locus-tag class description DCF50_RS00005 PF00308 Bacterial dnaA protein DCF50_RS00005 PF11638 DnaA N-terminal domain DCF50_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DCF50_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DCF50_RS00010 PF02767 DNA polymerase III beta subunit, central domain DCF50_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DCF50_RS00015 PF13476 AAA domain DCF50_RS00025 PF00204 DNA gyrase B DCF50_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus DCF50_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS00025 PF01751 Toprim domain DCF50_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DCF50_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DCF50_RS00035 PF01680 SOR/SNZ family DCF50_RS00040 PF01174 SNO glutamine amidotransferase family DCF50_RS00045 PF02403 Seryl-tRNA synthetase N-terminal domain DCF50_RS00045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DCF50_RS00060 PF14437 MafB19-like deaminase DCF50_RS00105 PF00069 Protein kinase domain DCF50_RS00105 PF03793 PASTA domain DCF50_RS00115 PF13614 AAA domain DCF50_RS00120 PF02195 ParB-like nuclease domain DCF50_RS00120 PF17762 HTH domain found in ParB protein DCF50_RS00165 PF12671 Putative amidase domain DCF50_RS00180 PF01131 DNA topoisomerase DCF50_RS00180 PF01751 Toprim domain DCF50_RS00225 PF03432 Relaxase/Mobilisation nuclease domain DCF50_RS00245 PF13361 UvrD-like helicase C-terminal domain DCF50_RS00245 PF00580 UvrD/REP helicase N-terminal domain DCF50_RS00255 PF18273 Type III R-M EcoP15I C-terminal domain DCF50_RS00255 PF01555 DNA methylase DCF50_RS00260 PF08774 VRR-NUC domain DCF50_RS00260 PF04851 Type III restriction enzyme, res subunit DCF50_RS00305 PF01323 DSBA-like thioredoxin domain DCF50_RS00315 PF01638 HxlR-like helix-turn-helix DCF50_RS00325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DCF50_RS00325 PF07685 CobB/CobQ-like glutamine amidotransferase domain DCF50_RS00340 PF00665 Integrase core domain DCF50_RS00340 PF13333 Integrase core domain DCF50_RS00340 PF13276 HTH-like domain DCF50_RS00365 PF02796 Helix-turn-helix domain of resolvase DCF50_RS00365 PF00239 Resolvase, N terminal domain DCF50_RS00370 PF02254 TrkA-N domain DCF50_RS00370 PF02080 TrkA-C domain DCF50_RS00375 PF02386 Cation transport protein DCF50_RS00380 PF03600 Citrate transporter DCF50_RS00385 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DCF50_RS00395 PF00583 Acetyltransferase (GNAT) family DCF50_RS00400 PF04055 Radical SAM superfamily DCF50_RS00400 PF12544 Lysine-2,3-aminomutase DCF50_RS00425 PF04055 Radical SAM superfamily DCF50_RS00425 PF13186 Iron-sulfur cluster-binding domain DCF50_RS00455 PF00665 Integrase core domain DCF50_RS00455 PF13276 HTH-like domain DCF50_RS00455 PF13333 Integrase core domain DCF50_RS00505 PF00437 Type II/IV secretion system protein DCF50_RS00520 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS00520 PF08448 PAS fold DCF50_RS00520 PF08447 PAS fold DCF50_RS00520 PF00563 EAL domain DCF50_RS00610 PF13173 AAA domain DCF50_RS00610 PF13635 Domain of unknown function (DUF4143) DCF50_RS00640 PF17762 HTH domain found in ParB protein DCF50_RS00640 PF02195 ParB-like nuclease domain DCF50_RS00645 PF13614 AAA domain DCF50_RS00690 PF13614 AAA domain DCF50_RS00695 PF17762 HTH domain found in ParB protein DCF50_RS00695 PF02195 ParB-like nuclease domain DCF50_RS00735 PF13443 Cro/C1-type HTH DNA-binding domain DCF50_RS00740 PF13936 Helix-turn-helix domain DCF50_RS00760 PF03432 Relaxase/Mobilisation nuclease domain DCF50_RS00825 PF13426 PAS domain DCF50_RS00825 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS00825 PF00563 EAL domain DCF50_RS00840 PF00437 Type II/IV secretion system protein DCF50_RS00920 PF01022 Bacterial regulatory protein, arsR family DCF50_RS00925 PF02625 XdhC and CoxI family DCF50_RS00925 PF13478 XdhC Rossmann domain DCF50_RS00945 PF01022 Bacterial regulatory protein, arsR family DCF50_RS00950 PF04055 Radical SAM superfamily DCF50_RS00950 PF06463 Molybdenum Cofactor Synthesis C DCF50_RS00965 PF01022 Bacterial regulatory protein, arsR family DCF50_RS00975 PF04055 Radical SAM superfamily DCF50_RS00975 PF06463 Molybdenum Cofactor Synthesis C DCF50_RS00980 PF01022 Bacterial regulatory protein, arsR family DCF50_RS00985 PF01758 Sodium Bile acid symporter family DCF50_RS00995 PF01451 Low molecular weight phosphotyrosine protein phosphatase DCF50_RS01000 PF13478 XdhC Rossmann domain DCF50_RS01000 PF02625 XdhC and CoxI family DCF50_RS01005 PF06953 Arsenical resistance operon trans-acting repressor ArsD DCF50_RS01010 PF02374 Anion-transporting ATPase DCF50_RS01020 PF01022 Bacterial regulatory protein, arsR family DCF50_RS01040 PF04542 Sigma-70 region 2 DCF50_RS01040 PF08281 Sigma-70, region 4 DCF50_RS01050 PF01925 Sulfite exporter TauE/SafE DCF50_RS01055 PF00005 ABC transporter DCF50_RS01055 PF08402 TOBE domain DCF50_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component DCF50_RS01070 PF12727 PBP superfamily domain DCF50_RS01070 PF12728 Helix-turn-helix domain DCF50_RS01080 PF01022 Bacterial regulatory protein, arsR family DCF50_RS01085 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCF50_RS01085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DCF50_RS01100 PF01597 Glycine cleavage H-protein DCF50_RS01120 PF03099 Biotin/lipoate A/B protein ligase family DCF50_RS01120 PF10437 Bacterial lipoate protein ligase C-terminus DCF50_RS01125 PF00085 Thioredoxin DCF50_RS01135 PF00266 Aminotransferase class-V DCF50_RS01145 PF01022 Bacterial regulatory protein, arsR family DCF50_RS01170 PF03099 Biotin/lipoate A/B protein ligase family DCF50_RS01170 PF10437 Bacterial lipoate protein ligase C-terminus DCF50_RS01185 PF07690 Major Facilitator Superfamily DCF50_RS01220 PF01434 Peptidase family M41 DCF50_RS01220 PF06480 FtsH Extracellular DCF50_RS01220 PF17862 AAA+ lid domain DCF50_RS01220 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS01235 PF17151 Periplasmic sensor domain DCF50_RS01235 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS01255 PF01381 Helix-turn-helix DCF50_RS01275 PF00909 Ammonium Transporter Family DCF50_RS01305 PF13533 Biotin-lipoyl like DCF50_RS01310 PF00005 ABC transporter DCF50_RS01315 PF00005 ABC transporter DCF50_RS01325 PF00440 Bacterial regulatory proteins, tetR family DCF50_RS01340 PF12169 DNA polymerase III subunits gamma and tau domain III DCF50_RS01345 PF02575 YbaB/EbfC DNA-binding family DCF50_RS01350 PF13662 Toprim domain DCF50_RS01350 PF02132 RecR protein DCF50_RS01360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DCF50_RS01360 PF10371 Domain of unknown function DCF50_RS01360 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DCF50_RS01360 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DCF50_RS01360 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DCF50_RS01365 PF01276 Orn/Lys/Arg decarboxylase, major domain DCF50_RS01365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DCF50_RS01375 PF04468 PSP1 C-terminal conserved region DCF50_RS01380 PF06156 Initiation control protein YabA DCF50_RS01385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCF50_RS01390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DCF50_RS01390 PF18277 AbrB C-terminal domain DCF50_RS01395 PF09334 tRNA synthetases class I (M) DCF50_RS01395 PF08264 Anticodon-binding domain of tRNA DCF50_RS01395 PF01588 Putative tRNA binding domain DCF50_RS01400 PF01026 TatD related DNase DCF50_RS01410 PF02310 B12 binding domain DCF50_RS01410 PF02607 B12 binding domain DCF50_RS01425 PF00111 2Fe-2S iron-sulfur cluster binding domain DCF50_RS01425 PF00175 Oxidoreductase NAD-binding domain DCF50_RS01425 PF00970 Oxidoreductase FAD-binding domain DCF50_RS01430 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain DCF50_RS01430 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit DCF50_RS01435 PF00809 Pterin binding enzyme DCF50_RS01440 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit DCF50_RS01440 PF04060 Putative Fe-S cluster DCF50_RS01445 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit DCF50_RS01455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DCF50_RS01460 PF03063 Prismane/CO dehydrogenase family DCF50_RS01470 PF00809 Pterin binding enzyme DCF50_RS01475 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DCF50_RS01475 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DCF50_RS01480 PF04961 Formiminotransferase-cyclodeaminase DCF50_RS01485 PF01268 Formate--tetrahydrofolate ligase DCF50_RS01490 PF01226 Formate/nitrite transporter DCF50_RS01505 PF00392 Bacterial regulatory proteins, gntR family DCF50_RS01505 PF07702 UTRA domain DCF50_RS01510 PF14489 QueF-like protein DCF50_RS01520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DCF50_RS01520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DCF50_RS01545 PF00037 4Fe-4S binding domain DCF50_RS01545 PF12798 4Fe-4S binding domain DCF50_RS01565 PF13331 Domain of unknown function (DUF4093) DCF50_RS01565 PF13662 Toprim domain DCF50_RS01570 PF00398 Ribosomal RNA adenine dimethylase DCF50_RS01575 PF05582 YabG peptidase U57 DCF50_RS01580 PF03575 Peptidase family S51 DCF50_RS01585 PF08245 Mur ligase middle domain DCF50_RS01585 PF08443 RimK-like ATP-grasp domain DCF50_RS01585 PF02875 Mur ligase family, glutamate ligase domain DCF50_RS01590 PF00288 GHMP kinases N terminal domain DCF50_RS01590 PF08544 GHMP kinases C terminal DCF50_RS01595 PF07729 FCD domain DCF50_RS01595 PF00392 Bacterial regulatory proteins, gntR family DCF50_RS01600 PF00156 Phosphoribosyl transferase domain DCF50_RS01600 PF09182 Bacterial purine repressor, N-terminal DCF50_RS01605 PF04026 SpoVG DCF50_RS01610 PF00132 Bacterial transferase hexapeptide (six repeats) DCF50_RS01610 PF12804 MobA-like NTP transferase domain DCF50_RS01615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DCF50_RS01615 PF14572 Phosphoribosyl synthetase-associated domain DCF50_RS01625 PF01195 Peptidyl-tRNA hydrolase DCF50_RS01630 PF00271 Helicase conserved C-terminal domain DCF50_RS01630 PF02559 CarD-like/TRCF domain DCF50_RS01630 PF03461 TRCF domain DCF50_RS01630 PF17757 UvrB interaction domain DCF50_RS01630 PF00270 DEAD/DEAH box helicase DCF50_RS01640 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DCF50_RS01640 PF15714 Stage V sporulation protein T C-terminal, transcription factor DCF50_RS01645 PF03819 MazG nucleotide pyrophosphohydrolase domain DCF50_RS01650 PF00216 Bacterial DNA-binding protein DCF50_RS01655 PF01479 S4 domain DCF50_RS01685 PF07228 Stage II sporulation protein E (SpoIIE) DCF50_RS01690 PF11734 TilS substrate C-terminal domain DCF50_RS01690 PF01171 PP-loop family DCF50_RS01695 PF01434 Peptidase family M41 DCF50_RS01695 PF06480 FtsH Extracellular DCF50_RS01695 PF17862 AAA+ lid domain DCF50_RS01695 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS01700 PF00334 Nucleoside diphosphate kinase DCF50_RS01715 PF00809 Pterin binding enzyme DCF50_RS01720 PF02152 Dihydroneopterin aldolase DCF50_RS01725 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DCF50_RS01735 PF02569 Pantoate-beta-alanine ligase DCF50_RS01740 PF02261 Aspartate decarboxylase DCF50_RS01745 PF02445 Quinolinate synthetase A protein DCF50_RS01750 PF02910 Fumarate reductase flavoprotein C-term DCF50_RS01750 PF00890 FAD binding domain DCF50_RS01755 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DCF50_RS01755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DCF50_RS01760 PF03309 Type III pantothenate kinase DCF50_RS01765 PF01207 Dihydrouridine synthase (Dus) DCF50_RS01775 PF01272 Transcription elongation factor, GreA/GreB, C-term DCF50_RS01775 PF03449 Transcription elongation factor, N-terminal DCF50_RS01780 PF00152 tRNA synthetases class II (D, K and N) DCF50_RS01780 PF01336 OB-fold nucleic acid binding domain DCF50_RS01800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DCF50_RS01800 PF00672 HAMP domain DCF50_RS01800 PF02743 Cache domain DCF50_RS01835 PF00437 Type II/IV secretion system protein DCF50_RS01840 PF00072 Response regulator receiver domain DCF50_RS01840 PF00196 Bacterial regulatory proteins, luxR family DCF50_RS01865 PF09397 Ftsk gamma domain DCF50_RS01865 PF17854 FtsK alpha domain DCF50_RS01865 PF01580 FtsK/SpoIIIE family DCF50_RS01870 PF00581 Rhodanese-like domain DCF50_RS01875 PF13464 Domain of unknown function (DUF4115) DCF50_RS01880 PF04055 Radical SAM superfamily DCF50_RS01880 PF08497 Radical SAM N-terminal DCF50_RS01880 PF11842 Domain of unknown function (DUF3362) DCF50_RS01885 PF04055 Radical SAM superfamily DCF50_RS01885 PF18693 TRAM domain DCF50_RS01885 PF00919 Uncharacterized protein family UPF0004 DCF50_RS01890 PF01066 CDP-alcohol phosphatidyltransferase DCF50_RS01895 PF00994 Probable molybdopterin binding domain DCF50_RS01895 PF18146 Damage-inducible protein CinA KH domain DCF50_RS01895 PF02464 Competence-damaged protein DCF50_RS01900 PF00154 recA bacterial DNA recombination protein DCF50_RS01905 PF02631 RecX family DCF50_RS01910 PF12072 Domain of unknown function (DUF3552) DCF50_RS01910 PF00013 KH domain DCF50_RS01910 PF01966 HD domain DCF50_RS01920 PF13277 YmdB-like protein DCF50_RS01925 PF04232 Stage V sporulation protein S (SpoVS) DCF50_RS01930 PF01244 Membrane dipeptidase (Peptidase family M19) DCF50_RS01935 PF02811 PHP domain DCF50_RS01940 PF00155 Aminotransferase class I and II DCF50_RS01955 PF01895 PhoU domain DCF50_RS01970 PF00583 Acetyltransferase (GNAT) family DCF50_RS01970 PF14698 Argininosuccinate lyase C-terminal DCF50_RS01970 PF00206 Lyase DCF50_RS01975 PF00075 RNase H DCF50_RS01980 PF00549 CoA-ligase DCF50_RS01980 PF08442 ATP-grasp domain DCF50_RS01990 PF02629 CoA binding domain DCF50_RS01990 PF00549 CoA-ligase DCF50_RS01995 PF03328 HpcH/HpaI aldolase/citrate lyase family DCF50_RS02000 PF00390 Malic enzyme, N-terminal domain DCF50_RS02000 PF03949 Malic enzyme, NAD binding domain DCF50_RS02005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS02010 PF00072 Response regulator receiver domain DCF50_RS02010 PF01966 HD domain DCF50_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS02015 PF13493 Domain of unknown function (DUF4118) DCF50_RS02015 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS02015 PF13492 GAF domain DCF50_RS02015 PF02702 Osmosensitive K+ channel His kinase sensor domain DCF50_RS02020 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS02020 PF00072 Response regulator receiver domain DCF50_RS02025 PF13520 Amino acid permease DCF50_RS02045 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DCF50_RS02055 PF08148 DSHCT (NUC185) domain DCF50_RS02055 PF00270 DEAD/DEAH box helicase DCF50_RS02055 PF00271 Helicase conserved C-terminal domain DCF50_RS02065 PF00005 ABC transporter DCF50_RS02070 PF09084 NMT1/THI5 like DCF50_RS02075 PF00528 Binding-protein-dependent transport system inner membrane component DCF50_RS02080 PF01910 Thiamine-binding protein DCF50_RS02085 PF01209 ubiE/COQ5 methyltransferase family DCF50_RS02090 PF00571 CBS domain DCF50_RS02095 PF02607 B12 binding domain DCF50_RS02095 PF02310 B12 binding domain DCF50_RS02105 PF09186 Domain of unknown function (DUF1949) DCF50_RS02105 PF01205 Uncharacterized protein family UPF0029 DCF50_RS02125 PF01757 Acyltransferase family DCF50_RS02155 PF00730 HhH-GPD superfamily base excision DNA repair protein DCF50_RS02155 PF00633 Helix-hairpin-helix motif DCF50_RS02165 PF00291 Pyridoxal-phosphate dependent enzyme DCF50_RS02170 PF13193 AMP-binding enzyme C-terminal domain DCF50_RS02170 PF16177 Acetyl-coenzyme A synthetase N-terminus DCF50_RS02170 PF00501 AMP-binding enzyme DCF50_RS02185 PF08439 Oligopeptidase F DCF50_RS02185 PF01432 Peptidase family M3 DCF50_RS02190 PF10609 NUBPL iron-transfer P-loop NTPase DCF50_RS02195 PF05221 S-adenosyl-L-homocysteine hydrolase DCF50_RS02195 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DCF50_RS02200 PF00583 Acetyltransferase (GNAT) family DCF50_RS02210 PF04225 Opacity-associated protein A LysM-like domain DCF50_RS02210 PF01551 Peptidase family M23 DCF50_RS02215 PF08459 UvrC Helix-hairpin-helix N-terminal DCF50_RS02215 PF02151 UvrB/uvrC motif DCF50_RS02215 PF01541 GIY-YIG catalytic domain DCF50_RS02245 PF02525 Flavodoxin-like fold DCF50_RS02250 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS02250 PF13185 GAF domain DCF50_RS02255 PF16193 AAA C-terminal domain DCF50_RS02255 PF12002 MgsA AAA+ ATPase C terminal DCF50_RS02255 PF05496 Holliday junction DNA helicase RuvB P-loop domain DCF50_RS02260 PF02082 Transcriptional regulator DCF50_RS02265 PF00266 Aminotransferase class-V DCF50_RS02270 PF01592 NifU-like N terminal domain DCF50_RS02290 PF01594 AI-2E family transporter DCF50_RS02295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DCF50_RS02295 PF01411 tRNA synthetases class II (A) DCF50_RS02295 PF02272 DHHA1 domain DCF50_RS02300 PF06135 IreB regulatory phosphoprotein DCF50_RS02310 PF03652 Holliday junction resolvase DCF50_RS02315 PF06949 Protein of unknown function (DUF1292) DCF50_RS02320 PF02618 YceG-like family DCF50_RS02325 PF01136 Peptidase family U32 DCF50_RS02325 PF16325 Peptidase family U32 C-terminal domain DCF50_RS02350 PF04542 Sigma-70 region 2 DCF50_RS02350 PF04545 Sigma-70, region 4 DCF50_RS02360 PF08501 Shikimate dehydrogenase substrate binding domain DCF50_RS02360 PF01488 Shikimate / quinate 5-dehydrogenase DCF50_RS02360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DCF50_RS02370 PF01202 Shikimate kinase DCF50_RS02375 PF01761 3-dehydroquinate synthase DCF50_RS02380 PF08334 Type II secretion system (T2SS), protein G DCF50_RS02380 PF07963 Prokaryotic N-terminal methylation motif DCF50_RS02400 PF00437 Type II/IV secretion system protein DCF50_RS02400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DCF50_RS02410 PF07963 Prokaryotic N-terminal methylation motif DCF50_RS02410 PF08334 Type II secretion system (T2SS), protein G DCF50_RS02425 PF01979 Amidohydrolase family DCF50_RS02425 PF13382 Adenine deaminase C-terminal domain DCF50_RS02445 PF01220 Dehydroquinase class II DCF50_RS02450 PF01321 Creatinase/Prolidase N-terminal domain DCF50_RS02450 PF00557 Metallopeptidase family M24 DCF50_RS02455 PF01132 Elongation factor P (EF-P) OB domain DCF50_RS02455 PF08207 Elongation factor P (EF-P) KOW-like domain DCF50_RS02455 PF09285 Elongation factor P, C-terminal DCF50_RS02460 PF00704 Glycosyl hydrolases family 18 DCF50_RS02460 PF01476 LysM domain DCF50_RS02460 PF00704 Glycosyl hydrolases family 18 DCF50_RS02460 PF01476 LysM domain DCF50_RS02475 PF06686 Stage III sporulation protein AC/AD protein family DCF50_RS02480 PF06686 Stage III sporulation protein AC/AD protein family DCF50_RS02485 PF09546 Stage III sporulation protein AE (spore_III_AE) DCF50_RS02505 PF03780 Asp23 family, cell envelope-related function DCF50_RS02515 PF01029 NusB family DCF50_RS02520 PF00814 Glycoprotease family DCF50_RS02525 PF00175 Oxidoreductase NAD-binding domain DCF50_RS02525 PF00970 Oxidoreductase FAD-binding domain DCF50_RS02525 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DCF50_RS02530 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCF50_RS02530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DCF50_RS02530 PF13247 4Fe-4S dicluster domain DCF50_RS02545 PF13742 OB-fold nucleic acid binding domain DCF50_RS02545 PF02601 Exonuclease VII, large subunit DCF50_RS02550 PF02609 Exonuclease VII small subunit DCF50_RS02555 PF00348 Polyprenyl synthetase DCF50_RS02570 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DCF50_RS02570 PF02779 Transketolase, pyrimidine binding domain DCF50_RS02570 PF02780 Transketolase, C-terminal domain DCF50_RS02575 PF01728 FtsJ-like methyltransferase DCF50_RS02575 PF01479 S4 domain DCF50_RS02580 PF01513 ATP-NAD kinase DCF50_RS02585 PF06962 Putative rRNA methylase DCF50_RS02590 PF01316 Arginine repressor, DNA binding domain DCF50_RS02590 PF02863 Arginine repressor, C-terminal domain DCF50_RS02595 PF02463 RecF/RecN/SMC N terminal domain DCF50_RS02605 PF17820 PDZ domain DCF50_RS02605 PF05580 SpoIVB peptidase S55 DCF50_RS02615 PF00293 NUDIX domain DCF50_RS02620 PF01944 Stage II sporulation protein M DCF50_RS02625 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS02625 PF00589 Phage integrase family DCF50_RS02630 PF01676 Metalloenzyme superfamily DCF50_RS02635 PF01048 Phosphorylase superfamily DCF50_RS02640 PF02885 Glycosyl transferase family, helical bundle domain DCF50_RS02640 PF00591 Glycosyl transferase family, a/b domain DCF50_RS02640 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DCF50_RS02655 PF07943 Penicillin-binding protein 5, C-terminal domain DCF50_RS02655 PF00768 D-alanyl-D-alanine carboxypeptidase DCF50_RS02660 PF04545 Sigma-70, region 4 DCF50_RS02660 PF04542 Sigma-70 region 2 DCF50_RS02660 PF04539 Sigma-70 region 3 DCF50_RS02665 PF13581 Histidine kinase-like ATPase domain DCF50_RS02670 PF01740 STAS domain DCF50_RS02675 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DCF50_RS02680 PF07451 Stage V sporulation protein AD (SpoVAD) DCF50_RS02685 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DCF50_RS02690 PF03323 Bacillus/Clostridium GerA spore germination protein DCF50_RS02725 PF00072 Response regulator receiver domain DCF50_RS02725 PF00196 Bacterial regulatory proteins, luxR family DCF50_RS02740 PF12704 MacB-like periplasmic core domain DCF50_RS02740 PF00005 ABC transporter DCF50_RS02740 PF02687 FtsX-like permease family DCF50_RS02760 PF08239 Bacterial SH3 domain DCF50_RS02760 PF00246 Zinc carboxypeptidase DCF50_RS02790 PF03600 Citrate transporter DCF50_RS02800 PF00571 CBS domain DCF50_RS02800 PF01368 DHH family DCF50_RS02800 PF12627 Probable RNA and SrmB- binding site of polymerase A DCF50_RS02800 PF02272 DHHA1 domain DCF50_RS02800 PF01743 Poly A polymerase head domain DCF50_RS02805 PF00579 tRNA synthetases class I (W and Y) DCF50_RS02810 PF02616 Segregation and condensation protein ScpA DCF50_RS02815 PF04079 Segregation and condensation complex subunit ScpB DCF50_RS02820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DCF50_RS02820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DCF50_RS02825 PF03631 Virulence factor BrkB DCF50_RS02835 PF04239 Protein of unknown function (DUF421) DCF50_RS02850 PF13537 Glutamine amidotransferase domain DCF50_RS02850 PF00733 Asparagine synthase DCF50_RS02855 PF04715 Anthranilate synthase component I, N terminal region DCF50_RS02855 PF00425 chorismate binding enzyme DCF50_RS02855 PF00117 Glutamine amidotransferase class-I DCF50_RS02860 PF00682 HMGL-like DCF50_RS02860 PF07836 DmpG-like communication domain DCF50_RS02865 PF00291 Pyridoxal-phosphate dependent enzyme DCF50_RS02870 PF00290 Tryptophan synthase alpha chain DCF50_RS02875 PF00591 Glycosyl transferase family, a/b domain DCF50_RS02875 PF02885 Glycosyl transferase family, helical bundle domain DCF50_RS02880 PF00218 Indole-3-glycerol phosphate synthase DCF50_RS02885 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DCF50_RS02890 PF02096 60Kd inner membrane protein DCF50_RS02900 PF02698 DUF218 domain DCF50_RS02905 PF01522 Polysaccharide deacetylase DCF50_RS02910 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DCF50_RS02920 PF03747 ADP-ribosylglycohydrolase DCF50_RS02925 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DCF50_RS02925 PF00749 tRNA synthetases class I (E and Q), catalytic domain DCF50_RS02930 PF00269 Small, acid-soluble spore proteins, alpha/beta type DCF50_RS02935 PF00543 Nitrogen regulatory protein P-II DCF50_RS02940 PF07687 Peptidase dimerisation domain DCF50_RS02940 PF01546 Peptidase family M20/M25/M40 DCF50_RS02950 PF02417 Chromate transporter DCF50_RS02955 PF02417 Chromate transporter DCF50_RS02960 PF04542 Sigma-70 region 2 DCF50_RS02960 PF08281 Sigma-70, region 4 DCF50_RS02960 PF12680 SnoaL-like domain DCF50_RS02975 PF12838 4Fe-4S dicluster domain DCF50_RS02975 PF13486 Reductive dehalogenase subunit DCF50_RS02985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS02995 PF00781 Diacylglycerol kinase catalytic domain DCF50_RS03000 PF00226 DnaJ domain DCF50_RS03000 PF01556 DnaJ C terminal domain DCF50_RS03005 PF07724 AAA domain (Cdc48 subfamily) DCF50_RS03005 PF17871 AAA lid domain DCF50_RS03005 PF02861 Clp amino terminal domain, pathogenicity island component DCF50_RS03005 PF10431 C-terminal, D2-small domain, of ClpB protein DCF50_RS03005 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS03020 PF00885 6,7-dimethyl-8-ribityllumazine synthase DCF50_RS03025 PF00925 GTP cyclohydrolase II DCF50_RS03025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DCF50_RS03030 PF00677 Lumazine binding domain DCF50_RS03035 PF01872 RibD C-terminal domain DCF50_RS03035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DCF50_RS03050 PF00269 Small, acid-soluble spore proteins, alpha/beta type DCF50_RS03085 PF01022 Bacterial regulatory protein, arsR family DCF50_RS03090 PF03773 Predicted permease DCF50_RS03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS03100 PF05384 Sensor protein DegS DCF50_RS03100 PF07730 Histidine kinase DCF50_RS03105 PF00072 Response regulator receiver domain DCF50_RS03105 PF00196 Bacterial regulatory proteins, luxR family DCF50_RS03110 PF10996 Beta-Casp domain DCF50_RS03110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DCF50_RS03110 PF00753 Metallo-beta-lactamase superfamily DCF50_RS03120 PF07261 Replication initiation and membrane attachment DCF50_RS03125 PF01695 IstB-like ATP binding protein DCF50_RS03125 PF07319 Primosomal protein DnaI N-terminus DCF50_RS03140 PF09992 Phosphodiester glycosidase DCF50_RS03140 PF12708 Pectate lyase superfamily protein DCF50_RS03155 PF02915 Rubrerythrin DCF50_RS03160 PF00924 Mechanosensitive ion channel DCF50_RS03165 PF03699 Uncharacterised protein family (UPF0182) DCF50_RS03170 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCF50_RS03175 PF01476 LysM domain DCF50_RS03180 PF01694 Rhomboid family DCF50_RS03185 PF03717 Penicillin-binding Protein dimerisation domain DCF50_RS03185 PF00905 Penicillin binding protein transpeptidase domain DCF50_RS03185 PF03793 PASTA domain DCF50_RS03190 PF05343 M42 glutamyl aminopeptidase DCF50_RS03195 PF05343 M42 glutamyl aminopeptidase DCF50_RS03200 PF05343 M42 glutamyl aminopeptidase DCF50_RS03205 PF00731 AIR carboxylase DCF50_RS03220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DCF50_RS03220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DCF50_RS03225 PF00391 PEP-utilising enzyme, mobile domain DCF50_RS03225 PF02887 Pyruvate kinase, alpha/beta domain DCF50_RS03225 PF00224 Pyruvate kinase, barrel domain DCF50_RS03230 PF00455 DeoR C terminal sensor domain DCF50_RS03230 PF08220 DeoR-like helix-turn-helix domain DCF50_RS03235 PF10609 NUBPL iron-transfer P-loop NTPase DCF50_RS03240 PF01551 Peptidase family M23 DCF50_RS03245 PF02645 Uncharacterised protein, DegV family COG1307 DCF50_RS03250 PF00919 Uncharacterized protein family UPF0004 DCF50_RS03250 PF01938 TRAM domain DCF50_RS03250 PF04055 Radical SAM superfamily DCF50_RS03255 PF05192 MutS domain III DCF50_RS03255 PF05190 MutS family domain IV DCF50_RS03255 PF00488 MutS domain V DCF50_RS03255 PF01624 MutS domain I DCF50_RS03255 PF05188 MutS domain II DCF50_RS03265 PF00850 Histone deacetylase domain DCF50_RS03270 PF08676 MutL C terminal dimerisation domain DCF50_RS03270 PF01119 DNA mismatch repair protein, C-terminal domain DCF50_RS03275 PF04445 Putative SAM-dependent methyltransferase DCF50_RS03285 PF17209 Hfq protein DCF50_RS03290 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS03290 PF17866 AAA lid domain DCF50_RS03295 PF06838 Methionine gamma-lyase DCF50_RS03300 PF10502 Signal peptidase, peptidase S26 DCF50_RS03305 PF07478 D-ala D-ala ligase C-terminus DCF50_RS03305 PF01820 D-ala D-ala ligase N-terminus DCF50_RS03310 PF01726 LexA DNA binding domain DCF50_RS03310 PF00717 Peptidase S24-like DCF50_RS03345 PF02645 Uncharacterised protein, DegV family COG1307 DCF50_RS03355 PF02687 FtsX-like permease family DCF50_RS03355 PF12704 MacB-like periplasmic core domain DCF50_RS03355 PF00005 ABC transporter DCF50_RS03360 PF00005 ABC transporter DCF50_RS03370 PF01416 tRNA pseudouridine synthase DCF50_RS03375 PF00313 'Cold-shock' DNA-binding domain DCF50_RS03390 PF01645 Conserved region in glutamate synthase DCF50_RS03400 PF02007 Tetrahydromethanopterin S-methyltransferase MtrH subunit DCF50_RS03405 PF02277 Phosphoribosyltransferase DCF50_RS03420 PF01618 MotA/TolQ/ExbB proton channel family DCF50_RS03425 PF13677 Membrane MotB of proton-channel complex MotA/MotB DCF50_RS03425 PF00691 OmpA family DCF50_RS03430 PF00563 EAL domain DCF50_RS03430 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS03430 PF03707 Bacterial signalling protein N terminal repeat DCF50_RS03440 PF01131 DNA topoisomerase DCF50_RS03440 PF01751 Toprim domain DCF50_RS03445 PF01131 DNA topoisomerase DCF50_RS03445 PF01751 Toprim domain DCF50_RS03460 PF00072 Response regulator receiver domain DCF50_RS03460 PF01584 CheW-like domain DCF50_RS03465 PF00271 Helicase conserved C-terminal domain DCF50_RS03465 PF00270 DEAD/DEAH box helicase DCF50_RS03465 PF03880 DbpA RNA binding domain DCF50_RS03475 PF00563 EAL domain DCF50_RS03475 PF08668 HDOD domain DCF50_RS03480 PF13382 Adenine deaminase C-terminal domain DCF50_RS03480 PF01979 Amidohydrolase family DCF50_RS03485 PF13193 AMP-binding enzyme C-terminal domain DCF50_RS03485 PF00501 AMP-binding enzyme DCF50_RS03490 PF00501 AMP-binding enzyme DCF50_RS03490 PF14535 AMP-binding enzyme C-terminal domain DCF50_RS03510 PF13476 AAA domain DCF50_RS03515 PF00149 Calcineurin-like phosphoesterase DCF50_RS03515 PF12320 Type 5 capsule protein repressor C-terminal domain DCF50_RS03520 PF00571 CBS domain DCF50_RS03520 PF00478 IMP dehydrogenase / GMP reductase domain DCF50_RS03525 PF00291 Pyridoxal-phosphate dependent enzyme DCF50_RS03530 PF00005 ABC transporter DCF50_RS03530 PF00664 ABC transporter transmembrane region DCF50_RS03535 PF13180 PDZ domain DCF50_RS03550 PF00072 Response regulator receiver domain DCF50_RS03550 PF00196 Bacterial regulatory proteins, luxR family DCF50_RS03555 PF00672 HAMP domain DCF50_RS03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS03555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DCF50_RS03555 PF07730 Histidine kinase DCF50_RS03575 PF01906 Putative heavy-metal-binding DCF50_RS03580 PF00072 Response regulator receiver domain DCF50_RS03590 PF00795 Carbon-nitrogen hydrolase DCF50_RS03595 PF04371 Porphyromonas-type peptidyl-arginine deiminase DCF50_RS03600 PF13193 AMP-binding enzyme C-terminal domain DCF50_RS03600 PF00501 AMP-binding enzyme DCF50_RS03620 PF14815 NUDIX domain DCF50_RS03620 PF00730 HhH-GPD superfamily base excision DNA repair protein DCF50_RS03635 PF02872 5'-nucleotidase, C-terminal domain DCF50_RS03635 PF00746 LPXTG cell wall anchor motif DCF50_RS03635 PF00149 Calcineurin-like phosphoesterase DCF50_RS03635 PF00565 Staphylococcal nuclease homologue DCF50_RS03640 PF12146 Serine aminopeptidase, S33 DCF50_RS03645 PF00877 NlpC/P60 family DCF50_RS03650 PF00072 Response regulator receiver domain DCF50_RS03650 PF00672 HAMP domain DCF50_RS03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS03650 PF01627 Hpt domain DCF50_RS03650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DCF50_RS03650 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS03655 PF00072 Response regulator receiver domain DCF50_RS03670 PF17774 Putative RNA-binding domain in YlmH DCF50_RS03670 PF01479 S4 domain DCF50_RS03680 PF08239 Bacterial SH3 domain DCF50_RS03680 PF00246 Zinc carboxypeptidase DCF50_RS03690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS03710 PF12848 ABC transporter DCF50_RS03710 PF00005 ABC transporter DCF50_RS03715 PF16326 ABC transporter C-terminal domain DCF50_RS03715 PF00005 ABC transporter DCF50_RS03715 PF12848 ABC transporter DCF50_RS03720 PF12697 Alpha/beta hydrolase family DCF50_RS03735 PF00795 Carbon-nitrogen hydrolase DCF50_RS03740 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DCF50_RS03745 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DCF50_RS03745 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DCF50_RS03745 PF00374 Nickel-dependent hydrogenase DCF50_RS03750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DCF50_RS03750 PF00361 Proton-conducting membrane transporter DCF50_RS03765 PF00361 Proton-conducting membrane transporter DCF50_RS03770 PF00440 Bacterial regulatory proteins, tetR family DCF50_RS03775 PF05504 Spore germination B3/ GerAC like, C-terminal DCF50_RS03780 PF03323 Bacillus/Clostridium GerA spore germination protein DCF50_RS03790 PF05504 Spore germination B3/ GerAC like, C-terminal DCF50_RS03795 PF00155 Aminotransferase class I and II DCF50_RS03800 PF03167 Uracil DNA glycosylase superfamily DCF50_RS03805 PF17783 CvfB-like winged helix domain DCF50_RS03805 PF13509 S1 domain DCF50_RS03810 PF00484 Carbonic anhydrase DCF50_RS03820 PF00291 Pyridoxal-phosphate dependent enzyme DCF50_RS03825 PF01476 LysM domain DCF50_RS03825 PF08239 Bacterial SH3 domain DCF50_RS03825 PF00877 NlpC/P60 family DCF50_RS03840 PF00005 ABC transporter DCF50_RS03840 PF00664 ABC transporter transmembrane region DCF50_RS03865 PF07739 TipAS antibiotic-recognition domain DCF50_RS03865 PF13411 MerR HTH family regulatory protein DCF50_RS03870 PF02915 Rubrerythrin DCF50_RS03875 PF07690 Major Facilitator Superfamily DCF50_RS03890 PF01430 Hsp33 protein DCF50_RS03905 PF17932 Tetracyclin repressor-like, C-terminal domain DCF50_RS03905 PF00440 Bacterial regulatory proteins, tetR family DCF50_RS03925 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DCF50_RS03925 PF12557 Cob(I)alamin adenosyltransferase N terminal DCF50_RS03930 PF07685 CobB/CobQ-like glutamine amidotransferase domain DCF50_RS03930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DCF50_RS03940 PF00155 Aminotransferase class I and II DCF50_RS03945 PF03186 CobD/Cbib protein DCF50_RS03960 PF02654 Cobalamin-5-phosphate synthase DCF50_RS03970 PF07685 CobB/CobQ-like glutamine amidotransferase domain DCF50_RS03970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DCF50_RS03975 PF00005 ABC transporter DCF50_RS03980 PF01061 ABC-2 type transporter DCF50_RS03990 PF00005 ABC transporter DCF50_RS03990 PF12848 ABC transporter DCF50_RS03995 PF00027 Cyclic nucleotide-binding domain DCF50_RS03995 PF00520 Ion transport protein DCF50_RS04000 PF08486 Stage II sporulation protein DCF50_RS04000 PF04122 Putative cell wall binding repeat 2 DCF50_RS04005 PF13183 4Fe-4S dicluster domain DCF50_RS04005 PF02589 LUD domain DCF50_RS04005 PF11870 Domain of unknown function (DUF3390) DCF50_RS04025 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DCF50_RS04025 PF06165 Glycosyltransferase family 36 DCF50_RS04025 PF10091 Putative glucoamylase DCF50_RS04035 PF01580 FtsK/SpoIIIE family DCF50_RS04035 PF09397 Ftsk gamma domain DCF50_RS04035 PF17854 FtsK alpha domain DCF50_RS04040 PF02811 PHP domain DCF50_RS04085 PF00881 Nitroreductase family DCF50_RS04090 PF00884 Sulfatase DCF50_RS04095 PF02769 AIR synthase related protein, C-terminal domain DCF50_RS04095 PF00586 AIR synthase related protein, N-terminal domain DCF50_RS04100 PF01924 Hydrogenase formation hypA family DCF50_RS04105 PF01455 HupF/HypC family DCF50_RS04110 PF02492 CobW/HypB/UreG, nucleotide-binding domain DCF50_RS04115 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DCF50_RS04125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DCF50_RS04130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DCF50_RS04135 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DCF50_RS04140 PF00146 NADH dehydrogenase DCF50_RS04145 PF00361 Proton-conducting membrane transporter DCF50_RS04145 PF13244 Domain of unknown function (DUF4040) DCF50_RS04145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DCF50_RS04150 PF00155 Aminotransferase class I and II DCF50_RS04155 PF02687 FtsX-like permease family DCF50_RS04155 PF12704 MacB-like periplasmic core domain DCF50_RS04160 PF00005 ABC transporter DCF50_RS04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS04165 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS04165 PF00672 HAMP domain DCF50_RS04170 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS04170 PF00072 Response regulator receiver domain DCF50_RS04190 PF00106 short chain dehydrogenase DCF50_RS04200 PF13732 Domain of unknown function (DUF4162) DCF50_RS04200 PF00005 ABC transporter DCF50_RS04205 PF13396 Phospholipase_D-nuclease N-terminal DCF50_RS04210 PF01381 Helix-turn-helix DCF50_RS04215 PF00679 Elongation factor G C-terminus DCF50_RS04215 PF00009 Elongation factor Tu GTP binding domain DCF50_RS04215 PF03144 Elongation factor Tu domain 2 DCF50_RS04215 PF03764 Elongation factor G, domain IV DCF50_RS04215 PF14492 Elongation Factor G, domain II DCF50_RS04220 PF14667 Polysaccharide biosynthesis C-terminal domain DCF50_RS04220 PF01943 Polysaccharide biosynthesis protein DCF50_RS04230 PF01975 Survival protein SurE DCF50_RS04235 PF01227 GTP cyclohydrolase I DCF50_RS04240 PF00999 Sodium/hydrogen exchanger family DCF50_RS04245 PF02080 TrkA-C domain DCF50_RS04275 PF02548 Ketopantoate hydroxymethyltransferase DCF50_RS04290 PF00365 Phosphofructokinase DCF50_RS04295 PF11638 DnaA N-terminal domain DCF50_RS04295 PF08299 Bacterial dnaA protein helix-turn-helix DCF50_RS04295 PF00308 Bacterial dnaA protein DCF50_RS04300 PF03951 Glutamine synthetase, beta-Grasp domain DCF50_RS04300 PF00120 Glutamine synthetase, catalytic domain DCF50_RS04320 PF01522 Polysaccharide deacetylase DCF50_RS04325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DCF50_RS04325 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DCF50_RS04340 PF02223 Thymidylate kinase DCF50_RS04345 PF08769 Sporulation initiation factor Spo0A C terminal DCF50_RS04345 PF00072 Response regulator receiver domain DCF50_RS04365 PF00929 Exonuclease DCF50_RS04365 PF04851 Type III restriction enzyme, res subunit DCF50_RS04365 PF13307 Helicase C-terminal domain DCF50_RS04375 PF01312 FlhB HrpN YscU SpaS Family DCF50_RS04395 PF00085 Thioredoxin DCF50_RS04400 PF02583 Metal-sensitive transcriptional repressor DCF50_RS04405 PF00152 tRNA synthetases class II (D, K and N) DCF50_RS04405 PF02938 GAD domain DCF50_RS04405 PF01336 OB-fold nucleic acid binding domain DCF50_RS04410 PF03129 Anticodon binding domain DCF50_RS04410 PF13393 Histidyl-tRNA synthetase DCF50_RS04415 PF04055 Radical SAM superfamily DCF50_RS04420 PF00753 Metallo-beta-lactamase superfamily DCF50_RS04425 PF04607 Region found in RelA / SpoT proteins DCF50_RS04425 PF02824 TGS domain DCF50_RS04425 PF13291 ACT domain DCF50_RS04430 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DCF50_RS04430 PF17768 RecJ OB domain DCF50_RS04430 PF02272 DHHA1 domain DCF50_RS04430 PF01368 DHH family DCF50_RS04450 PF10369 Small subunit of acetolactate synthase DCF50_RS04455 PF00205 Thiamine pyrophosphate enzyme, central domain DCF50_RS04455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DCF50_RS04455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DCF50_RS04460 PF12706 Beta-lactamase superfamily domain DCF50_RS04465 PF02355 Protein export membrane protein DCF50_RS04465 PF07549 SecD/SecF GG Motif DCF50_RS04470 PF02355 Protein export membrane protein DCF50_RS04470 PF07549 SecD/SecF GG Motif DCF50_RS04475 PF02699 Preprotein translocase subunit DCF50_RS04480 PF01702 Queuine tRNA-ribosyltransferase DCF50_RS04485 PF02547 Queuosine biosynthesis protein DCF50_RS04490 PF08486 Stage II sporulation protein DCF50_RS04495 PF05491 RuvB C-terminal winged helix domain DCF50_RS04495 PF05496 Holliday junction DNA helicase RuvB P-loop domain DCF50_RS04495 PF17864 RuvB AAA lid domain DCF50_RS04500 PF01330 RuvA N terminal domain DCF50_RS04500 PF07499 RuvA, C-terminal domain DCF50_RS04505 PF02075 Crossover junction endodeoxyribonuclease RuvC DCF50_RS04510 PF01709 Transcriptional regulator DCF50_RS04515 PF02743 Cache domain DCF50_RS04515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DCF50_RS04515 PF00672 HAMP domain DCF50_RS04520 PF03323 Bacillus/Clostridium GerA spore germination protein DCF50_RS04550 PF12800 4Fe-4S binding domain DCF50_RS04550 PF13247 4Fe-4S dicluster domain DCF50_RS04555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DCF50_RS04555 PF01568 Molydopterin dinucleotide binding domain DCF50_RS04555 PF00384 Molybdopterin oxidoreductase DCF50_RS04560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DCF50_RS04560 PF00384 Molybdopterin oxidoreductase DCF50_RS04560 PF01568 Molydopterin dinucleotide binding domain DCF50_RS04565 PF17788 HypF Kae1-like domain DCF50_RS04565 PF00708 Acylphosphatase DCF50_RS04565 PF01300 Telomere recombination DCF50_RS04565 PF07503 HypF finger DCF50_RS04570 PF09084 NMT1/THI5 like DCF50_RS04575 PF00005 ABC transporter DCF50_RS04580 PF00528 Binding-protein-dependent transport system inner membrane component DCF50_RS04585 PF02256 Iron hydrogenase small subunit DCF50_RS04585 PF00037 4Fe-4S binding domain DCF50_RS04585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DCF50_RS04585 PF02906 Iron only hydrogenase large subunit, C-terminal domain DCF50_RS04590 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DCF50_RS04590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DCF50_RS04590 PF00037 4Fe-4S binding domain DCF50_RS04600 PF00171 Aldehyde dehydrogenase family DCF50_RS04605 PF00696 Amino acid kinase family DCF50_RS04605 PF01472 PUA domain DCF50_RS04610 PF03807 NADP oxidoreductase coenzyme F420-dependent DCF50_RS04610 PF14748 Pyrroline-5-carboxylate reductase dimerisation DCF50_RS04615 PF02673 Bacitracin resistance protein BacA DCF50_RS04635 PF03781 Sulfatase-modifying factor enzyme 1 DCF50_RS04650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS04685 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS04695 PF08331 Domain of unknown function (DUF1730) DCF50_RS04705 PF00180 Isocitrate/isopropylmalate dehydrogenase DCF50_RS04710 PF00694 Aconitase C-terminal domain DCF50_RS04715 PF00330 Aconitase family (aconitate hydratase) DCF50_RS04720 PF08502 LeuA allosteric (dimerisation) domain DCF50_RS04720 PF00682 HMGL-like DCF50_RS04725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DCF50_RS04725 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DCF50_RS04730 PF10369 Small subunit of acetolactate synthase DCF50_RS04735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DCF50_RS04735 PF00205 Thiamine pyrophosphate enzyme, central domain DCF50_RS04735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DCF50_RS04740 PF00920 Dehydratase family DCF50_RS04745 PF01063 Amino-transferase class IV DCF50_RS04750 PF00742 Homoserine dehydrogenase DCF50_RS04750 PF03447 Homoserine dehydrogenase, NAD binding domain DCF50_RS04750 PF01842 ACT domain DCF50_RS04755 PF08544 GHMP kinases C terminal DCF50_RS04755 PF00288 GHMP kinases N terminal domain DCF50_RS04765 PF01464 Transglycosylase SLT domain DCF50_RS04765 PF14718 Soluble lytic murein transglycosylase L domain DCF50_RS04770 PF01121 Dephospho-CoA kinase DCF50_RS04775 PF02659 Putative manganese efflux pump DCF50_RS04780 PF12848 ABC transporter DCF50_RS04780 PF00005 ABC transporter DCF50_RS04780 PF16326 ABC transporter C-terminal domain DCF50_RS04785 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DCF50_RS04785 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DCF50_RS04785 PF06827 Zinc finger found in FPG and IleRS DCF50_RS04790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DCF50_RS04790 PF00476 DNA polymerase family A DCF50_RS04790 PF01367 5'-3' exonuclease, C-terminal SAM fold DCF50_RS04800 PF13193 AMP-binding enzyme C-terminal domain DCF50_RS04800 PF00501 AMP-binding enzyme DCF50_RS04820 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DCF50_RS04820 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DCF50_RS04820 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DCF50_RS04840 PF00269 Small, acid-soluble spore proteins, alpha/beta type DCF50_RS04855 PF01467 Cytidylyltransferase-like DCF50_RS04860 PF01336 OB-fold nucleic acid binding domain DCF50_RS04860 PF14579 Helix-hairpin-helix motif DCF50_RS04860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DCF50_RS04860 PF02811 PHP domain DCF50_RS04860 PF07733 Bacterial DNA polymerase III alpha NTPase domain DCF50_RS04865 PF00571 CBS domain DCF50_RS04865 PF00392 Bacterial regulatory proteins, gntR family DCF50_RS04865 PF03061 Thioesterase superfamily DCF50_RS04865 PF07085 DRTGG domain DCF50_RS04880 PF00953 Glycosyl transferase family 4 DCF50_RS04885 PF00588 SpoU rRNA Methylase family DCF50_RS04890 PF00330 Aconitase family (aconitate hydratase) DCF50_RS04895 PF02824 TGS domain DCF50_RS04895 PF04607 Region found in RelA / SpoT proteins DCF50_RS04895 PF13291 ACT domain DCF50_RS04905 PF12706 Beta-lactamase superfamily domain DCF50_RS04920 PF01037 Lrp/AsnC ligand binding domain DCF50_RS04925 PF00155 Aminotransferase class I and II DCF50_RS04930 PF01613 Flavin reductase like domain DCF50_RS04930 PF00301 Rubredoxin DCF50_RS04935 PF12626 Polymerase A arginine-rich C-terminus DCF50_RS04935 PF01743 Poly A polymerase head domain DCF50_RS04935 PF12627 Probable RNA and SrmB- binding site of polymerase A DCF50_RS04940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DCF50_RS04940 PF01842 ACT domain DCF50_RS04940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DCF50_RS04945 PF02073 Thermophilic metalloprotease (M29) DCF50_RS04950 PF00849 RNA pseudouridylate synthase DCF50_RS04960 PF02190 ATP-dependent protease La (LON) substrate-binding domain DCF50_RS04960 PF05362 Lon protease (S16) C-terminal proteolytic domain DCF50_RS04960 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS04975 PF02646 RmuC family DCF50_RS04980 PF10502 Signal peptidase, peptidase S26 DCF50_RS05000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DCF50_RS05000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DCF50_RS05005 PF02595 Glycerate kinase family DCF50_RS05015 PF01699 Sodium/calcium exchanger protein DCF50_RS05030 PF00188 Cysteine-rich secretory protein family DCF50_RS05035 PF02677 Epoxyqueuosine reductase QueH DCF50_RS05045 PF02416 mttA/Hcf106 family DCF50_RS05055 PF00348 Polyprenyl synthetase DCF50_RS05060 PF02416 mttA/Hcf106 family DCF50_RS05065 PF00902 Sec-independent protein translocase protein (TatC) DCF50_RS05075 PF02754 Cysteine-rich domain DCF50_RS05075 PF13183 4Fe-4S dicluster domain DCF50_RS05080 PF01012 Electron transfer flavoprotein domain DCF50_RS05080 PF00766 Electron transfer flavoprotein FAD-binding domain DCF50_RS05080 PF13237 4Fe-4S dicluster domain DCF50_RS05085 PF01012 Electron transfer flavoprotein domain DCF50_RS05090 PF01751 Toprim domain DCF50_RS05095 PF00672 HAMP domain DCF50_RS05095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DCF50_RS05110 PF09547 Stage IV sporulation protein A (spore_IV_A) DCF50_RS05120 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DCF50_RS05120 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DCF50_RS05125 PF02660 Glycerol-3-phosphate acyltransferase DCF50_RS05130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DCF50_RS05130 PF01926 50S ribosome-binding GTPase DCF50_RS05140 PF01098 Cell cycle protein DCF50_RS05145 PF02401 LytB protein DCF50_RS05145 PF00575 S1 RNA binding domain DCF50_RS05150 PF01553 Acyltransferase DCF50_RS05155 PF02224 Cytidylate kinase DCF50_RS05190 PF00392 Bacterial regulatory proteins, gntR family DCF50_RS05190 PF07729 FCD domain DCF50_RS05195 PF01479 S4 domain DCF50_RS05195 PF00849 RNA pseudouridylate synthase DCF50_RS05200 PF07670 Nucleoside recognition DCF50_RS05205 PF07670 Nucleoside recognition DCF50_RS05210 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DCF50_RS05220 PF13091 PLD-like domain DCF50_RS05220 PF13396 Phospholipase_D-nuclease N-terminal DCF50_RS05225 PF04073 Aminoacyl-tRNA editing domain DCF50_RS05230 PF01475 Ferric uptake regulator family DCF50_RS05240 PF02645 Uncharacterised protein, DegV family COG1307 DCF50_RS05255 PF12787 EcsC protein family DCF50_RS05260 PF00355 Rieske [2Fe-2S] domain DCF50_RS05260 PF01266 FAD dependent oxidoreductase DCF50_RS05265 PF00459 Inositol monophosphatase family DCF50_RS05270 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS05275 PF00596 Class II Aldolase and Adducin N-terminal domain DCF50_RS05280 PF00793 DAHP synthetase I family DCF50_RS05295 PF03323 Bacillus/Clostridium GerA spore germination protein DCF50_RS05300 PF17805 AsnC-like ligand binding domain DCF50_RS05300 PF13404 AsnC-type helix-turn-helix domain DCF50_RS05305 PF13186 Iron-sulfur cluster-binding domain DCF50_RS05305 PF04055 Radical SAM superfamily DCF50_RS05310 PF04055 Radical SAM superfamily DCF50_RS05310 PF13186 Iron-sulfur cluster-binding domain DCF50_RS05335 PF03061 Thioesterase superfamily DCF50_RS05340 PF13378 Enolase C-terminal domain-like DCF50_RS05340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DCF50_RS05345 PF00501 AMP-binding enzyme DCF50_RS05345 PF13193 AMP-binding enzyme C-terminal domain DCF50_RS05350 PF00378 Enoyl-CoA hydratase/isomerase DCF50_RS05355 PF12697 Alpha/beta hydrolase family DCF50_RS05360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DCF50_RS05360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DCF50_RS05360 PF16582 Middle domain of thiamine pyrophosphate DCF50_RS05365 PF00425 chorismate binding enzyme DCF50_RS05370 PF00180 Isocitrate/isopropylmalate dehydrogenase DCF50_RS05380 PF03193 RsgA GTPase DCF50_RS05395 PF00535 Glycosyl transferase family 2 DCF50_RS05400 PF00535 Glycosyl transferase family 2 DCF50_RS05400 PF13181 Tetratricopeptide repeat DCF50_RS05410 PF00535 Glycosyl transferase family 2 DCF50_RS05410 PF13181 Tetratricopeptide repeat DCF50_RS05430 PF01741 Large-conductance mechanosensitive channel, MscL DCF50_RS05440 PF00072 Response regulator receiver domain DCF50_RS05445 PF00483 Nucleotidyl transferase DCF50_RS05450 PF00664 ABC transporter transmembrane region DCF50_RS05450 PF00005 ABC transporter DCF50_RS05455 PF13936 Helix-turn-helix domain DCF50_RS05470 PF04055 Radical SAM superfamily DCF50_RS05495 PF13614 AAA domain DCF50_RS05520 PF01370 NAD dependent epimerase/dehydratase family DCF50_RS05535 PF01467 Cytidylyltransferase-like DCF50_RS05545 PF04991 LicD family DCF50_RS05560 PF08645 Polynucleotide kinase 3 phosphatase DCF50_RS05565 PF00483 Nucleotidyl transferase DCF50_RS05570 PF13580 SIS domain DCF50_RS05575 PF08544 GHMP kinases C terminal DCF50_RS05575 PF00288 GHMP kinases N terminal domain DCF50_RS05585 PF01370 NAD dependent epimerase/dehydratase family DCF50_RS05590 PF16363 GDP-mannose 4,6 dehydratase DCF50_RS05600 PF00483 Nucleotidyl transferase DCF50_RS05600 PF01050 Mannose-6-phosphate isomerase DCF50_RS05605 PF02397 Bacterial sugar transferase DCF50_RS05610 PF16363 GDP-mannose 4,6 dehydratase DCF50_RS05615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DCF50_RS05615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DCF50_RS05615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DCF50_RS05615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DCF50_RS05640 PF04055 Radical SAM superfamily DCF50_RS05640 PF06463 Molybdenum Cofactor Synthesis C DCF50_RS05655 PF12708 Pectate lyase superfamily protein DCF50_RS05655 PF13229 Right handed beta helix region DCF50_RS05655 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DCF50_RS05670 PF01934 Protein of unknown function DUF86 DCF50_RS05695 PF00072 Response regulator receiver domain DCF50_RS05720 PF03109 ABC1 family DCF50_RS05735 PF01595 Cyclin M transmembrane N-terminal domain DCF50_RS05735 PF00571 CBS domain DCF50_RS05735 PF03471 Transporter associated domain DCF50_RS05740 PF04055 Radical SAM superfamily DCF50_RS05740 PF13282 Domain of unknown function (DUF4070) DCF50_RS05740 PF02310 B12 binding domain DCF50_RS05745 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS05750 PF13193 AMP-binding enzyme C-terminal domain DCF50_RS05750 PF00501 AMP-binding enzyme DCF50_RS05755 PF04226 Transglycosylase associated protein DCF50_RS05760 PF00781 Diacylglycerol kinase catalytic domain DCF50_RS05765 PF01790 Prolipoprotein diacylglyceryl transferase DCF50_RS05775 PF00156 Phosphoribosyl transferase domain DCF50_RS05780 PF00563 EAL domain DCF50_RS05780 PF03707 Bacterial signalling protein N terminal repeat DCF50_RS05780 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS05785 PF03063 Prismane/CO dehydrogenase family DCF50_RS05790 PF02634 FdhD/NarQ family DCF50_RS05800 PF00324 Amino acid permease DCF50_RS05815 PF02441 Flavoprotein DCF50_RS05825 PF05378 Hydantoinase/oxoprolinase N-terminal region DCF50_RS05825 PF01968 Hydantoinase/oxoprolinase DCF50_RS05830 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DCF50_RS05840 PF02361 Cobalt transport protein DCF50_RS05845 PF00005 ABC transporter DCF50_RS05850 PF01797 Transposase IS200 like DCF50_RS05875 PF08331 Domain of unknown function (DUF1730) DCF50_RS05880 PF01638 HxlR-like helix-turn-helix DCF50_RS05895 PF02310 B12 binding domain DCF50_RS05895 PF02607 B12 binding domain DCF50_RS05910 PF04205 FMN-binding domain DCF50_RS05915 PF08331 Domain of unknown function (DUF1730) DCF50_RS05930 PF13486 Reductive dehalogenase subunit DCF50_RS05930 PF12838 4Fe-4S dicluster domain DCF50_RS05945 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS05950 PF00072 Response regulator receiver domain DCF50_RS05950 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS05970 PF13732 Domain of unknown function (DUF4162) DCF50_RS05970 PF00005 ABC transporter DCF50_RS05975 PF01061 ABC-2 type transporter DCF50_RS05980 PF01209 ubiE/COQ5 methyltransferase family DCF50_RS05985 PF00809 Pterin binding enzyme DCF50_RS05995 PF02310 B12 binding domain DCF50_RS05995 PF02607 B12 binding domain DCF50_RS06005 PF02492 CobW/HypB/UreG, nucleotide-binding domain DCF50_RS06005 PF07683 Cobalamin synthesis protein cobW C-terminal domain DCF50_RS06010 PF00392 Bacterial regulatory proteins, gntR family DCF50_RS06015 PF02310 B12 binding domain DCF50_RS06015 PF02607 B12 binding domain DCF50_RS06025 PF00817 impB/mucB/samB family DCF50_RS06025 PF11799 impB/mucB/samB family C-terminal domain DCF50_RS06030 PF02586 SOS response associated peptidase (SRAP) DCF50_RS06060 PF13419 Haloacid dehalogenase-like hydrolase DCF50_RS06065 PF03466 LysR substrate binding domain DCF50_RS06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DCF50_RS06075 PF02310 B12 binding domain DCF50_RS06075 PF02607 B12 binding domain DCF50_RS06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS06080 PF07694 5TMR of 5TMR-LYT DCF50_RS06080 PF13492 GAF domain DCF50_RS06080 PF06580 Histidine kinase DCF50_RS06090 PF02424 ApbE family DCF50_RS06100 PF12801 4Fe-4S binding domain DCF50_RS06100 PF04205 FMN-binding domain DCF50_RS06110 PF12838 4Fe-4S dicluster domain DCF50_RS06110 PF13486 Reductive dehalogenase subunit DCF50_RS06140 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS06140 PF00589 Phage integrase family DCF50_RS06145 PF00589 Phage integrase family DCF50_RS06145 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS06150 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS06150 PF00589 Phage integrase family DCF50_RS06155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS06160 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS06165 PF01888 CbiD DCF50_RS06210 PF03466 LysR substrate binding domain DCF50_RS06210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DCF50_RS06225 PF01979 Amidohydrolase family DCF50_RS06230 PF01420 Type I restriction modification DNA specificity domain DCF50_RS06235 PF08331 Domain of unknown function (DUF1730) DCF50_RS06245 PF08666 SAF domain DCF50_RS06245 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DCF50_RS06250 PF08666 SAF domain DCF50_RS06275 PF08331 Domain of unknown function (DUF1730) DCF50_RS06280 PF01420 Type I restriction modification DNA specificity domain DCF50_RS06285 PF08331 Domain of unknown function (DUF1730) DCF50_RS06295 PF00809 Pterin binding enzyme DCF50_RS06295 PF02310 B12 binding domain DCF50_RS06295 PF02574 Homocysteine S-methyltransferase DCF50_RS06295 PF02607 B12 binding domain DCF50_RS06295 PF02965 Vitamin B12 dependent methionine synthase, activation domain DCF50_RS06325 PF02801 Beta-ketoacyl synthase, C-terminal domain DCF50_RS06325 PF00109 Beta-ketoacyl synthase, N-terminal domain DCF50_RS06340 PF01548 Transposase DCF50_RS06340 PF02371 Transposase IS116/IS110/IS902 family DCF50_RS06360 PF08331 Domain of unknown function (DUF1730) DCF50_RS06365 PF00881 Nitroreductase family DCF50_RS06390 PF01070 FMN-dependent dehydrogenase DCF50_RS06405 PF01638 HxlR-like helix-turn-helix DCF50_RS06470 PF02661 Fic/DOC family DCF50_RS06470 PF12728 Helix-turn-helix domain DCF50_RS06475 PF01476 LysM domain DCF50_RS06475 PF01551 Peptidase family M23 DCF50_RS06490 PF17841 BID domain of Bartonella effector protein (Bep) DCF50_RS06490 PF02661 Fic/DOC family DCF50_RS06575 PF00437 Type II/IV secretion system protein DCF50_RS06590 PF01478 Type IV leader peptidase family DCF50_RS06590 PF06750 Bacterial Peptidase A24 N-terminal domain DCF50_RS06615 PF04026 SpoVG DCF50_RS06635 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DCF50_RS06635 PF15714 Stage V sporulation protein T C-terminal, transcription factor DCF50_RS06665 PF06750 Bacterial Peptidase A24 N-terminal domain DCF50_RS06665 PF01478 Type IV leader peptidase family DCF50_RS06760 PF00239 Resolvase, N terminal domain DCF50_RS06760 PF02796 Helix-turn-helix domain of resolvase DCF50_RS06820 PF13274 Protein of unknown function (DUF4065) DCF50_RS06825 PF00589 Phage integrase family DCF50_RS06825 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS06845 PF01555 DNA methylase DCF50_RS06880 PF02229 Transcriptional Coactivator p15 (PC4) DCF50_RS06885 PF11867 Domain of unknown function (DUF3387) DCF50_RS06885 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DCF50_RS06885 PF18766 SWI2/SNF2 ATPase DCF50_RS06895 PF01420 Type I restriction modification DNA specificity domain DCF50_RS06900 PF02384 N-6 DNA Methylase DCF50_RS06910 PF01938 TRAM domain DCF50_RS06910 PF05958 tRNA (Uracil-5-)-methyltransferase DCF50_RS06920 PF00682 HMGL-like DCF50_RS06925 PF02637 GatB domain DCF50_RS06925 PF02934 GatB/GatE catalytic domain DCF50_RS06930 PF01425 Amidase DCF50_RS06935 PF02686 Glu-tRNAGln amidotransferase C subunit DCF50_RS06945 PF03120 NAD-dependent DNA ligase OB-fold domain DCF50_RS06945 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DCF50_RS06945 PF12826 Helix-hairpin-helix motif DCF50_RS06945 PF01653 NAD-dependent DNA ligase adenylation domain DCF50_RS06945 PF00533 BRCA1 C Terminus (BRCT) domain DCF50_RS06950 PF00580 UvrD/REP helicase N-terminal domain DCF50_RS06950 PF13361 UvrD-like helicase C-terminal domain DCF50_RS06965 PF01502 Phosphoribosyl-AMP cyclohydrolase DCF50_RS06965 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DCF50_RS06970 PF00977 Histidine biosynthesis protein DCF50_RS06975 PF00977 Histidine biosynthesis protein DCF50_RS06980 PF00117 Glutamine amidotransferase class-I DCF50_RS06985 PF00475 Imidazoleglycerol-phosphate dehydratase DCF50_RS06990 PF00815 Histidinol dehydrogenase DCF50_RS06995 PF01634 ATP phosphoribosyltransferase DCF50_RS07000 PF13393 Histidyl-tRNA synthetase DCF50_RS07005 PF01371 Trp repressor protein DCF50_RS07010 PF00155 Aminotransferase class I and II DCF50_RS07025 PF12127 SigmaW regulon antibacterial DCF50_RS07030 PF01957 NfeD-like C-terminal, partner-binding DCF50_RS07030 PF01972 Serine dehydrogenase proteinase DCF50_RS07040 PF13686 DsrE/DsrF/DrsH-like family DCF50_RS07045 PF00266 Aminotransferase class-V DCF50_RS07065 PF14535 AMP-binding enzyme C-terminal domain DCF50_RS07065 PF00501 AMP-binding enzyme DCF50_RS07070 PF00438 S-adenosylmethionine synthetase, N-terminal domain DCF50_RS07070 PF02772 S-adenosylmethionine synthetase, central domain DCF50_RS07070 PF02773 S-adenosylmethionine synthetase, C-terminal domain DCF50_RS07075 PF02441 Flavoprotein DCF50_RS07075 PF04127 DNA / pantothenate metabolism flavoprotein DCF50_RS07080 PF01192 RNA polymerase Rpb6 DCF50_RS07085 PF00625 Guanylate kinase DCF50_RS07090 PF04025 Domain of unknown function (DUF370) DCF50_RS07095 PF03755 YicC-like family, N-terminal region DCF50_RS07095 PF08340 Domain of unknown function (DUF1732) DCF50_RS07100 PF00155 Aminotransferase class I and II DCF50_RS07105 PF01678 Diaminopimelate epimerase DCF50_RS07110 PF00689 Cation transporting ATPase, C-terminus DCF50_RS07110 PF00690 Cation transporter/ATPase, N-terminus DCF50_RS07115 PF05670 NFACT protein RNA binding domain DCF50_RS07120 PF00156 Phosphoribosyl transferase domain DCF50_RS07125 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS07130 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS07130 PF00072 Response regulator receiver domain DCF50_RS07135 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DCF50_RS07140 PF01180 Dihydroorotate dehydrogenase DCF50_RS07145 PF00970 Oxidoreductase FAD-binding domain DCF50_RS07145 PF00175 Oxidoreductase NAD-binding domain DCF50_RS07145 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DCF50_RS07150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DCF50_RS07150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCF50_RS07150 PF02142 MGS-like domain DCF50_RS07155 PF00117 Glutamine amidotransferase class-I DCF50_RS07155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DCF50_RS07160 PF01979 Amidohydrolase family DCF50_RS07165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DCF50_RS07165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DCF50_RS07175 PF00156 Phosphoribosyl transferase domain DCF50_RS07180 PF00849 RNA pseudouridylate synthase DCF50_RS07180 PF01479 S4 domain DCF50_RS07185 PF01252 Signal peptidase (SPase) II DCF50_RS07190 PF06130 Phosphate propanoyltransferase DCF50_RS07195 PF04472 Cell division protein SepF DCF50_RS07200 PF01168 Alanine racemase, N-terminal domain DCF50_RS07210 PF02578 Multi-copper polyphenol oxidoreductase laccase DCF50_RS07215 PF05239 PRC-barrel domain DCF50_RS07220 PF04542 Sigma-70 region 2 DCF50_RS07220 PF04545 Sigma-70, region 4 DCF50_RS07220 PF04539 Sigma-70 region 3 DCF50_RS07225 PF04545 Sigma-70, region 4 DCF50_RS07225 PF04542 Sigma-70 region 2 DCF50_RS07230 PF03419 Sporulation factor SpoIIGA DCF50_RS07255 PF00091 Tubulin/FtsZ family, GTPase domain DCF50_RS07255 PF12327 FtsZ family, C-terminal domain DCF50_RS07260 PF06947 Protein of unknown function (DUF1290) DCF50_RS07265 PF03799 Cell division protein FtsQ DCF50_RS07265 PF08478 POTRA domain, FtsQ-type DCF50_RS07270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DCF50_RS07275 PF01565 FAD binding domain DCF50_RS07275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DCF50_RS07280 PF03033 Glycosyltransferase family 28 N-terminal domain DCF50_RS07280 PF04101 Glycosyltransferase family 28 C-terminal domain DCF50_RS07285 PF01098 Cell cycle protein DCF50_RS07290 PF02875 Mur ligase family, glutamate ligase domain DCF50_RS07290 PF08245 Mur ligase middle domain DCF50_RS07295 PF00953 Glycosyl transferase family 4 DCF50_RS07295 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DCF50_RS07300 PF02875 Mur ligase family, glutamate ligase domain DCF50_RS07300 PF01225 Mur ligase family, catalytic domain DCF50_RS07300 PF08245 Mur ligase middle domain DCF50_RS07305 PF01225 Mur ligase family, catalytic domain DCF50_RS07305 PF08245 Mur ligase middle domain DCF50_RS07305 PF02875 Mur ligase family, glutamate ligase domain DCF50_RS07310 PF00905 Penicillin binding protein transpeptidase domain DCF50_RS07310 PF03717 Penicillin-binding Protein dimerisation domain DCF50_RS07310 PF03793 PASTA domain DCF50_RS07320 PF01795 MraW methylase family DCF50_RS07325 PF02381 MraZ protein, putative antitoxin-like DCF50_RS07345 PF01475 Ferric uptake regulator family DCF50_RS07355 PF02811 PHP domain DCF50_RS07380 PF03816 Cell envelope-related transcriptional attenuator domain DCF50_RS07390 PF03841 L-seryl-tRNA selenium transferase DCF50_RS07390 PF12390 Selenocysteine synthase N terminal DCF50_RS07400 PF05389 Negative regulator of genetic competence (MecA) DCF50_RS07415 PF01584 CheW-like domain DCF50_RS07420 PF00460 Flagella basal body rod protein DCF50_RS07420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DCF50_RS07425 PF00460 Flagella basal body rod protein DCF50_RS07430 PF00460 Flagella basal body rod protein DCF50_RS07430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DCF50_RS07435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DCF50_RS07435 PF07559 Flagellar basal body protein FlaE DCF50_RS07435 PF00460 Flagella basal body rod protein DCF50_RS07440 PF03963 Flagellar hook capping protein - N-terminal region DCF50_RS07450 PF04542 Sigma-70 region 2 DCF50_RS07450 PF04539 Sigma-70 region 3 DCF50_RS07450 PF04545 Sigma-70, region 4 DCF50_RS07460 PF03975 CheD chemotactic sensory transduction DCF50_RS07475 PF10609 NUBPL iron-transfer P-loop NTPase DCF50_RS07480 PF00448 SRP54-type protein, GTPase domain DCF50_RS07485 PF00771 FHIPEP family DCF50_RS07490 PF01312 FlhB HrpN YscU SpaS Family DCF50_RS07495 PF01311 Bacterial export proteins, family 1 DCF50_RS07500 PF01313 Bacterial export proteins, family 3 DCF50_RS07505 PF00813 FliP family DCF50_RS07515 PF00072 Response regulator receiver domain DCF50_RS07520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DCF50_RS07520 PF04509 CheC-like family DCF50_RS07525 PF02154 Flagellar motor switch protein FliM DCF50_RS07525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DCF50_RS07530 PF03748 Flagellar basal body-associated protein FliL DCF50_RS07535 PF06289 Flagellar and Swarming motility proteins DCF50_RS07545 PF18269 T3SS EscN ATPase C-terminal domain DCF50_RS07545 PF02874 ATP synthase alpha/beta family, beta-barrel domain DCF50_RS07545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DCF50_RS07555 PF01706 FliG C-terminal domain DCF50_RS07555 PF14842 FliG N-terminal domain DCF50_RS07555 PF14841 FliG middle domain DCF50_RS07560 PF01514 Secretory protein of YscJ/FliF family DCF50_RS07560 PF08345 Flagellar M-ring protein C-terminal DCF50_RS07565 PF02049 Flagellar hook-basal body complex protein FliE DCF50_RS07570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DCF50_RS07570 PF00460 Flagella basal body rod protein DCF50_RS07575 PF01339 CheB methylesterase DCF50_RS07575 PF00072 Response regulator receiver domain DCF50_RS07580 PF01584 CheW-like domain DCF50_RS07585 PF01584 CheW-like domain DCF50_RS07585 PF02895 Signal transducing histidine kinase, homodimeric domain DCF50_RS07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS07585 PF01627 Hpt domain DCF50_RS07585 PF07194 P2 response regulator binding domain DCF50_RS07595 PF02561 Flagellar protein FliS DCF50_RS07600 PF02465 Flagellar hook-associated protein 2 N-terminus DCF50_RS07600 PF07195 Flagellar hook-associated protein 2 C-terminus DCF50_RS07610 PF00700 Bacterial flagellin C-terminal helical region DCF50_RS07610 PF00669 Bacterial flagellin N-terminal helical region DCF50_RS07615 PF00700 Bacterial flagellin C-terminal helical region DCF50_RS07615 PF00669 Bacterial flagellin N-terminal helical region DCF50_RS07625 PF13936 Helix-turn-helix domain DCF50_RS07625 PF00665 Integrase core domain DCF50_RS07655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DCF50_RS07655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DCF50_RS07655 PF00205 Thiamine pyrophosphate enzyme, central domain DCF50_RS07660 PF16363 GDP-mannose 4,6 dehydratase DCF50_RS07675 PF02780 Transketolase, C-terminal domain DCF50_RS07675 PF02779 Transketolase, pyrimidine binding domain DCF50_RS07680 PF00456 Transketolase, thiamine diphosphate binding domain DCF50_RS07685 PF16363 GDP-mannose 4,6 dehydratase DCF50_RS07690 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DCF50_RS07695 PF00483 Nucleotidyl transferase DCF50_RS07700 PF00535 Glycosyl transferase family 2 DCF50_RS07705 PF00535 Glycosyl transferase family 2 DCF50_RS07710 PF02599 Global regulator protein family DCF50_RS07715 PF02623 FliW protein DCF50_RS07725 PF00669 Bacterial flagellin N-terminal helical region DCF50_RS07725 PF00700 Bacterial flagellin C-terminal helical region DCF50_RS07730 PF00460 Flagella basal body rod protein DCF50_RS07730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DCF50_RS07745 PF01618 MotA/TolQ/ExbB proton channel family DCF50_RS07750 PF13677 Membrane MotB of proton-channel complex MotA/MotB DCF50_RS07750 PF00691 OmpA family DCF50_RS07755 PF04389 Peptidase family M28 DCF50_RS07755 PF01483 Proprotein convertase P-domain DCF50_RS07760 PF03885 Protein of unknown function (DUF327) DCF50_RS07765 PF01739 CheR methyltransferase, SAM binding domain DCF50_RS07765 PF03705 CheR methyltransferase, all-alpha domain DCF50_RS07770 PF16363 GDP-mannose 4,6 dehydratase DCF50_RS07775 PF00483 Nucleotidyl transferase DCF50_RS07780 PF02709 N-terminal domain of galactosyltransferase DCF50_RS07780 PF00535 Glycosyl transferase family 2 DCF50_RS07785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DCF50_RS07800 PF03600 Citrate transporter DCF50_RS07805 PF02256 Iron hydrogenase small subunit DCF50_RS07805 PF02906 Iron only hydrogenase large subunit, C-terminal domain DCF50_RS07805 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DCF50_RS07805 PF00037 4Fe-4S binding domain DCF50_RS07810 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DCF50_RS07810 PF00037 4Fe-4S binding domain DCF50_RS07810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DCF50_RS07825 PF01478 Type IV leader peptidase family DCF50_RS07825 PF06750 Bacterial Peptidase A24 N-terminal domain DCF50_RS07840 PF02540 NAD synthase DCF50_RS07840 PF00958 GMP synthase C terminal domain DCF50_RS07840 PF00117 Glutamine amidotransferase class-I DCF50_RS07845 PF00156 Phosphoribosyl transferase domain DCF50_RS07860 PF00118 TCP-1/cpn60 chaperonin family DCF50_RS07865 PF00166 Chaperonin 10 Kd subunit DCF50_RS07870 PF00543 Nitrogen regulatory protein P-II DCF50_RS07875 PF12804 MobA-like NTP transferase domain DCF50_RS07880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DCF50_RS07880 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCF50_RS07885 PF01022 Bacterial regulatory protein, arsR family DCF50_RS07890 PF02645 Uncharacterised protein, DegV family COG1307 DCF50_RS07895 PF01047 MarR family DCF50_RS07920 PF01568 Molydopterin dinucleotide binding domain DCF50_RS07920 PF00384 Molybdopterin oxidoreductase DCF50_RS07920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DCF50_RS07925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DCF50_RS07925 PF00384 Molybdopterin oxidoreductase DCF50_RS07925 PF12838 4Fe-4S dicluster domain DCF50_RS07925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DCF50_RS07925 PF01568 Molydopterin dinucleotide binding domain DCF50_RS07930 PF00037 4Fe-4S binding domain DCF50_RS07930 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DCF50_RS07930 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DCF50_RS07940 PF01812 5-formyltetrahydrofolate cyclo-ligase family DCF50_RS07945 PF00814 Glycoprotease family DCF50_RS07950 PF00583 Acetyltransferase (GNAT) family DCF50_RS07955 PF00814 Glycoprotease family DCF50_RS07960 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DCF50_RS07965 PF00449 Urease alpha-subunit, N-terminal domain DCF50_RS07965 PF01979 Amidohydrolase family DCF50_RS07970 PF17674 HHH domain DCF50_RS07970 PF16921 Tex protein YqgF-like domain DCF50_RS07970 PF00575 S1 RNA binding domain DCF50_RS07970 PF09371 Tex-like protein N-terminal domain DCF50_RS07975 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DCF50_RS07985 PF07685 CobB/CobQ-like glutamine amidotransferase domain DCF50_RS07990 PF08353 Domain of unknown function (DUF1727) DCF50_RS07990 PF08245 Mur ligase middle domain DCF50_RS07995 PF00132 Bacterial transferase hexapeptide (six repeats) DCF50_RS08010 PF00994 Probable molybdopterin binding domain DCF50_RS08015 PF01967 MoaC family DCF50_RS08020 PF06463 Molybdenum Cofactor Synthesis C DCF50_RS08020 PF04055 Radical SAM superfamily DCF50_RS08025 PF02464 Competence-damaged protein DCF50_RS08025 PF00994 Probable molybdopterin binding domain DCF50_RS08030 PF03454 MoeA C-terminal region (domain IV) DCF50_RS08030 PF00994 Probable molybdopterin binding domain DCF50_RS08030 PF03453 MoeA N-terminal region (domain I and II) DCF50_RS08035 PF06971 Putative DNA-binding protein N-terminus DCF50_RS08035 PF02629 CoA binding domain DCF50_RS08045 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DCF50_RS08045 PF10531 SLBB domain DCF50_RS08045 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DCF50_RS08050 PF02906 Iron only hydrogenase large subunit, C-terminal domain DCF50_RS08050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DCF50_RS08050 PF02256 Iron hydrogenase small subunit DCF50_RS08050 PF00037 4Fe-4S binding domain DCF50_RS08055 PF04963 Sigma-54 factor, core binding domain DCF50_RS08055 PF04552 Sigma-54, DNA binding domain DCF50_RS08055 PF00309 Sigma-54 factor, Activator interacting domain (AID) DCF50_RS08060 PF01966 HD domain DCF50_RS08065 PF01022 Bacterial regulatory protein, arsR family DCF50_RS08080 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCF50_RS08080 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DCF50_RS08085 PF00310 Glutamine amidotransferases class-II DCF50_RS08085 PF01645 Conserved region in glutamate synthase DCF50_RS08085 PF01493 GXGXG motif DCF50_RS08085 PF04898 Glutamate synthase central domain DCF50_RS08090 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DCF50_RS08090 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DCF50_RS08095 PF01168 Alanine racemase, N-terminal domain DCF50_RS08095 PF00842 Alanine racemase, C-terminal domain DCF50_RS08100 PF01256 Carbohydrate kinase DCF50_RS08100 PF03853 YjeF-related protein N-terminus DCF50_RS08105 PF01648 4'-phosphopantetheinyl transferase superfamily DCF50_RS08110 PF07694 5TMR of 5TMR-LYT DCF50_RS08110 PF13492 GAF domain DCF50_RS08110 PF06580 Histidine kinase DCF50_RS08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS08120 PF04055 Radical SAM superfamily DCF50_RS08120 PF12544 Lysine-2,3-aminomutase DCF50_RS08125 PF04055 Radical SAM superfamily DCF50_RS08125 PF16199 Radical_SAM C-terminal domain DCF50_RS08130 PF00909 Ammonium Transporter Family DCF50_RS08145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DCF50_RS08145 PF01871 AMMECR1 DCF50_RS08160 PF13486 Reductive dehalogenase subunit DCF50_RS08160 PF12838 4Fe-4S dicluster domain DCF50_RS08175 PF05698 Bacterial trigger factor protein (TF) C-terminus DCF50_RS08175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DCF50_RS08175 PF05697 Bacterial trigger factor protein (TF) DCF50_RS08180 PF04205 FMN-binding domain DCF50_RS08180 PF12801 4Fe-4S binding domain DCF50_RS08190 PF13486 Reductive dehalogenase subunit DCF50_RS08190 PF12838 4Fe-4S dicluster domain DCF50_RS08200 PF00027 Cyclic nucleotide-binding domain DCF50_RS08200 PF13545 Crp-like helix-turn-helix domain DCF50_RS08215 PF18318 Glutamine synthetase C-terminal domain DCF50_RS08215 PF00120 Glutamine synthetase, catalytic domain DCF50_RS08215 PF12437 Glutamine synthetase type III N terminal DCF50_RS08220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DCF50_RS08225 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DCF50_RS08225 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DCF50_RS08230 PF00374 Nickel-dependent hydrogenase DCF50_RS08235 PF01292 Prokaryotic cytochrome b561 DCF50_RS08240 PF04055 Radical SAM superfamily DCF50_RS08260 PF00805 Pentapeptide repeats (8 copies) DCF50_RS08275 PF01966 HD domain DCF50_RS08285 PF13333 Integrase core domain DCF50_RS08285 PF00665 Integrase core domain DCF50_RS08285 PF13276 HTH-like domain DCF50_RS08300 PF13411 MerR HTH family regulatory protein DCF50_RS08320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS08320 PF01348 Type II intron maturase DCF50_RS08345 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS08370 PF04055 Radical SAM superfamily DCF50_RS08370 PF06463 Molybdenum Cofactor Synthesis C DCF50_RS08380 PF03477 ATP cone domain DCF50_RS08390 PF02310 B12 binding domain DCF50_RS08390 PF02965 Vitamin B12 dependent methionine synthase, activation domain DCF50_RS08390 PF00809 Pterin binding enzyme DCF50_RS08390 PF02574 Homocysteine S-methyltransferase DCF50_RS08390 PF02607 B12 binding domain DCF50_RS08395 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS08395 PF00072 Response regulator receiver domain DCF50_RS08400 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS08400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS08400 PF00672 HAMP domain DCF50_RS08405 PF02535 ZIP Zinc transporter DCF50_RS08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS08410 PF00183 Hsp90 protein DCF50_RS08425 PF02421 Ferrous iron transport protein B DCF50_RS08425 PF17910 FeoB cytosolic helical domain DCF50_RS08425 PF07664 Ferrous iron transport protein B C terminus DCF50_RS08425 PF04023 FeoA domain DCF50_RS08425 PF07670 Nucleoside recognition DCF50_RS08435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DCF50_RS08440 PF02641 Uncharacterized ACR, COG1993 DCF50_RS08445 PF01177 Asp/Glu/Hydantoin racemase DCF50_RS08450 PF02675 S-adenosylmethionine decarboxylase DCF50_RS08455 PF00682 HMGL-like DCF50_RS08455 PF08502 LeuA allosteric (dimerisation) domain DCF50_RS08460 PF01255 Putative undecaprenyl diphosphate synthase DCF50_RS08470 PF00679 Elongation factor G C-terminus DCF50_RS08470 PF00009 Elongation factor Tu GTP binding domain DCF50_RS08470 PF03144 Elongation factor Tu domain 2 DCF50_RS08470 PF14492 Elongation Factor G, domain II DCF50_RS08480 PF01541 GIY-YIG catalytic domain DCF50_RS08485 PF04204 Homoserine O-succinyltransferase DCF50_RS08490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DCF50_RS08495 PF16653 Saccharopine dehydrogenase C-terminal domain DCF50_RS08495 PF03435 Saccharopine dehydrogenase NADP binding domain DCF50_RS08505 PF01053 Cys/Met metabolism PLP-dependent enzyme DCF50_RS08510 PF01680 SOR/SNZ family DCF50_RS08515 PF00291 Pyridoxal-phosphate dependent enzyme DCF50_RS08520 PF02082 Transcriptional regulator DCF50_RS08525 PF00132 Bacterial transferase hexapeptide (six repeats) DCF50_RS08530 PF02540 NAD synthase DCF50_RS08540 PF00899 ThiF family DCF50_RS08550 PF00403 Heavy-metal-associated domain DCF50_RS08560 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DCF50_RS08565 PF01869 BadF/BadG/BcrA/BcrD ATPase family DCF50_RS08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DCF50_RS08570 PF03466 LysR substrate binding domain DCF50_RS08575 PF01053 Cys/Met metabolism PLP-dependent enzyme DCF50_RS08580 PF00291 Pyridoxal-phosphate dependent enzyme DCF50_RS08585 PF00849 RNA pseudouridylate synthase DCF50_RS08590 PF00266 Aminotransferase class-V DCF50_RS08610 PF13426 PAS domain DCF50_RS08610 PF02954 Bacterial regulatory protein, Fis family DCF50_RS08610 PF00158 Sigma-54 interaction domain DCF50_RS08615 PF01380 SIS domain DCF50_RS08620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DCF50_RS08620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DCF50_RS08620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DCF50_RS08620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DCF50_RS08635 PF02457 DisA bacterial checkpoint controller nucleotide-binding DCF50_RS08640 PF03819 MazG nucleotide pyrophosphohydrolase domain DCF50_RS08650 PF00072 Response regulator receiver domain DCF50_RS08655 PF07859 alpha/beta hydrolase fold DCF50_RS08670 PF10396 GTP-binding protein TrmE N-terminus DCF50_RS08670 PF12631 MnmE helical domain DCF50_RS08670 PF01926 50S ribosome-binding GTPase DCF50_RS08675 PF00206 Lyase DCF50_RS08675 PF10415 Fumarase C C-terminus DCF50_RS08680 PF04055 Radical SAM superfamily DCF50_RS08680 PF06968 Biotin and Thiamin Synthesis associated domain DCF50_RS08720 PF01551 Peptidase family M23 DCF50_RS08720 PF10145 Phage-related minor tail protein DCF50_RS08720 PF01464 Transglycosylase SLT domain DCF50_RS08725 PF05105 Bacteriophage holin family DCF50_RS08750 PF02371 Transposase IS116/IS110/IS902 family DCF50_RS08750 PF01548 Transposase DCF50_RS08920 PF02661 Fic/DOC family DCF50_RS08920 PF13784 Fic/DOC family N-terminal DCF50_RS08925 PF00589 Phage integrase family DCF50_RS08925 PF14659 Phage integrase, N-terminal SAM-like domain DCF50_RS08935 PF13367 PrsW family intramembrane metalloprotease DCF50_RS08940 PF04070 Domain of unknown function (DUF378) DCF50_RS08945 PF07690 Major Facilitator Superfamily DCF50_RS08950 PF13193 AMP-binding enzyme C-terminal domain DCF50_RS08950 PF00501 AMP-binding enzyme DCF50_RS08955 PF01225 Mur ligase family, catalytic domain DCF50_RS08955 PF08245 Mur ligase middle domain DCF50_RS08955 PF02875 Mur ligase family, glutamate ligase domain DCF50_RS08960 PF02557 D-alanyl-D-alanine carboxypeptidase DCF50_RS08970 PF02540 NAD synthase DCF50_RS08975 PF00206 Lyase DCF50_RS08975 PF14698 Argininosuccinate lyase C-terminal DCF50_RS08980 PF00764 Arginosuccinate synthase DCF50_RS08985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DCF50_RS08985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DCF50_RS08990 PF01384 Phosphate transporter family DCF50_RS09000 PF01869 BadF/BadG/BcrA/BcrD ATPase family DCF50_RS09005 PF04024 PspC domain DCF50_RS09015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DCF50_RS09015 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DCF50_RS09020 PF00374 Nickel-dependent hydrogenase DCF50_RS09030 PF01750 Hydrogenase maturation protease DCF50_RS09035 PF00155 Aminotransferase class I and II DCF50_RS09040 PF01592 NifU-like N terminal domain DCF50_RS09040 PF01106 NifU-like domain DCF50_RS09040 PF04324 BFD-like [2Fe-2S] binding domain DCF50_RS09055 PF00202 Aminotransferase class-III DCF50_RS09060 PF00696 Amino acid kinase family DCF50_RS09065 PF01960 ArgJ family DCF50_RS09070 PF01118 Semialdehyde dehydrogenase, NAD binding domain DCF50_RS09070 PF02774 Semialdehyde dehydrogenase, dimerisation domain DCF50_RS09075 PF03734 L,D-transpeptidase catalytic domain DCF50_RS09080 PF00072 Response regulator receiver domain DCF50_RS09080 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS09085 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS09085 PF00672 HAMP domain DCF50_RS09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS09095 PF00005 ABC transporter DCF50_RS09105 PF01520 N-acetylmuramoyl-L-alanine amidase DCF50_RS09105 PF11741 AMIN domain DCF50_RS09110 PF00380 Ribosomal protein S9/S16 DCF50_RS09115 PF00572 Ribosomal protein L13 DCF50_RS09120 PF01416 tRNA pseudouridine synthase DCF50_RS09125 PF01196 Ribosomal protein L17 DCF50_RS09130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DCF50_RS09130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DCF50_RS09130 PF01000 RNA polymerase Rpb3/RpoA insert domain DCF50_RS09135 PF00163 Ribosomal protein S4/S9 N-terminal domain DCF50_RS09135 PF01479 S4 domain DCF50_RS09140 PF00411 Ribosomal protein S11 DCF50_RS09145 PF00416 Ribosomal protein S13/S18 DCF50_RS09150 PF01176 Translation initiation factor 1A / IF-1 DCF50_RS09155 PF00557 Metallopeptidase family M24 DCF50_RS09160 PF05191 Adenylate kinase, active site lid DCF50_RS09165 PF00344 SecY translocase DCF50_RS09170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DCF50_RS09175 PF00333 Ribosomal protein S5, N-terminal domain DCF50_RS09175 PF03719 Ribosomal protein S5, C-terminal domain DCF50_RS09180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DCF50_RS09185 PF00347 Ribosomal protein L6 DCF50_RS09190 PF00410 Ribosomal protein S8 DCF50_RS09195 PF00253 Ribosomal protein S14p/S29e DCF50_RS09200 PF00281 Ribosomal protein L5 DCF50_RS09200 PF00673 ribosomal L5P family C-terminus DCF50_RS09205 PF00467 KOW motif DCF50_RS09205 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DCF50_RS09210 PF00238 Ribosomal protein L14p/L23e DCF50_RS09215 PF00366 Ribosomal protein S17 DCF50_RS09220 PF00831 Ribosomal L29 protein DCF50_RS09225 PF00252 Ribosomal protein L16p/L10e DCF50_RS09230 PF00189 Ribosomal protein S3, C-terminal domain DCF50_RS09230 PF07650 KH domain DCF50_RS09235 PF00237 Ribosomal protein L22p/L17e DCF50_RS09240 PF00203 Ribosomal protein S19 DCF50_RS09245 PF00181 Ribosomal Proteins L2, RNA binding domain DCF50_RS09245 PF03947 Ribosomal Proteins L2, C-terminal domain DCF50_RS09250 PF00276 Ribosomal protein L23 DCF50_RS09255 PF00573 Ribosomal protein L4/L1 family DCF50_RS09260 PF00297 Ribosomal protein L3 DCF50_RS09265 PF00338 Ribosomal protein S10p/S20e DCF50_RS09270 PF03144 Elongation factor Tu domain 2 DCF50_RS09270 PF00009 Elongation factor Tu GTP binding domain DCF50_RS09270 PF03143 Elongation factor Tu C-terminal domain DCF50_RS09275 PF03144 Elongation factor Tu domain 2 DCF50_RS09275 PF00009 Elongation factor Tu GTP binding domain DCF50_RS09275 PF14492 Elongation Factor G, domain II DCF50_RS09275 PF03764 Elongation factor G, domain IV DCF50_RS09275 PF00679 Elongation factor G C-terminus DCF50_RS09280 PF00177 Ribosomal protein S7p/S5e DCF50_RS09285 PF00164 Ribosomal protein S12/S23 DCF50_RS09290 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DCF50_RS09295 PF04983 RNA polymerase Rpb1, domain 3 DCF50_RS09295 PF05000 RNA polymerase Rpb1, domain 4 DCF50_RS09295 PF00623 RNA polymerase Rpb1, domain 2 DCF50_RS09295 PF04997 RNA polymerase Rpb1, domain 1 DCF50_RS09295 PF04998 RNA polymerase Rpb1, domain 5 DCF50_RS09300 PF04565 RNA polymerase Rpb2, domain 3 DCF50_RS09300 PF04563 RNA polymerase beta subunit DCF50_RS09300 PF10385 RNA polymerase beta subunit external 1 domain DCF50_RS09300 PF04560 RNA polymerase Rpb2, domain 7 DCF50_RS09300 PF04561 RNA polymerase Rpb2, domain 2 DCF50_RS09300 PF00562 RNA polymerase Rpb2, domain 6 DCF50_RS09305 PF00542 Ribosomal protein L7/L12 C-terminal domain DCF50_RS09305 PF16320 Ribosomal protein L7/L12 dimerisation domain DCF50_RS09310 PF00466 Ribosomal protein L10 DCF50_RS09315 PF00687 Ribosomal protein L1p/L10e family DCF50_RS09320 PF03946 Ribosomal protein L11, N-terminal domain DCF50_RS09320 PF00298 Ribosomal protein L11, RNA binding domain DCF50_RS09325 PF00467 KOW motif DCF50_RS09325 PF02357 Transcription termination factor nusG DCF50_RS09330 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DCF50_RS09335 PF00471 Ribosomal protein L33 DCF50_RS09345 PF06081 Aromatic acid exporter family member 1 DCF50_RS09350 PF00704 Glycosyl hydrolases family 18 DCF50_RS09350 PF01476 LysM domain DCF50_RS09360 PF00072 Response regulator receiver domain DCF50_RS09385 PF08281 Sigma-70, region 4 DCF50_RS09385 PF04542 Sigma-70 region 2 DCF50_RS09390 PF08032 RNA 2'-O ribose methyltransferase substrate binding DCF50_RS09390 PF00588 SpoU rRNA Methylase family DCF50_RS09395 PF00186 Dihydrofolate reductase DCF50_RS09400 PF02511 Thymidylate synthase complementing protein DCF50_RS09405 PF00636 Ribonuclease III domain DCF50_RS09410 PF01406 tRNA synthetases class I (C) catalytic domain DCF50_RS09410 PF09190 DALR domain DCF50_RS09415 PF00749 tRNA synthetases class I (E and Q), catalytic domain DCF50_RS09420 PF02542 YgbB family DCF50_RS09420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DCF50_RS09435 PF18073 Rubredoxin metal binding domain DCF50_RS09440 PF10431 C-terminal, D2-small domain, of ClpB protein DCF50_RS09440 PF17871 AAA lid domain DCF50_RS09440 PF07724 AAA domain (Cdc48 subfamily) DCF50_RS09440 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS09440 PF02861 Clp amino terminal domain, pathogenicity island component DCF50_RS09445 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DCF50_RS09450 PF02151 UvrB/uvrC motif DCF50_RS09455 PF05848 CtsR N-terminal HTH domain DCF50_RS09455 PF17727 CtsR C-terminal dimerization domain DCF50_RS09465 PF00293 NUDIX domain DCF50_RS09465 PF09297 NADH pyrophosphatase zinc ribbon domain DCF50_RS09475 PF03190 Protein of unknown function, DUF255 DCF50_RS09495 PF00535 Glycosyl transferase family 2 DCF50_RS09495 PF13181 Tetratricopeptide repeat DCF50_RS09515 PF05067 Manganese containing catalase DCF50_RS09525 PF09335 SNARE associated Golgi protein DCF50_RS09575 PF01479 S4 domain DCF50_RS09575 PF00579 tRNA synthetases class I (W and Y) DCF50_RS09580 PF00912 Transglycosylase DCF50_RS09580 PF00905 Penicillin binding protein transpeptidase domain DCF50_RS09585 PF01713 Smr domain DCF50_RS09585 PF00488 MutS domain V DCF50_RS09590 PF01136 Peptidase family U32 DCF50_RS09590 PF16325 Peptidase family U32 C-terminal domain DCF50_RS09610 PF01370 NAD dependent epimerase/dehydratase family DCF50_RS09610 PF08338 Domain of unknown function (DUF1731) DCF50_RS09650 PF01381 Helix-turn-helix DCF50_RS09715 PF13486 Reductive dehalogenase subunit DCF50_RS09715 PF12838 4Fe-4S dicluster domain DCF50_RS09720 PF02254 TrkA-N domain DCF50_RS09720 PF02080 TrkA-C domain DCF50_RS09720 PF00999 Sodium/hydrogen exchanger family DCF50_RS09725 PF13486 Reductive dehalogenase subunit DCF50_RS09725 PF12838 4Fe-4S dicluster domain DCF50_RS09735 PF05167 Uncharacterised ACR (DUF711) DCF50_RS09745 PF05164 Cell division protein ZapA DCF50_RS09750 PF01588 Putative tRNA binding domain DCF50_RS09750 PF03147 Ferredoxin-fold anticodon binding domain DCF50_RS09750 PF03484 tRNA synthetase B5 domain DCF50_RS09750 PF03483 B3/4 domain DCF50_RS09750 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DCF50_RS09755 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DCF50_RS09755 PF01409 tRNA synthetases class II core domain (F) DCF50_RS09760 PF00588 SpoU rRNA Methylase family DCF50_RS09760 PF08032 RNA 2'-O ribose methyltransferase substrate binding DCF50_RS09765 PF00453 Ribosomal protein L20 DCF50_RS09770 PF01632 Ribosomal protein L35 DCF50_RS09775 PF05198 Translation initiation factor IF-3, N-terminal domain DCF50_RS09775 PF00707 Translation initiation factor IF-3, C-terminal domain DCF50_RS09785 PF02608 ABC transporter substrate-binding protein PnrA-like DCF50_RS09790 PF01966 HD domain DCF50_RS09795 PF03129 Anticodon binding domain DCF50_RS09795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DCF50_RS09795 PF02824 TGS domain DCF50_RS09795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DCF50_RS09815 PF01022 Bacterial regulatory protein, arsR family DCF50_RS09820 PF04199 Putative cyclase DCF50_RS09825 PF08448 PAS fold DCF50_RS09825 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS09835 PF17284 Spermidine synthase tetramerisation domain DCF50_RS09840 PF01276 Orn/Lys/Arg decarboxylase, major domain DCF50_RS09840 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DCF50_RS09850 PF00682 HMGL-like DCF50_RS09850 PF08502 LeuA allosteric (dimerisation) domain DCF50_RS09860 PF09582 Iron only nitrogenase protein AnfO (AnfO_nitrog) DCF50_RS09865 PF04055 Radical SAM superfamily DCF50_RS09865 PF02579 Dinitrogenase iron-molybdenum cofactor DCF50_RS09870 PF00148 Nitrogenase component 1 type Oxidoreductase DCF50_RS09875 PF00148 Nitrogenase component 1 type Oxidoreductase DCF50_RS09880 PF12838 4Fe-4S dicluster domain DCF50_RS09885 PF02579 Dinitrogenase iron-molybdenum cofactor DCF50_RS09890 PF11844 Domain of unknown function (DUF3364) DCF50_RS09890 PF00148 Nitrogenase component 1 type Oxidoreductase DCF50_RS09895 PF00148 Nitrogenase component 1 type Oxidoreductase DCF50_RS09900 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DCF50_RS09905 PF00543 Nitrogen regulatory protein P-II DCF50_RS09910 PF00543 Nitrogen regulatory protein P-II DCF50_RS09925 PF02838 Glycosyl hydrolase family 20, domain 2 DCF50_RS09925 PF07555 beta-N-acetylglucosaminidase DCF50_RS09930 PF13276 HTH-like domain DCF50_RS09930 PF13333 Integrase core domain DCF50_RS09930 PF00665 Integrase core domain DCF50_RS09945 PF02492 CobW/HypB/UreG, nucleotide-binding domain DCF50_RS09945 PF07683 Cobalamin synthesis protein cobW C-terminal domain DCF50_RS09955 PF02607 B12 binding domain DCF50_RS09955 PF02310 B12 binding domain DCF50_RS09970 PF07702 UTRA domain DCF50_RS09970 PF00392 Bacterial regulatory proteins, gntR family DCF50_RS10040 PF01546 Peptidase family M20/M25/M40 DCF50_RS10040 PF07687 Peptidase dimerisation domain DCF50_RS10050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DCF50_RS10050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DCF50_RS10055 PF00266 Aminotransferase class-V DCF50_RS10060 PF03734 L,D-transpeptidase catalytic domain DCF50_RS10060 PF01476 LysM domain DCF50_RS10090 PF06750 Bacterial Peptidase A24 N-terminal domain DCF50_RS10090 PF01478 Type IV leader peptidase family DCF50_RS10095 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DCF50_RS10095 PF00437 Type II/IV secretion system protein DCF50_RS10100 PF00437 Type II/IV secretion system protein DCF50_RS10115 PF00114 Pilin (bacterial filament) DCF50_RS10115 PF07963 Prokaryotic N-terminal methylation motif DCF50_RS10120 PF07963 Prokaryotic N-terminal methylation motif DCF50_RS10120 PF00114 Pilin (bacterial filament) DCF50_RS10125 PF04539 Sigma-70 region 3 DCF50_RS10125 PF04545 Sigma-70, region 4 DCF50_RS10125 PF04542 Sigma-70 region 2 DCF50_RS10160 PF00482 Type II secretion system (T2SS), protein F DCF50_RS10240 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DCF50_RS10240 PF00753 Metallo-beta-lactamase superfamily DCF50_RS10240 PF17770 Ribonuclease J C-terminal domain DCF50_RS10245 PF00701 Dihydrodipicolinate synthetase family DCF50_RS10250 PF13840 ACT domain DCF50_RS10250 PF00696 Amino acid kinase family DCF50_RS10255 PF01118 Semialdehyde dehydrogenase, NAD binding domain DCF50_RS10255 PF02774 Semialdehyde dehydrogenase, dimerisation domain DCF50_RS10260 PF02441 Flavoprotein DCF50_RS10265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DCF50_RS10265 PF16924 Dipicolinate synthase subunit A N-terminal domain DCF50_RS10270 PF05173 Dihydrodipicolinate reductase, C-terminus DCF50_RS10270 PF01113 Dihydrodipicolinate reductase, N-terminus DCF50_RS10275 PF05239 PRC-barrel domain DCF50_RS10285 PF07690 Major Facilitator Superfamily DCF50_RS10290 PF00692 dUTPase DCF50_RS10295 PF00675 Insulinase (Peptidase family M16) DCF50_RS10295 PF05193 Peptidase M16 inactive domain DCF50_RS10300 PF00768 D-alanyl-D-alanine carboxypeptidase DCF50_RS10300 PF07943 Penicillin-binding protein 5, C-terminal domain DCF50_RS10305 PF03422 Carbohydrate binding module (family 6) DCF50_RS10305 PF01522 Polysaccharide deacetylase DCF50_RS10305 PF00457 Glycosyl hydrolases family 11 DCF50_RS10310 PF00013 KH domain DCF50_RS10310 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DCF50_RS10310 PF03725 3' exoribonuclease family, domain 2 DCF50_RS10310 PF00575 S1 RNA binding domain DCF50_RS10310 PF01138 3' exoribonuclease family, domain 1 DCF50_RS10315 PF00312 Ribosomal protein S15 DCF50_RS10320 PF06574 FAD synthetase DCF50_RS10320 PF01687 Riboflavin kinase DCF50_RS10325 PF16198 tRNA pseudouridylate synthase B C-terminal domain DCF50_RS10325 PF01509 TruB family pseudouridylate synthase (N terminal domain) DCF50_RS10330 PF01368 DHH family DCF50_RS10330 PF02272 DHHA1 domain DCF50_RS10335 PF02033 Ribosome-binding factor A DCF50_RS10340 PF04760 Translation initiation factor IF-2, N-terminal region DCF50_RS10340 PF00009 Elongation factor Tu GTP binding domain DCF50_RS10340 PF11987 Translation-initiation factor 2 DCF50_RS10350 PF04296 Protein of unknown function (DUF448) DCF50_RS10355 PF13184 NusA-like KH domain DCF50_RS10355 PF08529 NusA N-terminal domain DCF50_RS10355 PF00575 S1 RNA binding domain DCF50_RS10360 PF17384 RimP C-terminal SH3 domain DCF50_RS10360 PF02576 RimP N-terminal domain DCF50_RS10365 PF02811 PHP domain DCF50_RS10365 PF01336 OB-fold nucleic acid binding domain DCF50_RS10365 PF00929 Exonuclease DCF50_RS10365 PF11490 DNA polymerase III polC-type N-terminus II DCF50_RS10365 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DCF50_RS10365 PF07733 Bacterial DNA polymerase III alpha NTPase domain DCF50_RS10365 PF14579 Helix-hairpin-helix motif DCF50_RS10370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DCF50_RS10370 PF04073 Aminoacyl-tRNA editing domain DCF50_RS10370 PF03129 Anticodon binding domain DCF50_RS10375 PF04551 GcpE protein DCF50_RS10380 PF13180 PDZ domain DCF50_RS10380 PF02163 Peptidase family M50 DCF50_RS10385 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DCF50_RS10385 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DCF50_RS10385 PF13288 DXP reductoisomerase C-terminal domain DCF50_RS10390 PF01594 AI-2E family transporter DCF50_RS10400 PF01255 Putative undecaprenyl diphosphate synthase DCF50_RS10410 PF01765 Ribosome recycling factor DCF50_RS10415 PF00696 Amino acid kinase family DCF50_RS10420 PF00889 Elongation factor TS DCF50_RS10425 PF00318 Ribosomal protein S2 DCF50_RS10435 PF06018 CodY GAF-like domain DCF50_RS10435 PF08222 CodY helix-turn-helix domain DCF50_RS10440 PF07724 AAA domain (Cdc48 subfamily) DCF50_RS10440 PF10431 C-terminal, D2-small domain, of ClpB protein DCF50_RS10440 PF07728 AAA domain (dynein-related subfamily) DCF50_RS10445 PF00227 Proteasome subunit DCF50_RS10450 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS10450 PF00589 Phage integrase family DCF50_RS10455 PF01134 Glucose inhibited division protein A DCF50_RS10460 PF01396 Topoisomerase DNA binding C4 zinc finger DCF50_RS10460 PF01751 Toprim domain DCF50_RS10460 PF01131 DNA topoisomerase DCF50_RS10465 PF02481 DNA recombination-mediator protein A DCF50_RS10465 PF17782 DprA winged helix domain DCF50_RS10495 PF01381 Helix-turn-helix DCF50_RS10500 PF00909 Ammonium Transporter Family DCF50_RS10515 PF01842 ACT domain DCF50_RS10515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DCF50_RS10515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DCF50_RS10520 PF00877 NlpC/P60 family DCF50_RS10530 PF03060 Nitronate monooxygenase DCF50_RS10535 PF02735 Ku70/Ku80 beta-barrel domain DCF50_RS10540 PF01068 ATP dependent DNA ligase domain DCF50_RS10540 PF13298 DNA polymerase Ligase (LigD) DCF50_RS10540 PF04679 ATP dependent DNA ligase C terminal region DCF50_RS10545 PF01068 ATP dependent DNA ligase domain DCF50_RS10550 PF00009 Elongation factor Tu GTP binding domain DCF50_RS10550 PF16658 Class II release factor RF3, C-terminal domain DCF50_RS10550 PF03144 Elongation factor Tu domain 2 DCF50_RS10555 PF00403 Heavy-metal-associated domain DCF50_RS10560 PF01022 Bacterial regulatory protein, arsR family DCF50_RS10570 PF00374 Nickel-dependent hydrogenase DCF50_RS10575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DCF50_RS10575 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DCF50_RS10585 PF02021 Uncharacterised protein family UPF0102 DCF50_RS10595 PF00890 FAD binding domain DCF50_RS10595 PF02910 Fumarate reductase flavoprotein C-term DCF50_RS10610 PF01078 Magnesium chelatase, subunit ChlI DCF50_RS10610 PF13335 Magnesium chelatase, subunit ChlI C-terminal DCF50_RS10615 PF01351 Ribonuclease HII DCF50_RS10620 PF01926 50S ribosome-binding GTPase DCF50_RS10625 PF01245 Ribosomal protein L19 DCF50_RS10635 PF09936 SAM-dependent RNA methyltransferase DCF50_RS10640 PF01746 tRNA (Guanine-1)-methyltransferase DCF50_RS10645 PF01782 RimM N-terminal domain DCF50_RS10655 PF00886 Ribosomal protein S16 DCF50_RS10660 PF00448 SRP54-type protein, GTPase domain DCF50_RS10660 PF02978 Signal peptide binding domain DCF50_RS10660 PF02881 SRP54-type protein, helical bundle domain DCF50_RS10665 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DCF50_RS10670 PF00563 EAL domain DCF50_RS10670 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS10670 PF03707 Bacterial signalling protein N terminal repeat DCF50_RS10675 PF01979 Amidohydrolase family DCF50_RS10680 PF01008 Initiation factor 2 subunit family DCF50_RS10685 PF01048 Phosphorylase superfamily DCF50_RS10690 PF00448 SRP54-type protein, GTPase domain DCF50_RS10690 PF02881 SRP54-type protein, helical bundle domain DCF50_RS10695 PF06470 SMC proteins Flexible Hinge Domain DCF50_RS10695 PF02463 RecF/RecN/SMC N terminal domain DCF50_RS10700 PF00035 Double-stranded RNA binding motif DCF50_RS10700 PF14622 Ribonuclease-III-like DCF50_RS10705 PF00550 Phosphopantetheine attachment site DCF50_RS10710 PF02504 Fatty acid synthesis protein DCF50_RS10725 PF00871 Acetokinase family DCF50_RS10730 PF07670 Nucleoside recognition DCF50_RS10745 PF03418 Germination protease DCF50_RS10750 PF00270 DEAD/DEAH box helicase DCF50_RS10750 PF00271 Helicase conserved C-terminal domain DCF50_RS10750 PF17191 RecG wedge domain DCF50_RS10755 PF03313 Serine dehydratase alpha chain DCF50_RS10760 PF01842 ACT domain DCF50_RS10760 PF03315 Serine dehydratase beta chain DCF50_RS10765 PF02734 DAK2 domain DCF50_RS10765 PF13684 Dihydroxyacetone kinase family DCF50_RS10770 PF03780 Asp23 family, cell envelope-related function DCF50_RS10780 PF00834 Ribulose-phosphate 3 epimerase family DCF50_RS10785 PF16745 RsgA N-terminal domain DCF50_RS10785 PF03193 RsgA GTPase DCF50_RS10790 PF03793 PASTA domain DCF50_RS10790 PF00069 Protein kinase domain DCF50_RS10795 PF00905 Penicillin binding protein transpeptidase domain DCF50_RS10800 PF01098 Cell cycle protein DCF50_RS10810 PF16697 Inner membrane component of T3SS, cytoplasmic domain DCF50_RS10815 PF00498 FHA domain DCF50_RS10820 PF04055 Radical SAM superfamily DCF50_RS10825 PF01189 16S rRNA methyltransferase RsmB/F DCF50_RS10825 PF01029 NusB family DCF50_RS10830 PF04298 Putative neutral zinc metallopeptidase DCF50_RS10835 PF00551 Formyl transferase DCF50_RS10835 PF02911 Formyl transferase, C-terminal domain DCF50_RS10840 PF01327 Polypeptide deformylase DCF50_RS10845 PF00271 Helicase conserved C-terminal domain DCF50_RS10845 PF04851 Type III restriction enzyme, res subunit DCF50_RS10845 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DCF50_RS10845 PF18074 Primosomal protein N C-terminal domain DCF50_RS10845 PF17764 3′ DNA-binding domain (3′BD) DCF50_RS10850 PF01209 ubiE/COQ5 methyltransferase family DCF50_RS10855 PF02219 Methylenetetrahydrofolate reductase DCF50_RS10860 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DCF50_RS10860 PF02843 Phosphoribosylglycinamide synthetase, C domain DCF50_RS10860 PF02844 Phosphoribosylglycinamide synthetase, N domain DCF50_RS10865 PF01808 AICARFT/IMPCHase bienzyme DCF50_RS10865 PF02142 MGS-like domain DCF50_RS10870 PF00551 Formyl transferase DCF50_RS10875 PF02769 AIR synthase related protein, C-terminal domain DCF50_RS10875 PF00586 AIR synthase related protein, N-terminal domain DCF50_RS10880 PF00156 Phosphoribosyl transferase domain DCF50_RS10885 PF01259 SAICAR synthetase DCF50_RS10890 PF00206 Lyase DCF50_RS10890 PF10397 Adenylosuccinate lyase C-terminus DCF50_RS10895 PF00731 AIR carboxylase DCF50_RS10900 PF11871 Domain of unknown function (DUF3391) DCF50_RS10900 PF01966 HD domain DCF50_RS10910 PF00005 ABC transporter DCF50_RS10930 PF01548 Transposase DCF50_RS10930 PF02371 Transposase IS116/IS110/IS902 family DCF50_RS10935 PF13486 Reductive dehalogenase subunit DCF50_RS10935 PF12838 4Fe-4S dicluster domain DCF50_RS10940 PF01546 Peptidase family M20/M25/M40 DCF50_RS10950 PF03061 Thioesterase superfamily DCF50_RS10965 PF01464 Transglycosylase SLT domain DCF50_RS10975 PF01817 Chorismate mutase type II DCF50_RS10975 PF00800 Prephenate dehydratase DCF50_RS10980 PF01264 Chorismate synthase DCF50_RS10985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DCF50_RS10990 PF02153 Prephenate dehydrogenase DCF50_RS10990 PF01842 ACT domain DCF50_RS10995 PF18152 DAHP synthase ferredoxin-like domain DCF50_RS10995 PF00793 DAHP synthetase I family DCF50_RS11005 PF00950 ABC 3 transport family DCF50_RS11010 PF00005 ABC transporter DCF50_RS11020 PF01475 Ferric uptake regulator family DCF50_RS11025 PF12705 PD-(D/E)XK nuclease superfamily DCF50_RS11025 PF13361 UvrD-like helicase C-terminal domain DCF50_RS11025 PF00580 UvrD/REP helicase N-terminal domain DCF50_RS11030 PF12705 PD-(D/E)XK nuclease superfamily DCF50_RS11050 PF00374 Nickel-dependent hydrogenase DCF50_RS11050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DCF50_RS11060 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DCF50_RS11065 PF00146 NADH dehydrogenase DCF50_RS11070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DCF50_RS11070 PF00361 Proton-conducting membrane transporter DCF50_RS11070 PF13244 Domain of unknown function (DUF4040) DCF50_RS11075 PF13247 4Fe-4S dicluster domain DCF50_RS11075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DCF50_RS11075 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCF50_RS11080 PF00970 Oxidoreductase FAD-binding domain DCF50_RS11080 PF00175 Oxidoreductase NAD-binding domain DCF50_RS11080 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DCF50_RS11095 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DCF50_RS11100 PF09382 RQC domain DCF50_RS11100 PF16124 RecQ zinc-binding DCF50_RS11100 PF00570 HRDC domain DCF50_RS11100 PF00271 Helicase conserved C-terminal domain DCF50_RS11100 PF00270 DEAD/DEAH box helicase DCF50_RS11120 PF12848 ABC transporter DCF50_RS11120 PF00005 ABC transporter DCF50_RS11120 PF16326 ABC transporter C-terminal domain DCF50_RS11125 PF01458 Uncharacterized protein family (UPF0051) DCF50_RS11130 PF00005 ABC transporter DCF50_RS11155 PF02163 Peptidase family M50 DCF50_RS11165 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 DCF50_RS11170 PF16916 Dimerisation domain of Zinc Transporter DCF50_RS11170 PF01545 Cation efflux family DCF50_RS11185 PF00690 Cation transporter/ATPase, N-terminus DCF50_RS11185 PF00689 Cation transporting ATPase, C-terminus DCF50_RS11195 PF13520 Amino acid permease DCF50_RS11200 PF00072 Response regulator receiver domain DCF50_RS11200 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS11205 PF13493 Domain of unknown function (DUF4118) DCF50_RS11205 PF02702 Osmosensitive K+ channel His kinase sensor domain DCF50_RS11205 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS11210 PF00072 Response regulator receiver domain DCF50_RS11210 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS11220 PF00005 ABC transporter DCF50_RS11225 PF02687 FtsX-like permease family DCF50_RS11230 PF02742 Iron dependent repressor, metal binding and dimerisation domain DCF50_RS11230 PF01325 Iron dependent repressor, N-terminal DNA binding domain DCF50_RS11235 PF01566 Natural resistance-associated macrophage protein DCF50_RS11240 PF07690 Major Facilitator Superfamily DCF50_RS11245 PF03323 Bacillus/Clostridium GerA spore germination protein DCF50_RS11250 PF05504 Spore germination B3/ GerAC like, C-terminal DCF50_RS11255 PF03845 Spore germination protein DCF50_RS11270 PF02559 CarD-like/TRCF domain DCF50_RS11275 PF00465 Iron-containing alcohol dehydrogenase DCF50_RS11285 PF04055 Radical SAM superfamily DCF50_RS11290 PF01228 Glycine radical DCF50_RS11290 PF02901 Pyruvate formate lyase-like DCF50_RS11295 PF00069 Protein kinase domain DCF50_RS11305 PF01545 Cation efflux family DCF50_RS11305 PF16916 Dimerisation domain of Zinc Transporter DCF50_RS11330 PF00970 Oxidoreductase FAD-binding domain DCF50_RS11330 PF00111 2Fe-2S iron-sulfur cluster binding domain DCF50_RS11330 PF00175 Oxidoreductase NAD-binding domain DCF50_RS11335 PF01063 Amino-transferase class IV DCF50_RS11340 PF00117 Glutamine amidotransferase class-I DCF50_RS11340 PF00425 chorismate binding enzyme DCF50_RS11340 PF04715 Anthranilate synthase component I, N terminal region DCF50_RS11345 PF00361 Proton-conducting membrane transporter DCF50_RS11350 PF00361 Proton-conducting membrane transporter DCF50_RS11355 PF00361 Proton-conducting membrane transporter DCF50_RS11355 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DCF50_RS11355 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DCF50_RS11360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DCF50_RS11365 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DCF50_RS11370 PF12838 4Fe-4S dicluster domain DCF50_RS11375 PF00146 NADH dehydrogenase DCF50_RS11380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DCF50_RS11385 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DCF50_RS11390 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DCF50_RS11395 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DCF50_RS11400 PF06397 Desulfoferrodoxin, N-terminal domain DCF50_RS11400 PF01880 Desulfoferrodoxin DCF50_RS11405 PF00753 Metallo-beta-lactamase superfamily DCF50_RS11405 PF00258 Flavodoxin DCF50_RS11420 PF02915 Rubrerythrin DCF50_RS11425 PF01557 Fumarylacetoacetate (FAA) hydrolase family DCF50_RS11430 PF03006 Haemolysin-III related DCF50_RS11435 PF04647 Accessory gene regulator B DCF50_RS11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS11445 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS11445 PF00989 PAS fold DCF50_RS11455 PF00682 HMGL-like DCF50_RS11455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCF50_RS11455 PF00289 Biotin carboxylase, N-terminal domain DCF50_RS11455 PF02785 Biotin carboxylase C-terminal domain DCF50_RS11455 PF00364 Biotin-requiring enzyme DCF50_RS11455 PF02436 Conserved carboxylase domain DCF50_RS11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DCF50_RS11490 PF01726 LexA DNA binding domain DCF50_RS11490 PF00717 Peptidase S24-like DCF50_RS11500 PF02219 Methylenetetrahydrofolate reductase DCF50_RS11505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DCF50_RS11505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCF50_RS11505 PF02142 MGS-like domain DCF50_RS11510 PF00072 Response regulator receiver domain DCF50_RS11515 PF00072 Response regulator receiver domain DCF50_RS11515 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DCF50_RS11515 PF01627 Hpt domain DCF50_RS11515 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS11515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS11515 PF00672 HAMP domain DCF50_RS11520 PF00072 Response regulator receiver domain DCF50_RS11520 PF01339 CheB methylesterase DCF50_RS11525 PF03705 CheR methyltransferase, all-alpha domain DCF50_RS11525 PF01739 CheR methyltransferase, SAM binding domain DCF50_RS11530 PF02203 Tar ligand binding domain homologue DCF50_RS11530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DCF50_RS11530 PF00672 HAMP domain DCF50_RS11535 PF01584 CheW-like domain DCF50_RS11540 PF02895 Signal transducing histidine kinase, homodimeric domain DCF50_RS11540 PF07194 P2 response regulator binding domain DCF50_RS11540 PF01584 CheW-like domain DCF50_RS11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS11540 PF01627 Hpt domain DCF50_RS11545 PF00072 Response regulator receiver domain DCF50_RS11550 PF00440 Bacterial regulatory proteins, tetR family DCF50_RS11550 PF08361 MAATS-type transcriptional repressor, C-terminal region DCF50_RS11570 PF02361 Cobalt transport protein DCF50_RS11575 PF00005 ABC transporter DCF50_RS11580 PF00005 ABC transporter DCF50_RS11600 PF03323 Bacillus/Clostridium GerA spore germination protein DCF50_RS11615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCF50_RS11615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DCF50_RS11615 PF02142 MGS-like domain DCF50_RS11620 PF00117 Glutamine amidotransferase class-I DCF50_RS11620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DCF50_RS11625 PF00535 Glycosyl transferase family 2 DCF50_RS11645 PF00005 ABC transporter DCF50_RS11650 PF11799 impB/mucB/samB family C-terminal domain DCF50_RS11650 PF00817 impB/mucB/samB family DCF50_RS11650 PF11798 IMS family HHH motif DCF50_RS11655 PF02416 mttA/Hcf106 family DCF50_RS11660 PF00902 Sec-independent protein translocase protein (TatC) DCF50_RS11670 PF02416 mttA/Hcf106 family DCF50_RS11675 PF12838 4Fe-4S dicluster domain DCF50_RS11675 PF13486 Reductive dehalogenase subunit DCF50_RS11705 PF02310 B12 binding domain DCF50_RS11705 PF02607 B12 binding domain DCF50_RS11710 PF13486 Reductive dehalogenase subunit DCF50_RS11710 PF12838 4Fe-4S dicluster domain DCF50_RS11715 PF12838 4Fe-4S dicluster domain DCF50_RS11715 PF13486 Reductive dehalogenase subunit DCF50_RS11735 PF12801 4Fe-4S binding domain DCF50_RS11745 PF13486 Reductive dehalogenase subunit DCF50_RS11745 PF12838 4Fe-4S dicluster domain DCF50_RS11755 PF12801 4Fe-4S binding domain DCF50_RS11765 PF12838 4Fe-4S dicluster domain DCF50_RS11765 PF13486 Reductive dehalogenase subunit DCF50_RS11785 PF04205 FMN-binding domain DCF50_RS11795 PF12838 4Fe-4S dicluster domain DCF50_RS11795 PF13486 Reductive dehalogenase subunit DCF50_RS11805 PF13333 Integrase core domain DCF50_RS11805 PF00665 Integrase core domain DCF50_RS11805 PF13276 HTH-like domain DCF50_RS11815 PF13486 Reductive dehalogenase subunit DCF50_RS11815 PF12838 4Fe-4S dicluster domain DCF50_RS11840 PF06271 RDD family DCF50_RS11845 PF01343 Peptidase family S49 DCF50_RS11850 PF13411 MerR HTH family regulatory protein DCF50_RS11850 PF06445 GyrI-like small molecule binding domain DCF50_RS11875 PF08279 HTH domain DCF50_RS11875 PF13280 WYL domain DCF50_RS11880 PF01479 S4 domain DCF50_RS11880 PF00849 RNA pseudouridylate synthase DCF50_RS11885 PF09962 Uncharacterized conserved protein (DUF2196) DCF50_RS11895 PF00171 Aldehyde dehydrogenase family DCF50_RS11920 PF02607 B12 binding domain DCF50_RS11920 PF02310 B12 binding domain DCF50_RS11925 PF00072 Response regulator receiver domain DCF50_RS11925 PF12833 Helix-turn-helix domain DCF50_RS11935 PF02310 B12 binding domain DCF50_RS11935 PF02607 B12 binding domain DCF50_RS11955 PF02492 CobW/HypB/UreG, nucleotide-binding domain DCF50_RS11955 PF07683 Cobalamin synthesis protein cobW C-terminal domain DCF50_RS11990 PF13186 Iron-sulfur cluster-binding domain DCF50_RS11990 PF04055 Radical SAM superfamily DCF50_RS11995 PF02915 Rubrerythrin DCF50_RS12000 PF00890 FAD binding domain DCF50_RS12010 PF00127 Copper binding proteins, plastocyanin/azurin family DCF50_RS12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS12025 PF00672 HAMP domain DCF50_RS12025 PF00072 Response regulator receiver domain DCF50_RS12025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DCF50_RS12025 PF01627 Hpt domain DCF50_RS12025 PF01627 Hpt domain DCF50_RS12025 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS12025 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS12025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DCF50_RS12025 PF00672 HAMP domain DCF50_RS12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS12025 PF00072 Response regulator receiver domain DCF50_RS12030 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS12030 PF00072 Response regulator receiver domain DCF50_RS12045 PF00672 HAMP domain DCF50_RS12045 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS12045 PF01627 Hpt domain DCF50_RS12045 PF00072 Response regulator receiver domain DCF50_RS12045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DCF50_RS12055 PF00005 ABC transporter DCF50_RS12060 PF00392 Bacterial regulatory proteins, gntR family DCF50_RS12070 PF13732 Domain of unknown function (DUF4162) DCF50_RS12070 PF00005 ABC transporter DCF50_RS12075 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS12075 PF00989 PAS fold DCF50_RS12075 PF16736 Single Cache-like DCF50_RS12075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS12080 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS12080 PF00072 Response regulator receiver domain DCF50_RS12130 PF08279 HTH domain DCF50_RS12130 PF13280 WYL domain DCF50_RS12165 PF04851 Type III restriction enzyme, res subunit DCF50_RS12165 PF00271 Helicase conserved C-terminal domain DCF50_RS12170 PF00266 Aminotransferase class-V DCF50_RS12230 PF00293 NUDIX domain DCF50_RS12240 PF01494 FAD binding domain DCF50_RS12250 PF00293 NUDIX domain DCF50_RS12265 PF13538 UvrD-like helicase C-terminal domain DCF50_RS12270 PF04122 Putative cell wall binding repeat 2 DCF50_RS12270 PF01520 N-acetylmuramoyl-L-alanine amidase DCF50_RS12275 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS12280 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS12285 PF01641 SelR domain DCF50_RS12285 PF01625 Peptide methionine sulfoxide reductase DCF50_RS12315 PF00881 Nitroreductase family DCF50_RS12320 PF04122 Putative cell wall binding repeat 2 DCF50_RS12320 PF01520 N-acetylmuramoyl-L-alanine amidase DCF50_RS12330 PF00005 ABC transporter DCF50_RS12350 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DCF50_RS12375 PF01906 Putative heavy-metal-binding DCF50_RS12380 PF00271 Helicase conserved C-terminal domain DCF50_RS12380 PF04434 SWIM zinc finger DCF50_RS12380 PF00176 SNF2 family N-terminal domain DCF50_RS12390 PF00563 EAL domain DCF50_RS12390 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS12390 PF03707 Bacterial signalling protein N terminal repeat DCF50_RS12395 PF00248 Aldo/keto reductase family DCF50_RS12410 PF00269 Small, acid-soluble spore proteins, alpha/beta type DCF50_RS12425 PF13443 Cro/C1-type HTH DNA-binding domain DCF50_RS12440 PF00684 DnaJ central domain DCF50_RS12440 PF01556 DnaJ C terminal domain DCF50_RS12440 PF00226 DnaJ domain DCF50_RS12450 PF00005 ABC transporter DCF50_RS12450 PF13732 Domain of unknown function (DUF4162) DCF50_RS12465 PF04542 Sigma-70 region 2 DCF50_RS12465 PF08281 Sigma-70, region 4 DCF50_RS12475 PF03816 Cell envelope-related transcriptional attenuator domain DCF50_RS12500 PF01784 NIF3 (NGG1p interacting factor 3) DCF50_RS12505 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DCF50_RS12520 PF03979 Sigma-70 factor, region 1.1 DCF50_RS12520 PF00140 Sigma-70 factor, region 1.2 DCF50_RS12520 PF04542 Sigma-70 region 2 DCF50_RS12520 PF04539 Sigma-70 region 3 DCF50_RS12520 PF04545 Sigma-70, region 4 DCF50_RS12525 PF08275 DNA primase catalytic core, N-terminal domain DCF50_RS12525 PF10410 DnaB-helicase binding domain of primase DCF50_RS12525 PF01807 CHC2 zinc finger DCF50_RS12530 PF13286 Phosphohydrolase-associated domain DCF50_RS12530 PF01966 HD domain DCF50_RS12535 PF00391 PEP-utilising enzyme, mobile domain DCF50_RS12535 PF02896 PEP-utilising enzyme, TIM barrel domain DCF50_RS12535 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DCF50_RS12540 PF03618 Kinase/pyrophosphorylase DCF50_RS12545 PF00571 CBS domain DCF50_RS12545 PF08279 HTH domain DCF50_RS12550 PF02092 Glycyl-tRNA synthetase beta subunit DCF50_RS12550 PF05746 DALR anticodon binding domain DCF50_RS12555 PF02091 Glycyl-tRNA synthetase alpha subunit DCF50_RS12565 PF11967 Recombination protein O N terminal DCF50_RS12565 PF02565 Recombination protein O C terminal DCF50_RS12570 PF01791 DeoC/LacD family aldolase DCF50_RS12575 PF01926 50S ribosome-binding GTPase DCF50_RS12575 PF07650 KH domain DCF50_RS12580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DCF50_RS12590 PF02130 Uncharacterized protein family UPF0054 DCF50_RS12595 PF01966 HD domain DCF50_RS12595 PF07698 7TM receptor with intracellular HD hydrolase DCF50_RS12595 PF07697 7TM-HD extracellular DCF50_RS12600 PF02562 PhoH-like protein DCF50_RS12615 PF09424 Yqey-like protein DCF50_RS12620 PF01165 Ribosomal protein S21 DCF50_RS12625 PF01230 HIT domain DCF50_RS12635 PF04055 Radical SAM superfamily DCF50_RS12635 PF01938 TRAM domain DCF50_RS12635 PF00919 Uncharacterized protein family UPF0004 DCF50_RS12640 PF04452 RNA methyltransferase DCF50_RS12650 PF00684 DnaJ central domain DCF50_RS12650 PF01556 DnaJ C terminal domain DCF50_RS12650 PF00226 DnaJ domain DCF50_RS12655 PF00012 Hsp70 protein DCF50_RS12660 PF01025 GrpE DCF50_RS12665 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DCF50_RS12665 PF01628 HrcA protein C terminal domain DCF50_RS12675 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DCF50_RS12675 PF01628 HrcA protein C terminal domain DCF50_RS12680 PF06969 HemN C-terminal domain DCF50_RS12680 PF04055 Radical SAM superfamily DCF50_RS12685 PF00009 Elongation factor Tu GTP binding domain DCF50_RS12685 PF00679 Elongation factor G C-terminus DCF50_RS12685 PF06421 GTP-binding protein LepA C-terminus DCF50_RS12685 PF03144 Elongation factor Tu domain 2 DCF50_RS12690 PF03023 Lipid II flippase MurJ DCF50_RS12705 PF00133 tRNA synthetases class I (I, L, M and V) DCF50_RS12705 PF08264 Anticodon-binding domain of tRNA DCF50_RS12715 PF00005 ABC transporter DCF50_RS12720 PF00005 ABC transporter DCF50_RS12720 PF12399 Branched-chain amino acid ATP-binding cassette transporter DCF50_RS12725 PF11862 Domain of unknown function (DUF3382) DCF50_RS12725 PF02653 Branched-chain amino acid transport system / permease component DCF50_RS12730 PF02653 Branched-chain amino acid transport system / permease component DCF50_RS12740 PF01649 Ribosomal protein S20 DCF50_RS12750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DCF50_RS12755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DCF50_RS12770 PF10531 SLBB domain DCF50_RS12785 PF09334 tRNA synthetases class I (M) DCF50_RS12785 PF08264 Anticodon-binding domain of tRNA DCF50_RS12785 PF00133 tRNA synthetases class I (I, L, M and V) DCF50_RS12785 PF13603 Leucyl-tRNA synthetase, Domain 2 DCF50_RS12800 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DCF50_RS12805 PF01467 Cytidylyltransferase-like DCF50_RS12810 PF01985 CRS1 / YhbY (CRM) domain DCF50_RS12815 PF01926 50S ribosome-binding GTPase DCF50_RS12815 PF01018 GTP1/OBG DCF50_RS12815 PF09269 Domain of unknown function (DUF1967) DCF50_RS12825 PF01016 Ribosomal L27 protein DCF50_RS12830 PF00829 Ribosomal prokaryotic L21 protein DCF50_RS12835 PF10150 Ribonuclease E/G family DCF50_RS12835 PF00575 S1 RNA binding domain DCF50_RS12855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DCF50_RS12855 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DCF50_RS12875 PF01098 Cell cycle protein DCF50_RS12880 PF03776 Septum formation topological specificity factor MinE DCF50_RS12885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DCF50_RS12890 PF00905 Penicillin binding protein transpeptidase domain DCF50_RS12890 PF03717 Penicillin-binding Protein dimerisation domain DCF50_RS12910 PF04002 RadC-like JAB domain DCF50_RS12915 PF02545 Maf-like protein DCF50_RS12920 PF00682 HMGL-like DCF50_RS12920 PF08502 LeuA allosteric (dimerisation) domain DCF50_RS12925 PF06971 Putative DNA-binding protein N-terminus DCF50_RS12925 PF02629 CoA binding domain DCF50_RS12930 PF05036 Sporulation related domain DCF50_RS12935 PF00072 Response regulator receiver domain DCF50_RS12935 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS12940 PF08245 Mur ligase middle domain DCF50_RS12940 PF02875 Mur ligase family, glutamate ligase domain DCF50_RS12945 PF00133 tRNA synthetases class I (I, L, M and V) DCF50_RS12945 PF08264 Anticodon-binding domain of tRNA DCF50_RS12945 PF10458 Valyl tRNA synthetase tRNA binding arm DCF50_RS12950 PF00753 Metallo-beta-lactamase superfamily DCF50_RS12950 PF17770 Ribonuclease J C-terminal domain DCF50_RS12950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DCF50_RS12955 PF00892 EamA-like transporter family DCF50_RS12960 PF00535 Glycosyl transferase family 2 DCF50_RS12980 PF01926 50S ribosome-binding GTPase DCF50_RS12985 PF05362 Lon protease (S16) C-terminal proteolytic domain DCF50_RS12985 PF02190 ATP-dependent protease La (LON) substrate-binding domain DCF50_RS12985 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS12990 PF05362 Lon protease (S16) C-terminal proteolytic domain DCF50_RS12990 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS13005 PF01497 Periplasmic binding protein DCF50_RS13010 PF01032 FecCD transport family DCF50_RS13015 PF00005 ABC transporter DCF50_RS13025 PF10431 C-terminal, D2-small domain, of ClpB protein DCF50_RS13025 PF06689 ClpX C4-type zinc finger DCF50_RS13025 PF07724 AAA domain (Cdc48 subfamily) DCF50_RS13030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DCF50_RS13030 PF05697 Bacterial trigger factor protein (TF) DCF50_RS13030 PF05698 Bacterial trigger factor protein (TF) C-terminus DCF50_RS13035 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DCF50_RS13035 PF04101 Glycosyltransferase family 28 C-terminal domain DCF50_RS13055 PF09339 IclR helix-turn-helix domain DCF50_RS13055 PF01614 Bacterial transcriptional regulator DCF50_RS13060 PF01520 N-acetylmuramoyl-L-alanine amidase DCF50_RS13060 PF04122 Putative cell wall binding repeat 2 DCF50_RS13080 PF01725 Ham1 family DCF50_RS13085 PF01138 3' exoribonuclease family, domain 1 DCF50_RS13085 PF03725 3' exoribonuclease family, domain 2 DCF50_RS13095 PF01596 O-methyltransferase DCF50_RS13100 PF05681 Fumarate hydratase (Fumerase) DCF50_RS13100 PF05683 Fumarase C-terminus DCF50_RS13110 PF01047 MarR family DCF50_RS13120 PF00072 Response regulator receiver domain DCF50_RS13120 PF04397 LytTr DNA-binding domain DCF50_RS13125 PF09551 Stage II sporulation protein R (spore_II_R) DCF50_RS13160 PF07486 Cell Wall Hydrolase DCF50_RS13160 PF01471 Putative peptidoglycan binding domain DCF50_RS13165 PF03572 Peptidase family S41 DCF50_RS13165 PF13180 PDZ domain DCF50_RS13170 PF01594 AI-2E family transporter DCF50_RS13175 PF00440 Bacterial regulatory proteins, tetR family DCF50_RS13180 PF00873 AcrB/AcrD/AcrF family DCF50_RS13185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DCF50_RS13210 PF01520 N-acetylmuramoyl-L-alanine amidase DCF50_RS13210 PF04122 Putative cell wall binding repeat 2 DCF50_RS13215 PF00082 Subtilase family DCF50_RS13220 PF12704 MacB-like periplasmic core domain DCF50_RS13220 PF02687 FtsX-like permease family DCF50_RS13225 PF00005 ABC transporter DCF50_RS13250 PF01520 N-acetylmuramoyl-L-alanine amidase DCF50_RS13250 PF04122 Putative cell wall binding repeat 2 DCF50_RS13255 PF00082 Subtilase family DCF50_RS13260 PF01520 N-acetylmuramoyl-L-alanine amidase DCF50_RS13260 PF04122 Putative cell wall binding repeat 2 DCF50_RS13265 PF00704 Glycosyl hydrolases family 18 DCF50_RS13270 PF02397 Bacterial sugar transferase DCF50_RS13275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DCF50_RS13305 PF13439 Glycosyltransferase Family 4 DCF50_RS13305 PF00534 Glycosyl transferases group 1 DCF50_RS13315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DCF50_RS13330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DCF50_RS13330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DCF50_RS13335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DCF50_RS13335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DCF50_RS13335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DCF50_RS13340 PF02719 Polysaccharide biosynthesis protein DCF50_RS13345 PF01520 N-acetylmuramoyl-L-alanine amidase DCF50_RS13345 PF04122 Putative cell wall binding repeat 2 DCF50_RS13365 PF01022 Bacterial regulatory protein, arsR family DCF50_RS13375 PF00483 Nucleotidyl transferase DCF50_RS13380 PF00574 Clp protease DCF50_RS13385 PF00011 Hsp20/alpha crystallin family DCF50_RS13390 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DCF50_RS13390 PF00534 Glycosyl transferases group 1 DCF50_RS13395 PF00285 Citrate synthase, C-terminal domain DCF50_RS13410 PF02237 Biotin protein ligase C terminal domain DCF50_RS13410 PF08279 HTH domain DCF50_RS13410 PF03099 Biotin/lipoate A/B protein ligase family DCF50_RS13415 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DCF50_RS13420 PF17848 Acetyl-coA carboxylase zinc finger domain DCF50_RS13420 PF01039 Carboxyl transferase domain DCF50_RS13425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCF50_RS13425 PF02785 Biotin carboxylase C-terminal domain DCF50_RS13425 PF00289 Biotin carboxylase, N-terminal domain DCF50_RS13430 PF07977 FabA-like domain DCF50_RS13435 PF00364 Biotin-requiring enzyme DCF50_RS13440 PF00109 Beta-ketoacyl synthase, N-terminal domain DCF50_RS13440 PF02801 Beta-ketoacyl synthase, C-terminal domain DCF50_RS13450 PF00698 Acyl transferase domain DCF50_RS13455 PF03060 Nitronate monooxygenase DCF50_RS13460 PF00550 Phosphopantetheine attachment site DCF50_RS13465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DCF50_RS13465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DCF50_RS13490 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS13495 PF00072 Response regulator receiver domain DCF50_RS13510 PF02867 Ribonucleotide reductase, barrel domain DCF50_RS13510 PF00317 Ribonucleotide reductase, all-alpha domain DCF50_RS13510 PF03477 ATP cone domain DCF50_RS13515 PF00440 Bacterial regulatory proteins, tetR family DCF50_RS13515 PF17754 MftR C-terminal domain DCF50_RS13525 PF10371 Domain of unknown function DCF50_RS13525 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DCF50_RS13525 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DCF50_RS13525 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DCF50_RS13525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DCF50_RS13540 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS13540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS13540 PF00672 HAMP domain DCF50_RS13545 PF00072 Response regulator receiver domain DCF50_RS13545 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS13550 PF00301 Rubredoxin DCF50_RS13555 PF07729 FCD domain DCF50_RS13555 PF00392 Bacterial regulatory proteins, gntR family DCF50_RS13560 PF01471 Putative peptidoglycan binding domain DCF50_RS13560 PF07486 Cell Wall Hydrolase DCF50_RS13580 PF03741 Integral membrane protein TerC family DCF50_RS13585 PF13458 Periplasmic binding protein DCF50_RS13590 PF00270 DEAD/DEAH box helicase DCF50_RS13590 PF00271 Helicase conserved C-terminal domain DCF50_RS13595 PF00005 ABC transporter DCF50_RS13595 PF08402 TOBE domain DCF50_RS13600 PF00528 Binding-protein-dependent transport system inner membrane component DCF50_RS13610 PF12727 PBP superfamily domain DCF50_RS13610 PF12728 Helix-turn-helix domain DCF50_RS13615 PF02645 Uncharacterised protein, DegV family COG1307 DCF50_RS13625 PF00672 HAMP domain DCF50_RS13625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS13625 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS13630 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS13630 PF00072 Response regulator receiver domain DCF50_RS13635 PF00072 Response regulator receiver domain DCF50_RS13635 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS13640 PF00155 Aminotransferase class I and II DCF50_RS13645 PF13180 PDZ domain DCF50_RS13650 PF00005 ABC transporter DCF50_RS13655 PF02361 Cobalt transport protein DCF50_RS13660 PF01891 Cobalt uptake substrate-specific transmembrane region DCF50_RS13660 PF13190 PDGLE domain DCF50_RS13670 PF01966 HD domain DCF50_RS13675 PF00989 PAS fold DCF50_RS13675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS13675 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS13680 PF13193 AMP-binding enzyme C-terminal domain DCF50_RS13680 PF00550 Phosphopantetheine attachment site DCF50_RS13680 PF00668 Condensation domain DCF50_RS13680 PF00501 AMP-binding enzyme DCF50_RS13685 PF01648 4'-phosphopantetheinyl transferase superfamily DCF50_RS13690 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS13690 PF18719 ArlS sensor domain DCF50_RS13695 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS13695 PF00072 Response regulator receiver domain DCF50_RS13700 PF00889 Elongation factor TS DCF50_RS13710 PF00005 ABC transporter DCF50_RS13710 PF00664 ABC transporter transmembrane region DCF50_RS13715 PF00005 ABC transporter DCF50_RS13715 PF00664 ABC transporter transmembrane region DCF50_RS13725 PF02954 Bacterial regulatory protein, Fis family DCF50_RS13725 PF00072 Response regulator receiver domain DCF50_RS13725 PF00158 Sigma-54 interaction domain DCF50_RS13730 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS13730 PF00989 PAS fold DCF50_RS13735 PF04397 LytTr DNA-binding domain DCF50_RS13735 PF00072 Response regulator receiver domain DCF50_RS13740 PF00072 Response regulator receiver domain DCF50_RS13740 PF00990 Diguanylate cyclase, GGDEF domain DCF50_RS13745 PF01544 CorA-like Mg2+ transporter protein DCF50_RS13755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DCF50_RS13755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DCF50_RS13755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DCF50_RS13755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DCF50_RS13760 PF00342 Phosphoglucose isomerase DCF50_RS13765 PF06508 Queuosine biosynthesis protein QueC DCF50_RS13770 PF04055 Radical SAM superfamily DCF50_RS13775 PF01242 6-pyruvoyl tetrahydropterin synthase DCF50_RS13785 PF02833 DHHA2 domain DCF50_RS13785 PF01368 DHH family DCF50_RS13785 PF00571 CBS domain DCF50_RS13785 PF07085 DRTGG domain DCF50_RS13790 PF04286 Protein of unknown function (DUF445) DCF50_RS13800 PF01895 PhoU domain DCF50_RS13805 PF00005 ABC transporter DCF50_RS13810 PF00528 Binding-protein-dependent transport system inner membrane component DCF50_RS13815 PF00528 Binding-protein-dependent transport system inner membrane component DCF50_RS13820 PF00512 His Kinase A (phospho-acceptor) domain DCF50_RS13820 PF16736 Single Cache-like DCF50_RS13820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS13820 PF00989 PAS fold DCF50_RS13825 PF00072 Response regulator receiver domain DCF50_RS13825 PF00486 Transcriptional regulatory protein, C terminal DCF50_RS13830 PF12849 PBP superfamily domain DCF50_RS13835 PF13307 Helicase C-terminal domain DCF50_RS13835 PF06733 DEAD_2 DCF50_RS13840 PF02390 Putative methyltransferase DCF50_RS13845 PF00285 Citrate synthase, C-terminal domain DCF50_RS13850 PF00072 Response regulator receiver domain DCF50_RS13855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCF50_RS13855 PF02895 Signal transducing histidine kinase, homodimeric domain DCF50_RS13855 PF01584 CheW-like domain DCF50_RS13855 PF07194 P2 response regulator binding domain DCF50_RS13855 PF01627 Hpt domain DCF50_RS13860 PF01116 Fructose-bisphosphate aldolase class-II DCF50_RS13870 PF00586 AIR synthase related protein, N-terminal domain DCF50_RS13870 PF02769 AIR synthase related protein, C-terminal domain DCF50_RS13870 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DCF50_RS13890 PF08486 Stage II sporulation protein DCF50_RS13890 PF04122 Putative cell wall binding repeat 2 DCF50_RS13910 PF01668 SmpB protein DCF50_RS13920 PF03030 Inorganic H+ pyrophosphatase DCF50_RS13925 PF03840 Preprotein translocase SecG subunit DCF50_RS13930 PF00113 Enolase, C-terminal TIM barrel domain DCF50_RS13930 PF03952 Enolase, N-terminal domain DCF50_RS13935 PF01676 Metalloenzyme superfamily DCF50_RS13935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DCF50_RS13940 PF00121 Triosephosphate isomerase DCF50_RS13945 PF00162 Phosphoglycerate kinase DCF50_RS13950 PF02386 Cation transport protein DCF50_RS13955 PF02254 TrkA-N domain DCF50_RS13955 PF02080 TrkA-C domain DCF50_RS13960 PF02690 Na+/Pi-cotransporter DCF50_RS13965 PF14527 WhiA LAGLIDADG-like domain DCF50_RS13965 PF10298 WhiA N-terminal LAGLIDADG-like domain DCF50_RS13965 PF02650 WhiA C-terminal HTH domain DCF50_RS13970 PF01933 Uncharacterised protein family UPF0052 DCF50_RS13975 PF03668 P-loop ATPase protein family DCF50_RS13985 PF04055 Radical SAM superfamily DCF50_RS13985 PF02310 B12 binding domain DCF50_RS13995 PF07730 Histidine kinase DCF50_RS14000 PF00196 Bacterial regulatory proteins, luxR family DCF50_RS14000 PF00072 Response regulator receiver domain DCF50_RS14005 PF00005 ABC transporter DCF50_RS14020 PF02548 Ketopantoate hydroxymethyltransferase DCF50_RS14025 PF00005 ABC transporter DCF50_RS14025 PF17760 UvrA interaction domain DCF50_RS14025 PF17755 UvrA DNA-binding domain DCF50_RS14030 PF00271 Helicase conserved C-terminal domain DCF50_RS14030 PF02151 UvrB/uvrC motif DCF50_RS14030 PF12344 Ultra-violet resistance protein B DCF50_RS14030 PF04851 Type III restriction enzyme, res subunit DCF50_RS14030 PF17757 UvrB interaction domain DCF50_RS14040 PF03572 Peptidase family S41 DCF50_RS14040 PF13180 PDZ domain DCF50_RS14045 PF01551 Peptidase family M23 DCF50_RS14045 PF01476 LysM domain DCF50_RS14050 PF18075 FtsX extracellular domain DCF50_RS14050 PF02687 FtsX-like permease family DCF50_RS14055 PF00005 ABC transporter DCF50_RS14060 PF02780 Transketolase, C-terminal domain DCF50_RS14060 PF02779 Transketolase, pyrimidine binding domain DCF50_RS14065 PF00456 Transketolase, thiamine diphosphate binding domain DCF50_RS14070 PF03462 PCRF domain DCF50_RS14070 PF00472 RF-1 domain DCF50_RS14075 PF07517 SecA DEAD-like domain DCF50_RS14075 PF02810 SEC-C motif DCF50_RS14075 PF01043 SecA preprotein cross-linking domain DCF50_RS14075 PF07516 SecA Wing and Scaffold domain DCF50_RS14080 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DCF50_RS14080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DCF50_RS14085 PF00156 Phosphoribosyl transferase domain DCF50_RS14090 PF04851 Type III restriction enzyme, res subunit DCF50_RS14090 PF00271 Helicase conserved C-terminal domain DCF50_RS14105 PF00534 Glycosyl transferases group 1 DCF50_RS14105 PF13439 Glycosyltransferase Family 4 DCF50_RS14110 PF03808 Glycosyl transferase WecB/TagA/CpsF family DCF50_RS14120 PF12116 Stage III sporulation protein D DCF50_RS14125 PF12838 4Fe-4S dicluster domain DCF50_RS14125 PF13486 Reductive dehalogenase subunit DCF50_RS14130 PF08486 Stage II sporulation protein DCF50_RS14135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DCF50_RS14155 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS14155 PF00589 Phage integrase family DCF50_RS14160 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS14160 PF00589 Phage integrase family DCF50_RS14165 PF00589 Phage integrase family DCF50_RS14165 PF02899 Phage integrase, N-terminal SAM-like domain DCF50_RS14170 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DCF50_RS14180 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DCF50_RS14180 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DCF50_RS14185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DCF50_RS14185 PF02874 ATP synthase alpha/beta family, beta-barrel domain DCF50_RS14190 PF00231 ATP synthase DCF50_RS14195 PF02874 ATP synthase alpha/beta family, beta-barrel domain DCF50_RS14195 PF00306 ATP synthase alpha/beta chain, C terminal domain DCF50_RS14195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DCF50_RS14200 PF00213 ATP synthase delta (OSCP) subunit DCF50_RS14205 PF00430 ATP synthase B/B' CF(0) DCF50_RS14210 PF00137 ATP synthase subunit C DCF50_RS14215 PF00119 ATP synthase A chain DCF50_RS14230 PF02350 UDP-N-acetylglucosamine 2-epimerase DCF50_RS14240 PF00464 Serine hydroxymethyltransferase DCF50_RS14245 PF04260 Protein of unknown function (DUF436) DCF50_RS14250 PF02502 Ribose/Galactose Isomerase DCF50_RS14255 PF01451 Low molecular weight phosphotyrosine protein phosphatase DCF50_RS14260 PF02659 Putative manganese efflux pump DCF50_RS14265 PF01300 Telomere recombination DCF50_RS14265 PF03481 Putative GTP-binding controlling metal-binding DCF50_RS14270 PF05175 Methyltransferase small domain DCF50_RS14270 PF17827 PrmC N-terminal domain DCF50_RS14275 PF00472 RF-1 domain DCF50_RS14275 PF03462 PCRF domain DCF50_RS14280 PF07136 Protein of unknown function (DUF1385) DCF50_RS14285 PF01197 Ribosomal protein L31 DCF50_RS14290 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DCF50_RS14295 PF00923 Transaldolase/Fructose-6-phosphate aldolase DCF50_RS14305 PF00072 Response regulator receiver domain DCF50_RS14310 PF00842 Alanine racemase, C-terminal domain DCF50_RS14310 PF01168 Alanine racemase, N-terminal domain DCF50_RS14315 PF02388 FemAB family DCF50_RS14320 PF00117 Glutamine amidotransferase class-I DCF50_RS14320 PF06418 CTP synthase N-terminus DCF50_RS14325 PF03485 Arginyl tRNA synthetase N terminal domain DCF50_RS14325 PF00750 tRNA synthetases class I (R) DCF50_RS14325 PF05746 DALR anticodon binding domain DCF50_RS14330 PF14620 YpeB sporulation DCF50_RS14330 PF03413 Peptidase propeptide and YPEB domain DCF50_RS14335 PF01471 Putative peptidoglycan binding domain DCF50_RS14335 PF07486 Cell Wall Hydrolase DCF50_RS14340 PF02913 FAD linked oxidases, C-terminal domain DCF50_RS14340 PF01565 FAD binding domain DCF50_RS14345 PF00266 Aminotransferase class-V DCF50_RS14350 PF00152 tRNA synthetases class II (D, K and N) DCF50_RS14350 PF01336 OB-fold nucleic acid binding domain DCF50_RS14360 PF01170 Putative RNA methylase family UPF0020 DCF50_RS14360 PF02926 THUMP domain DCF50_RS14375 PF02371 Transposase IS116/IS110/IS902 family DCF50_RS14375 PF01548 Transposase DCF50_RS14390 PF00149 Calcineurin-like phosphoesterase DCF50_RS14395 PF16360 GTP-binding GTPase Middle Region DCF50_RS14395 PF13167 GTP-binding GTPase N-terminal DCF50_RS14395 PF01926 50S ribosome-binding GTPase DCF50_RS14400 PF01040 UbiA prenyltransferase family DCF50_RS14410 PF01969 Protein of unknown function DUF111 DCF50_RS14415 PF01043 SecA preprotein cross-linking domain DCF50_RS14415 PF07516 SecA Wing and Scaffold domain DCF50_RS14415 PF07517 SecA DEAD-like domain DCF50_RS14425 PF00672 HAMP domain DCF50_RS14425 PF17202 Single cache domain 3 DCF50_RS14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DCF50_RS14430 PF12833 Helix-turn-helix domain DCF50_RS14430 PF02311 AraC-like ligand binding domain DCF50_RS14440 PF02570 Precorrin-8X methylmutase DCF50_RS14445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCF50_RS14455 PF00202 Aminotransferase class-III DCF50_RS14460 PF00490 Delta-aminolevulinic acid dehydratase DCF50_RS14465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCF50_RS14465 PF02602 Uroporphyrinogen-III synthase HemD DCF50_RS14470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DCF50_RS14470 PF03900 Porphobilinogen deaminase, C-terminal domain DCF50_RS14475 PF02571 Precorrin-6x reductase CbiJ/CobK DCF50_RS14480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCF50_RS14485 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DCF50_RS14485 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DCF50_RS14485 PF01488 Shikimate / quinate 5-dehydrogenase DCF50_RS14495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCF50_RS14500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCF50_RS14505 PF01888 CbiD DCF50_RS14510 PF00005 ABC transporter DCF50_RS14515 PF02361 Cobalt transport protein DCF50_RS14520 PF02553 Cobalt transport protein component CbiN DCF50_RS14525 PF01891 Cobalt uptake substrate-specific transmembrane region DCF50_RS14530 PF02590 Predicted SPOUT methyltransferase DCF50_RS14545 PF13180 PDZ domain DCF50_RS14550 PF00595 PDZ domain DCF50_RS14550 PF13180 PDZ domain DCF50_RS14555 PF00753 Metallo-beta-lactamase superfamily DCF50_RS14580 PF00246 Zinc carboxypeptidase DCF50_RS14580 PF01476 LysM domain DCF50_RS14605 PF00709 Adenylosuccinate synthetase DCF50_RS14610 PF00772 DnaB-like helicase N terminal domain DCF50_RS14610 PF03796 DnaB-like helicase C terminal domain DCF50_RS14615 PF00004 ATPase family associated with various cellular activities (AAA) DCF50_RS14615 PF05362 Lon protease (S16) C-terminal proteolytic domain DCF50_RS14620 PF01281 Ribosomal protein L9, N-terminal domain DCF50_RS14620 PF03948 Ribosomal protein L9, C-terminal domain DCF50_RS14635 PF01084 Ribosomal protein S18 DCF50_RS14640 PF00436 Single-strand binding protein family DCF50_RS14645 PF01250 Ribosomal protein S6 DCF50_RS14650 PF06071 Protein of unknown function (DUF933) DCF50_RS14650 PF01926 50S ribosome-binding GTPase DCF50_RS14670 PF09105 Elongation factor SelB, winged helix DCF50_RS14670 PF09107 Elongation factor SelB, winged helix DCF50_RS14670 PF03144 Elongation factor Tu domain 2 DCF50_RS14670 PF09106 Elongation factor SelB, winged helix DCF50_RS14670 PF00009 Elongation factor Tu GTP binding domain DCF50_RS14675 PF06866 Protein of unknown function (DUF1256) DCF50_RS14685 PF17762 HTH domain found in ParB protein DCF50_RS14685 PF02195 ParB-like nuclease domain DCF50_RS14690 PF13614 AAA domain DCF50_RS14695 PF02527 rRNA small subunit methyltransferase G DCF50_RS14700 PF13932 GidA associated domain DCF50_RS14700 PF01134 Glucose inhibited division protein A DCF50_RS14705 PF12631 MnmE helical domain DCF50_RS14705 PF10396 GTP-binding protein TrmE N-terminus DCF50_RS14705 PF01926 50S ribosome-binding GTPase DCF50_RS14710 PF01424 R3H domain DCF50_RS14710 PF14804 Jag N-terminus DCF50_RS14715 PF02096 60Kd inner membrane protein DCF50_RS14720 PF01809 Putative membrane protein insertion efficiency factor DCF50_RS14725 PF00825 Ribonuclease P DCF50_RS14735 PF04002 RadC-like JAB domain DCF50_RS14765 PF04026 SpoVG