DEIMA_RS00010 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS00010 SM00760 Bacterial dnaA protein helix-turn-helix domain DEIMA_RS00015 SM00480 DNA polymerase III beta subunit DEIMA_RS00020 SM01192 DEIMA_RS00020 DEIMA_RS00020 SM01193 DEIMA_RS00020 DEIMA_RS00030 SM00363 S4 RNA-binding domain DEIMA_RS00050 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DEIMA_RS00055 SM00870 DEIMA_RS00055 DEIMA_RS00105 SM00729 Elongator protein 3, MiaB family, Radical SAM DEIMA_RS00110 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS00160 SM00487 DEAD-like helicases superfamily DEIMA_RS00160 SM00490 helicase superfamily c-terminal domain DEIMA_RS00175 SM00479 DEIMA_RS00175 DEIMA_RS00205 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS00205 SM00994 ClpX C4-type zinc finger DEIMA_RS00205 SM01086 C-terminal, D2-small domain, of ClpB protein DEIMA_RS00210 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS00210 SM00464 Found in ATP-dependent protease La (LON) DEIMA_RS00215 SM00479 DEIMA_RS00215 DEIMA_RS00220 SM00845 GatB domain DEIMA_RS00275 SM00341 Helicase and RNase D C-terminal DEIMA_RS00365 SM00267 diguanylate cyclase DEIMA_RS00400 SM00345 helix_turn_helix gluconate operon transcriptional repressor DEIMA_RS00400 SM00866 DEIMA_RS00400 DEIMA_RS00415 SM00062 Bacterial periplasmic substrate-binding proteins DEIMA_RS00435 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS00435 SM00091 PAS domain DEIMA_RS00435 SM00387 Histidine kinase-like ATPases DEIMA_RS00435 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS00440 SM00226 Low molecular weight phosphatase family DEIMA_RS00445 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DEIMA_RS00510 SM00729 Elongator protein 3, MiaB family, Radical SAM DEIMA_RS00545 SM00028 Tetratricopeptide repeats DEIMA_RS00545 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS00545 SM00267 diguanylate cyclase DEIMA_RS00550 SM00100 Cyclic nucleotide-monophosphate binding domain DEIMA_RS00565 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS00565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS00565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS00565 SM00267 diguanylate cyclase DEIMA_RS00580 SM00833 Cobalamin synthesis protein cobW C-terminal domain DEIMA_RS00610 SM00450 Rhodanese Homology Domain DEIMA_RS00625 SM00342 helix_turn_helix, arabinose operon control protein DEIMA_RS00640 SM00342 helix_turn_helix, arabinose operon control protein DEIMA_RS00665 SM00060 Fibronectin type 3 domain DEIMA_RS00665 SM00606 Cellulose Binding Domain Type IV DEIMA_RS00675 SM00448 cheY-homologous receiver domain DEIMA_RS00690 SM00387 Histidine kinase-like ATPases DEIMA_RS00690 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS00730 SM00257 Lysin motif DEIMA_RS00735 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS00735 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS00735 SM00267 diguanylate cyclase DEIMA_RS00770 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS00775 SM00710 Parallel beta-helix repeats DEIMA_RS00790 SM00984 UDP binding domain DEIMA_RS00815 SM00710 Parallel beta-helix repeats DEIMA_RS00830 SM00858 DEIMA_RS00830 DEIMA_RS00855 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS00855 SM00267 diguanylate cyclase DEIMA_RS00870 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS00870 SM00267 diguanylate cyclase DEIMA_RS00940 SM00822 DEIMA_RS00940 DEIMA_RS00955 SM00450 Rhodanese Homology Domain DEIMA_RS00955 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS00985 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS00995 SM00062 Bacterial periplasmic substrate-binding proteins DEIMA_RS01055 SM00833 Cobalamin synthesis protein cobW C-terminal domain DEIMA_RS01065 SM00327 von Willebrand factor (vWF) type A domain DEIMA_RS01065 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS01085 SM00342 helix_turn_helix, arabinose operon control protein DEIMA_RS01140 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS01160 SM00028 Tetratricopeptide repeats DEIMA_RS01160 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS01160 SM00267 diguanylate cyclase DEIMA_RS01165 SM00448 cheY-homologous receiver domain DEIMA_RS01165 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS01170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS01170 SM00387 Histidine kinase-like ATPases DEIMA_RS01170 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS01175 SM00354 helix_turn _helix lactose operon repressor DEIMA_RS01180 SM00606 Cellulose Binding Domain Type IV DEIMA_RS01195 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS01200 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS01215 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS01260 SM01007 Class II Aldolase and Adducin N-terminal domain DEIMA_RS01275 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS01290 SM00813 Alpha-L-arabinofuranosidase C-terminus DEIMA_RS01310 SM00354 helix_turn _helix lactose operon repressor DEIMA_RS01355 SM00448 cheY-homologous receiver domain DEIMA_RS01390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS01390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS01420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS01425 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS01460 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS01470 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS01470 SM00387 Histidine kinase-like ATPases DEIMA_RS01470 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS01540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS01540 SM00091 PAS domain DEIMA_RS01540 SM00387 Histidine kinase-like ATPases DEIMA_RS01550 SM00448 cheY-homologous receiver domain DEIMA_RS01555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS01555 SM00091 PAS domain DEIMA_RS01555 SM00387 Histidine kinase-like ATPases DEIMA_RS01575 SM00448 cheY-homologous receiver domain DEIMA_RS01575 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS01580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS01580 SM00387 Histidine kinase-like ATPases DEIMA_RS01580 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS01600 SM00960 Roadblock/LC7 domain DEIMA_RS01620 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS01635 SM00829 Enoylreductase DEIMA_RS01660 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS01705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS01705 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS01705 SM00091 PAS domain DEIMA_RS01705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS01710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS01710 SM00267 diguanylate cyclase DEIMA_RS01720 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS01775 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS01775 SM00091 PAS domain DEIMA_RS01775 SM00387 Histidine kinase-like ATPases DEIMA_RS01830 SM00530 Helix-turn-helix XRE-family like proteins DEIMA_RS01850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS01850 SM00387 Histidine kinase-like ATPases DEIMA_RS01850 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS01855 SM00448 cheY-homologous receiver domain DEIMA_RS01855 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS01860 SM00867 YceI-like domain DEIMA_RS01895 SM00882 Coenzyme A transferase DEIMA_RS01900 SM00882 Coenzyme A transferase DEIMA_RS02005 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS02015 SM00422 helix_turn_helix, mercury resistance DEIMA_RS02040 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DEIMA_RS02040 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DEIMA_RS02040 SM00493 DEIMA_RS02040 DEIMA_RS02045 SM00487 DEAD-like helicases superfamily DEIMA_RS02045 SM00490 helicase superfamily c-terminal domain DEIMA_RS02060 SM01043 Bacterial transcriptional activator domain DEIMA_RS02080 SM00327 von Willebrand factor (vWF) type A domain DEIMA_RS02105 SM00420 helix_turn_helix, Deoxyribose operon repressor DEIMA_RS02105 SM01134 DEIMA_RS02105 DEIMA_RS02120 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS02150 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS02150 SM00448 cheY-homologous receiver domain DEIMA_RS02170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS02205 SM00530 Helix-turn-helix XRE-family like proteins DEIMA_RS02215 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS02215 SM00448 cheY-homologous receiver domain DEIMA_RS02220 SM00387 Histidine kinase-like ATPases DEIMA_RS02315 SM00903 Flavin reductase like domain DEIMA_RS02325 SM00788 Adenylosuccinate synthetase DEIMA_RS02335 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DEIMA_RS02380 SM00829 Enoylreductase DEIMA_RS02400 SM00481 DNA polymerase alpha chain like domain DEIMA_RS02410 SM00478 endonuclease III DEIMA_RS02410 SM00525 DEIMA_RS02410 DEIMA_RS02435 SM00857 Resolvase, N terminal domain DEIMA_RS02495 SM00882 Coenzyme A transferase DEIMA_RS02500 SM00882 Coenzyme A transferase DEIMA_RS02530 SM00861 Transketolase, pyrimidine binding domain DEIMA_RS02615 SM00346 helix_turn_helix isocitrate lyase regulation DEIMA_RS02640 SM00448 cheY-homologous receiver domain DEIMA_RS02640 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS02645 SM00448 cheY-homologous receiver domain DEIMA_RS02645 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS02645 SM01043 Bacterial transcriptional activator domain DEIMA_RS02685 SM00861 Transketolase, pyrimidine binding domain DEIMA_RS02690 SM00072 Guanylate kinase homologues. DEIMA_RS02695 SM00506 Appr-1"-p processing enzyme DEIMA_RS02700 SM00478 endonuclease III DEIMA_RS02720 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DEIMA_RS02760 SM00387 Histidine kinase-like ATPases DEIMA_RS02825 SM01131 DEIMA_RS02825 DEIMA_RS02845 SM00530 Helix-turn-helix XRE-family like proteins DEIMA_RS02925 SM00955 DEIMA_RS02925 DEIMA_RS02965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS02965 SM00387 Histidine kinase-like ATPases DEIMA_RS02965 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS02970 SM00448 cheY-homologous receiver domain DEIMA_RS02970 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS03020 SM00838 Elongation factor G C-terminus DEIMA_RS03025 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS03035 SM00387 Histidine kinase-like ATPases DEIMA_RS03035 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS03040 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS03040 SM00448 cheY-homologous receiver domain DEIMA_RS03065 SM01387 DEIMA_RS03065 DEIMA_RS03075 SM00833 Cobalamin synthesis protein cobW C-terminal domain DEIMA_RS03080 SM00986 Uracil DNA glycosylase superfamily DEIMA_RS03080 SM00987 UreE urease accessory protein, C-terminal domain DEIMA_RS03105 SM00642 Alpha-amylase domain DEIMA_RS03185 SM00851 MGS-like domain DEIMA_RS03205 SM00062 Bacterial periplasmic substrate-binding proteins DEIMA_RS03225 SM00450 Rhodanese Homology Domain DEIMA_RS03290 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS03340 SM00960 Roadblock/LC7 domain DEIMA_RS03365 SM00564 beta-propeller repeat DEIMA_RS03390 SM01060 DEIMA_RS03390 DEIMA_RS03400 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS03405 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS03455 SM00327 von Willebrand factor (vWF) type A domain DEIMA_RS03480 SM00342 helix_turn_helix, arabinose operon control protein DEIMA_RS03525 SM00487 DEAD-like helicases superfamily DEIMA_RS03525 SM00490 helicase superfamily c-terminal domain DEIMA_RS03525 SM00847 Helicase associated domain (HA2) Add an annotation DEIMA_RS03535 SM00797 Allophanate hydrolase subunit 2 DEIMA_RS03540 SM00796 Allophanate hydrolase subunit 1 DEIMA_RS03560 SM00845 GatB domain DEIMA_RS03570 SM00245 tail specific protease DEIMA_RS03740 SM00028 Tetratricopeptide repeats DEIMA_RS03775 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS03790 SM00358 Double-stranded RNA binding motif DEIMA_RS03840 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DEIMA_RS03880 SM00857 Resolvase, N terminal domain DEIMA_RS03905 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS03930 SM00729 Elongator protein 3, MiaB family, Radical SAM DEIMA_RS03960 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS03965 SM00729 Elongator protein 3, MiaB family, Radical SAM DEIMA_RS04010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS04020 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04030 SM00881 CoA binding domain DEIMA_RS04045 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04130 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DEIMA_RS04155 SM00663 RNA polymerase I subunit A N-terminus DEIMA_RS04180 SM00649 Ribosomal protein L11/L12 DEIMA_RS04185 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DEIMA_RS04185 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DEIMA_RS04225 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04230 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04235 SM00960 Roadblock/LC7 domain DEIMA_RS04240 SM00960 Roadblock/LC7 domain DEIMA_RS04245 SM00960 Roadblock/LC7 domain DEIMA_RS04250 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DEIMA_RS04250 SM00493 DEIMA_RS04250 DEIMA_RS04295 SM00943 Bifunctional DNA primase/polymerase, N-terminal DEIMA_RS04385 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DEIMA_RS04430 SM00636 DEIMA_RS04430 DEIMA_RS04455 SM00507 HNH nucleases DEIMA_RS04500 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS04550 SM00387 Histidine kinase-like ATPases DEIMA_RS04550 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS04555 SM00448 cheY-homologous receiver domain DEIMA_RS04555 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS04575 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04655 SM00822 DEIMA_RS04655 DEIMA_RS04665 SM00838 Elongation factor G C-terminus DEIMA_RS04665 SM00889 Elongation factor G, domain IV DEIMA_RS04685 SM00587 ZnF_C4 abd HLH domain containing kinases domain DEIMA_RS04700 SM00327 von Willebrand factor (vWF) type A domain DEIMA_RS04725 SM00316 Ribosomal protein S1-like RNA-binding domain DEIMA_RS04725 SM00322 K homology RNA-binding domain DEIMA_RS04755 SM00905 Dihydroneopterin aldolase DEIMA_RS04765 SM00740 DEIMA_RS04765 DEIMA_RS04775 SM00267 diguanylate cyclase DEIMA_RS04780 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DEIMA_RS04815 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DEIMA_RS04850 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04850 SM00464 Found in ATP-dependent protease La (LON) DEIMA_RS04860 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS04860 SM00091 PAS domain DEIMA_RS04860 SM00267 diguanylate cyclase DEIMA_RS04870 SM00400 zinc finger DEIMA_RS04870 SM00493 DEIMA_RS04870 DEIMA_RS04875 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04915 SM00028 Tetratricopeptide repeats DEIMA_RS04920 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04945 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS04950 SM00460 Transglutaminase/protease-like homologues DEIMA_RS04970 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS05050 SM00829 Enoylreductase DEIMA_RS05090 SM00363 S4 RNA-binding domain DEIMA_RS05165 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain DEIMA_RS05175 SM00901 DEIMA_RS05175 DEIMA_RS05240 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS05260 SM01058 CarD-like/TRCF domain DEIMA_RS05270 SM00244 prohibitin homologues DEIMA_RS05280 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS05295 SM00411 bacterial (prokaryotic) histone like domain DEIMA_RS05310 SM01207 DEIMA_RS05310 DEIMA_RS05340 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS05340 SM00448 cheY-homologous receiver domain DEIMA_RS05345 SM00387 Histidine kinase-like ATPases DEIMA_RS05355 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS05385 SM00393 Putative single-stranded nucleic acids-binding domain DEIMA_RS05405 SM00448 cheY-homologous receiver domain DEIMA_RS05415 SM00829 Enoylreductase DEIMA_RS05455 SM00387 Histidine kinase-like ATPases DEIMA_RS05455 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS05460 SM00448 cheY-homologous receiver domain DEIMA_RS05460 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS05465 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS05530 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS05530 SM00448 cheY-homologous receiver domain DEIMA_RS05570 SM00861 Transketolase, pyrimidine binding domain DEIMA_RS05630 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS05685 SM00387 Histidine kinase-like ATPases DEIMA_RS05695 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS05695 SM00448 cheY-homologous receiver domain DEIMA_RS05725 SM00919 Malic enzyme, NAD binding domain DEIMA_RS05725 SM01274 DEIMA_RS05725 DEIMA_RS05765 SM00967 RNA 2'-O ribose methyltransferase substrate binding DEIMA_RS05775 SM00344 helix_turn_helix ASNC type DEIMA_RS05775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DEIMA_RS05800 SM00729 Elongator protein 3, MiaB family, Radical SAM DEIMA_RS05845 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS05920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DEIMA_RS05935 SM00822 DEIMA_RS05935 DEIMA_RS05985 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS05985 SM00962 SRP54-type protein, GTPase domain DEIMA_RS05985 SM00963 SRP54-type protein, helical bundle domain DEIMA_RS06050 SM00830 Chorismate mutase type II DEIMA_RS06060 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DEIMA_RS06060 SM00481 DNA polymerase alpha chain like domain DEIMA_RS06060 SM00483 DNA polymerase X family DEIMA_RS06075 SM00855 Phosphoglycerate mutase family DEIMA_RS06210 SM00855 Phosphoglycerate mutase family DEIMA_RS06220 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DEIMA_RS06300 SM00062 Bacterial periplasmic substrate-binding proteins DEIMA_RS06300 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DEIMA_RS06315 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS06315 SM00448 cheY-homologous receiver domain DEIMA_RS06340 SM00267 diguanylate cyclase DEIMA_RS06345 SM00028 Tetratricopeptide repeats DEIMA_RS06345 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS06355 SM00893 Electron transfer flavoprotein domain DEIMA_RS06360 SM00893 Electron transfer flavoprotein domain DEIMA_RS06375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS06405 SM00357 Cold shock protein domain DEIMA_RS06440 SM00028 Tetratricopeptide repeats DEIMA_RS06450 SM00046 Diacylglycerol kinase catalytic domain (presumed) DEIMA_RS06495 SM00116 Domain in cystathionine beta-synthase and other proteins. DEIMA_RS06495 SM01240 DEIMA_RS06495 DEIMA_RS06520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS06540 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS06540 SM00448 cheY-homologous receiver domain DEIMA_RS06570 SM00422 helix_turn_helix, mercury resistance DEIMA_RS06585 SM00220 Serine/Threonine protein kinases, catalytic domain DEIMA_RS06590 SM01004 Delta-aminolevulinic acid dehydratase DEIMA_RS06630 SM00220 Serine/Threonine protein kinases, catalytic domain DEIMA_RS06645 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS06650 SM00248 ankyrin repeats DEIMA_RS06665 SM00564 beta-propeller repeat DEIMA_RS06705 SM00448 cheY-homologous receiver domain DEIMA_RS06710 SM00357 Cold shock protein domain DEIMA_RS06740 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DEIMA_RS06740 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DEIMA_RS06745 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS06750 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS06765 SM00116 Domain in cystathionine beta-synthase and other proteins. DEIMA_RS06785 SM00855 Phosphoglycerate mutase family DEIMA_RS06790 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS06825 SM00116 Domain in cystathionine beta-synthase and other proteins. DEIMA_RS06830 SM00935 Outer membrane protein (OmpH-like) DEIMA_RS06835 SM00935 Outer membrane protein (OmpH-like) DEIMA_RS06850 SM00448 cheY-homologous receiver domain DEIMA_RS06855 SM00859 Semialdehyde dehydrogenase, NAD binding domain DEIMA_RS06930 SM00345 helix_turn_helix gluconate operon transcriptional repressor DEIMA_RS06930 SM00895 DEIMA_RS06930 DEIMA_RS06990 SM00014 Acid phosphatase homologues DEIMA_RS07020 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. DEIMA_RS07025 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS07025 SM00843 DEIMA_RS07025 DEIMA_RS07030 SM00232 JAB/MPN domain DEIMA_RS07035 SM00257 Lysin motif DEIMA_RS07050 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS07050 SM01086 C-terminal, D2-small domain, of ClpB protein DEIMA_RS07060 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS07105 SM00642 Alpha-amylase domain DEIMA_RS07155 SM00450 Rhodanese Homology Domain DEIMA_RS07195 SM00448 cheY-homologous receiver domain DEIMA_RS07200 SM00387 Histidine kinase-like ATPases DEIMA_RS07215 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS07245 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS07270 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DEIMA_RS07295 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DEIMA_RS07295 SM00475 5'-3' exonuclease DEIMA_RS07295 SM00482 DNA polymerase A domain DEIMA_RS07310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS07345 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS07345 SM00448 cheY-homologous receiver domain DEIMA_RS07360 SM00316 Ribosomal protein S1-like RNA-binding domain DEIMA_RS07400 SM00937 DEIMA_RS07400 DEIMA_RS07415 SM00840 DEIMA_RS07415 DEIMA_RS07430 SM00387 Histidine kinase-like ATPases DEIMA_RS07430 SM00433 TopoisomeraseII DEIMA_RS07500 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS07560 SM00972 Spore Coat Protein U domain DEIMA_RS07565 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS07575 SM00448 cheY-homologous receiver domain DEIMA_RS07575 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS07580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS07580 SM00387 Histidine kinase-like ATPases DEIMA_RS07580 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS07590 SM00729 Elongator protein 3, MiaB family, Radical SAM DEIMA_RS07605 SM01329 DEIMA_RS07605 DEIMA_RS07610 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS07650 SM00226 Low molecular weight phosphatase family DEIMA_RS07660 SM00917 LeuA allosteric (dimerisation) domain DEIMA_RS07685 SM01329 DEIMA_RS07685 DEIMA_RS07710 SM00670 Large family of predicted nucleotide-binding domains DEIMA_RS07715 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS07725 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS07725 SM01086 C-terminal, D2-small domain, of ClpB protein DEIMA_RS07750 SM00822 DEIMA_RS07750 DEIMA_RS07760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS07760 SM00954 Region found in RelA / SpoT proteins DEIMA_RS07770 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS07835 SM01329 DEIMA_RS07835 DEIMA_RS07870 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS07980 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS07980 SM00962 SRP54-type protein, GTPase domain DEIMA_RS07980 SM00963 SRP54-type protein, helical bundle domain DEIMA_RS08020 SM00257 Lysin motif DEIMA_RS08055 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS08055 SM00448 cheY-homologous receiver domain DEIMA_RS08060 SM00387 Histidine kinase-like ATPases DEIMA_RS08060 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS08090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DEIMA_RS08130 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS08135 SM00354 helix_turn _helix lactose operon repressor DEIMA_RS08150 SM00327 von Willebrand factor (vWF) type A domain DEIMA_RS08180 SM00564 beta-propeller repeat DEIMA_RS08205 SM00530 Helix-turn-helix XRE-family like proteins DEIMA_RS08210 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS08240 SM00062 Bacterial periplasmic substrate-binding proteins DEIMA_RS08240 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DEIMA_RS08250 SM00098 Alkaline phosphatase homologues DEIMA_RS08260 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS08315 SM00904 Riboflavin kinase DEIMA_RS08325 SM00864 Tubulin/FtsZ family, GTPase domain DEIMA_RS08325 SM00865 Tubulin/FtsZ family, C-terminal domain DEIMA_RS08330 SM00842 Cell division protein FtsA DEIMA_RS08400 SM01120 DEIMA_RS08400 DEIMA_RS08400 SM01121 DEIMA_RS08400 DEIMA_RS08430 SM00463 Small MutS-related domain DEIMA_RS08430 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DEIMA_RS08430 SM00534 ATPase domain of DNA mismatch repair MUTS family DEIMA_RS08455 SM00028 Tetratricopeptide repeats DEIMA_RS08465 SM00881 CoA binding domain DEIMA_RS08505 SM00646 DEIMA_RS08505 DEIMA_RS08555 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS08580 SM01264 DEIMA_RS08580 DEIMA_RS08625 SM00345 helix_turn_helix gluconate operon transcriptional repressor DEIMA_RS08650 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DEIMA_RS08690 SM00977 TilS substrate C-terminal domain DEIMA_RS08760 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS08760 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS08760 SM00091 PAS domain DEIMA_RS08760 SM00267 diguanylate cyclase DEIMA_RS08770 SM00267 diguanylate cyclase DEIMA_RS08775 SM00529 Helix-turn-helix diphteria tox regulatory element DEIMA_RS08775 SM00899 DEIMA_RS08775 DEIMA_RS08810 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS08825 SM00316 Ribosomal protein S1-like RNA-binding domain DEIMA_RS08840 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS08860 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS08905 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DEIMA_RS08940 SM00100 Cyclic nucleotide-monophosphate binding domain DEIMA_RS08945 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS08985 SM00838 Elongation factor G C-terminus DEIMA_RS09095 SM00642 Alpha-amylase domain DEIMA_RS09105 SM00642 Alpha-amylase domain DEIMA_RS09110 SM00642 Alpha-amylase domain DEIMA_RS09115 SM00642 Alpha-amylase domain DEIMA_RS09150 SM00357 Cold shock protein domain DEIMA_RS09150 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS09150 SM00959 Rho termination factor, N-terminal domain DEIMA_RS09155 SM00257 Lysin motif DEIMA_RS09160 SM00448 cheY-homologous receiver domain DEIMA_RS09165 SM00257 Lysin motif DEIMA_RS09185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DEIMA_RS09190 SM01059 Chloramphenicol acetyltransferase DEIMA_RS09230 SM00046 Diacylglycerol kinase catalytic domain (presumed) DEIMA_RS09240 SM00411 bacterial (prokaryotic) histone like domain DEIMA_RS09250 SM00968 SMC proteins Flexible Hinge Domain DEIMA_RS09255 SM00909 Sporulation and spore germination DEIMA_RS09310 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS09335 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS09335 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS09335 SM00091 PAS domain DEIMA_RS09335 SM00387 Histidine kinase-like ATPases DEIMA_RS09335 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS09340 SM00642 Alpha-amylase domain DEIMA_RS09380 SM00855 Phosphoglycerate mutase family DEIMA_RS09400 SM00028 Tetratricopeptide repeats DEIMA_RS09400 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS09400 SM00267 diguanylate cyclase DEIMA_RS09410 SM00465 GIY-YIG type nucleases (URI domain) DEIMA_RS09540 SM00354 helix_turn _helix lactose operon repressor DEIMA_RS09580 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS09585 SM00798 AICARFT/IMPCHase bienzyme DEIMA_RS09585 SM00851 MGS-like domain DEIMA_RS09595 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS09610 SM00062 Bacterial periplasmic substrate-binding proteins DEIMA_RS09610 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DEIMA_RS09620 SM00062 Bacterial periplasmic substrate-binding proteins DEIMA_RS09625 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS09630 SM00957 SecA DEAD-like domain DEIMA_RS09630 SM00958 SecA preprotein cross-linking domain DEIMA_RS09680 SM00420 helix_turn_helix, Deoxyribose operon repressor DEIMA_RS09680 SM01134 DEIMA_RS09680 DEIMA_RS09685 SM00091 PAS domain DEIMA_RS09685 SM00387 Histidine kinase-like ATPases DEIMA_RS09740 SM00062 Bacterial periplasmic substrate-binding proteins DEIMA_RS09750 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS09755 SM00954 Region found in RelA / SpoT proteins DEIMA_RS09760 SM01018 B12 binding domain DEIMA_RS09775 SM00836 DALR anticodon binding domain DEIMA_RS09775 SM01016 Arginyl tRNA synthetase N terminal dom DEIMA_RS09815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DEIMA_RS09815 SM00292 breast cancer carboxy-terminal domain DEIMA_RS09815 SM00532 Ligase N family DEIMA_RS09835 SM00014 Acid phosphatase homologues DEIMA_RS09840 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS09910 SM00822 DEIMA_RS09910 DEIMA_RS09980 SM00344 helix_turn_helix ASNC type DEIMA_RS10015 SM00100 Cyclic nucleotide-monophosphate binding domain DEIMA_RS10015 SM00419 helix_turn_helix, cAMP Regulatory protein DEIMA_RS10050 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS10060 SM00881 CoA binding domain DEIMA_RS10080 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS10130 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS10130 SM00091 PAS domain DEIMA_RS10130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS10240 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS10265 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS10270 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS10300 SM01209 DEIMA_RS10300 DEIMA_RS10300 SM01210 DEIMA_RS10300 DEIMA_RS10310 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS10390 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS10395 SM00267 diguanylate cyclase DEIMA_RS10405 SM00387 Histidine kinase-like ATPases DEIMA_RS10405 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS10475 SM00363 S4 RNA-binding domain DEIMA_RS10490 SM00344 helix_turn_helix ASNC type DEIMA_RS10495 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DEIMA_RS10495 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DEIMA_RS10555 SM00855 Phosphoglycerate mutase family DEIMA_RS10575 SM00642 Alpha-amylase domain DEIMA_RS10625 SM00316 Ribosomal protein S1-like RNA-binding domain DEIMA_RS10625 SM00357 Cold shock protein domain DEIMA_RS10625 SM00955 DEIMA_RS10625 DEIMA_RS10645 SM00878 Biotin carboxylase C-terminal domain DEIMA_RS10655 SM00841 Elongation factor P, C-terminal DEIMA_RS10655 SM01185 DEIMA_RS10655 DEIMA_RS10675 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DEIMA_RS10680 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DEIMA_RS10685 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS10685 SM00267 diguanylate cyclase DEIMA_RS10760 SM00422 helix_turn_helix, mercury resistance DEIMA_RS10810 SM00478 endonuclease III DEIMA_RS10855 SM00354 helix_turn _helix lactose operon repressor DEIMA_RS10860 SM00487 DEAD-like helicases superfamily DEIMA_RS10860 SM00490 helicase superfamily c-terminal domain DEIMA_RS10905 SM00327 von Willebrand factor (vWF) type A domain DEIMA_RS10940 SM00852 Probable molybdopterin binding domain DEIMA_RS11000 SM00822 DEIMA_RS11000 DEIMA_RS11020 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS11030 SM01005 Alanine racemase, C-terminal domain DEIMA_RS11040 SM00422 helix_turn_helix, mercury resistance DEIMA_RS11040 SM00871 Bacterial transcription activator, effector binding domain DEIMA_RS11095 SM00861 Transketolase, pyrimidine binding domain DEIMA_RS11105 SM00342 helix_turn_helix, arabinose operon control protein DEIMA_RS11165 SM00341 Helicase and RNase D C-terminal DEIMA_RS11165 SM00487 DEAD-like helicases superfamily DEIMA_RS11165 SM00490 helicase superfamily c-terminal domain DEIMA_RS11165 SM00956 DEIMA_RS11165 DEIMA_RS11175 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS11185 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS11185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS11185 SM00387 Histidine kinase-like ATPases DEIMA_RS11185 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS11185 SM00448 cheY-homologous receiver domain DEIMA_RS11190 SM00138 Methyltransferase, chemotaxis proteins DEIMA_RS11195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS11195 SM00091 PAS domain DEIMA_RS11195 SM00387 Histidine kinase-like ATPases DEIMA_RS11195 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS11195 SM00448 cheY-homologous receiver domain DEIMA_RS11215 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS11215 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS11215 SM00091 PAS domain DEIMA_RS11215 SM00387 Histidine kinase-like ATPases DEIMA_RS11215 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS11225 SM00257 Lysin motif DEIMA_RS11240 SM00986 Uracil DNA glycosylase superfamily DEIMA_RS11240 SM00987 UreE urease accessory protein, C-terminal domain DEIMA_RS11250 SM00257 Lysin motif DEIMA_RS11265 SM00769 Water Stress and Hypersensitive response DEIMA_RS11285 SM00646 DEIMA_RS11285 DEIMA_RS11295 SM00729 Elongator protein 3, MiaB family, Radical SAM DEIMA_RS11315 SM00829 Enoylreductase DEIMA_RS11325 SM00248 ankyrin repeats DEIMA_RS11355 SM00020 Trypsin-like serine protease DEIMA_RS11410 SM00271 DnaJ molecular chaperone homology domain DEIMA_RS11425 SM01400 DEIMA_RS11425 DEIMA_RS11440 SM00642 Alpha-amylase domain DEIMA_RS11460 SM00829 Enoylreductase DEIMA_RS11520 SM00091 PAS domain DEIMA_RS11520 SM00267 diguanylate cyclase DEIMA_RS11550 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS11550 SM00245 tail specific protease DEIMA_RS11570 SM00046 Diacylglycerol kinase catalytic domain (presumed) DEIMA_RS11575 SM00481 DNA polymerase alpha chain like domain DEIMA_RS11605 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS11625 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS11655 SM00642 Alpha-amylase domain DEIMA_RS11690 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS11710 SM00244 prohibitin homologues DEIMA_RS11725 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DEIMA_RS11725 SM01232 DEIMA_RS11725 DEIMA_RS11740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS11775 SM00387 Histidine kinase-like ATPases DEIMA_RS11775 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS11775 SM00448 cheY-homologous receiver domain DEIMA_RS11810 SM00116 Domain in cystathionine beta-synthase and other proteins. DEIMA_RS11810 SM01091 Transporter associated domain DEIMA_RS11845 SM00487 DEAD-like helicases superfamily DEIMA_RS11845 SM00490 helicase superfamily c-terminal domain DEIMA_RS11860 SM00487 DEAD-like helicases superfamily DEIMA_RS11860 SM00490 helicase superfamily c-terminal domain DEIMA_RS11860 SM00982 DEIMA_RS11860 DEIMA_RS11860 SM01058 CarD-like/TRCF domain DEIMA_RS11885 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DEIMA_RS11905 SM01133 DEIMA_RS11905 DEIMA_RS11945 SM01350 DEIMA_RS11945 DEIMA_RS12000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS12000 SM00245 tail specific protease DEIMA_RS12005 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12040 SM00464 Found in ATP-dependent protease La (LON) DEIMA_RS12045 SM00434 DNA Topoisomerase IV DEIMA_RS12050 SM00419 helix_turn_helix, cAMP Regulatory protein DEIMA_RS12060 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS12060 SM00091 PAS domain DEIMA_RS12060 SM00267 diguanylate cyclase DEIMA_RS12075 SM01230 DEIMA_RS12075 DEIMA_RS12080 SM01230 DEIMA_RS12080 DEIMA_RS12100 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12105 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12175 SM00829 Enoylreductase DEIMA_RS12195 SM00028 Tetratricopeptide repeats DEIMA_RS12195 SM00267 diguanylate cyclase DEIMA_RS12200 SM00937 DEIMA_RS12200 DEIMA_RS12255 SM00478 endonuclease III DEIMA_RS12315 SM00345 helix_turn_helix gluconate operon transcriptional repressor DEIMA_RS12405 SM00636 DEIMA_RS12405 DEIMA_RS12405 SM00637 DEIMA_RS12405 DEIMA_RS12435 SM00422 helix_turn_helix, mercury resistance DEIMA_RS12440 SM00100 Cyclic nucleotide-monophosphate binding domain DEIMA_RS12440 SM00419 helix_turn_helix, cAMP Regulatory protein DEIMA_RS12485 SM00235 Zinc-dependent metalloprotease DEIMA_RS12500 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12530 SM00487 DEAD-like helicases superfamily DEIMA_RS12530 SM00490 helicase superfamily c-terminal domain DEIMA_RS12550 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS12565 SM00448 cheY-homologous receiver domain DEIMA_RS12570 SM00387 Histidine kinase-like ATPases DEIMA_RS12570 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS12580 SM00853 MutL C terminal dimerisation domain DEIMA_RS12580 SM01340 DEIMA_RS12580 DEIMA_RS12585 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DEIMA_RS12585 SM00534 ATPase domain of DNA mismatch repair MUTS family DEIMA_RS12680 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS12690 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12710 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12725 SM00271 DnaJ molecular chaperone homology domain DEIMA_RS12735 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12740 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12770 SM00882 Coenzyme A transferase DEIMA_RS12775 SM00882 Coenzyme A transferase DEIMA_RS12780 SM01043 Bacterial transcriptional activator domain DEIMA_RS12855 SM00422 helix_turn_helix, mercury resistance DEIMA_RS12870 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS12870 SM01086 C-terminal, D2-small domain, of ClpB protein DEIMA_RS12925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS12925 SM00387 Histidine kinase-like ATPases DEIMA_RS12930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS12930 SM00267 diguanylate cyclase DEIMA_RS12965 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS12965 SM00267 diguanylate cyclase DEIMA_RS12995 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS13030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS13070 SM00419 helix_turn_helix, cAMP Regulatory protein DEIMA_RS13085 SM00998 Adenylosuccinate lyase C-terminus DEIMA_RS13105 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS13115 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DEIMA_RS13150 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS13180 SM00257 Lysin motif DEIMA_RS13180 SM00749 bacterial OsmY and nodulation domain DEIMA_RS13200 SM00448 cheY-homologous receiver domain DEIMA_RS13205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS13205 SM00387 Histidine kinase-like ATPases DEIMA_RS13205 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS13210 SM01207 DEIMA_RS13210 DEIMA_RS13275 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS13310 SM00028 Tetratricopeptide repeats DEIMA_RS13335 SM00882 Coenzyme A transferase DEIMA_RS13345 SM00882 Coenzyme A transferase DEIMA_RS13380 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS13405 SM00342 helix_turn_helix, arabinose operon control protein DEIMA_RS13445 SM01207 DEIMA_RS13445 DEIMA_RS13450 SM00859 Semialdehyde dehydrogenase, NAD binding domain DEIMA_RS13465 SM00631 DEIMA_RS13465 DEIMA_RS13480 SM00859 Semialdehyde dehydrogenase, NAD binding domain DEIMA_RS13540 SM00883 Chaperonin 10 Kd subunit DEIMA_RS13545 SM00267 diguanylate cyclase DEIMA_RS13590 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DEIMA_RS13590 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DEIMA_RS13590 SM00493 DEIMA_RS13590 DEIMA_RS13630 SM00028 Tetratricopeptide repeats DEIMA_RS13635 SM01058 CarD-like/TRCF domain DEIMA_RS13640 SM00650 Ribosomal RNA adenine dimethylases DEIMA_RS13660 SM00946 Prolyl-tRNA synthetase, C-terminal DEIMA_RS13670 SM00752 Horizontally Transferred TransMembrane Domain DEIMA_RS13690 SM01043 Bacterial transcriptional activator domain DEIMA_RS13695 SM00642 Alpha-amylase domain DEIMA_RS13755 SM00642 Alpha-amylase domain DEIMA_RS13785 SM00829 Enoylreductase DEIMA_RS13800 SM00354 helix_turn _helix lactose operon repressor DEIMA_RS13815 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS13880 SM00938 Nitrogen regulatory protein P-II DEIMA_RS13920 SM00220 Serine/Threonine protein kinases, catalytic domain DEIMA_RS13940 SM01211 DEIMA_RS13940 DEIMA_RS13980 SM00749 bacterial OsmY and nodulation domain DEIMA_RS13995 SM00861 Transketolase, pyrimidine binding domain DEIMA_RS14035 SM00729 Elongator protein 3, MiaB family, Radical SAM DEIMA_RS14040 SM00345 helix_turn_helix gluconate operon transcriptional repressor DEIMA_RS14040 SM00866 DEIMA_RS14040 DEIMA_RS14145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS14170 SM00100 Cyclic nucleotide-monophosphate binding domain DEIMA_RS14190 SM00642 Alpha-amylase domain DEIMA_RS14195 SM00421 helix_turn_helix, Lux Regulon DEIMA_RS14195 SM00448 cheY-homologous receiver domain DEIMA_RS14240 SM00530 Helix-turn-helix XRE-family like proteins DEIMA_RS14250 SM00947 Carbonic anhydrase DEIMA_RS14270 SM00852 Probable molybdopterin binding domain DEIMA_RS14280 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS14285 SM00322 K homology RNA-binding domain DEIMA_RS14285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS14295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS14295 SM00245 tail specific protease DEIMA_RS14330 SM00450 Rhodanese Homology Domain DEIMA_RS14370 SM00090 RIO-like kinase DEIMA_RS14425 SM00448 cheY-homologous receiver domain DEIMA_RS14425 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS14430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS14430 SM00387 Histidine kinase-like ATPases DEIMA_RS14430 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS14540 SM00387 Histidine kinase-like ATPases DEIMA_RS14540 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS14545 SM00704 CDGSH-type zinc finger. Function unknown. DEIMA_RS14570 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS14610 SM00662 RNA polymerases D DEIMA_RS14615 SM00363 S4 RNA-binding domain DEIMA_RS14615 SM01390 DEIMA_RS14615 DEIMA_RS14690 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DEIMA_RS14695 SM01374 DEIMA_RS14695 DEIMA_RS14715 SM00322 K homology RNA-binding domain DEIMA_RS14730 SM01382 DEIMA_RS14730 DEIMA_RS14730 SM01383 DEIMA_RS14730 DEIMA_RS14750 SM01403 DEIMA_RS14750 DEIMA_RS14765 SM00838 Elongation factor G C-terminus DEIMA_RS14765 SM00889 Elongation factor G, domain IV DEIMA_RS14840 SM00327 von Willebrand factor (vWF) type A domain DEIMA_RS14975 SM00960 Roadblock/LC7 domain DEIMA_RS15035 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS15055 SM00478 endonuclease III DEIMA_RS15060 SM00100 Cyclic nucleotide-monophosphate binding domain DEIMA_RS15060 SM00419 helix_turn_helix, cAMP Regulatory protein DEIMA_RS15070 SM00487 DEAD-like helicases superfamily DEIMA_RS15070 SM00490 helicase superfamily c-terminal domain DEIMA_RS15120 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS15125 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS15130 SM00563 Phosphate acyltransferases DEIMA_RS15150 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS15155 SM00220 Serine/Threonine protein kinases, catalytic domain DEIMA_RS15165 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS15230 SM00240 Forkhead associated domain DEIMA_RS15235 SM00240 Forkhead associated domain DEIMA_RS15250 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DEIMA_RS15260 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS15290 SM00903 Flavin reductase like domain DEIMA_RS15340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS15360 SM01022 DEIMA_RS15360 DEIMA_RS15385 SM00530 Helix-turn-helix XRE-family like proteins DEIMA_RS15400 SM00562 DEIMA_RS15400 DEIMA_RS15470 SM00646 DEIMA_RS15470 DEIMA_RS15565 SM01409 DEIMA_RS15565 DEIMA_RS15635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS15660 SM00028 Tetratricopeptide repeats DEIMA_RS15660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS15680 SM00345 helix_turn_helix gluconate operon transcriptional repressor DEIMA_RS15680 SM00895 DEIMA_RS15680 DEIMA_RS15685 SM00636 DEIMA_RS15685 DEIMA_RS15685 SM00637 DEIMA_RS15685 DEIMA_RS15750 SM01043 Bacterial transcriptional activator domain DEIMA_RS15770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS15770 SM00387 Histidine kinase-like ATPases DEIMA_RS15770 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS15775 SM00448 cheY-homologous receiver domain DEIMA_RS15805 SM00422 helix_turn_helix, mercury resistance DEIMA_RS15825 SM01043 Bacterial transcriptional activator domain DEIMA_RS15835 SM00487 DEAD-like helicases superfamily DEIMA_RS15835 SM00490 helicase superfamily c-terminal domain DEIMA_RS15845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS15845 SM00267 diguanylate cyclase DEIMA_RS15880 SM01001 AIR carboxylase DEIMA_RS15900 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS15985 SM00563 Phosphate acyltransferases DEIMA_RS16005 SM00732 Likely ribonuclease with RNase H fold. DEIMA_RS16015 SM00028 Tetratricopeptide repeats DEIMA_RS16015 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS16015 SM00267 diguanylate cyclase DEIMA_RS16030 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DEIMA_RS16070 SM00825 Beta-ketoacyl synthase DEIMA_RS16075 SM00823 Phosphopantetheine attachment site DEIMA_RS16080 SM00822 DEIMA_RS16080 DEIMA_RS16085 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DEIMA_RS16095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DEIMA_RS16120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS16215 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS16215 SM01027 Beta-Casp domain DEIMA_RS16285 SM00387 Histidine kinase-like ATPases DEIMA_RS16290 SM00448 cheY-homologous receiver domain DEIMA_RS16290 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS16300 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS16305 SM00382 ATPases associated with a variety of cellular activities DEIMA_RS16340 SM00563 Phosphate acyltransferases DEIMA_RS16380 SM00852 Probable molybdopterin binding domain DEIMA_RS16395 SM00479 DEIMA_RS16395 DEIMA_RS16425 SM00822 DEIMA_RS16425 DEIMA_RS16460 SM00331 Sigma factor PP2C-like phosphatases DEIMA_RS16460 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DEIMA_RS16480 SM00873 B3/4 domain DEIMA_RS16480 SM00874 tRNA synthetase B5 domain DEIMA_RS16480 SM00896 Ferredoxin-fold anticodon binding domain DEIMA_RS16510 SM00448 cheY-homologous receiver domain DEIMA_RS16515 SM00448 cheY-homologous receiver domain DEIMA_RS16515 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS16520 SM00849 Metallo-beta-lactamase superfamily DEIMA_RS16530 SM00470 ParB-like nuclease domain DEIMA_RS16545 SM01228 DEIMA_RS16545 DEIMA_RS16560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16570 SM00267 diguanylate cyclase DEIMA_RS16580 SM00387 Histidine kinase-like ATPases DEIMA_RS16580 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS16585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16585 SM00267 diguanylate cyclase DEIMA_RS16590 SM00387 Histidine kinase-like ATPases DEIMA_RS16590 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS16610 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS16625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16625 SM00267 diguanylate cyclase DEIMA_RS16630 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16630 SM00862 Transcriptional regulatory protein, C terminal DEIMA_RS16650 SM00267 diguanylate cyclase DEIMA_RS16650 SM00448 cheY-homologous receiver domain DEIMA_RS16670 SM00028 Tetratricopeptide repeats DEIMA_RS16670 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS16670 SM00267 diguanylate cyclase DEIMA_RS16680 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16680 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS16680 SM00091 PAS domain DEIMA_RS16680 SM00387 Histidine kinase-like ATPases DEIMA_RS16680 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS16690 SM00387 Histidine kinase-like ATPases DEIMA_RS16690 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS16690 SM00448 cheY-homologous receiver domain DEIMA_RS16715 SM00267 diguanylate cyclase DEIMA_RS16785 SM00637 DEIMA_RS16785 DEIMA_RS16790 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16790 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS16790 SM00091 PAS domain DEIMA_RS16790 SM00267 diguanylate cyclase DEIMA_RS16795 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS16805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16805 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS16805 SM00091 PAS domain DEIMA_RS16805 SM00387 Histidine kinase-like ATPases DEIMA_RS16805 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS16810 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS16810 SM00267 diguanylate cyclase DEIMA_RS16810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS16820 SM00347 helix_turn_helix multiple antibiotic resistance protein DEIMA_RS16825 SM01225 DEIMA_RS16825 DEIMA_RS16845 SM00028 Tetratricopeptide repeats DEIMA_RS16845 SM00267 diguanylate cyclase DEIMA_RS16860 SM00267 diguanylate cyclase DEIMA_RS16860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DEIMA_RS16865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16865 SM00091 PAS domain DEIMA_RS16865 SM00387 Histidine kinase-like ATPases DEIMA_RS16865 SM00388 His Kinase A (phosphoacceptor) domain DEIMA_RS16890 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS16890 SM00267 diguanylate cyclase DEIMA_RS16910 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS16910 SM00267 diguanylate cyclase DEIMA_RS16915 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16915 SM00267 diguanylate cyclase DEIMA_RS16920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16920 SM00267 diguanylate cyclase DEIMA_RS16920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS16925 SM00091 PAS domain DEIMA_RS16925 SM00267 diguanylate cyclase DEIMA_RS16935 SM00046 Diacylglycerol kinase catalytic domain (presumed) DEIMA_RS16940 SM00028 Tetratricopeptide repeats DEIMA_RS16940 SM00267 diguanylate cyclase DEIMA_RS16950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16970 SM00267 diguanylate cyclase DEIMA_RS16975 SM00267 diguanylate cyclase DEIMA_RS16985 SM00267 diguanylate cyclase DEIMA_RS16990 SM00267 diguanylate cyclase DEIMA_RS16995 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS16995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DEIMA_RS16995 SM00091 PAS domain DEIMA_RS16995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS17025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DEIMA_RS17025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DEIMA_RS17050 SM00387 Histidine kinase-like ATPases DEIMA_RS17075 SM00267 diguanylate cyclase DEIMA_RS17085 SM00052 Putative diguanylate phosphodiesterase DEIMA_RS17085 SM00267 diguanylate cyclase DEIMA_RS17125 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins