ ion antiporter subunit 10 137 7.9E-28 T 23-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CYCME_RS08675 099675ba11b6b1de9aa93c2571037b25 159 PANTHER PTHR34584 1 134 3.5E-19 T 23-04-2016 CYCME_RS08675 099675ba11b6b1de9aa93c2571037b25 159 PANTHER PTHR34584:SF1 1 134 3.5E-19 T 23-04-2016 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 SUPERFAMILY SSF51998 827 895 8.85E-178 T 23-04-2016 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 SUPERFAMILY SSF51998 357 796 8.85E-178 T 23-04-2016 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 SUPERFAMILY SSF48168 142 356 2.75E-59 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 Gene3D G3DSA:3.20.70.20 269 479 8.4E-86 T 23-04-2016 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 Gene3D G3DSA:3.20.70.20 534 691 8.4E-86 T 23-04-2016 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 Gene3D G3DSA:3.20.70.20 747 792 8.4E-86 T 23-04-2016 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 Gene3D G3DSA:3.20.70.20 853 894 8.4E-86 T 23-04-2016 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 284 895 1.8E-218 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 281 354 1.3E-23 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 Pfam PF02867 Ribonucleotide reductase, barrel domain 358 892 1.1E-184 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 PANTHER PTHR11573 140 895 0.0 T 23-04-2016 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 736 758 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 PRINTS PR01183 Ribonucleotide reductase large chain signature 671 694 3.0E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 PRINTS PR01183 Ribonucleotide reductase large chain signature 643 665 3.0E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 452 3.0E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 PRINTS PR01183 Ribonucleotide reductase large chain signature 568 579 3.0E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 PRINTS PR01183 Ribonucleotide reductase large chain signature 747 774 3.0E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 PRINTS PR01183 Ribonucleotide reductase large chain signature 605 628 3.0E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 Pfam PF03477 ATP cone domain 22 118 4.4E-17 T 23-04-2016 IPR005144 ATP-cone domain CYCME_RS08205 fb882e10c0d2675a06a768ed1500a6b0 930 Pfam PF03477 ATP cone domain 136 220 5.3E-5 T 23-04-2016 IPR005144 ATP-cone domain CYCME_RS02380 ee4e63096030801602e10da4a96f2d86 165 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 165 33.996 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CYCME_RS02380 ee4e63096030801602e10da4a96f2d86 165 Gene3D G3DSA:3.40.30.10 2 165 5.6E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02380 ee4e63096030801602e10da4a96f2d86 165 PANTHER PTHR10681:SF81 3 165 3.7E-41 T 23-04-2016 CYCME_RS02380 ee4e63096030801602e10da4a96f2d86 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CYCME_RS02380 ee4e63096030801602e10da4a96f2d86 165 Pfam PF08534 Redoxin 20 162 1.2E-27 T 23-04-2016 IPR013740 Redoxin GO:0016491 CYCME_RS02380 ee4e63096030801602e10da4a96f2d86 165 SUPERFAMILY SSF52833 1 163 2.2E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02380 ee4e63096030801602e10da4a96f2d86 165 PANTHER PTHR10681 3 165 3.7E-41 T 23-04-2016 CYCME_RS09240 c39087c12ff45e5ac4f8b13f6b844861 379 PANTHER PTHR23083 41 300 3.5E-19 T 23-04-2016 CYCME_RS09240 c39087c12ff45e5ac4f8b13f6b844861 379 SUPERFAMILY SSF81901 38 254 7.85E-14 T 23-04-2016 CYCME_RS09240 c39087c12ff45e5ac4f8b13f6b844861 379 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 378 32.993 T 23-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CYCME_RS09240 c39087c12ff45e5ac4f8b13f6b844861 379 Gene3D G3DSA:1.25.40.10 36 307 8.7E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS02650 7d0ca57b99d720322b1aacecf2300596 308 SUPERFAMILY SSF54593 2 273 3.22E-36 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS02650 7d0ca57b99d720322b1aacecf2300596 308 Gene3D G3DSA:3.10.180.10 138 290 6.5E-35 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS02650 7d0ca57b99d720322b1aacecf2300596 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 117 4.7E-13 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS02650 7d0ca57b99d720322b1aacecf2300596 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 138 254 8.4E-22 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYCME_RS02650 7d0ca57b99d720322b1aacecf2300596 308 Gene3D G3DSA:3.10.180.10 2 130 8.9E-29 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS10630 17cbf477a5db6a114a10c7e0f809293f 302 Gene3D G3DSA:3.60.15.10 1 302 2.3E-108 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10630 17cbf477a5db6a114a10c7e0f809293f 302 Pfam PF12706 Beta-lactamase superfamily domain 50 269 3.0E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10630 17cbf477a5db6a114a10c7e0f809293f 302 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 302 3.7E-122 T 23-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 CYCME_RS10630 17cbf477a5db6a114a10c7e0f809293f 302 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 302 147.487 T 23-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 CYCME_RS10630 17cbf477a5db6a114a10c7e0f809293f 302 SUPERFAMILY SSF56281 1 302 1.17E-54 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 SMART SM00322 60 125 8.8E-6 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 Pfam PF07650 KH domain 40 111 2.7E-17 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.5E-40 T 23-04-2016 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 PANTHER PTHR11760:SF19 2 213 2.3E-130 T 23-04-2016 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 Gene3D G3DSA:3.30.300.20 17 107 2.2E-31 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.219 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 SUPERFAMILY SSF54821 108 206 7.59E-40 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.5E-93 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 PANTHER PTHR11760 2 213 2.3E-130 T 23-04-2016 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 SUPERFAMILY SSF54814 2 106 1.75E-34 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CYCME_RS03685 a39d586621c7575825276f44b1440d18 225 Gene3D G3DSA:3.30.1140.32 108 207 7.2E-46 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CYCME_RS00420 22f4965a7d4bb449dea871d4a3fd4851 631 Pfam PF05170 AsmA family 266 520 3.1E-29 T 23-04-2016 IPR007844 AsmA CYCME_RS00420 22f4965a7d4bb449dea871d4a3fd4851 631 Pfam PF05170 AsmA family 4 210 1.1E-38 T 23-04-2016 IPR007844 AsmA CYCME_RS00420 22f4965a7d4bb449dea871d4a3fd4851 631 PANTHER PTHR30441 1 631 3.3E-81 T 23-04-2016 CYCME_RS00420 22f4965a7d4bb449dea871d4a3fd4851 631 PANTHER PTHR30441:SF4 1 631 3.3E-81 T 23-04-2016 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 Gene3D G3DSA:1.10.1660.10 41 96 1.4E-15 T 23-04-2016 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 SUPERFAMILY SSF46955 41 142 4.03E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 53 66 2.4E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 53 2.4E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 77 97 2.4E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 PANTHER PTHR30204:SF1 33 151 3.9E-14 T 23-04-2016 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 Gene3D G3DSA:1.10.1660.10 97 150 2.0E-7 T 23-04-2016 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 Pfam PF13411 MerR HTH family regulatory protein 42 109 9.1E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 SMART SM00422 41 110 5.1E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS01035 5481f8a56285e63c8b0d9c693606c73b 159 PANTHER PTHR30204 33 151 3.9E-14 T 23-04-2016 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 Gene3D G3DSA:1.10.1660.10 41 96 1.4E-15 T 23-04-2016 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 SUPERFAMILY SSF46955 41 142 4.03E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 53 66 2.4E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 53 2.4E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 77 97 2.4E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 PANTHER PTHR30204:SF1 33 151 3.9E-14 T 23-04-2016 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 Gene3D G3DSA:1.10.1660.10 97 150 2.0E-7 T 23-04-2016 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 Pfam PF13411 MerR HTH family regulatory protein 42 109 9.1E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 SMART SM00422 41 110 5.1E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS12245 5481f8a56285e63c8b0d9c693606c73b 159 PANTHER PTHR30204 33 151 3.9E-14 T 23-04-2016 CYCME_RS03135 7f95fffa598b203fb1b8af9a5c1b5f32 292 Pfam PF01040 UbiA prenyltransferase family 27 272 4.1E-59 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CYCME_RS03135 7f95fffa598b203fb1b8af9a5c1b5f32 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 65 87 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site CYCME_RS03135 7f95fffa598b203fb1b8af9a5c1b5f32 292 PANTHER PTHR11048 11 290 2.4E-76 T 23-04-2016 CYCME_RS03135 7f95fffa598b203fb1b8af9a5c1b5f32 292 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 10 291 19.81 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 CYCME_RS03135 7f95fffa598b203fb1b8af9a5c1b5f32 292 PANTHER PTHR11048:SF3 11 290 2.4E-76 T 23-04-2016 CYCME_RS03135 7f95fffa598b203fb1b8af9a5c1b5f32 292 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 12 290 2.4E-95 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 CYCME_RS00230 dc34ef7cc90f9d6bf1585bdf5c7b1798 515 SUPERFAMILY SSF103473 22 226 5.23E-29 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS00230 dc34ef7cc90f9d6bf1585bdf5c7b1798 515 SUPERFAMILY SSF103473 308 510 5.23E-29 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS00230 dc34ef7cc90f9d6bf1585bdf5c7b1798 515 Gene3D G3DSA:1.20.1250.20 20 222 1.2E-11 T 23-04-2016 CYCME_RS00230 dc34ef7cc90f9d6bf1585bdf5c7b1798 515 Gene3D G3DSA:1.20.1250.20 330 510 1.5E-11 T 23-04-2016 CYCME_RS00230 dc34ef7cc90f9d6bf1585bdf5c7b1798 515 PANTHER PTHR12778 297 507 2.8E-77 T 23-04-2016 CYCME_RS00230 dc34ef7cc90f9d6bf1585bdf5c7b1798 515 PANTHER PTHR12778 19 221 2.8E-77 T 23-04-2016 CYCME_RS00230 dc34ef7cc90f9d6bf1585bdf5c7b1798 515 Pfam PF07690 Major Facilitator Superfamily 29 315 6.0E-11 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 Gene3D G3DSA:1.10.340.30 22 122 2.7E-44 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 SUPERFAMILY SSF55811 220 345 2.97E-18 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 SMART SM00478 39 190 1.9E-47 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 Gene3D G3DSA:3.90.79.10 230 347 2.5E-20 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 PANTHER PTHR10359 12 313 6.7E-98 T 23-04-2016 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.3E-7 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 165 2.2E-18 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 Pfam PF14815 NUDIX domain 235 343 3.0E-19 T 23-04-2016 IPR029119 MutY, C-terminal CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 SUPERFAMILY SSF48150 5 225 5.65E-76 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 276 9.6E-112 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CYCME_RS00425 ccd9bc22502b638a2c0ef6ab8deb7920 349 Gene3D G3DSA:1.10.1670.10 123 224 5.9E-40 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CYCME_RS05570 1f1a240a190e3377787bc70db6f77af4 323 TIGRFAM TIGR03187 DGQHR: DGQHR domain 12 239 2.5E-46 T 23-04-2016 IPR017601 DGQHR-containing domain CYCME_RS05570 1f1a240a190e3377787bc70db6f77af4 323 Pfam PF14072 DNA-sulfur modification-associated 13 175 4.5E-20 T 23-04-2016 IPR017642 DNA sulphur modification protein DndB CYCME_RS03185 a60eaa258d2a3cb5dfba82d16a650527 85 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYCME_RS03185 a60eaa258d2a3cb5dfba82d16a650527 85 PANTHER PTHR24960:SF38 1 84 1.7E-27 T 23-04-2016 CYCME_RS03185 a60eaa258d2a3cb5dfba82d16a650527 85 Gene3D G3DSA:3.30.70.20 4 73 9.6E-19 T 23-04-2016 CYCME_RS03185 a60eaa258d2a3cb5dfba82d16a650527 85 PANTHER PTHR24960 1 84 1.7E-27 T 23-04-2016 CYCME_RS03185 a60eaa258d2a3cb5dfba82d16a650527 85 Pfam PF00037 4Fe-4S binding domain 4 24 3.7E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYCME_RS03185 a60eaa258d2a3cb5dfba82d16a650527 85 SUPERFAMILY SSF54862 4 68 6.12E-19 T 23-04-2016 CYCME_RS11800 f5a80a93c02b3b2b1fb6e9e043512f40 97 PANTHER PTHR36965 2 94 3.3E-26 T 23-04-2016 CYCME_RS11800 f5a80a93c02b3b2b1fb6e9e043512f40 97 SUPERFAMILY SSF111148 1 79 3.01E-25 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CYCME_RS11800 f5a80a93c02b3b2b1fb6e9e043512f40 97 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 2.0E-16 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CYCME_RS11800 f5a80a93c02b3b2b1fb6e9e043512f40 97 Pfam PF04362 Bacterial Fe(2+) trafficking 1 79 6.7E-26 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CYCME_RS11800 f5a80a93c02b3b2b1fb6e9e043512f40 97 Gene3D G3DSA:1.10.3880.10 1 84 1.3E-25 T 23-04-2016 CYCME_RS11800 f5a80a93c02b3b2b1fb6e9e043512f40 97 PANTHER PTHR36965:SF1 2 94 3.3E-26 T 23-04-2016 CYCME_RS07640 907139cf5829f694b0c7f9b1f53067cb 392 Pfam PF02684 Lipid-A-disaccharide synthetase 12 372 8.1E-106 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CYCME_RS07640 907139cf5829f694b0c7f9b1f53067cb 392 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 7 379 3.3E-102 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CYCME_RS07640 907139cf5829f694b0c7f9b1f53067cb 392 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 9 387 36.809 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CYCME_RS07640 907139cf5829f694b0c7f9b1f53067cb 392 PANTHER PTHR30372:SF0 7 389 2.4E-108 T 23-04-2016 CYCME_RS07640 907139cf5829f694b0c7f9b1f53067cb 392 SUPERFAMILY SSF53756 11 309 6.28E-29 T 23-04-2016 CYCME_RS07640 907139cf5829f694b0c7f9b1f53067cb 392 Gene3D G3DSA:3.40.50.2000 166 294 6.1E-4 T 23-04-2016 CYCME_RS07640 907139cf5829f694b0c7f9b1f53067cb 392 PANTHER PTHR30372 7 389 2.4E-108 T 23-04-2016 CYCME_RS01605 81f667dad9cfe6fc45ef70c606c02da0 158 PANTHER PTHR38692 2 158 1.7E-45 T 23-04-2016 CYCME_RS01605 81f667dad9cfe6fc45ef70c606c02da0 158 Pfam PF04361 Protein of unknown function (DUF494) 5 158 1.7E-48 T 23-04-2016 IPR007456 Smg CYCME_RS01605 81f667dad9cfe6fc45ef70c606c02da0 158 PANTHER PTHR38692:SF1 2 158 1.7E-45 T 23-04-2016 CYCME_RS01605 81f667dad9cfe6fc45ef70c606c02da0 158 Hamap MF_00598 Protein Smg [smg]. 5 158 25.375 T 23-04-2016 IPR007456 Smg CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 Pfam PF00561 alpha/beta hydrolase fold 28 175 4.6E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 PRINTS PR00412 Epoxide hydrolase signature 55 70 1.0E-4 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 PRINTS PR00412 Epoxide hydrolase signature 248 270 1.0E-4 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 PANTHER PTHR10992 6 273 1.4E-54 T 23-04-2016 CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 3.0E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 3.0E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 3.0E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 3.0E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 SUPERFAMILY SSF53474 4 273 5.36E-61 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS07955 78d8d1ccea2f143ab1306c77d3de3ec6 274 Gene3D G3DSA:3.40.50.1820 3 273 9.0E-64 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS03820 7c3976b69f175a142d773d6e25396429 234 SMART SM00382 29 213 4.7E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS03820 7c3976b69f175a142d773d6e25396429 234 Pfam PF00005 ABC transporter 24 165 1.2E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS03820 7c3976b69f175a142d773d6e25396429 234 PANTHER PTHR24220 6 212 3.5E-60 T 23-04-2016 CYCME_RS03820 7c3976b69f175a142d773d6e25396429 234 SUPERFAMILY SSF52540 4 215 3.88E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03820 7c3976b69f175a142d773d6e25396429 234 Gene3D G3DSA:3.40.50.300 2 213 3.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05255 a70e765090ae57838968d6fcd9036398 694 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 184 258 2.7E-23 T 23-04-2016 IPR020012 Motility protein FimV, N-terminal CYCME_RS05255 a70e765090ae57838968d6fcd9036398 694 Gene3D G3DSA:1.25.40.10 497 576 2.7E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS05255 a70e765090ae57838968d6fcd9036398 694 Gene3D G3DSA:1.25.40.10 650 681 2.7E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS05255 a70e765090ae57838968d6fcd9036398 694 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 410 435 0.0019 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain CYCME_RS05255 a70e765090ae57838968d6fcd9036398 694 SUPERFAMILY SSF48452 653 681 1.93E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS05255 a70e765090ae57838968d6fcd9036398 694 SUPERFAMILY SSF48452 499 564 1.93E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS05255 a70e765090ae57838968d6fcd9036398 694 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 655 694 2.7E-11 T 23-04-2016 IPR020011 Motility protein FimV, C-terminal CYCME_RS12820 40018665bb23780e064d84153a9b22ff 319 PANTHER PTHR10108:SF779 52 197 4.3E-22 T 23-04-2016 CYCME_RS12820 40018665bb23780e064d84153a9b22ff 319 PANTHER PTHR10108 52 197 4.3E-22 T 23-04-2016 CYCME_RS12820 40018665bb23780e064d84153a9b22ff 319 Pfam PF08241 Methyltransferase domain 101 195 4.4E-22 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CYCME_RS12820 40018665bb23780e064d84153a9b22ff 319 Gene3D G3DSA:3.40.50.150 88 214 9.2E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS12820 40018665bb23780e064d84153a9b22ff 319 SUPERFAMILY SSF53335 52 257 2.2E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02765 e1ef3781bc4e980ab22fe98739386fcc 77 Gene3D G3DSA:3.10.20.30 1 77 7.6E-22 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS02765 e1ef3781bc4e980ab22fe98739386fcc 77 Pfam PF02597 ThiS family 5 77 9.5E-16 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CYCME_RS02765 e1ef3781bc4e980ab22fe98739386fcc 77 SUPERFAMILY SSF54285 3 77 1.87E-17 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CYCME_RS02765 e1ef3781bc4e980ab22fe98739386fcc 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 77 5.7E-21 T 23-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 CYCME_RS02765 e1ef3781bc4e980ab22fe98739386fcc 77 PANTHER PTHR33359 1 77 3.3E-21 T 23-04-2016 CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 295 3.0E-117 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 88 1.2E-19 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 Pfam PF00589 Phage integrase family 112 282 1.4E-49 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 3 296 59.679 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 Gene3D G3DSA:1.10.150.130 5 97 5.9E-26 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 Gene3D G3DSA:1.10.443.10 112 288 1.8E-59 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 31.885 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 PANTHER PTHR30349 4 295 2.1E-114 T 23-04-2016 CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 SUPERFAMILY SSF56349 5 287 1.38E-57 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS08365 d1487c51095720e1970aada6b3860134 296 PANTHER PTHR30349:SF5 4 295 2.1E-114 T 23-04-2016 CYCME_RS12085 30f4d5d4db2c56b1bcc68d9810ae2e1a 244 PANTHER PTHR15362 9 147 1.5E-34 T 23-04-2016 CYCME_RS12085 30f4d5d4db2c56b1bcc68d9810ae2e1a 244 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 55 77 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CYCME_RS12085 30f4d5d4db2c56b1bcc68d9810ae2e1a 244 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 20 181 2.4E-40 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CYCME_RS12085 30f4d5d4db2c56b1bcc68d9810ae2e1a 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 14 77 6.8E-15 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CYCME_RS01320 20b460453fcf20793b55940632e84689 98 SUPERFAMILY SSF160191 6 89 5.23E-29 T 23-04-2016 CYCME_RS01320 20b460453fcf20793b55940632e84689 98 Hamap MF_01866 Protein YcgL [ycgL]. 7 96 22.191 T 23-04-2016 IPR027354 YcgL domain CYCME_RS01320 20b460453fcf20793b55940632e84689 98 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 9 87 1.0E-18 T 23-04-2016 IPR027354 YcgL domain CYCME_RS01320 20b460453fcf20793b55940632e84689 98 Pfam PF05166 YcgL domain 9 81 1.0E-28 T 23-04-2016 IPR027354 YcgL domain CYCME_RS01320 20b460453fcf20793b55940632e84689 98 PANTHER PTHR38109 9 88 8.0E-24 T 23-04-2016 CYCME_RS09765 7817c9f0d23656ac084e128e338ec9ab 168 PANTHER PTHR30383:SF5 4 162 5.6E-40 T 23-04-2016 CYCME_RS09765 7817c9f0d23656ac084e128e338ec9ab 168 PANTHER PTHR30383 4 162 5.6E-40 T 23-04-2016 CYCME_RS09765 7817c9f0d23656ac084e128e338ec9ab 168 Gene3D G3DSA:3.40.50.1110 4 166 1.3E-49 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CYCME_RS09765 7817c9f0d23656ac084e128e338ec9ab 168 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 149 4.4E-19 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CYCME_RS09765 7817c9f0d23656ac084e128e338ec9ab 168 SUPERFAMILY SSF52266 3 164 1.98E-43 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CYCME_RS12075 bcc8976a7d28f8ba86feb42aa280d953 166 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 27 156 2.7E-40 T 23-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 CYCME_RS12075 bcc8976a7d28f8ba86feb42aa280d953 166 Gene3D G3DSA:3.40.630.30 19 161 8.3E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS12075 bcc8976a7d28f8ba86feb42aa280d953 166 PANTHER PTHR23091 19 161 1.6E-31 T 23-04-2016 CYCME_RS12075 bcc8976a7d28f8ba86feb42aa280d953 166 Pfam PF00583 Acetyltransferase (GNAT) family 62 136 2.5E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CYCME_RS12075 bcc8976a7d28f8ba86feb42aa280d953 166 PANTHER PTHR23091:SF247 19 161 1.6E-31 T 23-04-2016 CYCME_RS12075 bcc8976a7d28f8ba86feb42aa280d953 166 SUPERFAMILY SSF55729 19 161 7.86E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CYCME_RS10550 b56c915a9490a9e6e42d3b6cc87ce416 143 PANTHER PTHR30558:SF7 1 143 8.6E-51 T 23-04-2016 CYCME_RS10550 b56c915a9490a9e6e42d3b6cc87ce416 143 PANTHER PTHR30558 1 143 8.6E-51 T 23-04-2016 CYCME_RS10550 b56c915a9490a9e6e42d3b6cc87ce416 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 141 3.5E-29 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CYCME_RS10550 b56c915a9490a9e6e42d3b6cc87ce416 143 TIGRFAM TIGR02801 tolR: protein TolR 14 140 4.2E-45 T 23-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CYCME_RS04030 d30d985ddcd3d7d5678cabf7914e4379 242 PANTHER PTHR24220 1 238 5.9E-147 T 23-04-2016 CYCME_RS04030 d30d985ddcd3d7d5678cabf7914e4379 242 PANTHER PTHR24220:SF368 1 238 5.9E-147 T 23-04-2016 CYCME_RS04030 d30d985ddcd3d7d5678cabf7914e4379 242 Gene3D G3DSA:3.40.50.300 1 216 2.0E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04030 d30d985ddcd3d7d5678cabf7914e4379 242 SUPERFAMILY SSF52540 2 211 1.96E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04030 d30d985ddcd3d7d5678cabf7914e4379 242 SMART SM00382 5 194 7.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS04030 d30d985ddcd3d7d5678cabf7914e4379 242 ProSitePatterns PS00211 ABC transporters family signature. 117 131 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS04030 d30d985ddcd3d7d5678cabf7914e4379 242 Pfam PF00005 ABC transporter 2 144 1.5E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 Gene3D G3DSA:3.40.50.2000 241 336 9.9E-8 T 23-04-2016 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 PANTHER PTHR21015:SF22 3 352 1.5E-114 T 23-04-2016 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 SUPERFAMILY SSF53756 4 351 4.04E-116 T 23-04-2016 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 PANTHER PTHR21015 3 352 1.5E-114 T 23-04-2016 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 142 2.7E-38 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 347 2.2E-104 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 180 339 1.7E-41 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 352 36.397 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CYCME_RS11120 852fce911ebb304331ba3720081a824a 353 Gene3D G3DSA:3.40.50.2000 2 191 2.0E-67 T 23-04-2016 CYCME_RS03225 c427bee5b0e0a9009110a77906a344e0 449 Pfam PF09822 ABC-type uncharacterized transport system 40 243 1.1E-32 T 23-04-2016 IPR019196 ABC-type uncharacterised transport system CYCME_RS03225 c427bee5b0e0a9009110a77906a344e0 449 SUPERFAMILY SSF52317 352 396 6.41E-10 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS03225 c427bee5b0e0a9009110a77906a344e0 449 SUPERFAMILY SSF52317 154 322 6.41E-10 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS04025 658e36be1fbdcc6a60e27b80575d4f69 325 PANTHER PTHR10846 19 315 2.1E-62 T 23-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 CYCME_RS04025 658e36be1fbdcc6a60e27b80575d4f69 325 Pfam PF01699 Sodium/calcium exchanger protein 6 143 4.2E-28 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 CYCME_RS04025 658e36be1fbdcc6a60e27b80575d4f69 325 Pfam PF01699 Sodium/calcium exchanger protein 178 315 2.2E-29 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 CYCME_RS04025 658e36be1fbdcc6a60e27b80575d4f69 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 6 314 5.2E-80 T 23-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 SUPERFAMILY SSF52467 1 233 1.79E-73 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 Gene3D G3DSA:3.30.1600.10 21 60 9.0E-26 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 Gene3D G3DSA:3.30.1600.10 113 157 9.0E-26 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 5 232 56.561 T 23-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 PANTHER PTHR11085:SF17 1 233 2.1E-83 T 23-04-2016 CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 PANTHER PTHR11085 1 233 2.1E-83 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 Pfam PF02146 Sir2 family 12 185 2.2E-53 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 Gene3D G3DSA:3.40.50.1220 70 112 1.9E-44 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 Gene3D G3DSA:3.40.50.1220 164 229 1.9E-44 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS01915 06602753004cd6cd5d33f0d1441b10c7 234 Gene3D G3DSA:3.40.50.1220 1 20 1.9E-44 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CYCME_RS03765 72c72a9fd512f7780f53040bac0d7abf 128 SUPERFAMILY SSF53137 13 128 4.58E-49 T 23-04-2016 CYCME_RS03765 72c72a9fd512f7780f53040bac0d7abf 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 7.8E-57 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03765 72c72a9fd512f7780f53040bac0d7abf 128 PIRSF PIRSF002131 1 128 1.6E-53 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03765 72c72a9fd512f7780f53040bac0d7abf 128 Gene3D G3DSA:3.30.420.80 6 128 2.2E-55 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03765 72c72a9fd512f7780f53040bac0d7abf 128 PANTHER PTHR11759 10 128 2.2E-72 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03765 72c72a9fd512f7780f53040bac0d7abf 128 Pfam PF00411 Ribosomal protein S11 18 127 8.1E-51 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03765 72c72a9fd512f7780f53040bac0d7abf 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 33.184 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CYCME_RS11380 4fd47560ddae378c2d06165118dd478a 321 PANTHER PTHR30458 1 256 8.7E-31 T 23-04-2016 CYCME_RS11380 4fd47560ddae378c2d06165118dd478a 321 Gene3D G3DSA:1.20.1260.10 32 259 3.2E-50 T 23-04-2016 IPR012347 Ferritin-related CYCME_RS11380 4fd47560ddae378c2d06165118dd478a 321 SUPERFAMILY SSF47240 42 258 4.19E-49 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS11380 4fd47560ddae378c2d06165118dd478a 321 Pfam PF05138 Phenylacetic acid catabolic protein 32 269 6.4E-51 T 23-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 CYCME_RS07740 a5810ae0febbc3bf800ffe134df3eedd 898 SUPERFAMILY SSF52540 214 565 1.29E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07740 a5810ae0febbc3bf800ffe134df3eedd 898 Pfam PF12705 PD-(D/E)XK nuclease superfamily 615 885 2.7E-26 T 23-04-2016 CYCME_RS07740 a5810ae0febbc3bf800ffe134df3eedd 898 TIGRFAM TIGR03623 TIGR03623: probable DNA repair protein 13 886 3.7E-252 T 23-04-2016 IPR019925 DNA repair protein, predicted CYCME_RS10085 5b84716431af4cd015385a0852130ea4 133 Gene3D G3DSA:3.10.580.10 4 131 6.0E-32 T 23-04-2016 CYCME_RS10085 5b84716431af4cd015385a0852130ea4 133 Pfam PF00571 CBS domain 75 130 3.3E-14 T 23-04-2016 IPR000644 CBS domain CYCME_RS10085 5b84716431af4cd015385a0852130ea4 133 Pfam PF00571 CBS domain 7 60 5.9E-10 T 23-04-2016 IPR000644 CBS domain CYCME_RS10085 5b84716431af4cd015385a0852130ea4 133 PANTHER PTHR11911 1 133 1.4E-26 T 23-04-2016 CYCME_RS10085 5b84716431af4cd015385a0852130ea4 133 SMART SM00116 82 130 9.8E-9 T 23-04-2016 IPR000644 CBS domain CYCME_RS10085 5b84716431af4cd015385a0852130ea4 133 SMART SM00116 14 62 3.4E-6 T 23-04-2016 IPR000644 CBS domain CYCME_RS10085 5b84716431af4cd015385a0852130ea4 133 SUPERFAMILY SSF54631 2 129 6.95E-34 T 23-04-2016 CYCME_RS01390 a7936580a4768c895aa44e4964eac1e0 82 Gene3D G3DSA:1.10.720.30 19 77 2.5E-33 T 23-04-2016 IPR003034 SAP domain CYCME_RS01390 a7936580a4768c895aa44e4964eac1e0 82 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 12 73 1.2E-35 T 23-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 151 4.0E-33 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 PANTHER PTHR10192 4 166 6.7E-82 T 23-04-2016 CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 SMART SM00852 14 158 5.5E-26 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 SUPERFAMILY SSF53218 6 170 1.7E-45 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 PIRSF PIRSF006443 1 166 4.0E-62 T 23-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 PANTHER PTHR10192:SF18 4 166 6.7E-82 T 23-04-2016 CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 8.1E-82 T 23-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 Gene3D G3DSA:3.40.980.10 6 160 6.6E-47 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS02540 b92dc26af52b3c08cda0600524ca0284 174 Pfam PF00994 Probable molybdopterin binding domain 14 155 9.4E-33 T 23-04-2016 IPR001453 MoaB/Mog domain CYCME_RS10600 f24c8608ca1eff8174da4351f8baf5f1 251 Gene3D G3DSA:3.40.50.720 3 247 2.5E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS10600 f24c8608ca1eff8174da4351f8baf5f1 251 PANTHER PTHR10953 1 246 8.3E-96 T 23-04-2016 CYCME_RS10600 f24c8608ca1eff8174da4351f8baf5f1 251 SUPERFAMILY SSF69572 2 248 8.63E-88 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CYCME_RS10600 f24c8608ca1eff8174da4351f8baf5f1 251 PANTHER PTHR10953:SF158 1 246 8.3E-96 T 23-04-2016 CYCME_RS10600 f24c8608ca1eff8174da4351f8baf5f1 251 Pfam PF00899 ThiF family 9 244 6.1E-65 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 PANTHER PTHR30346:SF15 1 283 1.0E-102 T 23-04-2016 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 SUPERFAMILY SSF53850 88 289 1.32E-43 T 23-04-2016 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 Gene3D G3DSA:3.40.190.10 90 175 2.1E-16 T 23-04-2016 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 Gene3D G3DSA:1.10.10.10 1 78 4.6E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 Gene3D G3DSA:3.40.190.10 176 265 1.1E-29 T 23-04-2016 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 PANTHER PTHR30346 1 283 1.0E-102 T 23-04-2016 CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 Pfam PF03466 LysR substrate binding domain 88 287 1.8E-48 T 23-04-2016 IPR005119 LysR, substrate-binding CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 SUPERFAMILY SSF46785 1 83 7.79E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01735 57f9ea03c28f1061acc9998157e31b89 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.2E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CYCME_RS09495 8c7fc12189f5327445602a8b47d5d00a 1343 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1012 1340 1.2E-51 T 23-04-2016 IPR007452 Translocation and assembly module TamB CYCME_RS09495 8c7fc12189f5327445602a8b47d5d00a 1343 PANTHER PTHR36985 273 1343 1.1E-120 T 23-04-2016 CYCME_RS09495 8c7fc12189f5327445602a8b47d5d00a 1343 PANTHER PTHR36985 1 212 1.1E-120 T 23-04-2016 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 Gene3D G3DSA:3.30.1490.100 245 351 3.5E-25 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 Hamap MF_01113 DNA polymerase IV [dinB]. 5 362 37.554 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 Gene3D G3DSA:1.10.150.20 170 238 5.2E-21 T 23-04-2016 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 Pfam PF00817 impB/mucB/samB family 11 158 1.1E-50 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 PANTHER PTHR11076 2 352 4.2E-136 T 23-04-2016 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 SUPERFAMILY SSF100879 245 347 8.63E-22 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 Gene3D G3DSA:3.30.70.270 70 168 2.7E-32 T 23-04-2016 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 349 2.9E-13 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CYCME_RS07990 1b387f9368d46833f205a3bb5ed65729 365 SUPERFAMILY SSF56672 4 238 8.01E-89 T 23-04-2016 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 PANTHER PTHR30477 20 274 2.9E-93 T 23-04-2016 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 PRINTS PR00691 Adhesin B signature 24 45 4.5E-6 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 PRINTS PR00691 Adhesin B signature 68 87 4.5E-6 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 PRINTS PR00691 Adhesin B signature 191 208 4.5E-6 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 PRINTS PR00691 Adhesin B signature 49 67 4.5E-6 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 Gene3D G3DSA:3.40.50.1980 195 292 3.1E-9 T 23-04-2016 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 Gene3D G3DSA:3.40.50.1980 9 176 2.1E-29 T 23-04-2016 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 287 1.4E-32 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 PANTHER PTHR30477:SF11 20 274 2.9E-93 T 23-04-2016 CYCME_RS02405 44cd511b6bdb55fbbdafcd7b981071ae 299 SUPERFAMILY SSF53807 18 296 2.85E-60 T 23-04-2016 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 SUPERFAMILY SSF160544 244 350 1.83E-38 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.4E-119 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 PANTHER PTHR30531:SF4 1 361 4.2E-160 T 23-04-2016 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 Gene3D G3DSA:3.40.1690.10 217 356 6.9E-59 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 351 5.0E-121 T 23-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 PANTHER PTHR30531 1 361 4.2E-160 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.6E-34 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.6E-34 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.6E-34 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.6E-34 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS04545 f02ad297a7f3be1e640efd72831b5ce6 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.6E-34 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CYCME_RS02215 531433f611040897399d8a58f66444ee 138 Pfam PF05523 WxcM-like, C-terminal 5 132 1.7E-57 T 23-04-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 CYCME_RS02215 531433f611040897399d8a58f66444ee 138 SUPERFAMILY SSF51182 6 130 1.03E-43 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS05105 ae3c727f99c8344684de2b194160b592 691 Pfam PF00593 TonB dependent receptor 455 687 4.6E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS05105 ae3c727f99c8344684de2b194160b592 691 Gene3D G3DSA:2.170.130.10 49 162 1.4E-32 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS05105 ae3c727f99c8344684de2b194160b592 691 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 160 6.9E-25 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS05105 ae3c727f99c8344684de2b194160b592 691 Gene3D G3DSA:2.40.170.20 163 690 1.3E-76 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS05105 ae3c727f99c8344684de2b194160b592 691 PANTHER PTHR32552 42 690 8.6E-47 T 23-04-2016 CYCME_RS05105 ae3c727f99c8344684de2b194160b592 691 SUPERFAMILY SSF56935 44 690 4.03E-111 T 23-04-2016 CYCME_RS00440 26c7408b72f4308045c8a96cc7b960f4 192 PIRSF PIRSF029811 1 192 2.3E-64 T 23-04-2016 IPR027016 Uncharacterised protein with YceI domain CYCME_RS00440 26c7408b72f4308045c8a96cc7b960f4 192 Pfam PF04264 YceI-like domain 23 189 9.3E-16 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CYCME_RS00440 26c7408b72f4308045c8a96cc7b960f4 192 SMART SM00867 22 190 1.4E-13 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CYCME_RS00440 26c7408b72f4308045c8a96cc7b960f4 192 Gene3D G3DSA:2.40.128.110 21 190 8.7E-14 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CYCME_RS00440 26c7408b72f4308045c8a96cc7b960f4 192 SUPERFAMILY SSF101874 21 190 5.49E-22 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CYCME_RS05730 ce13749b9231aeda05f2932cda1262b2 422 Pfam PF02646 RmuC family 109 398 1.2E-96 T 23-04-2016 IPR003798 DNA recombination RmuC CYCME_RS05730 ce13749b9231aeda05f2932cda1262b2 422 PANTHER PTHR30563 1 422 9.6E-49 T 23-04-2016 CYCME_RS01255 866dc0585be586c3f60dba9f9ffa553c 269 Gene3D G3DSA:3.40.830.10 4 268 1.4E-94 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CYCME_RS01255 866dc0585be586c3f60dba9f9ffa553c 269 PANTHER PTHR30096:SF0 1 268 1.2E-98 T 23-04-2016 CYCME_RS01255 866dc0585be586c3f60dba9f9ffa553c 269 PANTHER PTHR30096 1 268 1.2E-98 T 23-04-2016 CYCME_RS01255 866dc0585be586c3f60dba9f9ffa553c 269 SUPERFAMILY SSF53213 6 268 5.36E-84 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CYCME_RS01255 866dc0585be586c3f60dba9f9ffa553c 269 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 251 1.7E-40 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CYCME_RS01255 866dc0585be586c3f60dba9f9ffa553c 269 PIRSF PIRSF006157 1 269 9.3E-88 T 23-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 CYCME_RS05055 99f61a9c167a42960a7b1afcb285a7a2 74 PIRSF PIRSF006488 1 72 2.4E-21 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CYCME_RS05055 99f61a9c167a42960a7b1afcb285a7a2 74 SUPERFAMILY SSF116842 3 65 1.44E-19 T 23-04-2016 CYCME_RS05055 99f61a9c167a42960a7b1afcb285a7a2 74 Pfam PF02609 Exonuclease VII small subunit 10 59 2.4E-19 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CYCME_RS05055 99f61a9c167a42960a7b1afcb285a7a2 74 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 63 4.4E-21 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CYCME_RS05055 99f61a9c167a42960a7b1afcb285a7a2 74 PANTHER PTHR34137 1 74 9.6E-18 T 23-04-2016 CYCME_RS05055 99f61a9c167a42960a7b1afcb285a7a2 74 Gene3D G3DSA:1.10.287.1040 3 66 3.5E-23 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CYCME_RS05055 99f61a9c167a42960a7b1afcb285a7a2 74 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 14.641 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CYCME_RS02325 a6ebaa0287a6f59a11d746ebf1b63a2c 114 PANTHER PTHR23407 1 112 4.4E-30 T 23-04-2016 CYCME_RS02325 a6ebaa0287a6f59a11d746ebf1b63a2c 114 SUPERFAMILY SSF100950 2 101 7.53E-30 T 23-04-2016 CYCME_RS02325 a6ebaa0287a6f59a11d746ebf1b63a2c 114 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 92 1.2E-26 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CYCME_RS02325 a6ebaa0287a6f59a11d746ebf1b63a2c 114 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 92 9.9E-22 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CYCME_RS02325 a6ebaa0287a6f59a11d746ebf1b63a2c 114 Gene3D G3DSA:3.40.50.10420 1 103 5.8E-30 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CYCME_RS02325 a6ebaa0287a6f59a11d746ebf1b63a2c 114 PANTHER PTHR23407:SF1 1 112 4.4E-30 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CYCME_RS01300 5bdbc932746d08d92184d50d18f4c4b0 240 PANTHER PTHR31040 47 237 1.2E-44 T 23-04-2016 CYCME_RS01300 5bdbc932746d08d92184d50d18f4c4b0 240 Pfam PF07298 NnrU protein 52 234 1.0E-7 T 23-04-2016 IPR009915 NnrU domain CYCME_RS02430 5f423e88f37384a7a6f3571c7455ccc8 73 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 7.3E-31 T 23-04-2016 IPR022069 Protein of unknown function DUF3622 CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 Gene3D G3DSA:3.30.70.260 303 387 2.1E-23 T 23-04-2016 CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 274 4.5E-37 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 SUPERFAMILY SSF55021 308 387 1.58E-14 T 23-04-2016 CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 PANTHER PTHR10996 1 348 1.8E-112 T 23-04-2016 CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 Gene3D G3DSA:3.40.50.720 20 92 4.7E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 PANTHER PTHR10996:SF121 1 348 1.8E-112 T 23-04-2016 CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 SUPERFAMILY SSF51735 86 275 3.52E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 SUPERFAMILY SSF52283 4 106 7.56E-18 T 23-04-2016 CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 Gene3D G3DSA:3.40.50.720 93 275 1.8E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS09285 71a7916e7ad9f40da96f8949ca2b89a4 387 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 306 5.9E-17 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CYCME_RS06530 e057de1c826711937caf309ae902a114 304 Gene3D G3DSA:1.20.1510.10 23 227 5.4E-52 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CYCME_RS06530 e057de1c826711937caf309ae902a114 304 Pfam PF01545 Cation efflux family 27 227 1.0E-36 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS06530 e057de1c826711937caf309ae902a114 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 300 4.2E-64 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS06530 e057de1c826711937caf309ae902a114 304 PANTHER PTHR11562:SF40 7 301 4.8E-117 T 23-04-2016 CYCME_RS06530 e057de1c826711937caf309ae902a114 304 PANTHER PTHR11562 7 301 4.8E-117 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS06530 e057de1c826711937caf309ae902a114 304 SUPERFAMILY SSF161111 20 228 2.75E-51 T 23-04-2016 CYCME_RS09320 ac19c5d8ef7d3884844d802c2005c25e 129 PIRSF PIRSF027377 1 124 8.8E-53 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS09320 ac19c5d8ef7d3884844d802c2005c25e 129 Gene3D G3DSA:3.30.1130.10 4 123 3.6E-46 T 23-04-2016 CYCME_RS09320 ac19c5d8ef7d3884844d802c2005c25e 129 PANTHER PTHR34354:SF1 8 129 6.0E-49 T 23-04-2016 CYCME_RS09320 ac19c5d8ef7d3884844d802c2005c25e 129 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 129 50.234 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS09320 ac19c5d8ef7d3884844d802c2005c25e 129 PANTHER PTHR34354 8 129 6.0E-49 T 23-04-2016 CYCME_RS09320 ac19c5d8ef7d3884844d802c2005c25e 129 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 8 117 1.4E-51 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS09320 ac19c5d8ef7d3884844d802c2005c25e 129 SUPERFAMILY SSF55620 4 111 3.93E-26 T 23-04-2016 CYCME_RS09320 ac19c5d8ef7d3884844d802c2005c25e 129 Pfam PF14489 QueF-like protein 40 119 1.0E-32 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CYCME_RS03825 4aadf363a21ee32338498f524d167915 233 PANTHER PTHR30183:SF4 1 232 1.4E-95 T 23-04-2016 CYCME_RS03825 4aadf363a21ee32338498f524d167915 233 Gene3D G3DSA:1.10.3720.10 17 229 5.4E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS03825 4aadf363a21ee32338498f524d167915 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 220 4.9E-7 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS03825 4aadf363a21ee32338498f524d167915 233 PANTHER PTHR30183 1 232 1.4E-95 T 23-04-2016 CYCME_RS03825 4aadf363a21ee32338498f524d167915 233 SUPERFAMILY SSF161098 19 222 2.75E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS11300 a635486197485e171f9c6ac317de849f 368 SUPERFAMILY SSF53659 1 362 4.22E-102 T 23-04-2016 CYCME_RS11300 a635486197485e171f9c6ac317de849f 368 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 358 7.7E-106 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CYCME_RS11300 a635486197485e171f9c6ac317de849f 368 SMART SM01329 5 358 1.4E-142 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CYCME_RS11300 a635486197485e171f9c6ac317de849f 368 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CYCME_RS11300 a635486197485e171f9c6ac317de849f 368 Gene3D G3DSA:3.40.718.10 1 364 5.2E-107 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CYCME_RS11300 a635486197485e171f9c6ac317de849f 368 PANTHER PTHR11835:SF35 1 365 1.3E-132 T 23-04-2016 CYCME_RS11300 a635486197485e171f9c6ac317de849f 368 PANTHER PTHR11835 1 365 1.3E-132 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CYCME_RS11300 a635486197485e171f9c6ac317de849f 368 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 344 6.3E-107 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 CYCME_RS05240 e6dcfeee7dee1a0ab285b2724a2fc546 102 Gene3D G3DSA:1.20.58.380 8 52 5.0E-5 T 23-04-2016 CYCME_RS05240 e6dcfeee7dee1a0ab285b2724a2fc546 102 Pfam PF05400 Flagellar protein FliT 19 98 1.8E-14 T 23-04-2016 IPR008622 Flagellar protein FliT CYCME_RS00800 92d11ddbe86a56b1149a242eb1a16f07 213 PANTHER PTHR36118 4 212 8.2E-59 T 23-04-2016 CYCME_RS00800 92d11ddbe86a56b1149a242eb1a16f07 213 PANTHER PTHR36118:SF1 4 212 8.2E-59 T 23-04-2016 CYCME_RS00800 92d11ddbe86a56b1149a242eb1a16f07 213 Pfam PF04205 FMN-binding domain 104 193 1.8E-18 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CYCME_RS00800 92d11ddbe86a56b1149a242eb1a16f07 213 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 5 198 25.468 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CYCME_RS00800 92d11ddbe86a56b1149a242eb1a16f07 213 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 13 197 8.3E-59 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CYCME_RS00800 92d11ddbe86a56b1149a242eb1a16f07 213 SMART SM00900 104 196 4.8E-34 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CYCME_RS00800 92d11ddbe86a56b1149a242eb1a16f07 213 PIRSF PIRSF006091 1 209 1.0E-71 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CYCME_RS11150 7e187f0f9c3c150bef93f5953b0aac26 579 Gene3D G3DSA:3.90.1310.10 138 236 3.9E-30 T 23-04-2016 CYCME_RS11150 7e187f0f9c3c150bef93f5953b0aac26 579 Gene3D G3DSA:3.40.710.10 237 560 6.7E-86 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS11150 7e187f0f9c3c150bef93f5953b0aac26 579 PANTHER PTHR30627 8 567 2.0E-191 T 23-04-2016 CYCME_RS11150 7e187f0f9c3c150bef93f5953b0aac26 579 SUPERFAMILY SSF56519 63 229 4.58E-40 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CYCME_RS11150 7e187f0f9c3c150bef93f5953b0aac26 579 SUPERFAMILY SSF56601 231 563 5.98E-90 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CYCME_RS11150 7e187f0f9c3c150bef93f5953b0aac26 579 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 551 8.5E-72 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CYCME_RS11150 7e187f0f9c3c150bef93f5953b0aac26 579 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 213 9.8E-16 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CYCME_RS11150 7e187f0f9c3c150bef93f5953b0aac26 579 PANTHER PTHR30627:SF1 8 567 2.0E-191 T 23-04-2016 CYCME_RS11345 37f34b252b8dc71db97a2d00fd8a4a0b 97 Gene3D G3DSA:3.30.70.900 2 94 1.7E-14 T 23-04-2016 CYCME_RS11345 37f34b252b8dc71db97a2d00fd8a4a0b 97 SUPERFAMILY SSF54909 3 95 2.99E-14 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CYCME_RS11345 37f34b252b8dc71db97a2d00fd8a4a0b 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 66 1.9E-9 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 Pfam PF00375 Sodium:dicarboxylate symporter family 3 409 1.2E-127 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 200 219 5.0E-60 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 5.0E-60 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 235 254 5.0E-60 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 5.0E-60 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 5.0E-60 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 5.0E-60 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 152 174 5.0E-60 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 5.0E-60 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 Gene3D G3DSA:1.10.3860.10 2 414 6.0E-135 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 SUPERFAMILY SSF118215 3 411 2.35E-115 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS08055 3ad501249447975fa205d689b95a20de 420 PANTHER PTHR11958 3 414 2.3E-149 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CYCME_RS06860 770c6bec7dc57e86793cf4abcfe9bcd7 292 Pfam PF00535 Glycosyl transferase family 2 2 123 2.5E-10 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS06860 770c6bec7dc57e86793cf4abcfe9bcd7 292 Gene3D G3DSA:3.90.550.10 2 155 1.6E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06860 770c6bec7dc57e86793cf4abcfe9bcd7 292 SUPERFAMILY SSF53448 2 209 2.53E-28 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06860 770c6bec7dc57e86793cf4abcfe9bcd7 292 PANTHER PTHR22916 2 182 4.7E-16 T 23-04-2016 CYCME_RS06750 7b2d7ae4aec00a2ec6299ea26ed50fed 607 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 145 1.8E-29 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS06750 7b2d7ae4aec00a2ec6299ea26ed50fed 607 Gene3D G3DSA:2.40.170.20 152 604 9.7E-83 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS06750 7b2d7ae4aec00a2ec6299ea26ed50fed 607 SUPERFAMILY SSF56935 26 603 4.95E-116 T 23-04-2016 CYCME_RS06750 7b2d7ae4aec00a2ec6299ea26ed50fed 607 Gene3D G3DSA:2.170.130.10 26 151 4.6E-38 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CYCME_RS06750 7b2d7ae4aec00a2ec6299ea26ed50fed 607 Pfam PF00593 TonB dependent receptor 386 604 2.3E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CYCME_RS06750 7b2d7ae4aec00a2ec6299ea26ed50fed 607 PANTHER PTHR32552 26 605 1.8E-61 T 23-04-2016 CYCME_RS09805 8078143e94c2f56c26e0071495c07cf5 69 PANTHER PTHR39324:SF1 1 69 1.1E-21 T 23-04-2016 CYCME_RS09805 8078143e94c2f56c26e0071495c07cf5 69 PANTHER PTHR39324 1 69 1.1E-21 T 23-04-2016 CYCME_RS09805 8078143e94c2f56c26e0071495c07cf5 69 Gene3D G3DSA:3.30.1660.10 2 69 2.2E-34 T 23-04-2016 IPR025543 Dodecin-like CYCME_RS09805 8078143e94c2f56c26e0071495c07cf5 69 SUPERFAMILY SSF89807 3 68 3.92E-25 T 23-04-2016 IPR009923 Dodecin CYCME_RS09805 8078143e94c2f56c26e0071495c07cf5 69 Pfam PF07311 Dodecin 5 68 4.8E-30 T 23-04-2016 IPR009923 Dodecin CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 PANTHER PTHR11935 24 131 1.9E-43 T 23-04-2016 CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 PANTHER PTHR11935 154 262 1.9E-43 T 23-04-2016 CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 Gene3D G3DSA:3.60.15.10 19 116 2.4E-46 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 Gene3D G3DSA:3.60.15.10 158 272 2.4E-46 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 PANTHER PTHR11935:SF109 24 131 1.9E-43 T 23-04-2016 CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 PANTHER PTHR11935:SF109 154 262 1.9E-43 T 23-04-2016 CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 SUPERFAMILY SSF56281 12 329 2.88E-59 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 SMART SM00849 37 253 3.4E-25 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS06055 50be13e87d9b22ae1d0af5a7791f7f7f 338 Pfam PF00753 Metallo-beta-lactamase superfamily 36 253 1.7E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 454 464 4.21E-17 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 671 689 4.21E-17 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 581 591 4.21E-17 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 546 570 4.21E-17 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 694 708 4.21E-17 T 23-04-2016 IPR001775 GspD/PilQ family CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 282 707 1.8E-154 T 23-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 Pfam PF07660 Secretin and TonB N terminus short domain 308 355 4.4E-10 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 SMART SM00965 307 355 1.8E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 PANTHER PTHR30604 166 713 8.2E-114 T 23-04-2016 CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 Pfam PF00263 Bacterial type II and III secretion system protein 550 707 1.5E-45 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 Pfam PF11741 AMIN domain 52 134 2.6E-10 T 23-04-2016 IPR021731 AMIN domain CYCME_RS00300 85e544fd42cd480317e9d0408ee5a733 713 Pfam PF03958 Bacterial type II/III secretion system short domain 381 454 7.3E-14 T 23-04-2016 IPR005644 NolW-like CYCME_RS07090 3600ebcd5684841be6b1e161136f3343 634 SMART SM00710 355 380 510.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CYCME_RS07090 3600ebcd5684841be6b1e161136f3343 634 SMART SM00710 296 319 2500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CYCME_RS07090 3600ebcd5684841be6b1e161136f3343 634 SMART SM00710 265 292 1500.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CYCME_RS07090 3600ebcd5684841be6b1e161136f3343 634 SMART SM00710 176 197 250.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CYCME_RS07090 3600ebcd5684841be6b1e161136f3343 634 SMART SM00710 332 354 2400.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CYCME_RS07090 3600ebcd5684841be6b1e161136f3343 634 SMART SM00710 388 412 300.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CYCME_RS07090 3600ebcd5684841be6b1e161136f3343 634 SMART SM00710 231 259 29.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CYCME_RS07090 3600ebcd5684841be6b1e161136f3343 634 SUPERFAMILY SSF51126 45 430 1.33E-18 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor CYCME_RS07070 950092ea844f1ff08faa7f3f1f6a8871 299 Gene3D G3DSA:3.90.550.10 4 232 2.0E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07070 950092ea844f1ff08faa7f3f1f6a8871 299 PANTHER PTHR22916 3 238 5.9E-55 T 23-04-2016 CYCME_RS07070 950092ea844f1ff08faa7f3f1f6a8871 299 Pfam PF00535 Glycosyl transferase family 2 7 119 1.5E-29 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS07070 950092ea844f1ff08faa7f3f1f6a8871 299 SUPERFAMILY SSF53448 4 223 1.22E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 Pfam PF13662 Toprim domain 82 171 2.3E-23 T 23-04-2016 IPR006171 Toprim domain CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 PANTHER PTHR30446 1 198 2.0E-107 T 23-04-2016 CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 SUPERFAMILY SSF111304 3 198 1.44E-74 T 23-04-2016 IPR023627 Recombination protein RecR CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 SMART SM00493 80 165 6.3E-12 T 23-04-2016 IPR006171 Toprim domain CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 Pfam PF02132 RecR protein 42 78 4.5E-14 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 PANTHER PTHR30446:SF0 1 198 2.0E-107 T 23-04-2016 CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 3.2E-76 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CYCME_RS04405 e88a60a8636902cb40e9f21b65c66b7e 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 99.445 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CYCME_RS01890 cbae99f0d271fab548b697ade465dbd8 432 Gene3D G3DSA:1.10.3430.10 25 411 2.2E-137 T 23-04-2016 IPR029020 Ammonium/urea transporter CYCME_RS01890 cbae99f0d271fab548b697ade465dbd8 432 PANTHER PTHR11730 24 432 4.2E-181 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CYCME_RS01890 cbae99f0d271fab548b697ade465dbd8 432 Pfam PF00909 Ammonium Transporter Family 32 430 1.5E-119 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CYCME_RS01890 cbae99f0d271fab548b697ade465dbd8 432 TIGRFAM TIGR00836 amt: ammonium transporter 30 430 4.3E-136 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CYCME_RS01890 cbae99f0d271fab548b697ade465dbd8 432 PANTHER PTHR11730:SF17 24 432 4.2E-181 T 23-04-2016 CYCME_RS01890 cbae99f0d271fab548b697ade465dbd8 432 SUPERFAMILY SSF111352 26 406 1.15E-129 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CYCME_RS01890 cbae99f0d271fab548b697ade465dbd8 432 ProSitePatterns PS01219 Ammonium transporters signature. 181 206 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CYCME_RS07780 bd94085ec6af04ad0b68302c1d4ece1c 577 PANTHER PTHR40940 12 576 1.2E-57 T 23-04-2016 CYCME_RS07780 bd94085ec6af04ad0b68302c1d4ece1c 577 PANTHER PTHR40940:SF1 12 576 1.2E-57 T 23-04-2016 CYCME_RS07780 bd94085ec6af04ad0b68302c1d4ece1c 577 Pfam PF13584 Oxygen tolerance 33 493 1.1E-116 T 23-04-2016 IPR025738 Aerotolerance-related protein BatD CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 355 1.0E-124 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 SUPERFAMILY SSF103025 3 278 2.2E-91 T 23-04-2016 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 SUPERFAMILY SSF101790 273 359 6.87E-23 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 Gene3D G3DSA:2.40.30.110 279 359 7.7E-24 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 PIRSF PIRSF006487 1 362 2.3E-86 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 PANTHER PTHR13847:SF5 1 354 1.9E-56 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 356 43.489 T 23-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 Gene3D G3DSA:3.30.70.1400 54 137 1.7E-33 T 23-04-2016 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 1.2E-88 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 PANTHER PTHR13847 1 354 1.9E-56 T 23-04-2016 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 Gene3D G3DSA:3.30.1360.120 144 231 1.3E-50 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 Gene3D G3DSA:3.30.1360.120 2 53 1.3E-50 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CYCME_RS02365 cfc2e927ad4ec36c455b7d5c98f4c868 363 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 350 2.8E-18 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CYCME_RS09715 4ddfabfd53d3b322ba6ba720147096e9 109 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site CYCME_RS09715 4ddfabfd53d3b322ba6ba720147096e9 109 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 3.5E-35 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 CYCME_RS09715 4ddfabfd53d3b322ba6ba720147096e9 109 PANTHER PTHR10072 1 108 1.9E-44 T 23-04-2016 CYCME_RS09715 4ddfabfd53d3b322ba6ba720147096e9 109 PANTHER PTHR10072:SF48 1 108 1.9E-44 T 23-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 CYCME_RS09715 4ddfabfd53d3b322ba6ba720147096e9 109 SUPERFAMILY SSF89360 1 96 1.05E-30 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS09715 4ddfabfd53d3b322ba6ba720147096e9 109 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.5E-47 T 23-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 CYCME_RS09715 4ddfabfd53d3b322ba6ba720147096e9 109 Gene3D G3DSA:2.60.300.12 2 96 1.1E-32 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS09715 4ddfabfd53d3b322ba6ba720147096e9 109 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 6.6E-24 T 23-04-2016 IPR000361 FeS cluster biogenesis CYCME_RS00135 cdbbea41840350c59aaa6b8098ae8a19 180 Pfam PF13511 Domain of unknown function (DUF4124) 25 68 7.2E-7 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 CYCME_RS00570 fe7cf8d9b1fb6566bb25cdc3cda20aae 391 SUPERFAMILY SSF103473 3 385 1.2E-53 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS00570 fe7cf8d9b1fb6566bb25cdc3cda20aae 391 Gene3D G3DSA:1.20.1250.20 14 190 3.2E-23 T 23-04-2016 CYCME_RS00570 fe7cf8d9b1fb6566bb25cdc3cda20aae 391 Gene3D G3DSA:1.20.1250.20 208 381 1.5E-13 T 23-04-2016 CYCME_RS00570 fe7cf8d9b1fb6566bb25cdc3cda20aae 391 Pfam PF07690 Major Facilitator Superfamily 16 325 2.1E-33 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CYCME_RS00570 fe7cf8d9b1fb6566bb25cdc3cda20aae 391 PANTHER PTHR23501 16 390 6.2E-26 T 23-04-2016 CYCME_RS01630 fc98be43036821b0f971f664ea522622 221 Gene3D G3DSA:3.10.450.50 117 173 1.6E-21 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS01630 fc98be43036821b0f971f664ea522622 221 Gene3D G3DSA:3.10.450.50 30 73 1.6E-21 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS01630 fc98be43036821b0f971f664ea522622 221 Gene3D G3DSA:1.10.10.640 174 205 8.1E-27 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical CYCME_RS01630 fc98be43036821b0f971f664ea522622 221 Gene3D G3DSA:1.10.10.640 74 114 8.1E-27 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical CYCME_RS01630 fc98be43036821b0f971f664ea522622 221 PIRSF PIRSF004649 1 211 9.2E-51 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CYCME_RS01630 fc98be43036821b0f971f664ea522622 221 Pfam PF05494 MlaC protein 37 200 1.5E-51 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CYCME_RS01630 fc98be43036821b0f971f664ea522622 221 PANTHER PTHR36573 1 214 5.1E-49 T 23-04-2016 CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 Gene3D G3DSA:3.40.50.300 1 280 7.1E-132 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 PANTHER PTHR11550 1 538 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.528 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 SUPERFAMILY SSF52317 288 538 3.36E-85 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 5.6E-248 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 SUPERFAMILY SSF52540 1 267 1.22E-121 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 Gene3D G3DSA:3.40.50.880 287 540 2.7E-94 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 Pfam PF00117 Glutamine amidotransferase class-I 301 533 1.1E-59 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CYCME_RS07615 1053d01281d70398fbe1133ca33ac6b9 548 Pfam PF06418 CTP synthase N-terminus 3 265 1.4E-126 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CYCME_RS02415 71b098ed5461380851de3af0b84c054e 112 Gene3D G3DSA:2.30.30.40 43 112 8.4E-37 T 23-04-2016 CYCME_RS02415 71b098ed5461380851de3af0b84c054e 112 Gene3D G3DSA:2.20.25.10 1 41 2.9E-22 T 23-04-2016 CYCME_RS02415 71b098ed5461380851de3af0b84c054e 112 SUPERFAMILY SSF57783 4 37 1.28E-14 T 23-04-2016 CYCME_RS02415 71b098ed5461380851de3af0b84c054e 112 Pfam PF03831 PhnA domain 45 112 1.7E-32 T 23-04-2016 IPR013988 PhnA protein, C-terminal CYCME_RS02415 71b098ed5461380851de3af0b84c054e 112 PANTHER PTHR30305 2 112 5.8E-82 T 23-04-2016 CYCME_RS02415 71b098ed5461380851de3af0b84c054e 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 3.0E-54 T 23-04-2016 IPR004624 PhnA protein CYCME_RS02415 71b098ed5461380851de3af0b84c054e 112 SUPERFAMILY SSF82057 40 112 1.46E-28 T 23-04-2016 CYCME_RS02415 71b098ed5461380851de3af0b84c054e 112 Pfam PF08274 PhnA Zinc-Ribbon 3 32 3.5E-17 T 23-04-2016 IPR013987 PhnA protein, N-terminal CYCME_RS04790 1d6c12c4ca562b515e4afef823c4ca6b 439 PANTHER PTHR30469 78 438 2.0E-21 T 23-04-2016 CYCME_RS04790 1d6c12c4ca562b515e4afef823c4ca6b 439 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 96 382 8.2E-29 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS04790 1d6c12c4ca562b515e4afef823c4ca6b 439 PANTHER PTHR30469:SF15 78 438 2.0E-21 T 23-04-2016 CYCME_RS04790 1d6c12c4ca562b515e4afef823c4ca6b 439 Gene3D G3DSA:2.40.50.100 120 154 1.9E-9 T 23-04-2016 CYCME_RS04790 1d6c12c4ca562b515e4afef823c4ca6b 439 Gene3D G3DSA:2.40.50.100 232 263 1.9E-9 T 23-04-2016 CYCME_RS04790 1d6c12c4ca562b515e4afef823c4ca6b 439 SUPERFAMILY SSF111369 110 350 2.09E-17 T 23-04-2016 CYCME_RS04790 1d6c12c4ca562b515e4afef823c4ca6b 439 Pfam PF13437 HlyD family secretion protein 235 344 3.2E-5 T 23-04-2016 CYCME_RS01500 284b318d052000d721b672287e307942 105 PANTHER PTHR21256 3 105 1.8E-44 T 23-04-2016 CYCME_RS01500 284b318d052000d721b672287e307942 105 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 5 91 6.9E-19 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CYCME_RS01500 284b318d052000d721b672287e307942 105 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 22.393 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CYCME_RS01500 284b318d052000d721b672287e307942 105 SUPERFAMILY SSF101386 3 92 6.17E-28 T 23-04-2016 CYCME_RS01500 284b318d052000d721b672287e307942 105 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 88 1.3E-34 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CYCME_RS07500 334b7991c3ff305ab012c3352469c113 250 PANTHER PTHR24220 3 248 4.0E-130 T 23-04-2016 CYCME_RS07500 334b7991c3ff305ab012c3352469c113 250 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.8E-109 T 23-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 CYCME_RS07500 334b7991c3ff305ab012c3352469c113 250 PANTHER PTHR24220:SF85 3 248 4.0E-130 T 23-04-2016 CYCME_RS07500 334b7991c3ff305ab012c3352469c113 250 Pfam PF00005 ABC transporter 17 172 2.0E-18 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS07500 334b7991c3ff305ab012c3352469c113 250 Gene3D G3DSA:3.40.50.300 1 241 1.0E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07500 334b7991c3ff305ab012c3352469c113 250 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS07500 334b7991c3ff305ab012c3352469c113 250 SUPERFAMILY SSF52540 2 232 1.69E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 PANTHER PTHR24322 172 204 1.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 PANTHER PTHR24322 24 156 1.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 9.9E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 9.9E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 Gene3D G3DSA:3.40.50.720 14 244 5.0E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 SUPERFAMILY SSF51735 15 222 1.65E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 PANTHER PTHR24322:SF337 172 204 1.2E-41 T 23-04-2016 CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 PANTHER PTHR24322:SF337 24 156 1.2E-41 T 23-04-2016 CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS05725 11f54950fda5c2b1aba353f9e7f9d8af 250 Pfam PF00106 short chain dehydrogenase 21 213 9.6E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS06405 e7d77416c14a1e9da82c1b56e2cc916c 410 SUPERFAMILY SSF56935 74 410 1.26E-19 T 23-04-2016 CYCME_RS06405 e7d77416c14a1e9da82c1b56e2cc916c 410 Gene3D G3DSA:2.40.160.10 82 399 1.6E-16 T 23-04-2016 IPR023614 Porin domain CYCME_RS08295 7cad0a9586430093687303e6c45cdba2 139 Hamap MF_01255 L-ectoine synthase [ectC]. 1 129 35.755 T 23-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 CYCME_RS08295 7cad0a9586430093687303e6c45cdba2 139 Pfam PF06339 Ectoine synthase 1 128 5.0E-59 T 23-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 CYCME_RS08295 7cad0a9586430093687303e6c45cdba2 139 PANTHER PTHR39289:SF1 1 139 6.1E-45 T 23-04-2016 CYCME_RS08295 7cad0a9586430093687303e6c45cdba2 139 Gene3D G3DSA:2.60.120.10 21 112 5.1E-15 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS08295 7cad0a9586430093687303e6c45cdba2 139 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 122 8.0E-59 T 23-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 CYCME_RS08295 7cad0a9586430093687303e6c45cdba2 139 PANTHER PTHR39289 1 139 6.1E-45 T 23-04-2016 CYCME_RS08295 7cad0a9586430093687303e6c45cdba2 139 SUPERFAMILY SSF51182 1 129 8.34E-22 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS07945 896b00c8a3e915adfa3575b0d596767b 390 Pfam PF00355 Rieske [2Fe-2S] domain 33 112 9.7E-16 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07945 896b00c8a3e915adfa3575b0d596767b 390 Gene3D G3DSA:2.102.10.10 31 147 4.1E-23 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07945 896b00c8a3e915adfa3575b0d596767b 390 SUPERFAMILY SSF55961 149 386 1.1E-51 T 23-04-2016 CYCME_RS07945 896b00c8a3e915adfa3575b0d596767b 390 Pfam PF11723 Homotrimeric ring hydroxylase 141 385 5.0E-80 T 23-04-2016 IPR021028 Homotrimeric ring hydroxylase, catalytic domain KEGG: 00621+1.14.12.22|MetaCyc: PWY-6550 CYCME_RS07945 896b00c8a3e915adfa3575b0d596767b 390 PANTHER PTHR21266 30 213 3.9E-30 T 23-04-2016 CYCME_RS07945 896b00c8a3e915adfa3575b0d596767b 390 SUPERFAMILY SSF50022 27 144 4.84E-31 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS08935 92672658467f26c499eedcce3cd4f075 202 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 179 5.4E-83 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CYCME_RS08935 92672658467f26c499eedcce3cd4f075 202 PANTHER PTHR10422:SF23 19 159 4.7E-84 T 23-04-2016 CYCME_RS08935 92672658467f26c499eedcce3cd4f075 202 SUPERFAMILY SSF46626 13 192 1.51E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS08935 92672658467f26c499eedcce3cd4f075 202 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 178 1.4E-86 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CYCME_RS08935 92672658467f26c499eedcce3cd4f075 202 PANTHER PTHR10422 19 159 4.7E-84 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CYCME_RS08935 92672658467f26c499eedcce3cd4f075 202 Gene3D G3DSA:1.10.760.10 14 195 6.5E-34 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS09085 a442e5310c097e423589c44358489d62 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 9 140 1.5E-24 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CYCME_RS09085 a442e5310c097e423589c44358489d62 149 PANTHER PTHR38786 5 140 1.1E-17 T 23-04-2016 CYCME_RS09085 a442e5310c097e423589c44358489d62 149 Pfam PF02050 Flagellar FliJ protein 24 141 4.2E-23 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CYCME_RS08690 e7108f06d1c2568a09b535dd69b7b404 247 PANTHER PTHR30134:SF2 15 241 2.5E-114 T 23-04-2016 CYCME_RS08690 e7108f06d1c2568a09b535dd69b7b404 247 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 61 221 2.8E-34 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CYCME_RS08690 e7108f06d1c2568a09b535dd69b7b404 247 SUPERFAMILY SSF52540 29 240 3.77E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08690 e7108f06d1c2568a09b535dd69b7b404 247 Gene3D G3DSA:3.40.50.300 185 227 5.3E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08690 e7108f06d1c2568a09b535dd69b7b404 247 Gene3D G3DSA:3.40.50.300 67 146 4.1E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08690 e7108f06d1c2568a09b535dd69b7b404 247 PIRSF PIRSF005624 26 246 6.8E-93 T 23-04-2016 CYCME_RS08690 e7108f06d1c2568a09b535dd69b7b404 247 PANTHER PTHR30134 15 241 2.5E-114 T 23-04-2016 CYCME_RS08690 e7108f06d1c2568a09b535dd69b7b404 247 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 31 242 6.4E-89 T 23-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CYCME_RS03370 03e45229161883e8e9a505f9cff303b3 272 SUPERFAMILY SSF56112 47 199 6.56E-10 T 23-04-2016 IPR011009 Protein kinase-like domain CYCME_RS03370 03e45229161883e8e9a505f9cff303b3 272 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 75 241 5.9E-13 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 CYCME_RS03370 03e45229161883e8e9a505f9cff303b3 272 Gene3D G3DSA:1.10.510.10 157 202 1.3E-5 T 23-04-2016 CYCME_RS03370 03e45229161883e8e9a505f9cff303b3 272 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 174 186 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CYCME_RS04040 d0c1deeb72b40ddcd2f7a9e8e48b04da 154 Pfam PF02470 MlaD protein 40 118 2.4E-22 T 23-04-2016 IPR003399 Mce/MlaD CYCME_RS04040 d0c1deeb72b40ddcd2f7a9e8e48b04da 154 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 149 1.3E-56 T 23-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CYCME_RS04040 d0c1deeb72b40ddcd2f7a9e8e48b04da 154 PANTHER PTHR33371 1 148 9.6E-35 T 23-04-2016 CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 SUPERFAMILY SSF52540 1 215 1.16E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 6.0E-20 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 Gene3D G3DSA:3.40.50.300 432 523 3.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 Gene3D G3DSA:3.40.50.300 376 399 3.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 SUPERFAMILY SSF52540 2 50 6.79E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 SUPERFAMILY SSF52540 296 511 6.79E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 PIRSF PIRSF003128 1 556 5.4E-150 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 5.1E-148 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 PANTHER PTHR11059 2 555 1.4E-145 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CYCME_RS04915 2b0a40d345a61bf333e3fa8b60fd3423 556 Gene3D G3DSA:3.40.50.300 1 202 1.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02235 61e3bd086c9eddaa1685acb97ce59ccf 270 SUPERFAMILY SSF52540 8 255 4.18E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02235 61e3bd086c9eddaa1685acb97ce59ccf 270 Pfam PF13469 Sulfotransferase family 9 212 8.6E-21 T 23-04-2016 CYCME_RS02235 61e3bd086c9eddaa1685acb97ce59ccf 270 Gene3D G3DSA:3.40.50.300 93 253 1.7E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02235 61e3bd086c9eddaa1685acb97ce59ccf 270 Gene3D G3DSA:3.40.50.300 8 28 1.7E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02870 3c86e6df17350b145d76dd8e9f51fb9b 284 PANTHER PTHR42194 4 273 5.1E-115 T 23-04-2016 CYCME_RS02870 3c86e6df17350b145d76dd8e9f51fb9b 284 Pfam PF05114 Protein of unknown function (DUF692) 9 270 6.3E-101 T 23-04-2016 IPR007801 Uncharacterised protein family UPF0276 CYCME_RS02870 3c86e6df17350b145d76dd8e9f51fb9b 284 SUPERFAMILY SSF51658 30 260 6.01E-14 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CYCME_RS02870 3c86e6df17350b145d76dd8e9f51fb9b 284 Hamap MF_00697 UPF0276 protein . 10 278 44.065 T 23-04-2016 IPR007801 Uncharacterised protein family UPF0276 CYCME_RS02870 3c86e6df17350b145d76dd8e9f51fb9b 284 PANTHER PTHR42194:SF1 4 273 5.1E-115 T 23-04-2016 CYCME_RS02870 3c86e6df17350b145d76dd8e9f51fb9b 284 Gene3D G3DSA:3.20.20.150 7 276 1.8E-96 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 Gene3D G3DSA:3.40.50.980 17 175 3.2E-28 T 23-04-2016 CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 SUPERFAMILY SSF56801 16 523 2.09E-125 T 23-04-2016 CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 Gene3D G3DSA:2.30.38.10 336 418 1.1E-17 T 23-04-2016 CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 Gene3D G3DSA:3.40.50.980 176 323 1.8E-27 T 23-04-2016 CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 Gene3D G3DSA:3.30.300.30 419 521 9.3E-29 T 23-04-2016 CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 170 181 - T 23-04-2016 IPR020845 AMP-binding, conserved site CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 511 4.4E-19 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 PANTHER PTHR24095 16 520 2.4E-122 T 23-04-2016 CYCME_RS11355 c73d73ba96b431161caf399336dc7fa4 540 Pfam PF00501 AMP-binding enzyme 19 424 3.2E-75 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CYCME_RS04195 fad9a87e9e661fd459aed615394f2d10 209 Pfam PF10677 Protein of unknown function (DUF2490) 39 175 9.5E-8 T 23-04-2016 IPR019619 Protein of unknown function DUF2490 CYCME_RS08190 27115d62161b04d6731cdcfce990a889 307 PANTHER PTHR11562:SF40 18 307 1.9E-140 T 23-04-2016 CYCME_RS08190 27115d62161b04d6731cdcfce990a889 307 Pfam PF01545 Cation efflux family 29 226 1.5E-40 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS08190 27115d62161b04d6731cdcfce990a889 307 Gene3D G3DSA:1.20.1510.10 23 226 4.2E-53 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CYCME_RS08190 27115d62161b04d6731cdcfce990a889 307 PANTHER PTHR11562 18 307 1.9E-140 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS08190 27115d62161b04d6731cdcfce990a889 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 300 2.1E-67 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS08190 27115d62161b04d6731cdcfce990a889 307 SUPERFAMILY SSF161111 19 227 2.22E-50 T 23-04-2016 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 Pfam PF00209 Sodium:neurotransmitter symporter family 156 447 7.5E-23 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 Pfam PF00209 Sodium:neurotransmitter symporter family 8 123 9.7E-28 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 SUPERFAMILY SSF161070 8 447 3.79E-132 T 23-04-2016 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 31 45 - T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 PANTHER PTHR11616:SF167 2 447 1.1E-153 T 23-04-2016 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 4.8E-17 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 4.8E-17 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 4.8E-17 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 4.8E-17 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CYCME_RS04865 aeca6fb40d22f38d6fba820d8bf9a67d 450 PANTHER PTHR11616 2 447 1.1E-153 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CYCME_RS05230 f65b5ff06778934cdedb5bc327cca798 460 PANTHER PTHR30288 1 453 5.7E-76 T 23-04-2016 CYCME_RS05230 f65b5ff06778934cdedb5bc327cca798 460 Pfam PF07196 Flagellin hook IN motif 125 179 2.7E-13 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CYCME_RS05230 f65b5ff06778934cdedb5bc327cca798 460 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 218 438 2.6E-49 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CYCME_RS05230 f65b5ff06778934cdedb5bc327cca798 460 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 1.9E-18 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CYCME_RS05230 f65b5ff06778934cdedb5bc327cca798 460 PANTHER PTHR30288:SF0 1 453 5.7E-76 T 23-04-2016 CYCME_RS10160 a56e0bcf54e727abebf562310b682bc4 171 Gene3D G3DSA:3.10.129.10 3 167 7.4E-61 T 23-04-2016 IPR029069 HotDog domain CYCME_RS10160 a56e0bcf54e727abebf562310b682bc4 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 51.872 T 23-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS10160 a56e0bcf54e727abebf562310b682bc4 171 SUPERFAMILY SSF54637 3 169 4.03E-59 T 23-04-2016 IPR029069 HotDog domain CYCME_RS10160 a56e0bcf54e727abebf562310b682bc4 171 Pfam PF07977 FabA-like domain 28 158 9.3E-53 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CYCME_RS10160 a56e0bcf54e727abebf562310b682bc4 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 1.6E-93 T 23-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CYCME_RS08235 a575d4f6694ea12a4c79acb2a3229b24 241 PANTHER PTHR24567 7 233 5.9E-24 T 23-04-2016 CYCME_RS08235 a575d4f6694ea12a4c79acb2a3229b24 241 SUPERFAMILY SSF51206 4 141 1.23E-12 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CYCME_RS08235 a575d4f6694ea12a4c79acb2a3229b24 241 SMART SM00419 168 216 5.9E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS08235 a575d4f6694ea12a4c79acb2a3229b24 241 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 1.1E-6 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CYCME_RS08235 a575d4f6694ea12a4c79acb2a3229b24 241 SUPERFAMILY SSF46785 144 238 8.47E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08235 a575d4f6694ea12a4c79acb2a3229b24 241 Gene3D G3DSA:2.60.120.10 26 124 1.2E-7 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS08235 a575d4f6694ea12a4c79acb2a3229b24 241 Gene3D G3DSA:1.10.10.10 145 222 1.2E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08235 a575d4f6694ea12a4c79acb2a3229b24 241 Pfam PF13545 Crp-like helix-turn-helix domain 148 221 1.5E-15 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CYCME_RS08395 6f82938323b688861308d3a677b0a530 275 PANTHER PTHR38034 9 273 1.4E-60 T 23-04-2016 CYCME_RS08395 6f82938323b688861308d3a677b0a530 275 Pfam PF01578 Cytochrome C assembly protein 76 271 7.5E-28 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CYCME_RS03915 bce13a5a3a47f90e07be19e74ab8b399 176 PANTHER PTHR38098 10 174 6.6E-25 T 23-04-2016 CYCME_RS03915 bce13a5a3a47f90e07be19e74ab8b399 176 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 15 171 20.95 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CYCME_RS03915 bce13a5a3a47f90e07be19e74ab8b399 176 Pfam PF04390 Lipopolysaccharide-assembly 20 165 3.2E-15 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CYCME_RS03915 bce13a5a3a47f90e07be19e74ab8b399 176 Gene3D G3DSA:3.30.160.150 28 172 4.7E-36 T 23-04-2016 CYCME_RS03915 bce13a5a3a47f90e07be19e74ab8b399 176 PANTHER PTHR38098:SF1 10 174 6.6E-25 T 23-04-2016 CYCME_RS07305 ebb50a72964ed79eeb374e7c65ce86f6 255 PANTHER PTHR17985 2 239 5.1E-61 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 CYCME_RS07305 ebb50a72964ed79eeb374e7c65ce86f6 255 PANTHER PTHR17985:SF8 2 239 5.1E-61 T 23-04-2016 CYCME_RS07305 ebb50a72964ed79eeb374e7c65ce86f6 255 Pfam PF05742 Transport and Golgi organisation 2 1 235 2.7E-57 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 CYCME_RS07040 7e5aef1389df2968b8953e1610e62641 335 SUPERFAMILY SSF51735 6 153 1.82E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07040 7e5aef1389df2968b8953e1610e62641 335 Gene3D G3DSA:3.40.50.720 8 186 6.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS07040 7e5aef1389df2968b8953e1610e62641 335 PANTHER PTHR22604 7 321 3.3E-34 T 23-04-2016 CYCME_RS07040 7e5aef1389df2968b8953e1610e62641 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 120 1.3E-20 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 CYCME_RS07985 22f19cb9e05b5932011899a57a23b849 97 Gene3D G3DSA:3.30.70.900 2 93 3.2E-12 T 23-04-2016 CYCME_RS07985 22f19cb9e05b5932011899a57a23b849 97 SUPERFAMILY SSF54909 4 93 2.72E-13 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CYCME_RS07985 22f19cb9e05b5932011899a57a23b849 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 67 1.8E-8 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain CYCME_RS01200 a2f04145c0283170b3e22fe7dcf41590 286 Pfam PF01040 UbiA prenyltransferase family 12 252 4.9E-24 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CYCME_RS01945 af0ae8a04f350affc8b632f2ee23f6fd 233 SUPERFAMILY SSF54001 59 139 8.83E-6 T 23-04-2016 CYCME_RS01945 af0ae8a04f350affc8b632f2ee23f6fd 233 PANTHER PTHR39327:SF1 49 232 9.2E-76 T 23-04-2016 CYCME_RS01945 af0ae8a04f350affc8b632f2ee23f6fd 233 PANTHER PTHR39327 49 232 9.2E-76 T 23-04-2016 CYCME_RS01945 af0ae8a04f350affc8b632f2ee23f6fd 233 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 79 182 7.7E-19 T 23-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 SUPERFAMILY SSF117457 315 489 1.83E-60 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 Gene3D G3DSA:3.20.130.10 302 489 5.5E-71 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 PANTHER PTHR30389:SF1 1 507 1.0E-299 T 23-04-2016 CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 PIRSF PIRSF001394 1 507 1.3E-210 T 23-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 285 6.0E-66 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 329 489 3.4E-43 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 PANTHER PTHR30389 1 507 1.0E-299 T 23-04-2016 CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 5.5E-102 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CYCME_RS05090 b8b32c4efb2c409efa774815302aa273 507 Pfam PF05683 Fumarase C-terminus 288 490 9.6E-82 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CYCME_RS05455 7aa8a1d61d3d3159ae6a5a0cb1d2d2b2 225 Gene3D G3DSA:3.90.470.20 12 109 1.2E-23 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CYCME_RS05455 7aa8a1d61d3d3159ae6a5a0cb1d2d2b2 225 SUPERFAMILY SSF56214 97 220 4.71E-22 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CYCME_RS05455 7aa8a1d61d3d3159ae6a5a0cb1d2d2b2 225 Gene3D G3DSA:3.90.470.20 110 201 3.8E-18 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CYCME_RS05455 7aa8a1d61d3d3159ae6a5a0cb1d2d2b2 225 PANTHER PTHR12215 1 177 2.4E-33 T 23-04-2016 CYCME_RS05455 7aa8a1d61d3d3159ae6a5a0cb1d2d2b2 225 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 98 170 1.4E-12 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CYCME_RS05455 7aa8a1d61d3d3159ae6a5a0cb1d2d2b2 225 SUPERFAMILY SSF56214 12 89 9.07E-18 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CYCME_RS05455 7aa8a1d61d3d3159ae6a5a0cb1d2d2b2 225 PANTHER PTHR12215:SF10 1 177 2.4E-33 T 23-04-2016 CYCME_RS02170 66c12f07bd39e462baae043470aa8938 292 PANTHER PTHR22572 2 288 2.7E-170 T 23-04-2016 CYCME_RS02170 66c12f07bd39e462baae043470aa8938 292 PANTHER PTHR22572:SF105 2 288 2.7E-170 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS02170 66c12f07bd39e462baae043470aa8938 292 SUPERFAMILY SSF53448 1 285 2.25E-92 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS02170 66c12f07bd39e462baae043470aa8938 292 Pfam PF00483 Nucleotidyl transferase 2 237 6.8E-68 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CYCME_RS02170 66c12f07bd39e462baae043470aa8938 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.4E-154 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS02170 66c12f07bd39e462baae043470aa8938 292 Gene3D G3DSA:3.90.550.10 1 265 8.0E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS01665 b78a4e7464425fa392235605d28937db 679 PANTHER PTHR11804:SF8 3 677 0.0 T 23-04-2016 CYCME_RS01665 b78a4e7464425fa392235605d28937db 679 Pfam PF01432 Peptidase family M3 222 676 6.5E-154 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 CYCME_RS01665 b78a4e7464425fa392235605d28937db 679 PANTHER PTHR11804 3 677 0.0 T 23-04-2016 CYCME_RS01665 b78a4e7464425fa392235605d28937db 679 Gene3D G3DSA:3.40.390.10 359 503 7.9E-59 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CYCME_RS01665 b78a4e7464425fa392235605d28937db 679 Gene3D G3DSA:1.10.1370.10 140 349 3.5E-137 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CYCME_RS01665 b78a4e7464425fa392235605d28937db 679 Gene3D G3DSA:1.10.1370.10 504 677 3.5E-137 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CYCME_RS01665 b78a4e7464425fa392235605d28937db 679 SUPERFAMILY SSF55486 1 676 1.88E-201 T 23-04-2016 CYCME_RS01665 b78a4e7464425fa392235605d28937db 679 Gene3D G3DSA:1.20.1050.40 11 138 1.1E-23 T 23-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CYCME_RS09640 0ba1ce8fe2be3a58b3efa59819983573 373 PANTHER PTHR30294 1 372 8.8E-236 T 23-04-2016 CYCME_RS09640 0ba1ce8fe2be3a58b3efa59819983573 373 PANTHER PTHR30294:SF22 1 372 8.8E-236 T 23-04-2016 CYCME_RS09640 0ba1ce8fe2be3a58b3efa59819983573 373 Pfam PF12698 ABC-2 family transporter protein 23 362 2.4E-31 T 23-04-2016 CYCME_RS10975 ca71d6a1db7f2c56c7f15690e81b13f5 236 Pfam PF08241 Methyltransferase domain 48 139 4.8E-20 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CYCME_RS10975 ca71d6a1db7f2c56c7f15690e81b13f5 236 PANTHER PTHR10108 34 200 7.7E-28 T 23-04-2016 CYCME_RS10975 ca71d6a1db7f2c56c7f15690e81b13f5 236 SUPERFAMILY SSF53335 8 201 1.49E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS10975 ca71d6a1db7f2c56c7f15690e81b13f5 236 Gene3D G3DSA:3.40.50.150 11 196 3.5E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 Pfam PF02355 Protein export membrane protein 108 290 2.8E-72 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 Gene3D G3DSA:1.20.1640.10 97 289 2.4E-31 T 23-04-2016 CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 Pfam PF07549 SecD/SecF GG Motif 32 54 1.7E-7 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 1.3E-31 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 1.3E-31 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 1.3E-31 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 PRINTS PR01755 Bacterial translocase SecF protein signature 36 51 1.3E-31 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 PANTHER PTHR30081 6 298 1.9E-81 T 23-04-2016 CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 280 4.7E-58 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 37 283 1.7E-86 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 9 294 29.731 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CYCME_RS05700 737d26914d6b76d268d0b433237d394e 311 SUPERFAMILY SSF82866 74 291 3.53E-43 T 23-04-2016 CYCME_RS04685 0d5b36d260d88d5a49426c5710e82b14 216 Pfam PF09361 Phasin protein 8 104 7.0E-17 T 23-04-2016 IPR018968 Phasin CYCME_RS02360 8ae1d48cb69c115fb5d0859c88674e15 78 Pfam PF06146 Phosphate-starvation-inducible E 7 71 2.0E-14 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like CYCME_RS02360 8ae1d48cb69c115fb5d0859c88674e15 78 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 75 5.5E-31 T 23-04-2016 IPR013468 Conserved hypothetical protein CHP02647 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 Gene3D G3DSA:3.30.70.1450 309 390 7.7E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 Gene3D G3DSA:3.30.70.1450 218 285 7.7E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 Pfam PF02080 TrkA-C domain 220 280 8.6E-7 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 PANTHER PTHR10283:SF100 353 592 2.4E-139 T 23-04-2016 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 PANTHER PTHR10283:SF100 6 229 2.4E-139 T 23-04-2016 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 SUPERFAMILY SSF116726 211 281 4.58E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 SUPERFAMILY SSF116726 306 387 1.7E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 PANTHER PTHR10283 353 592 2.4E-139 T 23-04-2016 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 PANTHER PTHR10283 6 229 2.4E-139 T 23-04-2016 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 Pfam PF03600 Citrate transporter 16 539 1.8E-48 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 CYCME_RS11835 eb461dad8e88ff3a9bab154904902090 592 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 540 556 - T 23-04-2016 IPR031312 Sodium/sulphate symporter, conserved site CYCME_RS01815 ef66e74540d25ec51bb77d3754c7c8f5 120 SMART SM00507 27 83 0.0014 T 23-04-2016 IPR003615 HNH nuclease CYCME_RS01815 ef66e74540d25ec51bb77d3754c7c8f5 120 Pfam PF01844 HNH endonuclease 40 88 1.9E-10 T 23-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CYCME_RS11770 4ec925728814f764b21a49b275054fe5 144 Pfam PF04519 Polymer-forming cytoskeletal 19 119 1.3E-21 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CYCME_RS11770 4ec925728814f764b21a49b275054fe5 144 PANTHER PTHR35024:SF2 15 118 1.5E-20 T 23-04-2016 CYCME_RS11770 4ec925728814f764b21a49b275054fe5 144 PANTHER PTHR35024 15 118 1.5E-20 T 23-04-2016 CYCME_RS11185 269bd3d8288c2f96bc7f1edf860cfcd8 470 PANTHER PTHR30365 1 457 2.2E-242 T 23-04-2016 CYCME_RS11185 269bd3d8288c2f96bc7f1edf860cfcd8 470 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 438 2.1E-161 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 CYCME_RS11185 269bd3d8288c2f96bc7f1edf860cfcd8 470 PANTHER PTHR30365:SF8 1 457 2.2E-242 T 23-04-2016 CYCME_RS11185 269bd3d8288c2f96bc7f1edf860cfcd8 470 PIRSF PIRSF006446 4 464 3.0E-194 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 PIRSF PIRSF006076 1 742 3.5E-234 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 Pfam PF01103 Surface antigen 432 739 1.5E-74 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 Gene3D G3DSA:2.40.160.50 395 739 4.2E-25 T 23-04-2016 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 Pfam PF07244 Surface antigen variable number repeat 160 247 1.8E-18 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 Pfam PF07244 Surface antigen variable number repeat 77 156 8.9E-11 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 Pfam PF07244 Surface antigen variable number repeat 331 405 1.7E-10 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 Pfam PF07244 Surface antigen variable number repeat 251 328 2.1E-7 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 PANTHER PTHR12815 1 740 3.3E-202 T 23-04-2016 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 742 23.811 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 10 740 2.7E-250 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CYCME_RS07665 fff5f3b213ec8c63e479e85ae428afa7 742 PANTHER PTHR12815:SF11 1 740 3.3E-202 T 23-04-2016 CYCME_RS00695 786e61194867d6d381362ffd49dc80c0 172 PANTHER PTHR30349:SF28 23 150 2.0E-41 T 23-04-2016 CYCME_RS00695 786e61194867d6d381362ffd49dc80c0 172 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 21 104 9.6E-26 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CYCME_RS00695 786e61194867d6d381362ffd49dc80c0 172 SUPERFAMILY SSF56349 21 149 3.88E-7 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS00695 786e61194867d6d381362ffd49dc80c0 172 Gene3D G3DSA:1.10.150.130 25 96 9.6E-5 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CYCME_RS00695 786e61194867d6d381362ffd49dc80c0 172 PANTHER PTHR30349 23 150 2.0E-41 T 23-04-2016 CYCME_RS10965 d4f7357be78ba21676c5f3414bdf64ca 292 Gene3D G3DSA:3.90.550.10 3 146 2.3E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS10965 d4f7357be78ba21676c5f3414bdf64ca 292 SUPERFAMILY SSF53448 3 240 7.88E-44 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS10965 d4f7357be78ba21676c5f3414bdf64ca 292 PANTHER PTHR10859 5 284 2.0E-58 T 23-04-2016 CYCME_RS10965 d4f7357be78ba21676c5f3414bdf64ca 292 Pfam PF00535 Glycosyl transferase family 2 9 162 5.7E-34 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS01475 2f6d1d91041a6919d8096a4d3378136f 136 SUPERFAMILY SSF53850 21 135 6.24E-12 T 23-04-2016 CYCME_RS01475 2f6d1d91041a6919d8096a4d3378136f 136 Gene3D G3DSA:3.40.190.10 21 136 3.6E-11 T 23-04-2016 CYCME_RS00765 5a295ca59803eff8608c6a49f33686d2 154 Pfam PF05433 Glycine zipper 2TM domain 61 100 1.9E-5 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 CYCME_RS00765 5a295ca59803eff8608c6a49f33686d2 154 PANTHER PTHR35603 25 147 6.5E-18 T 23-04-2016 CYCME_RS00765 5a295ca59803eff8608c6a49f33686d2 154 PANTHER PTHR35603:SF1 25 147 6.5E-18 T 23-04-2016 CYCME_RS00185 ad3d5e5ec1113dd7649c5bb6ff2139f3 388 PANTHER PTHR21666 1 381 7.3E-63 T 23-04-2016 CYCME_RS00185 ad3d5e5ec1113dd7649c5bb6ff2139f3 388 Pfam PF01551 Peptidase family M23 283 375 2.0E-24 T 23-04-2016 IPR016047 Peptidase M23 CYCME_RS00185 ad3d5e5ec1113dd7649c5bb6ff2139f3 388 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 33 239 0.002 T 23-04-2016 CYCME_RS00185 ad3d5e5ec1113dd7649c5bb6ff2139f3 388 Gene3D G3DSA:2.70.70.10 247 380 9.7E-36 T 23-04-2016 CYCME_RS00185 ad3d5e5ec1113dd7649c5bb6ff2139f3 388 SUPERFAMILY SSF51261 211 379 4.45E-45 T 23-04-2016 IPR011055 Duplicated hybrid motif CYCME_RS00185 ad3d5e5ec1113dd7649c5bb6ff2139f3 388 PANTHER PTHR21666:SF213 1 381 7.3E-63 T 23-04-2016 CYCME_RS03250 45d9f4ccd0856a63bfd44049934ded5b 287 Gene3D G3DSA:3.40.50.1820 6 277 3.2E-50 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS03250 45d9f4ccd0856a63bfd44049934ded5b 287 Pfam PF12697 Alpha/beta hydrolase family 30 268 5.0E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03250 45d9f4ccd0856a63bfd44049934ded5b 287 PANTHER PTHR10992 20 282 1.5E-37 T 23-04-2016 CYCME_RS03250 45d9f4ccd0856a63bfd44049934ded5b 287 SUPERFAMILY SSF53474 9 279 1.46E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS03250 45d9f4ccd0856a63bfd44049934ded5b 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 2.4E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03250 45d9f4ccd0856a63bfd44049934ded5b 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 226 240 2.4E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03250 45d9f4ccd0856a63bfd44049934ded5b 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 2.4E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03250 45d9f4ccd0856a63bfd44049934ded5b 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.4E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11310 7fc6d50f97013355d5d346265158d11a 204 Gene3D G3DSA:3.20.19.10 2 195 4.3E-43 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYCME_RS11310 7fc6d50f97013355d5d346265158d11a 204 PANTHER PTHR11670 1 200 2.0E-100 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11310 7fc6d50f97013355d5d346265158d11a 204 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 202 42.679 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11310 7fc6d50f97013355d5d346265158d11a 204 PANTHER PTHR11670:SF27 1 200 2.0E-100 T 23-04-2016 CYCME_RS11310 7fc6d50f97013355d5d346265158d11a 204 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 5.0E-80 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11310 7fc6d50f97013355d5d346265158d11a 204 Pfam PF00694 Aconitase C-terminal domain 1 122 1.0E-33 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CYCME_RS11310 7fc6d50f97013355d5d346265158d11a 204 SUPERFAMILY SSF52016 1 197 5.89E-58 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYCME_RS06225 f5060df37597b456e35109b0f32c7b50 478 PANTHER PTHR10283 9 478 2.2E-158 T 23-04-2016 CYCME_RS06225 f5060df37597b456e35109b0f32c7b50 478 PANTHER PTHR10283:SF91 9 478 2.2E-158 T 23-04-2016 CYCME_RS06225 f5060df37597b456e35109b0f32c7b50 478 Pfam PF03600 Citrate transporter 48 423 7.1E-64 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 CYCME_RS04005 8d23c39b80d38e5346ced01fda0f7bd2 167 Gene3D G3DSA:2.60.450.10 25 161 4.1E-33 T 23-04-2016 CYCME_RS04005 8d23c39b80d38e5346ced01fda0f7bd2 167 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 165 22.968 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CYCME_RS04005 8d23c39b80d38e5346ced01fda0f7bd2 167 Pfam PF03968 OstA-like protein 34 143 2.4E-28 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal CYCME_RS04005 8d23c39b80d38e5346ced01fda0f7bd2 167 PANTHER PTHR36504 1 167 2.3E-27 T 23-04-2016 CYCME_RS04005 8d23c39b80d38e5346ced01fda0f7bd2 167 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 24 164 2.1E-44 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CYCME_RS00415 7c76b02be5545908a97648d453d3a3ca 280 Gene3D G3DSA:1.10.3150.10 10 274 7.6E-37 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CYCME_RS00415 7c76b02be5545908a97648d453d3a3ca 280 PANTHER PTHR33525 8 228 1.9E-19 T 23-04-2016 CYCME_RS00415 7c76b02be5545908a97648d453d3a3ca 280 SUPERFAMILY SSF109604 10 272 2.95E-34 T 23-04-2016 CYCME_RS00415 7c76b02be5545908a97648d453d3a3ca 280 Pfam PF08668 HDOD domain 22 199 3.1E-24 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CYCME_RS06990 0e5be5c90c72bdb6ca2473c1d8f0a0d4 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 114 1.8E-22 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 CYCME_RS06990 0e5be5c90c72bdb6ca2473c1d8f0a0d4 347 SUPERFAMILY SSF51735 2 148 1.64E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06990 0e5be5c90c72bdb6ca2473c1d8f0a0d4 347 SUPERFAMILY SSF55347 124 251 5.89E-15 T 23-04-2016 CYCME_RS06990 0e5be5c90c72bdb6ca2473c1d8f0a0d4 347 Gene3D G3DSA:3.30.360.10 298 346 1.5E-23 T 23-04-2016 CYCME_RS06990 0e5be5c90c72bdb6ca2473c1d8f0a0d4 347 Gene3D G3DSA:3.30.360.10 135 247 1.5E-23 T 23-04-2016 CYCME_RS06990 0e5be5c90c72bdb6ca2473c1d8f0a0d4 347 Gene3D G3DSA:3.40.50.720 1 134 3.3E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06990 0e5be5c90c72bdb6ca2473c1d8f0a0d4 347 PANTHER PTHR22604 1 346 2.2E-56 T 23-04-2016 CYCME_RS08475 8e7aa812fbd10f09688d6175da59cf09 190 SUPERFAMILY SSF53271 14 184 1.06E-37 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS08475 8e7aa812fbd10f09688d6175da59cf09 190 Gene3D G3DSA:3.40.50.2020 6 183 6.4E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS08475 8e7aa812fbd10f09688d6175da59cf09 190 PANTHER PTHR22573 15 173 2.0E-37 T 23-04-2016 CYCME_RS08475 8e7aa812fbd10f09688d6175da59cf09 190 PANTHER PTHR22573:SF56 15 173 2.0E-37 T 23-04-2016 CYCME_RS08475 8e7aa812fbd10f09688d6175da59cf09 190 Pfam PF00156 Phosphoribosyl transferase domain 17 138 5.6E-18 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 Gene3D G3DSA:1.20.5.100 214 245 2.8E-8 T 23-04-2016 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 Gene3D G3DSA:1.10.760.10 19 210 3.9E-60 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 SUPERFAMILY SSF46626 19 159 8.58E-45 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 SUPERFAMILY SSF46626 186 209 8.58E-45 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 PANTHER PTHR10266:SF3 188 245 1.3E-51 T 23-04-2016 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 PANTHER PTHR10266:SF3 1 156 1.3E-51 T 23-04-2016 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 Pfam PF02167 Cytochrome C1 family 34 244 3.4E-16 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 PANTHER PTHR10266 188 245 1.3E-51 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 CYCME_RS04080 03b350cbde683b152910c8b098ece10a 245 PANTHER PTHR10266 1 156 1.3E-51 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 CYCME_RS05495 5af38b2e3bc60043103b414779bb00cc 223 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 219 1.8E-33 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CYCME_RS05495 5af38b2e3bc60043103b414779bb00cc 223 Gene3D G3DSA:3.20.20.190 1 221 1.4E-62 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CYCME_RS05495 5af38b2e3bc60043103b414779bb00cc 223 PANTHER PTHR23344 4 221 1.7E-56 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 CYCME_RS05495 5af38b2e3bc60043103b414779bb00cc 223 SUPERFAMILY SSF51695 1 222 1.52E-61 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CYCME_RS08910 ce8933bf78e6c3502b2c9a6b5e9ae8f1 204 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 1 192 1.2E-46 T 23-04-2016 CYCME_RS08910 ce8933bf78e6c3502b2c9a6b5e9ae8f1 204 PANTHER PTHR42208:SF1 1 199 1.2E-40 T 23-04-2016 CYCME_RS08910 ce8933bf78e6c3502b2c9a6b5e9ae8f1 204 PANTHER PTHR42208 1 199 1.2E-40 T 23-04-2016 CYCME_RS12805 9138252cb545e2b8b634147999e488ab 63 SUPERFAMILY SSF53448 2 60 2.03E-7 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS12805 9138252cb545e2b8b634147999e488ab 63 PANTHER PTHR22572:SF105 2 51 3.1E-14 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CYCME_RS12805 9138252cb545e2b8b634147999e488ab 63 PANTHER PTHR22572 2 51 3.1E-14 T 23-04-2016 CYCME_RS12260 9a27f0895136c5497fa74ce2fb44c21c 318 Pfam PF12762 ISXO2-like transposase domain 142 285 2.6E-16 T 23-04-2016 IPR024445 ISXO2-like transposase domain CYCME_RS12260 9a27f0895136c5497fa74ce2fb44c21c 318 SMART SM01126 139 293 3.7E-40 T 23-04-2016 IPR024445 ISXO2-like transposase domain CYCME_RS01020 9a27f0895136c5497fa74ce2fb44c21c 318 Pfam PF12762 ISXO2-like transposase domain 142 285 2.6E-16 T 23-04-2016 IPR024445 ISXO2-like transposase domain CYCME_RS01020 9a27f0895136c5497fa74ce2fb44c21c 318 SMART SM01126 139 293 3.7E-40 T 23-04-2016 IPR024445 ISXO2-like transposase domain CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 Pfam PF00005 ABC transporter 374 526 1.6E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 Pfam PF00005 ABC transporter 26 183 7.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 SUPERFAMILY SSF52540 5 254 6.63E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 SUPERFAMILY SSF52540 384 653 1.51E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 PANTHER PTHR24220 373 483 6.9E-160 T 23-04-2016 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 PANTHER PTHR24220 7 288 6.9E-160 T 23-04-2016 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 PANTHER PTHR24220:SF586 373 483 6.9E-160 T 23-04-2016 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 PANTHER PTHR24220:SF586 7 288 6.9E-160 T 23-04-2016 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 6.0E-26 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 575 661 5.4E-26 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 577 642 2.7E-18 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 1.0E-18 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 Gene3D G3DSA:3.40.50.300 342 605 3.4E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 SMART SM00382 382 583 1.4E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 SMART SM00382 34 233 6.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 Gene3D G3DSA:3.40.50.300 4 257 2.2E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS08030 3177eff37b4acbb3dc835dd25f43e2ab 664 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS05840 606ab1848e08d8db6f60bedef9b44161 233 Gene3D G3DSA:3.40.1080.10 5 218 4.4E-100 T 23-04-2016 CYCME_RS05840 606ab1848e08d8db6f60bedef9b44161 233 Pfam PF01144 Coenzyme A transferase 10 218 2.8E-77 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CYCME_RS05840 606ab1848e08d8db6f60bedef9b44161 233 SMART SM00882 8 219 1.4E-88 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CYCME_RS05840 606ab1848e08d8db6f60bedef9b44161 233 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 23-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 CYCME_RS05840 606ab1848e08d8db6f60bedef9b44161 233 PANTHER PTHR13707 1 232 5.6E-138 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CYCME_RS05840 606ab1848e08d8db6f60bedef9b44161 233 SUPERFAMILY SSF100950 4 227 9.77E-88 T 23-04-2016 CYCME_RS05840 606ab1848e08d8db6f60bedef9b44161 233 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 218 1.0E-76 T 23-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 CYCME_RS06525 fd36e05275698f2a2893f4fec568e7d4 91 Pfam PF02583 Metal-sensitive transcriptional repressor 8 83 1.1E-18 T 23-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CYCME_RS06525 fd36e05275698f2a2893f4fec568e7d4 91 PANTHER PTHR33677 1 91 1.4E-26 T 23-04-2016 CYCME_RS06525 fd36e05275698f2a2893f4fec568e7d4 91 PANTHER PTHR33677:SF1 1 91 1.4E-26 T 23-04-2016 CYCME_RS10340 ebc0f7e1fa7c3226c3611651905bee90 303 Pfam PF00487 Fatty acid desaturase 49 274 2.9E-28 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 CYCME_RS06445 028d01a52a487d89687fae7a034897f1 139 SMART SM00422 1 70 9.4E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06445 028d01a52a487d89687fae7a034897f1 139 Gene3D G3DSA:1.10.1660.10 56 130 7.7E-17 T 23-04-2016 CYCME_RS06445 028d01a52a487d89687fae7a034897f1 139 SUPERFAMILY SSF46955 1 113 8.06E-24 T 23-04-2016 IPR009061 Putative DNA-binding domain CYCME_RS06445 028d01a52a487d89687fae7a034897f1 139 Pfam PF13411 MerR HTH family regulatory protein 1 69 4.7E-14 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06445 028d01a52a487d89687fae7a034897f1 139 PANTHER PTHR30204 1 113 3.0E-18 T 23-04-2016 CYCME_RS06445 028d01a52a487d89687fae7a034897f1 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.9E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06445 028d01a52a487d89687fae7a034897f1 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.9E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CYCME_RS06445 028d01a52a487d89687fae7a034897f1 139 Gene3D G3DSA:1.10.1660.10 1 55 2.9E-20 T 23-04-2016 CYCME_RS04900 da2d67f276502e6bc051a7b7fc8480b2 142 SUPERFAMILY SSF54637 10 133 2.35E-19 T 23-04-2016 IPR029069 HotDog domain CYCME_RS04900 da2d67f276502e6bc051a7b7fc8480b2 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 111 3.1E-11 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain CYCME_RS04900 da2d67f276502e6bc051a7b7fc8480b2 142 Gene3D G3DSA:3.10.129.10 8 136 2.2E-23 T 23-04-2016 IPR029069 HotDog domain CYCME_RS04900 da2d67f276502e6bc051a7b7fc8480b2 142 PANTHER PTHR12418 1 134 4.9E-24 T 23-04-2016 CYCME_RS04900 da2d67f276502e6bc051a7b7fc8480b2 142 Pfam PF03061 Thioesterase superfamily 48 121 1.3E-9 T 23-04-2016 IPR006683 Thioesterase domain CYCME_RS04900 da2d67f276502e6bc051a7b7fc8480b2 142 PANTHER PTHR12418:SF28 1 134 4.9E-24 T 23-04-2016 CYCME_RS04870 ad80e8c628668b66e665bc678059b488 143 PANTHER PTHR12901:SF7 1 143 3.1E-50 T 23-04-2016 CYCME_RS04870 ad80e8c628668b66e665bc678059b488 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 133 1.6E-28 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain CYCME_RS04870 ad80e8c628668b66e665bc678059b488 143 PANTHER PTHR12901 1 143 3.1E-50 T 23-04-2016 CYCME_RS04870 ad80e8c628668b66e665bc678059b488 143 Gene3D G3DSA:3.30.530.20 1 143 3.0E-42 T 23-04-2016 IPR023393 START-like domain CYCME_RS04870 ad80e8c628668b66e665bc678059b488 143 SUPERFAMILY SSF55961 1 143 1.28E-28 T 23-04-2016 CYCME_RS04560 4fb7e82f1bc460ca122466488c5cbaa5 271 PIRSF PIRSF003092 1 270 2.5E-80 T 23-04-2016 IPR025501 ATP binding protein MinD CYCME_RS04560 4fb7e82f1bc460ca122466488c5cbaa5 271 PANTHER PTHR13696 1 259 2.7E-97 T 23-04-2016 CYCME_RS04560 4fb7e82f1bc460ca122466488c5cbaa5 271 Gene3D G3DSA:3.40.50.300 7 247 1.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04560 4fb7e82f1bc460ca122466488c5cbaa5 271 PANTHER PTHR13696:SF3 1 259 2.7E-97 T 23-04-2016 CYCME_RS04560 4fb7e82f1bc460ca122466488c5cbaa5 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 215 6.0E-25 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CYCME_RS04560 4fb7e82f1bc460ca122466488c5cbaa5 271 SUPERFAMILY SSF52540 8 254 1.25E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02975 5e7cd792ed906a3a26bc7f8cfa464f07 243 Pfam PF00005 ABC transporter 26 154 6.5E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS02975 5e7cd792ed906a3a26bc7f8cfa464f07 243 Gene3D G3DSA:3.40.50.300 11 215 2.4E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02975 5e7cd792ed906a3a26bc7f8cfa464f07 243 PANTHER PTHR24220:SF589 5 214 2.4E-67 T 23-04-2016 CYCME_RS02975 5e7cd792ed906a3a26bc7f8cfa464f07 243 PANTHER PTHR24220 5 214 2.4E-67 T 23-04-2016 CYCME_RS02975 5e7cd792ed906a3a26bc7f8cfa464f07 243 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS02975 5e7cd792ed906a3a26bc7f8cfa464f07 243 SMART SM00382 34 204 5.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS02975 5e7cd792ed906a3a26bc7f8cfa464f07 243 SUPERFAMILY SSF52540 24 213 1.87E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS12220 9b87a0c7a0a9f439d6284068c467fc80 115 Pfam PF02411 MerT mercuric transport protein 2 115 3.9E-54 T 23-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 CYCME_RS01060 9b87a0c7a0a9f439d6284068c467fc80 115 Pfam PF02411 MerT mercuric transport protein 2 115 3.9E-54 T 23-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 CYCME_RS10270 207c606b34e6176109b55f6e691ea932 332 Gene3D G3DSA:1.10.620.20 1 304 3.0E-95 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CYCME_RS10270 207c606b34e6176109b55f6e691ea932 332 PIRSF PIRSF000040 1 332 2.0E-91 T 23-04-2016 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 CYCME_RS10270 207c606b34e6176109b55f6e691ea932 332 SUPERFAMILY SSF47240 1 330 1.76E-93 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS10270 207c606b34e6176109b55f6e691ea932 332 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 52 275 3.0E-64 T 23-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CYCME_RS02055 a411c62eb03152a5a63aba149530d5f7 236 PANTHER PTHR38568:SF2 1 232 7.6E-88 T 23-04-2016 CYCME_RS02055 a411c62eb03152a5a63aba149530d5f7 236 PANTHER PTHR38568 1 232 7.6E-88 T 23-04-2016 CYCME_RS12185 c88c2d62f929b4d563e7a7676cf2f57b 502 Pfam PF15978 Tn7-like transposition protein D 311 439 1.1E-17 T 23-04-2016 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CYCME_RS12185 c88c2d62f929b4d563e7a7676cf2f57b 502 Pfam PF06527 TniQ 5 156 1.7E-17 T 23-04-2016 IPR009492 TniQ CYCME_RS01095 c88c2d62f929b4d563e7a7676cf2f57b 502 Pfam PF15978 Tn7-like transposition protein D 311 439 1.1E-17 T 23-04-2016 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl CYCME_RS01095 c88c2d62f929b4d563e7a7676cf2f57b 502 Pfam PF06527 TniQ 5 156 1.7E-17 T 23-04-2016 IPR009492 TniQ CYCME_RS02200 a723241856c8bb2fd755cbbdbf882eb3 282 SUPERFAMILY SSF52540 115 249 1.97E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02200 a723241856c8bb2fd755cbbdbf882eb3 282 SUPERFAMILY SSF52540 6 56 1.97E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS02200 a723241856c8bb2fd755cbbdbf882eb3 282 Gene3D G3DSA:3.40.50.300 60 241 9.8E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS05660 33eee4c792d8840859be5b03b92605ac 168 Gene3D G3DSA:3.10.180.10 7 148 6.8E-12 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS05660 33eee4c792d8840859be5b03b92605ac 168 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 121 1.0E-11 T 23-04-2016 CYCME_RS05660 33eee4c792d8840859be5b03b92605ac 168 SUPERFAMILY SSF54593 8 121 2.42E-14 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYCME_RS01650 90f960157d0ee2c5ca178f63f3c17d07 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 45 1.0E-4 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS01650 90f960157d0ee2c5ca178f63f3c17d07 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 9.6E-8 T 23-04-2016 IPR001451 Hexapeptide repeat CYCME_RS01650 90f960157d0ee2c5ca178f63f3c17d07 178 Gene3D G3DSA:2.160.10.10 2 174 1.2E-47 T 23-04-2016 CYCME_RS01650 90f960157d0ee2c5ca178f63f3c17d07 178 PANTHER PTHR13061 6 176 9.2E-73 T 23-04-2016 CYCME_RS01650 90f960157d0ee2c5ca178f63f3c17d07 178 SUPERFAMILY SSF51161 2 174 1.12E-44 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS04665 d3cd90665366dc5d7b433857cf7ec8b0 273 PANTHER PTHR31756:SF3 4 262 1.6E-83 T 23-04-2016 CYCME_RS04665 d3cd90665366dc5d7b433857cf7ec8b0 273 PANTHER PTHR31756 4 262 1.6E-83 T 23-04-2016 CYCME_RS04665 d3cd90665366dc5d7b433857cf7ec8b0 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 3 272 65.988 T 23-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein CYCME_RS04665 d3cd90665366dc5d7b433857cf7ec8b0 273 Pfam PF03618 Kinase/pyrophosphorylase 6 262 2.1E-72 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CYCME_RS09445 51cdb797a87073759f5c5a7c3b450d7a 310 Pfam PF00487 Fatty acid desaturase 55 279 1.2E-19 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 CYCME_RS09445 51cdb797a87073759f5c5a7c3b450d7a 310 PANTHER PTHR11351:SF34 2 303 8.1E-117 T 23-04-2016 CYCME_RS09445 51cdb797a87073759f5c5a7c3b450d7a 310 PANTHER PTHR11351 2 303 8.1E-117 T 23-04-2016 CYCME_RS09445 51cdb797a87073759f5c5a7c3b450d7a 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 115 144 1.4E-14 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 CYCME_RS09445 51cdb797a87073759f5c5a7c3b450d7a 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 254 268 1.4E-14 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 CYCME_RS09445 51cdb797a87073759f5c5a7c3b450d7a 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 55 77 1.4E-14 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 CYCME_RS09445 51cdb797a87073759f5c5a7c3b450d7a 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 78 98 1.4E-14 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 CYCME_RS09445 51cdb797a87073759f5c5a7c3b450d7a 310 PRINTS PR00075 Fatty acid desaturase family 1 signature 211 232 1.4E-14 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 PANTHER PTHR11455 7 468 9.2E-195 T 23-04-2016 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 SUPERFAMILY SSF48173 199 468 6.8E-103 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 PRINTS PR00147 DNA photolyase signature 387 401 9.2E-23 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 PRINTS PR00147 DNA photolyase signature 146 162 9.2E-23 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 PRINTS PR00147 DNA photolyase signature 348 366 9.2E-23 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 PRINTS PR00147 DNA photolyase signature 328 344 9.2E-23 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 328 340 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 Gene3D G3DSA:1.25.40.80 153 175 8.3E-32 T 23-04-2016 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 Gene3D G3DSA:1.25.40.80 210 285 8.3E-32 T 23-04-2016 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 Pfam PF00875 DNA photolyase 7 172 3.2E-47 T 23-04-2016 IPR006050 DNA photolyase, N-terminal CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 PANTHER PTHR11455:SF18 7 468 9.2E-195 T 23-04-2016 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 Pfam PF03441 FAD binding domain of DNA photolyase 278 468 5.4E-81 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 Gene3D G3DSA:1.10.579.10 286 468 2.0E-73 T 23-04-2016 CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 SUPERFAMILY SSF52425 7 176 4.06E-51 T 23-04-2016 IPR006050 DNA photolyase, N-terminal CYCME_RS09395 f4decef08309168160e8fed7ebb7f0ef 470 Gene3D G3DSA:3.40.50.620 3 152 5.9E-45 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS01660 56296589fb9ef3e4416a1db45205e0a5 312 ProSitePatterns PS00018 EF-hand calcium-binding domain. 222 234 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site CYCME_RS07720 e9b0902199e46aebdccf235b331b8355 230 PANTHER PTHR10859:SF92 2 174 4.4E-29 T 23-04-2016 CYCME_RS07720 e9b0902199e46aebdccf235b331b8355 230 PANTHER PTHR10859 2 174 4.4E-29 T 23-04-2016 CYCME_RS07720 e9b0902199e46aebdccf235b331b8355 230 SUPERFAMILY SSF53448 1 207 1.69E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07720 e9b0902199e46aebdccf235b331b8355 230 Gene3D G3DSA:3.90.550.10 2 224 8.5E-23 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07720 e9b0902199e46aebdccf235b331b8355 230 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 4 224 1.3E-76 T 23-04-2016 IPR026461 Transferase 2, rSAM/selenodomain-associated CYCME_RS07720 e9b0902199e46aebdccf235b331b8355 230 Pfam PF00535 Glycosyl transferase family 2 5 102 5.8E-17 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS08805 1166370f2e5fb5a894e043808af4192c 339 Gene3D G3DSA:3.30.930.10 9 339 7.8E-134 T 23-04-2016 CYCME_RS08805 1166370f2e5fb5a894e043808af4192c 339 SUPERFAMILY SSF46589 15 100 4.87E-22 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CYCME_RS08805 1166370f2e5fb5a894e043808af4192c 339 SUPERFAMILY SSF55681 93 339 2.58E-82 T 23-04-2016 CYCME_RS08805 1166370f2e5fb5a894e043808af4192c 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 338 7.6E-109 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CYCME_RS08805 1166370f2e5fb5a894e043808af4192c 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 338 49.295 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CYCME_RS08805 1166370f2e5fb5a894e043808af4192c 339 Pfam PF01409 tRNA synthetases class II core domain (F) 93 338 2.7E-107 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CYCME_RS08805 1166370f2e5fb5a894e043808af4192c 339 PANTHER PTHR11538 93 338 1.9E-104 T 23-04-2016 CYCME_RS08805 1166370f2e5fb5a894e043808af4192c 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 1.1E-23 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CYCME_RS08175 f45c9bf4166cc22230aa652d180a20df 92 Pfam PF00639 PPIC-type PPIASE domain 12 87 1.7E-20 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CYCME_RS08175 f45c9bf4166cc22230aa652d180a20df 92 SUPERFAMILY SSF54534 3 87 7.85E-27 T 23-04-2016 CYCME_RS08175 f45c9bf4166cc22230aa652d180a20df 92 Gene3D G3DSA:3.10.50.40 3 91 7.9E-32 T 23-04-2016 CYCME_RS08175 f45c9bf4166cc22230aa652d180a20df 92 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CYCME_RS08175 f45c9bf4166cc22230aa652d180a20df 92 PANTHER PTHR10657 6 87 2.9E-31 T 23-04-2016 CYCME_RS06420 2ef69af391341ded80a1b4b5078bc941 104 Pfam PF11666 Protein of unknown function (DUF2933) 18 68 1.9E-24 T 23-04-2016 IPR021682 Protein of unknown function DUF2933 CYCME_RS06010 9a0ccf468146fd7c77ae8a2210836015 400 Pfam PF05940 NnrS protein 17 394 2.1E-94 T 23-04-2016 IPR010266 NnrS CYCME_RS00400 df023c9d576a9047c393bfdbae7306cf 232 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 17 229 30.042 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CYCME_RS00400 df023c9d576a9047c393bfdbae7306cf 232 SUPERFAMILY SSF53335 8 229 6.56E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS00400 df023c9d576a9047c393bfdbae7306cf 232 Pfam PF02390 Putative methyltransferase 56 224 2.4E-56 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CYCME_RS00400 df023c9d576a9047c393bfdbae7306cf 232 PANTHER PTHR23417 10 227 2.4E-70 T 23-04-2016 CYCME_RS00400 df023c9d576a9047c393bfdbae7306cf 232 PANTHER PTHR23417:SF14 10 227 2.4E-70 T 23-04-2016 CYCME_RS00400 df023c9d576a9047c393bfdbae7306cf 232 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 51 227 3.4E-57 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CYCME_RS00400 df023c9d576a9047c393bfdbae7306cf 232 Gene3D G3DSA:3.40.50.150 54 184 4.5E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS03780 f58185a923301239e9430cc2ffe24659 130 Gene3D G3DSA:3.90.1030.10 1 117 1.1E-49 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03780 f58185a923301239e9430cc2ffe24659 130 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-33 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03780 f58185a923301239e9430cc2ffe24659 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.3E-46 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03780 f58185a923301239e9430cc2ffe24659 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03780 f58185a923301239e9430cc2ffe24659 130 SUPERFAMILY SSF64263 1 119 5.49E-50 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03780 f58185a923301239e9430cc2ffe24659 130 PANTHER PTHR14413 1 121 1.0E-63 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS03780 f58185a923301239e9430cc2ffe24659 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.184 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS07635 641552b065f02ad8270f2305e3af3da1 188 Hamap MF_00052_B Ribonuclease HII [rnhB]. 4 183 33.482 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 CYCME_RS07635 641552b065f02ad8270f2305e3af3da1 188 PANTHER PTHR10954 4 187 3.1E-59 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 CYCME_RS07635 641552b065f02ad8270f2305e3af3da1 188 Gene3D G3DSA:3.30.420.10 4 143 2.0E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07635 641552b065f02ad8270f2305e3af3da1 188 Pfam PF01351 Ribonuclease HII 6 181 9.1E-35 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain CYCME_RS07635 641552b065f02ad8270f2305e3af3da1 188 SUPERFAMILY SSF53098 4 187 6.83E-60 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS03350 f37fb54d51944d936caa29abef64a86b 516 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 75 227 1.7E-7 T 23-04-2016 CYCME_RS04575 b356bab0a4f86d03a27b000fd5f6bb09 337 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 250 270 1.4E-5 T 23-04-2016 CYCME_RS04575 b356bab0a4f86d03a27b000fd5f6bb09 337 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 230 249 1.4E-5 T 23-04-2016 CYCME_RS04575 b356bab0a4f86d03a27b000fd5f6bb09 337 SUPERFAMILY SSF103088 143 267 2.88E-31 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS04575 b356bab0a4f86d03a27b000fd5f6bb09 337 PANTHER PTHR30329:SF4 1 293 5.5E-70 T 23-04-2016 CYCME_RS04575 b356bab0a4f86d03a27b000fd5f6bb09 337 Gene3D G3DSA:3.30.1330.60 144 267 3.5E-33 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS04575 b356bab0a4f86d03a27b000fd5f6bb09 337 Pfam PF00691 OmpA family 164 261 1.1E-18 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS04575 b356bab0a4f86d03a27b000fd5f6bb09 337 PANTHER PTHR30329 1 293 5.5E-70 T 23-04-2016 CYCME_RS04575 b356bab0a4f86d03a27b000fd5f6bb09 337 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 1.3E-21 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain CYCME_RS11015 9a325241dea684528ea0fc32ba2fe21f 426 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 325 410 1.9E-12 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CYCME_RS11015 9a325241dea684528ea0fc32ba2fe21f 426 Pfam PF01943 Polysaccharide biosynthesis protein 5 272 4.9E-32 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CYCME_RS11015 9a325241dea684528ea0fc32ba2fe21f 426 PANTHER PTHR30250 2 397 3.7E-46 T 23-04-2016 CYCME_RS11015 9a325241dea684528ea0fc32ba2fe21f 426 PANTHER PTHR30250:SF0 2 397 3.7E-46 T 23-04-2016 CYCME_RS11585 bcf32bd39154e3fb53b6301dd7e59943 231 PANTHER PTHR30035:SF3 3 226 5.5E-65 T 23-04-2016 CYCME_RS11585 bcf32bd39154e3fb53b6301dd7e59943 231 PRINTS PR01805 VacJ lipoprotein signature 126 143 6.1E-25 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CYCME_RS11585 bcf32bd39154e3fb53b6301dd7e59943 231 PRINTS PR01805 VacJ lipoprotein signature 39 55 6.1E-25 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CYCME_RS11585 bcf32bd39154e3fb53b6301dd7e59943 231 PRINTS PR01805 VacJ lipoprotein signature 90 107 6.1E-25 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CYCME_RS11585 bcf32bd39154e3fb53b6301dd7e59943 231 PRINTS PR01805 VacJ lipoprotein signature 22 35 6.1E-25 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CYCME_RS11585 bcf32bd39154e3fb53b6301dd7e59943 231 Pfam PF04333 MlaA lipoprotein 21 213 1.0E-75 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CYCME_RS11585 bcf32bd39154e3fb53b6301dd7e59943 231 PANTHER PTHR30035 3 226 5.5E-65 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CYCME_RS06080 ef1be45efa4ee1b09eb1a35be10a75c4 153 Gene3D G3DSA:3.40.50.360 1 148 1.8E-29 T 23-04-2016 IPR029039 Flavoprotein-like domain CYCME_RS06080 ef1be45efa4ee1b09eb1a35be10a75c4 153 SUPERFAMILY SSF52218 1 147 8.98E-26 T 23-04-2016 IPR029039 Flavoprotein-like domain CYCME_RS06080 ef1be45efa4ee1b09eb1a35be10a75c4 153 Pfam PF03358 NADPH-dependent FMN reductase 40 121 1.4E-7 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CYCME_RS02010 e33655c855fc33a3eb1b095968b53d53 230 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 11 229 1.1E-45 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 CYCME_RS02010 e33655c855fc33a3eb1b095968b53d53 230 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 17 229 2.1E-40 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 CYCME_RS02565 e19b66468df2c9d6c0295fa70088a810 51 Pfam PF00471 Ribosomal protein L33 4 49 4.9E-18 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS02565 e19b66468df2c9d6c0295fa70088a810 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.219 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS02565 e19b66468df2c9d6c0295fa70088a810 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS02565 e19b66468df2c9d6c0295fa70088a810 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 8.0E-23 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CYCME_RS02565 e19b66468df2c9d6c0295fa70088a810 51 SUPERFAMILY SSF57829 1 49 1.89E-18 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CYCME_RS02565 e19b66468df2c9d6c0295fa70088a810 51 PANTHER PTHR15238 1 51 5.6E-21 T 23-04-2016 CYCME_RS02755 5284495bebc7c76575f4d63c2115e967 145 Gene3D G3DSA:3.30.428.10 2 134 1.3E-30 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CYCME_RS02755 5284495bebc7c76575f4d63c2115e967 145 PANTHER PTHR23089 24 127 1.6E-16 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CYCME_RS02755 5284495bebc7c76575f4d63c2115e967 145 PIRSF PIRSF000714 2 141 5.3E-49 T 23-04-2016 IPR026026 Histidine triad hydrolase, Hint-type CYCME_RS02755 5284495bebc7c76575f4d63c2115e967 145 PANTHER PTHR23089:SF13 24 127 1.6E-16 T 23-04-2016 CYCME_RS02755 5284495bebc7c76575f4d63c2115e967 145 SUPERFAMILY SSF54197 2 134 2.98E-31 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CYCME_RS02755 5284495bebc7c76575f4d63c2115e967 145 Pfam PF01230 HIT domain 12 100 2.3E-12 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CYCME_RS01620 d0873420b8ad27e700de9237e4d76da9 184 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 184 32.773 T 23-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CYCME_RS01620 d0873420b8ad27e700de9237e4d76da9 184 SUPERFAMILY SSF55821 2 178 6.71E-44 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CYCME_RS01620 d0873420b8ad27e700de9237e4d76da9 184 PANTHER PTHR17490 11 176 7.2E-64 T 23-04-2016 CYCME_RS01620 d0873420b8ad27e700de9237e4d76da9 184 Gene3D G3DSA:3.90.870.10 5 176 1.3E-44 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CYCME_RS01620 d0873420b8ad27e700de9237e4d76da9 184 PANTHER PTHR17490:SF8 11 176 7.2E-64 T 23-04-2016 CYCME_RS01620 d0873420b8ad27e700de9237e4d76da9 184 Pfam PF01300 Telomere recombination 14 176 1.8E-35 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CYCME_RS06985 cba76efa16764794210c2daefc8a97f9 179 Pfam PF01794 Ferric reductase like transmembrane component 5 132 7.4E-7 T 23-04-2016 IPR013130 Ferric reductase transmembrane component-like domain CYCME_RS05765 ec651490c9c5c7a7e55a1982cfd27f49 223 PANTHER PTHR23291 1 223 3.6E-85 T 23-04-2016 IPR006214 Bax inhibitor 1-related CYCME_RS05765 ec651490c9c5c7a7e55a1982cfd27f49 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 1.8E-40 T 23-04-2016 CYCME_RS05765 ec651490c9c5c7a7e55a1982cfd27f49 223 PANTHER PTHR23291:SF37 1 223 3.6E-85 T 23-04-2016 CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 PANTHER PTHR11730:SF6 2 84 1.8E-131 T 23-04-2016 CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 ProSitePatterns PS01219 Ammonium transporters signature. 180 205 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 SUPERFAMILY SSF111352 9 400 8.89E-100 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 Gene3D G3DSA:1.10.3430.10 8 400 2.3E-104 T 23-04-2016 IPR029020 Ammonium/urea transporter CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 PANTHER PTHR11730:SF6 106 425 1.8E-131 T 23-04-2016 CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 9 422 1.9E-205 T 23-04-2016 IPR019879 Ammonium transporter, marine subtype CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 PANTHER PTHR11730 106 425 1.8E-131 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 PANTHER PTHR11730 2 84 1.8E-131 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CYCME_RS02020 0434aeee2a3954433b62e4b3a12183d4 425 Pfam PF00909 Ammonium Transporter Family 16 419 4.1E-94 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CYCME_RS12800 76457e402f7b2b3aab1057cff42451fc 1319 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1232 1244 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site CYCME_RS12800 76457e402f7b2b3aab1057cff42451fc 1319 Pfam PF05567 Neisseria PilC beta-propeller domain 752 1126 2.5E-70 T 23-04-2016 IPR008707 PilC beta-propeller domain CYCME_RS03260 2573e3f3aa5a77bbc6e1d11cd1998821 258 PANTHER PTHR30502 1 255 4.0E-88 T 23-04-2016 CYCME_RS03260 2573e3f3aa5a77bbc6e1d11cd1998821 258 SUPERFAMILY SSF51621 2 255 3.01E-78 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS03260 2573e3f3aa5a77bbc6e1d11cd1998821 258 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 244 1.4E-49 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CYCME_RS03260 2573e3f3aa5a77bbc6e1d11cd1998821 258 Gene3D G3DSA:3.20.20.60 5 255 2.3E-75 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS03260 2573e3f3aa5a77bbc6e1d11cd1998821 258 PANTHER PTHR30502:SF0 1 255 4.0E-88 T 23-04-2016 CYCME_RS03040 b5950ae6d850e83c011bf7d7d70b0f6f 90 SMART SM01409 8 60 9.1E-17 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03040 b5950ae6d850e83c011bf7d7d70b0f6f 90 SUPERFAMILY SSF63562 1 68 7.19E-24 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03040 b5950ae6d850e83c011bf7d7d70b0f6f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 17.103 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03040 b5950ae6d850e83c011bf7d7d70b0f6f 90 Pfam PF01192 RNA polymerase Rpb6 8 59 1.0E-18 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03040 b5950ae6d850e83c011bf7d7d70b0f6f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 1.2E-19 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03040 b5950ae6d850e83c011bf7d7d70b0f6f 90 Gene3D G3DSA:3.90.940.10 1 62 6.4E-15 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CYCME_RS03040 b5950ae6d850e83c011bf7d7d70b0f6f 90 PANTHER PTHR34476 2 90 8.2E-23 T 23-04-2016 CYCME_RS03340 6ededa26b0905fae4fe534134ea12dfc 351 SUPERFAMILY SSF53756 68 348 2.07E-8 T 23-04-2016 CYCME_RS03340 6ededa26b0905fae4fe534134ea12dfc 351 Pfam PF13524 Glycosyl transferases group 1 252 348 6.4E-22 T 23-04-2016 CYCME_RS01950 df9b955a628ec0e2f1ad0d2d1ccd16b0 461 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 429 1.1E-93 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CYCME_RS01950 df9b955a628ec0e2f1ad0d2d1ccd16b0 461 Gene3D G3DSA:1.20.1600.10 21 422 7.3E-55 T 23-04-2016 CYCME_RS01950 df9b955a628ec0e2f1ad0d2d1ccd16b0 461 PANTHER PTHR30026 1 446 5.2E-64 T 23-04-2016 CYCME_RS01950 df9b955a628ec0e2f1ad0d2d1ccd16b0 461 PANTHER PTHR30026:SF4 1 446 5.2E-64 T 23-04-2016 CYCME_RS01950 df9b955a628ec0e2f1ad0d2d1ccd16b0 461 SUPERFAMILY SSF56954 24 430 5.89E-72 T 23-04-2016 CYCME_RS01950 df9b955a628ec0e2f1ad0d2d1ccd16b0 461 Pfam PF02321 Outer membrane efflux protein 236 417 2.6E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS01950 df9b955a628ec0e2f1ad0d2d1ccd16b0 461 Pfam PF02321 Outer membrane efflux protein 25 216 2.5E-17 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CYCME_RS10980 9959088dffe8978d5c0d2189e984afb2 320 Gene3D G3DSA:3.90.550.10 15 247 1.0E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS10980 9959088dffe8978d5c0d2189e984afb2 320 Pfam PF00535 Glycosyl transferase family 2 15 176 1.7E-25 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS10980 9959088dffe8978d5c0d2189e984afb2 320 SUPERFAMILY SSF53448 12 258 3.25E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS10980 9959088dffe8978d5c0d2189e984afb2 320 PANTHER PTHR22916 16 229 2.3E-33 T 23-04-2016 CYCME_RS05145 bbbe4ddd73d66ddbf4458022f251dd6a 245 SUPERFAMILY SSF141371 143 235 2.88E-7 T 23-04-2016 CYCME_RS05145 bbbe4ddd73d66ddbf4458022f251dd6a 245 Gene3D G3DSA:2.30.110.10 25 127 1.4E-10 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CYCME_RS05145 bbbe4ddd73d66ddbf4458022f251dd6a 245 Pfam PF07317 Flagellar regulator YcgR 29 124 4.2E-7 T 23-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CYCME_RS05145 bbbe4ddd73d66ddbf4458022f251dd6a 245 Gene3D G3DSA:2.40.10.220 128 245 1.8E-16 T 23-04-2016 CYCME_RS05145 bbbe4ddd73d66ddbf4458022f251dd6a 245 Pfam PF07238 PilZ domain 127 236 7.0E-11 T 23-04-2016 IPR009875 PilZ domain GO:0035438 CYCME_RS10040 dedbfd192d6b79f3885402f2f7fd9339 80 PANTHER PTHR34477:SF1 1 79 4.6E-34 T 23-04-2016 CYCME_RS10040 dedbfd192d6b79f3885402f2f7fd9339 80 PANTHER PTHR34477 1 79 4.6E-34 T 23-04-2016 CYCME_RS10040 dedbfd192d6b79f3885402f2f7fd9339 80 Pfam PF01541 GIY-YIG catalytic domain 3 74 5.3E-18 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CYCME_RS10040 dedbfd192d6b79f3885402f2f7fd9339 80 SUPERFAMILY SSF82771 1 71 9.42E-15 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CYCME_RS01445 f5920c87e2aa8952fa2b11762efa23ba 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 3 150 31.666 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 CYCME_RS01445 f5920c87e2aa8952fa2b11762efa23ba 152 PANTHER PTHR35146 1 152 8.2E-52 T 23-04-2016 CYCME_RS01445 f5920c87e2aa8952fa2b11762efa23ba 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 148 3.1E-49 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 CYCME_RS01445 f5920c87e2aa8952fa2b11762efa23ba 152 PANTHER PTHR35146:SF1 1 152 8.2E-52 T 23-04-2016 CYCME_RS02400 6eec80220f12403e47203522568ed22b 254 SUPERFAMILY SSF81345 44 235 1.24E-10 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CYCME_RS02400 6eec80220f12403e47203522568ed22b 254 Pfam PF00950 ABC 3 transport family 9 161 3.4E-10 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 CYCME_RS10780 979f35184d4374ffe19d96fbf1d1383b 143 SUPERFAMILY SSF54637 5 137 1.77E-23 T 23-04-2016 IPR029069 HotDog domain CYCME_RS10780 979f35184d4374ffe19d96fbf1d1383b 143 Gene3D G3DSA:3.10.129.10 12 139 1.6E-22 T 23-04-2016 IPR029069 HotDog domain CYCME_RS10780 979f35184d4374ffe19d96fbf1d1383b 143 Pfam PF13279 Thioesterase-like superfamily 20 137 9.0E-13 T 23-04-2016 CYCME_RS10780 979f35184d4374ffe19d96fbf1d1383b 143 PANTHER PTHR31793 1 139 1.4E-19 T 23-04-2016 CYCME_RS02850 6d02c52a440876afed6e5f6d56eacf52 201 Pfam PF09335 SNARE associated Golgi protein 40 161 3.7E-16 T 23-04-2016 IPR032816 SNARE associated Golgi protein CYCME_RS02850 6d02c52a440876afed6e5f6d56eacf52 201 PANTHER PTHR30353:SF5 1 191 5.9E-58 T 23-04-2016 CYCME_RS02850 6d02c52a440876afed6e5f6d56eacf52 201 PANTHER PTHR30353 1 191 5.9E-58 T 23-04-2016 IPR032818 DedA family CYCME_RS06085 92f046ed3842c8165c41e69d20ed3408 397 Gene3D G3DSA:3.30.1540.10 224 305 1.0E-26 T 23-04-2016 CYCME_RS06085 92f046ed3842c8165c41e69d20ed3408 397 PANTHER PTHR24023 70 378 1.2E-28 T 23-04-2016 CYCME_RS06085 92f046ed3842c8165c41e69d20ed3408 397 Pfam PF02515 CoA-transferase family III 6 368 3.6E-120 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CYCME_RS06085 92f046ed3842c8165c41e69d20ed3408 397 PANTHER PTHR24023:SF593 70 378 1.2E-28 T 23-04-2016 CYCME_RS06085 92f046ed3842c8165c41e69d20ed3408 397 Gene3D G3DSA:3.40.50.10540 4 217 6.6E-108 T 23-04-2016 IPR023606 CoA-transferase family III domain CYCME_RS06085 92f046ed3842c8165c41e69d20ed3408 397 Gene3D G3DSA:3.40.50.10540 306 390 6.6E-108 T 23-04-2016 IPR023606 CoA-transferase family III domain CYCME_RS06085 92f046ed3842c8165c41e69d20ed3408 397 SUPERFAMILY SSF89796 5 387 4.19E-129 T 23-04-2016 IPR023606 CoA-transferase family III domain CYCME_RS10775 d85bc3cca7e5c6c091b3d31544be955b 294 PANTHER PTHR12715:SF4 8 286 8.9E-50 T 23-04-2016 CYCME_RS10775 d85bc3cca7e5c6c091b3d31544be955b 294 SUPERFAMILY SSF103481 188 288 4.84E-11 T 23-04-2016 CYCME_RS10775 d85bc3cca7e5c6c091b3d31544be955b 294 Pfam PF00892 EamA-like transporter family 154 286 4.4E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS10775 d85bc3cca7e5c6c091b3d31544be955b 294 Pfam PF00892 EamA-like transporter family 7 140 1.4E-23 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS10775 d85bc3cca7e5c6c091b3d31544be955b 294 SUPERFAMILY SSF103481 47 140 2.48E-15 T 23-04-2016 CYCME_RS10775 d85bc3cca7e5c6c091b3d31544be955b 294 PANTHER PTHR12715 8 286 8.9E-50 T 23-04-2016 CYCME_RS01530 751a8765e9eead29f6d305c9939e4c38 84 Pfam PF02597 ThiS family 28 84 3.6E-7 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CYCME_RS01530 751a8765e9eead29f6d305c9939e4c38 84 SUPERFAMILY SSF54285 27 84 4.51E-9 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CYCME_RS01530 751a8765e9eead29f6d305c9939e4c38 84 Gene3D G3DSA:3.10.20.30 3 84 7.2E-12 T 23-04-2016 IPR012675 Beta-grasp domain CYCME_RS03955 86a4b3d40369cfbc3f9fd0f676a3eaff 483 Pfam PF00575 S1 RNA binding domain 38 103 6.4E-5 T 23-04-2016 IPR003029 S1 domain GO:0003676 CYCME_RS03955 86a4b3d40369cfbc3f9fd0f676a3eaff 483 SUPERFAMILY SSF50249 39 120 8.67E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03955 86a4b3d40369cfbc3f9fd0f676a3eaff 483 PANTHER PTHR30001 1 483 8.9E-185 T 23-04-2016 CYCME_RS03955 86a4b3d40369cfbc3f9fd0f676a3eaff 483 Pfam PF10150 Ribonuclease E/G family 117 387 2.0E-91 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CYCME_RS03955 86a4b3d40369cfbc3f9fd0f676a3eaff 483 SMART SM00316 37 115 1.5E-6 T 23-04-2016 IPR022967 RNA-binding domain, S1 CYCME_RS03955 86a4b3d40369cfbc3f9fd0f676a3eaff 483 Gene3D G3DSA:2.40.50.140 30 121 6.2E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CYCME_RS03955 86a4b3d40369cfbc3f9fd0f676a3eaff 483 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 3.8E-140 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 Pfam PF01022 Bacterial regulatory protein, arsR family 12 58 8.4E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 SMART SM00418 5 87 2.3E-24 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.5E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.5E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.5E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.5E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 PANTHER PTHR33154 5 91 5.0E-22 T 23-04-2016 CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 Gene3D G3DSA:1.10.10.10 4 82 1.8E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS05515 cdfd2e079f44881ad4eeecc08b94e0b3 114 SUPERFAMILY SSF46785 4 82 2.78E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS10745 0a0407085d401b985ef4bf94cccaf16a 202 Pfam PF06804 NlpB/DapX lipoprotein 88 196 1.8E-7 T 23-04-2016 IPR010653 NlpB/DapX lipoprotein CYCME_RS05065 5df3cc705cffc7c233da86078a6c1523 441 Gene3D G3DSA:3.30.70.20 36 94 2.6E-4 T 23-04-2016 CYCME_RS05065 5df3cc705cffc7c233da86078a6c1523 441 PANTHER PTHR32479:SF9 27 441 3.5E-44 T 23-04-2016 CYCME_RS05065 5df3cc705cffc7c233da86078a6c1523 441 PANTHER PTHR32479 27 441 3.5E-44 T 23-04-2016 CYCME_RS05065 5df3cc705cffc7c233da86078a6c1523 441 Pfam PF02754 Cysteine-rich domain 204 289 1.0E-8 T 23-04-2016 IPR004017 Cysteine-rich domain CYCME_RS05065 5df3cc705cffc7c233da86078a6c1523 441 Pfam PF02754 Cysteine-rich domain 336 412 0.04 T 23-04-2016 IPR004017 Cysteine-rich domain CYCME_RS05810 77375f21059ea7cfc34c9248cc905aeb 205 PANTHER PTHR33798 8 201 7.2E-64 T 23-04-2016 CYCME_RS05810 77375f21059ea7cfc34c9248cc905aeb 205 SMART SM00903 17 172 2.6E-15 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CYCME_RS05810 77375f21059ea7cfc34c9248cc905aeb 205 SUPERFAMILY SSF50475 4 196 1.32E-45 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CYCME_RS05810 77375f21059ea7cfc34c9248cc905aeb 205 Gene3D G3DSA:2.30.110.10 10 188 1.7E-61 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CYCME_RS05810 77375f21059ea7cfc34c9248cc905aeb 205 Pfam PF01613 Flavin reductase like domain 21 166 8.7E-21 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 Pfam PF01019 Gamma-glutamyltranspeptidase 47 554 1.6E-161 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 SUPERFAMILY SSF56235 25 557 2.16E-167 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 551 1.2E-146 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PANTHER PTHR11686 33 563 4.5E-191 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PANTHER PTHR11686:SF9 33 563 4.5E-191 T 23-04-2016 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 165 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 435 450 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 244 260 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 274 293 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 475 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 394 412 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 54 79 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 370 388 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS03190 b938ae91431604e9657d5ce9f39d54e4 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 128 146 1.9E-60 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CYCME_RS10880 834f8c61e7160f227f6fa6a567c8fe6e 121 Gene3D G3DSA:2.20.110.10 13 119 1.0E-12 T 23-04-2016 CYCME_RS10880 834f8c61e7160f227f6fa6a567c8fe6e 121 Pfam PF07661 MORN repeat variant 100 120 0.018 T 23-04-2016 IPR011652 MORN variant CYCME_RS10880 834f8c61e7160f227f6fa6a567c8fe6e 121 Pfam PF07661 MORN repeat variant 77 96 0.0035 T 23-04-2016 IPR011652 MORN variant CYCME_RS10880 834f8c61e7160f227f6fa6a567c8fe6e 121 SUPERFAMILY SSF82185 15 120 1.02E-19 T 23-04-2016 CYCME_RS08420 e3932d6d145107a489cfe1c94caf6b9a 139 PANTHER PTHR30558:SF5 1 131 1.2E-35 T 23-04-2016 CYCME_RS08420 e3932d6d145107a489cfe1c94caf6b9a 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 132 2.7E-31 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CYCME_RS08420 e3932d6d145107a489cfe1c94caf6b9a 139 PANTHER PTHR30558 1 131 1.2E-35 T 23-04-2016 CYCME_RS06885 930ddbc9c63b9af9aa2c4e723ba9e3b3 294 Gene3D G3DSA:3.40.50.300 2 274 9.9E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06885 930ddbc9c63b9af9aa2c4e723ba9e3b3 294 Pfam PF00685 Sulfotransferase domain 3 262 2.6E-11 T 23-04-2016 IPR000863 Sulfotransferase domain GO:0008146 CYCME_RS06885 930ddbc9c63b9af9aa2c4e723ba9e3b3 294 PANTHER PTHR10605:SF40 4 184 1.3E-21 T 23-04-2016 CYCME_RS06885 930ddbc9c63b9af9aa2c4e723ba9e3b3 294 SUPERFAMILY SSF52540 1 275 3.56E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS06885 930ddbc9c63b9af9aa2c4e723ba9e3b3 294 PANTHER PTHR10605 4 184 1.3E-21 T 23-04-2016 CYCME_RS02445 1c769973e136d3b89fdfdfed64feb891 97 Gene3D G3DSA:3.30.70.900 2 95 5.0E-15 T 23-04-2016 CYCME_RS02445 1c769973e136d3b89fdfdfed64feb891 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 66 1.1E-8 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain CYCME_RS02445 1c769973e136d3b89fdfdfed64feb891 97 SUPERFAMILY SSF54909 1 90 4.54E-16 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CYCME_RS11615 dbc72c346d2f99ca1a6d23da3a863b3c 232 Pfam PF08239 Bacterial SH3 domain 42 91 1.2E-7 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CYCME_RS11615 dbc72c346d2f99ca1a6d23da3a863b3c 232 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 33 227 1.9E-58 T 23-04-2016 IPR016476 SH3 domain protein CYCME_RS11615 dbc72c346d2f99ca1a6d23da3a863b3c 232 SMART SM00287 29 94 1.9E-8 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CYCME_RS08110 3394a4875030402482a9366ecc01988c 82 Pfam PF04023 FeoA domain 12 80 2.0E-6 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CYCME_RS08110 3394a4875030402482a9366ecc01988c 82 SUPERFAMILY SSF50037 13 80 1.34E-7 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CYCME_RS10415 b9711a43c7ac31e12858b7ee408cc012 139 Gene3D G3DSA:3.40.50.2300 2 129 5.4E-38 T 23-04-2016 CYCME_RS10415 b9711a43c7ac31e12858b7ee408cc012 139 SUPERFAMILY SSF52172 3 127 2.13E-37 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS10415 b9711a43c7ac31e12858b7ee408cc012 139 Pfam PF00072 Response regulator receiver domain 5 119 1.7E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS10415 b9711a43c7ac31e12858b7ee408cc012 139 PANTHER PTHR24423 3 119 5.1E-39 T 23-04-2016 CYCME_RS10415 b9711a43c7ac31e12858b7ee408cc012 139 SMART SM00448 3 118 4.1E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 Gene3D G3DSA:1.20.1330.10 531 585 1.8E-51 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 Gene3D G3DSA:1.20.1330.10 54 171 1.8E-51 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 SUPERFAMILY SSF64518 448 629 5.36E-33 T 23-04-2016 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 SUPERFAMILY SSF64518 1 287 1.11E-65 T 23-04-2016 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 PRINTS PR00207 Flagellin signature 111 134 5.3E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 PRINTS PR00207 Flagellin signature 37 54 5.3E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 PRINTS PR00207 Flagellin signature 76 95 5.3E-27 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 Pfam PF00700 Bacterial flagellin C-terminal helical region 544 628 1.3E-26 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 PANTHER PTHR30244:SF1 486 629 1.2E-120 T 23-04-2016 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 PANTHER PTHR30244:SF1 3 190 1.2E-120 T 23-04-2016 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 PANTHER PTHR30244 486 629 1.2E-120 T 23-04-2016 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 PANTHER PTHR30244 3 190 1.2E-120 T 23-04-2016 CYCME_RS05220 f2be217468c6ac91e2d9ce8eef2e6c8e 629 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.3E-42 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CYCME_RS03200 83a1ef27aabb5e15c6b95dfe8cc2ad4c 116 SUPERFAMILY SSF54913 1 101 1.31E-19 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CYCME_RS03200 83a1ef27aabb5e15c6b95dfe8cc2ad4c 116 SMART SM00938 6 104 1.4E-5 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CYCME_RS03200 83a1ef27aabb5e15c6b95dfe8cc2ad4c 116 Gene3D G3DSA:3.30.70.120 3 102 9.1E-8 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYCME_RS01005 d5b390a3727d2c6d403913904084b802 147 Pfam PF01152 Bacterial-like globin 31 137 9.5E-5 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 CYCME_RS01005 d5b390a3727d2c6d403913904084b802 147 Gene3D G3DSA:1.10.490.10 31 139 1.6E-16 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CYCME_RS01005 d5b390a3727d2c6d403913904084b802 147 SUPERFAMILY SSF46458 31 143 2.45E-19 T 23-04-2016 IPR009050 Globin-like CYCME_RS08560 4bdc45298232557b147774e298477a9d 222 SUPERFAMILY SSF48613 1 214 3.67E-63 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 CYCME_RS08560 4bdc45298232557b147774e298477a9d 222 Pfam PF14518 Iron-containing redox enzyme 39 206 5.7E-31 T 23-04-2016 IPR028201 PqqC-like protein CYCME_RS08560 4bdc45298232557b147774e298477a9d 222 Gene3D G3DSA:1.20.910.10 1 201 9.9E-24 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 CYCME_RS08560 4bdc45298232557b147774e298477a9d 222 SMART SM01236 73 170 2.9E-10 T 23-04-2016 CYCME_RS03335 84492708fd42f943228bbbf5c6ea27d4 380 Pfam PF00534 Glycosyl transferases group 1 195 345 5.2E-35 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CYCME_RS03335 84492708fd42f943228bbbf5c6ea27d4 380 SUPERFAMILY SSF53756 79 378 6.98E-65 T 23-04-2016 CYCME_RS03335 84492708fd42f943228bbbf5c6ea27d4 380 Gene3D G3DSA:3.40.50.2000 175 346 2.4E-31 T 23-04-2016 CYCME_RS03335 84492708fd42f943228bbbf5c6ea27d4 380 PANTHER PTHR12526 87 378 1.2E-51 T 23-04-2016 CYCME_RS03335 84492708fd42f943228bbbf5c6ea27d4 380 Pfam PF13439 Glycosyltransferase Family 4 69 186 2.4E-11 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CYCME_RS11575 f38bbf9588a923c71bbf97b771afef03 78 Pfam PF09723 Zinc ribbon domain 1 41 3.4E-16 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CYCME_RS11575 f38bbf9588a923c71bbf97b771afef03 78 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 2.3E-23 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CYCME_RS11575 f38bbf9588a923c71bbf97b771afef03 78 PANTHER PTHR34404 2 76 7.9E-20 T 23-04-2016 CYCME_RS11575 f38bbf9588a923c71bbf97b771afef03 78 SMART SM00834 1 42 1.7E-18 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CYCME_RS11575 f38bbf9588a923c71bbf97b771afef03 78 PANTHER PTHR34404:SF2 2 76 7.9E-20 T 23-04-2016 CYCME_RS00880 f31b248c5b3bbe3a4a814bd30e9268ed 248 Pfam PF13852 Protein of unknown function (DUF4197) 47 246 3.6E-74 T 23-04-2016 IPR025245 Protein of unknown function DUF4197 CYCME_RS07775 4265337e09eb367e17f85cb831756860 442 Gene3D G3DSA:3.20.20.30 1 310 7.5E-132 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CYCME_RS07775 4265337e09eb367e17f85cb831756860 442 Gene3D G3DSA:3.20.20.30 348 436 7.5E-132 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CYCME_RS07775 4265337e09eb367e17f85cb831756860 442 PANTHER PTHR30011 1 440 7.5E-234 T 23-04-2016 CYCME_RS07775 4265337e09eb367e17f85cb831756860 442 PANTHER PTHR30011:SF18 1 440 7.5E-234 T 23-04-2016 CYCME_RS07775 4265337e09eb367e17f85cb831756860 442 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 430 3.6E-169 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CYCME_RS07775 4265337e09eb367e17f85cb831756860 442 SUPERFAMILY SSF51679 4 436 7.33E-131 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CYCME_RS07775 4265337e09eb367e17f85cb831756860 442 PIRSF PIRSF000337 3 441 1.1E-155 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CYCME_RS07775 4265337e09eb367e17f85cb831756860 442 Pfam PF00296 Luciferase-like monooxygenase 21 326 1.1E-59 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CYCME_RS00295 5e1c2ecaf38b91fd8949b8eb96c7dc99 177 Pfam PF04351 Pilus assembly protein, PilP 30 175 9.1E-50 T 23-04-2016 IPR007446 Pilus assembly protein PilP CYCME_RS00295 5e1c2ecaf38b91fd8949b8eb96c7dc99 177 PIRSF PIRSF016481 4 177 9.0E-46 T 23-04-2016 IPR007446 Pilus assembly protein PilP CYCME_RS10740 5740dce94085aeaf2f035b8e9477c5fb 238 SUPERFAMILY SSF56281 1 192 5.9E-37 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10740 5740dce94085aeaf2f035b8e9477c5fb 238 PANTHER PTHR13754:SF15 1 227 6.6E-57 T 23-04-2016 CYCME_RS10740 5740dce94085aeaf2f035b8e9477c5fb 238 SMART SM00849 2 150 0.0041 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10740 5740dce94085aeaf2f035b8e9477c5fb 238 Pfam PF12706 Beta-lactamase superfamily domain 2 178 6.7E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10740 5740dce94085aeaf2f035b8e9477c5fb 238 Gene3D G3DSA:3.60.15.10 1 197 1.5E-30 T 23-04-2016 IPR001279 Metallo-beta-lactamase CYCME_RS10740 5740dce94085aeaf2f035b8e9477c5fb 238 PANTHER PTHR13754 1 227 6.6E-57 T 23-04-2016 CYCME_RS07470 4ce3b46a2287c6d6f25b8bdb43880399 198 Pfam PF06930 Protein of unknown function (DUF1282) 14 179 3.3E-30 T 23-04-2016 IPR009698 Protein of unknown function DUF1282 CYCME_RS11975 970aedba5dd1a069d8a8e4a0688ae0a2 568 Gene3D G3DSA:3.40.50.300 3 329 1.7E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11975 970aedba5dd1a069d8a8e4a0688ae0a2 568 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 238 317 7.0E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CYCME_RS11975 970aedba5dd1a069d8a8e4a0688ae0a2 568 SUPERFAMILY SSF52540 3 328 9.84E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11975 970aedba5dd1a069d8a8e4a0688ae0a2 568 Pfam PF13175 AAA ATPase domain 3 52 1.6E-8 T 23-04-2016 CYCME_RS07150 97bd651affbb62b5e8826023043657a9 275 SUPERFAMILY SSF52540 94 268 8.44E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07150 97bd651affbb62b5e8826023043657a9 275 PANTHER PTHR32309:SF13 77 264 6.5E-29 T 23-04-2016 CYCME_RS07150 97bd651affbb62b5e8826023043657a9 275 PANTHER PTHR32309 77 264 6.5E-29 T 23-04-2016 CYCME_RS07150 97bd651affbb62b5e8826023043657a9 275 Gene3D G3DSA:3.40.50.300 90 269 3.4E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS07150 97bd651affbb62b5e8826023043657a9 275 Pfam PF13614 AAA domain 94 229 5.7E-9 T 23-04-2016 IPR025669 AAA domain CYCME_RS02070 61e9ea3b1b4c333ed0fe76a8b0f45534 75 Pfam PF11197 Protein of unknown function (DUF2835) 6 73 1.5E-25 T 23-04-2016 IPR021363 Protein of unknown function DUF2835 CYCME_RS10275 0b84659300c9bf622969442c068cb8ba 84 Pfam PF06099 Phenol hydroxylase subunit 10 58 3.8E-18 T 23-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 CYCME_RS10275 0b84659300c9bf622969442c068cb8ba 84 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 11 50 7.0E-7 T 23-04-2016 IPR010353 Phenol hydroxylase subunit KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 CYCME_RS11390 4ad4f93d6204365f2147ee8a256da16d 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 263 1.3E-55 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CYCME_RS11390 4ad4f93d6204365f2147ee8a256da16d 264 PANTHER PTHR11941 1 262 2.2E-78 T 23-04-2016 CYCME_RS11390 4ad4f93d6204365f2147ee8a256da16d 264 Gene3D G3DSA:3.90.226.10 3 259 4.6E-77 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS11390 4ad4f93d6204365f2147ee8a256da16d 264 SUPERFAMILY SSF52096 4 263 5.14E-80 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CYCME_RS01375 2ac4927193a92ec3a5245ab2323c2e1a 120 Pfam PF04892 VanZ like family 30 106 2.3E-11 T 23-04-2016 IPR006976 VanZ-like CYCME_RS09450 3c67c9ebe5e1c537784f26dbafb508ce 190 Pfam PF12915 Protein of unknown function (DUF3833) 11 170 8.4E-52 T 23-04-2016 IPR024409 Protein of unknown function DUF3833 CYCME_RS02620 471cb1851aa6c49af742a31637ec118f 258 PANTHER PTHR10992:SF768 3 257 2.4E-76 T 23-04-2016 CYCME_RS02620 471cb1851aa6c49af742a31637ec118f 258 PANTHER PTHR10992 3 257 2.4E-76 T 23-04-2016 CYCME_RS02620 471cb1851aa6c49af742a31637ec118f 258 SUPERFAMILY SSF53474 3 257 8.11E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS02620 471cb1851aa6c49af742a31637ec118f 258 Gene3D G3DSA:3.40.50.1820 4 257 3.8E-50 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS02620 471cb1851aa6c49af742a31637ec118f 258 Pfam PF00561 alpha/beta hydrolase fold 16 246 8.4E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS03060 1d6ca471da5392c06675394a152f3200 160 SUPERFAMILY SSF64288 2 159 6.42E-35 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CYCME_RS03060 1d6ca471da5392c06675394a152f3200 160 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 2 160 20.902 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 CYCME_RS03060 1d6ca471da5392c06675394a152f3200 160 Pfam PF04345 Chorismate lyase 2 159 3.2E-25 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 CYCME_RS03060 1d6ca471da5392c06675394a152f3200 160 Gene3D G3DSA:3.40.1410.10 2 158 2.4E-40 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CYCME_RS03060 1d6ca471da5392c06675394a152f3200 160 PANTHER PTHR38683 2 159 1.0E-24 T 23-04-2016 CYCME_RS01975 9f75ea9e2795c8b2d7b014760ddb7691 134 Pfam PF00072 Response regulator receiver domain 12 95 4.4E-6 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CYCME_RS01975 9f75ea9e2795c8b2d7b014760ddb7691 134 SUPERFAMILY SSF52172 3 110 5.28E-8 T 23-04-2016 IPR011006 CheY-like superfamily CYCME_RS01975 9f75ea9e2795c8b2d7b014760ddb7691 134 Gene3D G3DSA:3.40.50.2300 4 95 6.5E-9 T 23-04-2016 CYCME_RS10800 e0a2a54b32c3bf9beabc8593dbe674dd 270 PIRSF PIRSF000388 1 270 1.2E-101 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS10800 e0a2a54b32c3bf9beabc8593dbe674dd 270 PANTHER PTHR20881 8 270 3.6E-136 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS10800 e0a2a54b32c3bf9beabc8593dbe674dd 270 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 270 41.945 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS10800 e0a2a54b32c3bf9beabc8593dbe674dd 270 Pfam PF02548 Ketopantoate hydroxymethyltransferase 9 265 4.4E-108 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS10800 e0a2a54b32c3bf9beabc8593dbe674dd 270 PANTHER PTHR20881:SF3 8 270 3.6E-136 T 23-04-2016 CYCME_RS10800 e0a2a54b32c3bf9beabc8593dbe674dd 270 SUPERFAMILY SSF51621 9 270 1.35E-101 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS10800 e0a2a54b32c3bf9beabc8593dbe674dd 270 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 9 270 2.8E-107 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CYCME_RS10800 e0a2a54b32c3bf9beabc8593dbe674dd 270 Gene3D G3DSA:3.20.20.60 8 270 3.6E-110 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS06830 dcc383c20ec5a8defbb00488b1985272 231 Pfam PF02698 DUF218 domain 61 208 1.5E-10 T 23-04-2016 IPR003848 Domain of unknown function DUF218 CYCME_RS02440 6013b29b8bc10d465b74989d955c504f 141 SUPERFAMILY SSF81324 23 135 1.96E-17 T 23-04-2016 CYCME_RS02440 6013b29b8bc10d465b74989d955c504f 141 Pfam PF07885 Ion channel 54 129 9.4E-13 T 23-04-2016 IPR013099 Potassium channel domain CYCME_RS02440 6013b29b8bc10d465b74989d955c504f 141 Gene3D G3DSA:1.10.287.70 38 136 7.6E-14 T 23-04-2016 CYCME_RS00715 c99d01cbc0b8bdb89c5440674ae97c1f 295 Gene3D G3DSA:1.20.1510.10 16 209 1.1E-52 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CYCME_RS00715 c99d01cbc0b8bdb89c5440674ae97c1f 295 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 289 2.1E-73 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS00715 c99d01cbc0b8bdb89c5440674ae97c1f 295 SUPERFAMILY SSF160240 214 286 8.11E-7 T 23-04-2016 CYCME_RS00715 c99d01cbc0b8bdb89c5440674ae97c1f 295 PANTHER PTHR11562:SF17 2 295 1.0E-85 T 23-04-2016 CYCME_RS00715 c99d01cbc0b8bdb89c5440674ae97c1f 295 SUPERFAMILY SSF161111 14 210 2.62E-52 T 23-04-2016 CYCME_RS00715 c99d01cbc0b8bdb89c5440674ae97c1f 295 Pfam PF01545 Cation efflux family 21 209 5.5E-42 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS00715 c99d01cbc0b8bdb89c5440674ae97c1f 295 PANTHER PTHR11562 2 295 1.0E-85 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS06890 414b48c4e2ec64c3a693bf541516b882 326 Gene3D G3DSA:3.90.550.10 7 266 2.1E-46 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06890 414b48c4e2ec64c3a693bf541516b882 326 PANTHER PTHR22916:SF9 173 320 5.3E-64 T 23-04-2016 CYCME_RS06890 414b48c4e2ec64c3a693bf541516b882 326 PANTHER PTHR22916:SF9 1 150 5.3E-64 T 23-04-2016 CYCME_RS06890 414b48c4e2ec64c3a693bf541516b882 326 Pfam PF00535 Glycosyl transferase family 2 9 136 1.5E-17 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS06890 414b48c4e2ec64c3a693bf541516b882 326 SUPERFAMILY SSF53448 171 296 3.33E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06890 414b48c4e2ec64c3a693bf541516b882 326 SUPERFAMILY SSF53448 6 139 3.33E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06890 414b48c4e2ec64c3a693bf541516b882 326 PANTHER PTHR22916 173 320 5.3E-64 T 23-04-2016 CYCME_RS06890 414b48c4e2ec64c3a693bf541516b882 326 PANTHER PTHR22916 1 150 5.3E-64 T 23-04-2016 CYCME_RS09995 583f6e83b1502482e517861512d32e95 396 TIGRFAM TIGR00261 traB: TraB family protein 14 392 1.6E-97 T 23-04-2016 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal CYCME_RS09995 583f6e83b1502482e517861512d32e95 396 PANTHER PTHR21530 6 309 3.8E-73 T 23-04-2016 CYCME_RS09995 583f6e83b1502482e517861512d32e95 396 PANTHER PTHR21530:SF0 6 309 3.8E-73 T 23-04-2016 CYCME_RS09995 583f6e83b1502482e517861512d32e95 396 Pfam PF01963 TraB family 13 234 1.1E-27 T 23-04-2016 IPR002816 Pheromone shutdown, TraB CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 Gene3D G3DSA:2.40.110.10 127 224 1.1E-30 T 23-04-2016 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 379 2.4E-5 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 5.5E-19 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 Gene3D G3DSA:1.20.140.10 225 378 8.3E-13 T 23-04-2016 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 SUPERFAMILY SSF56645 8 245 6.15E-68 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 PANTHER PTHR10909 13 377 2.5E-86 T 23-04-2016 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 5.9E-25 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 Gene3D G3DSA:1.10.540.10 12 125 1.2E-26 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CYCME_RS05790 69acbcbd67222be0b22013aebaefdfaa 382 PANTHER PTHR10909:SF242 13 377 2.5E-86 T 23-04-2016 CYCME_RS04220 cb1b3be70e092dc16276440167ef2c27 352 SUPERFAMILY SSF50956 106 340 2.75E-32 T 23-04-2016 CYCME_RS04220 cb1b3be70e092dc16276440167ef2c27 352 Gene3D G3DSA:2.120.10.30 109 330 6.7E-10 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CYCME_RS04220 cb1b3be70e092dc16276440167ef2c27 352 Pfam PF06977 SdiA-regulated 93 339 5.2E-86 T 23-04-2016 IPR009722 SdiA-regulated CYCME_RS07110 dd95d27311ced4547374a0f37783223b 166 SUPERFAMILY SSF53098 89 166 1.69E-16 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07110 dd95d27311ced4547374a0f37783223b 166 Gene3D G3DSA:3.30.420.10 89 166 1.2E-18 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07110 dd95d27311ced4547374a0f37783223b 166 Pfam PF00665 Integrase core domain 93 166 1.0E-10 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS07110 dd95d27311ced4547374a0f37783223b 166 PANTHER PTHR32552:SF26 20 166 8.1E-38 T 23-04-2016 CYCME_RS07110 dd95d27311ced4547374a0f37783223b 166 PANTHER PTHR32552 20 166 8.1E-38 T 23-04-2016 CYCME_RS07130 dd95d27311ced4547374a0f37783223b 166 SUPERFAMILY SSF53098 89 166 1.69E-16 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07130 dd95d27311ced4547374a0f37783223b 166 Gene3D G3DSA:3.30.420.10 89 166 1.2E-18 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CYCME_RS07130 dd95d27311ced4547374a0f37783223b 166 Pfam PF00665 Integrase core domain 93 166 1.0E-10 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CYCME_RS07130 dd95d27311ced4547374a0f37783223b 166 PANTHER PTHR32552:SF26 20 166 8.1E-38 T 23-04-2016 CYCME_RS07130 dd95d27311ced4547374a0f37783223b 166 PANTHER PTHR32552 20 166 8.1E-38 T 23-04-2016 CYCME_RS12510 86fbe2ebad6a96477ffcd4dfac62d517 218 SUPERFAMILY SSF55469 5 215 1.83E-51 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CYCME_RS12510 86fbe2ebad6a96477ffcd4dfac62d517 218 PANTHER PTHR23026 1 218 3.9E-37 T 23-04-2016 CYCME_RS12510 86fbe2ebad6a96477ffcd4dfac62d517 218 PANTHER PTHR23026:SF101 1 218 3.9E-37 T 23-04-2016 CYCME_RS12510 86fbe2ebad6a96477ffcd4dfac62d517 218 Gene3D G3DSA:3.40.109.10 3 215 2.7E-51 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CYCME_RS12510 86fbe2ebad6a96477ffcd4dfac62d517 218 Pfam PF00881 Nitroreductase family 10 193 4.1E-23 T 23-04-2016 IPR029479 Nitroreductase CYCME_RS09915 7a8d5051c87dc9aefe795bb40d6f1a56 795 Gene3D G3DSA:3.30.1330.60 672 787 6.3E-4 T 23-04-2016 IPR006665 OmpA-like domain CYCME_RS09915 7a8d5051c87dc9aefe795bb40d6f1a56 795 Pfam PF05359 Domain of Unknown Function (DUF748) 439 579 1.1E-17 T 23-04-2016 IPR008023 Protein of unknown function DUF748 CYCME_RS09915 7a8d5051c87dc9aefe795bb40d6f1a56 795 Pfam PF05359 Domain of Unknown Function (DUF748) 147 276 9.3E-6 T 23-04-2016 IPR008023 Protein of unknown function DUF748 CYCME_RS07800 6a51a69b735264437c859cfc3f017487 296 PANTHER PTHR33608:SF6 32 296 2.5E-84 T 23-04-2016 CYCME_RS07800 6a51a69b735264437c859cfc3f017487 296 PANTHER PTHR33608 32 296 2.5E-84 T 23-04-2016 CYCME_RS07800 6a51a69b735264437c859cfc3f017487 296 SUPERFAMILY SSF53300 87 227 2.22E-6 T 23-04-2016 IPR002035 von Willebrand factor, type A CYCME_RS07800 6a51a69b735264437c859cfc3f017487 296 Pfam PF01882 Protein of unknown function DUF58 51 135 2.8E-20 T 23-04-2016 IPR002881 Domain of unknown function DUF58 CYCME_RS06360 d7b1fd1bc700db8127bfa704c7b2d42c 64 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 2 53 8.9E-5 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CYCME_RS06910 636a7ba66569112b1b7861997c71e12a 114 SUPERFAMILY SSF53756 5 63 6.28E-6 T 23-04-2016 CYCME_RS06795 f3a2f35b68923c4b37559cae3d46a473 109 Pfam PF07027 Protein of unknown function (DUF1318) 20 109 4.9E-29 T 23-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 CYCME_RS06795 f3a2f35b68923c4b37559cae3d46a473 109 PIRSF PIRSF025560 1 109 1.3E-28 T 23-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 CYCME_RS04420 e13280045d9044ce677a82eced17f032 417 Pfam PF01435 Peptidase family M48 207 412 6.4E-43 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CYCME_RS04420 e13280045d9044ce677a82eced17f032 417 Gene3D G3DSA:3.30.2010.10 201 293 7.6E-22 T 23-04-2016 CYCME_RS04420 e13280045d9044ce677a82eced17f032 417 PANTHER PTHR10120:SF24 2 416 1.5E-121 T 23-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 CYCME_RS04420 e13280045d9044ce677a82eced17f032 417 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 26 204 3.1E-50 T 23-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 CYCME_RS04420 e13280045d9044ce677a82eced17f032 417 PANTHER PTHR10120 2 416 1.5E-121 T 23-04-2016 CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 165 4.5E-66 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 SUPERFAMILY SSF54768 11 79 2.09E-23 T 23-04-2016 CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 Gene3D G3DSA:3.30.160.20 12 75 1.2E-29 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 166 33.761 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 160 2.4E-29 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 Gene3D G3DSA:3.30.230.10 80 162 2.1E-31 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 SUPERFAMILY SSF54211 82 162 2.43E-26 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 78 6.7E-29 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 PANTHER PTHR13718 12 167 9.5E-74 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 CYCME_RS03740 25237d7e4d129809ec128cec48161201 169 ProSitePatterns PS00585 Ribosomal protein S5 signature. 31 63 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 SUPERFAMILY SSF53686 4 323 4.98E-87 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 Gene3D G3DSA:3.40.50.1100 43 140 9.6E-39 T 23-04-2016 CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 Gene3D G3DSA:3.40.50.1100 149 325 5.8E-66 T 23-04-2016 CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 Gene3D G3DSA:3.40.50.1100 2 42 5.8E-66 T 23-04-2016 CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 PANTHER PTHR10314 1 331 4.2E-114 T 23-04-2016 CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 308 2.1E-62 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 PANTHER PTHR10314:SF119 1 331 4.2E-114 T 23-04-2016 CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 319 1.9E-110 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CYCME_RS04150 aa5e589a99852996053512f44ce7bff1 342 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 319 2.2E-106 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CYCME_RS07410 48b781657293f84f2f43a46eb8c9dd16 156 SUPERFAMILY SSF89069 5 71 4.71E-8 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CYCME_RS07410 48b781657293f84f2f43a46eb8c9dd16 156 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 6 80 2.4E-12 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CYCME_RS00575 dfa9b7c101e37a37cb66a22a986d8fec 308 Pfam PF03547 Membrane transport protein 160 298 1.4E-14 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CYCME_RS00575 dfa9b7c101e37a37cb66a22a986d8fec 308 PANTHER PTHR36838 1 307 1.1E-18 T 23-04-2016 CYCME_RS10200 a3a6e51a695159fd9ae4eb7645e434a5 86 Gene3D G3DSA:3.10.20.270 1 84 1.1E-37 T 23-04-2016 IPR009355 Toluene-4-monooxygenase system B KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00273 CYCME_RS10200 a3a6e51a695159fd9ae4eb7645e434a5 86 Pfam PF06234 Toluene-4-monooxygenase system protein B (TmoB) 4 83 1.1E-32 T 23-04-2016 IPR009355 Toluene-4-monooxygenase system B KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00273 CYCME_RS10200 a3a6e51a695159fd9ae4eb7645e434a5 86 SUPERFAMILY SSF110814 4 84 1.14E-34 T 23-04-2016 IPR009355 Toluene-4-monooxygenase system B KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00273 CYCME_RS09750 a09ec2243898cec4fe2c3fb90808dd72 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 2.5E-56 T 23-04-2016 IPR018636 Protein of unknown function DUF2058 CYCME_RS11190 61ac06058378143b79e5153ca75e4025 216 Pfam PF01618 MotA/TolQ/ExbB proton channel family 71 189 1.1E-28 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CYCME_RS11190 61ac06058378143b79e5153ca75e4025 216 PANTHER PTHR30625 4 204 4.3E-30 T 23-04-2016 CYCME_RS05830 cd8e301f86a2b90c122036cc22083e0b 252 PANTHER PTHR12318 1 223 2.3E-41 T 23-04-2016 CYCME_RS05830 cd8e301f86a2b90c122036cc22083e0b 252 SUPERFAMILY SSF55811 120 185 3.58E-14 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS05830 cd8e301f86a2b90c122036cc22083e0b 252 SUPERFAMILY SSF55811 3 84 3.58E-14 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS05830 cd8e301f86a2b90c122036cc22083e0b 252 PANTHER PTHR12318:SF0 1 223 2.3E-41 T 23-04-2016 CYCME_RS05830 cd8e301f86a2b90c122036cc22083e0b 252 Gene3D G3DSA:3.90.79.10 3 84 2.0E-17 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS05830 cd8e301f86a2b90c122036cc22083e0b 252 Gene3D G3DSA:3.90.79.10 122 182 2.0E-17 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 Pfam PF13437 HlyD family secretion protein 274 377 5.9E-17 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 Gene3D G3DSA:1.20.1600.10 177 241 4.2E-4 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PANTHER PTHR30386 3 130 4.9E-127 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PANTHER PTHR30386 147 423 4.9E-127 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PANTHER PTHR30386:SF4 3 130 4.9E-127 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PANTHER PTHR30386:SF4 147 423 4.9E-127 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 ProSitePatterns PS00543 HlyD family secretion proteins signature. 387 409 - T 23-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 38 423 5.0E-110 T 23-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 Gene3D G3DSA:2.40.50.100 271 305 1.5E-16 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 Gene3D G3DSA:2.40.50.100 79 109 1.5E-16 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 Pfam PF13533 Biotin-lipoyl like 77 119 1.2E-6 T 23-04-2016 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 366 5.5E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 286 307 5.5E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 87 107 5.5E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 402 422 5.5E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 319 343 5.5E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 45 68 5.5E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS01960 5ddbc3cbc768f15c8698928265210a77 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 387 402 5.5E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS07005 7ecbbfb01781321385d864e07f2fc15d 306 Gene3D G3DSA:3.90.550.10 5 197 3.3E-10 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07005 7ecbbfb01781321385d864e07f2fc15d 306 SUPERFAMILY SSF53448 19 235 9.34E-19 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07005 7ecbbfb01781321385d864e07f2fc15d 306 Pfam PF00535 Glycosyl transferase family 2 20 177 1.9E-8 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS02925 ec020d010cac8c9744df7ccb92e89c4f 244 Pfam PF11906 Protein of unknown function (DUF3426) 99 242 9.3E-25 T 23-04-2016 IPR021834 Protein of unknown function DUF3426 CYCME_RS02925 ec020d010cac8c9744df7ccb92e89c4f 244 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 39 2.8E-7 T 23-04-2016 IPR011723 Zinc finger/thioredoxin putative CYCME_RS11440 0159ae86c32463a7e12b16c33c930300 257 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site CYCME_RS11440 0159ae86c32463a7e12b16c33c930300 257 PANTHER PTHR30433 2 255 4.1E-109 T 23-04-2016 CYCME_RS11440 0159ae86c32463a7e12b16c33c930300 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 211 1.1E-21 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CYCME_RS11440 0159ae86c32463a7e12b16c33c930300 257 PANTHER PTHR30433:SF2 2 255 4.1E-109 T 23-04-2016 IPR022522 Flagellar motor stator, MotA CYCME_RS06685 0d90cf71a46699355201ca5aa7ec62ff 142 SUPERFAMILY SSF103473 5 125 8.24E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain CYCME_RS06685 0d90cf71a46699355201ca5aa7ec62ff 142 Pfam PF03203 MerC mercury resistance protein 9 121 6.1E-29 T 23-04-2016 IPR004891 MerC mercury resistance protein CYCME_RS11260 3846888421e968cfe17b2e0ae3989b8b 196 PIRSF PIRSF016919 1 193 2.0E-61 T 23-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein CYCME_RS11260 3846888421e968cfe17b2e0ae3989b8b 196 Pfam PF04955 HupE / UreJ protein 11 189 1.9E-60 T 23-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 SUPERFAMILY SSF52540 9 243 3.43E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 Pfam PF12848 ABC transporter 230 303 1.0E-12 T 23-04-2016 IPR032781 ABC-transporter extension domain CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 PANTHER PTHR19211 1 554 0.0 T 23-04-2016 CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 Pfam PF00005 ABC transporter 22 191 3.5E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 Pfam PF00005 ABC transporter 340 473 1.2E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.0E-298 T 23-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 SUPERFAMILY SSF52540 301 531 1.12E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 Gene3D G3DSA:3.40.50.300 126 278 1.9E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 Gene3D G3DSA:3.40.50.300 7 93 1.9E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 Gene3D G3DSA:3.40.50.300 322 537 1.4E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 SMART SM00382 31 236 2.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 SMART SM00382 348 524 9.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CYCME_RS04250 a3d2350983204173a6f8035f4e96dd73 555 PANTHER PTHR19211:SF7 1 554 0.0 T 23-04-2016 CYCME_RS06325 4ba26bb0e159b76d82b31c9629be364a 216 PANTHER PTHR12714 92 206 4.1E-15 T 23-04-2016 CYCME_RS06325 4ba26bb0e159b76d82b31c9629be364a 216 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 95 181 4.5E-8 T 23-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 CYCME_RS06560 2ee7684aaa816ae520bfd403a56ebf94 209 Pfam PF05275 Copper resistance protein B precursor (CopB) 2 209 1.1E-87 T 23-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 CYCME_RS04105 a3ab6a8972372c0cb9c34f8e4cd9dd62 226 Gene3D G3DSA:3.90.1490.10 149 220 7.8E-15 T 23-04-2016 CYCME_RS04105 a3ab6a8972372c0cb9c34f8e4cd9dd62 226 SUPERFAMILY SSF52402 1 220 4.79E-61 T 23-04-2016 CYCME_RS04105 a3ab6a8972372c0cb9c34f8e4cd9dd62 226 Pfam PF01902 Diphthamide synthase 5 211 2.5E-28 T 23-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 CYCME_RS04105 a3ab6a8972372c0cb9c34f8e4cd9dd62 226 Gene3D G3DSA:3.40.50.620 1 145 3.1E-30 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYCME_RS07825 7ef774ad86d89bf127a103ddf24d645e 228 Pfam PF13489 Methyltransferase domain 46 201 9.7E-12 T 23-04-2016 CYCME_RS07825 7ef774ad86d89bf127a103ddf24d645e 228 SUPERFAMILY SSF53335 39 208 7.64E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS07825 7ef774ad86d89bf127a103ddf24d645e 228 Gene3D G3DSA:3.40.50.150 40 207 7.3E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS08870 d7e9db044cb5d004196e49e2daffc488 172 Pfam PF07295 Zinc-ribbon containing domain 28 170 3.5E-47 T 23-04-2016 IPR009912 Zinc-ribbon containing domain CYCME_RS02970 3c7667a340e784e639a0c4058fdbbbfb 120 Pfam PF09361 Phasin protein 7 99 5.9E-11 T 23-04-2016 IPR018968 Phasin CYCME_RS01575 d6fcbb651d53c80e0a142270fecdcab1 198 Pfam PF14334 Domain of unknown function (DUF4390) 39 194 1.8E-37 T 23-04-2016 IPR025500 Protein of unknown function DUF4390 CYCME_RS08425 73d9df3a5e43f7bf15f5ec67aee43057 208 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 193 2.3E-34 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CYCME_RS08425 73d9df3a5e43f7bf15f5ec67aee43057 208 PANTHER PTHR30625 7 204 7.2E-54 T 23-04-2016 CYCME_RS02180 25fa5b381b8a28c88c3d860d33b1ded0 181 Gene3D G3DSA:2.60.120.10 1 178 4.5E-85 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS02180 25fa5b381b8a28c88c3d860d33b1ded0 181 PANTHER PTHR21047:SF2 1 178 1.9E-79 T 23-04-2016 CYCME_RS02180 25fa5b381b8a28c88c3d860d33b1ded0 181 PANTHER PTHR21047 1 178 1.9E-79 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CYCME_RS02180 25fa5b381b8a28c88c3d860d33b1ded0 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 180 3.0E-74 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CYCME_RS02180 25fa5b381b8a28c88c3d860d33b1ded0 181 SUPERFAMILY SSF51182 1 178 5.16E-81 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS02180 25fa5b381b8a28c88c3d860d33b1ded0 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 2.0E-85 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CYCME_RS02180 25fa5b381b8a28c88c3d860d33b1ded0 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 1.2E-75 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CYCME_RS07210 d578bf7f811e7f1369557c8ce2ffe49d 268 SUPERFAMILY SSF53335 25 266 4.38E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS07210 d578bf7f811e7f1369557c8ce2ffe49d 268 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 16 268 33.454 T 23-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CYCME_RS07210 d578bf7f811e7f1369557c8ce2ffe49d 268 PANTHER PTHR36112:SF1 45 268 8.9E-66 T 23-04-2016 CYCME_RS07210 d578bf7f811e7f1369557c8ce2ffe49d 268 Gene3D G3DSA:3.40.50.150 75 266 4.8E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS07210 d578bf7f811e7f1369557c8ce2ffe49d 268 Pfam PF04445 Putative SAM-dependent methyltransferase 45 266 6.9E-80 T 23-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CYCME_RS07210 d578bf7f811e7f1369557c8ce2ffe49d 268 PANTHER PTHR36112 45 268 8.9E-66 T 23-04-2016 CYCME_RS10835 b8cb5d57975c0717de363227dd078737 159 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 6.4E-43 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CYCME_RS10835 b8cb5d57975c0717de363227dd078737 159 PANTHER PTHR33254 1 158 2.4E-72 T 23-04-2016 CYCME_RS10835 b8cb5d57975c0717de363227dd078737 159 SUPERFAMILY SSF89562 2 158 1.57E-48 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CYCME_RS10835 b8cb5d57975c0717de363227dd078737 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.7E-63 T 23-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CYCME_RS10835 b8cb5d57975c0717de363227dd078737 159 PANTHER PTHR33254:SF4 1 158 2.4E-72 T 23-04-2016 CYCME_RS10835 b8cb5d57975c0717de363227dd078737 159 Gene3D G3DSA:3.50.30.40 2 158 4.4E-50 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 SUPERFAMILY SSF53474 9 275 1.18E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 Gene3D G3DSA:3.40.50.1820 8 278 6.0E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 8.3E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 8.3E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 8.3E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 8.3E-24 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 PANTHER PTHR10992 13 192 7.6E-51 T 23-04-2016 CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 PANTHER PTHR10992 217 277 7.6E-51 T 23-04-2016 CYCME_RS07915 b0f336a49b54388f6bdecf4d666732a7 278 Pfam PF00561 alpha/beta hydrolase fold 31 262 3.3E-23 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11815 8e671c30325da451bed0bb0a2d0320dd 167 SMART SM00900 84 164 1.2E-6 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CYCME_RS11815 8e671c30325da451bed0bb0a2d0320dd 167 Pfam PF04205 FMN-binding domain 84 161 8.1E-9 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 157 173 6.4E-17 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 118 135 6.4E-17 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 Pfam PF01979 Amidohydrolase family 1 209 1.8E-42 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 ProSitePatterns PS00145 Urease active site. 140 156 - T 23-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 PANTHER PTHR22642 143 210 2.7E-113 T 23-04-2016 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 PANTHER PTHR22642 2 119 2.7E-113 T 23-04-2016 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 PANTHER PTHR22642:SF7 143 210 2.7E-113 T 23-04-2016 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 PANTHER PTHR22642:SF7 2 119 2.7E-113 T 23-04-2016 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 Gene3D G3DSA:3.20.20.140 1 209 6.5E-130 T 23-04-2016 CYCME_RS12635 4064bcffccb38ed21efde4ea8682117f 210 SUPERFAMILY SSF51556 1 210 9.98E-117 T 23-04-2016 IPR032466 Metal-dependent hydrolase CYCME_RS12145 c2f3f9a1cf60e557b9713de1d7b5bf18 225 PANTHER PTHR31223:SF1 4 222 1.1E-84 T 23-04-2016 CYCME_RS12145 c2f3f9a1cf60e557b9713de1d7b5bf18 225 SUPERFAMILY SSF102405 6 203 7.94E-59 T 23-04-2016 CYCME_RS12145 c2f3f9a1cf60e557b9713de1d7b5bf18 225 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 31 203 3.8E-43 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CYCME_RS12145 c2f3f9a1cf60e557b9713de1d7b5bf18 225 PANTHER PTHR31223 4 222 1.1E-84 T 23-04-2016 CYCME_RS12145 c2f3f9a1cf60e557b9713de1d7b5bf18 225 Pfam PF03641 Possible lysine decarboxylase 73 202 1.8E-35 T 23-04-2016 IPR031100 LOG family CYCME_RS12145 c2f3f9a1cf60e557b9713de1d7b5bf18 225 Gene3D G3DSA:3.40.50.450 10 212 1.2E-62 T 23-04-2016 CYCME_RS11935 11de3be8f73c89142825a950cf6538f1 61 Pfam PF04324 BFD-like [2Fe-2S] binding domain 10 59 1.0E-8 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain CYCME_RS02520 a63a4488643a90dbeffb7785bcb24738 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 2.2E-29 T 23-04-2016 IPR009921 Domain of unknown function DUF1456 CYCME_RS02520 a63a4488643a90dbeffb7785bcb24738 157 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 1.6E-24 T 23-04-2016 IPR009921 Domain of unknown function DUF1456 CYCME_RS02520 a63a4488643a90dbeffb7785bcb24738 157 PANTHER PTHR37805:SF1 1 155 1.1E-66 T 23-04-2016 CYCME_RS02520 a63a4488643a90dbeffb7785bcb24738 157 PANTHER PTHR37805 1 155 1.1E-66 T 23-04-2016 CYCME_RS01260 8ed2925c257863aa0f14fd5dd7fb8c29 186 SUPERFAMILY SSF81342 11 182 1.33E-29 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CYCME_RS01260 8ed2925c257863aa0f14fd5dd7fb8c29 186 Gene3D G3DSA:1.20.950.20 83 174 6.4E-4 T 23-04-2016 CYCME_RS01260 8ed2925c257863aa0f14fd5dd7fb8c29 186 PANTHER PTHR30529 1 186 1.9E-44 T 23-04-2016 CYCME_RS01260 8ed2925c257863aa0f14fd5dd7fb8c29 186 Pfam PF01292 Prokaryotic cytochrome b561 11 182 2.2E-25 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CYCME_RS01260 8ed2925c257863aa0f14fd5dd7fb8c29 186 PANTHER PTHR30529:SF5 1 186 1.9E-44 T 23-04-2016 CYCME_RS02310 48cf54747cb71fdaeedf42462e95cca9 503 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 497 1.0E-45 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS02310 48cf54747cb71fdaeedf42462e95cca9 503 PANTHER PTHR10799 223 495 5.3E-27 T 23-04-2016 CYCME_RS02310 48cf54747cb71fdaeedf42462e95cca9 503 SMART SM00267 329 500 5.3E-56 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS02310 48cf54747cb71fdaeedf42462e95cca9 503 PANTHER PTHR10799:SF750 223 495 5.3E-27 T 23-04-2016 CYCME_RS02310 48cf54747cb71fdaeedf42462e95cca9 503 Gene3D G3DSA:3.30.70.270 342 497 1.1E-51 T 23-04-2016 CYCME_RS02310 48cf54747cb71fdaeedf42462e95cca9 503 SUPERFAMILY SSF55073 345 497 1.33E-46 T 23-04-2016 IPR029787 Nucleotide cyclase CYCME_RS02310 48cf54747cb71fdaeedf42462e95cca9 503 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 496 3.9E-43 T 23-04-2016 IPR000160 GGDEF domain CYCME_RS06895 be6ad2f454943922d1a2c3f37e774eec 310 SUPERFAMILY SSF51735 2 309 1.37E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06895 be6ad2f454943922d1a2c3f37e774eec 310 Gene3D G3DSA:3.40.50.720 2 170 6.2E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06895 be6ad2f454943922d1a2c3f37e774eec 310 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 303 6.9E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06895 be6ad2f454943922d1a2c3f37e774eec 310 Gene3D G3DSA:3.90.25.10 171 309 1.5E-54 T 23-04-2016 CYCME_RS06895 be6ad2f454943922d1a2c3f37e774eec 310 PANTHER PTHR10366:SF399 4 308 6.9E-155 T 23-04-2016 CYCME_RS06895 be6ad2f454943922d1a2c3f37e774eec 310 PANTHER PTHR10366 4 308 6.9E-155 T 23-04-2016 CYCME_RS08325 3c703d071d43d1901162c93adbd1bbbc 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.462 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CYCME_RS08325 3c703d071d43d1901162c93adbd1bbbc 61 PANTHER PTHR34984 1 55 3.3E-29 T 23-04-2016 CYCME_RS08325 3c703d071d43d1901162c93adbd1bbbc 61 Pfam PF02599 Global regulator protein family 1 53 1.6E-27 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CYCME_RS08325 3c703d071d43d1901162c93adbd1bbbc 61 SUPERFAMILY SSF117130 1 54 7.32E-21 T 23-04-2016 CYCME_RS08325 3c703d071d43d1901162c93adbd1bbbc 61 PANTHER PTHR34984:SF1 1 55 3.3E-29 T 23-04-2016 CYCME_RS08325 3c703d071d43d1901162c93adbd1bbbc 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 6.3E-29 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CYCME_RS08325 3c703d071d43d1901162c93adbd1bbbc 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-16 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CYCME_RS00865 f77baafb9bd67043fe8797f0aff77d9a 349 PANTHER PTHR21716 10 346 3.6E-71 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CYCME_RS00865 f77baafb9bd67043fe8797f0aff77d9a 349 Pfam PF01594 Domain of unknown function DUF20 9 335 2.5E-65 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CYCME_RS08155 04b7b8179c067193bf3e4b6485117a0a 152 PANTHER PTHR34821 1 152 3.7E-19 T 23-04-2016 CYCME_RS08155 04b7b8179c067193bf3e4b6485117a0a 152 Pfam PF04657 Putative inner membrane exporter, YdcZ 10 147 6.8E-28 T 23-04-2016 IPR006750 Putative inner membrane exporter, YdcZ CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 Gene3D G3DSA:3.40.50.720 3 257 4.5E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PANTHER PTHR24322 12 186 1.2E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.3E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 SUPERFAMILY SSF51735 6 257 3.82E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12490 bac8140a31d0db5ec7c146a0def485ac 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 4.0E-52 T 23-04-2016 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 Gene3D G3DSA:3.30.930.10 15 320 8.6E-68 T 23-04-2016 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 33 43 5.1E-9 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 96 113 5.1E-9 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 5.1E-9 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 78 91 5.1E-9 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 PANTHER PTHR22594:SF7 14 323 1.6E-107 T 23-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 16 321 1.4E-40 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 SUPERFAMILY SSF55681 14 322 1.02E-69 T 23-04-2016 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 PANTHER PTHR22594 14 323 1.6E-107 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CYCME_RS04640 0d7902a6bcd890e060bf7c587d8fba8c 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 18 319 4.7E-111 T 23-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CYCME_RS10940 a15b646a23ae123dd2bc1b702b73199c 368 PANTHER PTHR33529:SF2 4 354 8.7E-76 T 23-04-2016 CYCME_RS10940 a15b646a23ae123dd2bc1b702b73199c 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 11 350 1.3E-62 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 CYCME_RS10940 a15b646a23ae123dd2bc1b702b73199c 368 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 8 351 9.6E-103 T 23-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CYCME_RS10940 a15b646a23ae123dd2bc1b702b73199c 368 PANTHER PTHR33529 4 354 8.7E-76 T 23-04-2016 CYCME_RS07010 29ca8dc24074445a1602e5df56ea7fa2 295 SUPERFAMILY SSF53448 52 263 4.28E-7 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07010 29ca8dc24074445a1602e5df56ea7fa2 295 Gene3D G3DSA:3.90.550.10 72 208 2.0E-4 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS01485 21b377b9e22e64e04cbfc237b66861bc 120 Pfam PF07386 Protein of unknown function (DUF1499) 4 111 1.1E-28 T 23-04-2016 IPR010865 Protein of unknown function DUF1499 CYCME_RS01485 21b377b9e22e64e04cbfc237b66861bc 120 PIRSF PIRSF026426 1 120 1.8E-40 T 23-04-2016 IPR010865 Protein of unknown function DUF1499 CYCME_RS01485 21b377b9e22e64e04cbfc237b66861bc 120 PANTHER PTHR34801:SF2 1 120 1.8E-28 T 23-04-2016 CYCME_RS01485 21b377b9e22e64e04cbfc237b66861bc 120 PANTHER PTHR34801 1 120 1.8E-28 T 23-04-2016 CYCME_RS12475 f2867ee1d9de2e7d3d3cfcb41d1ae926 302 Pfam PF00892 EamA-like transporter family 157 290 3.2E-20 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS12475 f2867ee1d9de2e7d3d3cfcb41d1ae926 302 Pfam PF00892 EamA-like transporter family 7 141 2.6E-23 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS12475 f2867ee1d9de2e7d3d3cfcb41d1ae926 302 SUPERFAMILY SSF103481 216 293 8.89E-11 T 23-04-2016 CYCME_RS12475 f2867ee1d9de2e7d3d3cfcb41d1ae926 302 PANTHER PTHR12715 1 301 5.3E-56 T 23-04-2016 CYCME_RS12475 f2867ee1d9de2e7d3d3cfcb41d1ae926 302 SUPERFAMILY SSF103481 42 143 2.09E-15 T 23-04-2016 CYCME_RS03905 163b704b63c4a7216610cb2cf465d4d6 174 Pfam PF07295 Zinc-ribbon containing domain 24 167 3.9E-50 T 23-04-2016 IPR009912 Zinc-ribbon containing domain CYCME_RS04905 6e194dc011d6426c80dd53b09afc1a94 164 Pfam PF04355 SmpA / OmlA family 48 114 1.1E-23 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CYCME_RS04905 6e194dc011d6426c80dd53b09afc1a94 164 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 5 124 26.121 T 23-04-2016 IPR026592 Outer membrane protein assembly factor BamE CYCME_RS04905 6e194dc011d6426c80dd53b09afc1a94 164 PANTHER PTHR37482 1 126 8.6E-29 T 23-04-2016 CYCME_RS04905 6e194dc011d6426c80dd53b09afc1a94 164 PANTHER PTHR37482:SF1 1 126 8.6E-29 T 23-04-2016 CYCME_RS00605 1749b5553dd7523a186f694d4bb2a88d 219 Pfam PF06912 Protein of unknown function (DUF1275) 13 209 2.3E-31 T 23-04-2016 IPR010699 Protein of unknown function DUF1275 CYCME_RS02395 e7ecb5ebb0de521fdbd933b3d57710ea 78 Gene3D G3DSA:1.20.120.20 3 75 4.6E-4 T 23-04-2016 CYCME_RS05165 921d2ef43da07df6078142a26dbc9355 130 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 7 128 9.6E-36 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CYCME_RS05165 921d2ef43da07df6078142a26dbc9355 130 PANTHER PTHR30435:SF12 2 130 4.1E-36 T 23-04-2016 CYCME_RS05165 921d2ef43da07df6078142a26dbc9355 130 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CYCME_RS05165 921d2ef43da07df6078142a26dbc9355 130 PANTHER PTHR30435 2 130 4.1E-36 T 23-04-2016 CYCME_RS05165 921d2ef43da07df6078142a26dbc9355 130 PIRSF PIRSF002889 1 130 1.4E-41 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CYCME_RS05165 921d2ef43da07df6078142a26dbc9355 130 Pfam PF00460 Flagella basal body rod protein 11 39 1.3E-7 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CYCME_RS00505 91782c0208c96c77ce5924c9bad19365 152 Gene3D G3DSA:1.10.1510.10 8 95 6.8E-32 T 23-04-2016 CYCME_RS00505 91782c0208c96c77ce5924c9bad19365 152 SUPERFAMILY SSF89095 8 152 2.14E-42 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CYCME_RS00505 91782c0208c96c77ce5924c9bad19365 152 PANTHER PTHR28055:SF1 5 152 3.2E-52 T 23-04-2016 CYCME_RS00505 91782c0208c96c77ce5924c9bad19365 152 Pfam PF09424 Yqey-like protein 10 151 3.8E-55 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial CYCME_RS00505 91782c0208c96c77ce5924c9bad19365 152 Gene3D G3DSA:1.10.10.410 96 152 3.6E-23 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CYCME_RS00505 91782c0208c96c77ce5924c9bad19365 152 PANTHER PTHR28055 5 152 3.2E-52 T 23-04-2016 CYCME_RS07355 6f235662dddf23944a749bc9137e0bf9 209 SUPERFAMILY SSF51366 5 205 2.2E-60 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CYCME_RS07355 6f235662dddf23944a749bc9137e0bf9 209 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 5 207 39.035 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 CYCME_RS07355 6f235662dddf23944a749bc9137e0bf9 209 PANTHER PTHR22854 4 206 5.0E-66 T 23-04-2016 CYCME_RS07355 6f235662dddf23944a749bc9137e0bf9 209 Gene3D G3DSA:3.20.20.70 4 206 7.6E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS07355 6f235662dddf23944a749bc9137e0bf9 209 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 202 1.9E-52 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 CYCME_RS07355 6f235662dddf23944a749bc9137e0bf9 209 PANTHER PTHR22854:SF6 4 206 5.0E-66 T 23-04-2016 CYCME_RS11790 8f955518008a48929e5858ab72477a6e 168 PANTHER PTHR10681 30 162 5.9E-21 T 23-04-2016 CYCME_RS11790 8f955518008a48929e5858ab72477a6e 168 PANTHER PTHR10681:SF68 30 162 5.9E-21 T 23-04-2016 CYCME_RS11790 8f955518008a48929e5858ab72477a6e 168 Pfam PF00578 AhpC/TSA family 30 145 2.5E-22 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CYCME_RS11790 8f955518008a48929e5858ab72477a6e 168 Gene3D G3DSA:3.40.30.10 5 167 3.8E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS11790 8f955518008a48929e5858ab72477a6e 168 SUPERFAMILY SSF52833 31 167 5.18E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS03990 bbb767377e0e08703f5b3cb92a6b90e7 96 Gene3D G3DSA:3.30.160.100 1 95 1.3E-35 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CYCME_RS03990 bbb767377e0e08703f5b3cb92a6b90e7 96 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 92 5.3E-28 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CYCME_RS03990 bbb767377e0e08703f5b3cb92a6b90e7 96 SUPERFAMILY SSF69754 1 96 3.14E-34 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CYCME_RS03990 bbb767377e0e08703f5b3cb92a6b90e7 96 PANTHER PTHR33231 1 96 1.3E-33 T 23-04-2016 CYCME_RS03990 bbb767377e0e08703f5b3cb92a6b90e7 96 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 3.7E-32 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CYCME_RS03975 9f67977675cdb77ef21533ec54f936b6 451 SUPERFAMILY SSF111283 17 450 2.75E-125 T 23-04-2016 CYCME_RS03975 9f67977675cdb77ef21533ec54f936b6 451 PANTHER PTHR30624:SF1 10 451 2.1E-157 T 23-04-2016 CYCME_RS03975 9f67977675cdb77ef21533ec54f936b6 451 PANTHER PTHR30624 10 451 2.1E-157 T 23-04-2016 CYCME_RS03975 9f67977675cdb77ef21533ec54f936b6 451 Pfam PF01523 Putative modulator of DNA gyrase 37 328 1.1E-51 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CYCME_RS10255 b0d6569159fb2e51860aca7a54f1f191 119 Pfam PF04663 Phenol hydroxylase conserved region 14 79 7.2E-30 T 23-04-2016 IPR006756 Phenol hydroxylase KEGG: 00361+1.14.13.7|KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|UniPathway: UPA00728 CYCME_RS07085 ba630c13d447a469a982c2efba7d0f6a 699 SUPERFAMILY SSF51445 309 442 7.6E-27 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CYCME_RS07085 ba630c13d447a469a982c2efba7d0f6a 699 SUPERFAMILY SSF51445 82 261 7.6E-27 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CYCME_RS07085 ba630c13d447a469a982c2efba7d0f6a 699 Gene3D G3DSA:3.20.20.80 306 462 2.4E-46 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CYCME_RS07085 ba630c13d447a469a982c2efba7d0f6a 699 Gene3D G3DSA:3.20.20.80 78 258 2.4E-46 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 SUPERFAMILY SSF52283 1 136 6.12E-44 T 23-04-2016 CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 SUPERFAMILY SSF52283 304 331 6.12E-44 T 23-04-2016 CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 1.7E-39 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 SUPERFAMILY SSF51735 136 302 6.13E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 347 4.4E-58 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 Gene3D G3DSA:3.40.50.1770 3 179 4.1E-52 T 23-04-2016 CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 SMART SM01002 148 296 1.3E-46 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 SMART SM01003 4 136 8.9E-55 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 PANTHER PTHR10160 1 347 5.5E-107 T 23-04-2016 CYCME_RS06215 991670968eeae8bdb7c141735b30828d 351 Gene3D G3DSA:3.40.50.720 180 302 2.7E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS02045 cb87c4cb6a85c24978bcd244042b1ccb 279 Pfam PF01618 MotA/TolQ/ExbB proton channel family 106 217 3.3E-19 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CYCME_RS02045 cb87c4cb6a85c24978bcd244042b1ccb 279 PANTHER PTHR30433 2 274 4.8E-41 T 23-04-2016 CYCME_RS02045 cb87c4cb6a85c24978bcd244042b1ccb 279 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 189 206 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site CYCME_RS02760 5a2ddc23575c96076649581f4ffdbbfa 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.373 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 CYCME_RS02760 5a2ddc23575c96076649581f4ffdbbfa 160 PANTHER PTHR22960 1 158 2.0E-88 T 23-04-2016 CYCME_RS02760 5a2ddc23575c96076649581f4ffdbbfa 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.1E-60 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 CYCME_RS02760 5a2ddc23575c96076649581f4ffdbbfa 160 Gene3D G3DSA:3.30.70.640 3 158 1.0E-67 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CYCME_RS02760 5a2ddc23575c96076649581f4ffdbbfa 160 Pfam PF01967 MoaC family 15 150 4.9E-54 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CYCME_RS02760 5a2ddc23575c96076649581f4ffdbbfa 160 SUPERFAMILY SSF55040 11 155 1.1E-58 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CYCME_RS05155 00f0be21dbe30eadd23233aba5643856 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 97 7.0E-21 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CYCME_RS05155 00f0be21dbe30eadd23233aba5643856 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 6.8E-15 T 23-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CYCME_RS05155 00f0be21dbe30eadd23233aba5643856 107 SUPERFAMILY SSF101498 16 97 5.49E-16 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CYCME_RS07560 0c66680c9c26c58fd7b3f4db9c3b70df 191 PANTHER PTHR30353 20 187 8.8E-25 T 23-04-2016 IPR032818 DedA family CYCME_RS07560 0c66680c9c26c58fd7b3f4db9c3b70df 191 Pfam PF09335 SNARE associated Golgi protein 52 156 1.5E-14 T 23-04-2016 IPR032816 SNARE associated Golgi protein CYCME_RS07560 0c66680c9c26c58fd7b3f4db9c3b70df 191 PANTHER PTHR30353:SF4 20 187 8.8E-25 T 23-04-2016 CYCME_RS07660 af0a04ed85f973dd33e2338a8dfd0079 169 PANTHER PTHR35089 5 161 2.2E-30 T 23-04-2016 CYCME_RS07660 af0a04ed85f973dd33e2338a8dfd0079 169 SMART SM00935 13 166 1.1E-44 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 CYCME_RS07660 af0a04ed85f973dd33e2338a8dfd0079 169 PANTHER PTHR35089:SF1 5 161 2.2E-30 T 23-04-2016 CYCME_RS07660 af0a04ed85f973dd33e2338a8dfd0079 169 Gene3D G3DSA:3.30.910.20 15 61 6.1E-28 T 23-04-2016 CYCME_RS07660 af0a04ed85f973dd33e2338a8dfd0079 169 Gene3D G3DSA:3.30.910.20 99 165 6.1E-28 T 23-04-2016 CYCME_RS07660 af0a04ed85f973dd33e2338a8dfd0079 169 Pfam PF03938 Outer membrane protein (OmpH-like) 12 165 3.2E-29 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 CYCME_RS07660 af0a04ed85f973dd33e2338a8dfd0079 169 SUPERFAMILY SSF111384 24 165 4.58E-30 T 23-04-2016 IPR024930 Skp domain CYCME_RS07660 af0a04ed85f973dd33e2338a8dfd0079 169 PIRSF PIRSF002094 1 169 1.1E-50 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 CYCME_RS01460 ecff7d305e166c249c72770f41f041e9 460 Pfam PF00939 Sodium:sulfate symporter transmembrane region 29 456 1.3E-71 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CYCME_RS01460 ecff7d305e166c249c72770f41f041e9 460 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 455 1.0E-80 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CYCME_RS01460 ecff7d305e166c249c72770f41f041e9 460 PANTHER PTHR10283:SF82 1 456 9.0E-149 T 23-04-2016 CYCME_RS01460 ecff7d305e166c249c72770f41f041e9 460 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 409 425 - T 23-04-2016 IPR031312 Sodium/sulphate symporter, conserved site CYCME_RS01460 ecff7d305e166c249c72770f41f041e9 460 PANTHER PTHR10283 1 456 9.0E-149 T 23-04-2016 CYCME_RS08780 2ef60be2180aa664fa033ab6b7ba1fb5 129 SUPERFAMILY SSF46785 3 118 7.44E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08780 2ef60be2180aa664fa033ab6b7ba1fb5 129 Gene3D G3DSA:1.10.10.10 3 75 3.2E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS08780 2ef60be2180aa664fa033ab6b7ba1fb5 129 PANTHER PTHR34134:SF1 1 128 1.7E-22 T 23-04-2016 CYCME_RS08780 2ef60be2180aa664fa033ab6b7ba1fb5 129 Pfam PF03965 Penicillinase repressor 3 118 2.1E-20 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CYCME_RS08780 2ef60be2180aa664fa033ab6b7ba1fb5 129 PANTHER PTHR34134 1 128 1.7E-22 T 23-04-2016 CYCME_RS02770 0ba556780bd5455a1d8a7efda46765da 150 PANTHER PTHR23404 29 128 6.1E-30 T 23-04-2016 CYCME_RS02770 0ba556780bd5455a1d8a7efda46765da 150 Pfam PF02391 MoaE protein 20 120 6.6E-31 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS02770 0ba556780bd5455a1d8a7efda46765da 150 Gene3D G3DSA:3.90.1170.40 1 138 5.3E-44 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS02770 0ba556780bd5455a1d8a7efda46765da 150 PANTHER PTHR23404:SF2 29 128 6.1E-30 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS02770 0ba556780bd5455a1d8a7efda46765da 150 SUPERFAMILY SSF54690 11 135 2.35E-41 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CYCME_RS04480 b97528e09a93ce36817122f0b998b8e4 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 61 1.5E-20 T 23-04-2016 IPR019201 Protein of unknown function DUF2065 CYCME_RS00390 c79618c54621fb8fabeb8d341db168c0 184 PANTHER PTHR33219 1 184 3.0E-40 T 23-04-2016 CYCME_RS00390 c79618c54621fb8fabeb8d341db168c0 184 PANTHER PTHR33219:SF5 1 184 3.0E-40 T 23-04-2016 CYCME_RS00390 c79618c54621fb8fabeb8d341db168c0 184 Pfam PF02325 YGGT family 107 176 1.4E-21 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 CYCME_RS00390 c79618c54621fb8fabeb8d341db168c0 184 Pfam PF02325 YGGT family 16 84 1.9E-12 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 CYCME_RS01425 8d6ac93fa96661683431f2cf7cc827ad 111 Gene3D G3DSA:3.20.160.10 4 110 1.1E-49 T 23-04-2016 CYCME_RS01425 8d6ac93fa96661683431f2cf7cc827ad 111 Pfam PF08888 HopJ type III effector protein 4 107 1.3E-46 T 23-04-2016 IPR014984 HopJ type III effector protein CYCME_RS06790 7801b89fbe378fbd0cb68ab22511e37a 206 Gene3D G3DSA:2.40.70.10 73 198 1.9E-40 T 23-04-2016 IPR021109 Aspartic peptidase domain CYCME_RS06790 7801b89fbe378fbd0cb68ab22511e37a 206 Pfam PF05618 Putative ATP-dependant zinc protease 74 202 6.6E-31 T 23-04-2016 CYCME_RS06790 7801b89fbe378fbd0cb68ab22511e37a 206 SUPERFAMILY SSF50630 73 204 3.43E-37 T 23-04-2016 IPR021109 Aspartic peptidase domain CYCME_RS06790 7801b89fbe378fbd0cb68ab22511e37a 206 PANTHER PTHR38037 73 201 1.6E-28 T 23-04-2016 CYCME_RS09840 d9fc082630175ec0a7b24089f7e70d39 412 Pfam PF07044 Protein of unknown function (DUF1329) 28 408 1.8E-79 T 23-04-2016 IPR010752 Protein of unknown function DUF1329 CYCME_RS09840 d9fc082630175ec0a7b24089f7e70d39 412 Gene3D G3DSA:2.50.20.10 106 259 3.4E-47 T 23-04-2016 CYCME_RS09840 d9fc082630175ec0a7b24089f7e70d39 412 Gene3D G3DSA:2.50.20.10 299 408 3.4E-47 T 23-04-2016 CYCME_RS09780 b3b921d7f0fe447e903ee693f317658f 654 Gene3D G3DSA:3.40.50.300 229 434 1.7E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS09780 b3b921d7f0fe447e903ee693f317658f 654 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 231 625 1.5E-93 T 23-04-2016 IPR018647 Domain of unknown function DUF2075 CYCME_RS11250 02030f70cec2151d763be220931d50e3 434 PIRSF PIRSF005850 1 434 3.6E-142 T 23-04-2016 IPR019219 Protein of unknown function DUF2130 CYCME_RS11250 02030f70cec2151d763be220931d50e3 434 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 163 420 1.4E-97 T 23-04-2016 IPR019219 Protein of unknown function DUF2130 CYCME_RS10185 6e1ceb1e8caf5623b83ff1a2f9c0c6e6 330 SUPERFAMILY SSF47240 4 328 5.54E-87 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS10185 6e1ceb1e8caf5623b83ff1a2f9c0c6e6 330 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 56 277 1.5E-59 T 23-04-2016 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 CYCME_RS10185 6e1ceb1e8caf5623b83ff1a2f9c0c6e6 330 PIRSF PIRSF000040 1 330 4.8E-98 T 23-04-2016 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 CYCME_RS10185 6e1ceb1e8caf5623b83ff1a2f9c0c6e6 330 Gene3D G3DSA:1.10.620.20 9 303 6.5E-87 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CYCME_RS11205 98fd229d152d59bbb70bc98c7f66798b 275 Gene3D G3DSA:3.30.1150.10 161 268 5.3E-20 T 23-04-2016 CYCME_RS11205 98fd229d152d59bbb70bc98c7f66798b 275 SUPERFAMILY SSF74653 167 269 6.41E-20 T 23-04-2016 CYCME_RS11205 98fd229d152d59bbb70bc98c7f66798b 275 PANTHER PTHR33446 179 269 5.9E-13 T 23-04-2016 CYCME_RS11205 98fd229d152d59bbb70bc98c7f66798b 275 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 191 269 1.3E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CYCME_RS11205 98fd229d152d59bbb70bc98c7f66798b 275 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 193 268 5.7E-18 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CYCME_RS00410 e5ca814b2d28a871d36699da5c2a9807 359 PANTHER PTHR21225 1 359 3.8E-218 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CYCME_RS00410 e5ca814b2d28a871d36699da5c2a9807 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 350 1.5E-160 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CYCME_RS00410 e5ca814b2d28a871d36699da5c2a9807 359 PIRSF PIRSF001361 1 353 7.5E-159 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CYCME_RS00410 e5ca814b2d28a871d36699da5c2a9807 359 Pfam PF00793 DAHP synthetase I family 39 339 2.4E-101 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CYCME_RS00410 e5ca814b2d28a871d36699da5c2a9807 359 SUPERFAMILY SSF51569 8 349 2.2E-135 T 23-04-2016 CYCME_RS00410 e5ca814b2d28a871d36699da5c2a9807 359 Gene3D G3DSA:3.20.20.70 10 352 5.3E-152 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CYCME_RS10195 3de1df097cbccb2e5c5b6e41eac2010a 112 Pfam PF00355 Rieske [2Fe-2S] domain 5 89 2.0E-13 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS10195 3de1df097cbccb2e5c5b6e41eac2010a 112 SUPERFAMILY SSF50022 5 105 2.62E-24 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS10195 3de1df097cbccb2e5c5b6e41eac2010a 112 Gene3D G3DSA:2.102.10.10 4 105 7.2E-25 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04200 9f7f3c3257044db618bf175ddf90419f 142 Gene3D G3DSA:2.102.10.10 1 139 1.2E-23 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04200 9f7f3c3257044db618bf175ddf90419f 142 SUPERFAMILY SSF50022 48 139 1.7E-21 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS04200 9f7f3c3257044db618bf175ddf90419f 142 PRINTS PR00162 Rieske 2Fe-2S subunit signature 82 93 3.2E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CYCME_RS04200 9f7f3c3257044db618bf175ddf90419f 142 PRINTS PR00162 Rieske 2Fe-2S subunit signature 113 125 3.2E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CYCME_RS04200 9f7f3c3257044db618bf175ddf90419f 142 PRINTS PR00162 Rieske 2Fe-2S subunit signature 101 113 3.2E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CYCME_RS04200 9f7f3c3257044db618bf175ddf90419f 142 Pfam PF00355 Rieske [2Fe-2S] domain 52 125 1.7E-15 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07190 decc5bc8f4ea4d53469855bd6c173684 114 SMART SM00749 51 114 2.8E-5 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria CYCME_RS07190 decc5bc8f4ea4d53469855bd6c173684 114 PANTHER PTHR34606 47 113 1.5E-13 T 23-04-2016 CYCME_RS07190 decc5bc8f4ea4d53469855bd6c173684 114 Pfam PF04972 BON domain 48 113 3.8E-17 T 23-04-2016 IPR007055 BON domain CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 Pfam PF00463 Isocitrate lyase family 318 399 1.0E-10 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 Pfam PF00463 Isocitrate lyase family 448 531 1.1E-11 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 Pfam PF00463 Isocitrate lyase family 99 270 2.0E-19 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 PANTHER PTHR21631 97 145 5.7E-69 T 23-04-2016 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 PANTHER PTHR21631 169 267 5.7E-69 T 23-04-2016 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 PANTHER PTHR21631 447 532 5.7E-69 T 23-04-2016 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 PANTHER PTHR21631 318 410 5.7E-69 T 23-04-2016 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 SUPERFAMILY SSF51621 17 393 2.69E-117 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 SUPERFAMILY SSF51621 430 515 2.69E-117 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 Gene3D G3DSA:3.20.20.60 304 393 1.7E-130 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 Gene3D G3DSA:3.20.20.60 5 271 1.7E-130 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS06175 415c733760d2f79a11e5023011a924b5 532 Gene3D G3DSA:3.20.20.60 430 514 1.7E-130 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CYCME_RS09460 47f6bcdc3af0a7d77619ff1ac07565b1 233 Gene3D G3DSA:2.60.120.10 150 220 2.6E-13 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS09460 47f6bcdc3af0a7d77619ff1ac07565b1 233 SUPERFAMILY SSF51182 121 226 5.01E-17 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS09460 47f6bcdc3af0a7d77619ff1ac07565b1 233 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 230 7.1E-42 T 23-04-2016 IPR012807 Anti-sigma factor ChrR, putative CYCME_RS09460 47f6bcdc3af0a7d77619ff1ac07565b1 233 Pfam PF12973 ChrR Cupin-like domain 127 210 2.4E-14 T 23-04-2016 IPR025979 ChrR-like cupin domain CYCME_RS03380 d48cc799218e2ed242148968d615b625 577 Pfam PF02543 Carbamoyltransferase N-terminus 3 352 3.4E-57 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 CYCME_RS03380 d48cc799218e2ed242148968d615b625 577 Pfam PF16861 Carbamoyltransferase C-terminus 404 573 4.8E-68 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal CYCME_RS03380 d48cc799218e2ed242148968d615b625 577 PANTHER PTHR34847 2 577 2.8E-138 T 23-04-2016 CYCME_RS03380 d48cc799218e2ed242148968d615b625 577 SUPERFAMILY SSF53067 253 359 5.61E-15 T 23-04-2016 CYCME_RS03380 d48cc799218e2ed242148968d615b625 577 SUPERFAMILY SSF53067 130 216 5.61E-15 T 23-04-2016 CYCME_RS03380 d48cc799218e2ed242148968d615b625 577 SUPERFAMILY SSF53067 13 79 5.61E-15 T 23-04-2016 CYCME_RS02740 9d4dd40f7e54dba9ad87a284d40f07d2 237 SUPERFAMILY SSF141371 26 98 7.65E-5 T 23-04-2016 CYCME_RS02740 9d4dd40f7e54dba9ad87a284d40f07d2 237 Gene3D G3DSA:2.40.10.220 4 100 8.9E-4 T 23-04-2016 CYCME_RS02740 9d4dd40f7e54dba9ad87a284d40f07d2 237 Pfam PF07238 PilZ domain 3 100 3.7E-5 T 23-04-2016 IPR009875 PilZ domain GO:0035438 CYCME_RS06520 998a0cbcd9a6b26b8bae8b24f387305d 129 SUPERFAMILY SSF46785 1 119 1.45E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS06520 998a0cbcd9a6b26b8bae8b24f387305d 129 Gene3D G3DSA:1.10.10.10 1 76 3.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS06520 998a0cbcd9a6b26b8bae8b24f387305d 129 PANTHER PTHR34134:SF1 1 128 4.8E-27 T 23-04-2016 CYCME_RS06520 998a0cbcd9a6b26b8bae8b24f387305d 129 PANTHER PTHR34134 1 128 4.8E-27 T 23-04-2016 CYCME_RS06520 998a0cbcd9a6b26b8bae8b24f387305d 129 PIRSF PIRSF019455 1 128 6.2E-23 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CYCME_RS06520 998a0cbcd9a6b26b8bae8b24f387305d 129 Pfam PF03965 Penicillinase repressor 3 117 1.6E-24 T 23-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CYCME_RS10505 aa2625043bcc663db1676bc0615f7350 318 Pfam PF07805 HipA-like N-terminal domain 146 224 2.1E-21 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 CYCME_RS10505 aa2625043bcc663db1676bc0615f7350 318 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 5 103 2.3E-30 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 CYCME_RS10505 aa2625043bcc663db1676bc0615f7350 318 PANTHER PTHR37419:SF3 5 318 2.9E-76 T 23-04-2016 CYCME_RS10505 aa2625043bcc663db1676bc0615f7350 318 PANTHER PTHR37419 5 318 2.9E-76 T 23-04-2016 CYCME_RS10505 aa2625043bcc663db1676bc0615f7350 318 Pfam PF13657 HipA N-terminal domain 5 103 1.7E-28 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 CYCME_RS10505 aa2625043bcc663db1676bc0615f7350 318 Pfam PF07804 HipA-like C-terminal domain 234 318 2.7E-24 T 23-04-2016 IPR012893 HipA-like, C-terminal CYCME_RS08685 fe0f7b5db351166fc12dc68cdc0a356c 420 PANTHER PTHR39084 5 420 1.3E-60 T 23-04-2016 CYCME_RS08685 fe0f7b5db351166fc12dc68cdc0a356c 420 Pfam PF13194 Domain of unknown function (DUF4010) 186 394 9.5E-64 T 23-04-2016 IPR025105 Domain of unknown function DUF4010 CYCME_RS08685 fe0f7b5db351166fc12dc68cdc0a356c 420 Pfam PF02308 MgtC family 13 138 1.2E-18 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CYCME_RS06800 62b01c51491c788a53179bcb6da8c621 67 Pfam PF13617 YnbE-like lipoprotein 12 65 1.0E-26 T 23-04-2016 IPR025985 YnbE-like lipoprotein CYCME_RS06800 62b01c51491c788a53179bcb6da8c621 67 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 22 67 4.0E-16 T 23-04-2016 CYCME_RS11255 a7f4668e7b93481b9741fae257396aa2 113 Pfam PF14358 Domain of unknown function (DUF4405) 5 58 9.4E-7 T 23-04-2016 IPR025517 Domain of unknown function DUF4405 CYCME_RS01240 402e0d14797b8486fe57da241e629fd9 180 PANTHER PTHR41534 13 180 1.5E-21 T 23-04-2016 CYCME_RS01240 402e0d14797b8486fe57da241e629fd9 180 SUPERFAMILY SSF54427 15 180 2.16E-33 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS01240 402e0d14797b8486fe57da241e629fd9 180 Gene3D G3DSA:3.10.450.50 10 180 2.3E-46 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS01240 402e0d14797b8486fe57da241e629fd9 180 Pfam PF00866 Ring hydroxylating beta subunit 29 171 9.0E-34 T 23-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CYCME_RS01240 402e0d14797b8486fe57da241e629fd9 180 PANTHER PTHR41534:SF2 13 180 1.5E-21 T 23-04-2016 CYCME_RS09070 59ac3e3ae97644d8321650e9af72f9e7 377 PANTHER PTHR35806 1 377 3.3E-187 T 23-04-2016 CYCME_RS09070 59ac3e3ae97644d8321650e9af72f9e7 377 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 20 371 4.5E-165 T 23-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CYCME_RS09070 59ac3e3ae97644d8321650e9af72f9e7 377 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 375 5.4E-156 T 23-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CYCME_RS09070 59ac3e3ae97644d8321650e9af72f9e7 377 PIRSF PIRSF015658 1 377 5.8E-172 T 23-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CYCME_RS00635 d6d0462cc14999b00d3f323fcfbef5b1 239 Pfam PF04402 Protein of unknown function (DUF541) 41 214 1.4E-17 T 23-04-2016 IPR007497 Protein of unknown function DUF541 CYCME_RS00635 d6d0462cc14999b00d3f323fcfbef5b1 239 PIRSF PIRSF029033 1 239 3.5E-109 T 23-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein CYCME_RS06945 fc6a1c4a7f15ab3cd6a1afaf67f5ce25 320 Pfam PF12762 ISXO2-like transposase domain 143 287 6.8E-16 T 23-04-2016 IPR024445 ISXO2-like transposase domain CYCME_RS06945 fc6a1c4a7f15ab3cd6a1afaf67f5ce25 320 SMART SM01126 141 295 7.2E-37 T 23-04-2016 IPR024445 ISXO2-like transposase domain CYCME_RS03265 e4450b702be27c2a49b57ba48e67ddd2 295 SUPERFAMILY SSF103481 48 140 9.94E-6 T 23-04-2016 CYCME_RS03265 e4450b702be27c2a49b57ba48e67ddd2 295 Pfam PF00892 EamA-like transporter family 9 137 1.1E-6 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CYCME_RS11000 f65fab1667ee47ff48640adc4013f0e5 272 Gene3D G3DSA:3.40.50.150 89 187 3.2E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS11000 f65fab1667ee47ff48640adc4013f0e5 272 Pfam PF13489 Methyltransferase domain 90 186 5.8E-11 T 23-04-2016 CYCME_RS11000 f65fab1667ee47ff48640adc4013f0e5 272 SUPERFAMILY SSF53335 67 211 2.63E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS07430 4a259eae23d02179f06ce0eeb09165d3 78 PANTHER PTHR39585:SF1 1 74 8.1E-17 T 23-04-2016 CYCME_RS07430 4a259eae23d02179f06ce0eeb09165d3 78 SUPERFAMILY SSF109910 3 75 4.58E-18 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase CYCME_RS07430 4a259eae23d02179f06ce0eeb09165d3 78 Gene3D G3DSA:1.10.150.250 3 74 2.6E-20 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase CYCME_RS07430 4a259eae23d02179f06ce0eeb09165d3 78 PANTHER PTHR39585 1 74 8.1E-17 T 23-04-2016 CYCME_RS07430 4a259eae23d02179f06ce0eeb09165d3 78 Pfam PF03937 Flavinator of succinate dehydrogenase 5 74 6.8E-21 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase CYCME_RS05965 91a9d94e6dae51f4021349fcd0db2a25 517 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CYCME_RS05965 91a9d94e6dae51f4021349fcd0db2a25 517 Gene3D G3DSA:3.40.50.150 17 230 2.6E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS05965 91a9d94e6dae51f4021349fcd0db2a25 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 13 29 3.6E-6 T 23-04-2016 CYCME_RS05965 91a9d94e6dae51f4021349fcd0db2a25 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 3.6E-6 T 23-04-2016 CYCME_RS05965 91a9d94e6dae51f4021349fcd0db2a25 517 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 40 54 3.6E-6 T 23-04-2016 CYCME_RS05965 91a9d94e6dae51f4021349fcd0db2a25 517 SUPERFAMILY SSF53335 9 227 6.81E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS06730 4394bdcaf26607672cf06fa3c8202701 136 SUPERFAMILY SSF161084 9 133 1.19E-14 T 23-04-2016 CYCME_RS06730 4394bdcaf26607672cf06fa3c8202701 136 Gene3D G3DSA:1.20.120.550 53 135 5.9E-6 T 23-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CYCME_RS06730 4394bdcaf26607672cf06fa3c8202701 136 Pfam PF01124 MAPEG family 7 135 1.0E-13 T 23-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CYCME_RS04245 0ae112bfe041c2546cd1cd9c5bd8fc8c 115 Pfam PF11196 Protein of unknown function (DUF2834) 11 107 3.6E-31 T 23-04-2016 IPR021362 Protein of unknown function DUF2834 CYCME_RS07760 28028b05a0f03fda62664429ff371478 204 SUPERFAMILY SSF161111 17 200 4.32E-30 T 23-04-2016 CYCME_RS07760 28028b05a0f03fda62664429ff371478 204 PANTHER PTHR11562 11 200 6.9E-13 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS07760 28028b05a0f03fda62664429ff371478 204 Pfam PF01545 Cation efflux family 23 200 2.5E-13 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CYCME_RS07760 28028b05a0f03fda62664429ff371478 204 Gene3D G3DSA:1.20.1510.10 19 200 2.8E-22 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CYCME_RS02515 6e1b3d7ea84b8362b95bffde353e34b5 193 PANTHER PTHR12992 29 187 4.2E-49 T 23-04-2016 CYCME_RS02515 6e1b3d7ea84b8362b95bffde353e34b5 193 Gene3D G3DSA:3.90.79.10 22 187 1.3E-41 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS02515 6e1b3d7ea84b8362b95bffde353e34b5 193 SUPERFAMILY SSF55811 26 180 1.49E-32 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CYCME_RS02515 6e1b3d7ea84b8362b95bffde353e34b5 193 Pfam PF00293 NUDIX domain 29 110 5.1E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.5E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.5E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 Gene3D G3DSA:3.40.50.720 4 256 5.8E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PANTHER PTHR24322 11 140 2.7E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PANTHER PTHR24322 156 186 2.7E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.7E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.7E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.7E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 8.7E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.7E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.7E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 SUPERFAMILY SSF51735 5 256 1.58E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CYCME_RS12440 657ddf13ceb7226b6eb73dc1fdf4803a 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 256 4.2E-47 T 23-04-2016 CYCME_RS00855 5e0456a4881e7f50bc7d6230f1b234b5 358 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 19 251 3.5E-70 T 23-04-2016 IPR018642 Protein of unknown function DUF2066 CYCME_RS00640 cc0ac268f856d0d39dc4c06179dafc44 95 SUPERFAMILY SSF47240 5 93 4.94E-25 T 23-04-2016 IPR009078 Ferritin-like superfamily CYCME_RS00640 cc0ac268f856d0d39dc4c06179dafc44 95 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 6 93 1.0E-40 T 23-04-2016 IPR030907 Ferritin-like protein CYCME_RS00640 cc0ac268f856d0d39dc4c06179dafc44 95 Gene3D G3DSA:1.20.1260.10 26 73 3.4E-14 T 23-04-2016 IPR012347 Ferritin-related CYCME_RS11175 c31522035fd9d158777646dcea612b56 196 Pfam PF11845 Protein of unknown function (DUF3365) 13 183 2.2E-27 T 23-04-2016 IPR021796 Protein of unknown function DUF3365 CYCME_RS07910 c8ef70f7af0104bedba04db005e8e323 108 Gene3D G3DSA:2.102.10.10 3 102 1.1E-24 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07910 c8ef70f7af0104bedba04db005e8e323 108 SUPERFAMILY SSF50022 5 101 3.93E-25 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS07910 c8ef70f7af0104bedba04db005e8e323 108 Pfam PF00355 Rieske [2Fe-2S] domain 5 91 3.1E-16 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CYCME_RS00550 c4409af40d40743e4c7d3df96e600689 380 Gene3D G3DSA:2.40.50.100 175 203 1.3E-12 T 23-04-2016 CYCME_RS00550 c4409af40d40743e4c7d3df96e600689 380 Gene3D G3DSA:2.40.50.100 56 89 1.3E-12 T 23-04-2016 CYCME_RS00550 c4409af40d40743e4c7d3df96e600689 380 SUPERFAMILY SSF111369 48 261 1.31E-14 T 23-04-2016 CYCME_RS00550 c4409af40d40743e4c7d3df96e600689 380 PANTHER PTHR30469 1 380 2.5E-41 T 23-04-2016 CYCME_RS00550 c4409af40d40743e4c7d3df96e600689 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 286 7.8E-17 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CYCME_RS00550 c4409af40d40743e4c7d3df96e600689 380 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 9.3E-6 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS00550 c4409af40d40743e4c7d3df96e600689 380 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 368 380 9.3E-6 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CYCME_RS00550 c4409af40d40743e4c7d3df96e600689 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 363 1.9E-42 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CYCME_RS06540 6c15731d14444fae20223f9ac95d3875 962 Pfam PF01526 Tn3 transposase DDE domain 571 957 1.6E-133 T 23-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CYCME_RS06540 6c15731d14444fae20223f9ac95d3875 962 Pfam PF13700 Domain of unknown function (DUF4158) 6 168 1.2E-48 T 23-04-2016 IPR025296 Domain of unknown function DUF4158 CYCME_RS08665 a8718e7d5b19acf950f0474a0702ebdc 111 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 9 100 3.2E-22 T 23-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CYCME_RS08665 a8718e7d5b19acf950f0474a0702ebdc 111 PANTHER PTHR34703:SF1 1 100 9.0E-27 T 23-04-2016 CYCME_RS08665 a8718e7d5b19acf950f0474a0702ebdc 111 Pfam PF03334 Na+/H+ antiporter subunit 10 89 5.5E-25 T 23-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CYCME_RS08665 a8718e7d5b19acf950f0474a0702ebdc 111 PANTHER PTHR34703 1 100 9.0E-27 T 23-04-2016 CYCME_RS06000 77e92aeef7970026f07152c1e8eb9b3c 278 Pfam PF02515 CoA-transferase family III 5 249 8.0E-35 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CYCME_RS06000 77e92aeef7970026f07152c1e8eb9b3c 278 SUPERFAMILY SSF89796 1 275 1.83E-48 T 23-04-2016 IPR023606 CoA-transferase family III domain CYCME_RS06000 77e92aeef7970026f07152c1e8eb9b3c 278 Gene3D G3DSA:3.40.50.10540 3 270 5.8E-43 T 23-04-2016 IPR023606 CoA-transferase family III domain CYCME_RS04190 e90b8bb315834a488aa1ff60ff20246e 176 Pfam PF03929 PepSY-associated TM region 11 166 3.3E-12 T 23-04-2016 IPR005625 PepSY-associated TM protein CYCME_RS08465 6899c31bb4526c902c696a0edb516f57 235 Pfam PF12119 Protein of unknown function (DUF3581) 1 216 1.3E-90 T 23-04-2016 IPR021974 Protein of unknown function DUF3581 CYCME_RS01355 0b0bd49b80d54bb80e94340cc30205be 170 Gene3D G3DSA:3.40.50.2020 9 148 6.8E-37 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS01355 0b0bd49b80d54bb80e94340cc30205be 170 Pfam PF00156 Phosphoribosyl transferase domain 14 147 2.9E-18 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CYCME_RS01355 0b0bd49b80d54bb80e94340cc30205be 170 PANTHER PTHR11608 1 166 1.3E-53 T 23-04-2016 CYCME_RS01355 0b0bd49b80d54bb80e94340cc30205be 170 SUPERFAMILY SSF53271 3 155 1.7E-33 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CYCME_RS04045 9ad88b1596ed8154787eee4bb8092f8e 99 SUPERFAMILY SSF52091 1 98 5.1E-14 T 23-04-2016 IPR002645 STAS domain CYCME_RS04045 9ad88b1596ed8154787eee4bb8092f8e 99 Gene3D G3DSA:3.30.750.24 5 98 7.7E-11 T 23-04-2016 IPR002645 STAS domain CYCME_RS04045 9ad88b1596ed8154787eee4bb8092f8e 99 Pfam PF13466 STAS domain 15 93 4.1E-14 T 23-04-2016 IPR002645 STAS domain CYCME_RS08940 3ccd2ffe03f88541d44fd29ecc458c26 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 8 44 1.1E-12 T 23-04-2016 IPR008621 Cbb3-type cytochrome oxidase component CYCME_RS06980 73dd077ff835becae31181c57fb2d81b 258 Pfam PF01757 Acyltransferase family 17 238 7.8E-14 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 CYCME_RS11375 35a08a1277e7f4355d4d9dd7e39ee519 104 Pfam PF01883 Domain of unknown function DUF59 4 74 1.9E-13 T 23-04-2016 IPR002744 Domain of unknown function DUF59 CYCME_RS11375 35a08a1277e7f4355d4d9dd7e39ee519 104 SUPERFAMILY SSF117916 2 97 3.92E-22 T 23-04-2016 CYCME_RS10190 c08a4942ed212fd1d6621bbc854316ff 102 Pfam PF02406 MmoB/DmpM family 11 96 1.5E-26 T 23-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CYCME_RS10190 c08a4942ed212fd1d6621bbc854316ff 102 Gene3D G3DSA:3.90.56.10 6 100 3.8E-34 T 23-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CYCME_RS10190 c08a4942ed212fd1d6621bbc854316ff 102 SUPERFAMILY SSF56029 7 99 3.53E-28 T 23-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CYCME_RS10190 c08a4942ed212fd1d6621bbc854316ff 102 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 19 102 7.0E-23 T 23-04-2016 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 CYCME_RS11510 68cc011c82473c4ecae4d8c141ca466e 259 PANTHER PTHR16950 1 259 5.8E-34 T 23-04-2016 CYCME_RS11510 68cc011c82473c4ecae4d8c141ca466e 259 Pfam PF02535 ZIP Zinc transporter 8 91 2.5E-7 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CYCME_RS11510 68cc011c82473c4ecae4d8c141ca466e 259 Pfam PF02535 ZIP Zinc transporter 96 253 7.5E-30 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CYCME_RS08540 1501af2d1237933bbb08f81220922f12 107 Pfam PF13473 Cupredoxin-like domain 5 106 2.1E-24 T 23-04-2016 IPR028096 EfeO-type cupredoxin-like domain CYCME_RS08540 1501af2d1237933bbb08f81220922f12 107 Gene3D G3DSA:2.60.40.420 6 107 1.3E-5 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS08540 1501af2d1237933bbb08f81220922f12 107 SUPERFAMILY SSF49503 7 107 5.66E-11 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS09990 88477d9357cf8b9b67e464936761f9af 313 Pfam PF08907 Domain of unknown function (DUF1853) 13 296 9.3E-83 T 23-04-2016 IPR015003 Protein of unknown function DUF1853 CYCME_RS10010 72d61028eaac86c3e3af983ef1a448eb 348 Pfam PF03747 ADP-ribosylglycohydrolase 12 325 7.9E-48 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 CYCME_RS10010 72d61028eaac86c3e3af983ef1a448eb 348 SUPERFAMILY SSF101478 4 230 4.97E-50 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 CYCME_RS10010 72d61028eaac86c3e3af983ef1a448eb 348 SUPERFAMILY SSF101478 265 346 4.97E-50 T 23-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 CYCME_RS10010 72d61028eaac86c3e3af983ef1a448eb 348 PANTHER PTHR16222 6 348 1.3E-33 T 23-04-2016 CYCME_RS08120 3f623f65cd2580eaddd9801cf838a8d4 75 Pfam PF09012 FeoC like transcriptional regulator 2 70 9.7E-21 T 23-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC CYCME_RS08120 3f623f65cd2580eaddd9801cf838a8d4 75 SUPERFAMILY SSF46785 1 73 3.03E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01725 c08fb52e7bb561315c8c5b81e095b552 946 PANTHER PTHR38760 28 813 1.7E-155 T 23-04-2016 CYCME_RS01725 c08fb52e7bb561315c8c5b81e095b552 946 Pfam PF01295 Adenylate cyclase, class-I 252 787 2.4E-92 T 23-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CYCME_RS01725 c08fb52e7bb561315c8c5b81e095b552 946 PIRSF PIRSF001444 27 837 1.0E-171 T 23-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CYCME_RS01725 c08fb52e7bb561315c8c5b81e095b552 946 Gene3D G3DSA:3.30.460.10 110 187 7.3E-4 T 23-04-2016 CYCME_RS01725 c08fb52e7bb561315c8c5b81e095b552 946 Pfam PF12633 Adenylate cyclase NT domain 31 225 4.2E-70 T 23-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CYCME_RS12150 43c1419aa5b73601acd7f69cd95110d2 113 Pfam PF11191 Protein of unknown function (DUF2782) 28 113 3.8E-29 T 23-04-2016 IPR021357 Protein of unknown function DUF2782 CYCME_RS08960 33ec8634f8828cbde366382a34c1e913 158 Pfam PF05751 FixH 14 152 1.1E-36 T 23-04-2016 IPR008620 Nitrogen fixation protein FixH CYCME_RS09245 205e647400704a799da966d24dbcbc81 96 Pfam PF06305 Protein of unknown function (DUF1049) 23 84 4.3E-14 T 23-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CYCME_RS11995 529373762126fbca78af045eb705b12e 383 Pfam PF14088 Domain of unknown function (DUF4268) 235 369 1.4E-34 T 23-04-2016 IPR025364 Domain of unknown function DUF4268 CYCME_RS09465 e2481b3d400694aa02d32e936f786e19 167 Pfam PF16036 Chalcone isomerase-like 49 158 5.6E-7 T 23-04-2016 IPR016087 Chalcone isomerase GO:0016872 CYCME_RS05605 b48d0e827414b5bd5f9b7ff5bedc1b78 220 SUPERFAMILY SSF51182 5 132 6.48E-35 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS05605 b48d0e827414b5bd5f9b7ff5bedc1b78 220 Gene3D G3DSA:2.60.120.10 130 219 1.2E-28 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS05605 b48d0e827414b5bd5f9b7ff5bedc1b78 220 Gene3D G3DSA:2.60.120.10 18 129 1.1E-38 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CYCME_RS05605 b48d0e827414b5bd5f9b7ff5bedc1b78 220 Pfam PF12973 ChrR Cupin-like domain 21 111 1.5E-35 T 23-04-2016 IPR025979 ChrR-like cupin domain CYCME_RS05605 b48d0e827414b5bd5f9b7ff5bedc1b78 220 Pfam PF12973 ChrR Cupin-like domain 131 217 1.5E-34 T 23-04-2016 IPR025979 ChrR-like cupin domain CYCME_RS05605 b48d0e827414b5bd5f9b7ff5bedc1b78 220 SUPERFAMILY SSF51182 120 220 2.32E-26 T 23-04-2016 IPR011051 RmlC-like cupin domain CYCME_RS03130 343d57d09f1f096e0f14f96f1bbe344f 324 PANTHER PTHR35457:SF1 59 205 4.1E-58 T 23-04-2016 CYCME_RS03130 343d57d09f1f096e0f14f96f1bbe344f 324 PANTHER PTHR35457:SF1 1 43 4.1E-58 T 23-04-2016 CYCME_RS03130 343d57d09f1f096e0f14f96f1bbe344f 324 PANTHER PTHR35457:SF1 229 319 4.1E-58 T 23-04-2016 CYCME_RS03130 343d57d09f1f096e0f14f96f1bbe344f 324 PANTHER PTHR35457 59 205 4.1E-58 T 23-04-2016 CYCME_RS03130 343d57d09f1f096e0f14f96f1bbe344f 324 PANTHER PTHR35457 1 43 4.1E-58 T 23-04-2016 CYCME_RS03130 343d57d09f1f096e0f14f96f1bbe344f 324 PANTHER PTHR35457 229 319 4.1E-58 T 23-04-2016 CYCME_RS03130 343d57d09f1f096e0f14f96f1bbe344f 324 Pfam PF02628 Cytochrome oxidase assembly protein 4 313 1.6E-78 T 23-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 CYCME_RS03220 cd4be03c1110062419e8e67524dad1f4 285 Pfam PF14238 Domain of unknown function (DUF4340) 66 209 9.0E-12 T 23-04-2016 IPR025641 Domain of unknown function DUF4340 CYCME_RS12415 7ccd4bf531c1002d60aba67add89f66d 161 SUPERFAMILY SSF54427 7 160 1.66E-47 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS12415 7ccd4bf531c1002d60aba67add89f66d 161 Pfam PF13577 SnoaL-like domain 8 144 8.2E-15 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain CYCME_RS12415 7ccd4bf531c1002d60aba67add89f66d 161 Gene3D G3DSA:3.10.450.50 4 154 1.1E-29 T 23-04-2016 IPR032710 NTF2-like domain CYCME_RS08045 2e5b474343a43bfbc9381c85514f9935 325 SUPERFAMILY SSF161098 108 306 1.53E-10 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS08045 2e5b474343a43bfbc9381c85514f9935 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 323 1.9E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS08045 2e5b474343a43bfbc9381c85514f9935 325 PANTHER PTHR30465 93 324 2.0E-87 T 23-04-2016 CYCME_RS08045 2e5b474343a43bfbc9381c85514f9935 325 PANTHER PTHR30465 1 75 2.0E-87 T 23-04-2016 CYCME_RS08045 2e5b474343a43bfbc9381c85514f9935 325 PANTHER PTHR30465:SF24 93 324 2.0E-87 T 23-04-2016 CYCME_RS08045 2e5b474343a43bfbc9381c85514f9935 325 PANTHER PTHR30465:SF24 1 75 2.0E-87 T 23-04-2016 CYCME_RS08045 2e5b474343a43bfbc9381c85514f9935 325 Gene3D G3DSA:1.10.3720.10 105 311 5.5E-9 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CYCME_RS03210 d952d91a22c548366637b2a9f16658d7 228 Pfam PF07556 Protein of unknown function (DUF1538) 6 227 2.3E-71 T 23-04-2016 IPR011435 Protein of unknown function DUF1538 CYCME_RS00350 b224adf85cc323ae5bf85d4156d7a9d1 174 Pfam PF14341 PilX N-terminal 12 62 2.5E-12 T 23-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain CYCME_RS00350 b224adf85cc323ae5bf85d4156d7a9d1 174 Pfam PF13681 Type IV pilus assembly protein PilX C-term 97 173 2.9E-14 T 23-04-2016 IPR025205 PilX/PilW C-terminal domain CYCME_RS11400 64863bbf299e3539d77d07fdf47e8a82 269 SUPERFAMILY SSF53474 13 265 3.75E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS11400 64863bbf299e3539d77d07fdf47e8a82 269 PANTHER PTHR10992 14 266 1.3E-36 T 23-04-2016 CYCME_RS11400 64863bbf299e3539d77d07fdf47e8a82 269 Pfam PF12146 Serine aminopeptidase, S33 34 252 9.6E-10 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 CYCME_RS11400 64863bbf299e3539d77d07fdf47e8a82 269 Gene3D G3DSA:3.40.50.1820 11 266 1.3E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS11400 64863bbf299e3539d77d07fdf47e8a82 269 PANTHER PTHR10992:SF854 14 266 1.3E-36 T 23-04-2016 CYCME_RS00560 8a549665857e631e7b198becad75e16a 407 PANTHER PTHR30572 1 401 1.9E-62 T 23-04-2016 CYCME_RS00560 8a549665857e631e7b198becad75e16a 407 Pfam PF12704 MacB-like periplasmic core domain 26 224 3.8E-29 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CYCME_RS00560 8a549665857e631e7b198becad75e16a 407 Pfam PF02687 FtsX-like permease family 281 393 4.3E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CYCME_RS02745 6af4a5b1b1108be83606be34eee13e78 65 SUPERFAMILY SSF51316 5 60 6.28E-11 T 23-04-2016 IPR011057 Mss4-like CYCME_RS02745 6af4a5b1b1108be83606be34eee13e78 65 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 5 59 2.5E-11 T 23-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 CYCME_RS02745 6af4a5b1b1108be83606be34eee13e78 65 Gene3D G3DSA:3.90.1590.10 9 59 1.9E-10 T 23-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 CYCME_RS03030 19e645b0a1f214689f87e9d6369f0ddb 288 PANTHER PTHR30636 1 288 4.9E-98 T 23-04-2016 CYCME_RS03030 19e645b0a1f214689f87e9d6369f0ddb 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 3.7E-84 T 23-04-2016 IPR005229 Conserved hypothetical protein CHP00255 CYCME_RS03030 19e645b0a1f214689f87e9d6369f0ddb 288 Pfam PF03755 YicC-like family, N-terminal region 2 153 2.0E-41 T 23-04-2016 IPR013527 YicC-like, N-terminal CYCME_RS03030 19e645b0a1f214689f87e9d6369f0ddb 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 8.0E-36 T 23-04-2016 IPR013551 Domain of unknown function DUF1732 CYCME_RS11950 4d8e55f5321ef69b0b60cf514d40c247 304 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 13 241 2.6E-43 T 23-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CYCME_RS05425 463593cbf028e70000c0732eb62f6654 118 Pfam PF07238 PilZ domain 15 106 1.7E-8 T 23-04-2016 IPR009875 PilZ domain GO:0035438 CYCME_RS06880 c8ed067dcdfef20c3b6a66c2efada0c0 175 Gene3D G3DSA:2.160.10.10 70 170 7.8E-21 T 23-04-2016 CYCME_RS06880 c8ed067dcdfef20c3b6a66c2efada0c0 175 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 120 148 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CYCME_RS06880 c8ed067dcdfef20c3b6a66c2efada0c0 175 PANTHER PTHR23416:SF55 48 168 5.0E-20 T 23-04-2016 CYCME_RS06880 c8ed067dcdfef20c3b6a66c2efada0c0 175 SUPERFAMILY SSF51161 49 162 1.66E-27 T 23-04-2016 IPR011004 Trimeric LpxA-like CYCME_RS06880 c8ed067dcdfef20c3b6a66c2efada0c0 175 PANTHER PTHR23416 48 168 5.0E-20 T 23-04-2016 CYCME_RS12320 d9a9b7df7dedfa9c29fa316962431f68 120 Pfam PF03899 ATP synthase I chain 6 105 2.6E-8 T 23-04-2016 IPR005598 ATP synthase protein I CYCME_RS03875 3735e060ae82a7fba8be6d4f55211ccc 320 Pfam PF02562 PhoH-like protein 112 315 1.9E-94 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 CYCME_RS03875 3735e060ae82a7fba8be6d4f55211ccc 320 PANTHER PTHR30473:SF1 2 317 2.1E-165 T 23-04-2016 CYCME_RS03875 3735e060ae82a7fba8be6d4f55211ccc 320 PANTHER PTHR30473 2 317 2.1E-165 T 23-04-2016 CYCME_RS03875 3735e060ae82a7fba8be6d4f55211ccc 320 SUPERFAMILY SSF52540 107 273 3.39E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS03875 3735e060ae82a7fba8be6d4f55211ccc 320 Gene3D G3DSA:3.40.50.300 111 315 2.5E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS11560 301ff2bac04ea3ce72b011929c3a1c8a 643 SUPERFAMILY SSF48452 539 618 4.3E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS11560 301ff2bac04ea3ce72b011929c3a1c8a 643 SUPERFAMILY SSF48452 436 476 4.3E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS11560 301ff2bac04ea3ce72b011929c3a1c8a 643 Gene3D G3DSA:1.25.40.10 541 641 8.2E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS11560 301ff2bac04ea3ce72b011929c3a1c8a 643 Gene3D G3DSA:1.25.40.10 442 476 8.2E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CYCME_RS12450 26fba3c5555c81a6ce39641d028af61d 476 Pfam PF07044 Protein of unknown function (DUF1329) 94 472 4.0E-24 T 23-04-2016 IPR010752 Protein of unknown function DUF1329 CYCME_RS12450 26fba3c5555c81a6ce39641d028af61d 476 Gene3D G3DSA:2.50.20.10 187 473 3.9E-26 T 23-04-2016 CYCME_RS04840 c9c6b3b63b3f9b56ab538cff80eaab42 223 Pfam PF14355 Abortive infection C-terminus 99 156 5.7E-9 T 23-04-2016 IPR026001 Abortive infection protein-like, C-terminal domain CYCME_RS08460 2f4dfc09e271025a8bed596fe956b72c 212 Pfam PF10972 Peptidoglycan-binding protein, CsiV 10 126 3.1E-11 T 23-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV CYCME_RS08460 2f4dfc09e271025a8bed596fe956b72c 212 Pfam PF10972 Peptidoglycan-binding protein, CsiV 129 207 1.4E-15 T 23-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV CYCME_RS10960 960339e8c8aadad2b446449baac77bf3 68 Pfam PF11174 Protein of unknown function (DUF2970) 11 66 5.3E-20 T 23-04-2016 IPR021344 Protein of unknown function DUF2970 CYCME_RS06355 7e60d92fcde6496a383daef4ddf91191 152 Gene3D G3DSA:1.20.1260.10 27 139 1.1E-4 T 23-04-2016 IPR012347 Ferritin-related CYCME_RS02535 3f8dbc41e0aa83109e317f07bf649949 124 PANTHER PTHR10584:SF191 6 67 4.0E-15 T 23-04-2016 CYCME_RS02535 3f8dbc41e0aa83109e317f07bf649949 124 PANTHER PTHR10584 6 67 4.0E-15 T 23-04-2016 CYCME_RS02535 3f8dbc41e0aa83109e317f07bf649949 124 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.2E-30 T 23-04-2016 IPR006696 Protein of unknown function DUF423 CYCME_RS01455 58062cf5a226799e9cf2d7714632f1df 83 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 8 83 2.5E-32 T 23-04-2016 IPR019886 Sodium symporter small subunit, predicted CYCME_RS01455 58062cf5a226799e9cf2d7714632f1df 83 Pfam PF13937 Domain of unknown function (DUF4212) 6 82 4.1E-32 T 23-04-2016 IPR019886 Sodium symporter small subunit, predicted CYCME_RS04700 3ca371aad3ffc15c6960cfa41fc55768 245 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 114 223 4.5E-10 T 23-04-2016 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit CYCME_RS02865 99220fff8cfd1f4608bcb4dc376a2ed5 246 Pfam PF09836 Putative DNA-binding domain 2 88 2.6E-26 T 23-04-2016 IPR018640 Putative DNA-binding domain, bacteria CYCME_RS01810 04988486a3a1871a5dc6713ff1f7a959 263 Pfam PF04250 Protein of unknown function (DUF429) 19 236 1.6E-15 T 23-04-2016 IPR007362 Protein of unknown function DUF429 CYCME_RS06915 8751437197858735a3df17d472959c1a 1000 Pfam PF13700 Domain of unknown function (DUF4158) 9 173 2.1E-32 T 23-04-2016 IPR025296 Domain of unknown function DUF4158 CYCME_RS06915 8751437197858735a3df17d472959c1a 1000 Pfam PF01526 Tn3 transposase DDE domain 587 977 6.3E-126 T 23-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CYCME_RS10610 c2770d4942bec68d2c8d02a8a87faaf2 152 Pfam PF07233 Protein of unknown function (DUF1425) 49 136 4.7E-13 T 23-04-2016 IPR010824 Protein of unknown function DUF1425 CYCME_RS12815 9abd4f61f8190c474a28f8c408f79cbe 155 Pfam PF09990 Predicted membrane protein (DUF2231) 52 148 8.6E-6 T 23-04-2016 IPR019251 Domain of unknown function DUF2231, transmembrane CYCME_RS02730 35d580ef1715c30eb0866a9b2b084a36 222 SUPERFAMILY SSF54523 12 115 1.02E-6 T 23-04-2016 CYCME_RS02680 a6d98079b822ce0e12659c25334285eb 85 PANTHER PTHR34386 1 83 2.3E-14 T 23-04-2016 CYCME_RS02680 a6d98079b822ce0e12659c25334285eb 85 SUPERFAMILY SSF52833 5 82 4.99E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02680 a6d98079b822ce0e12659c25334285eb 85 PANTHER PTHR34386:SF2 1 83 2.3E-14 T 23-04-2016 CYCME_RS02680 a6d98079b822ce0e12659c25334285eb 85 Gene3D G3DSA:3.40.30.10 4 83 2.0E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold CYCME_RS02680 a6d98079b822ce0e12659c25334285eb 85 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 79 8.6E-15 T 23-04-2016 IPR008554 Glutaredoxin-like CYCME_RS11325 7980056715a951ca9ad6baef3ba32a3a 257 Gene3D G3DSA:3.40.50.1820 4 254 9.7E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS11325 7980056715a951ca9ad6baef3ba32a3a 257 Pfam PF00561 alpha/beta hydrolase fold 27 139 9.9E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CYCME_RS11325 7980056715a951ca9ad6baef3ba32a3a 257 PANTHER PTHR10992 3 256 3.7E-31 T 23-04-2016 CYCME_RS11325 7980056715a951ca9ad6baef3ba32a3a 257 SUPERFAMILY SSF53474 3 254 1.89E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CYCME_RS05100 8bf9a57140418e1c054f799ded3892f0 323 PANTHER PTHR35271 3 317 2.0E-12 T 23-04-2016 CYCME_RS05100 8bf9a57140418e1c054f799ded3892f0 323 Gene3D G3DSA:3.40.50.2300 142 280 1.9E-11 T 23-04-2016 CYCME_RS05100 8bf9a57140418e1c054f799ded3892f0 323 Pfam PF04392 ABC transporter substrate binding protein 144 299 5.0E-9 T 23-04-2016 IPR007487 ABC transporter, substrate-binding protein CYCME_RS05465 fdad4f8225f8fe40ecbdc20cbf05b98f 292 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 34 286 4.8E-31 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CYCME_RS05465 fdad4f8225f8fe40ecbdc20cbf05b98f 292 PANTHER PTHR30606 19 288 1.3E-38 T 23-04-2016 CYCME_RS02505 582eccd85971caf304eed8247861cf30 148 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 6 146 4.8E-43 T 23-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CYCME_RS05560 78e81101ff5f20dd3bed6f51429456fe 213 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 89 203 3.4E-12 T 23-04-2016 IPR012654 Conserved hypothetical protein CHP02391 CYCME_RS05560 78e81101ff5f20dd3bed6f51429456fe 213 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 89 201 2.6E-16 T 23-04-2016 IPR012654 Conserved hypothetical protein CHP02391 CYCME_RS10760 c8ccba73e8d51e0d5f63222dba968ddd 232 Pfam PF04972 BON domain 165 228 2.7E-7 T 23-04-2016 IPR007055 BON domain CYCME_RS00450 9e65e86c0d1b274ec501b219c62ca8bb 101 Pfam PF10052 Protein of unknown function (DUF2288) 10 96 1.1E-29 T 23-04-2016 IPR018741 Protein of unknown function DUF2288 CYCME_RS05970 052ffc0203ababd7cc081e6fba842ddb 186 Pfam PF11136 Protein of unknown function (DUF2889) 14 137 2.4E-40 T 23-04-2016 IPR021312 Protein of unknown function DUF2889 CYCME_RS04580 4946cff8e7bd0e0ac5c27b9e8ef8e853 130 Pfam PF10975 Protein of unknown function (DUF2802) 60 129 3.7E-19 T 23-04-2016 IPR021244 Protein of unknown function DUF2802 CYCME_RS04510 4d5213c989c44dee78b07cc7339ed011 179 Pfam PF03748 Flagellar basal body-associated protein FliL 81 179 6.2E-24 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CYCME_RS04510 4d5213c989c44dee78b07cc7339ed011 179 PANTHER PTHR35091 3 179 3.2E-35 T 23-04-2016 CYCME_RS09550 14c5460c24d2e8251d97314dd5ae2575 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 31 47 5.1E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS09550 14c5460c24d2e8251d97314dd5ae2575 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 5.1E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS09550 14c5460c24d2e8251d97314dd5ae2575 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 63 5.1E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS09550 14c5460c24d2e8251d97314dd5ae2575 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 117 5.1E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS09550 14c5460c24d2e8251d97314dd5ae2575 133 SMART SM00347 6 107 2.9E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CYCME_RS09550 14c5460c24d2e8251d97314dd5ae2575 133 SUPERFAMILY SSF46785 10 120 8.25E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS09550 14c5460c24d2e8251d97314dd5ae2575 133 Gene3D G3DSA:1.10.10.10 10 121 1.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CYCME_RS01930 f4ae7dc8d1ff809672a906dd18fa7356 315 PANTHER PTHR10361:SF28 43 306 1.7E-63 T 23-04-2016 CYCME_RS01930 f4ae7dc8d1ff809672a906dd18fa7356 315 PANTHER PTHR10361 43 306 1.7E-63 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS01930 f4ae7dc8d1ff809672a906dd18fa7356 315 Pfam PF01758 Sodium Bile acid symporter family 43 209 3.5E-31 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CYCME_RS06670 bd7faaf3bbe38f8179939019e1c55a32 1014 Pfam PF01526 Tn3 transposase DDE domain 596 990 2.6E-103 T 23-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CYCME_RS06670 bd7faaf3bbe38f8179939019e1c55a32 1014 Pfam PF13700 Domain of unknown function (DUF4158) 14 166 2.2E-20 T 23-04-2016 IPR025296 Domain of unknown function DUF4158 CYCME_RS12065 3d66e4a419f64fba87bb1978126021cf 167 Pfam PF07799 Protein of unknown function (DUF1643) 14 150 2.0E-24 T 23-04-2016 IPR012441 Protein of unknown function DUF1643 CYCME_RS07020 a4163c52c1986fcaba5f8c4b665870df 294 Gene3D G3DSA:3.90.550.10 5 178 6.5E-9 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07020 a4163c52c1986fcaba5f8c4b665870df 294 SUPERFAMILY SSF53448 5 253 2.81E-12 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS07020 a4163c52c1986fcaba5f8c4b665870df 294 Pfam PF00535 Glycosyl transferase family 2 19 133 2.4E-6 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CYCME_RS02480 37c9223c6ce5c0c4b5f5217a279d40c4 231 Pfam PF11859 Protein of unknown function (DUF3379) 5 218 2.2E-17 T 23-04-2016 IPR021806 Protein of unknown function DUF3379 CYCME_RS06470 9f4257f8e146366611c0e7fc31ed6aa9 144 Pfam PF04214 Protein of unknown function, DUF 41 111 1.7E-24 T 23-04-2016 IPR007332 Protein of unknown function DUF411 CYCME_RS02230 9a5ab5734af772194bd2dce30e08f3fc 230 Gene3D G3DSA:3.40.50.150 32 146 6.3E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS02230 9a5ab5734af772194bd2dce30e08f3fc 230 SUPERFAMILY SSF53335 38 220 4.46E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYCME_RS11285 78ec6ed2457ce72805e970cbb719af89 84 Pfam PF00589 Phage integrase family 4 59 3.2E-5 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS11285 78ec6ed2457ce72805e970cbb719af89 84 SUPERFAMILY SSF56349 6 70 1.82E-8 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CYCME_RS11285 78ec6ed2457ce72805e970cbb719af89 84 Gene3D G3DSA:1.10.443.10 4 62 4.2E-8 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CYCME_RS01410 6e358aaf4cc905b72d4e10aa64217e1b 112 Pfam PF09361 Phasin protein 5 98 4.1E-5 T 23-04-2016 IPR018968 Phasin CYCME_RS09795 cb2871a846c5277b051baa3a9e2f0fa4 106 Pfam PF13591 MerR HTH family regulatory protein 19 103 6.5E-26 T 23-04-2016 CYCME_RS12105 2f1492be9e0551cbb52f43f5a68b0ef6 149 Pfam PF13511 Domain of unknown function (DUF4124) 8 63 2.5E-13 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 CYCME_RS11370 634289658e0053d8a2ce4b6a6bc1bab0 69 Pfam PF06243 Phenylacetic acid degradation B 2 55 9.9E-6 T 23-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 CYCME_RS07260 442c8be246bc54caf8b2fabea140ca15 229 Pfam PF04402 Protein of unknown function (DUF541) 29 223 2.4E-20 T 23-04-2016 IPR007497 Protein of unknown function DUF541 CYCME_RS09745 9297e498f299861f045e7cb690a03106 184 Pfam PF07209 Protein of unknown function (DUF1415) 9 175 7.2E-64 T 23-04-2016 IPR009858 Protein of unknown function DUF1415 CYCME_RS03115 a7519bfb95536b7697fb49a53c9d3341 82 Pfam PF11137 Protein of unknown function (DUF2909) 5 64 4.2E-17 T 23-04-2016 IPR021313 Protein of unknown function DUF2909 CYCME_RS05635 d906faef6f542c4b71b9d00e95bb8e46 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 9 122 1.6E-7 T 23-04-2016 IPR024464 Protein of unknown function DUF2391 CYCME_RS10495 418cafbbe32f68789210b7e322e43732 503 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 2 498 8.1E-99 T 23-04-2016 IPR013381 CRISPR-associated protein Cse1 CYCME_RS10495 418cafbbe32f68789210b7e322e43732 503 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 2 462 8.5E-66 T 23-04-2016 IPR013381 CRISPR-associated protein Cse1 CYCME_RS01175 b221d61a7a49daf974dc7083905c44fa 280 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 52 273 5.9E-47 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CYCME_RS01175 b221d61a7a49daf974dc7083905c44fa 280 PANTHER PTHR10067 7 273 2.0E-59 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CYCME_RS01175 b221d61a7a49daf974dc7083905c44fa 280 Pfam PF02666 Phosphatidylserine decarboxylase 60 274 1.0E-52 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CYCME_RS09605 1fb6d78f727c651fa9dfd77c73691da4 114 Pfam PF09361 Phasin protein 8 99 3.5E-12 T 23-04-2016 IPR018968 Phasin CYCME_RS09415 43213d8ca6b4c28875c17f506fdcf17c 143 Pfam PF11086 Protein of unknown function (DUF2878) 4 133 3.2E-23 T 23-04-2016 IPR021306 Protein of unknown function DUF2878 CYCME_RS09585 a26e8b15e9b4669c1675d143ff05ab42 271 Pfam PF10977 Protein of unknown function (DUF2797) 34 267 2.6E-98 T 23-04-2016 IPR021246 Protein of unknown function DUF2797 CYCME_RS07465 0c6929f4078384b59fc037e1c6df08af 276 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 25 264 4.0E-56 T 23-04-2016 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related CYCME_RS10490 66bccd73132eb759a82ee4632f598203 153 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 27 139 8.8E-5 T 23-04-2016 IPR013382 CRISPR-associated protein Cse2 CYCME_RS10490 66bccd73132eb759a82ee4632f598203 153 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 19 141 3.0E-16 T 23-04-2016 IPR013382 CRISPR-associated protein Cse2 CYCME_RS00225 83a8b0f0af7211a91c8c1696598e1db3 150 Pfam PF14467 Domain of unknown function (DUF4426) 29 150 3.9E-39 T 23-04-2016 IPR025218 Domain of unknown function DUF4426 CYCME_RS11855 63877bafd31159bb310bbe98c5980730 106 Pfam PF09413 Putative prokaryotic signal transducing protein 1 63 1.0E-11 T 23-04-2016 IPR018551 Domain of unknown function DUF2007 CYCME_RS02205 ffce2989bfc23dcda2c65d7992909b0c 451 Pfam PF04577 Protein of unknown function (DUF563) 201 418 1.1E-33 T 23-04-2016 IPR007657 Glycosyltransferase AER61, uncharacterised GO:0016757 CYCME_RS06630 2cb2d92e3caff521bf69e7fde06df768 182 Gene3D G3DSA:2.60.40.420 61 179 8.0E-31 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS06630 2cb2d92e3caff521bf69e7fde06df768 182 SUPERFAMILY SSF49503 72 180 1.62E-23 T 23-04-2016 IPR008972 Cupredoxin CYCME_RS00840 34ec667180d68b852c44dc8c98735e2c 244 Pfam PF11306 Protein of unknown function (DUF3108) 21 237 1.3E-29 T 23-04-2016 IPR021457 Protein of unknown function DUF3108 CYCME_RS00395 05cf8a5f1fe1052a63e5db11f9920b31 643 Pfam PF00350 Dynamin family 57 264 3.5E-13 T 23-04-2016 IPR022812 Dynamin superfamily CYCME_RS00395 05cf8a5f1fe1052a63e5db11f9920b31 643 Gene3D G3DSA:3.40.50.300 195 307 3.3E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00395 05cf8a5f1fe1052a63e5db11f9920b31 643 Gene3D G3DSA:3.40.50.300 46 108 3.3E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00395 05cf8a5f1fe1052a63e5db11f9920b31 643 SUPERFAMILY SSF52540 178 321 5.51E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS00395 05cf8a5f1fe1052a63e5db11f9920b31 643 SUPERFAMILY SSF52540 50 117 5.51E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYCME_RS08650 a5f020a8cd4766701930235f97dbedbc 118 PANTHER PTHR34583 1 116 8.2E-39 T 23-04-2016 CYCME_RS08650 a5f020a8cd4766701930235f97dbedbc 118 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 12 111 1.1E-24 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CYCME_RS08650 a5f020a8cd4766701930235f97dbedbc 118 PANTHER PTHR34583:SF2 1 116 8.2E-39 T 23-04-2016 CYCME_RS01670 efeb93bb6b97181810669a6710741d00 212 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 20 152 9.7E-24 T 23-04-2016 IPR016476 SH3 domain protein CYCME_RS01670 efeb93bb6b97181810669a6710741d00 212 Pfam PF08239 Bacterial SH3 domain 30 77 9.1E-8 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type CYCME_RS09160 51ce710fe680fbf5d4e1701a00372b9f 299 Pfam PF09991 Predicted membrane protein (DUF2232) 19 289 1.2E-7 T 23-04-2016 IPR018710 Protein of unknown function DUF2232 CYCME_RS01495 5afb1cabe0eea2931120a51d49caa9e7 70 PANTHER PTHR33162 1 51 7.6E-18 T 23-04-2016 CYCME_RS01495 5afb1cabe0eea2931120a51d49caa9e7 70 Pfam PF02416 mttA/Hcf106 family 4 54 6.6E-16 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CYCME_RS01495 5afb1cabe0eea2931120a51d49caa9e7 70 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 65 23.616 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CYCME_RS01495 5afb1cabe0eea2931120a51d49caa9e7 70 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 2.5E-21 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CYCME_RS10605 81eb5f7045e60c6476a3ea135704d00b 177 Pfam PF13036 Peptidoglycan-synthase activator LpoB 10 119 2.2E-11 T 23-04-2016 IPR014094 Penicillin-binding protein activator LpoB CYCME_RS09610 1b379208c7ff2602ee20e0225a21b2b8 107 Pfam PF09361 Phasin protein 6 98 4.0E-10 T 23-04-2016 IPR018968 Phasin CYCME_RS05070 ac3feab44b43ab96ada0b19cb2ce91ca 193 Pfam PF12007 Protein of unknown function (DUF3501) 4 192 7.4E-70 T 23-04-2016 IPR021890 Protein of unknown function DUF3501 CYCME_RS09885 814b6880e1017467ebace3481b465b93 749 Pfam PF07793 Protein of unknown function (DUF1631) 54 734 1.1E-142 T 23-04-2016 IPR012434 Protein of unknown function DUF1631 CYCME_RS06930 279adc4b2e75d4df0692cbaf7799f81f 292 SUPERFAMILY SSF53448 66 201 8.16E-6 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS06930 279adc4b2e75d4df0692cbaf7799f81f 292 Gene3D G3DSA:3.90.550.10 66 195 4.9E-5 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CYCME_RS05815 307e10bce19e38e2200e40630ce85be9 393 Pfam PF05762 VWA domain containing CoxE-like protein 185 274 5.5E-8 T 23-04-2016 IPR008912 Uncharacterised protein family CoxE-like CYCME_RS07930 f591cb839e49196b3c11038b3c3471e6 534 Pfam PF06980 Protein of unknown function (DUF1302) 92 469 5.2E-11 T 23-04-2016 IPR010727 Protein of unknown function DUF1302 CYCME_RS09770 fb1fe03a0c414d94b22fdc0017ddf12d 133 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 6 45 2.0E-10 T 23-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system CYCME_RS09815 1fe18f76be9361595117cb505f3ec05c 127 Pfam PF11026 Protein of unknown function (DUF2721) 4 120 6.9E-31 T 23-04-2016 IPR021279 Protein of unknown function DUF2721 CYCME_RS02265 1b96cad43355869192a28076592e163a 344 Pfam PF01757 Acyltransferase family 8 324 9.0E-22 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 CYCME_RS02250 2d48a2ea5eb4eae4e05f3486ad0aabd5 235 Pfam PF08889 WbqC-like protein family 2 221 1.1E-53 T 23-04-2016 IPR014985 WbqC-like protein family CYCME_RS10065 e2163fc6fdf90cf4481b089abc2b8718 172 Pfam PF06295 Protein of unknown function (DUF1043) 3 89 2.4E-14 T 23-04-2016 IPR009386 Protein of unknown function DUF1043 CYCME_RS03835 e2201ffca18c0a79d23aa63cf22216bd 120 Pfam PF07238 PilZ domain 6 117 7.8E-7 T 23-04-2016 IPR009875 PilZ domain GO:0035438 CYCME_RS07385 fcab5dc3c26a7bf110ebd4e842e4e11b 122 Pfam PF16137 Domain of unknown function (DUF4845) 30 114 9.0E-26 T 23-04-2016 IPR032314 Protein of unknown function DUF4845 CYCME_RS09510 5db81f140ce4e87c8f9334aa692fe7ba 146 Pfam PF06146 Phosphate-starvation-inducible E 57 125 4.2E-14 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like CYCME_RS01775 d62a3fe45f93211280493a6c7bcc1524 219 Pfam PF13548 Domain of unknown function (DUF4126) 11 182 2.9E-56 T 23-04-2016 IPR025196 Domain of unknown function DUF4126 CYCME_RS07795 1a7c79d71dfcade271d7a2efd73cffd6 154 Pfam PF14316 Domain of unknown function (DUF4381) 6 150 1.4E-40 T 23-04-2016 IPR025489 Protein of unknown function (DUF4381 CYCME_RS04590 ac3dd9dcd9cfebfc7066cf64092e0554 438 Pfam PF02120 Flagellar hook-length control protein FliK 343 422 5.1E-16 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal CYCME_RS08660 48317e5315fb28b1c173c90d935c11cb 194 Pfam PF13244 Domain of unknown function (DUF4040) 13 74 3.1E-15 T 23-04-2016 IPR025383 Domain of unknown function DUF4040 CYCME_RS08660 48317e5315fb28b1c173c90d935c11cb 194 PANTHER PTHR33932 2 187 5.5E-49 T 23-04-2016 CYCME_RS08660 48317e5315fb28b1c173c90d935c11cb 194 PANTHER PTHR33932:SF1 2 187 5.5E-49 T 23-04-2016 CYCME_RS07845 5c24ddae5cdd3238c7c434c29c79f96b 299 Pfam PF04338 Protein of unknown function, DUF481 89 298 1.8E-22 T 23-04-2016 IPR007433 Protein of unknown function DUF481 CYCME_RS06675 57f96cc793ced207bde1d3c1703efc57 198 Pfam PF10986 Protein of unknown function (DUF2796) 30 194 3.0E-48 T 23-04-2016 IPR021253 Protein of unknown function DUF2796 CYCME_RS06700 6983fe25669f6d7a66a2c72ca57e6699 203 Pfam PF11736 Protein of unknown function (DUF3299) 46 201 3.1E-51 T 23-04-2016 IPR021727 Protein of unknown function DUF3299 CYCME_RS06850 25545668fbdb0a030b31134b72473a73 334 Pfam PF01757 Acyltransferase family 10 310 5.3E-29 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 CYCME_RS11350 8843b4f3cfd5d27c719f92b39234fdd3 220 SUPERFAMILY SSF54001 21 159 1.05E-16 T 23-04-2016 CYCME_RS11350 8843b4f3cfd5d27c719f92b39234fdd3 220 Pfam PF01841 Transglutaminase-like superfamily 26 142 2.3E-14 T 23-04-2016 IPR002931 Transglutaminase-like CYCME_RS08610 5e5a48c74d0d1a1d2d092231d9acfb1c 224 Pfam PF07298 NnrU protein 4 222 2.2E-44 T 23-04-2016 IPR009915 NnrU domain CYCME_RS03205 853d451a849600218466d62af430667c 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 245 2.1E-71 T 23-04-2016 IPR011435 Protein of unknown function DUF1538 CYCME_RS11600 b8ea2abbc96911feef92a71b563a2449 509 Pfam PF02538 Hydantoinase B/oxoprolinase 2 508 4.7E-185 T 23-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 CYCME_RS11600 b8ea2abbc96911feef92a71b563a2449 509 PANTHER PTHR11365 1 508 3.6E-191 T 23-04-2016 CYCME_RS03290 79d03658c15c9db2f262e7656fe298be 136 Pfam PF06139 BphX-like 1 132 1.2E-59 T 23-04-2016 IPR009310 BphX-like CYCME_RS02600 c7ab549250b4494c00862a750b4693a2 316 Pfam PF13511 Domain of unknown function (DUF4124) 12 50 1.3E-9 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 CYCME_RS06305 3674ac44aa17d63db42454b0f61e0e82 83 Pfam PF05275 Copper resistance protein B precursor (CopB) 20 83 4.5E-29 T 23-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 CYCME_RS06665 9c7cdf5a4b66907b7a238be8f738f348 255 Pfam PF10263 SprT-like family 14 113 1.2E-9 T 23-04-2016 IPR006640 SprT-like CYCME_RS08570 430b93f6a49319788d257e5f9dc164c0 237 Pfam PF12261 Thermostable hemolysin 36 205 2.1E-54 T 23-04-2016 IPR022050 Thermostable hemolysin