CYFUS_RS00005	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CYFUS_RS00020	SM00965	Secretin and TonB N terminus short domain
CYFUS_RS00035	SM00387	Histidine kinase-like ATPases
CYFUS_RS00035	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS00090	SM00028	Tetratricopeptide repeats
CYFUS_RS00090	SM00854	Bacterial capsule synthesis protein PGA_cap
CYFUS_RS00120	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS00170	SM01065	Starch binding domain
CYFUS_RS00200	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS00235	SM00240	Forkhead associated domain
CYFUS_RS00235	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS00240	SM00028	Tetratricopeptide repeats
CYFUS_RS00245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS00245	SM00387	Histidine kinase-like ATPases
CYFUS_RS00245	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS00260	SM00219	Tyrosine kinase, catalytic domain
CYFUS_RS00280	SM00219	Tyrosine kinase, catalytic domain
CYFUS_RS00290	SM00612	CYFUS_RS00290
CYFUS_RS00325	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS00335	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS00335	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS00335	SM00448	cheY-homologous receiver domain
CYFUS_RS00345	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS00455	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS00495	SM00448	cheY-homologous receiver domain
CYFUS_RS00535	SM00028	Tetratricopeptide repeats
CYFUS_RS00540	SM00028	Tetratricopeptide repeats
CYFUS_RS00545	SM00028	Tetratricopeptide repeats
CYFUS_RS00650	SM00448	cheY-homologous receiver domain
CYFUS_RS00675	SM00829	Enoylreductase
CYFUS_RS00685	SM00450	Rhodanese Homology Domain
CYFUS_RS00700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS00700	SM00387	Histidine kinase-like ATPases
CYFUS_RS00700	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS00730	SM00155	Phospholipase D. Active site motifs.
CYFUS_RS00745	SM00387	Histidine kinase-like ATPases
CYFUS_RS00750	SM00387	Histidine kinase-like ATPases
CYFUS_RS00750	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS00850	SM00108	Bulb-type mannose-specific lectin
CYFUS_RS00855	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS00855	SM00091	PAS domain
CYFUS_RS00855	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS00870	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS00915	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS00920	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS00925	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS00930	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS00985	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS01075	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS01110	SM00642	Alpha-amylase domain
CYFUS_RS01125	SM00060	Fibronectin type 3 domain
CYFUS_RS01135	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS01145	SM00387	Histidine kinase-like ATPases
CYFUS_RS01145	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS01150	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS01150	SM00448	cheY-homologous receiver domain
CYFUS_RS01225	SM00093	SERine  Proteinase INhibitors
CYFUS_RS01230	SM01217	CYFUS_RS01230
CYFUS_RS01255	SM00240	Forkhead associated domain
CYFUS_RS01255	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS01265	SM00331	Sigma factor PP2C-like phosphatases
CYFUS_RS01265	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CYFUS_RS01350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS01350	SM00387	Histidine kinase-like ATPases
CYFUS_RS01350	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS01360	SM00831	Cation transporter/ATPase, N-terminus
CYFUS_RS01370	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS01370	SM00448	cheY-homologous receiver domain
CYFUS_RS01385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS01385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS01490	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS01495	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS01495	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS01495	SM00091	PAS domain
CYFUS_RS01495	SM00387	Histidine kinase-like ATPases
CYFUS_RS01495	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS01495	SM00448	cheY-homologous receiver domain
CYFUS_RS01500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS01500	SM00387	Histidine kinase-like ATPases
CYFUS_RS01500	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS01510	SM00450	Rhodanese Homology Domain
CYFUS_RS01530	SM00822	CYFUS_RS01530
CYFUS_RS01560	SM01005	Alanine racemase, C-terminal domain
CYFUS_RS01570	SM00829	Enoylreductase
CYFUS_RS01610	SM00480	DNA polymerase III beta subunit
CYFUS_RS01620	SM00387	Histidine kinase-like ATPases
CYFUS_RS01685	SM00028	Tetratricopeptide repeats
CYFUS_RS01835	SM00448	cheY-homologous receiver domain
CYFUS_RS01845	SM00357	Cold shock protein domain
CYFUS_RS01865	SM00240	Forkhead associated domain
CYFUS_RS01865	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS01875	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS01905	SM00487	DEAD-like helicases superfamily
CYFUS_RS01905	SM00490	helicase superfamily c-terminal domain
CYFUS_RS01935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS01935	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS01935	SM00387	Histidine kinase-like ATPases
CYFUS_RS01935	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS01975	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS01985	SM00028	Tetratricopeptide repeats
CYFUS_RS01985	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS01985	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS02005	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS02010	SM00448	cheY-homologous receiver domain
CYFUS_RS02085	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CYFUS_RS02090	SM00387	Histidine kinase-like ATPases
CYFUS_RS02090	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02095	SM00612	CYFUS_RS02095
CYFUS_RS02115	SM00448	cheY-homologous receiver domain
CYFUS_RS02120	SM00260	Two component signalling adaptor domain
CYFUS_RS02125	SM00260	Two component signalling adaptor domain
CYFUS_RS02130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS02135	SM00260	Two component signalling adaptor domain
CYFUS_RS02135	SM00387	Histidine kinase-like ATPases
CYFUS_RS02135	SM00448	cheY-homologous receiver domain
CYFUS_RS02135	SM01231	CYFUS_RS02135
CYFUS_RS02140	SM00448	cheY-homologous receiver domain
CYFUS_RS02165	SM00448	cheY-homologous receiver domain
CYFUS_RS02190	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CYFUS_RS02225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS02225	SM00387	Histidine kinase-like ATPases
CYFUS_RS02225	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02270	SM00091	PAS domain
CYFUS_RS02270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS02270	SM00387	Histidine kinase-like ATPases
CYFUS_RS02270	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02280	SM01400	CYFUS_RS02280
CYFUS_RS02285	SM00479	CYFUS_RS02285
CYFUS_RS02290	SM00448	cheY-homologous receiver domain
CYFUS_RS02355	SM00422	helix_turn_helix, mercury resistance
CYFUS_RS02375	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS02375	SM00091	PAS domain
CYFUS_RS02375	SM00387	Histidine kinase-like ATPases
CYFUS_RS02375	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02380	SM00028	Tetratricopeptide repeats
CYFUS_RS02390	SM00091	PAS domain
CYFUS_RS02390	SM00387	Histidine kinase-like ATPases
CYFUS_RS02390	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02390	SM00448	cheY-homologous receiver domain
CYFUS_RS02395	SM00387	Histidine kinase-like ATPases
CYFUS_RS02395	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02395	SM00448	cheY-homologous receiver domain
CYFUS_RS02405	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
CYFUS_RS02410	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS02430	SM00020	Trypsin-like serine protease
CYFUS_RS02515	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS02520	SM00822	CYFUS_RS02520
CYFUS_RS02570	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS02620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS02620	SM00387	Histidine kinase-like ATPases
CYFUS_RS02620	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02770	SM00091	PAS domain
CYFUS_RS02770	SM00387	Histidine kinase-like ATPases
CYFUS_RS02770	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02800	SM00448	cheY-homologous receiver domain
CYFUS_RS02810	SM00073	Histidine Phosphotransfer domain
CYFUS_RS02810	SM00260	Two component signalling adaptor domain
CYFUS_RS02810	SM00387	Histidine kinase-like ATPases
CYFUS_RS02810	SM01231	CYFUS_RS02810
CYFUS_RS02815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS02820	SM00448	cheY-homologous receiver domain
CYFUS_RS02830	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS02830	SM00387	Histidine kinase-like ATPases
CYFUS_RS02830	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02830	SM00448	cheY-homologous receiver domain
CYFUS_RS02835	SM00448	cheY-homologous receiver domain
CYFUS_RS02840	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS02840	SM00091	PAS domain
CYFUS_RS02840	SM00387	Histidine kinase-like ATPases
CYFUS_RS02840	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS02865	SM00822	CYFUS_RS02865
CYFUS_RS02940	SM00354	helix_turn _helix lactose operon repressor
CYFUS_RS02950	SM01007	Class II Aldolase and Adducin N-terminal domain
CYFUS_RS03020	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS03070	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS03105	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS03105	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS03105	SM00091	PAS domain
CYFUS_RS03105	SM00387	Histidine kinase-like ATPases
CYFUS_RS03105	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03130	SM00644	CYFUS_RS03130
CYFUS_RS03160	SM00240	Forkhead associated domain
CYFUS_RS03160	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS03230	SM00387	Histidine kinase-like ATPases
CYFUS_RS03230	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03240	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS03290	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS03395	SM00387	Histidine kinase-like ATPases
CYFUS_RS03400	SM00331	Sigma factor PP2C-like phosphatases
CYFUS_RS03405	SM00387	Histidine kinase-like ATPases
CYFUS_RS03405	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03405	SM00448	cheY-homologous receiver domain
CYFUS_RS03410	SM00091	PAS domain
CYFUS_RS03410	SM00387	Histidine kinase-like ATPases
CYFUS_RS03410	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03410	SM00448	cheY-homologous receiver domain
CYFUS_RS03430	SM00331	Sigma factor PP2C-like phosphatases
CYFUS_RS03430	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CYFUS_RS03485	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS03540	SM00567	E-Z type HEAT repeats
CYFUS_RS03560	SM00235	Zinc-dependent metalloprotease
CYFUS_RS03565	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS03565	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS03565	SM00387	Histidine kinase-like ATPases
CYFUS_RS03600	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS03610	SM00248	ankyrin repeats
CYFUS_RS03625	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS03625	SM00387	Histidine kinase-like ATPases
CYFUS_RS03625	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03695	SM00387	Histidine kinase-like ATPases
CYFUS_RS03695	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03695	SM00448	cheY-homologous receiver domain
CYFUS_RS03700	SM00448	cheY-homologous receiver domain
CYFUS_RS03705	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS03705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS03705	SM00091	PAS domain
CYFUS_RS03705	SM00387	Histidine kinase-like ATPases
CYFUS_RS03705	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03705	SM00448	cheY-homologous receiver domain
CYFUS_RS03830	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS03830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS03830	SM00387	Histidine kinase-like ATPases
CYFUS_RS03830	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03830	SM00448	cheY-homologous receiver domain
CYFUS_RS03835	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS03835	SM00091	PAS domain
CYFUS_RS03835	SM00387	Histidine kinase-like ATPases
CYFUS_RS03835	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS03835	SM00448	cheY-homologous receiver domain
CYFUS_RS03860	SM00448	cheY-homologous receiver domain
CYFUS_RS03880	SM00854	Bacterial capsule synthesis protein PGA_cap
CYFUS_RS03890	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS03905	SM00062	Bacterial periplasmic substrate-binding proteins
CYFUS_RS03915	SM00060	Fibronectin type 3 domain
CYFUS_RS03915	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS03960	SM00387	Histidine kinase-like ATPases
CYFUS_RS03960	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS04010	SM00631	CYFUS_RS04010
CYFUS_RS04040	SM00448	cheY-homologous receiver domain
CYFUS_RS04045	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS04075	SM00387	Histidine kinase-like ATPases
CYFUS_RS04075	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS04080	SM00448	cheY-homologous receiver domain
CYFUS_RS04080	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS04105	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
CYFUS_RS04120	SM00341	Helicase and RNase D C-terminal
CYFUS_RS04120	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CYFUS_RS04120	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CYFUS_RS04120	SM00487	DEAD-like helicases superfamily
CYFUS_RS04120	SM00490	helicase superfamily c-terminal domain
CYFUS_RS04120	SM00493	CYFUS_RS04120
CYFUS_RS04130	SM00235	Zinc-dependent metalloprotease
CYFUS_RS04135	SM00257	Lysin motif
CYFUS_RS04140	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS04145	SM00642	Alpha-amylase domain
CYFUS_RS04150	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS04155	SM00387	Histidine kinase-like ATPases
CYFUS_RS04155	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS04155	SM00448	cheY-homologous receiver domain
CYFUS_RS04170	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS04175	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS04200	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS04205	SM01260	CYFUS_RS04205
CYFUS_RS04250	SM00318	Staphylococcal nuclease homologues
CYFUS_RS04270	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS04335	SM00014	Acid phosphatase homologues
CYFUS_RS04345	SM00091	PAS domain
CYFUS_RS04345	SM00387	Histidine kinase-like ATPases
CYFUS_RS04355	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS04370	SM00873	B3/4 domain
CYFUS_RS04385	SM00387	Histidine kinase-like ATPases
CYFUS_RS04385	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS04390	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS04395	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS04410	SM00567	E-Z type HEAT repeats
CYFUS_RS04485	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS04495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS04495	SM00387	Histidine kinase-like ATPases
CYFUS_RS04495	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS04510	SM00091	PAS domain
CYFUS_RS04510	SM00387	Histidine kinase-like ATPases
CYFUS_RS04510	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS04520	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS04610	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS04635	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS04670	SM00357	Cold shock protein domain
CYFUS_RS04705	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS04715	SM00448	cheY-homologous receiver domain
CYFUS_RS04720	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS04720	SM00448	cheY-homologous receiver domain
CYFUS_RS04735	SM00448	cheY-homologous receiver domain
CYFUS_RS04740	SM00387	Histidine kinase-like ATPases
CYFUS_RS04740	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS04740	SM00448	cheY-homologous receiver domain
CYFUS_RS04745	SM00897	FIST N domain
CYFUS_RS04745	SM01204	CYFUS_RS04745
CYFUS_RS04760	SM00487	DEAD-like helicases superfamily
CYFUS_RS04760	SM00490	helicase superfamily c-terminal domain
CYFUS_RS04795	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS04805	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS04825	SM00320	WD40 repeats
CYFUS_RS04840	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS04865	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS04875	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS04880	SM00773	Proposed nucleic acid binding domain
CYFUS_RS04895	SM00986	Uracil DNA glycosylase superfamily
CYFUS_RS04895	SM00987	UreE urease accessory protein, C-terminal domain 
CYFUS_RS04900	SM00028	Tetratricopeptide repeats
CYFUS_RS04910	SM00434	DNA Topoisomerase IV
CYFUS_RS04920	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS04920	SM00609	Vault protein Inter-alpha-Trypsin domain
CYFUS_RS04925	SM00422	helix_turn_helix, mercury resistance
CYFUS_RS04965	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS04985	SM00966	SpoVT / AbrB like domain 
CYFUS_RS05025	SM00710	Parallel beta-helix repeats
CYFUS_RS05100	SM00612	CYFUS_RS05100
CYFUS_RS05165	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS05165	SM00240	Forkhead associated domain
CYFUS_RS05175	SM00857	Resolvase, N terminal domain
CYFUS_RS05200	SM00886	Stress responsive A/B Barrel Domain
CYFUS_RS05225	SM00387	Histidine kinase-like ATPases
CYFUS_RS05255	SM00822	CYFUS_RS05255
CYFUS_RS05275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CYFUS_RS05275	SM00866	CYFUS_RS05275
CYFUS_RS05295	SM01081	Putative carbohydrate binding domain
CYFUS_RS05300	SM00495	Chitin-binding domain type 3
CYFUS_RS05300	SM00636	CYFUS_RS05300
CYFUS_RS05310	SM00636	CYFUS_RS05310
CYFUS_RS05310	SM00637	CYFUS_RS05310
CYFUS_RS05315	SM00060	Fibronectin type 3 domain
CYFUS_RS05315	SM00495	Chitin-binding domain type 3
CYFUS_RS05315	SM00636	CYFUS_RS05315
CYFUS_RS05320	SM00060	Fibronectin type 3 domain
CYFUS_RS05390	SM00836	DALR anticodon binding domain
CYFUS_RS05390	SM01016	Arginyl tRNA synthetase N terminal dom
CYFUS_RS05420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS05420	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS05420	SM00091	PAS domain
CYFUS_RS05420	SM00387	Histidine kinase-like ATPases
CYFUS_RS05420	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS05425	SM00448	cheY-homologous receiver domain
CYFUS_RS05430	SM00387	Histidine kinase-like ATPases
CYFUS_RS05430	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS05430	SM00448	cheY-homologous receiver domain
CYFUS_RS05445	SM00901	CYFUS_RS05445
CYFUS_RS05510	SM00830	Chorismate mutase type II
CYFUS_RS05515	SM00205	Thaumatin family
CYFUS_RS05540	SM00612	CYFUS_RS05540
CYFUS_RS05565	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS05570	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS05615	SM00344	helix_turn_helix ASNC type
CYFUS_RS05645	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS05665	SM00880	CYFUS_RS05665
CYFUS_RS05710	SM00857	Resolvase, N terminal domain
CYFUS_RS05775	SM00448	cheY-homologous receiver domain
CYFUS_RS05775	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS05780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS05780	SM00387	Histidine kinase-like ATPases
CYFUS_RS05780	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS05790	SM00244	prohibitin homologues
CYFUS_RS05845	SM00320	WD40 repeats
CYFUS_RS05845	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS05865	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS05880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS05880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS05905	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS05910	SM00028	Tetratricopeptide repeats
CYFUS_RS05975	SM00563	Phosphate acyltransferases
CYFUS_RS05980	SM00422	helix_turn_helix, mercury resistance
CYFUS_RS06040	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS06045	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS06045	SM00091	PAS domain
CYFUS_RS06045	SM00240	Forkhead associated domain
CYFUS_RS06045	SM00387	Histidine kinase-like ATPases
CYFUS_RS06045	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS06045	SM00448	cheY-homologous receiver domain
CYFUS_RS06060	SM00028	Tetratricopeptide repeats
CYFUS_RS06060	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS06075	SM00829	Enoylreductase
CYFUS_RS06100	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS06145	SM00422	helix_turn_helix, mercury resistance
CYFUS_RS06160	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CYFUS_RS06160	SM00758	CYFUS_RS06160
CYFUS_RS06170	SM00448	cheY-homologous receiver domain
CYFUS_RS06170	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS06175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS06175	SM00387	Histidine kinase-like ATPases
CYFUS_RS06175	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS06225	SM00060	Fibronectin type 3 domain
CYFUS_RS06240	SM01260	CYFUS_RS06240
CYFUS_RS06255	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS06295	SM01350	CYFUS_RS06295
CYFUS_RS06310	SM01350	CYFUS_RS06310
CYFUS_RS06385	SM00563	Phosphate acyltransferases
CYFUS_RS06410	SM00387	Histidine kinase-like ATPases
CYFUS_RS06410	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS06415	SM00028	Tetratricopeptide repeats
CYFUS_RS06415	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS06420	SM00631	CYFUS_RS06420
CYFUS_RS06435	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS06450	SM00091	PAS domain
CYFUS_RS06450	SM00387	Histidine kinase-like ATPases
CYFUS_RS06450	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS06450	SM00448	cheY-homologous receiver domain
CYFUS_RS06455	SM00448	cheY-homologous receiver domain
CYFUS_RS06460	SM00387	Histidine kinase-like ATPases
CYFUS_RS06460	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS06490	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS06505	SM00855	Phosphoglycerate mutase family
CYFUS_RS06530	SM00487	DEAD-like helicases superfamily
CYFUS_RS06530	SM00490	helicase superfamily c-terminal domain
CYFUS_RS06540	SM00822	CYFUS_RS06540
CYFUS_RS06640	SM00060	Fibronectin type 3 domain
CYFUS_RS06685	SM01321	CYFUS_RS06685
CYFUS_RS06690	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CYFUS_RS06700	SM00257	Lysin motif
CYFUS_RS06730	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS06735	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS06750	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS06750	SM00387	Histidine kinase-like ATPases
CYFUS_RS06750	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS06755	SM00448	cheY-homologous receiver domain
CYFUS_RS06760	SM00387	Histidine kinase-like ATPases
CYFUS_RS06760	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS06760	SM00448	cheY-homologous receiver domain
CYFUS_RS06790	SM00191	Integrin alpha (beta-propellor repeats).
CYFUS_RS06795	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS06810	SM00267	diguanylate cyclase
CYFUS_RS06810	SM00448	cheY-homologous receiver domain
CYFUS_RS06855	SM00387	Histidine kinase-like ATPases
CYFUS_RS06855	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS06860	SM00448	cheY-homologous receiver domain
CYFUS_RS06860	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS06880	SM00248	ankyrin repeats
CYFUS_RS06880	SM00860	SMI1 / KNR4 family
CYFUS_RS06945	SM00487	DEAD-like helicases superfamily
CYFUS_RS06945	SM00490	helicase superfamily c-terminal domain
CYFUS_RS06945	SM00982	CYFUS_RS06945
CYFUS_RS06945	SM01058	CarD-like/TRCF domain
CYFUS_RS06965	SM00938	Nitrogen regulatory protein P-II
CYFUS_RS06985	SM00984	UDP binding domain
CYFUS_RS07015	SM00028	Tetratricopeptide repeats
CYFUS_RS07035	SM00867	YceI-like domain 
CYFUS_RS07085	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS07115	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS07115	SM00091	PAS domain
CYFUS_RS07115	SM00387	Histidine kinase-like ATPases
CYFUS_RS07115	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS07200	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS07200	SM00091	PAS domain
CYFUS_RS07200	SM00387	Histidine kinase-like ATPases
CYFUS_RS07200	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS07205	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS07205	SM00448	cheY-homologous receiver domain
CYFUS_RS07235	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CYFUS_RS07245	SM00448	cheY-homologous receiver domain
CYFUS_RS07280	SM00448	cheY-homologous receiver domain
CYFUS_RS07305	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS07325	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS07325	SM00091	PAS domain
CYFUS_RS07325	SM00387	Histidine kinase-like ATPases
CYFUS_RS07325	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS07330	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS07330	SM00448	cheY-homologous receiver domain
CYFUS_RS07335	SM00387	Histidine kinase-like ATPases
CYFUS_RS07350	SM01103	CYFUS_RS07350
CYFUS_RS07355	SM00028	Tetratricopeptide repeats
CYFUS_RS07355	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS07380	SM00878	Biotin carboxylase C-terminal domain
CYFUS_RS07490	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS07490	SM00448	cheY-homologous receiver domain
CYFUS_RS07500	SM00387	Histidine kinase-like ATPases
CYFUS_RS07500	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS07575	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS07595	SM00028	Tetratricopeptide repeats
CYFUS_RS07605	SM00357	Cold shock protein domain
CYFUS_RS07685	SM00860	SMI1 / KNR4 family
CYFUS_RS07700	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS07735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CYFUS_RS07750	SM00028	Tetratricopeptide repeats
CYFUS_RS07755	SM00612	CYFUS_RS07755
CYFUS_RS07825	SM00822	CYFUS_RS07825
CYFUS_RS07835	SM00823	Phosphopantetheine attachment site
CYFUS_RS07835	SM00824	Thioesterase
CYFUS_RS07855	SM00235	Zinc-dependent metalloprotease
CYFUS_RS07925	SM00448	cheY-homologous receiver domain
CYFUS_RS07930	SM00387	Histidine kinase-like ATPases
CYFUS_RS07955	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS08015	SM00860	SMI1 / KNR4 family
CYFUS_RS08065	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS08095	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS08105	SM01360	CYFUS_RS08105
CYFUS_RS08135	SM00387	Histidine kinase-like ATPases
CYFUS_RS08135	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS08140	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS08140	SM00448	cheY-homologous receiver domain
CYFUS_RS08170	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS08185	SM00881	CoA binding domain
CYFUS_RS08245	SM00387	Histidine kinase-like ATPases
CYFUS_RS08255	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS08255	SM00320	WD40 repeats
CYFUS_RS08335	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS08365	SM00028	Tetratricopeptide repeats
CYFUS_RS08370	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS08370	SM00091	PAS domain
CYFUS_RS08370	SM00387	Histidine kinase-like ATPases
CYFUS_RS08370	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS08370	SM00448	cheY-homologous receiver domain
CYFUS_RS08375	SM00448	cheY-homologous receiver domain
CYFUS_RS08420	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS08425	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS08440	SM01321	CYFUS_RS08440
CYFUS_RS08460	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS08490	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS08530	SM00060	Fibronectin type 3 domain
CYFUS_RS08530	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS08540	SM01321	CYFUS_RS08540
CYFUS_RS08620	SM00857	Resolvase, N terminal domain
CYFUS_RS08695	SM00857	Resolvase, N terminal domain
CYFUS_RS08805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS08805	SM00387	Histidine kinase-like ATPases
CYFUS_RS08805	SM00448	cheY-homologous receiver domain
CYFUS_RS08820	SM00028	Tetratricopeptide repeats
CYFUS_RS08825	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS08850	SM00028	Tetratricopeptide repeats
CYFUS_RS08995	SM00028	Tetratricopeptide repeats
CYFUS_RS09025	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS09025	SM00448	cheY-homologous receiver domain
CYFUS_RS09035	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS09035	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS09035	SM00091	PAS domain
CYFUS_RS09035	SM00387	Histidine kinase-like ATPases
CYFUS_RS09035	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS09035	SM00448	cheY-homologous receiver domain
CYFUS_RS09040	SM00448	cheY-homologous receiver domain
CYFUS_RS09045	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS09045	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS09045	SM00091	PAS domain
CYFUS_RS09045	SM00387	Histidine kinase-like ATPases
CYFUS_RS09045	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS09050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS09050	SM00387	Histidine kinase-like ATPases
CYFUS_RS09050	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS09115	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS09125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS09125	SM00876	Biotin and Thiamin Synthesis associated domain
CYFUS_RS09165	SM00822	CYFUS_RS09165
CYFUS_RS09170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS09180	SM00822	CYFUS_RS09180
CYFUS_RS09180	SM00825	Beta-ketoacyl synthase
CYFUS_RS09190	SM00825	Beta-ketoacyl synthase
CYFUS_RS09190	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS09230	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS09235	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CYFUS_RS09250	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CYFUS_RS09260	SM00855	Phosphoglycerate mutase family
CYFUS_RS09300	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS09305	SM00260	Two component signalling adaptor domain
CYFUS_RS09310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS09310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS09315	SM00073	Histidine Phosphotransfer domain
CYFUS_RS09315	SM00260	Two component signalling adaptor domain
CYFUS_RS09315	SM00387	Histidine kinase-like ATPases
CYFUS_RS09315	SM01231	CYFUS_RS09315
CYFUS_RS09320	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS09320	SM00448	cheY-homologous receiver domain
CYFUS_RS09340	SM00267	diguanylate cyclase
CYFUS_RS09340	SM00448	cheY-homologous receiver domain
CYFUS_RS09350	SM00448	cheY-homologous receiver domain
CYFUS_RS09350	SM00850	LytTr DNA-binding domain
CYFUS_RS09365	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS09365	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS09365	SM00387	Histidine kinase-like ATPases
CYFUS_RS09370	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS09370	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS09370	SM00387	Histidine kinase-like ATPases
CYFUS_RS09375	SM00320	WD40 repeats
CYFUS_RS09385	SM00257	Lysin motif
CYFUS_RS09395	SM00487	DEAD-like helicases superfamily
CYFUS_RS09395	SM00490	helicase superfamily c-terminal domain
CYFUS_RS09445	SM00460	Transglutaminase/protease-like homologues
CYFUS_RS09500	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS09515	SM00028	Tetratricopeptide repeats
CYFUS_RS09515	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS09520	SM00020	Trypsin-like serine protease
CYFUS_RS09540	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS09580	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS09580	SM01091	Transporter associated domain
CYFUS_RS09605	SM00420	helix_turn_helix, Deoxyribose operon repressor
CYFUS_RS09605	SM01134	CYFUS_RS09605
CYFUS_RS09610	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS09620	SM00822	CYFUS_RS09620
CYFUS_RS09660	SM00642	Alpha-amylase domain
CYFUS_RS09665	SM00387	Histidine kinase-like ATPases
CYFUS_RS09665	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS09670	SM00387	Histidine kinase-like ATPases
CYFUS_RS09680	SM00769	Water Stress and Hypersensitive response
CYFUS_RS09695	SM00642	Alpha-amylase domain
CYFUS_RS09695	SM00810	Alpha-amylase C-terminal beta-sheet domain
CYFUS_RS09740	SM00612	CYFUS_RS09740
CYFUS_RS09755	SM00448	cheY-homologous receiver domain
CYFUS_RS09755	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS09770	SM00387	Histidine kinase-like ATPases
CYFUS_RS09770	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS09775	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS09820	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CYFUS_RS09840	SM00240	Forkhead associated domain
CYFUS_RS09845	SM00155	Phospholipase D. Active site motifs.
CYFUS_RS09855	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS09870	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS09945	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS09970	SM00248	ankyrin repeats
CYFUS_RS09985	SM00028	Tetratricopeptide repeats
CYFUS_RS10015	SM00387	Histidine kinase-like ATPases
CYFUS_RS10030	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS10070	SM00244	prohibitin homologues
CYFUS_RS10080	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS10085	SM00776	CYFUS_RS10085
CYFUS_RS10085	SM01029	Beta-galactosidase, domain 2
CYFUS_RS10110	SM00775	CYFUS_RS10110
CYFUS_RS10135	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS10140	SM00091	PAS domain
CYFUS_RS10140	SM00387	Histidine kinase-like ATPases
CYFUS_RS10140	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS10140	SM00448	cheY-homologous receiver domain
CYFUS_RS10150	SM00028	Tetratricopeptide repeats
CYFUS_RS10170	SM00091	PAS domain
CYFUS_RS10170	SM00387	Histidine kinase-like ATPases
CYFUS_RS10180	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS10200	SM00448	cheY-homologous receiver domain
CYFUS_RS10260	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS10280	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CYFUS_RS10320	SM00631	CYFUS_RS10320
CYFUS_RS10340	SM00028	Tetratricopeptide repeats
CYFUS_RS10355	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYFUS_RS10355	SM00316	Ribosomal protein S1-like RNA-binding domain
CYFUS_RS10355	SM00732	Likely ribonuclease with RNase H fold.
CYFUS_RS10460	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS10470	SM00822	CYFUS_RS10470
CYFUS_RS10565	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS10585	SM00363	S4 RNA-binding domain
CYFUS_RS10600	SM00091	PAS domain
CYFUS_RS10600	SM00387	Histidine kinase-like ATPases
CYFUS_RS10600	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS10600	SM00448	cheY-homologous receiver domain
CYFUS_RS10640	SM00487	DEAD-like helicases superfamily
CYFUS_RS10640	SM00490	helicase superfamily c-terminal domain
CYFUS_RS10655	SM00478	endonuclease III
CYFUS_RS10670	SM00411	bacterial (prokaryotic) histone like domain
CYFUS_RS10695	SM00852	Probable molybdopterin binding domain
CYFUS_RS10710	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS10715	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS10760	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS10785	SM01207	CYFUS_RS10785
CYFUS_RS10790	SM00981	CYFUS_RS10790
CYFUS_RS10800	SM00346	helix_turn_helix isocitrate lyase regulation
CYFUS_RS10805	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS10805	SM00843	CYFUS_RS10805
CYFUS_RS10825	SM00845	GatB domain
CYFUS_RS10890	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS10905	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS10920	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
CYFUS_RS11030	SM01260	CYFUS_RS11030
CYFUS_RS11070	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS11070	SM00937	CYFUS_RS11070
CYFUS_RS11070	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS11135	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS11135	SM00387	Histidine kinase-like ATPases
CYFUS_RS11135	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS11140	SM00448	cheY-homologous receiver domain
CYFUS_RS11145	SM00387	Histidine kinase-like ATPases
CYFUS_RS11145	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS11145	SM00448	cheY-homologous receiver domain
CYFUS_RS11195	SM00822	CYFUS_RS11195
CYFUS_RS11210	SM00240	Forkhead associated domain
CYFUS_RS11210	SM00267	diguanylate cyclase
CYFUS_RS11220	SM00563	Phosphate acyltransferases
CYFUS_RS11240	SM00151	SWI complex, BAF60b domains
CYFUS_RS11245	SM00642	Alpha-amylase domain
CYFUS_RS11250	SM00642	Alpha-amylase domain
CYFUS_RS11310	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CYFUS_RS11320	SM00458	Ricin-type beta-trefoil
CYFUS_RS11415	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS11415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS11415	SM00091	PAS domain
CYFUS_RS11415	SM00387	Histidine kinase-like ATPases
CYFUS_RS11415	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS11440	SM00506	Appr-1"-p processing enzyme
CYFUS_RS11455	SM00822	CYFUS_RS11455
CYFUS_RS11480	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS11495	SM00563	Phosphate acyltransferases
CYFUS_RS11500	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS11515	SM00448	cheY-homologous receiver domain
CYFUS_RS11520	SM00387	Histidine kinase-like ATPases
CYFUS_RS11520	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS11530	SM00478	endonuclease III
CYFUS_RS11550	SM00179	Calcium-binding EGF-like domain
CYFUS_RS11550	SM00181	Epidermal growth factor-like domain.
CYFUS_RS11565	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS11565	SM00091	PAS domain
CYFUS_RS11565	SM00387	Histidine kinase-like ATPases
CYFUS_RS11565	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS11575	SM00320	WD40 repeats
CYFUS_RS11605	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS11605	SM00387	Histidine kinase-like ATPases
CYFUS_RS11605	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS11615	SM00822	CYFUS_RS11615
CYFUS_RS11620	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS11670	SM00487	DEAD-like helicases superfamily
CYFUS_RS11670	SM00490	helicase superfamily c-terminal domain
CYFUS_RS11685	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS11745	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS11745	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS11755	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS11765	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS11765	SM00091	PAS domain
CYFUS_RS11765	SM00387	Histidine kinase-like ATPases
CYFUS_RS11765	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS11785	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS11785	SM00393	Putative single-stranded nucleic acids-binding domain
CYFUS_RS11800	SM00458	Ricin-type beta-trefoil
CYFUS_RS11895	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CYFUS_RS11900	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS11920	SM00363	S4 RNA-binding domain
CYFUS_RS11980	SM00108	Bulb-type mannose-specific lectin
CYFUS_RS12030	SM00091	PAS domain
CYFUS_RS12030	SM00387	Histidine kinase-like ATPases
CYFUS_RS12035	SM01217	CYFUS_RS12035
CYFUS_RS12085	SM00860	SMI1 / KNR4 family
CYFUS_RS12090	SM00822	CYFUS_RS12090
CYFUS_RS12095	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS12110	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS12115	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS12140	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS12165	SM00448	cheY-homologous receiver domain
CYFUS_RS12165	SM00850	LytTr DNA-binding domain
CYFUS_RS12180	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYFUS_RS12200	SM00860	SMI1 / KNR4 family
CYFUS_RS12270	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS12280	SM00960	Roadblock/LC7 domain
CYFUS_RS12290	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYFUS_RS12290	SM00493	CYFUS_RS12290
CYFUS_RS12305	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS12355	SM00028	Tetratricopeptide repeats
CYFUS_RS12375	SM00028	Tetratricopeptide repeats
CYFUS_RS12385	SM00563	Phosphate acyltransferases
CYFUS_RS12410	SM00495	Chitin-binding domain type 3
CYFUS_RS12445	SM00490	helicase superfamily c-terminal domain
CYFUS_RS12470	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS12500	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS12505	SM00341	Helicase and RNase D C-terminal
CYFUS_RS12505	SM00487	DEAD-like helicases superfamily
CYFUS_RS12505	SM00490	helicase superfamily c-terminal domain
CYFUS_RS12530	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS12530	SM00419	helix_turn_helix, cAMP Regulatory protein
CYFUS_RS12535	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS12535	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS12535	SM00240	Forkhead associated domain
CYFUS_RS12540	SM00387	Histidine kinase-like ATPases
CYFUS_RS12540	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS12540	SM00448	cheY-homologous receiver domain
CYFUS_RS12600	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS12730	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS12755	SM00108	Bulb-type mannose-specific lectin
CYFUS_RS12775	SM00710	Parallel beta-helix repeats
CYFUS_RS12780	SM00028	Tetratricopeptide repeats
CYFUS_RS12795	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS12805	SM00050	Homologues of snake disintegrins  
CYFUS_RS12805	SM00612	CYFUS_RS12805
CYFUS_RS12815	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS12815	SM00448	cheY-homologous receiver domain
CYFUS_RS12855	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS12870	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS12880	SM00773	Proposed nucleic acid binding domain
CYFUS_RS12895	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS12915	SM00091	PAS domain
CYFUS_RS12915	SM00387	Histidine kinase-like ATPases
CYFUS_RS12935	SM00240	Forkhead associated domain
CYFUS_RS12960	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS12960	SM00387	Histidine kinase-like ATPases
CYFUS_RS12960	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS12990	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS13010	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS13105	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS13150	SM00822	CYFUS_RS13150
CYFUS_RS13155	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS13155	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS13155	SM00387	Histidine kinase-like ATPases
CYFUS_RS13175	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS13190	SM00984	UDP binding domain
CYFUS_RS13210	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS13215	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS13235	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS13275	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS13280	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS13285	SM00487	DEAD-like helicases superfamily
CYFUS_RS13285	SM00490	helicase superfamily c-terminal domain
CYFUS_RS13290	SM00838	Elongation factor G C-terminus
CYFUS_RS13290	SM00889	Elongation factor G, domain IV
CYFUS_RS13295	SM00363	S4 RNA-binding domain
CYFUS_RS13315	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS13320	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS13355	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS13365	SM01359	CYFUS_RS13365
CYFUS_RS13365	SM01360	CYFUS_RS13365
CYFUS_RS13480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS13480	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS13480	SM00387	Histidine kinase-like ATPases
CYFUS_RS13505	SM00829	Enoylreductase
CYFUS_RS13550	SM00823	Phosphopantetheine attachment site
CYFUS_RS13555	SM00823	Phosphopantetheine attachment site
CYFUS_RS13580	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS13580	SM00091	PAS domain
CYFUS_RS13580	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS13580	SM00387	Histidine kinase-like ATPases
CYFUS_RS13580	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS13595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS13595	SM00387	Histidine kinase-like ATPases
CYFUS_RS13650	SM00052	Putative diguanylate phosphodiesterase
CYFUS_RS13675	SM00028	Tetratricopeptide repeats
CYFUS_RS13710	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS13790	SM00028	Tetratricopeptide repeats
CYFUS_RS13800	SM00028	Tetratricopeptide repeats
CYFUS_RS13810	SM00240	Forkhead associated domain
CYFUS_RS13815	SM00028	Tetratricopeptide repeats
CYFUS_RS13835	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS13835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS13840	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS13845	SM00257	Lysin motif
CYFUS_RS13880	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS13900	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS13950	SM00247	Beta/gamma crystallins
CYFUS_RS13955	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
CYFUS_RS13955	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS13975	SM01321	CYFUS_RS13975
CYFUS_RS14025	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS14035	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS14055	SM00387	Histidine kinase-like ATPases
CYFUS_RS14055	SM00433	TopoisomeraseII
CYFUS_RS14060	SM00434	DNA Topoisomerase IV
CYFUS_RS14070	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS14090	SM00240	Forkhead associated domain
CYFUS_RS14090	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS14100	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS14160	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS14175	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS14175	SM00448	cheY-homologous receiver domain
CYFUS_RS14180	SM00470	ParB-like nuclease domain
CYFUS_RS14185	SM00240	Forkhead associated domain
CYFUS_RS14190	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS14250	SM01001	AIR carboxylase
CYFUS_RS14255	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS14315	SM00363	S4 RNA-binding domain
CYFUS_RS14320	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS14350	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS14360	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CYFUS_RS14375	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS14395	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYFUS_RS14410	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CYFUS_RS14440	SM00387	Histidine kinase-like ATPases
CYFUS_RS14440	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS14440	SM00448	cheY-homologous receiver domain
CYFUS_RS14445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS14480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS14480	SM00387	Histidine kinase-like ATPases
CYFUS_RS14480	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS14515	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS14540	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS14560	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS14610	SM00450	Rhodanese Homology Domain
CYFUS_RS14615	SM00450	Rhodanese Homology Domain
CYFUS_RS14625	SM00060	Fibronectin type 3 domain
CYFUS_RS14625	SM00495	Chitin-binding domain type 3
CYFUS_RS14625	SM00636	CYFUS_RS14625
CYFUS_RS14635	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS14645	SM00028	Tetratricopeptide repeats
CYFUS_RS14695	SM00387	Histidine kinase-like ATPases
CYFUS_RS14695	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS14705	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS14755	SM00028	Tetratricopeptide repeats
CYFUS_RS14770	SM00855	Phosphoglycerate mutase family
CYFUS_RS14830	SM00387	Histidine kinase-like ATPases
CYFUS_RS14830	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS14830	SM00448	cheY-homologous receiver domain
CYFUS_RS14855	SM00822	CYFUS_RS14855
CYFUS_RS14875	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS14905	SM00014	Acid phosphatase homologues
CYFUS_RS14920	SM00788	Adenylosuccinate synthetase
CYFUS_RS14930	SM00240	Forkhead associated domain
CYFUS_RS14950	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS14955	SM01058	CarD-like/TRCF domain
CYFUS_RS14960	SM00240	Forkhead associated domain
CYFUS_RS14965	SM00840	CYFUS_RS14965
CYFUS_RS14990	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS14990	SM00091	PAS domain
CYFUS_RS14990	SM00387	Histidine kinase-like ATPases
CYFUS_RS14990	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS14990	SM00448	cheY-homologous receiver domain
CYFUS_RS14995	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS14995	SM00091	PAS domain
CYFUS_RS14995	SM00387	Histidine kinase-like ATPases
CYFUS_RS14995	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS14995	SM00448	cheY-homologous receiver domain
CYFUS_RS15005	SM00830	Chorismate mutase type II
CYFUS_RS15030	SM00487	DEAD-like helicases superfamily
CYFUS_RS15030	SM00490	helicase superfamily c-terminal domain
CYFUS_RS15035	SM00465	GIY-YIG type nucleases (URI domain)
CYFUS_RS15085	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS15085	SM00267	diguanylate cyclase
CYFUS_RS15115	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS15115	SM00924	MgtE intracellular N domain
CYFUS_RS15175	SM00637	CYFUS_RS15175
CYFUS_RS15230	SM00861	Transketolase, pyrimidine binding domain
CYFUS_RS15250	SM00387	Histidine kinase-like ATPases
CYFUS_RS15250	SM00448	cheY-homologous receiver domain
CYFUS_RS15260	SM00448	cheY-homologous receiver domain
CYFUS_RS15305	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS15310	SM00260	Two component signalling adaptor domain
CYFUS_RS15315	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS15320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS15320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS15325	SM00448	cheY-homologous receiver domain
CYFUS_RS15330	SM00260	Two component signalling adaptor domain
CYFUS_RS15335	SM00073	Histidine Phosphotransfer domain
CYFUS_RS15335	SM00260	Two component signalling adaptor domain
CYFUS_RS15335	SM00387	Histidine kinase-like ATPases
CYFUS_RS15335	SM00448	cheY-homologous receiver domain
CYFUS_RS15365	SM00091	PAS domain
CYFUS_RS15365	SM00387	Histidine kinase-like ATPases
CYFUS_RS15365	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS15370	SM00248	ankyrin repeats
CYFUS_RS15395	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS15405	SM00984	UDP binding domain
CYFUS_RS15420	SM00363	S4 RNA-binding domain
CYFUS_RS15420	SM01390	CYFUS_RS15420
CYFUS_RS15425	SM00822	CYFUS_RS15425
CYFUS_RS15480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS15480	SM00387	Histidine kinase-like ATPases
CYFUS_RS15480	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS15495	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS15505	SM00387	Histidine kinase-like ATPases
CYFUS_RS15505	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS15505	SM00448	cheY-homologous receiver domain
CYFUS_RS15520	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS15520	SM00091	PAS domain
CYFUS_RS15520	SM00387	Histidine kinase-like ATPases
CYFUS_RS15520	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS15550	SM00387	Histidine kinase-like ATPases
CYFUS_RS15565	SM00644	CYFUS_RS15565
CYFUS_RS15575	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS15675	SM00642	Alpha-amylase domain
CYFUS_RS15685	SM00148	Phospholipase C, catalytic domain (part); domain X
CYFUS_RS15715	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CYFUS_RS15720	SM00671	Sel1-like repeats.
CYFUS_RS15730	SM00387	Histidine kinase-like ATPases
CYFUS_RS15730	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS15730	SM00448	cheY-homologous receiver domain
CYFUS_RS15800	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS15800	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS15880	SM00635	Bacterial Ig-like domain 2
CYFUS_RS15925	SM00635	Bacterial Ig-like domain 2
CYFUS_RS15955	SM00632	CYFUS_RS15955
CYFUS_RS15955	SM00642	Alpha-amylase domain
CYFUS_RS15955	SM01065	Starch binding domain
CYFUS_RS15960	SM00062	Bacterial periplasmic substrate-binding proteins
CYFUS_RS15975	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYFUS_RS16060	SM00829	Enoylreductase
CYFUS_RS16105	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS16105	SM00091	PAS domain
CYFUS_RS16105	SM00387	Histidine kinase-like ATPases
CYFUS_RS16105	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS16130	SM00060	Fibronectin type 3 domain
CYFUS_RS16130	SM00637	CYFUS_RS16130
CYFUS_RS16140	SM00028	Tetratricopeptide repeats
CYFUS_RS16140	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS16290	SM00882	Coenzyme A transferase
CYFUS_RS16295	SM00882	Coenzyme A transferase
CYFUS_RS16345	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS16350	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS16380	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS16445	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS16445	SM01080	CYFUS_RS16445
CYFUS_RS16465	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CYFUS_RS16480	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS16500	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS16500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS16510	SM00481	DNA polymerase alpha chain like domain
CYFUS_RS16565	SM00822	CYFUS_RS16565
CYFUS_RS16670	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS16670	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS16680	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS16700	SM00481	DNA polymerase alpha chain like domain
CYFUS_RS16700	SM00483	DNA polymerase X family
CYFUS_RS16710	SM00852	Probable molybdopterin binding domain
CYFUS_RS16760	SM00710	Parallel beta-helix repeats
CYFUS_RS16765	SM00028	Tetratricopeptide repeats
CYFUS_RS16825	SM00320	WD40 repeats
CYFUS_RS16870	SM00633	Glycosyl hydrolase family 10
CYFUS_RS16870	SM01067	Cellulose binding domain
CYFUS_RS16875	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CYFUS_RS16890	SM00560	LamG-like jellyroll fold domain
CYFUS_RS16890	SM00758	CYFUS_RS16890
CYFUS_RS16955	SM00567	E-Z type HEAT repeats
CYFUS_RS16980	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CYFUS_RS17005	SM00060	Fibronectin type 3 domain
CYFUS_RS17005	SM00646	CYFUS_RS17005
CYFUS_RS17010	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CYFUS_RS17085	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CYFUS_RS17135	SM01236	CYFUS_RS17135
CYFUS_RS17140	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS17145	SM00612	CYFUS_RS17145
CYFUS_RS17150	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS17150	SM00448	cheY-homologous receiver domain
CYFUS_RS17155	SM00387	Histidine kinase-like ATPases
CYFUS_RS17185	SM00320	WD40 repeats
CYFUS_RS17215	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS17215	SM00091	PAS domain
CYFUS_RS17215	SM00387	Histidine kinase-like ATPases
CYFUS_RS17220	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS17230	SM00387	Histidine kinase-like ATPases
CYFUS_RS17265	SM00798	AICARFT/IMPCHase bienzyme
CYFUS_RS17265	SM00851	MGS-like domain
CYFUS_RS17270	SM00028	Tetratricopeptide repeats
CYFUS_RS17275	SM01209	CYFUS_RS17275
CYFUS_RS17275	SM01210	CYFUS_RS17275
CYFUS_RS17295	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS17305	SM00465	GIY-YIG type nucleases (URI domain)
CYFUS_RS17330	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS17335	SM00448	cheY-homologous receiver domain
CYFUS_RS17345	SM00822	CYFUS_RS17345
CYFUS_RS17355	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS17365	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS17365	SM00091	PAS domain
CYFUS_RS17385	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS17385	SM00419	helix_turn_helix, cAMP Regulatory protein
CYFUS_RS17420	SM00108	Bulb-type mannose-specific lectin
CYFUS_RS17480	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS17500	SM00448	cheY-homologous receiver domain
CYFUS_RS17500	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS17510	SM00091	PAS domain
CYFUS_RS17510	SM00387	Histidine kinase-like ATPases
CYFUS_RS17510	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS17515	SM00448	cheY-homologous receiver domain
CYFUS_RS17515	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS17545	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS17550	SM00822	CYFUS_RS17550
CYFUS_RS17560	SM00825	Beta-ketoacyl synthase
CYFUS_RS17595	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS17635	SM00448	cheY-homologous receiver domain
CYFUS_RS17640	SM00073	Histidine Phosphotransfer domain
CYFUS_RS17640	SM00260	Two component signalling adaptor domain
CYFUS_RS17640	SM00387	Histidine kinase-like ATPases
CYFUS_RS17640	SM01231	CYFUS_RS17640
CYFUS_RS17645	SM00260	Two component signalling adaptor domain
CYFUS_RS17650	SM00260	Two component signalling adaptor domain
CYFUS_RS17655	SM00185	Armadillo/beta-catenin-like repeats
CYFUS_RS17655	SM00567	E-Z type HEAT repeats
CYFUS_RS17660	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS17665	SM00448	cheY-homologous receiver domain
CYFUS_RS17695	SM00387	Histidine kinase-like ATPases
CYFUS_RS17730	SM00448	cheY-homologous receiver domain
CYFUS_RS17735	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS17735	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS17750	SM00448	cheY-homologous receiver domain
CYFUS_RS17775	SM00028	Tetratricopeptide repeats
CYFUS_RS17790	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS17805	SM00937	CYFUS_RS17805
CYFUS_RS17830	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS17840	SM00935	Outer membrane protein (OmpH-like)
CYFUS_RS17885	SM00448	cheY-homologous receiver domain
CYFUS_RS17890	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS17895	SM00481	DNA polymerase alpha chain like domain
CYFUS_RS17940	SM00072	Guanylate kinase homologues.
CYFUS_RS18015	SM00240	Forkhead associated domain
CYFUS_RS18015	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS18020	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS18060	SM00896	Ferredoxin-fold anticodon binding domain
CYFUS_RS18085	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS18085	SM00091	PAS domain
CYFUS_RS18085	SM00387	Histidine kinase-like ATPases
CYFUS_RS18085	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS18085	SM00448	cheY-homologous receiver domain
CYFUS_RS18110	SM00028	Tetratricopeptide repeats
CYFUS_RS18120	SM01067	Cellulose binding domain
CYFUS_RS18200	SM00670	Large family of predicted nucleotide-binding domains
CYFUS_RS18240	SM01120	CYFUS_RS18240
CYFUS_RS18300	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS18320	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS18330	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS18330	SM00954	Region found in RelA / SpoT proteins
CYFUS_RS18345	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS18370	SM00267	diguanylate cyclase
CYFUS_RS18370	SM00448	cheY-homologous receiver domain
CYFUS_RS18375	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS18375	SM00448	cheY-homologous receiver domain
CYFUS_RS18380	SM00829	Enoylreductase
CYFUS_RS18420	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS18440	SM00487	DEAD-like helicases superfamily
CYFUS_RS18440	SM00490	helicase superfamily c-terminal domain
CYFUS_RS18445	SM00387	Histidine kinase-like ATPases
CYFUS_RS18445	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS18455	SM00028	Tetratricopeptide repeats
CYFUS_RS18505	SM00091	PAS domain
CYFUS_RS18505	SM00387	Histidine kinase-like ATPases
CYFUS_RS18505	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS18540	SM01266	CYFUS_RS18540
CYFUS_RS18550	SM00642	Alpha-amylase domain
CYFUS_RS18700	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS18700	SM00448	cheY-homologous receiver domain
CYFUS_RS18705	SM00060	Fibronectin type 3 domain
CYFUS_RS18705	SM00495	Chitin-binding domain type 3
CYFUS_RS18705	SM00636	CYFUS_RS18705
CYFUS_RS18720	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS18740	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS18755	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS18770	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CYFUS_RS18815	SM00450	Rhodanese Homology Domain
CYFUS_RS18820	SM00460	Transglutaminase/protease-like homologues
CYFUS_RS18835	SM00060	Fibronectin type 3 domain
CYFUS_RS18840	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CYFUS_RS18850	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CYFUS_RS18890	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS18890	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS18905	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS18930	SM00387	Histidine kinase-like ATPases
CYFUS_RS18930	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS18935	SM00448	cheY-homologous receiver domain
CYFUS_RS18940	SM00387	Histidine kinase-like ATPases
CYFUS_RS18940	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS18940	SM00448	cheY-homologous receiver domain
CYFUS_RS18955	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS18960	SM00448	cheY-homologous receiver domain
CYFUS_RS18960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS19015	SM00955	CYFUS_RS19015
CYFUS_RS19035	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS19045	SM00994	ClpX C4-type zinc finger
CYFUS_RS19055	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS19065	SM00852	Probable molybdopterin binding domain
CYFUS_RS19075	SM00316	Ribosomal protein S1-like RNA-binding domain
CYFUS_RS19075	SM00357	Cold shock protein domain
CYFUS_RS19075	SM00955	CYFUS_RS19075
CYFUS_RS19080	SM00487	DEAD-like helicases superfamily
CYFUS_RS19080	SM00490	helicase superfamily c-terminal domain
CYFUS_RS19085	SM00463	Small MutS-related domain
CYFUS_RS19085	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CYFUS_RS19085	SM00534	ATPase domain of DNA mismatch repair MUTS family
CYFUS_RS19095	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS19135	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS19150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS19150	SM00387	Histidine kinase-like ATPases
CYFUS_RS19150	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS19170	SM00387	Histidine kinase-like ATPases
CYFUS_RS19170	SM00448	cheY-homologous receiver domain
CYFUS_RS19195	SM00257	Lysin motif
CYFUS_RS19215	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS19215	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS19235	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS19270	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CYFUS_RS19290	SM01359	CYFUS_RS19290
CYFUS_RS19290	SM01360	CYFUS_RS19290
CYFUS_RS19365	SM01043	Bacterial transcriptional activator domain
CYFUS_RS19450	SM00448	cheY-homologous receiver domain
CYFUS_RS19465	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CYFUS_RS19465	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CYFUS_RS19480	SM00448	cheY-homologous receiver domain
CYFUS_RS19485	SM00448	cheY-homologous receiver domain
CYFUS_RS19490	SM00260	Two component signalling adaptor domain
CYFUS_RS19500	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS19505	SM00073	Histidine Phosphotransfer domain
CYFUS_RS19505	SM00260	Two component signalling adaptor domain
CYFUS_RS19505	SM00387	Histidine kinase-like ATPases
CYFUS_RS19505	SM00448	cheY-homologous receiver domain
CYFUS_RS19505	SM01231	CYFUS_RS19505
CYFUS_RS19515	SM00028	Tetratricopeptide repeats
CYFUS_RS19515	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS19530	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
CYFUS_RS19560	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS19560	SM00091	PAS domain
CYFUS_RS19560	SM00387	Histidine kinase-like ATPases
CYFUS_RS19560	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS19580	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS19590	SM01004	Delta-aminolevulinic acid dehydratase
CYFUS_RS19620	SM00020	Trypsin-like serine protease
CYFUS_RS19625	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS19650	SM00387	Histidine kinase-like ATPases
CYFUS_RS19650	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS19655	SM00448	cheY-homologous receiver domain
CYFUS_RS19655	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS19680	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS19680	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS19680	SM00387	Histidine kinase-like ATPases
CYFUS_RS19715	SM00320	WD40 repeats
CYFUS_RS19795	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS19795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS19795	SM00091	PAS domain
CYFUS_RS19795	SM00387	Histidine kinase-like ATPases
CYFUS_RS19795	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS19795	SM00448	cheY-homologous receiver domain
CYFUS_RS19825	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS19825	SM00448	cheY-homologous receiver domain
CYFUS_RS19830	SM00387	Histidine kinase-like ATPases
CYFUS_RS19895	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS19895	SM00994	ClpX C4-type zinc finger
CYFUS_RS19895	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS19905	SM00612	CYFUS_RS19905
CYFUS_RS19915	SM00763	PrkA AAA domain
CYFUS_RS19935	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS19935	SM00448	cheY-homologous receiver domain
CYFUS_RS19940	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS19970	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS19975	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS20000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYFUS_RS20015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS20015	SM00387	Histidine kinase-like ATPases
CYFUS_RS20015	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS20020	SM00060	Fibronectin type 3 domain
CYFUS_RS20020	SM00458	Ricin-type beta-trefoil
CYFUS_RS20025	SM00903	Flavin reductase like domain
CYFUS_RS20070	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS20090	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS20095	SM00062	Bacterial periplasmic substrate-binding proteins
CYFUS_RS20110	SM00495	Chitin-binding domain type 3
CYFUS_RS20110	SM00636	CYFUS_RS20110
CYFUS_RS20115	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CYFUS_RS20150	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS20160	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS20250	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS20255	SM00448	cheY-homologous receiver domain
CYFUS_RS20255	SM00850	LytTr DNA-binding domain
CYFUS_RS20285	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS20345	SM00612	CYFUS_RS20345
CYFUS_RS20395	SM00645	Papain family cysteine protease
CYFUS_RS20435	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS20435	SM00387	Histidine kinase-like ATPases
CYFUS_RS20435	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS20465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS20490	SM00420	helix_turn_helix, Deoxyribose operon repressor
CYFUS_RS20490	SM01134	CYFUS_RS20490
CYFUS_RS20520	SM00507	HNH nucleases
CYFUS_RS20540	SM00363	S4 RNA-binding domain
CYFUS_RS20575	SM00460	Transglutaminase/protease-like homologues
CYFUS_RS20640	SM00028	Tetratricopeptide repeats
CYFUS_RS20645	SM00028	Tetratricopeptide repeats
CYFUS_RS20695	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS20765	SM00710	Parallel beta-helix repeats
CYFUS_RS20810	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS20845	SM00028	Tetratricopeptide repeats
CYFUS_RS20890	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS20895	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CYFUS_RS20920	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS20935	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS20985	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS20995	SM00028	Tetratricopeptide repeats
CYFUS_RS20995	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS21015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS21015	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS21015	SM00387	Histidine kinase-like ATPases
CYFUS_RS21020	SM00387	Histidine kinase-like ATPases
CYFUS_RS21035	SM00091	PAS domain
CYFUS_RS21035	SM00387	Histidine kinase-like ATPases
CYFUS_RS21035	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS21040	SM00346	helix_turn_helix isocitrate lyase regulation
CYFUS_RS21090	SM00226	Low molecular weight phosphatase family
CYFUS_RS21100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYFUS_RS21160	SM00563	Phosphate acyltransferases
CYFUS_RS21165	SM00836	DALR anticodon binding domain
CYFUS_RS21165	SM01016	Arginyl tRNA synthetase N terminal dom
CYFUS_RS21170	SM00387	Histidine kinase-like ATPases
CYFUS_RS21170	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS21170	SM00448	cheY-homologous receiver domain
CYFUS_RS21180	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS21205	SM00838	Elongation factor G C-terminus
CYFUS_RS21205	SM00889	Elongation factor G, domain IV
CYFUS_RS21215	SM01403	CYFUS_RS21215
CYFUS_RS21230	SM01382	CYFUS_RS21230
CYFUS_RS21230	SM01383	CYFUS_RS21230
CYFUS_RS21245	SM00322	K homology RNA-binding domain
CYFUS_RS21265	SM01374	CYFUS_RS21265
CYFUS_RS21270	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CYFUS_RS21325	SM00316	Ribosomal protein S1-like RNA-binding domain
CYFUS_RS21345	SM00363	S4 RNA-binding domain
CYFUS_RS21345	SM01390	CYFUS_RS21345
CYFUS_RS21350	SM00662	RNA polymerases D
CYFUS_RS21365	SM00028	Tetratricopeptide repeats
CYFUS_RS21370	SM00563	Phosphate acyltransferases
CYFUS_RS21390	SM00240	Forkhead associated domain
CYFUS_RS21435	SM00240	Forkhead associated domain
CYFUS_RS21435	SM00267	diguanylate cyclase
CYFUS_RS21515	SM00563	Phosphate acyltransferases
CYFUS_RS21525	SM00853	MutL C terminal dimerisation domain
CYFUS_RS21525	SM01340	CYFUS_RS21525
CYFUS_RS21545	SM00240	Forkhead associated domain
CYFUS_RS21555	SM00487	DEAD-like helicases superfamily
CYFUS_RS21555	SM00490	helicase superfamily c-terminal domain
CYFUS_RS21585	SM00409	Immunoglobulin
CYFUS_RS21585	SM00635	Bacterial Ig-like domain 2
CYFUS_RS21595	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS21595	SM00091	PAS domain
CYFUS_RS21595	SM00387	Histidine kinase-like ATPases
CYFUS_RS21595	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS21600	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CYFUS_RS21630	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS21680	SM00852	Probable molybdopterin binding domain
CYFUS_RS21685	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS21725	SM00028	Tetratricopeptide repeats
CYFUS_RS21735	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS21750	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS21750	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS21750	SM00387	Histidine kinase-like ATPases
CYFUS_RS21820	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYFUS_RS21890	SM00429	ig-like, plexins, transcription factors
CYFUS_RS21975	SM00448	cheY-homologous receiver domain
CYFUS_RS22010	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS22075	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS22135	SM01022	CYFUS_RS22135
CYFUS_RS22150	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS22160	SM00823	Phosphopantetheine attachment site
CYFUS_RS22190	SM00028	Tetratricopeptide repeats
CYFUS_RS22195	SM00448	cheY-homologous receiver domain
CYFUS_RS22205	SM00387	Histidine kinase-like ATPases
CYFUS_RS22205	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS22205	SM00448	cheY-homologous receiver domain
CYFUS_RS22210	SM00267	diguanylate cyclase
CYFUS_RS22210	SM00448	cheY-homologous receiver domain
CYFUS_RS22220	SM00448	cheY-homologous receiver domain
CYFUS_RS22265	SM01192	CYFUS_RS22265
CYFUS_RS22265	SM01193	CYFUS_RS22265
CYFUS_RS22275	SM00257	Lysin motif
CYFUS_RS22285	SM00028	Tetratricopeptide repeats
CYFUS_RS22325	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS22335	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS22335	SM00267	diguanylate cyclase
CYFUS_RS22335	SM00387	Histidine kinase-like ATPases
CYFUS_RS22335	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS22335	SM00448	cheY-homologous receiver domain
CYFUS_RS22340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS22340	SM00387	Histidine kinase-like ATPases
CYFUS_RS22340	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS22380	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS22405	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS22425	SM00073	Histidine Phosphotransfer domain
CYFUS_RS22425	SM00260	Two component signalling adaptor domain
CYFUS_RS22425	SM00387	Histidine kinase-like ATPases
CYFUS_RS22425	SM01231	CYFUS_RS22425
CYFUS_RS22430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS22430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS22435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS22435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS22440	SM00260	Two component signalling adaptor domain
CYFUS_RS22445	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS22450	SM00054	EF-hand, calcium binding motif
CYFUS_RS22465	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS22465	SM00930	CYFUS_RS22465
CYFUS_RS22485	SM00387	Histidine kinase-like ATPases
CYFUS_RS22490	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CYFUS_RS22515	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYFUS_RS22525	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS22530	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS22555	SM01130	CYFUS_RS22555
CYFUS_RS22570	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CYFUS_RS22580	SM00858	CYFUS_RS22580
CYFUS_RS22625	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS22680	SM00400	zinc finger
CYFUS_RS22685	SM00400	zinc finger
CYFUS_RS22725	SM00855	Phosphoglycerate mutase family
CYFUS_RS22800	SM00838	Elongation factor G C-terminus
CYFUS_RS22820	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CYFUS_RS22830	SM00612	CYFUS_RS22830
CYFUS_RS22845	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS22845	SM00091	PAS domain
CYFUS_RS22845	SM00387	Histidine kinase-like ATPases
CYFUS_RS22845	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS22850	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS22850	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS22850	SM00387	Histidine kinase-like ATPases
CYFUS_RS22915	SM00860	SMI1 / KNR4 family
CYFUS_RS22940	SM00245	tail specific protease
CYFUS_RS23045	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CYFUS_RS23075	SM01329	CYFUS_RS23075
CYFUS_RS23100	SM00881	CoA binding domain
CYFUS_RS23105	SM00562	CYFUS_RS23105
CYFUS_RS23170	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS23170	SM00448	cheY-homologous receiver domain
CYFUS_RS23180	SM00316	Ribosomal protein S1-like RNA-binding domain
CYFUS_RS23200	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS23200	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS23200	SM00387	Histidine kinase-like ATPases
CYFUS_RS23240	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS23275	SM00710	Parallel beta-helix repeats
CYFUS_RS23305	SM00060	Fibronectin type 3 domain
CYFUS_RS23325	SM00822	CYFUS_RS23325
CYFUS_RS23335	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS23340	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS23345	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS23380	SM00387	Histidine kinase-like ATPases
CYFUS_RS23395	SM00387	Histidine kinase-like ATPases
CYFUS_RS23395	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS23400	SM00448	cheY-homologous receiver domain
CYFUS_RS23400	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS23420	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS23425	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CYFUS_RS23435	SM00073	Histidine Phosphotransfer domain
CYFUS_RS23475	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS23480	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS23480	SM00448	cheY-homologous receiver domain
CYFUS_RS23485	SM00387	Histidine kinase-like ATPases
CYFUS_RS23500	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS23535	SM00947	Carbonic anhydrase
CYFUS_RS23545	SM00387	Histidine kinase-like ATPases
CYFUS_RS23545	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS23565	SM00996	S-adenosyl-L-homocysteine hydrolase
CYFUS_RS23565	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CYFUS_RS23580	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS23600	SM00357	Cold shock protein domain
CYFUS_RS23650	SM00986	Uracil DNA glycosylase superfamily
CYFUS_RS23650	SM00987	UreE urease accessory protein, C-terminal domain 
CYFUS_RS23660	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CYFUS_RS23685	SM00873	B3/4 domain
CYFUS_RS23685	SM00874	tRNA synthetase B5 domain
CYFUS_RS23685	SM00896	Ferredoxin-fold anticodon binding domain
CYFUS_RS23690	SM00411	bacterial (prokaryotic) histone like domain
CYFUS_RS23745	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS23815	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS23830	SM00387	Histidine kinase-like ATPases
CYFUS_RS23830	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS23830	SM00448	cheY-homologous receiver domain
CYFUS_RS23875	SM00448	cheY-homologous receiver domain
CYFUS_RS23875	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS23880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS23880	SM00387	Histidine kinase-like ATPases
CYFUS_RS23880	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS23885	SM00829	Enoylreductase
CYFUS_RS23905	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS23915	SM00947	Carbonic anhydrase
CYFUS_RS23920	SM00612	CYFUS_RS23920
CYFUS_RS23940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS23940	SM00387	Histidine kinase-like ATPases
CYFUS_RS24010	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CYFUS_RS24010	SM00534	ATPase domain of DNA mismatch repair MUTS family
CYFUS_RS24150	SM00387	Histidine kinase-like ATPases
CYFUS_RS24160	SM00646	CYFUS_RS24160
CYFUS_RS24175	SM00829	Enoylreductase
CYFUS_RS24190	SM00829	Enoylreductase
CYFUS_RS24265	SM00248	ankyrin repeats
CYFUS_RS24275	SM00829	Enoylreductase
CYFUS_RS24305	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS24310	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS24315	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CYFUS_RS24340	SM00487	DEAD-like helicases superfamily
CYFUS_RS24340	SM00490	helicase superfamily c-terminal domain
CYFUS_RS24340	SM00847	Helicase associated domain (HA2)  Add an annotation
CYFUS_RS24410	SM00363	S4 RNA-binding domain
CYFUS_RS24415	SM00567	E-Z type HEAT repeats
CYFUS_RS24450	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS24455	SM00829	Enoylreductase
CYFUS_RS24485	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS24515	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS24570	SM00458	Ricin-type beta-trefoil
CYFUS_RS24605	SM00458	Ricin-type beta-trefoil
CYFUS_RS24610	SM00387	Histidine kinase-like ATPases
CYFUS_RS24610	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS24615	SM00448	cheY-homologous receiver domain
CYFUS_RS24615	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS24620	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS24635	SM00487	DEAD-like helicases superfamily
CYFUS_RS24680	SM01007	Class II Aldolase and Adducin N-terminal domain
CYFUS_RS24695	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS24715	SM00354	helix_turn _helix lactose operon repressor
CYFUS_RS24730	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS24750	SM00458	Ricin-type beta-trefoil
CYFUS_RS24755	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS24780	SM00108	Bulb-type mannose-specific lectin
CYFUS_RS24800	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS24800	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS24805	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS24805	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS24810	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS24810	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS24850	SM00387	Histidine kinase-like ATPases
CYFUS_RS24860	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS24945	SM00028	Tetratricopeptide repeats
CYFUS_RS24970	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS24970	SM00448	cheY-homologous receiver domain
CYFUS_RS24975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS24975	SM00387	Histidine kinase-like ATPases
CYFUS_RS24975	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS24985	SM00822	CYFUS_RS24985
CYFUS_RS25030	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS25035	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS25125	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS25130	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS25140	SM00612	CYFUS_RS25140
CYFUS_RS25150	SM00822	CYFUS_RS25150
CYFUS_RS25215	SM00448	cheY-homologous receiver domain
CYFUS_RS25215	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS25220	SM00387	Histidine kinase-like ATPases
CYFUS_RS25220	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS25235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS25235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS25245	SM00028	Tetratricopeptide repeats
CYFUS_RS25320	SM00062	Bacterial periplasmic substrate-binding proteins
CYFUS_RS25320	SM00830	Chorismate mutase type II
CYFUS_RS25340	SM00829	Enoylreductase
CYFUS_RS25485	SM00478	endonuclease III
CYFUS_RS25485	SM00525	CYFUS_RS25485
CYFUS_RS25490	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS25530	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS25535	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS25605	SM00316	Ribosomal protein S1-like RNA-binding domain
CYFUS_RS25615	SM00882	Coenzyme A transferase
CYFUS_RS25620	SM00882	Coenzyme A transferase
CYFUS_RS25650	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS25660	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS25705	SM00564	beta-propeller repeat
CYFUS_RS25715	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS25725	SM00358	Double-stranded RNA binding motif
CYFUS_RS25725	SM00535	Ribonuclease III family
CYFUS_RS25765	SM00867	YceI-like domain 
CYFUS_RS25770	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS25780	SM00257	Lysin motif
CYFUS_RS25795	SM00978	CYFUS_RS25795
CYFUS_RS25800	SM00420	helix_turn_helix, Deoxyribose operon repressor
CYFUS_RS25800	SM01134	CYFUS_RS25800
CYFUS_RS25850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS25895	SM00825	Beta-ketoacyl synthase
CYFUS_RS25910	SM00257	Lysin motif
CYFUS_RS25915	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS25985	SM00257	Lysin motif
CYFUS_RS26035	SM01133	CYFUS_RS26035
CYFUS_RS26065	SM00448	cheY-homologous receiver domain
CYFUS_RS26080	SM00267	diguanylate cyclase
CYFUS_RS26080	SM00448	cheY-homologous receiver domain
CYFUS_RS26085	SM00448	cheY-homologous receiver domain
CYFUS_RS26110	SM00487	DEAD-like helicases superfamily
CYFUS_RS26110	SM00490	helicase superfamily c-terminal domain
CYFUS_RS26125	SM00671	Sel1-like repeats.
CYFUS_RS26175	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS26280	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS26320	SM00091	PAS domain
CYFUS_RS26320	SM00387	Histidine kinase-like ATPases
CYFUS_RS26320	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS26345	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS26345	SM00448	cheY-homologous receiver domain
CYFUS_RS26400	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CYFUS_RS26405	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS26415	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS26415	SM00267	diguanylate cyclase
CYFUS_RS26445	SM00834	Putative regulatory protein
CYFUS_RS26470	SM00481	DNA polymerase alpha chain like domain
CYFUS_RS26485	SM00642	Alpha-amylase domain
CYFUS_RS26490	SM00642	Alpha-amylase domain
CYFUS_RS26500	SM00642	Alpha-amylase domain
CYFUS_RS26550	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS26560	SM00387	Histidine kinase-like ATPases
CYFUS_RS26560	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS26575	SM00919	Malic enzyme, NAD binding domain
CYFUS_RS26575	SM01274	CYFUS_RS26575
CYFUS_RS26660	SM00829	Enoylreductase
CYFUS_RS26665	SM00644	CYFUS_RS26665
CYFUS_RS26710	SM00235	Zinc-dependent metalloprotease
CYFUS_RS26710	SM00458	Ricin-type beta-trefoil
CYFUS_RS26745	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS26780	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS26815	SM00320	WD40 repeats
CYFUS_RS26860	SM00612	CYFUS_RS26860
CYFUS_RS26980	SM01351	CYFUS_RS26980
CYFUS_RS27130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS27130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS27145	SM01260	CYFUS_RS27145
CYFUS_RS27155	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27165	SM00612	CYFUS_RS27165
CYFUS_RS27205	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS27210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS27210	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27225	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS27230	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS27230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS27230	SM00240	Forkhead associated domain
CYFUS_RS27280	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS27280	SM00267	diguanylate cyclase
CYFUS_RS27280	SM01079	CYFUS_RS27280
CYFUS_RS27310	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS27315	SM00320	WD40 repeats
CYFUS_RS27350	SM00857	Resolvase, N terminal domain
CYFUS_RS27415	SM00822	CYFUS_RS27415
CYFUS_RS27440	SM00563	Phosphate acyltransferases
CYFUS_RS27470	SM00387	Histidine kinase-like ATPases
CYFUS_RS27470	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS27480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS27480	SM00091	PAS domain
CYFUS_RS27480	SM00387	Histidine kinase-like ATPases
CYFUS_RS27480	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS27540	SM00481	DNA polymerase alpha chain like domain
CYFUS_RS27555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYFUS_RS27565	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS27570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS27570	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS27570	SM00387	Histidine kinase-like ATPases
CYFUS_RS27600	SM00822	CYFUS_RS27600
CYFUS_RS27615	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS27620	SM00387	Histidine kinase-like ATPases
CYFUS_RS27620	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS27635	SM01043	Bacterial transcriptional activator domain
CYFUS_RS27640	SM00823	Phosphopantetheine attachment site
CYFUS_RS27640	SM00825	Beta-ketoacyl synthase
CYFUS_RS27640	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS27640	SM01294	CYFUS_RS27640
CYFUS_RS27650	SM00823	Phosphopantetheine attachment site
CYFUS_RS27650	SM01294	CYFUS_RS27650
CYFUS_RS27655	SM00822	CYFUS_RS27655
CYFUS_RS27665	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27670	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27680	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS27730	SM00387	Histidine kinase-like ATPases
CYFUS_RS27755	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27785	SM00054	EF-hand, calcium binding motif
CYFUS_RS27835	SM00900	CYFUS_RS27835
CYFUS_RS27880	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27880	SM00464	Found in ATP-dependent protease La (LON)
CYFUS_RS27900	SM00240	Forkhead associated domain
CYFUS_RS27915	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27945	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS27975	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS27975	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS27990	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYFUS_RS28035	SM00860	SMI1 / KNR4 family
CYFUS_RS28050	SM00235	Zinc-dependent metalloprotease
CYFUS_RS28080	SM01269	CYFUS_RS28080
CYFUS_RS28095	SM00181	Epidermal growth factor-like domain.
CYFUS_RS28105	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS28125	SM00060	Fibronectin type 3 domain
CYFUS_RS28125	SM00642	Alpha-amylase domain
CYFUS_RS28125	SM01066	Carbohydrate binding domain
CYFUS_RS28175	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS28185	SM00091	PAS domain
CYFUS_RS28185	SM00387	Histidine kinase-like ATPases
CYFUS_RS28195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS28195	SM00387	Histidine kinase-like ATPases
CYFUS_RS28225	SM00823	Phosphopantetheine attachment site
CYFUS_RS28240	SM00823	Phosphopantetheine attachment site
CYFUS_RS28240	SM00825	Beta-ketoacyl synthase
CYFUS_RS28240	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS28250	SM00851	MGS-like domain
CYFUS_RS28250	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CYFUS_RS28320	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS28335	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS28345	SM00838	Elongation factor G C-terminus
CYFUS_RS28350	SM00028	Tetratricopeptide repeats
CYFUS_RS28410	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CYFUS_RS28560	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS28685	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS28690	SM00977	TilS substrate C-terminal domain
CYFUS_RS28730	SM00091	PAS domain
CYFUS_RS28730	SM00387	Histidine kinase-like ATPases
CYFUS_RS28730	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS28730	SM00448	cheY-homologous receiver domain
CYFUS_RS28805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS28805	SM00091	PAS domain
CYFUS_RS28805	SM00387	Histidine kinase-like ATPases
CYFUS_RS28805	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS28810	SM00387	Histidine kinase-like ATPases
CYFUS_RS28810	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS28810	SM00448	cheY-homologous receiver domain
CYFUS_RS28815	SM00822	CYFUS_RS28815
CYFUS_RS28830	SM00986	Uracil DNA glycosylase superfamily
CYFUS_RS28830	SM00987	UreE urease accessory protein, C-terminal domain 
CYFUS_RS28855	SM00860	SMI1 / KNR4 family
CYFUS_RS28885	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS28920	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS28990	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS28990	SM01080	CYFUS_RS28990
CYFUS_RS29000	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS29000	SM00331	Sigma factor PP2C-like phosphatases
CYFUS_RS29000	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CYFUS_RS29005	SM00240	Forkhead associated domain
CYFUS_RS29020	SM00822	CYFUS_RS29020
CYFUS_RS29080	SM00823	Phosphopantetheine attachment site
CYFUS_RS29080	SM00824	Thioesterase
CYFUS_RS29100	SM00831	Cation transporter/ATPase, N-terminus
CYFUS_RS29110	SM00710	Parallel beta-helix repeats
CYFUS_RS29120	SM00710	Parallel beta-helix repeats
CYFUS_RS29190	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS29225	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS29225	SM00091	PAS domain
CYFUS_RS29225	SM00387	Histidine kinase-like ATPases
CYFUS_RS29225	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS29290	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS29335	SM00255	Toll - interleukin 1 - resistance
CYFUS_RS29355	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS29360	SM00829	Enoylreductase
CYFUS_RS29390	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS29390	SM01260	CYFUS_RS29390
CYFUS_RS29450	SM00387	Histidine kinase-like ATPases
CYFUS_RS29450	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS29450	SM00448	cheY-homologous receiver domain
CYFUS_RS29455	SM00387	Histidine kinase-like ATPases
CYFUS_RS29455	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS29515	SM00320	WD40 repeats
CYFUS_RS29575	SM00387	Histidine kinase-like ATPases
CYFUS_RS29575	SM00448	cheY-homologous receiver domain
CYFUS_RS29580	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS29610	SM00448	cheY-homologous receiver domain
CYFUS_RS29650	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS29670	SM00060	Fibronectin type 3 domain
CYFUS_RS29670	SM01065	Starch binding domain
CYFUS_RS29670	SM01066	Carbohydrate binding domain
CYFUS_RS29700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CYFUS_RS29725	SM00823	Phosphopantetheine attachment site
CYFUS_RS29725	SM00824	Thioesterase
CYFUS_RS29725	SM00825	Beta-ketoacyl synthase
CYFUS_RS29725	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS29750	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS29790	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS29825	SM00829	Enoylreductase
CYFUS_RS29840	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS29880	SM01011	Aminopeptidase P, N-terminal domain
CYFUS_RS29930	SM00861	Transketolase, pyrimidine binding domain
CYFUS_RS29955	SM00487	DEAD-like helicases superfamily
CYFUS_RS29955	SM00490	helicase superfamily c-terminal domain
CYFUS_RS30005	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS30015	SM00240	Forkhead associated domain
CYFUS_RS30025	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS30035	SM00829	Enoylreductase
CYFUS_RS30050	SM00822	CYFUS_RS30050
CYFUS_RS30050	SM00823	Phosphopantetheine attachment site
CYFUS_RS30050	SM00825	Beta-ketoacyl synthase
CYFUS_RS30050	SM00826	CYFUS_RS30050
CYFUS_RS30050	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS30050	SM01294	CYFUS_RS30050
CYFUS_RS30070	SM00823	Phosphopantetheine attachment site
CYFUS_RS30070	SM00824	Thioesterase
CYFUS_RS30075	SM00822	CYFUS_RS30075
CYFUS_RS30075	SM00823	Phosphopantetheine attachment site
CYFUS_RS30075	SM00825	Beta-ketoacyl synthase
CYFUS_RS30075	SM00826	CYFUS_RS30075
CYFUS_RS30075	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS30080	SM00822	CYFUS_RS30080
CYFUS_RS30080	SM00823	Phosphopantetheine attachment site
CYFUS_RS30080	SM00825	Beta-ketoacyl synthase
CYFUS_RS30080	SM00826	CYFUS_RS30080
CYFUS_RS30080	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS30085	SM00822	CYFUS_RS30085
CYFUS_RS30085	SM00823	Phosphopantetheine attachment site
CYFUS_RS30085	SM00825	Beta-ketoacyl synthase
CYFUS_RS30085	SM00826	CYFUS_RS30085
CYFUS_RS30085	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS30085	SM01294	CYFUS_RS30085
CYFUS_RS30090	SM00822	CYFUS_RS30090
CYFUS_RS30090	SM00823	Phosphopantetheine attachment site
CYFUS_RS30090	SM00825	Beta-ketoacyl synthase
CYFUS_RS30090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS30095	SM00823	Phosphopantetheine attachment site
CYFUS_RS30095	SM00825	Beta-ketoacyl synthase
CYFUS_RS30095	SM01294	CYFUS_RS30095
CYFUS_RS30120	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS30140	SM00062	Bacterial periplasmic substrate-binding proteins
CYFUS_RS30155	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS30190	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS30215	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS30230	SM00854	Bacterial capsule synthesis protein PGA_cap
CYFUS_RS30235	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS30245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS30245	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS30245	SM00387	Histidine kinase-like ATPases
CYFUS_RS30260	SM00387	Histidine kinase-like ATPases
CYFUS_RS30360	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS30420	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS30445	SM00028	Tetratricopeptide repeats
CYFUS_RS30475	SM00470	ParB-like nuclease domain
CYFUS_RS30500	SM00028	Tetratricopeptide repeats
CYFUS_RS30505	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS30505	SM00387	Histidine kinase-like ATPases
CYFUS_RS30505	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS30505	SM00448	cheY-homologous receiver domain
CYFUS_RS30510	SM00387	Histidine kinase-like ATPases
CYFUS_RS30510	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS30515	SM00387	Histidine kinase-like ATPases
CYFUS_RS30515	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS30535	SM00363	S4 RNA-binding domain
CYFUS_RS30540	SM00861	Transketolase, pyrimidine binding domain
CYFUS_RS30550	SM00448	cheY-homologous receiver domain
CYFUS_RS30565	SM00240	Forkhead associated domain
CYFUS_RS30580	SM00858	CYFUS_RS30580
CYFUS_RS30635	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS30640	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS30690	SM00448	cheY-homologous receiver domain
CYFUS_RS30690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS30695	SM00567	E-Z type HEAT repeats
CYFUS_RS30705	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS30740	SM00487	DEAD-like helicases superfamily
CYFUS_RS30740	SM00490	helicase superfamily c-terminal domain
CYFUS_RS30750	SM00463	Small MutS-related domain
CYFUS_RS30785	SM00448	cheY-homologous receiver domain
CYFUS_RS30790	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS30845	SM00091	PAS domain
CYFUS_RS30845	SM00387	Histidine kinase-like ATPases
CYFUS_RS30845	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS30850	SM00448	cheY-homologous receiver domain
CYFUS_RS30855	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS30855	SM00448	cheY-homologous receiver domain
CYFUS_RS30865	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS30865	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS30865	SM00091	PAS domain
CYFUS_RS30865	SM00387	Histidine kinase-like ATPases
CYFUS_RS30865	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS30865	SM00448	cheY-homologous receiver domain
CYFUS_RS30870	SM01144	CYFUS_RS30870
CYFUS_RS30915	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CYFUS_RS30935	SM00746	metallochaperone-like domain
CYFUS_RS30965	SM01323	CYFUS_RS30965
CYFUS_RS31070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS31070	SM00387	Histidine kinase-like ATPases
CYFUS_RS31090	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS31090	SM00091	PAS domain
CYFUS_RS31090	SM00387	Histidine kinase-like ATPases
CYFUS_RS31095	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS31130	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS31155	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS31170	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS31170	SM01240	CYFUS_RS31170
CYFUS_RS31180	SM00822	CYFUS_RS31180
CYFUS_RS31195	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS31260	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS31270	SM00308	Lipoxygenase homology 2 (beta barrel) domain
CYFUS_RS31275	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS31545	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS31570	SM00855	Phosphoglycerate mutase family
CYFUS_RS31575	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
CYFUS_RS31585	SM00822	CYFUS_RS31585
CYFUS_RS31585	SM00823	Phosphopantetheine attachment site
CYFUS_RS31585	SM00825	Beta-ketoacyl synthase
CYFUS_RS31585	SM00826	CYFUS_RS31585
CYFUS_RS31585	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS31585	SM00829	Enoylreductase
CYFUS_RS31585	SM01294	CYFUS_RS31585
CYFUS_RS31590	SM00822	CYFUS_RS31590
CYFUS_RS31590	SM00823	Phosphopantetheine attachment site
CYFUS_RS31590	SM00825	Beta-ketoacyl synthase
CYFUS_RS31590	SM00826	CYFUS_RS31590
CYFUS_RS31590	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS31590	SM01294	CYFUS_RS31590
CYFUS_RS31595	SM00822	CYFUS_RS31595
CYFUS_RS31595	SM00823	Phosphopantetheine attachment site
CYFUS_RS31595	SM00825	Beta-ketoacyl synthase
CYFUS_RS31595	SM00826	CYFUS_RS31595
CYFUS_RS31595	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS31595	SM01294	CYFUS_RS31595
CYFUS_RS31600	SM00822	CYFUS_RS31600
CYFUS_RS31600	SM00823	Phosphopantetheine attachment site
CYFUS_RS31600	SM00825	Beta-ketoacyl synthase
CYFUS_RS31600	SM00826	CYFUS_RS31600
CYFUS_RS31600	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS31605	SM00822	CYFUS_RS31605
CYFUS_RS31605	SM00823	Phosphopantetheine attachment site
CYFUS_RS31605	SM00825	Beta-ketoacyl synthase
CYFUS_RS31605	SM00826	CYFUS_RS31605
CYFUS_RS31605	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS31605	SM01294	CYFUS_RS31605
CYFUS_RS31620	SM00387	Histidine kinase-like ATPases
CYFUS_RS31620	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS31625	SM00448	cheY-homologous receiver domain
CYFUS_RS31625	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS31645	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS31655	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS31670	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS31695	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CYFUS_RS31695	SM00474	3'-5' exonuclease
CYFUS_RS31695	SM00475	5'-3' exonuclease
CYFUS_RS31695	SM00482	DNA polymerase A domain
CYFUS_RS31700	SM00240	Forkhead associated domain
CYFUS_RS31705	SM00240	Forkhead associated domain
CYFUS_RS31720	SM00240	Forkhead associated domain
CYFUS_RS31760	SM00028	Tetratricopeptide repeats
CYFUS_RS31785	SM00663	RNA polymerase I subunit A N-terminus
CYFUS_RS31810	SM00649	Ribosomal protein L11/L12
CYFUS_RS31815	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CYFUS_RS31815	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CYFUS_RS31860	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CYFUS_RS31895	SM00487	DEAD-like helicases superfamily
CYFUS_RS31895	SM00490	helicase superfamily c-terminal domain
CYFUS_RS31895	SM00847	Helicase associated domain (HA2)  Add an annotation
CYFUS_RS31920	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYFUS_RS31925	SM00450	Rhodanese Homology Domain
CYFUS_RS31935	SM01211	CYFUS_RS31935
CYFUS_RS31940	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CYFUS_RS31970	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYFUS_RS31980	SM01018	B12 binding domain
CYFUS_RS31985	SM00387	Histidine kinase-like ATPases
CYFUS_RS31985	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS32030	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS32035	SM00091	PAS domain
CYFUS_RS32035	SM00387	Histidine kinase-like ATPases
CYFUS_RS32035	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS32105	SM00860	SMI1 / KNR4 family
CYFUS_RS32110	SM00091	PAS domain
CYFUS_RS32110	SM00387	Histidine kinase-like ATPases
CYFUS_RS32110	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS32110	SM00448	cheY-homologous receiver domain
CYFUS_RS32125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS32125	SM00387	Histidine kinase-like ATPases
CYFUS_RS32125	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS32125	SM00448	cheY-homologous receiver domain
CYFUS_RS32135	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS32155	SM00458	Ricin-type beta-trefoil
CYFUS_RS32175	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS32210	SM00028	Tetratricopeptide repeats
CYFUS_RS32235	SM00710	Parallel beta-helix repeats
CYFUS_RS32265	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS32265	SM00930	CYFUS_RS32265
CYFUS_RS32295	SM00463	Small MutS-related domain
CYFUS_RS32330	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CYFUS_RS32340	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS32340	SM00091	PAS domain
CYFUS_RS32340	SM00387	Histidine kinase-like ATPases
CYFUS_RS32340	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS32350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CYFUS_RS32350	SM00895	CYFUS_RS32350
CYFUS_RS32385	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS32410	SM00458	Ricin-type beta-trefoil
CYFUS_RS32420	SM00155	Phospholipase D. Active site motifs.
CYFUS_RS32440	SM01133	CYFUS_RS32440
CYFUS_RS32460	SM01236	CYFUS_RS32460
CYFUS_RS32575	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS32575	SM01091	Transporter associated domain
CYFUS_RS32590	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS32590	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS32640	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CYFUS_RS32640	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CYFUS_RS32640	SM00493	CYFUS_RS32640
CYFUS_RS32650	SM00257	Lysin motif
CYFUS_RS32665	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS32665	SM00267	diguanylate cyclase
CYFUS_RS32665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS32670	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS32690	SM00448	cheY-homologous receiver domain
CYFUS_RS32700	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS32710	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS32735	SM00028	Tetratricopeptide repeats
CYFUS_RS32765	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS32765	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS32765	SM00387	Histidine kinase-like ATPases
CYFUS_RS32770	SM00363	S4 RNA-binding domain
CYFUS_RS32825	SM00257	Lysin motif
CYFUS_RS32835	SM00636	CYFUS_RS32835
CYFUS_RS32860	SM00260	Two component signalling adaptor domain
CYFUS_RS32865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS32865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS32870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS32870	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS32870	SM00387	Histidine kinase-like ATPases
CYFUS_RS32870	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS32925	SM00028	Tetratricopeptide repeats
CYFUS_RS33030	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS33045	SM00567	E-Z type HEAT repeats
CYFUS_RS33060	SM00825	Beta-ketoacyl synthase
CYFUS_RS33060	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS33065	SM00822	CYFUS_RS33065
CYFUS_RS33065	SM00823	Phosphopantetheine attachment site
CYFUS_RS33065	SM00825	Beta-ketoacyl synthase
CYFUS_RS33065	SM00826	CYFUS_RS33065
CYFUS_RS33065	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS33065	SM01294	CYFUS_RS33065
CYFUS_RS33070	SM00822	CYFUS_RS33070
CYFUS_RS33070	SM00823	Phosphopantetheine attachment site
CYFUS_RS33070	SM00825	Beta-ketoacyl synthase
CYFUS_RS33070	SM00826	CYFUS_RS33070
CYFUS_RS33070	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS33070	SM00829	Enoylreductase
CYFUS_RS33070	SM01294	CYFUS_RS33070
CYFUS_RS33085	SM00448	cheY-homologous receiver domain
CYFUS_RS33090	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS33140	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS33155	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS33240	SM00823	Phosphopantetheine attachment site
CYFUS_RS33240	SM00824	Thioesterase
CYFUS_RS33270	SM00823	Phosphopantetheine attachment site
CYFUS_RS33285	SM01209	CYFUS_RS33285
CYFUS_RS33375	SM00458	Ricin-type beta-trefoil
CYFUS_RS33460	SM00990	CYFUS_RS33460
CYFUS_RS33500	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS33500	SM00962	SRP54-type protein, GTPase domain
CYFUS_RS33500	SM00963	SRP54-type protein, helical bundle domain
CYFUS_RS33530	SM00028	Tetratricopeptide repeats
CYFUS_RS33545	SM00240	Forkhead associated domain
CYFUS_RS33555	SM00028	Tetratricopeptide repeats
CYFUS_RS33570	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS33585	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS33640	SM01409	CYFUS_RS33640
CYFUS_RS33660	SM00883	Chaperonin 10 Kd subunit
CYFUS_RS33680	SM00240	Forkhead associated domain
CYFUS_RS33680	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS33690	SM00968	SMC proteins Flexible Hinge Domain
CYFUS_RS33695	SM01091	Transporter associated domain
CYFUS_RS33700	SM00028	Tetratricopeptide repeats
CYFUS_RS33705	SM00937	CYFUS_RS33705
CYFUS_RS33735	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS33770	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS33775	SM00028	Tetratricopeptide repeats
CYFUS_RS33790	SM00028	Tetratricopeptide repeats
CYFUS_RS33845	SM00062	Bacterial periplasmic substrate-binding proteins
CYFUS_RS33845	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CYFUS_RS33855	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS33905	SM01130	CYFUS_RS33905
CYFUS_RS33915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CYFUS_RS33935	SM00917	LeuA allosteric (dimerisation) domain
CYFUS_RS33950	SM01329	CYFUS_RS33950
CYFUS_RS33990	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS33995	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS34000	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS34005	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS34045	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS34075	SM00387	Histidine kinase-like ATPases
CYFUS_RS34075	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS34080	SM00028	Tetratricopeptide repeats
CYFUS_RS34085	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS34085	SM00448	cheY-homologous receiver domain
CYFUS_RS34090	SM00487	DEAD-like helicases superfamily
CYFUS_RS34090	SM00490	helicase superfamily c-terminal domain
CYFUS_RS34155	SM00603	CYFUS_RS34155
CYFUS_RS34255	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CYFUS_RS34280	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS34310	SM00448	cheY-homologous receiver domain
CYFUS_RS34320	SM00829	Enoylreductase
CYFUS_RS34360	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS34375	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS34400	SM01144	CYFUS_RS34400
CYFUS_RS34465	SM01022	CYFUS_RS34465
CYFUS_RS34480	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS34580	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS34670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS34670	SM00387	Histidine kinase-like ATPases
CYFUS_RS34675	SM00387	Histidine kinase-like ATPases
CYFUS_RS34675	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS34695	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS34760	SM01240	CYFUS_RS34760
CYFUS_RS34785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS34785	SM00387	Histidine kinase-like ATPases
CYFUS_RS34785	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS34805	SM00028	Tetratricopeptide repeats
CYFUS_RS34810	SM00448	cheY-homologous receiver domain
CYFUS_RS34815	SM00267	diguanylate cyclase
CYFUS_RS34815	SM00448	cheY-homologous receiver domain
CYFUS_RS34865	SM01400	CYFUS_RS34865
CYFUS_RS34895	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS34930	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS34930	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS34960	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS35020	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS35070	SM00244	prohibitin homologues
CYFUS_RS35075	SM00091	PAS domain
CYFUS_RS35075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS35075	SM00387	Histidine kinase-like ATPases
CYFUS_RS35075	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS35090	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS35095	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS35095	SM00448	cheY-homologous receiver domain
CYFUS_RS35100	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS35100	SM00419	helix_turn_helix, cAMP Regulatory protein
CYFUS_RS35105	SM00534	ATPase domain of DNA mismatch repair MUTS family
CYFUS_RS35150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS35150	SM00387	Histidine kinase-like ATPases
CYFUS_RS35180	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS35205	SM00822	CYFUS_RS35205
CYFUS_RS35240	SM01263	CYFUS_RS35240
CYFUS_RS35260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS35260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS35260	SM00387	Histidine kinase-like ATPases
CYFUS_RS35260	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS35315	SM01060	CYFUS_RS35315
CYFUS_RS35340	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS35340	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS35340	SM00091	PAS domain
CYFUS_RS35340	SM00387	Histidine kinase-like ATPases
CYFUS_RS35340	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS35340	SM00448	cheY-homologous receiver domain
CYFUS_RS35375	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS35390	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS35445	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS35450	SM00448	cheY-homologous receiver domain
CYFUS_RS35455	SM00260	Two component signalling adaptor domain
CYFUS_RS35455	SM00387	Histidine kinase-like ATPases
CYFUS_RS35455	SM00448	cheY-homologous receiver domain
CYFUS_RS35460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS35460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS35465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS35475	SM00260	Two component signalling adaptor domain
CYFUS_RS35485	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS35485	SM00448	cheY-homologous receiver domain
CYFUS_RS35530	SM00028	Tetratricopeptide repeats
CYFUS_RS35550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS35550	SM00387	Histidine kinase-like ATPases
CYFUS_RS35550	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS35570	SM00487	DEAD-like helicases superfamily
CYFUS_RS35570	SM00490	helicase superfamily c-terminal domain
CYFUS_RS35630	SM00020	Trypsin-like serine protease
CYFUS_RS35650	SM00448	cheY-homologous receiver domain
CYFUS_RS35665	SM00567	E-Z type HEAT repeats
CYFUS_RS35695	SM00870	CYFUS_RS35695
CYFUS_RS35700	SM00240	Forkhead associated domain
CYFUS_RS35700	SM00267	diguanylate cyclase
CYFUS_RS35705	SM00267	diguanylate cyclase
CYFUS_RS35710	SM00567	E-Z type HEAT repeats
CYFUS_RS35725	SM00400	zinc finger
CYFUS_RS35725	SM00493	CYFUS_RS35725
CYFUS_RS35780	SM00829	Enoylreductase
CYFUS_RS35820	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS35895	SM00357	Cold shock protein domain
CYFUS_RS35905	SM00448	cheY-homologous receiver domain
CYFUS_RS35905	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS35910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS35910	SM00387	Histidine kinase-like ATPases
CYFUS_RS35910	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS35925	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36050	SM00855	Phosphoglycerate mutase family
CYFUS_RS36055	SM01219	CYFUS_RS36055
CYFUS_RS36060	SM00267	diguanylate cyclase
CYFUS_RS36060	SM00448	cheY-homologous receiver domain
CYFUS_RS36085	SM00957	SecA DEAD-like domain
CYFUS_RS36085	SM00958	SecA preprotein cross-linking domain
CYFUS_RS36105	SM00331	Sigma factor PP2C-like phosphatases
CYFUS_RS36105	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CYFUS_RS36110	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36115	SM00487	DEAD-like helicases superfamily
CYFUS_RS36115	SM00490	helicase superfamily c-terminal domain
CYFUS_RS36135	SM01060	CYFUS_RS36135
CYFUS_RS36145	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS36185	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36195	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36200	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36200	SM00448	cheY-homologous receiver domain
CYFUS_RS36205	SM00387	Histidine kinase-like ATPases
CYFUS_RS36205	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS36205	SM00448	cheY-homologous receiver domain
CYFUS_RS36210	SM00267	diguanylate cyclase
CYFUS_RS36235	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CYFUS_RS36285	SM00487	DEAD-like helicases superfamily
CYFUS_RS36285	SM00490	helicase superfamily c-terminal domain
CYFUS_RS36350	SM01133	CYFUS_RS36350
CYFUS_RS36375	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS36375	SM00387	Histidine kinase-like ATPases
CYFUS_RS36375	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS36380	SM00612	CYFUS_RS36380
CYFUS_RS36390	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS36400	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS36400	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS36400	SM00387	Histidine kinase-like ATPases
CYFUS_RS36430	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS36430	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS36430	SM00387	Histidine kinase-like ATPases
CYFUS_RS36435	SM00829	Enoylreductase
CYFUS_RS36455	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS36460	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CYFUS_RS36475	SM00857	Resolvase, N terminal domain
CYFUS_RS36510	SM00829	Enoylreductase
CYFUS_RS36570	SM00487	DEAD-like helicases superfamily
CYFUS_RS36570	SM00490	helicase superfamily c-terminal domain
CYFUS_RS36630	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36650	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS36650	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYFUS_RS36700	SM00240	Forkhead associated domain
CYFUS_RS36715	SM00450	Rhodanese Homology Domain
CYFUS_RS36720	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS36725	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36745	SM01260	CYFUS_RS36745
CYFUS_RS36750	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS36775	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS36775	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS36775	SM00091	PAS domain
CYFUS_RS36775	SM00387	Histidine kinase-like ATPases
CYFUS_RS36775	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS36775	SM00448	cheY-homologous receiver domain
CYFUS_RS36860	SM01144	CYFUS_RS36860
CYFUS_RS36890	SM00448	cheY-homologous receiver domain
CYFUS_RS36910	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36910	SM00464	Found in ATP-dependent protease La (LON)
CYFUS_RS36920	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS36920	SM00994	ClpX C4-type zinc finger
CYFUS_RS36920	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS36985	SM00646	CYFUS_RS36985
CYFUS_RS36995	SM00240	Forkhead associated domain
CYFUS_RS37055	SM00028	Tetratricopeptide repeats
CYFUS_RS37095	SM00822	CYFUS_RS37095
CYFUS_RS37100	SM00478	endonuclease III
CYFUS_RS37100	SM00525	CYFUS_RS37100
CYFUS_RS37160	SM00881	CoA binding domain
CYFUS_RS37205	SM00563	Phosphate acyltransferases
CYFUS_RS37230	SM00829	Enoylreductase
CYFUS_RS37235	SM00882	Coenzyme A transferase
CYFUS_RS37240	SM00882	Coenzyme A transferase
CYFUS_RS37250	SM00387	Histidine kinase-like ATPases
CYFUS_RS37250	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS37250	SM00448	cheY-homologous receiver domain
CYFUS_RS37270	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS37275	SM00448	cheY-homologous receiver domain
CYFUS_RS37280	SM00091	PAS domain
CYFUS_RS37280	SM00387	Histidine kinase-like ATPases
CYFUS_RS37280	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS37280	SM00448	cheY-homologous receiver domain
CYFUS_RS37305	SM00822	CYFUS_RS37305
CYFUS_RS37325	SM00823	Phosphopantetheine attachment site
CYFUS_RS37410	SM00387	Histidine kinase-like ATPases
CYFUS_RS37410	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS37435	SM00448	cheY-homologous receiver domain
CYFUS_RS37435	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS37440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS37440	SM00387	Histidine kinase-like ATPases
CYFUS_RS37440	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS37475	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CYFUS_RS37490	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS37495	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS37500	SM00387	Histidine kinase-like ATPases
CYFUS_RS37500	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS37500	SM00448	cheY-homologous receiver domain
CYFUS_RS37505	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS37505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS37505	SM00387	Histidine kinase-like ATPases
CYFUS_RS37505	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS37505	SM00448	cheY-homologous receiver domain
CYFUS_RS37510	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS37525	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS37540	SM00631	CYFUS_RS37540
CYFUS_RS37560	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS37585	SM00205	Thaumatin family
CYFUS_RS37585	SM00458	Ricin-type beta-trefoil
CYFUS_RS37630	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS37630	SM00448	cheY-homologous receiver domain
CYFUS_RS37635	SM00387	Histidine kinase-like ATPases
CYFUS_RS37660	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS37755	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CYFUS_RS37785	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS37805	SM00829	Enoylreductase
CYFUS_RS37855	SM00028	Tetratricopeptide repeats
CYFUS_RS37885	SM00448	cheY-homologous receiver domain
CYFUS_RS37890	SM00448	cheY-homologous receiver domain
CYFUS_RS37895	SM00073	Histidine Phosphotransfer domain
CYFUS_RS37895	SM00260	Two component signalling adaptor domain
CYFUS_RS37895	SM00387	Histidine kinase-like ATPases
CYFUS_RS37895	SM00448	cheY-homologous receiver domain
CYFUS_RS37900	SM00260	Two component signalling adaptor domain
CYFUS_RS37905	SM00028	Tetratricopeptide repeats
CYFUS_RS37905	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS37910	SM00260	Two component signalling adaptor domain
CYFUS_RS37980	SM00822	CYFUS_RS37980
CYFUS_RS37995	SM01269	CYFUS_RS37995
CYFUS_RS38005	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS38005	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS38005	SM00387	Histidine kinase-like ATPases
CYFUS_RS38005	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS38095	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS38130	SM00060	Fibronectin type 3 domain
CYFUS_RS38130	SM00637	CYFUS_RS38130
CYFUS_RS38135	SM00060	Fibronectin type 3 domain
CYFUS_RS38135	SM01067	Cellulose binding domain
CYFUS_RS38140	SM00637	CYFUS_RS38140
CYFUS_RS38150	SM00354	helix_turn _helix lactose operon repressor
CYFUS_RS38195	SM00710	Parallel beta-helix repeats
CYFUS_RS38280	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS38305	SM00612	CYFUS_RS38305
CYFUS_RS38310	SM00823	Phosphopantetheine attachment site
CYFUS_RS38310	SM00824	Thioesterase
CYFUS_RS38315	SM00823	Phosphopantetheine attachment site
CYFUS_RS38315	SM00825	Beta-ketoacyl synthase
CYFUS_RS38315	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS38320	SM00823	Phosphopantetheine attachment site
CYFUS_RS38375	SM00897	FIST N domain
CYFUS_RS38375	SM01204	CYFUS_RS38375
CYFUS_RS38395	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS38395	SM00387	Histidine kinase-like ATPases
CYFUS_RS38410	SM00028	Tetratricopeptide repeats
CYFUS_RS38410	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS38450	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CYFUS_RS38460	SM00354	helix_turn _helix lactose operon repressor
CYFUS_RS38465	SM00060	Fibronectin type 3 domain
CYFUS_RS38530	SM00746	metallochaperone-like domain
CYFUS_RS38545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS38545	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS38545	SM00387	Histidine kinase-like ATPases
CYFUS_RS38575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS38575	SM00387	Histidine kinase-like ATPases
CYFUS_RS38600	SM00458	Ricin-type beta-trefoil
CYFUS_RS38600	SM00656	CYFUS_RS38600
CYFUS_RS38645	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS38650	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS38655	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS38685	SM00752	Horizontally Transferred TransMembrane Domain
CYFUS_RS38710	SM00448	cheY-homologous receiver domain
CYFUS_RS38710	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS38715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS38715	SM00387	Histidine kinase-like ATPases
CYFUS_RS38715	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS38720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS38765	SM00028	Tetratricopeptide repeats
CYFUS_RS38795	SM00179	Calcium-binding EGF-like domain
CYFUS_RS38795	SM00181	Epidermal growth factor-like domain.
CYFUS_RS38825	SM00248	ankyrin repeats
CYFUS_RS38880	SM00642	Alpha-amylase domain
CYFUS_RS38890	SM00387	Histidine kinase-like ATPases
CYFUS_RS38895	SM00448	cheY-homologous receiver domain
CYFUS_RS38895	SM00850	LytTr DNA-binding domain
CYFUS_RS38930	SM00612	CYFUS_RS38930
CYFUS_RS39045	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS39070	SM00998	Adenylosuccinate lyase C-terminus
CYFUS_RS39080	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS39100	SM00316	Ribosomal protein S1-like RNA-binding domain
CYFUS_RS39100	SM00322	K homology RNA-binding domain
CYFUS_RS39105	SM01387	CYFUS_RS39105
CYFUS_RS39140	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYFUS_RS39140	SM00316	Ribosomal protein S1-like RNA-binding domain
CYFUS_RS39140	SM00322	K homology RNA-binding domain
CYFUS_RS39165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS39165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS39215	SM00650	Ribosomal RNA adenine dimethylases
CYFUS_RS39225	SM00028	Tetratricopeptide repeats
CYFUS_RS39225	SM00448	cheY-homologous receiver domain
CYFUS_RS39230	SM00028	Tetratricopeptide repeats
CYFUS_RS39230	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS39245	SM00331	Sigma factor PP2C-like phosphatases
CYFUS_RS39245	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CYFUS_RS39260	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS39270	SM00028	Tetratricopeptide repeats
CYFUS_RS39290	SM00028	Tetratricopeptide repeats
CYFUS_RS39310	SM00612	CYFUS_RS39310
CYFUS_RS39345	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS39450	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS39555	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS39565	SM00028	Tetratricopeptide repeats
CYFUS_RS39565	SM00240	Forkhead associated domain
CYFUS_RS39570	SM00448	cheY-homologous receiver domain
CYFUS_RS39570	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS39585	SM00878	Biotin carboxylase C-terminal domain
CYFUS_RS39595	SM00864	Tubulin/FtsZ family, GTPase domain
CYFUS_RS39595	SM00865	Tubulin/FtsZ family, C-terminal domain
CYFUS_RS39600	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS39600	SM00091	PAS domain
CYFUS_RS39600	SM00387	Histidine kinase-like ATPases
CYFUS_RS39600	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS39600	SM00448	cheY-homologous receiver domain
CYFUS_RS39605	SM00842	Cell division protein FtsA
CYFUS_RS39615	SM01209	CYFUS_RS39615
CYFUS_RS39660	SM00740	CYFUS_RS39660
CYFUS_RS39695	SM01058	CarD-like/TRCF domain
CYFUS_RS39720	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS39730	SM01230	CYFUS_RS39730
CYFUS_RS39755	SM00357	Cold shock protein domain
CYFUS_RS39755	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS39755	SM00959	Rho termination factor, N-terminal domain
CYFUS_RS39760	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYFUS_RS39760	SM00292	breast cancer carboxy-terminal domain
CYFUS_RS39760	SM00532	Ligase N family
CYFUS_RS39785	SM00411	bacterial (prokaryotic) histone like domain
CYFUS_RS39850	SM00448	cheY-homologous receiver domain
CYFUS_RS39895	SM00823	Phosphopantetheine attachment site
CYFUS_RS39900	SM00823	Phosphopantetheine attachment site
CYFUS_RS39910	SM00823	Phosphopantetheine attachment site
CYFUS_RS39910	SM00825	Beta-ketoacyl synthase
CYFUS_RS39910	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CYFUS_RS39920	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CYFUS_RS39930	SM00244	prohibitin homologues
CYFUS_RS39935	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS39980	SM00028	Tetratricopeptide repeats
CYFUS_RS39985	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS39990	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS40000	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS40020	SM00641	Glycosyl hydrolases family 25
CYFUS_RS40025	SM00563	Phosphate acyltransferases
CYFUS_RS40125	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40205	SM00448	cheY-homologous receiver domain
CYFUS_RS40215	SM00257	Lysin motif
CYFUS_RS40220	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40240	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40285	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CYFUS_RS40290	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40325	SM01133	CYFUS_RS40325
CYFUS_RS40330	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS40335	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS40375	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40375	SM00962	SRP54-type protein, GTPase domain
CYFUS_RS40375	SM00963	SRP54-type protein, helical bundle domain
CYFUS_RS40465	SM01060	CYFUS_RS40465
CYFUS_RS40470	SM00248	ankyrin repeats
CYFUS_RS40490	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS40490	SM00245	tail specific protease
CYFUS_RS40515	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40590	SM00563	Phosphate acyltransferases
CYFUS_RS40610	SM00028	Tetratricopeptide repeats
CYFUS_RS40615	SM00878	Biotin carboxylase C-terminal domain
CYFUS_RS40625	SM00841	Elongation factor P, C-terminal
CYFUS_RS40625	SM01185	CYFUS_RS40625
CYFUS_RS40640	SM00965	Secretin and TonB N terminus short domain
CYFUS_RS40660	SM00842	Cell division protein FtsA
CYFUS_RS40680	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40690	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40690	SM00448	cheY-homologous receiver domain
CYFUS_RS40695	SM00091	PAS domain
CYFUS_RS40695	SM00387	Histidine kinase-like ATPases
CYFUS_RS40695	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS40710	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS40715	SM00904	Riboflavin kinase
CYFUS_RS40725	SM00267	diguanylate cyclase
CYFUS_RS40725	SM00448	cheY-homologous receiver domain
CYFUS_RS40750	SM00479	CYFUS_RS40750
CYFUS_RS40750	SM00491	CYFUS_RS40750
CYFUS_RS40770	SM00567	E-Z type HEAT repeats
CYFUS_RS40775	SM00567	E-Z type HEAT repeats
CYFUS_RS40780	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CYFUS_RS40810	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS40810	SM00245	tail specific protease
CYFUS_RS40845	SM00458	Ricin-type beta-trefoil
CYFUS_RS40850	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS40915	SM00028	Tetratricopeptide repeats
CYFUS_RS40925	SM00732	Likely ribonuclease with RNase H fold.
CYFUS_RS40935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS40935	SM00387	Histidine kinase-like ATPases
CYFUS_RS40935	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS40945	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS40945	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS40945	SM00091	PAS domain
CYFUS_RS40945	SM00387	Histidine kinase-like ATPases
CYFUS_RS40945	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS40945	SM00448	cheY-homologous receiver domain
CYFUS_RS40950	SM00763	PrkA AAA domain
CYFUS_RS40990	SM00060	Fibronectin type 3 domain
CYFUS_RS40990	SM00634	Bacterial Ig-like domain (group 1)
CYFUS_RS41000	SM00481	DNA polymerase alpha chain like domain
CYFUS_RS41030	SM00028	Tetratricopeptide repeats
CYFUS_RS41035	SM00612	CYFUS_RS41035
CYFUS_RS41050	SM00073	Histidine Phosphotransfer domain
CYFUS_RS41105	SM00387	Histidine kinase-like ATPases
CYFUS_RS41185	SM01150	CYFUS_RS41185
CYFUS_RS41220	SM00825	Beta-ketoacyl synthase
CYFUS_RS41230	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS41245	SM00458	Ricin-type beta-trefoil
CYFUS_RS41260	SM00487	DEAD-like helicases superfamily
CYFUS_RS41260	SM00490	helicase superfamily c-terminal domain
CYFUS_RS41265	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS41270	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CYFUS_RS41300	SM00758	CYFUS_RS41300
CYFUS_RS41325	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS41330	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS41370	SM00257	Lysin motif
CYFUS_RS41425	SM00710	Parallel beta-helix repeats
CYFUS_RS41450	SM00060	Fibronectin type 3 domain
CYFUS_RS41480	SM00867	YceI-like domain 
CYFUS_RS41485	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS41485	SM00989	CYFUS_RS41485
CYFUS_RS41490	SM01160	CYFUS_RS41490
CYFUS_RS41520	SM00448	cheY-homologous receiver domain
CYFUS_RS41540	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS41540	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS41540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS41540	SM00387	Histidine kinase-like ATPases
CYFUS_RS41540	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS41590	SM00230	Calpain-like thiol protease family.
CYFUS_RS41610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS41610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS41675	SM00822	CYFUS_RS41675
CYFUS_RS41685	SM00363	S4 RNA-binding domain
CYFUS_RS41700	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS41700	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS41700	SM00091	PAS domain
CYFUS_RS41700	SM00387	Histidine kinase-like ATPases
CYFUS_RS41700	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS41715	SM00893	Electron transfer flavoprotein domain
CYFUS_RS41720	SM00893	Electron transfer flavoprotein domain
CYFUS_RS41735	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS41745	SM00028	Tetratricopeptide repeats
CYFUS_RS41760	SM01130	CYFUS_RS41760
CYFUS_RS41780	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CYFUS_RS41780	SM01232	CYFUS_RS41780
CYFUS_RS41790	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS41955	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS41960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS41975	SM00460	Transglutaminase/protease-like homologues
CYFUS_RS42030	SM00829	Enoylreductase
CYFUS_RS42065	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS42070	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS42085	SM00458	Ricin-type beta-trefoil
CYFUS_RS42115	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS42120	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS42140	SM00028	Tetratricopeptide repeats
CYFUS_RS42145	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS42150	SM00240	Forkhead associated domain
CYFUS_RS42150	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS42180	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS42245	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS42265	SM00341	Helicase and RNase D C-terminal
CYFUS_RS42265	SM00474	3'-5' exonuclease
CYFUS_RS42290	SM00642	Alpha-amylase domain
CYFUS_RS42295	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS42295	SM00387	Histidine kinase-like ATPases
CYFUS_RS42295	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS42340	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS42390	SM01236	CYFUS_RS42390
CYFUS_RS42400	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS42475	SM00458	Ricin-type beta-trefoil
CYFUS_RS42575	SM01360	CYFUS_RS42575
CYFUS_RS42590	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CYFUS_RS42615	SM00155	Phospholipase D. Active site motifs.
CYFUS_RS42640	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS42660	SM00448	cheY-homologous receiver domain
CYFUS_RS42670	SM00091	PAS domain
CYFUS_RS42670	SM00387	Histidine kinase-like ATPases
CYFUS_RS42670	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS42690	SM00932	Scaffold protein Nfu/NifU N terminal
CYFUS_RS42710	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS42710	SM01086	C-terminal, D2-small domain, of ClpB protein
CYFUS_RS42715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS42715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS42720	SM00448	cheY-homologous receiver domain
CYFUS_RS42725	SM00073	Histidine Phosphotransfer domain
CYFUS_RS42725	SM00260	Two component signalling adaptor domain
CYFUS_RS42725	SM00387	Histidine kinase-like ATPases
CYFUS_RS42725	SM00448	cheY-homologous receiver domain
CYFUS_RS42730	SM00260	Two component signalling adaptor domain
CYFUS_RS42735	SM00138	Methyltransferase, chemotaxis proteins 
CYFUS_RS42740	SM00260	Two component signalling adaptor domain
CYFUS_RS42740	SM00448	cheY-homologous receiver domain
CYFUS_RS42745	SM00448	cheY-homologous receiver domain
CYFUS_RS42755	SM00861	Transketolase, pyrimidine binding domain
CYFUS_RS42765	SM00357	Cold shock protein domain
CYFUS_RS42780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS42805	SM00448	cheY-homologous receiver domain
CYFUS_RS42820	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS42835	SM00448	cheY-homologous receiver domain
CYFUS_RS42925	SM00855	Phosphoglycerate mutase family
CYFUS_RS42960	SM00752	Horizontally Transferred TransMembrane Domain
CYFUS_RS43000	SM00822	CYFUS_RS43000
CYFUS_RS43005	SM00507	HNH nucleases
CYFUS_RS43085	SM00487	DEAD-like helicases superfamily
CYFUS_RS43085	SM00490	helicase superfamily c-terminal domain
CYFUS_RS43095	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS43100	SM00448	cheY-homologous receiver domain
CYFUS_RS43105	SM00923	MbtH-like protein
CYFUS_RS43160	SM00028	Tetratricopeptide repeats
CYFUS_RS43175	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS43195	SM00495	Chitin-binding domain type 3
CYFUS_RS43195	SM00636	CYFUS_RS43195
CYFUS_RS43200	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS43220	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS43220	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS43220	SM00387	Histidine kinase-like ATPases
CYFUS_RS43265	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS43280	SM00860	SMI1 / KNR4 family
CYFUS_RS43285	SM00860	SMI1 / KNR4 family
CYFUS_RS43305	SM00248	ankyrin repeats
CYFUS_RS43355	SM00642	Alpha-amylase domain
CYFUS_RS43365	SM00448	cheY-homologous receiver domain
CYFUS_RS43370	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS43370	SM00091	PAS domain
CYFUS_RS43370	SM00387	Histidine kinase-like ATPases
CYFUS_RS43370	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS43530	SM00448	cheY-homologous receiver domain
CYFUS_RS43540	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS43540	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CYFUS_RS43590	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS43595	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS43630	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CYFUS_RS43655	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS43670	SM00093	SERine  Proteinase INhibitors
CYFUS_RS43690	SM00257	Lysin motif
CYFUS_RS43730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS43730	SM00387	Histidine kinase-like ATPases
CYFUS_RS43820	SM00656	CYFUS_RS43820
CYFUS_RS43840	SM00354	helix_turn _helix lactose operon repressor
CYFUS_RS43855	SM00637	CYFUS_RS43855
CYFUS_RS43860	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS43865	SM00486	DNA polymerase type-B family
CYFUS_RS43870	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS43905	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS43940	SM01321	CYFUS_RS43940
CYFUS_RS43965	SM00448	cheY-homologous receiver domain
CYFUS_RS43965	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS43970	SM00387	Histidine kinase-like ATPases
CYFUS_RS43970	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS44000	SM00612	CYFUS_RS44000
CYFUS_RS44000	SM00635	Bacterial Ig-like domain 2
CYFUS_RS44005	SM00135	Low-density lipoprotein-receptor YWTD domain
CYFUS_RS44015	SM00421	helix_turn_helix, Lux Regulon
CYFUS_RS44015	SM00448	cheY-homologous receiver domain
CYFUS_RS44020	SM00387	Histidine kinase-like ATPases
CYFUS_RS44020	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS44040	SM00028	Tetratricopeptide repeats
CYFUS_RS44040	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS44055	SM00829	Enoylreductase
CYFUS_RS44090	SM00487	DEAD-like helicases superfamily
CYFUS_RS44090	SM00490	helicase superfamily c-terminal domain
CYFUS_RS44105	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS44105	SM00387	Histidine kinase-like ATPases
CYFUS_RS44105	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS44120	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS44125	SM00448	cheY-homologous receiver domain
CYFUS_RS44130	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS44145	SM00829	Enoylreductase
CYFUS_RS44150	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CYFUS_RS44195	SM00028	Tetratricopeptide repeats
CYFUS_RS44225	SM00387	Histidine kinase-like ATPases
CYFUS_RS44225	SM00448	cheY-homologous receiver domain
CYFUS_RS44235	SM01329	CYFUS_RS44235
CYFUS_RS44245	SM00756	CYFUS_RS44245
CYFUS_RS44260	SM00905	Dihydroneopterin aldolase
CYFUS_RS44270	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CYFUS_RS44270	SM01232	CYFUS_RS44270
CYFUS_RS44340	SM00448	cheY-homologous receiver domain
CYFUS_RS44340	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS44345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS44345	SM00387	Histidine kinase-like ATPases
CYFUS_RS44345	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS44355	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS44370	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS44370	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS44370	SM00387	Histidine kinase-like ATPases
CYFUS_RS44370	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS44430	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS44555	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS44625	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS44625	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS44685	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CYFUS_RS44695	SM00478	endonuclease III
CYFUS_RS44700	SM00155	Phospholipase D. Active site motifs.
CYFUS_RS44705	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS44755	SM00710	Parallel beta-helix repeats
CYFUS_RS44810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS44810	SM00387	Histidine kinase-like ATPases
CYFUS_RS44835	SM00606	Cellulose Binding Domain Type IV
CYFUS_RS44835	SM00710	Parallel beta-helix repeats
CYFUS_RS44850	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS44930	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS44935	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS44945	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS44950	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS44960	SM00986	Uracil DNA glycosylase superfamily
CYFUS_RS44960	SM00987	UreE urease accessory protein, C-terminal domain 
CYFUS_RS44985	SM01236	CYFUS_RS44985
CYFUS_RS45000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS45055	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS45060	SM00028	Tetratricopeptide repeats
CYFUS_RS45060	SM00567	E-Z type HEAT repeats
CYFUS_RS45065	SM00448	cheY-homologous receiver domain
CYFUS_RS45070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS45070	SM00387	Histidine kinase-like ATPases
CYFUS_RS45070	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS45075	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS45075	SM00448	cheY-homologous receiver domain
CYFUS_RS45085	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS45110	SM00244	prohibitin homologues
CYFUS_RS45135	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS45135	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS45135	SM00387	Histidine kinase-like ATPases
CYFUS_RS45145	SM00612	CYFUS_RS45145
CYFUS_RS45165	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS45165	SM00478	endonuclease III
CYFUS_RS45165	SM01009	AlkA N-terminal domain
CYFUS_RS45205	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS45215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS45215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS45245	SM00235	Zinc-dependent metalloprotease
CYFUS_RS45245	SM00458	Ricin-type beta-trefoil
CYFUS_RS45250	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS45250	SM00091	PAS domain
CYFUS_RS45250	SM00387	Histidine kinase-like ATPases
CYFUS_RS45250	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS45265	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS45265	SM00924	MgtE intracellular N domain
CYFUS_RS45290	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS45410	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS45420	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS45430	SM00729	Elongator protein 3, MiaB family, Radical SAM
CYFUS_RS45445	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CYFUS_RS45450	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS45530	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS45530	SM00091	PAS domain
CYFUS_RS45530	SM00387	Histidine kinase-like ATPases
CYFUS_RS45530	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS45535	SM00387	Histidine kinase-like ATPases
CYFUS_RS45535	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS45535	SM00448	cheY-homologous receiver domain
CYFUS_RS45555	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CYFUS_RS45560	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS45630	SM00640	Glycosyl hydrolases family 32
CYFUS_RS45660	SM00458	Ricin-type beta-trefoil
CYFUS_RS45665	SM00060	Fibronectin type 3 domain
CYFUS_RS45675	SM00612	CYFUS_RS45675
CYFUS_RS45690	SM01005	Alanine racemase, C-terminal domain
CYFUS_RS45770	SM00028	Tetratricopeptide repeats
CYFUS_RS45785	SM00458	Ricin-type beta-trefoil
CYFUS_RS45795	SM00487	DEAD-like helicases superfamily
CYFUS_RS45795	SM00490	helicase superfamily c-terminal domain
CYFUS_RS45805	SM00636	CYFUS_RS45805
CYFUS_RS45810	SM00458	Ricin-type beta-trefoil
CYFUS_RS45820	SM00448	cheY-homologous receiver domain
CYFUS_RS45860	SM00028	Tetratricopeptide repeats
CYFUS_RS45940	SM00060	Fibronectin type 3 domain
CYFUS_RS45940	SM01067	Cellulose binding domain
CYFUS_RS45945	SM00656	CYFUS_RS45945
CYFUS_RS45970	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CYFUS_RS46010	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS46040	SM00448	cheY-homologous receiver domain
CYFUS_RS46045	SM00387	Histidine kinase-like ATPases
CYFUS_RS46150	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS46150	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS46150	SM00240	Forkhead associated domain
CYFUS_RS46180	SM00240	Forkhead associated domain
CYFUS_RS46190	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CYFUS_RS46230	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS46235	SM00448	cheY-homologous receiver domain
CYFUS_RS46235	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS46240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS46240	SM00387	Histidine kinase-like ATPases
CYFUS_RS46240	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS46340	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS46360	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS46375	SM00829	Enoylreductase
CYFUS_RS46390	SM00788	Adenylosuccinate synthetase
CYFUS_RS46405	SM00984	UDP binding domain
CYFUS_RS46525	SM00347	helix_turn_helix multiple antibiotic resistance protein
CYFUS_RS46550	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS46555	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS46565	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS46580	SM00060	Fibronectin type 3 domain
CYFUS_RS46610	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS46635	SM00448	cheY-homologous receiver domain
CYFUS_RS46660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS46715	SM00946	Prolyl-tRNA synthetase, C-terminal
CYFUS_RS46740	SM00564	beta-propeller repeat
CYFUS_RS46750	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS46755	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS46810	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CYFUS_RS46820	SM01001	AIR carboxylase
CYFUS_RS46830	SM00642	Alpha-amylase domain
CYFUS_RS46865	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS46870	SM00642	Alpha-amylase domain
CYFUS_RS46885	SM00073	Histidine Phosphotransfer domain
CYFUS_RS46885	SM00260	Two component signalling adaptor domain
CYFUS_RS46885	SM00387	Histidine kinase-like ATPases
CYFUS_RS46885	SM01231	CYFUS_RS46885
CYFUS_RS46890	SM00448	cheY-homologous receiver domain
CYFUS_RS46895	SM00260	Two component signalling adaptor domain
CYFUS_RS46900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS46900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS46915	SM00387	Histidine kinase-like ATPases
CYFUS_RS46915	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS46940	SM00487	DEAD-like helicases superfamily
CYFUS_RS46940	SM00491	CYFUS_RS46940
CYFUS_RS47005	SM00248	ankyrin repeats
CYFUS_RS47010	SM01067	Cellulose binding domain
CYFUS_RS47045	SM00095	Transthyretin
CYFUS_RS47060	SM00448	cheY-homologous receiver domain
CYFUS_RS47065	SM00387	Histidine kinase-like ATPases
CYFUS_RS47095	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CYFUS_RS47125	SM00460	Transglutaminase/protease-like homologues
CYFUS_RS47150	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS47225	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS47225	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS47225	SM00091	PAS domain
CYFUS_RS47225	SM00387	Histidine kinase-like ATPases
CYFUS_RS47225	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS47225	SM00448	cheY-homologous receiver domain
CYFUS_RS47235	SM00829	Enoylreductase
CYFUS_RS47240	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS47240	SM00419	helix_turn_helix, cAMP Regulatory protein
CYFUS_RS47245	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS47315	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS47320	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS47320	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS47320	SM00387	Histidine kinase-like ATPases
CYFUS_RS47335	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS47335	SM00091	PAS domain
CYFUS_RS47335	SM00387	Histidine kinase-like ATPases
CYFUS_RS47335	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS47345	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS47350	SM00240	Forkhead associated domain
CYFUS_RS47430	SM00822	CYFUS_RS47430
CYFUS_RS47550	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS47615	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS47625	SM00769	Water Stress and Hypersensitive response
CYFUS_RS47645	SM00267	diguanylate cyclase
CYFUS_RS47650	SM00240	Forkhead associated domain
CYFUS_RS47650	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS47655	SM00240	Forkhead associated domain
CYFUS_RS47685	SM00464	Found in ATP-dependent protease La (LON)
CYFUS_RS47695	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS47695	SM00387	Histidine kinase-like ATPases
CYFUS_RS47695	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS47695	SM00448	cheY-homologous receiver domain
CYFUS_RS47725	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS47725	SM00091	PAS domain
CYFUS_RS47725	SM00387	Histidine kinase-like ATPases
CYFUS_RS47725	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS47730	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS47730	SM00091	PAS domain
CYFUS_RS47730	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS47735	SM00710	Parallel beta-helix repeats
CYFUS_RS47770	SM00028	Tetratricopeptide repeats
CYFUS_RS47775	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS47775	SM00448	cheY-homologous receiver domain
CYFUS_RS47785	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS47800	SM00635	Bacterial Ig-like domain 2
CYFUS_RS47835	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS47890	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS47940	SM00387	Histidine kinase-like ATPases
CYFUS_RS47940	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS47950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CYFUS_RS47975	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS47980	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS48070	SM00060	Fibronectin type 3 domain
CYFUS_RS48115	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS48120	SM00855	Phosphoglycerate mutase family
CYFUS_RS48140	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS48150	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
CYFUS_RS48150	SM00710	Parallel beta-helix repeats
CYFUS_RS48170	SM00090	RIO-like kinase
CYFUS_RS48180	SM00387	Histidine kinase-like ATPases
CYFUS_RS48180	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS48190	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS48195	SM00448	cheY-homologous receiver domain
CYFUS_RS48200	SM00260	Two component signalling adaptor domain
CYFUS_RS48210	SM00260	Two component signalling adaptor domain
CYFUS_RS48215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS48215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CYFUS_RS48220	SM00073	Histidine Phosphotransfer domain
CYFUS_RS48220	SM00260	Two component signalling adaptor domain
CYFUS_RS48220	SM00387	Histidine kinase-like ATPases
CYFUS_RS48220	SM00448	cheY-homologous receiver domain
CYFUS_RS48220	SM01231	CYFUS_RS48220
CYFUS_RS48225	SM00448	cheY-homologous receiver domain
CYFUS_RS48230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS48230	SM00387	Histidine kinase-like ATPases
CYFUS_RS48230	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS48260	SM00248	ankyrin repeats
CYFUS_RS48300	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS48300	SM00387	Histidine kinase-like ATPases
CYFUS_RS48300	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS48300	SM00448	cheY-homologous receiver domain
CYFUS_RS48305	SM00448	cheY-homologous receiver domain
CYFUS_RS48310	SM00387	Histidine kinase-like ATPases
CYFUS_RS48425	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS48425	SM00091	PAS domain
CYFUS_RS48425	SM00387	Histidine kinase-like ATPases
CYFUS_RS48425	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS48435	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS48455	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CYFUS_RS48455	SM00475	5'-3' exonuclease
CYFUS_RS48500	SM00100	Cyclic nucleotide-monophosphate binding domain
CYFUS_RS48500	SM00419	helix_turn_helix, cAMP Regulatory protein
CYFUS_RS48530	SM00028	Tetratricopeptide repeats
CYFUS_RS48530	SM00271	DnaJ molecular chaperone homology domain
CYFUS_RS48565	SM00155	Phospholipase D. Active site motifs.
CYFUS_RS48590	SM00487	DEAD-like helicases superfamily
CYFUS_RS48590	SM00490	helicase superfamily c-terminal domain
CYFUS_RS48660	SM00327	von Willebrand factor (vWF) type A domain
CYFUS_RS48690	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS48755	SM00387	Histidine kinase-like ATPases
CYFUS_RS48755	SM00433	TopoisomeraseII
CYFUS_RS48770	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS48770	SM00387	Histidine kinase-like ATPases
CYFUS_RS48770	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS48775	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS48785	SM00838	Elongation factor G C-terminus
CYFUS_RS48785	SM00889	Elongation factor G, domain IV
CYFUS_RS48810	SM01350	CYFUS_RS48810
CYFUS_RS48840	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS48875	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS48920	SM00642	Alpha-amylase domain
CYFUS_RS48930	SM01230	CYFUS_RS48930
CYFUS_RS48935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS48935	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS48960	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS48965	SM00387	Histidine kinase-like ATPases
CYFUS_RS48965	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS48980	SM00861	Transketolase, pyrimidine binding domain
CYFUS_RS48985	SM00387	Histidine kinase-like ATPases
CYFUS_RS48985	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS48985	SM00448	cheY-homologous receiver domain
CYFUS_RS49020	SM00797	Allophanate hydrolase subunit 2
CYFUS_RS49025	SM00796	Allophanate hydrolase subunit 1
CYFUS_RS49045	SM00849	Metallo-beta-lactamase superfamily
CYFUS_RS49080	SM00257	Lysin motif
CYFUS_RS49105	SM01007	Class II Aldolase and Adducin N-terminal domain
CYFUS_RS49125	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS49135	SM00257	Lysin motif
CYFUS_RS49145	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS49145	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS49145	SM00091	PAS domain
CYFUS_RS49145	SM00387	Histidine kinase-like ATPases
CYFUS_RS49145	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS49145	SM00448	cheY-homologous receiver domain
CYFUS_RS49170	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS49170	SM00448	cheY-homologous receiver domain
CYFUS_RS49175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS49175	SM00387	Histidine kinase-like ATPases
CYFUS_RS49175	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS49250	SM00155	Phospholipase D. Active site motifs.
CYFUS_RS49255	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CYFUS_RS49275	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS49285	SM00248	ankyrin repeats
CYFUS_RS49315	SM00822	CYFUS_RS49315
CYFUS_RS49325	SM00852	Probable molybdopterin binding domain
CYFUS_RS49345	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS49360	SM00448	cheY-homologous receiver domain
CYFUS_RS49360	SM00862	Transcriptional regulatory protein, C terminal
CYFUS_RS49365	SM00387	Histidine kinase-like ATPases
CYFUS_RS49365	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS49370	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS49390	SM00387	Histidine kinase-like ATPases
CYFUS_RS49390	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS49460	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CYFUS_RS49460	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS49460	SM01080	CYFUS_RS49460
CYFUS_RS49470	SM00670	Large family of predicted nucleotide-binding domains
CYFUS_RS49545	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS49585	SM00829	Enoylreductase
CYFUS_RS49590	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS49680	SM00612	CYFUS_RS49680
CYFUS_RS49720	SM00342	helix_turn_helix, arabinose operon control protein
CYFUS_RS49775	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CYFUS_RS49775	SM00091	PAS domain
CYFUS_RS49775	SM00387	Histidine kinase-like ATPases
CYFUS_RS49775	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS49775	SM00448	cheY-homologous receiver domain
CYFUS_RS49780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CYFUS_RS49825	SM00530	Helix-turn-helix XRE-family like proteins 
CYFUS_RS49835	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CYFUS_RS49990	SM00248	ankyrin repeats
CYFUS_RS50015	SM00382	ATPases associated with a variety of cellular activities
CYFUS_RS50020	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CYFUS_RS50020	SM00387	Histidine kinase-like ATPases
CYFUS_RS50020	SM00388	His Kinase A (phosphoacceptor) domain
CYFUS_RS50060	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS50065	SM00116	Domain in cystathionine beta-synthase and other proteins.
CYFUS_RS50095	SM00470	ParB-like nuclease domain
CYFUS_RS50110	SM00860	SMI1 / KNR4 family
CYFUS_RS50120	SM01228	CYFUS_RS50120
CYFUS_RS50145	SM00220	Serine/Threonine protein kinases, catalytic domain
CYFUS_RS50200	SM01234	CYFUS_RS50200
