         eno    4568 ..    4613 + -10.3  -3.05963   TAACGGGAAAACACA GGCGGCGGACGCTGGA-AGACC GAG GAACAGTCCAGCTTTCGCCGCC TCTTCAGATGCAGCT  62 38
         pyk    6148 ..    6188 +  -6.9  -5.24129   CCTGAAGCTTAAAGC CCTGACTTGCC-CTGACC ACGAAC GGTCATCGGCAGGTCAGA  TTTTTTATCCACAGG  88 41
QR90_RS00030 NONE
QR90_RS00035 NONE
QR90_RS00040    9794 ..    9809 +  -7.5   -3.1372   AAGCAATAAAAAAAT              CCGCC TCAATC GGCGG               TGTTGATAAAAACTA  56 209
         efp   12045 ..   12072 + -14.8   -5.5112   AGGGATGACTCTGAA        GCTGCCTCCGCC TGCG GGTGGGGGCGGC         TTTTTTGTTGATGGG 100 40
QR90_RS00060   12689 ..   12709 +  -6.1   -3.1241   TCAGTCTTCCTTAAA            CTTGAGCGT ATG GCACTCAAG            TCTATTGACTCTAAT  51 77
        dnaK   14740 ..   14775 + -14.1  -4.43877   CCGCACAGTCTCGAT    CAGGGAGAGGACGGCC CACCC GGCC-TCCTCTCCCTC    TTTCTTTGAACCTTG 100 49
QR90_RS00070 NONE
QR90_RS00075 NONE
QR90_RS00080   16895 ..   16932 + -18.5  -2.68942   AGGAATTCTCAAAAC   CGGGATGGGGAGGCGGA TTGC TCTGCTTCCCCATCCCC    CTTATGTGCCCCCGT  86 39
QR90_RS00115   21957 ..   21975 +    -3  -3.81137   GGTCGCTGGTTCGAA             TCCAGTCG CCT CGACCAGA             TTTCCCTGTTTCCCA  54 9
QR90_RS00120   22095 ..   22111 +  -9.4  -4.24002   CCAGACCCTGTGAAG              GCTCCC TCTGC GGGAGC              TTTTGCCCTTTCGGG  79 37
QR90_RS00125   22239 ..   22271 + -10.5  -5.28983   CCGTCCAGAACGGCA      AGCGAAGAGGCCTGC AGT GTGCGCCTCTTCGCC      TTTTTATCTTTTGCG 100 52
QR90_RS00175   33309 ..   33324 + -10.4  -5.15634   GATGGTCCACTCACG              CCACCC TGCG GGGTGG               TTTTTTCGTGAACTG 100 63
QR90_RS00180   34589 ..   34607 +  -2.2  -2.87132   TGGAGCGAGTTCACC             CAGTGCCC GAG GGGCGACG             TGTCTCACGGCGGGG  40 64
QR90_RS00185 NONE
QR90_RS00190   36931 ..   36942 +  -3.6  -3.59738   GTCCAGAATCCTGGT                GCTG ATGG CGGC                 TTTGCCGATGTCGTG  51 517
QR90_RS00200 NONE
QR90_RS00205   41490 ..   41519 + -12.1  -3.53012   CGCGTTTGGTGACCT       CTGGCACCAGCCA GAAC TGGCTGGCGCCAC        TTTCAGGACAGACAA  73 460
QR90_RS00225 NONE
QR90_RS00235   46937 ..   46962 +  -3.2  -3.28924   TGGGCAGCCCGCCGT         TCTC-GGGCAC GGTCA GTGCCCAGCGG         TTGTCGCCGCGCGTG  47 290
QR90_RS00245   49467 ..   49500 +  -5.2  -2.71364   AAACGCCTGAACATG    C-CGGGGCCGCCTGCC ATCT GG-GGGCGGCGCTGCG     TCATTCGGCGGATAC  44 39
QR90_RS00250   50334 ..   50344 +  -2.4  -3.84451   ACCACGTAGAATCCT                 CCGC ATG GCCG                 TTTCCGTTTCCGGGC  54 32
QR90_RS00255   51475 ..   51489 +  -2.8  -4.06491   CGTGGAGTGTGGACA               TCGG AGCTGTC CCGA               TTTCTATCGCGTTAC  58 155
QR90_RS00260   52643 ..   52655 +  -4.7  -3.28712   CCGACTCGTCTGTGT                CCCAG CGT CCGGG                TTGTCCAGGGGCGAC  50 49
QR90_RS00265   53563 ..   53580 +  -3.3  -3.05384   ACCGGGCTGGGGGTC             CGGCGACG GAG CGA-GCCG             TTCCCTCCCACCCCG  43 71
QR90_RS00270 NONE
QR90_RS00275   56297 ..   56330 + -18.3  -2.72043   AAATCGCAAATGGGA     GAGAGCCGCCTGA CAGGAAGT TCAGGCGGCTCTC      GTTTCCCGGCAGCTT  86 80
QR90_RS00295   58778 ..   58800 +  -8.4  -5.33921   AGAGCAGCAAAGTGG           GGTCGTGATC GCT GATTGCGGCC           TTTTTTCATTCCTTT 100 40
QR90_RS18215   59887 ..   59908 +  -8.7   -4.8622   CAACTCAGTCCTGGA           CGCGCAC GAAGTCGG GTGCGCG            TTTTTCCTTGAAAGC  90 70
        ruvX NONE
QR90_RS17455 NONE
QR90_RS00315 NONE
QR90_RS00320 NONE
QR90_RS00325   65349 ..   65363 +  -4.2  -3.57144   CACGCCTGCCCAGAC               GTGGAG GCT CTACAC               TTTCCCCATGCAGGC  53 66
QR90_RS00330   67095 ..   67110 +  -4.6  -2.79796   GGTCCTCTCCACTTT              CCTGCG TGGC CTCAGG               TGTGCTACAGTCGCA  44 43
        rpmB   67475 ..   67505 +   -27   -4.4891   AGTTCAACTCAACGG       CGCGCCCCCTTCCA TCG TGGAAGGGGGCGCG       TTTTGTGGTCCTGCG 100 46
QR90_RS00345 NONE
QR90_RS00350 NONE
         rrf   72008 ..   72027 + -13.6  -4.08767   TTTCTTTTCCCTTCC            CATGCGCC CCTC GGCGCATG             TTTTGCGGGAGTAGC  90 44
QR90_RS00360   72112 ..   72134 + -14.8  -5.80248   CTCCCGCTCCACCCC           ACCCCCTCCG CCC CGGAGGGGGC           TTTTTTTGTGTGTTG 100 30
         tgt   73505 ..   73521 +  -5.1  -3.22086   AATTTATCGGGTTCT              CAGGG TTGACCC CCCTG              TCTTCATGCTTGTAT  48 105
QR90_RS00370   77160 ..   77178 + -13.1  -4.84527   CCTGTTTCCTGAAAG             CCCCCGC CGAGT GCGGGGG             TTTTTCGTGTGTCGG 100 77
QR90_RS00375 NONE
QR90_RS00380   79741 ..   79775 +  -4.9  -3.85698   ATGGCGAAGGTCAGC    GCCAGCCGTCCCTG CACGGGGC CAGGATCGGC-GGC     TTTCTGGAACACCCG  60 323
QR90_RS00390   80331 ..   80358 + -14.2  -5.58454   GCATCACACCCTTGA        GGAGGAACGCCG TTGC TGGTGTTCCTCC         TTTTTTTGGTCTGAG 100 51
QR90_RS00395   81467 ..   81483 +  -9.3  -5.52384   GTCTCACTCTCCTAT              CACCCCC GTC GGGGGGG              TTTTTTTGGTCAGCA 100 79
QR90_RS00400 NONE
QR90_RS00405   84481 ..   84509 + -13.1  -3.88291   GTAAACCTCACCCAT        GCGCGCCCTGC CTTCTGT GTGGGGCGCGC        TTTCTCGCAATACTC  83 37
QR90_RS00410 NONE
QR90_RS00415 NONE
QR90_RS00420   96178 ..   96210 + -19.1  -3.61764   CATCCCACTACTGAT      CGCGCCGCCCACCTT CTT ATGGTGGGCGGCGCC      TTTCGCCCTTCATCC 100 46
QR90_RS00425   97162 ..   97195 +  -7.4  -3.78775   GGCCGGAAACGCCCG    CGCCG-CTGG-CCGAG TAGG CACGGGTCAGGCGGCG     TTTCATCCTCACCAC  65 9
QR90_RS00445  102711 ..  102736 + -14.7  -3.05268   CGCAGGAAAACGCAG         GGGGCCGGG TGATCTAT CCCGGCCCC          TGTTCCGGCTAGTTC  78 42
QR90_RS00455  104813 ..  104839 +  -6.5  -3.57144   CACTCAAGTCTAGAA         GGGGCGAAGTG CGCCC CAATTCCCCCC         TTTCCCCCTGGAGGA  59 100
        ftsH  106750 ..  106769 + -12.1  -4.77036   CCTTCCAGAACAAAG            CCCCCGC CGAGAC GCGGGGG             TTTTTCGTGCTCGCC 100 46
QR90_RS00495 NONE
QR90_RS00500  112238 ..  112261 +  -7.4  -3.53811   GTCAGGGCAGCCGTA          GCGCCCGGC AGTTCTC GCCGGG-GC          TTTCGGGCGCGTCCG  62 82
QR90_RS00510 NONE
QR90_RS00515 NONE
QR90_RS00520  114512 ..  114543 +  -4.2  -4.08767   CCGCTGCGGAGGCCT      TCGCCCTCCCGCAT TACG AGGCAGCGGGGCGG       TTTTACCACAATGCC  61 55
QR90_RS00525  115083 ..  115103 +  -9.6  -3.84389   TGGGGCATCAAAAAA            GCCGGAGC ATCAC GCCCCGGC            TTCTCTTCTTCCCTA  74 70
QR90_RS00540 NONE
QR90_RS18220 NONE
QR90_RS18225 NONE
QR90_RS00555 NONE
QR90_RS16550 NONE
QR90_RS00565  121536 ..  121579 + -15.3  -2.52543   TGCCGGCGCCCCTGG CTG-CGGGCCGCGCCCCAGGT GTCG GTCAGGGG-GCGGCCCGGCAG TGGGTTGGGCAGGCT  69 340
QR90_RS00575 NONE
QR90_RS00580  124426 ..  124475 + -16.4  -2.71364   CAGCTCTCCAAGAAT CTCCGC-CGTGTGCTGC-CCCAGC GTGG GCGGGGCGCGGCGCACGGGCGGCG TCCTTCCCCCGATGG  81 77
QR90_RS00595  128878 ..  128892 +  -3.4  -4.85545   CCTGCTCCAGCGCGT               TCACGC GGC GCGAGG               TTTTCTTGATTTCCT  81 255
        rpmI NONE
        rplT  141229 ..  141254 + -19.7  -5.02606   TCCGTCCTGAAGAAA         GCGCCGCCTCC TGAT GGGGGCGGCGC          TTTTGTTGTTTCGTC 100 46
QR90_RS00680  143756 ..  143771 +  -2.4  -4.08767   GGACGCCACGCGCGG              GCTGGG GATT CCCGGA               TTTTGAAGACGTGCG  57 4
        recR  144508 ..  144534 +  -7.8  -3.60627   CAAGTTCCGGACTGA         GGGGCGCTGGGG GAG CTGCCGCGCTCC         TTTCGGATGACCTGC  62 26
QR90_RS00690  145208 ..  145226 + -11.7  -5.26316   CGTTCCAGAACTCTG             GGGAGGC CACGC GCCTCCC             TTTTTTCTGGCGTGG 100 45
QR90_RS00695 NONE
QR90_RS00700 NONE
QR90_RS00705 NONE
QR90_RS00710  148645 ..  148655 +  -5.4  -3.53224   TACTGATACGGATTC                 CGAT TGA ATCG                 TTTGCAAAAACGATG  53 35
QR90_RS00735  154714 ..  154759 + -14.6  -3.16564   CTCGAAACGGGCCGC TTGCGCG-CCGGGGGCCAGGG TCAGT CCCAGGCCCTCGGTCACGCGG TTCATCACGTCCAGA  77 257
QR90_RS00745  157641 ..  157673 +  -8.5  -3.78934   CGTTTCCGAATTTCG     TGCGGGCCATCTTC CTTTGT GGGGATGGCCC-CA      TTGTTGTGGCCGCCC  69 42
QR90_RS00750 NONE
QR90_RS00755  161710 ..  161724 +  -3.4  -3.21099   GCGCAGCGGCAGGCG               CTCGCG CCG CTCGGG               TTGCTCGTCGGGCAC  45 312
QR90_RS00770  164862 ..  164885 +    -3  -2.71712   CCTGACGCGAGAAGG          CCATGTTGGC CCCG GCCAGATTGG           GTTTGCCCACCACCC  40 215
QR90_RS00780 NONE
QR90_RS00785  167430 ..  167473 +  -5.9  -3.55622   CGGCCCACGCCGCTG CGCC-GCTCGCCGCTGGGGGT CAGG ATGCCCTG-GGCCAGCAGGCG TTTGCGGAAGTTGCG  57 102
        infC  171035 ..  171069 +  -9.9  -3.72576   GTAAGCCCCCAGGGC     AACGAACGGCCTGCC CGCGT GGTGGGCCGTTCGCC     TTTGATGAACCCGGC  74 37
QR90_RS00805  171450 ..  171479 +  -9.4  -4.72272   CGTTCTACAGTGCAA      CGGTGCGGTGACTG GCGA CAGTC-C-GCACCG       TTTTTCATCGGACAG  93 54
QR90_RS00820  174551 ..  174561 +    -4  -5.08824   CCTCATTAACTATTC                 GTAT CTC ATAC                 TTTTTTAAATCGCCA  82 410
QR90_RS00830  181682 ..  181715 +  -2.9  -3.72576   GTCACGCCGCTGCCC     GCGAACCGCAGTTCG GTGA CGTGCGGCGCTTCGG      TTTCGTCGGGAAAGG  53 308
QR90_RS00845  183679 ..  183694 +    -6  -2.85668   CTGTTGCAGACTCAC              CCAGGC CGCG GCCCGG               TGTGATGTGAAGCTC  48 5
QR90_RS00850  184893 ..  184928 +   -22  -3.51924   GCTCACTGCAGACAA    GAGGGAGGCCCGCA GATTCCAG TGCGGGCCTCCCTC     TTGTCTGGCTGGGAC 100 42
QR90_RS00890  189333 ..  189358 +  -7.6  -4.64598   TGCCACAGGATTGAG         GCAGCCTTCCA TTTGT TGGG-GGCTGC         TTTTTCGGGTAGTTG  83 35
QR90_RS18130  190698 ..  190713 +  -5.4  -3.04398   GGAGCTGTCCCAGTT              CGGCAGA GCG TC-GCCG              CTTTTCCCGGAGGCC  47 196
QR90_RS00905  191360 ..  191396 +   -21  -3.65902   GCATTCGGCACGTCT    TCAGAGGGAAGGGGCC ACGTC GGTCCCTTCCCTCTGG    TTTGGATGGAATACA 100 41
QR90_RS00910 NONE
QR90_RS00915  194221 ..  194243 +  -4.1  -3.15249   CGGCGTCTGACGGAA          GGGGACT-GA ACCA TCGAGCCCCC           TTCGTAAACGGTCTC  47 99
QR90_RS00920  195651 ..  195679 +  -5.2  -4.15222   CGCCGCCGCCAGCCC        GGACGGCTGAGA ACGGG TCTGAGCCGATC        TTTATTGAAACCCGT  65 16
QR90_RS00925  196855 ..  196869 +  -8.6  -3.65351   CTGCTCGGATTTCCA               GGTGTT TCC AACACC               TTTCAATCGGAGTCC  65 127
QR90_RS00950 NONE
QR90_RS00955 NONE
QR90_RS00960 NONE
QR90_RS00965  204980 ..  205023 + -25.4  -3.14132   CGCTAAGCCGCAAAA CGACAGGGGCCGCGCCGG GCGAACCA CCGGTGCGGCCTCTGTCG TTCCTACAGCGCCGA 100 35
QR90_RS01005 NONE
QR90_RS01010  213206 ..  213220 +    -7   -4.1891   CCTCCTGAAGCCGCC               AGGCCG AGT CGGCCA               TTTATATTACCCGGA  69 46
QR90_RS01015 NONE
QR90_RS01020  214181 ..  214193 +  -6.2  -3.28712   CCTGAGCTGACGGCG                GCGC AGTTG GCGC                TTCTGGCCAAGCAGC  52 31
QR90_RS18240  214803 ..  214827 +  -6.4  -3.41745   CTTCAGCTCGACGGT         GGCGCCGGC-GG CTT CCAGCTGG-GCC         TTCATCTTCTCGGCC  57 114
QR90_RS01095 NONE
QR90_RS01100  225408 ..  225441 + -11.7  -4.37991   TGGAGAGAAACAGGG     AAGAGGCCGGAAGCGC AAT GCCCT-CCGGCCTCTC     TTTTCGGTCTTTTTG  91 188
QR90_RS01110  228095 ..  228116 + -12.3  -5.02074   AACCCCCGTCCCCCG           GCCCTCTTC GTCT GGAGAGGGC            TTTTTTCACGGGTCA 100 40
QR90_RS01120 NONE
QR90_RS01125  230679 ..  230708 +  -9.3    -4.371   GGCCAGAACATCAAC       GCGCCCCACATC CTTCTTC GG-GTGGGGCGC       TTTTGCTGTGGTGCG  83 220
QR90_RS17465 NONE
QR90_RS17470  232621 ..  232635 +  -2.1  -3.59738   CCCAGACGTCCGGGT              TCAGGC CGTA GCC-GA               TTTCCAGCTCTCCTG  50 237
QR90_RS01140  233936 ..  233974 +  -2.9  -3.03159   GCTGGGCAATCCGCC   CACAGGCGAGGGGACGG CGTTT TCGTGCCCTTGCCCGCA   TCTTCCCCACGTTCC  43 244
QR90_RS01145  235225 ..  235239 +  -8.6  -3.65351   CCCCTCGGATTTTCA               GGTGTT TTC AACACC               TTTCAATCGGAGTCC  65 402
QR90_RS01150  236807 ..  236838 +  -3.6  -3.54543   GCCGCAAACGTCTGC      GTGCGCTGCGACTC GCTG GACTGGTAGCGCAG       TTTCCCCGGCTCGGT  51 286
        paaZ  239574 ..  239607 + -10.3  -4.39998   GTGTTGTCTCTGGAG     GAGTAGCAAACAGGG GCGA CTCTGCTTGCTACGC      TTTCTTCTATGCCTA  95 48
QR90_RS01165 NONE
QR90_RS01170  240252 ..  240263 +  -3.6  -3.14463   AGATGGACCGCCGCT                GGCG CAGG TGCC                 TTCCTCCGAACGGTT  44 54
QR90_RS01175  242960 ..  242996 + -25.3  -3.63694   GGACTGCCGGCAAGG    CAGTGGTCCGCCTTCCC ATT GGGAAGACGGACCACTG    TTCTTCGCGCTGCGT 100 46
QR90_RS01190 NONE
QR90_RS01195  249321 ..  249358 + -12.8  -3.34344   GGGCAGGACGGAAAA   TCACCCTGGGTGGG GACACAGCAG TCCGCCCAGGGTGA    TTCCTTGCGGCCTCC  74 54
QR90_RS18250  252206 ..  252236 + -20.6   -3.6579   AGCTTCTATATCTTC       GAATGCCCTCACCT TTC AGGTGGGGGCATTC       TTATTAGGATAACTT 100 40
QR90_RS17025  252830 ..  252841 +    -3  -3.44047   AGAAACAAAGATGCA                CATA TGCT TATG                 CTTTTGTTGGTCCTT  49 225
QR90_RS17030  254113 ..  254145 + -12.8  -2.74523   CCTGCGTGCCCTTCC     TGCGCCACGACACGC TGCA GCGTGTCGTGGA-CA      TCGTCTTCGCCATGA  68 175
QR90_RS01215  255165 ..  255179 +  -4.3  -3.35996   TCCAATTCGTTTCTA               TCTGT GGAAG ACAGA               TTCTAAATCACCCTC  48 71
QR90_RS01225  256856 ..  256878 + -15.6  -3.47361   GTACGGAAGAGAGCA           GGGGGGCGAA GGT TTCGCTCCCC           TCTTTCGTCAGTCTG  85 58
QR90_RS01245 NONE
QR90_RS01250  260879 ..  260909 +  -6.8  -2.52464   CAGGCCTACGTCTTG       CGTTCCCGAACC GCTTTCA GGTTCGGGCAAG       TCAATTCGCCGCGCA  48 45
QR90_RS01265  263410 ..  263436 +  -2.9  -2.79183   ATAGCTTGGCCTAGG         GCGCGCTAG ACTTCTGCG CTGGCCCGC         TATGCTGGGCCTGGG  40 63
QR90_RS01270  264504 ..  264525 +  -2.9  -4.54047   CTCCGCAGCCCACTG           GCTCAGGCGT TCT GCGCCTT-GC           TTTTCTGTGCACTCG  69 114
        pyrR NONE
QR90_RS01285  266873 ..  266897 +  -2.1  -3.22774   CACCTGCTGGTGGGG         CGCGACTGAG ATGAGG TTCGG-CGCG          TTGCTGGTGGCTGTG  43 17
QR90_RS01290  267454 ..  267510 +    -5  -2.66316   TGGCAAAGCGGGCGG TGCCGCCGGTGGGC-ATCACGTGGCTG GGAC CGGCGACGTAATCGCCCAGCGCCTCCA TGCTGTACTCGCCGA  42 195
        lptB NONE
QR90_RS01315  273706 ..  273734 +  -9.5  -3.21395   TTCCGCCGAGAAGCT        GTAGCCGGGGC CGCCGGT GCCCCAGCTGC        TCTTCTGCGCCGGGT  60 353
         ald NONE
QR90_RS01335  276586 ..  276614 + -15.3  -3.89695   CAGTCGTATCAATTT        CTGGCCCTGACCG TCG TGGTTGGGGCCAG        TTCTGTTTCTCAGAG  91 61
QR90_RS01340 NONE
QR90_RS01345  278886 ..  278901 +    -6  -4.13304   AGGGCCTCGGCCAGC              GCCCGC GTCA GCGTGC               TTTTGCCGGTGCTTT  69 479
QR90_RS01400  287849 ..  287859 +  -3.2  -3.53224   CGATCCCCGCCAGCA                 CGTC CAG GATG                 TTTCCGGCCACGGTA  49 141
QR90_RS01415 NONE
QR90_RS01420  292179 ..  292199 +  -3.1  -2.87468   GGCAGCCCAGAAATG            TGCGTCCAG GCA CAGGACGGG            TGTGATCTACTCCAG  42 51
QR90_RS01425  292959 ..  292972 +  -2.3  -3.88498   GACGTGTCAAAAGAG               CTCCC ACTC GAGAG                TTTCGTCTGTCAGAA  54 97
QR90_RS18140  293726 ..  293753 + -15.7   -2.8547   GAACGAGGAACTGCA        GGTGTTGGGCT TTTGGT AGCCCAACACC         TCTGCTGTGGAGCGT  79 7
QR90_RS01445  296778 ..  296804 +  -6.4  -3.36228   GCGCCGCGGAGTAGC         CCTCGACAGCCT CAG AGGCTGCCCCGG         TGTGTTTATCCTGGC  55 27
QR90_RS01455  298556 ..  298580 +  -9.3  -5.03715   GCTTCGCCTCCGTTC          GTCCTCTGC CGTCCGC GCAGAGGGC          TTTTTTACGGCTCCT 100 42
QR90_RS01490 NONE
QR90_RS01495 NONE
QR90_RS01500  306877 ..  306920 + -31.3   -4.2461   CGCCCGTCCGCACCA CAGCGCTTGCGCCCGAGAA TCTGTT TTCTCGGGCGCAAGCGCTG TTTGTTGCTGAAGGT 100 53
QR90_RS01510 NONE
QR90_RS01515  311444 ..  311461 +  -9.1  -3.03441   CAGTGGTTCAGGACA             CGCTCGT TCAG ACGGGCG              TGTTCAGGGCTGGTC  55 205
QR90_RS01540  317852 ..  317892 +  -5.3  -2.78384   CGCCCGGCACAGGCC CGCTGGGGCGCCTGAGAC GTCGCA GGC-CAGCCGTCCCAGCC  TGTCGTCCGAGCCGC  43 265
QR90_RS01560 NONE
QR90_RS01565  321792 ..  321814 + -12.6  -2.80016   GATCGTAGACGACCT           GTGCGGCGCG CAG CGTGCCGCCC           TGCTTGGTGGTCAGG  63 418
QR90_RS01575  323850 ..  323876 +  -3.4  -3.53343   CAGGGAGCCGCCCAG         CGCCTGCCAGGC CGT GCCAGTCCAGCG         TTTCACGAACACGTT  49 493
QR90_RS01585 NONE
        proB  326880 ..  326894 +  -5.6  -2.54523   TGGCCGGGAAAACAC               GCCAGA GGG TCCGGC               TCACTTCCGCTCTGC  46 47
QR90_RS01595 NONE
QR90_RS01600  328581 ..  328606 +  -6.8  -2.52464   ACGCGCGGCCGCTAA         GGGC-CGTCCT CGTGC AGGCCGCGCCC         TGCCTTACGAAGCGC  48 26
QR90_RS16560  332183 ..  332193 +  -4.6  -3.64822   GTCAGCCAGCTTTAC                 GGGG TCG CCTC                 TTTGCGTGCCCGCGT  55 255
         nth  336634 ..  336644 +  -4.6  -3.34517   CGCAGGACGTGGGAC                 GCGG GAA CTGC                 TCTTTACCCCGCACT  50 53
QR90_RS01635  337922 ..  337955 +    -6  -4.07568   TTGCCGGTTTGAAGA     GAGGAGG-CAGTGCG CGGTA CGCAGTCCCCTCCTC     TTTTCCCACGCCCCG  65 29
QR90_RS01640  339678 ..  339717 + -19.4   -4.1899   AGACTGTTGAAGCCA  GAGGCCAGCCACCCGGAGA ACG TTTCCGGGCGGCTGGC-TC  TTTTCGATCGAGTGC 100 41
        deoC NONE
QR90_RS01700 NONE
        mreC NONE
QR90_RS01710  353367 ..  353393 +  -5.1  -3.85698   CTGGCTGTGGAGGGT        GGGGC-ACAGCC CCCT GGATGTGGTCCC         TTTATGAGCCGCGCC  60 63
QR90_RS18255 NONE
QR90_RS18260  355679 ..  355710 +  -8.6  -3.14132   CGGGCCGCACGCGCA      CGCGCAGAGGGGTTG TGC CCGCCCC-CTGCCCG      TTGATCAACACGCGG  56 218
QR90_RS01730  358979 ..  359000 + -15.9  -4.45083   TCCGAACCGTCAAAA           CACCCGCCA GTTG TGGCGGGTG            TTTTCTGGGTCTGAA 100 54
QR90_RS01740  360348 ..  360358 +  -6.8  -3.14683   AGGCGGGGCGGGGGA                 GAGG CTG CCTC                 TTCATCACCCCCTGT  53 48
QR90_RS01745 NONE
QR90_RS01750  361500 ..  361510 +  -6.8  -3.34398   ACTTGCCGAAGTGTC                 GCTG GAC CAGC                 TGTTTCAGAAGACGC  55 65
QR90_RS01755  362539 ..  362554 +  -2.4  -3.17797   GGCGAATTCCCCTGG              TAGGCC GCGC GGCCCG               TTCACTCTGTCTCCA  43 23
QR90_RS01760 NONE
QR90_RS01765  364640 ..  364664 + -12.8  -5.40625   GCCACTTCTGACTAT          CCGCTCTGGC CCTGT GCCGGGGCGG          TTTTTTCTATGCTAT 100 43
QR90_RS17045  365040 ..  365065 +  -3.9  -3.23395   GCACCAAACTGCCAC         GCCAGCTTGAT CATG AACAGGATGGC          TTCCTCGTCGTGGGT  45 187
QR90_RS01775  365829 ..  365861 + -19.3  -3.52906   CGATCTAGACTGTCT      GGGAGGGTCAGAACA TTG TGTTCTGGCCCTCTC      TTGTATCGGATTCTC  95 53
QR90_RS01780  367953 ..  367963 +  -6.8  -4.75308   TTCCTCTCCCCGCTC                 GCGT TCA ACGC                 TTTTTCCATGTTCCT  81 107
QR90_RS01785 NONE
QR90_RS01790  369959 ..  369994 + -14.1  -4.41353   TAGCCTCCACTGGAT   GGGCCGCA-GC-CGGAG GAAA CTCCGTGCCTGCGGCTC    TTTTCGTGTGTGTGG 100 38
        ruvC  370514 ..  370530 +    -5  -3.07816   CTACAGGCGGCCGCC              GCCCGG CTGGC CCGCGC              TTAACTGCCTCCACG  47 5
QR90_RS01800  371718 ..  371774 +   -13  -3.33696   CGTCATTTCGCAGTG GGTGACGGGATCGCC-TTC-GCCGCCAG CCA CTGGGGGCAGAAAGGCCACCTCGTCCCC TTCATTCAGGGCCCG  70 456
QR90_RS01810  373960 ..  373990 + -23.4  -5.50774   CAGATGCGTTCTTAA       GCGCCCCGAAACCG TAA TGGTTTCGGGGCGC       TTTTTATTTGTTGTC 100 63
QR90_RS01855  381845 ..  381855 +  -5.4  -3.53012   CCCTGAGACGAACCG                 CGAT TGA ATCG                 TTTGCAAAACGGCGA  53 57
QR90_RS01860  383433 ..  383467 +  -8.6  -3.05384   GGCCCGGTGGGACAG    TCGAAGGCC-ACGGC AGGCAC GCCGTAGGCCTGTGA     TTCCATCAGGACCAG  55 269
QR90_RS01870 NONE
QR90_RS01875 NONE
QR90_RS01880  387971 ..  387982 +  -5.8  -2.87931   TGCGACGTTCAGCCT                GCTG AAGT CAGC                 TGTGTCCCACCTCGG  48 93
QR90_RS01900 NONE
        nrdI NONE
        nrdE NONE
QR90_RS01915  395970 ..  395981 +  -4.4  -2.70932   CAGCCCGCCGCAAGG                GTCA GTCA TGAC                 TGATTCGCAGACCCC  42 11
QR90_RS01920  396374 ..  396384 +  -2.4  -3.84451   GGTACCCTCAGACGC                 GGGC CTG GGCC                 TTTGCCTTTGCCGCC  54 135
QR90_RS01925  397132 ..  397169 +  -5.3  -3.42699   GACGGGGCCAGCCAG   AGCCAGGAGGACCAGCG CTGA CGCTGGCGCTCCATGCA    TTCTGCTCAATGCAT  53 5
QR90_RS01945  404331 ..  404385 +  -7.2  -3.13403   CAGGTCCGCCTCGGC GG-GGCGCAGGCGCAGCAGGTCGCTGAG CAG CTT-GCGGGC-GCTG-GCCTGCACCACC TGTTCCTGACCGGGC  53 265
QR90_RS01975 NONE
QR90_RS01980 NONE
QR90_RS01985 NONE
         tkt  411679 ..  411703 + -15.7   -4.1891   GTCTCCGCACAGAAA          GTCCCCCGGCG AGA TGCTGGGGGAC          TTTCTGTTGGGGAGA 100 46
QR90_RS02005  414614 ..  414638 +  -3.4     -2.67   TGACCCTCAGGTGAG         GCGGGCG-CCG CAGC CGGACGCGCAC          ATTCTGGATTGGTTT  39 38
QR90_RS02010  415380 ..  415403 + -13.9   -5.0538   CACCGGATGCGGAGA          GGCTGGGAC ATGTAC GTCCCAGCC           TTTTTTGCGGTCGGG 100 46
QR90_RS02015  416149 ..  416165 +    -3  -3.29144   GGGCCACCTCACGGG             CCA-GCA GTTC TGCCTGG              TTGTAACCGCGCTGG  45 295
QR90_RS02030  417538 ..  417553 +  -4.6  -3.55444   AGTGCCTGAGGGCGG              CGTGGC AACC GCTGCG               TTTCAACCGTAGAGC  55 32
QR90_RS02035  418771 ..  418784 +  -2.3  -2.90194   TTGTTCCGGTTGGGC               CTGCG GCCA CGCAC                TATACTTCCGGGCAT  40 74
QR90_RS02040  419307 ..  419338 + -17.3  -3.55071   CCTCTGAAGAAAAAG      GGGCCGCCGGG CGTTGATTTT CCCGGCGGCCC       TTTCACCGAATGTAG 100 64
QR90_RS02050  421017 ..  421045 +  -9.5  -2.91274   TCGAGCACTTCCTGA        TGCGGGGCTGAGG TTG TTTCAGCCCGGCG        TGTGCTTCAGCTCGC  58 15
QR90_RS02075  425971 ..  426005 +  -8.5  -3.41051   CCTGAATCACACGTC    GGGGGGCGGGC-G-CCG AGA CGGTCCGCCCCTCTCCC    TTGTCGTGACCCTGG  63 46
QR90_RS02080 NONE
QR90_RS02085 NONE
QR90_RS02090  428191 ..  428203 +  -5.5   -2.5955   GAACTGAAATGAAAC                CTTCC ACC GGAGG                TCCGTTATGACCCGT  46 29
QR90_RS02095  429545 ..  429557 +  -3.3  -3.14132   AGGGCACCCGGAACT                CTCGC GCC GCCAG                TTGGTAAAACACCCG  45 479
QR90_RS02105  430959 ..  430976 +  -6.9  -3.70863   GCACAGCCTGAGGTT             CCGGTGA GTCC TCCCCGG              TTTGACTGCTGTATG  62 96
QR90_RS02110 NONE
QR90_RS02115  433392 ..  433402 +  -6.8  -2.79302   GGCGTCACGTCCCGC                 CGCT CCC AGCG                 TATGCTGGGGGTCAT  49 98
QR90_RS16580  434166 ..  434190 + -10.7   -4.3467   CTGCCGTTGCCAGAA          TCGCCGTCC CGAGTGT GGGCGGCGA          TTTTGCTGTCGCCCT  89 44
QR90_RS02125  435195 ..  435209 + -11.4  -2.90496   CGCTGACGCGGTTGG               CCCAGG CCT CCTGGG               TGATTTCCAGGGCCG  61 172
QR90_RS02135  436168 ..  436212 +  -7.8  -4.18934   GACCTCGCCCACCAG CGC-AC-GGGGCAGGCTGCCGT CCA GCGTCAGCGTGACCCAGTGGCG TTTGTTCAGGTGGTA  73 161
QR90_RS02160 NONE
QR90_RS02165  444603 ..  444628 + -10.4  -3.96705   CCTGAACTGCTCAGT         CCCCGCCC TGAAATCGAC GGGCGGGG          TTTCGCTTTTCTGGA  78 80
QR90_RS02170 NONE
QR90_RS02175 NONE
        nagZ  448380 ..  448393 +  -3.7  -3.21772   CTGACTGCCTATCAG               CGGGC CGGG GCCAG                TCTTCTGCGGGACTT  47 138
QR90_RS02190 NONE
QR90_RS02195  450238 ..  450288 + -23.5  -2.87463   GGGGCGACGACAGGC GGCTGAAAAGAGGGCGGAGACTGT TCAG GCGGTCTCCGCCCTCTTT-CTGCC TCTCTGGCGCAGGTT 100 58
QR90_RS02205  451264 ..  451321 + -29.5  -3.55444   CTTCTCCCCGGCGGC CAGCCCTGAACGCACGGGATCAGGGC GACGTGA GTCCTGGTCCCGTGCGTTCAGG-CTG TTTCCCACGTCCCGC 100 82
QR90_RS02210 NONE
QR90_RS02215  455222 ..  455242 + -11.1   -4.7373   CCGCTTCACCCTGTC            GGCCCCC TGCATAC GGGGGCC            TTTTTGCTGCCGTGC 100 44
        rlmB NONE
QR90_RS02225  457122 ..  457147 + -11.1  -4.08557   TAAGCCCGGGGAGCG         GTGGGCGGCGTC CAG GGCGC-GCCCGC         TTCTTCTTTCACGAA  79 226
QR90_RS02245  460280 ..  460301 +  -5.8   -3.9534   AAACACACGGGCCAT           TCGCGCCT ATGCGA AGGCGGGA            TTTCTGCCTCTCGCT  62 418
QR90_RS02255  461212 ..  461225 +  -5.2  -3.55444   ATGAGGTCTCTCAGT               CCGG CCTGAA CCGG                TTTCGCAGCTGGAAG  55 37
QR90_RS02260 NONE
QR90_RS02265 NONE
QR90_RS02270  464183 ..  464229 + -17.2  -4.15565   AGGAAGGGCTAGAGG GAGGCGGGGGCCAGGACGCT GAAACCG GGCGTCCCCGCCCCCACCTC TTTTAACGTCATGGA 100 40
QR90_RS02275 NONE
QR90_RS02280  466114 ..  466132 +  -9.5  -5.22006   TTCTCTTTCCTGTTG             CCCTCGC CGTGT GCGGGGG             TTTTTCTTGTGGTGG 100 45
QR90_RS02285  466704 ..  466721 +  -4.7   -5.4833   TATATTGTTTCTATC             ACCGTCC GAGA GGGCGGA              TTTTTTATTGCCTGC 100 118
        trpE NONE
QR90_RS02325 NONE
QR90_RS02330 NONE
        trpD  474173 ..  474189 + -11.5  -3.33261   CGCGCTAGGGGAGAG              GCCGGGG TGG CTCCGGC              TTATACGGATTCCGA  69 33
QR90_RS02345  476367 ..  476397 +   -17   -2.8655   TGAAAGTGAACAGTT       GAGGGCAGAAGG AAACGCG CCTTCTGCCCTC       TGTCCTGTGCCTCCC  87 38
QR90_RS02355 NONE
QR90_RS16590 NONE
QR90_RS02365  480409 ..  480454 + -14.2  -3.03771   AAGCGGCTGTTGACA GCCTACTCGCCCAAC--TCTGG TTAT TCAGAAAGTTGGGCGAGTCGGC TGTTCCAGCCTGTGC  78 39
         cmk NONE
QR90_RS02400  485899 ..  485925 +  -6.4  -3.18264   CACGGCAGGATTGCC         CAGCGCCTTGAG GAC CCTGAGGCGCAG         TTGATACGTGCCGGA  50 118
QR90_RS02435 NONE
QR90_RS02440 NONE
QR90_RS02445  500747 ..  500769 +  -6.2  -2.72855   TTGACTTTGCCCGGC           GCAGTCCCTA GCC TCGGAACTGC           TCCTTAAGGCATTTC  46 83
QR90_RS02450  502454 ..  502482 +    -6  -3.25088   TCTGAACGTGAGCAG        GGTGACTCGG CAAGGTCGT TCGGGTCACC        TTCCTACCTTTCAAG  51 51
QR90_RS02455  503733 ..  503757 + -11.4  -3.66286   AAACACGGAGAGGGA          GGAGCGTGAG ATAGC CCCACGCTCC          TTGTTCGGATGCTGT  73 47
        panB  509411 ..  509421 +  -3.2   -4.7173   CGTCAGACCTTTAGA                 CGGT TCG ACTG                 TTTTTAGCTGTCCTG  73 91
QR90_RS02515 NONE
QR90_RS02520  515655 ..  515671 +  -2.1  -3.59979   CGCCCACATCTGAGC              GTCTGCC TGT GCCCGAC              TTTCGGCTGACGCCC  49 28
QR90_RS02525  516755 ..  516781 +  -9.2  -2.78384   GGTAGTACCGGACGG         CCCGCCCGGCCC GCT GCTCCTGGCGGG         TCTCCTGAAGCAGGC  52 429
QR90_RS02535  518368 ..  518398 +  -6.1  -2.89564   CCCGTAGCGGCCTGC      CGCACCGTCCGG TGTGAAGT CCAGACGG-GCG       TCTATGCCGTCCACG  47 240
        menC NONE
QR90_RS02560  522627 ..  522640 +  -3.8  -2.57621   CCACCCCAGTTGACA               CCTG TCGTCT CAGG                CTGTGTTATGTTATT  41 51
QR90_RS02565  523364 ..  523388 +  -6.3  -3.62046   CAGCCGGGCGAAGAT          CATGCGGCCCA CGT TGGTCTGCACG          TTGTTGACCACCTGC  57 180
QR90_RS02580  526917 ..  526935 +  -5.8  -2.70932   CGTCTAGCCGCGCGG             CGCGGCCC GCC GGGCCACA             TCCTTGAGGGCCAGG  46 0
QR90_RS02595 NONE
QR90_RS02600  531440 ..  531456 +  -3.5  -4.62302   TCCAGTCGGTGTAAC              CGGCGGC CTC GGCGCGG              TTTTTGAGCGTCTTG  72 253
        coaE  534441 ..  534459 +    -3  -4.25104   GTGCCGCCCTCCGGA             ACGCCG TACAGCT CGGCGA             TTTTGGTGCCGGCCC  65 349
QR90_RS02635  539552 ..  539587 +  -6.6   -3.5393   GTAGGTGCGGGCGTT    CACCTCGACGCCGCCG ATCA TGGCGGGTTCGCGGAG     TTTCAGGCGGGTGGT  57 168
QR90_RS02660  546603 ..  546622 +  -8.6  -2.64616   ACCCGCTGGCCCGGT            GATGGACGC CCT GCG-CCATC            TGCTGTGGCTGCCCG  53 53
QR90_RS02665  547607 ..  547624 +    -4  -3.96148   TGCAGGTTGACGCGT             CCGGGC GCTGAA GCCCGC              TTTATCCTGCCGAAA  58 15
QR90_RS02670  548209 ..  548225 +  -2.2  -3.59979   GGGATTGTGGTCTTC              CGGAGG GCACG TCTTCG              TTTAAGCTCGGAGAC  49 111
QR90_RS02675  549611 ..  549629 +  -2.2  -3.31144   GGCTACCCTCAACGG             TCAGGCGC TGG GCGGCGGG             TTCTGAAGCTGAAGC  45 1
        trpC  554266 ..  554299 +  -8.1  -3.08867   AGGGGCCGAGACCCC     GTCTTCCCGCC-CCGG TCT CCGGCGGTGTGAACAC     TGTCTTCAACCTTCA  57 40
QR90_RS02705  555702 ..  555724 +  -7.6  -4.84642   GTAAACGTGATAAAA           CGGAGGGGTA ACA TAACCCACCG           TTTTATTCGTTTGCC  88 220
QR90_RS02710 NONE
QR90_RS02715 NONE
QR90_RS02720 NONE
        nuoD NONE
        nuoE NONE
        nuoF  561053 ..  561084 +  -2.9  -3.60792   GTCAAACCGTCTCAC      CGTCAAACCGCCA CATCTT TTGCGGTTAGACC       TTTAGACCTTCAGAC  51 64
        nuoG  563344 ..  563369 +  -3.2  -4.02736   GTGGCAAGTGGCCAG         TGGTGGGTGG AAAAAG CCGTCTGCCA          TTTGTCCTCTGCCTT  58 86
        nuoH NONE
        nuoI  565337 ..  565359 +  -4.6  -3.23216   AGACCCGCCGCCGAA           GGCGGCCCCC AAT GATGACCGCC           TTCATCCTGCTCGGC  48 133
QR90_RS02755  565973 ..  565998 +  -2.4  -2.50816   GAAACGACGAAGGGG         AGGTGCGCGC GTAATG GTGCCCACCG          GTTACTACATCGCCC  37 12
        nuoK NONE
        nuoL  568274 ..  568291 +  -6.9  -2.82834   GGCGTTGCACCGCAG             CGCGCTG ATCT CAGCCCG              TCTCATCCTACCCTC  50 67
QR90_RS02770  569745 ..  569762 +  -2.6  -2.64735   GTGAAATCCGTTCTC             GCTGCC CTGGGA GGCAAC              TGATATGCCTCAACT  38 5
QR90_RS02775  571263 ..  571285 + -16.3  -4.72272   CGACCCACCCCCTCG           GCCCCCTCC CGCGC GGAGGGGGC           TTTTTCGTGGCCCGG 100 58
QR90_RS02780 NONE
QR90_RS02785 NONE
QR90_RS02790 NONE
QR90_RS02795 NONE
QR90_RS02800  576991 ..  577017 + -13.6  -3.44229   CTGATTGAGGAGCCT         CCTCCCGTTGCG GGG CGCTCCGGGAGG         TTCTGATGCTCGCAT  79 123
QR90_RS02805  578025 ..  578046 + -10.1  -2.78384   TCCTGAACACCACAG           CGCCACCTC CGAA GAAGTGGCG            TGTGGTGGGGGCGCG  60 35
QR90_RS02815 NONE
QR90_RS02820 NONE
QR90_RS02825  583406 ..  583423 +  -2.6  -2.84794   GCCACTTCGTGGGGG             GTGTGC CACAAT GCGCGC              TACTTCTCACATTCG  40 50
QR90_RS02830  583993 ..  584036 + -18.2  -3.66178   CTGAGGCGGGCGGCC AGCCACAGGCAGGGGACTGAG TCG CGC-GTCCTCTGCCTGTGGCC TTTGGCCTTCAGCCC 100 37
        lysS  586440 ..  586485 +  -6.1  -5.14563   GCGCAGGTTTGAGCT GGACCGGC-CCTGCGGT-CTG CCGTCT CAGGACCACGGGAGCTGGACC TTTTTTGCTGCCCCC  87 29
QR90_RS02845  587975 ..  587987 +  -4.7  -2.72463   GACGTAGTTGGCGGT                GCGCG GGA CGCGG                TGATTGAAACTGCGT  44 49
QR90_RS02850  589233 ..  589244 +  -2.2  -3.14683   AGCGACTTGCTTCCG                GCGA GGGC TTGC                 TTCGTGGCCCCCTCT  43 91
QR90_RS02860  590453 ..  590492 +    -7  -3.16564   GAACTGCAACTCGAA  GCC-GTTCTCGTCGGCGTG CAG CACGGTGGCGCGCACCGGC  TTGGTGCGGTAGCGC  53 221
QR90_RS02870  591989 ..  592003 +  -3.4  -4.57341   GACGGCGTCCGGGGA               CCGCTC CAT GGGCCG               TTTTTCCACGAGGTT  69 39
QR90_RS02875  594387 ..  594397 +  -8.2  -2.62263   GCGCGGCCCCGCAGC                 CGGC CAA GCCG                 TGATCTGCGCCCGCT  53 12
QR90_RS02880  595290 ..  595306 +  -3.5  -3.41878   GCCTGCTGGAACGTG              AGGCCGC CGG GCAGCCG              TTCTGCGTTGGCAGG  49 419
QR90_RS02895  597248 ..  597276 +    -3  -3.80573   CACCGTGACGGCCAG       CCC-CGGCGTCAG GGTG CGGGTGTCGTGGG        TTTCGTAGTCGTCCA  53 265
QR90_RS02920  601621 ..  601633 +  -5.5  -3.85698   GGCTGGTAGCCCGCC                TCCCT GCA AGGGG                TTTCTGCAACCAGAC  62 32
QR90_RS02925 NONE
         pth NONE
QR90_RS02935  603908 ..  603927 +   -15  -4.53163   CAGCACCGTCAAAAA            CCCCCAGG ATGG CCTGGGGG             TTTTCTCGTGTCTCG 100 60
QR90_RS02950  607749 ..  607762 +  -2.3  -3.53811   AGGTTCAGCCAGTCC               AGCAG GCGC CTGCG                TTTCGCCGGGCTGGC  50 271
QR90_RS02995 NONE
QR90_RS03000  617256 ..  617269 +  -4.5  -3.90112   ATGCTGGTCGAGAGT               CGCGCC CCT GGC-CG               TTTCGTTCCGGGCCG  58 96
QR90_RS03005  619498 ..  619512 +  -2.8  -4.06491   CGTGGAGTGTGGACA               TCGG AGCTGTC CCGA               TTTCTGTCGCGTTAC  58 117
        carA NONE
QR90_RS03015  621489 ..  621524 +  -7.4  -4.82901   GGTGTGTTCTTACCG    TCCACGCCGCAGCCGT GCAT AAGACTGCGGCGTGCC     TTTTTCTGCACAACC  88 77
         ung NONE
QR90_RS03025  625126 ..  625152 +  -6.5  -3.53444   GGGCCACCCTGGCCG        CC-TGCGGCAGG ATGA TCAGCCGCATGG         TTTCCGCGCGGCTCA  55 282
QR90_RS03050  630614 ..  630646 + -17.8  -4.19238   CGGTGGACCCCAGCG      CGAGAAGGCCCCGC AGTCG GCGGGGCTTTTTCG      TTTTGAGGTTCGGGC 100 46
QR90_RS03055  632512 ..  632530 +  -7.3  -5.58179   CCAGACAATAAAAAA             GCCCCGC GCCAG GCGAGGC             TTTTTTATTGTGGTG 100 403
QR90_RS03075  635480 ..  635493 +  -5.9   -2.5474   TGGGGGAGGAGAAAA               GCGGG TCAT TCCGC                CTATTCTGAATCCCA  46 3
QR90_RS03080 NONE
        hemW  637484 ..  637510 +  -2.1  -3.72784   CGCGAGTGGCTGGGA         CTGGTCACCAG AAGAA CCCGTGTCCAG         TTGCTTTGTTGTGCC  53 258
QR90_RS03095  638916 ..  638953 +  -3.3  -3.63073   CCGTCAGGCTGGCGG   CTGCGCGCAGCTCAGGCG GAG TGTCT-AGCGGCGTCCGG   TTGTTCGAAGCTGTC  51 42
QR90_RS03120  646578 ..  646633 + -18.4  -4.11394   TCACCCCTCGCACCG CGACACGCCATCAAAACCCCCCTCCTG CGA CAG-AGGGGGTCTTTGATGGCGTGCGG TTTTGGGACTAGCGT 100 41
QR90_RS03130  649472 ..  649512 +  -4.5  -4.46615   CATTACACCAGCCCA  GCACCACGCTGTCGGGG CTGTCCA CCCAGACGGCGGCGTAC  TTTTCCTTGCTGCTG  72 298
QR90_RS03140 NONE
        eutC NONE
QR90_RS03150  652759 ..  652793 +  -7.2  -3.79787   AATCGCTTGCCTCGT     CTCCTTCCATCTGAAA TAC TTCCAGATGAAATGAG     TTTACCTTCCTCTCC  65 86
QR90_RS03155 NONE
QR90_RS03160  655130 ..  655151 +  -9.3  -3.65986   GGTGCAAAAGAAAGA           AGCCCCGGC AAAC GCTGGGGCG            TTCTCCTTTGTGGTC  68 184
QR90_RS03185 NONE
QR90_RS03190 NONE
QR90_RS03195  664229 ..  664242 +  -2.3  -2.79831   CGCTCAGCCCTGAGC               CCCAC CAGA GTCGG                CTGTTTTCCCGTAGC  39 41
QR90_RS03200  665894 ..  665918 +  -9.3  -3.10464   ACGCCCCAGACCATG         CCGCCG-GTC AGTTGC GACTCGGCGG          TCTTGGCATTGATCA  55 387
QR90_RS03225  672214 ..  672242 +  -8.1  -4.42464   AAAGGGCGCAGGAAA        CGGATTCCGGCTG TTA TGGCTGGAATCCA        TTTCTTTGCGGGATT  84 44
QR90_RS03240  674325 ..  674335 +  -8.2  -3.69323   GCGTGATCCAGTAGC                 GCCG CAG CGGC                 TTTGGATGGTAGTCC  69 47
        lipB NONE
        lipA  676720 ..  676748 +  -3.8  -4.56597   CGCGGGCGGGGCAGA       GGG-GCCG-GGGCG TGC TGTCTGCGGCTCCC       TTTTTGGCACGCACC  72 45
QR90_RS03260 NONE
         dxs  679514 ..  679547 + -20.5  -4.13995   TGAGGCAACCAGTCA     GAAGGGGAAACAGTG CTGA CGCTGTTTCCCCTTC      TTTGGTTTATCCCCG 100 38
QR90_RS16615  684705 ..  684734 + -16.5  -4.93696   TGTATCCAAATCAAA       GCTGCCGGAGG CCTGTTCC CCTCCGGCAGC        TTTTTGATGTTTCGC 100 44
        fusA NONE
QR90_RS03300 NONE
QR90_RS03305  692005 ..  692019 +  -4.2  -4.15044   CGTGGAGTTGGCAAA               CCGG TGCCTTC CCGG               TTTGTTAACGGAGCA  63 233
QR90_RS03310 NONE
QR90_RS03315  694045 ..  694073 +  -7.9  -3.28712   GCCCACCAGGGTGCC        CCAGGCCGAGCGC AGG GCGTCCGGCAGGG        TTCTACGCACCAGCA  55 165
         fni  696214 ..  696225 +  -4.4  -2.71712   AGGTGGCCGTACAGC                CATG CCAG CATG                 CTTTCCAGCCGCCGG  42 416
        raiA  699383 ..  699418 + -12.6  -3.85698   AGCCGCTGAAGGTTG    GAAATGAGGTTCGGGC CGCA GCCTGGGCCTCATCTC     TTTCTCAGAAGCGGG  83 40
QR90_RS03355 NONE
QR90_RS03360 NONE
         map  702678 ..  702688 +  -4.6  -3.21099   CCACCGCCAGCACTA                 CGGC CTC GTCG                 TTGCTCCTGCCGCGC  47 308
        recQ  707333 ..  707380 +  -6.9  -3.07522   CGATGACCAGCGCCG CCGCG-AACTCGGCCAGCGAGGC GATG GCC-CGCGCGCCCAGTTGCACGG TCTGTTCGGCGGTCT  48 379
QR90_RS03405  713715 ..  713763 +  -7.9  -2.80074   AGCTCCAGCCCGCGC CGCTCGGCCTCGGCCTTGTTCGT CTT GCGGACGCGGGTGGGGGCCAGCG TGATGTTCTCCAGCA  49 461
QR90_RS03415  715292 ..  715336 +  -4.3  -3.53224   GGTCACTCGAACGAA T-AGAGGGGGTCAGCCGA ACACACATCC TGGGCTGGCCCCCTCCCA TTTGAAAAGGAGATG  51 41
QR90_RS03420  717739 ..  717766 +  -7.6  -4.17048   CCCTCTGATTTCTTC        ACGTCCCCGC CCTGAGCC GCGGGGGCGC         TTCTTTTGGCCCGCC  72 221
QR90_RS03425 NONE
QR90_RS03430  719852 ..  719865 +  -3.8  -3.53012   CACAATCGCCTGCGC               CGTC ATGTAC GACG                TTTCCGACGGGCGGG  49 358
QR90_RS03440  720803 ..  720815 +  -4.7  -2.62184   GCATCTAAAGAGATG                GTGCG CCC CGCTC                TCGTCTGCGGCGCGG  43 75
QR90_RS03445 NONE
QR90_RS03450 NONE
        uvsE  722520 ..  722540 +  -3.9  -3.12351   TGCCGCGCTACCCTG            GGCGGCG TGAACGT CGTCGTC            TTCGATCTGGAAACC  47 94
QR90_RS03460  723065 ..  723097 +  -7.7   -3.7941   GCTGAAGGTGGGCGC      GTAGGGGAGGGGG AACTCAA TCTCCTCTCCTGC      TTATTGTGGAGCCTG  65 22
QR90_RS03475 NONE
QR90_RS03480  727733 ..  727777 + -22.2  -3.53012   GTAACCCACAGGTCA GGCTGGGGCGGAGGCGTG GACCATCCA CACGCCTCCGCCCCGGCG TTTGCAGCCCGGCCA 100 37
QR90_RS03490 NONE
QR90_RS03495  732170 ..  732188 +  -5.8  -3.17075   TAGACCGGTGGCGGC             GGGCCGGC GCT GGCGTCCC             TTCCCTTCCCGCCCG  51 107
QR90_RS03500 NONE
QR90_RS03505 NONE
QR90_RS03510 NONE
QR90_RS03515 NONE
        mnhG  735910 ..  735925 +  -3.2  -3.67622   CGGGTCAGGCGTGAC              GCCCAA CGGA TTGAGC               TTCGTTTTAGCCATC  51 518
QR90_RS03535  738651 ..  738662 +  -2.2   -5.1861   TGGGTTCATCCATAC                G-CGG AAC CCGTC                TTTTTTCCTCCTCGC  81 84
QR90_RS03545  742034 ..  742061 +  -8.4  -3.31144   GCGGCAGCGCGTGGG        CCGCGCCTCGTAC TGG GTGC-AGGCGCCG        TTCTCGCGGTCCAGC  59 417
        ftsH  746480 ..  746507 +   -12  -3.52102   CAGCCTGGCCTGAAC        CCGGCAGA-CCGG AGG CGGGCTCTGCCGG        TTCTCTGCATCCCGT  74 28
QR90_RS03585  748427 ..  748463 +  -4.3  -4.78077   GCAGGTCGGCGTACA    TGCGGGTTCTGGCCC ACGCGCC GTTCCAGAAGCCGCG    TTTCTTTTCCTTCAA  77 124
QR90_RS03595  750955 ..  750988 + -21.1  -3.48276   CGGCGATGTGAGATC     GGTGGGGAAGGCCGG CAGA CTGGCCTTCCCCATC      TTCTCTGCCGCGCGC 100 30
QR90_RS03615 NONE
QR90_RS03620  756773 ..  756809 + -26.7  -3.34029   GATCGTCCAGGCCAG    GGGACGGCCCCTCTCCA CTG TGAAGAGGGGCCGTCCC    TTGTGGCGATATTTC 100 49
QR90_RS03655  763677 ..  763694 +  -4.7  -3.63569   GGCGGTGATGGGCAG             CGGCGTG TAGG CGCGGCG              TTGTTCGGGCGTTGG  54 217
QR90_RS03680  767410 ..  767426 +  -6.5  -3.33162   CTCTAAGACGAGAAC              GGCGG CATCTGC CCGCC              TTCTGCCCTCGGCTC  55 200
QR90_RS03685  768904 ..  768941 +  -2.5  -2.78384   CCAGAGGGCTTGAAG   GTGGCGGCGGACGAGTG AGCA CGTTCATCTGGCCCCGC    TATGCTGGACGGCAA  39 8
QR90_RS03690  769767 ..  769789 +   -12  -4.52589   CGGACGATTCTCATT           TCCGCCCC AGCTATC GGGGCGGA           TTTTCTGTGCGCGGG 100 336
QR90_RS03695 NONE
QR90_RS03700 NONE
QR90_RS03705 NONE
QR90_RS03710  773040 ..  773050 +  -5.4  -2.91264   GGCAGCTCTTGCGCC                 CTGA ACT TCAG                 TCTGTCCCTCCCGGC  46 51
QR90_RS03720  776453 ..  776469 +  -2.2  -2.70932   TCACCGTGACCAGCT             CGCAGGT CCGG GCC-GCG              TCGTTCAGGCGACGG  39 164
QR90_RS03735 NONE
QR90_RS17515 NONE
QR90_RS03740  779835 ..  779848 +  -3.7  -2.71003   GGGGACCTCAACGCT               GCGCG TCCG CCCGC                CTTCTCGTCTCTTCC  42 40
QR90_RS03745 NONE
QR90_RS03750  782101 ..  782135 + -15.8  -3.63569   GCTGCTCGGGGCAGG     GGAGGGGCGGAGTC GCAAACA GACTCCGCCTCTTC     TTATTGCCGCGTTCA  86 42
QR90_RS03765  787221 ..  787261 + -16.2  -3.10244   GTCCATAACACAGAA  ACAGGTCAGGGAGGCACC GTGGG GGTACTTCCCTGACCTGC  TCGTTTGTTCAGGAG  84 55
QR90_RS03770  788336 ..  788356 +  -9.7  -2.78816   CCAGATCAAAAAACA            GCCCACC ATTGCGC GGTGGGC            TGTGGTCAGAGCTGG  57 467
QR90_RS03790 NONE
QR90_RS03795  792008 ..  792049 + -11.6  -2.74514   AGCCCGACTTTGCAC TGAAAATCCCCCTCCACC ACGCCG GGCAGAGGGGGATTCTCA  TGGTTCGGGCTTTCA  66 45
        miaA  795369 ..  795382 +  -2.3  -3.04398   ATCAACGGCAGCTCA               ATCCC GTTC GGGAA                GTTTTGGGGAAGGAC  41 88
        glgC  796873 ..  796899 + -10.9  -3.65693   ACGGCGGTCAAGAAG        GGGAGAGGCGTG CATT CG-GCCTCTCCC         TTTCACGTCTGTGGT  73 217
QR90_RS03835 NONE
QR90_RS03840  801892 ..  801909 + -12.7  -4.25283   CCCGGTGAATCCTCA             GCCTCGC GAAT GCGAGGC              TTTTCCTCGCCAGGT  88 275
        dnaJ  808887 ..  808912 + -14.7  -4.18018   GTGAACACTTGAAAC         GGACCCCGGGC GCTG GCCTGGGGTTC          TTTTGGATGGGGGCA 100 50
QR90_RS03885 NONE
QR90_RS03890  811560 ..  811582 +   -12  -3.18264   CGCTTCATTCCTTAA           CCCAGCGG AAAAGCG CCGCTGGG           TTCATCCATACGCGG  70 73
QR90_RS03920 NONE
        zapE  818454 ..  818468 +  -7.8  -3.73968   AACACACTAACAATG               CACCCT TTT GGGGTG               TTTGCTAGACCATTT  65 370
QR90_RS03930  820040 ..  820080 +   -14   -4.4891   GAGGGTTTGATTTCT CTGCCTTAGCGCCCCCAAC ACCC GTTGGGGGCGCTGC-GCTG  TTTTGTGGTGCTGCG 100 74
QR90_RS03950 NONE
QR90_RS03955  825286 ..  825310 +  -7.1  -3.53012   ACCCACCTTCCGCCC          GCATGGTGTAC CAT GTGAGCCATGC          TTTCCCCAGGAGAAC  57 117
QR90_RS03960  825736 ..  825756 +  -6.1  -3.65294   GAGACACGCACTCCC            GGTTCCC TATGGCC GGGAGCC            TTGCTTTGTCTGAGG  57 45
QR90_RS03965  827193 ..  827221 + -10.9  -2.72799   GCACCGGAAGTGAAG        TGGGGCGGGGG GTTGTGA CCTCCGCCCCC        TCATCTGTGTGACCC  63 51
QR90_RS04025 NONE
QR90_RS04030 NONE
QR90_RS04035  842366 ..  842398 +  -2.5  -2.52464   GGAGGCGCACCGTGA      CCGCTTCCGGCGT GATGCAG GCGACGGGGCCGG      TGGGTTCAGCGCCGC  37 26
QR90_RS04040 NONE
QR90_RS04045  844430 ..  844455 +  -4.5  -3.01712   GTACGAGTGAGGCCA         GCGCTGTGACC ATCC GGCCTCAGCCC          TCTTCCCAAGGAGCG  45 31
QR90_RS04050  845253 ..  845278 +  -9.7  -3.82084   GCCCAGGTCTGGCCC         TGGCGGGTGTA GGCG TAGACCCGCCG          TTCTTCCTGTTCCAC  73 190
QR90_RS04060  846179 ..  846214 + -12.5  -3.59979   GCGCGGGCGGCAGCT    GCGG-GGCCGGGCGTG ACCGA CACGGCGGGCCGCCGC    TTTACCGTGCAGGGC  77 10
QR90_RS04065  846567 ..  846577 +  -3.2  -3.15677   CCCGGCAGACCGGAC                 GGTA TCC TGCC                 TTCCATGCTTCTCTG  44 57
QR90_RS17945 NONE
QR90_RS04070 NONE
        purD  848994 ..  849004 +  -6.8  -3.14931   CGGGCTGACCCTGCC                 TCCG CCC CGGA                 TTGATCACGGGTCCA  53 109
        rimO NONE
QR90_RS17525  851406 ..  851418 +  -3.3  -3.64371   AATTGCATTGATCGA                GGCGG GTA TTGCC                TTTCAACTCTGCGTT  51 213
QR90_RS04090  854494 ..  854532 + -32.6  -3.57462   GCCTGCCGGATCAAA   GGAGGGGAGGCCACGGCG ATT TGCCGTGGCCTCCCCTCC   TTTCACGCTGACGTC 100 40
QR90_RS04100 NONE
QR90_RS04105  857551 ..  857561 +  -6.8  -3.59979   CACCCTGAACCACGC                 TCGG CCT CCGA                 TTTCCCCTGAAAAAG  59 274
QR90_RS04110  858469 ..  858481 +  -4.7  -3.95036   AGAGCACTTGGGGAG                GCCGG TCT CAGGC                TTCTTTCCCCTGCTT  60 344
QR90_RS04150  868607 ..  868617 +  -4.6  -3.28712   AGTAGCGCAGATCGG                 CGGC CGA GTCG                 TTCTCGCAGCGCACC  49 320
QR90_RS04175 NONE
QR90_RS04180  873612 ..  873625 +  -4.5  -4.93296   GATTTCTACACTCCA               CGTCC GGAG GGATG                TTTTTCTCCTGCTCG  77 82
QR90_RS04185  874372 ..  874405 +  -3.8  -3.41978   CACGCCGCGTGCGTA    GGGGATGGTGGCGCGG AACT CCG-GC-ACCAGCCGC     TTGATCTTGCTGTTG  49 154
QR90_RS04220  879541 ..  879562 + -10.8  -3.44527   CGCCCTGCTTCAGAA           CCGCCCTC CGCCGT GGGGGCGG            TTCTGCTGATGGATG  71 43
QR90_RS04225  880991 ..  881023 + -13.5  -3.40403   CTCTGAGAAATGAAC     GACAGCCCCTGACC GGATAA GG-CGGGGGCTGTC      TTCTGCTGGGGCCGC  79 63
QR90_RS04230  881768 ..  881814 +   -21  -2.87132   TGCAGTTCCTCAAAT GACCGAGAGGGCCATGCAGA ATCTTTC TCTGCATGGCCCTCTCGGGG TCTATGGGGCGGCGG  93 105
        clpB  885599 ..  885621 + -14.9  -4.90906   ACCACGGTGATCAGG           CCCCTCTCC CCGGC GGAGAGGGG           TTTTTGCTGTTCTGC 100 56
QR90_RS04290  892331 ..  892360 + -15.7  -5.50723   GACCGTTCAATCTGG       GGGGTGGACAGGC TGCG GCCCGTTCACCCC        TTTTTCTTTTCCTGC 100 41
QR90_RS04300  895237 ..  895257 +    -9  -5.31275   CGCTTTTGCCAACAG            CCCTCTTC CCAGT GGAGAGGG            TTTTTTGTGGTGGGC 100 45
QR90_RS04320  898982 ..  899024 +  -6.8  -4.09243   CATGCGGGGTCAGCA GCCGCAGGGCCGCGCGCAG TTCGGT CTGGGCGCGTACC-GCCGC TTTTGGGGCGCTGTC  66 305
QR90_RS04345  903513 ..  903535 + -17.8  -3.25223   GGGAGATGACACGGA           GGCCAGCATC ACG GATGCTGGCC           TTCCTGCTATGCCTC  91 92
QR90_RS04350  905183 ..  905211 + -13.1  -2.77701   TGATCTCTTGTGCTT        CCCGGCACAGGTC AAA GACCTGTGCCCGA        TCCTGTTCATGCGCT  63 366
        miaB  911621 ..  911642 + -13.7  -5.46706   CCGTCCCTGGTCCCG           GCCCTCTCC ATGC GGAGGGGGC            TTTTTGTTTTGCCCT 100 42
QR90_RS04385  914503 ..  914541 + -10.9   -5.3104   GAAGTGTCCGCAGGG  ACAGGCGGGGCAACCACG AACG CG-GGTTGCCCCGCCCCC   TTTTGTTTTTGCTCA 100 59
QR90_RS04390 NONE
QR90_RS04395  916721 ..  916759 + -21.8  -4.66938   GCAGGTTTCCAGAGG   GGCGCGGTGCCTGGGA CTTGACT TGCCAGGCACCGCGCC   TTTTGTGTTGAAGGT 100 41
QR90_RS04410 NONE
QR90_RS04415  920011 ..  920041 +  -9.7  -5.00616   CTCATCCTTCCCTCC       CCGGACACGCC ACCCCCCCC GGCGTGTCCTG       TTTTTTGCCGGGCCG 100 155
QR90_RS04420  920741 ..  920769 + -14.6  -3.75169   CTGGACAGCCATGCA       G-GCGGCGAGGGG TAGA CCCTTCGCCGCGC        TTTCCTGACGTGATC  88 43
QR90_RS04430  921858 ..  921874 +    -3  -2.75064   GACGTGCTGCGGCGC             TACGTGG AAGA CC-CGTA              TACTTGAGTCCAGAA  40 2
QR90_RS04435  922464 ..  922486 +  -9.1  -4.29738   CATAAGCCATAAGAA           GGGCCAGTT CAACC AACCGGCCC           TTTTCGTGCGTGTCG  83 63
QR90_RS04445 NONE
QR90_RS04450  925423 ..  925438 +  -2.6  -3.66921   AAAGCTTCCCATCAG              TTCT-CC AGC GGCAGAA              TTTGAACTTAACATT  49 40
QR90_RS18310  926169 ..  926183 +  -4.2  -2.89981   ACCTGAAGCCGTGCC               CTGAAG CCG CGTCAG               TCTCCTGTCATTCTG  44 22
QR90_RS04460  927026 ..  927043 +  -3.3  -3.70149   GGGAGGCGGTACGCA             GTGC-GCG GTA CGCGGCTC             TTTAACTCCTCTCGC  54 45
QR90_RS04465  928843 ..  928856 +  -4.5  -2.71483   CTGGAATAGCGCTGC               TGCGT CAGG GCGCA                TAATTGCCCCCATAT  42 32
QR90_RS04470  929720 ..  929747 +  -7.6  -4.35646   GACGATCTCTCACCC        CGGCCTCCGCTA TAAG TGGGGGACGCCG         TTTCTCTTTCCCTCT  76 72
QR90_RS04475  930884 ..  930894 +  -2.4  -3.67517   AAGGCCCACACCACG                 GCGG GGG CGGC                 TTTGACCTGTTCCTG  50 500
QR90_RS04485 NONE
QR90_RS04490  933070 ..  933082 +  -4.8  -3.34043   CCGTCTTCACCCTGG                CCTG GGCCG CAGG                TTCTAGCGTGGTGGG  50 54
QR90_RS04495  933769 ..  933793 +  -8.5  -3.06831   CAGCGATCCGTACTG          CGCCTGTACGT CCG GCGTGAAGGCG          TTCCATAACCGTTCC  55 288
QR90_RS04505  934688 ..  934702 +    -7  -4.08706   TCCAGTGCCCTCAAG               GCCGAC AGC GACGGC               TTTGTCTGATGGAGC  67 2
QR90_RS04510  935108 ..  935123 +  -5.4  -2.71364   GCCGCGCCCGGCCCA              CGCC-AG CAT CTCGGCG              TCGTTGGGAGCGTCC  44 142
QR90_RS04525  936941 ..  936953 + -10.5  -2.52464   AATGGGCCGTGACCA                GGGGG GCT CCCCC                TCAGTTCCAGGCCAG  59 44
        ligA NONE
QR90_RS04565 NONE
        nusB NONE
QR90_RS04575 NONE
QR90_RS04580  947548 ..  947564 +  -9.3  -3.65812   TCTCGTGCACCTCTT              CGCCGCC CAG GGCGTCG              TTCTGTTCGCGCAGG  63 253
        glnA  953703 ..  953741 +    -9  -3.07013   CACCCGTGTCCGCAG  GCCATTGGGGGCCAATTC CACCT GAATTGGCCCCC--TCGC  TGTATTAAGACAGTG  60 138
QR90_RS04600  955158 ..  955182 + -16.4  -5.75342   TCTTTGAGTCACCGT          GGGGCCGGGC TGCGT GCCTGGCCCC          TTTTTTTTAAGACGC 100 47
QR90_RS04605 NONE
QR90_RS04610 NONE
QR90_RS04615 NONE
QR90_RS04620  959635 ..  959668 + -23.3  -3.64822   ACGTGCAAGTCAAGA     GTCGAGGGCCGGG-GA ACA TCTCCCGGCCCTCGAC     TTTGCATCAAGGCCT 100 63
QR90_RS04625  960751 ..  960763 +  -3.3  -2.76696   TAGCTATCCGGGGCA                ACCTG CTT CAGGG                CTTCTTGCCCACCCC  40 38
QR90_RS04640 NONE
        hisG  964018 ..  964032 +  -9.2  -4.07687   CCTCGCCTGAAGACC               CGCCGC GCT GTGGCG               TTTTGGAAGGAAAGT  76 97
QR90_RS04650 NONE
QR90_RS04655  964243 ..  964257 +  -8.5  -5.46129   GCCCACCAAAAAAGA               CCCGC CTAGC GCGGG               TTTTTTCGTTTGTTG 100 33
QR90_RS04660  965914 ..  965940 +  -2.8  -4.43189   AAGCCTGTAGAAAAA         GCTGCATCTGGA GGT TCTGGGCGCCGC         TTTTCTACCATTCAT  67 449
QR90_RS18315  966979 ..  967001 + -13.5  -2.73159   GACCTTACCCTCGCT           CCCCCTTCT CCAGT AGAAGGGGG           CTTTGAGAGGCTTCG  72 65
        glcF  969828 ..  969853 +  -2.6  -3.55444   GTCAAAGAGTTTAAG         AGTCTAAGGA GGGCGG TTCTTAGACC          TTTAGACCCTCAGAC  49 52
QR90_RS04680 NONE
QR90_RS04685 NONE
QR90_RS04690  973404 ..  973417 +  -3.7  -4.23213   TGGGCCATACTGCAC               CGGCC CTGG GGCCA                TTTGTTCCATGTCAC  63 57
        cpdB  975403 ..  975436 + -18.9  -5.18561   TCTGAAATAAAAAAG     GGAGGGTGGAGGCTG ATTG CGGCCTCCACCCTAC      TTTTTTAAATCTTTC 100 36
QR90_RS04710 NONE
QR90_RS04715 NONE
QR90_RS04720 NONE
QR90_RS04725  980809 ..  980837 +  -5.2  -3.65351   CTGATCCACCAGCCA       CGCGGCCTTCTGG TACA TCAGGCGGCC-CG        TTTCGATGCCCATCG  54 303
QR90_RS04745  984522 ..  984574 +  -6.9  -2.71144   CCTGTCAGCGCTTCT CGCTGCTGTGTCTCGGTCTGACCCG CAGCT CGGGGCGGAC-GTGGTGC-GCGGCG TGGTTGGCCGCAATG  49 63
QR90_RS04780  990424 ..  990447 +  -6.6  -5.29782   TCACGGAAAACCAGA          TGGCCTGCGC GCAA GCGTGGGCTG           TTTTTTGTACGTATG  91 78
QR90_RS04790  992196 ..  992233 + -15.8  -3.72576   ACTGAACGTTGAAAA   GGTCAGCCGCAAAG-AT GTTCA ATGCTTTGCGGCTGGCC   TTTGCTGGGCCGGGG  90 52
QR90_RS04805 NONE
QR90_RS18320  994849 ..  994876 + -11.4  -3.26319   GGGAGGTGGAGACGT        GGAGGCCA-CATC AGG GATGCTGGTCTCC        TTGCTATGCCACGTT  69 174
QR90_RS17080  996415 ..  996429 +  -9.2  -3.29144   CTCTTGGAGCCCGTC               CTCGGC ACC GCCGGG               TTCTCCACGAACTCG  59 260
QR90_RS04820  998365 ..  998393 +  -2.5  -2.74792   CCTGCCGCGCCCACA       CA-GGC-CAGGAC CGTTT GTCTTGCGCCATG       ATTTCAGCGTCGTCC  39 80
QR90_RS04825 1000111 .. 1000121 +  -8.2  -2.52464   GCGCATGCAGGGTGT                 CGGG AAC CCCG                 TCCATTGCCAGCGGC  53 49
QR90_RS04835 1001115 .. 1001131 + -10.9   -5.4387   GGCTCCAAAGATAAA              GTGTGTC TCA GACACAC              TTTTTTCGTTTCTAT 100 34
QR90_RS17085 NONE
QR90_RS17090 NONE
QR90_RS17535 1003232 .. 1003248 +  -3.7  -3.57883   CTAGCCCCAGCGTGT              GTTCGTT GGG AATGGAC              TTTACGGCCTGTTGT  51 248
QR90_RS17105 NONE
QR90_RS17110 1010048 .. 1010067 +  -2.8  -4.85782   AGTCGTTTGGCTTCG            T-CGGCGTT GGT ATCGCCGTA            TTTCTTTTTCCAGGC  79 225
QR90_RS04890 NONE
QR90_RS04895 1012521 .. 1012543 + -17.7  -2.53876   CTGTCCCTTCTCTGA           CCCGGCGCC AAATG GGCGCCGGG           TCAGTTACACTGAAC  86 45
QR90_RS04900 NONE
QR90_RS04905 NONE
QR90_RS04910 1016246 .. 1016261 +    -9  -2.87344   ATCGAGCAGCAGGTC              TAGCCG GAGG CGGCTA               TGTATGAACGCCGTC  58 23
QR90_RS16630 NONE
QR90_RS04920 1018673 .. 1018719 +  -3.7  -3.67976   AAAGGTGCTGAGCAT TCTGGGCGGCGCCTTGCTGATTA CTG TGAGCAGCG-GGA-CCGCACAGA TTTGGCGTTGATGAG  53 163
QR90_RS04930 1021503 .. 1021532 +  -5.1  -3.36289   CAAAAGTGGTCGGCG       GTGCAACGACGCTT GTA AAATGTC-TTGCAC       TTCCTTACAATGCTG  50 185
        menC NONE
QR90_RS04940 NONE
QR90_RS04945 NONE
QR90_RS04950 NONE
QR90_RS04955 NONE
QR90_RS04960 NONE
QR90_RS04965 1030625 .. 1030658 +  -4.6  -3.12999   CTGTATGGGCCGGGG    GCGGGCAG-GTTCGTG GCCT CATGACCACTGC-CGC     TTCCCTCTCGCCTGC  48 2
QR90_RS04970 1031679 .. 1031711 +  -6.9  -3.20348   CGCACATGGCAGCAC      CTAGGCACATCGACA AAT TGGAGATGTGCCGGG      TTGGGTGTTGCTGGC  53 202
QR90_RS04980 NONE
QR90_RS04985 1035831 .. 1035866 +  -9.6  -2.92921   GCTCCAGCGGGTTGC    GGGCCGGGGCGACGGCC CCT GGCTGGC-CTCTGGCTC    TCTCTGCCCTTCTGT  58 426
QR90_RS04990 1037592 .. 1037602 +  -8.2  -3.04144   GCTGGGCGAGGACAC                 GCCG ACG CGGC                 TGTTCAGGGTGAACC  57 329
QR90_RS05005 NONE
        queA 1042653 .. 1042665 +  -4.7  -2.62184   ACGTACGTGAAGACC                CGCCG TTC CGGAG                TACTCTGGGCGGCCA  42 333
QR90_RS05020 1044022 .. 1044040 +  -5.9  -5.23396   TCCTCGCTTGCGAAA             GCCTGCC AGATC GGTGGGC             TTTTTCTTGGTTGTT  87 78
QR90_RS17550 1044850 .. 1044867 +  -5.5  -2.87132   CCAAACCACTTGCCA             GAGGGCA GAAG TGCCATC              TCTGTAACAAACGCG  48 42
QR90_RS05030 NONE
QR90_RS05035 NONE
QR90_RS05040 1055743 .. 1055769 +    -5  -3.76402   GTAGGGAAGGAAAGC         GCTGGCCTCCTG ATA TGGGAGACAAGC         TTTCGTAGATCAGCT  58 37
QR90_RS05045 NONE
QR90_RS18100 NONE
QR90_RS05055 NONE
QR90_RS05060 1058745 .. 1058778 +  -7.3  -3.54475   GGACTTCACAAGTGG     GAGGAGGCCTGCCCCG GGG CGCGCCAGCCC-CCTC     TTCTATACTGGGACA  62 117
         dcm NONE
QR90_RS05070 NONE
QR90_RS05075 NONE
QR90_RS05080 NONE
QR90_RS05085 1068469 .. 1068479 +  -8.2  -2.72344   TATCCCTGCCCTGGT                 GGCG TAC CGCC                 TCGTTAAGCGTCCCG  52 293
QR90_RS05120 NONE
        scpB 1077561 .. 1077587 +  -4.4  -3.02511   GGGTGCGGCTGTGGC        CG-CTGCCCTT ACACTC GGGGGCAGACG         TGTTCCGCGCCTGCA  45 126
QR90_RS05130 1078354 .. 1078380 +  -4.3  -4.03234   GGGGACAGCGTGCTG        GTGCG-CCCGGC GTGA GCTGGGTCCCGC         TTTCTGTGACGCAAA  61 11
        aguB 1079413 .. 1079431 +  -6.6  -3.29144   CCGGCGTGATTCGGG             GGCCTGGG TAG CTCAGGGC             TTCTGAACGGCGTAG  55 120
QR90_RS05145 1082006 .. 1082022 +  -2.1  -2.59447   CAACCCGGTTCAAAT              CCTGCCC CAC GCGCAGA              CTGTTATGCTTCACA  38 76
QR90_RS17960 1082313 .. 1082331 +  -5.2  -4.46212   TCCGAAGGAGGGAAT             GGAGGCAT CAG AAGTCTCC             TTTTCTGATGCGGCA  71 138
QR90_RS05155 NONE
        leuB 1086169 .. 1086216 +  -3.1  -3.69069   TGAGAAAGCGAGATT GCGGGGACAGGAGGCGGACGGC TTCCT GCCCCGCGCC-CCGTTCACCGC TTCTGTTCCAGTTCC  54 53
         upp 1087120 .. 1087132 +  -4.7  -2.76162   TTCGGCTGACCTTTC                GCCGC GCC GCAGC                CTTTAGACTCCGGTC  44 54
QR90_RS05170 1088324 .. 1088358 + -14.2  -4.07133   CCTGGGCTGACAGCT     GGGCACCCTCCAGAAC TCT GCGCTGGAGGCTGCCC     TTCTTTCTGACGCTC  93 48
QR90_RS05175 1089362 .. 1089378 +  -5.7  -3.24747   GCGACGGCGAATACT              TGCCGCC CTC GACGGCG              TTGATGGTCTGCCGG  50 99
QR90_RS05230 1102088 .. 1102117 + -14.9  -2.78384   ATCTCTAAAAACAAA       GGGCGGCAGTTCC TGCG GGGGCCGCCGCCC        TCTGCTGCACCGCCG  75 50
QR90_RS05235 1103514 .. 1103563 + -11.3  -3.91084   GGGAGAACATCAGGC TGAAAAGTCAGAGGGGGCAGCCG ATGC TGGCTGCCCCCTCTCGCAATCCG TTTACTTCAGCGTGC  79 23
QR90_RS05245 1108152 .. 1108190 +  -6.8  -4.49644   CCGGAAACGGGACGC   TCACTTCCACTTTTGGGT CAT ACTTAGAAGTGGAAGCAA   TTTTCAATTTTTCCT  76 75
QR90_RS05250 1109402 .. 1109432 + -14.7  -3.37017   TAGCAGACCATTCGG      GGGCGCGCGGCGGG GAGA CCTGTC-CGCGCCC       TTCGTCTTGCAGGTT  82 38
QR90_RS05255 NONE
QR90_RS05260 NONE
QR90_RS05265 1112215 .. 1112243 + -18.2  -3.19246   TGTTTCTCTTGTGAA       GGCGGCCCCGGCA GTGT TGC-GGGGCCGCC        TTCCGTTAGGGTTGA  91 42
QR90_RS05270 1112818 .. 1112829 +  -2.2   -4.0274   TGGGTTAATCCATAC                G-CGG GAC CCGTC                TTCTTTCCTCCTCGC  57 84
QR90_RS05275 1113620 .. 1113650 + -14.6  -3.00259   AGCTGAAAAAAGAAA       AGGGCGGCGCGTGT GTG GTGCGCGCCGCCCG       TCTGTGATCTGTGTC  78 39
QR90_RS16640 1137259 .. 1137284 +  -2.3  -3.31792   GCAGGGCGTCCAGCG         CGGCACTCACG GCCA CGGGGGAGGCG          TTGTAAGCGTCGTCG  45 351
QR90_RS05380 1139509 .. 1139527 +  -6.6  -3.68853   AACCCGATCACGTCG             CCCTCGGC AAT GTCGAGCG             TTTCACCGTTTTTGG  61 320
QR90_RS05410 NONE
QR90_RS05415 1146812 .. 1146840 +  -4.4  -2.52464   CACCTGTCAACCCGT       CGCCCGGCCC-CG TACG CGTGGGCTGGCCC        TACCTTCCGAGCAAG  41 223
        rpsL NONE
        rpsG 1147927 .. 1147952 + -13.3  -4.18018   CCAGTGGTACCAGAC         TGGACGGTGGG GTTT CCTGCCGTCCA          TTTTAGGTGAAGGGC  89 54
        fusA 1150176 .. 1150197 + -15.1  -4.23781   GCTCTGAAAGAATCA           GGCCCGCCG TGAT CGGCGGGTC            TTTACTTTTGCTGCC 100 45
QR90_RS05435 1150704 .. 1150717 +  -8.1  -2.73364   GGTGAGATCTGGGCT               CAGGC TGTT GCCTG                TGCTTGGGCTGGGAA  54 41
         tuf NONE
        rpsJ NONE
        rplC NONE
        rplD NONE
QR90_RS05460 NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN 1157673 .. 1157685 +  -4.7  -2.78816   AAGATCGTGTCCCTG                GCCCC GGA GGTGC                TGTAATGCCCCGTCC  44 8
        rplX NONE
        rplE NONE
QR90_RS05515 1158872 .. 1158890 +  -9.5   -5.1523   AAAGTTCGGCAAACG             GCCTCCC ATTCC GGGGGGC             TTTTTGTGTTGTGCA 100 54
        rpsH 1159707 .. 1159731 +    -5  -3.34244   GTGGGCGGCGAAGTC         GTCTGCG-TGC TCTG GTAACGCAGGC          TCTGTTTCTGAGCTG  50 8
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 1163356 .. 1163389 +  -2.5   -4.4891   GCTTGCTGCGCCGCG    CG-AG-ACCGCCTGCC TGTTC GG-GGGCGGTTCTTCG    TTTTGTCCTGCTGAC  65 42
QR90_RS05555 1164102 .. 1164130 +   -11  -4.24002   GGGCAGGGCACAGGA       GAGGCCG-GGGCG CACA TGCCTGCGGCCTC        TTTTGCGCTTTGCGC  84 44
QR90_RS05560 NONE
QR90_RS16645 NONE
QR90_RS05565 NONE
QR90_RS05570 NONE
QR90_RS17560 NONE
QR90_RS05575 NONE
QR90_RS05580 1172979 .. 1172992 +  -8.1    -3.494   CCACTGTCCTGAATT               GCGGA ACAC TCCGC                TTCTCTGAGCGGTTC  63 67
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK 1174348 .. 1174376 +  -4.7  -2.57192   AGTTCCGCGCGTAGT        CTTTTTAAGAGCG TCG TGTTTTTAAGAAG        TGCGTTGAATTAAGT  43 27
        rpsD NONE
QR90_RS05610 1176186 .. 1176210 +   -10  -2.71924   CGACTAAACCATTTT         C-CGGCCTCTG GTTT CAGGGGCCGCG          CTTTGAAGGAGACTA  60 34
        rplQ 1176596 .. 1176624 + -11.6  -4.54727   TCAGACCTTTTCTGG        AACCCCCTCCGC CCGGT GCGGTGGGGGTG        TTTTCGTTTGGGGAA 100 42
QR90_RS05670 1189517 .. 1189530 +  -3.7  -3.02461   GGAACCAGCGCGTGC               CCGCC TCCA GGCCG                TCTTCCAGCGCGTTC  43 119
QR90_RS05685 1191160 .. 1191174 +  -5.7  -2.54325   GGTCTATCCTGTGGC               CCATG CGAAT CATGG               CTGTGTTTGCCCACC  46 77
QR90_RS05690 1191989 .. 1192002 +  -8.1  -5.24799   GGTTCCTACGCTCCA               CGTCC GGAG GGACG                TTTTTCTCTTTCTCG 100 82
        gatA 1203587 .. 1203604 +  -6.9  -3.17941   AATCGGCGCGGTGCG             GGCGGAG GTGG CTCCGGC              TTAGTCAGGTCTGAT  53 4
QR90_RS05755 NONE
QR90_RS05760 1206082 .. 1206102 +  -4.8  -5.00884   AGGACTTTGCGGCGC           GCGTT-AGA CTGT TCTGAACGC            TTTTTTCCGCCGCCT  83 124
       sdaAA 1207199 .. 1207214 +  -3.2   -3.6422   TGACTGGGCGGGGCC              GCACCCG TCA TGGG-GC              TATTTTACAGCGGTG  51 187
QR90_RS05795 1213198 .. 1213218 +  -2.5  -2.53382   AATTTGTGCATGATT            TGAAAGGAA GCG TCCCTATCA            TGGGTTCAGAATGCT  37 120
QR90_RS05800 NONE
QR90_RS05805 NONE
QR90_RS05810 1214291 .. 1214311 +  -9.6  -4.19238   ATCTCAGTTTCCCAG            GCCCCCGC CACCT GCTGGGGC            TTTTGACGTTCAGCG  79 82
QR90_RS05815 1215150 .. 1215171 + -10.9  -3.66378   CTGGAAGAGCAAAAA           GCCACCCGCA ACC TG-GGGTGGC           TTTCGCTGGAATGTG  73 194
QR90_RS05825 NONE
QR90_RS05830 NONE
        plsX 1217894 .. 1217915 +  -6.5  -3.87869   GGGGAAGTGCACGGC           TGGGAAGGA GGAT TCCCTCCCG            TTTCTAAGGGGTTCA  65 81
QR90_RS05840 NONE
QR90_RS05845 1220846 .. 1220859 +  -3.7  -3.32844   CCGGCAGAACCGTTA               GAGGG TTCT CCCAC                TTATGCGCTGCGAAA  48 108
QR90_RS05850 1221709 .. 1221737 +   -19  -3.82097   GGAAGGCAGCAGAAA        GGGGGCAAAGTC AGTTC GACTTTGCCCCC        TTTCCTCGGTTTGCG 100 48
QR90_RS05860 1223269 .. 1223315 +  -9.4  -4.08216   GATCATCGCGGGCGT GCAGGCCCGGCGCGGGCCGTAG CCCGA CTCCG-CCTGCGCCGG-CTTCC TTTTGCCCGCGCTCC  76 4
         era 1224392 .. 1224418 +  -7.9  -4.46615   ATCCAGACTCTTCTT         CCCCCGCCAGT CTCCT GCTGGTGGGGA         TTTTGATTGCTGCTG  81 65
QR90_RS16655 1225384 .. 1225402 +  -4.5  -4.66833   CGCCACGCCAGACGT             GTGGAGG GCGCG CTTCCGC             TTTTTAAGATTCACG  72 61
QR90_RS05875 1227036 .. 1227068 + -17.8    -4.386   CCCTGCACGGCACGA      GAACGCCCCGGC CAGATAAAA GCCGGGGCGTTC      TTTTGTGCGCGGTTA 100 41
QR90_RS05895 1231086 .. 1231108 +    -4  -3.55444   TGAGAGGATGGTTAA           GTCGGCCGAA TTC TACTGCTGAC           TTTCGGCAGTGGGCG  53 105
QR90_RS05900 1232227 .. 1232260 + -12.3  -3.01712   AGCGCGACTTCTCCC     CAGGCGCAACCCCGC TTCA GCCCGGTTGCGCCCG      TCTTCCCCGGAGGCC  68 251
QR90_RS05905 1232974 .. 1232994 +  -4.5  -3.86897   CCTGACCAGGGACAA            CGTGGGGCC AGA GACGCCGCG            TTTCTGGCCCCTGCG  58 42
QR90_RS16660 NONE
QR90_RS05915 1235196 .. 1235212 +  -5.7  -3.53012   CCAGCGGCGCTGGCA              TCGCCCC CCA GCGGCGG              TTTGAACCCCCGCAG  55 105
QR90_RS05925 NONE
QR90_RS05930 1238445 .. 1238473 +  -8.8  -4.13654   CATTTCAAAGTCAAA       CTGCCAGGGTCGC CCGT GCGCTCC-GGCAG        TTTGTCCTTTGGCCC  76 64
QR90_RS05935 NONE
QR90_RS05940 1241243 .. 1241267 + -15.1  -3.39556   TCATCGGCGCCGTCT          TGGTCAGCATC TGC GATGCTGGCCA          TCTTGTTGAGGCATT  85 59
QR90_RS05960 1244710 .. 1244722 + -10.5  -2.78384   GCTGCAGGGCTGGCG                CGGGG GTG CCCCG                TCTCCTCGGGGGCCG  56 76
QR90_RS06005 NONE
QR90_RS06010 1254512 .. 1254523 +  -7.2  -3.01791   GAAGGCCATACGTCC                GGCG AAGT CGCC                 TGTTCCCCGCACACT  54 39
QR90_RS06015 1255278 .. 1255335 + -12.7  -2.78371   CTGGACGTCGTCTGA CGCCGCCCGGCTAGGCCTCGGCGTC CTCATCCTCT GTCGCCGGGGCC-A-CCGGGTTGCG GTTCTTGCCGATCTC  68 467
QR90_RS06045 1262354 .. 1262411 +  -2.7  -4.59773   GCGGGTGGTGGTGCG GCCAGCGGC-TGT-CTTCTTCGTCG-CT GCCGG AGCCGACGTTGAAGTACGCGCCGGGGGC TTTTTCCAGATAGGC  71 393
QR90_RS06060 1265572 .. 1265595 +  -5.8  -3.63515   CAAATCTGCACCGAG          GCGGGCGCAG CCCC CGGCGCCTAC           TTCTTGCAGGTCAGG  57 42
QR90_RS06070 1267349 .. 1267362 +  -2.3  -3.64703   GCCGCGCCTACCCTC               GGGGC ATGA GTCTC                TTTCCCTGGCAGGCC  49 91
QR90_RS06075 NONE
QR90_RS06080 1268520 .. 1268536 +  -2.1  -3.44527   TCCAGGCGGATTCGG              GCGTGAG GGA CGGACGC              TTGTCATAGTGGGTC  47 96
        gdhA 1270335 .. 1270345 +  -6.8  -3.30124   ACCTTGGGATGCGCC                 CTGG AGA CCAG                 TTCTCCCAGGTCCGG  52 370
QR90_RS06095 1271637 .. 1271668 + -10.8  -3.05384   TGGAGTATGCCGCGC      CGTAGGCGCTGGCCG CCG CGCCCAGCCCCT-CG      TTCGCTGCCGCCCGC  62 394
QR90_RS06115 NONE
QR90_RS06120 NONE
QR90_RS06125 1277779 .. 1277807 + -21.8   -3.3858   ATGTCAGGAAGAACA        GAGGCGGCCCTG CAAGT CAGGGCCGCCTC        TTGTGAGGTTGCTTT 100 55
        tsaD 1281855 .. 1281883 + -13.7  -4.89852   GCGATTGCAGGCAAA        CGCCCCCGCACCG TCA TGGGCCGGGGGCG        TTTTTCTGGCTGTGC 100 266
QR90_RS06155 NONE
QR90_RS06160 NONE
QR90_RS06165 NONE
QR90_RS06170 NONE
QR90_RS06175 1286716 .. 1286742 +  -6.4  -3.06492   AATAGGCCATCAAGA         CGGGTCCCGTCG CCC CGATGGAGGCCG         TGTTAGCCTCCCTGC  51 196
        purB 1288297 .. 1288307 +  -3.2  -4.57569   CACCAGTCATCAATG                 CGGT GGA ATCG                 TTTTTCGGAGCATCG  72 257
QR90_RS06185 NONE
        panC NONE
QR90_RS06195 1291036 .. 1291046 +  -4.6  -3.40522   CGTCAGTGTAAGCAA                 CGGG TTT CTCG                 TTCTCGTACCCCGGT  53 155
        ugpC 1292412 .. 1292440 + -14.6  -3.39327   GAGATACAAGTCAAA       GGGCCGGACGCGT TATT GCGC-TCCGGCCC        TTCTGAATATCGGGG  82 46
        typA 1296801 .. 1296828 + -14.9   -3.7108   GAGTCCACAGCGAAA        GCCCCCGCGTCC CTCAA GGA-GCGGGGGC        TTTCGCTGTGCAGGT  88 62
QR90_RS06245 NONE
        secG 1306166 .. 1306199 +  -9.5  -4.25848   ATTGTCGCCCCCCAG     ACCCAGAAGCACCTC GCGA GAGCGGCTTCTGGGC      TTTTCATGGAAAATT  83 40
QR90_RS06275 1308221 .. 1308251 + -17.6  -2.74183   GCCACGTTCGTTTCA       GGGGGTGGTCTGCT ATG GGCGGACTACCCCC       CTTACTTTGAATTCT  84 45
QR90_RS06280 NONE
QR90_RS06285 NONE
QR90_RS06290 NONE
QR90_RS06295 1312606 .. 1312629 + -11.7  -4.54821   CGCTCGCCTGTCGAA          GTCCGCTCC TGTCAC GGGGCGGAC           TTTTCTAATTCCCGT 100 43
QR90_RS06300 1314015 .. 1314050 + -20.5  -3.40299   AGTCAGCAGCAACAG    CATCGCCGCCGGAGC AATGGC GCTCTGGCGGCGGTG     TTGTGGATCTGGTCA 100 53
QR90_RS06340 1324084 .. 1324094 +  -2.4  -3.28712   CTGAGCAAGGGCTGA                 CCGG CCG CCAG                 TTCTCCGAGAGCCCG  45 190
QR90_RS06375 1332516 .. 1332532 +  -5.1  -3.06312   TCACCCCCAAGGGAA              GAGAGGA AAA TGCTCTC              TTCCCTCAGACCTTT  47 148
QR90_RS06380 NONE
QR90_RS06385 NONE
QR90_RS06390 NONE
QR90_RS06395 1335720 .. 1335730 +  -5.4  -3.86346   AAATAATCAGACCTC                 CGAT GGA ATCG                 TTTGTAAAACGATGG  60 35
QR90_RS06405 1337566 .. 1337607 + -20.5  -2.90392   CTAGAGCAGTTGTCC GAATGGAGGCATCAGAA CAGAAGAC TTCTGATGCCTCCATTC  TCTCCTTCGGAGCTG  93 37
QR90_RS06415 NONE
QR90_RS06420 NONE
QR90_RS06425 1340682 .. 1340709 +    -2  -2.71011   GCCCTCTCTCGGGGG       TGGACGGCGCGG GATAGA CTG-GCCG-CCA        TGATTGGAAAAACGT  39 48
         pnp 1342907 .. 1342939 + -16.3  -3.71848   CCTTCTAGTTTTACA      ACCCCCCCTCTCC ACTGACA GGAGAGGGGGGGG      TTGTTACTGCGGCCC  93 55
QR90_RS06450 1347330 .. 1347345 +  -4.6  -3.43773   ACAGCCTCCCTGCGC              CCGGTG GATG TGCCGG               TGTTTACCTCTGCGG  53 46
QR90_RS06465 NONE
QR90_RS06470 1351650 .. 1351680 + -16.9   -4.1552   CAGGGGGAGACGAAA       GCGGCGTGCGG AGACAGGGA CCGCACGCCGC       TTTCTTGACGGCATC 100 43
QR90_RS06480 1353506 .. 1353536 +   -12  -4.20868   ATGTGACCTTCCCCG      GACGTTTCCTGGC TAGACT GCC-GGAAACGTC       TTCTTGTTTTCCGCC  86 61
QR90_RS06485 1355134 .. 1355155 + -11.6  -3.83568   AGTGGAATGGAAAAA           CCCTTCCC AGCGTC GGGAAGGG            TTCTTCTGAGTCTCA  81 63
QR90_RS06495 1356929 .. 1356946 +    -7  -3.32844   CTCGTCCCGGAAGGC             GGCAGA CGGCCT TCTGCC              TTCTGCCCTCCGCCA  55 44
QR90_RS06500 NONE
QR90_RS06505 NONE
QR90_RS06510 1359334 .. 1359350 +  -2.2  -3.24411   ATTCTCATTTCATGC              CCCC ATAAGTTCA GGGG              TGTGTTTGACGCCCT  43 123
QR90_RS06515 1359996 .. 1360009 +  -4.5  -4.93296   GATTCCTCCACTCCA               CGTCC GGAG GGATG                TTTTTCTCCTGCTCG  77 97
QR90_RS06525 NONE
        proS 1364271 .. 1364306 +   -14  -4.60797   CCAGGGGTTTGGGAA    GTGGGCTGGAGGCTGT GGGA AAAGCCTTCAGCCCTC     TTTTCTCTATCCCCC 100 41
QR90_RS06535 1365614 .. 1365630 +  -5.1   -3.4252   GCAGTTCGCGGTTCT              GCTGG CTGTTTT CCAGC              TTGTCCTCAATCACG  52 479
QR90_RS06555 NONE
QR90_RS06560 1369460 .. 1369475 +  -2.5  -3.04517   CGCGCGGGCTATGAA              CTTGG AGGCGG CCAGG               GTTTTGGGGGAGAAT  41 27
QR90_RS06565 NONE
QR90_RS06570 NONE
QR90_RS06575 1372023 .. 1372041 +    -3  -3.57144   CGCTGCCGTCCATGT             CCCCCTCA AGT TCAGGAGG             TTTCAACATGCCCAC  51 143
QR90_RS06580 1373245 .. 1373264 +  -2.7  -2.76696   CCTGAAACTGGCTCA            GCAGGGC AAGTAG GTCCGGC             CTTCTTCCGCGCGCC  39 13
QR90_RS06585 1374137 .. 1374153 +  -4.3  -3.62224   CTGGCGAAAATCAGG              CCCTTTC TTG GGTAGGG              TTCTTGGCAGCCTCT  53 11
QR90_RS17580 1381601 .. 1381615 +  -2.7  -4.62069   GTCTGATTCACGCGC               CCGCC CACCC GGAGG               TTTTTGACATGACCA  68 59
QR90_RS06610 NONE
QR90_RS17975 NONE
QR90_RS06615 NONE
QR90_RS17585 NONE
QR90_RS06620 NONE
QR90_RS06625 NONE
QR90_RS06630 NONE
QR90_RS06635 NONE
QR90_RS16665 NONE
QR90_RS06645 NONE
QR90_RS06650 NONE
QR90_RS06655 NONE
QR90_RS06660 NONE
QR90_RS06665 NONE
QR90_RS06670 1388611 .. 1388624 +  -3.7  -3.16191   GATACTTCCCAGCTT               CGCGG CCGA CGGCG                TTGCTGCACATCTCG  45 87
QR90_RS06680 NONE
QR90_RS06685 1389729 .. 1389742 +  -9.5   -5.4833   AACCCAAACTGATGC               CGCCC TCCG GGGCG                TTTTTTATTGCCTAG 100 69
QR90_RS06695 1391209 .. 1391225 + -10.8   -4.8622   CCCGTCCACACCCTG              CCCCGC GATGA GCGGGG              TTTTTCATTGCCCAC 100 48
QR90_RS16670 NONE
QR90_RS06705 NONE
QR90_RS06710 NONE
QR90_RS17590 NONE
QR90_RS06715 1396454 .. 1396467 +  -3.1   -2.5294   ACCACCATCACCACC               CTCTT AGCA AGGAG                CTGTTATGAAGAATC  39 54
QR90_RS06720 1396859 .. 1396885 + -11.6  -4.07868   CGTTTAGACACCATT        CGGCCC-CAGC CTTTGC GCTGCGGGCCG         TTTCTCTGCCTGTAG  83 46
QR90_RS06725 NONE
QR90_RS06730 NONE
QR90_RS06735 NONE
QR90_RS06740 NONE
QR90_RS06745 NONE
QR90_RS06750 NONE
QR90_RS06755 1401024 .. 1401043 + -10.7   -4.4767   GCAGTTCAATCCAGA            GGCCAGC CGCTGC GCTGGCC             TTTTCTGCTGCCTCC  95 42
QR90_RS06765 NONE
QR90_RS17150 1402716 .. 1402743 +    -9  -3.05596   CCTGTGGTGGCCCCG        GCGCCGGCGGAG AAGT CTCTGCCCCCGC         TTCCATCCGAGCCTC  60 503
QR90_RS06775 NONE
QR90_RS06780 NONE
QR90_RS06785 NONE
QR90_RS06790 NONE
QR90_RS06795 1416238 .. 1416250 +  -6.9  -2.78935   CCACACTGGCGGAAA                GCGTG ATT CGCGC                TCTGCTGGCCCGTCT  49 20
QR90_RS06800 NONE
QR90_RS17595 1417259 .. 1417276 +  -4.9  -3.87641   GTTGTAGAACTCACC             GACCAGCA GCA TGCTG-TC             TTTGTCGGCGGTCTT  60 314
QR90_RS06810 NONE
QR90_RS06815 1418509 .. 1418533 + -14.2  -5.24531   ACCTCTATGTCACTT          CCGCCCCGGC ACTAG GCGGGGGCGG          TTTTTTATCCAACAT 100 44
QR90_RS06830 1422119 .. 1422129 +  -2.4  -3.45023   GACGGCGGGTCTCTT                 GAGG TGG CCCC                 TTCTGCTCCTGCTCA  47 24
QR90_RS06835 NONE
QR90_RS06840 NONE
QR90_RS06845 1423361 .. 1423371 +  -2.4  -2.58861   AGGTGGCTGAGGGAA                 GCAC GCA GGGC                 GTTGTGAACCTGGTC  38 31
QR90_RS06850 NONE
QR90_RS06855 1424359 .. 1424382 +  -5.1  -3.93288   CGCCCGTCACGCCAC          CAGGCCCGC CATCGT GCGGGCCGC           TTTCATTCCCTGGAG  60 45
QR90_RS06860 NONE
QR90_RS06865 1425628 .. 1425667 +   -12  -5.00138   GACAGGCGATTGACT  GCCCCCACCTCCCTGTAC TTCG GCGTGGGCGGGTGGGGGC   TTTTTCGTTTCAGTC 100 48
QR90_RS06880 1428930 .. 1428947 + -14.1  -3.13432   CGCAGCATAGGAGGA             GGGGGCC TGTC GGCCCCC              TTCCGTCGTGTTGCG  76 47
QR90_RS06885 1429989 .. 1430004 + -10.4  -4.72846   CTTCAAGGACTCAGG              GTGGCC TTCG GGCCAC               TTTTTCCATGTCTCG 100 90
QR90_RS06890 1430305 .. 1430337 +  -6.1  -2.78715   AGGACACCCCGCCTC      AGGACTGCTCAGCCC AGT GGACTGAGCTCTCCC      TGTCATGCAGCAGTT  46 1
        surE 1432405 .. 1432420 +  -6.8  -3.15579   CGAGAGGGTCACCGG              CAGCGG CAGG TCGCTG               TTGGTGCGGCGTTCG  50 507
        truA NONE
        murA 1439610 .. 1439642 + -17.1  -3.40403   AACTTCCACCCAAAA     GCGCGCCCGACTTC GATGGA GAAG-CGGGCGCGC      TTGTCATGGCCACGG  93 40
QR90_RS06960 1444590 .. 1444606 +  -3.6  -3.54424   GGGCCGCGCTCCACC              AGCGTG TCGGC CACGCG              TTTGAGAGCCTCGCC  51 378
QR90_RS06970 1446006 .. 1446032 +  -4.2  -3.84406   TGCAGCCAGCCGCCC         TCCAGCGCCCGC CGG GTGGCCGCGCGA         TTCTTGTAGTAGCCC  58 425
QR90_RS06980 NONE
QR90_RS06985 1450199 .. 1450210 +  -2.2  -3.61715   CCGCCCCAGAAGGAG                GTCT GAGT GGAC                 TTATTACCGCAACTG  49 88
QR90_RS06990 1451128 .. 1451178 +  -5.6  -4.14392   TGTCTAAGGGTCAAG GGTCTGAGGGTCTAAGCACAG CCCCCGCCCT CT-TCCTGAGACCCTTAGACC TTTTGACCCTTAGAC  67 52
QR90_RS06995 NONE
QR90_RS07000 NONE
QR90_RS07005 1454610 .. 1454631 +  -2.9  -3.91897   GCTCTGATTCCCGAA           CATCCGG GAACCCCA CCGGAGG            TTTGTCCATCGCCGC  56 50
QR90_RS07010 1455995 .. 1456014 +  -5.7  -3.33509   TGTGGGGCAGCCGTG            CCTGACT TCACCC GGTCAGG             TTGGATTGTTTGGCC  52 65
QR90_RS07015 1457319 .. 1457338 +  -2.8   -4.2461   CTGACGTCGCGGCGG            TGGCCC AGTTCAGG GGGTCA             TTTCTTCGTCGGCGT  61 37
QR90_RS07050 1465346 .. 1465375 + -17.9  -3.05343   ACCGGTCAGACGAAA       GCCGCCTCGCC ATGCACCC GGCGAGGCGGC        TCTTGAAAATGTGGC  90 43
        gatC NONE
        serS 1470751 .. 1470778 + -11.2  -4.11751   TCAGAAATAGACGGT        GGAGGCCGGGTC ACTT GATCCGGCCCTC         TTTTCACGCCTTGAT  84 57
QR90_RS07080 1471383 .. 1471420 +  -3.3  -3.08371   GTCAGGGCGAATGCA   GCGCCGCAGGTGGGGTCA CAT TGACC-CGTCTGCCCAGC   TATCTTCACCGTATG  43 2
QR90_RS07085 NONE
QR90_RS07090 NONE
QR90_RS07095 NONE
QR90_RS07100 1475310 .. 1475352 + -11.2  -3.21912   CGGGGGCAACGAAAG GGGAGGAAGAGGGAGCCAGA TTG TGTGCCCTCCGCTTCCTCCC TTCCTGAATTGCCGA  67 155
QR90_RS07110 1478132 .. 1478160 + -17.5  -4.03413   ACGCTGCAGTGTTGA        GGTGGACGGGC GAGGGCG GCCCGTCCACC        TTTCTGTGGGCGCGT 100 43
QR90_RS07115 NONE
QR90_RS07120 1481121 .. 1481153 + -13.5  -4.44667   TCTCCCGCCCAAGAA      GAAAAGTCCCCGC ACCTGAC GCGGGGACTCTTC      TTTGTTGTTGAAAAG 100 58
        recN 1486340 .. 1486351 +  -3.6  -3.53012   ACTAAGGCCCCTTGG                CGCG CATG TGCG                 TTTGCCCAAGGCCGG  49 36
QR90_RS07140 1487531 .. 1487561 + -15.5  -2.57132   GACAAGTTTAGGCGT       GCGGGGCTGAC GGTCCCTGA GTCAGCCCCGC       CTTCTGCCGGGCACG  77 68
        recF NONE
QR90_RS07155 1490157 .. 1490170 +  -2.3  -4.05033   AACCGGAACAGGGGA               GACGG GCCA CCGTA                TTTCTGTCGGCTGGG  57 43
QR90_RS07160 1490999 .. 1491018 +  -3.4  -3.54459   CCGATCTTCCAATCC            GTCCCGCC CGCA GGCGATAC             TTTGAGCCGGGTTGG  51 81
QR90_RS07165 NONE
QR90_RS07170 NONE
QR90_RS07175 NONE
QR90_RS07180 1493992 .. 1494024 +  -8.3  -5.31877   CTCGTGGGGCGTTGA      CCGAATCTGGGGC CATTACA GCCCCTGGTACGG      TTTTTTCTCCTGGCT 100 150
QR90_RS07185 NONE
QR90_RS07190 1495901 .. 1495932 +   -13   -2.9696   TCAACCTCGCTTTTC      GCGCCGCCCAGA CCCCGTAT TCTGGGCGGCGA       TGTCTGCTCCTGCTT  71 59
QR90_RS07195 1498406 .. 1498422 +    -3   -4.2828   GTAAATGTTGCCTAG             CGGCTGT GAGT ACA-CCG              TTTTGGTGGCTCCGA  65 322
         pgm NONE
QR90_RS07215 NONE
        murJ 1503526 .. 1503550 + -15.7  -3.63515   ACCACCTCCTTTGAA          GCGCCCGGAGT GCG AATCCGGGCGC          TTCTTCACGCTCGGA  86 245
        topA NONE
QR90_RS07235 1507806 .. 1507822 +  -6.5  -3.60475   CCCTTGTTGGCCTTT              GCCGC TTCCTTC GCGGC              TTTGGCCTCCGCCTT  57 115
QR90_RS07245 NONE
QR90_RS07250 1510231 .. 1510245 +  -2.7  -2.78596   TGACCCTCAATCTGG               CGGCG CCGAA CACCG               TATCCTGAACGGATG  39 95
QR90_RS07255 NONE
QR90_RS07260 1512001 .. 1512013 +  -4.7  -3.90112   AGGTTGGCATGGGTG                GACGC TCT GCGCC                TTTCCTTCCAGACGA  60 40
QR90_RS07265 1514117 .. 1514153 + -16.6  -3.82083   GTAAACCTCTGTGTC    GGCCCTCCGGCTCC CCGTGAAAA GGGGCTGGAGGGCC    TTTGCGTTATCCTGC  93 37
QR90_RS07270 1514710 .. 1514745 +  -2.4  -3.28497   AAGTGAATTTTTGTC    GGCTGGGCGCGAGA TGGGGTTT TCGGGCGCTCAGGC     TTGCGTTTCGCGTGG  45 71
QR90_RS07275 1516250 .. 1516265 +  -2.4  -3.53091   CCGGCCTGATGCGCT              GACCGG GTGC TCGGCC               TTTCGGCCGACCGCT  47 24
QR90_RS16685 1528331 .. 1528341 +  -2.4  -4.57073   CGCGCCATCACACCC                 GGCC AGG GGCG                 TTTTTGCAGCGGGTG  68 273
QR90_RS07335 1530487 .. 1530501 +  -2.8   -3.7282   ATCCGCATGTACGTC               TGCG CGCCCAC CGCA               TTCTTGCTGCACTGC  53 413
QR90_RS17605 NONE
QR90_RS07345 1535703 .. 1535715 +  -5.5  -3.37522   AGAAATCTTCGACGA                TTGGG CTG CCCGA                TTGCTTGGATCGGAT  52 109
QR90_RS07350 1536884 .. 1536911 + -11.4  -3.26319   GGGAGGTGGAGACGT        GGAGGCCA-CATC AGG GATGCTGGTCTCC        TTGCTATGCCACGTT  69 84
QR90_RS17170 1538248 .. 1538267 +  -2.9  -3.14564   CTAGACGTATATAGA            CAC-CAGA ATTAA TCTGTGTG            TTGATGAAAGCATAG  44 58
QR90_RS07370 NONE
QR90_RS07375 1542113 .. 1542137 +  -3.5  -2.63596   GGGTCCTCCACCGAA         GGAGGGACGC TCGCCC GCG-CCCTGC          TGCTCTAGAGTGGGG  39 53
QR90_RS07380 1542932 .. 1542973 + -14.3  -4.95155   GCTGAACCGTTGAAG TGGGGTGGAGGGTGGGTCC GGAT GGGCCGCCCCTCTGCCCCG  TTTTTCTGCTCTGGC 100 42
QR90_RS07385 1544873 .. 1544886 +  -5.2  -2.58544   CGGTCTCCGCCTCCA               GCGG CCTGTC CCGC                CTTATACCCCTGACG  43 45
QR90_RS07390 1546765 .. 1546793 + -21.8  -2.74012   AGCGGGAGGAAGAGA        GGCGCGCATCCC CACAC GGGATGCGCGCC        TCCTTCGCCTGCTCC 100 49
QR90_RS07400 NONE
QR90_RS16690 NONE
QR90_RS07410 NONE
QR90_RS07415 1553576 .. 1553606 +  -7.5  -2.52795   GCCAGCGCCAGCAAT      GCCAGCACGCG-GGC CGG GCTGCGCG-GCAGGC      TGCGTTCCAGAGCTT  50 106
QR90_RS16695 1555872 .. 1555897 + -15.4  -4.72272   CGCAGGTCTGTCTTT         CCCCGCCCCG CTGGAA TGGGGCGGGG          TTTTTGCTGGACAAA 100 44
QR90_RS07435 1556820 .. 1556833 +  -3.7  -3.00946   GGATGCTGGCCCACT               GCCAC TTGA GCGGC                TGGTTTCTGACGGGC  45 76
QR90_RS07440 1558311 .. 1558353 + -14.2  -3.06261   CACATTCCGTTCAAA GCAGACAGCCCCCG-ACTC CGTGGC GAGTGCGGGGGCGCTCTGC TGTTCAGGCTTCAGC  78 208
QR90_RS07470 1562853 .. 1562863 +  -3.2  -3.30007   CCCAGCTTCCTCATC                 TGCG GCC CGTA                 TTCTGCGGCCATGTT  46 55
QR90_RS07475 1563378 .. 1563412 +  -2.3  -3.59946   CGCAGTTGTCCGAAT    TGCA-GCATCAGAA AAGAAGAC TTCTGATGCCTCCA     TTCTCTCCTTCGGAG  49 41
QR90_RS07485 NONE
QR90_RS07490 NONE
QR90_RS07495 NONE
QR90_RS07500 1568691 .. 1568723 +  -6.9  -3.06183   GGGACGGCCTCGCGC      CGAGAGTGTAAGTTC TCC GCCCTTGCACTCCCG      TTCAATCCGAGTAAA  51 15
QR90_RS07505 NONE
        feoB 1571207 .. 1571222 +  -4.6  -2.78463   TTCCTCGTGTATCAG              GTGGCC GTGA GGCTGC               TGTAATGGCCCCGCT  44 5
QR90_RS07515 1571868 .. 1571889 +  -2.1  -3.28791   CCCCATCGCGAGGCG           GTACGGCAG GTAG TTGCCGGTC            TTGTGCGCGGCCAGT  45 382
QR90_RS07530 1574736 .. 1574768 +  -3.2  -2.83566   GGTGCGCCCCTCGCC     GTGTCGGCTGAGCGG ATCC CCGCGT-GCCGTCCC      CTTTGCGTATCCTGT  42 79
QR90_RS07535 NONE
QR90_RS07540 1576638 .. 1576651 +  -3.7  -3.14344   GCTAGCGCGGGCCGA               CACCG CCCC CGGGG                TTACTGAAGGCCATG  47 36
QR90_RS07545 1578452 .. 1578468 +    -5  -4.56597   TAGGCGGGTGGACGA              ACGCGG AGCGG CCGCGC              TTTTTCGCCGCCCAC  74 38
        ftsY 1579569 .. 1579603 + -11.4  -4.44245   ATAGCTGGCGCTCTG    TGCCGCCCCCGCGTC TGATAC GA-GCGGAGGCGGCG     TTTTCTGCCTCCTAT  95 62
QR90_RS07565 1582836 .. 1582863 +  -7.6  -2.88544   GGCTAAGGACCGGGA        CGCGAGGCTGGG ACGG TTCAGCCCTGCG         TGTCTGCAAGTGCCG  53 35
QR90_RS07590 1586273 .. 1586287 +  -5.6  -3.30124   CACAGCGACAGGGAC               GGGCAG ACT CTGGCC               TTCTGGCACCTCCAA  49 240
QR90_RS07605 1589934 .. 1589983 +  -3.4  -3.59946   AACGCGAATTCAATC ACGGCAGTTCTGGTCTGTGCCGA ACCCA TCGGCCCGGTCTGGCA-TGCCGC TTCTCTCCTTCGCGC  51 101
QR90_RS07610 1591814 .. 1591853 + -11.5  -3.83502   GCGGTAGCGGCTGGG  CAGGGCGTTAC-GGCGAA GAGGG TTCGTCTGTAGCGCCCAG  TTTCATGTGGGCCTC  79 178
QR90_RS07630 1596670 .. 1596690 +    -6  -3.96148   AGCGCCGCGAGGGGT            CCCCTGGC CGTCA GCCGGGCG            TTTATAGTGGGCCGC  62 75
QR90_RS07635 1598556 .. 1598570 +  -2.8  -3.85698   CGTGGAGTGTGGAAA               TCGG AGCTGTC CCGA               TTTCTACACGAAACA  56 281
QR90_RS07640 NONE
QR90_RS07645 NONE
QR90_RS07650 1600147 .. 1600180 +  -5.1  -4.51812   CCAGGCGGCTGTTCG     GCCCCATCTGGGTGCC GTG GGCGGCCAGC-GCGGC     TTTCTTGTTCTCACG  72 232
QR90_RS17615 1601439 .. 1601449 +  -2.4  -3.72576   GCGCGGTAAAAGCGG                 CTGC CCT GCTG                 TTTCATCGCCAGCGC  53 122
QR90_RS07665 NONE
QR90_RS07670 NONE
QR90_RS07675 1603249 .. 1603273 +  -4.9  -4.50058   CTTCTGGATGTTCTC          CTCGGTCAGGA AGT TCTTGCCCCAG          TTTTCCTTCTCGGTC  72 314
QR90_RS07690 NONE
QR90_RS07695 1606690 .. 1606717 + -13.4  -4.60073   TGTTGAGCAAGCAGA        TGGGCCGCCAGA GCGT TTGGGCGGCCCA         TTTTCTAATTCTCTG 100 43
QR90_RS07700 1607649 .. 1607659 +  -8.2  -3.01712   GCAATTCTTCGCGCG                 CGGC GCT GCCG                 TCTTCCAGGACCAGC  55 439
QR90_RS07715 1610573 .. 1610589 +  -6.5  -3.83026   CCGCAGGCGACACCT              CATACGG ATT CCGTTTG              TTTCGTGTAGGAACC  65 127
QR90_RS07770 1622030 .. 1622056 +  -4.3  -3.04322   CCGACAGTTGCCGCC        CGCC-CTGGAAC AGTC GGCCCAGAGGCG         TATTCAGCCCTTCGG  43 374
QR90_RS07805 1628506 .. 1628522 +  -5.7  -4.65895   AAGAGCCGGGAGGCA              GGACGCG GTG CGCGGTC              TTTTTCCATCAACCA  76 67
QR90_RS07810 NONE
QR90_RS07815 NONE
        lysW 1629756 .. 1629788 + -14.1  -3.73968   CCCTCTGTCGGCATC      TGGCGGTCAGCGCAG CCC TTGCCCTGGCCGCCG      TTTGCTGGAGGCTTT  84 42
        lysX 1631110 .. 1631124 +  -2.7  -4.56597   ATTGCCGCCCGCTAC               GGCAG CGTGT CCGCC               TTTTTCCGCCCCGAG  68 427
QR90_RS07850 1638110 .. 1638146 +  -4.9   -4.4009   CGGCAGGCTGGCCGT    CACGATGTAGGTGCCGG TGC CCGTCGCCTTCCCTGTG    TTTTGTACGGTGACG  72 469
QR90_RS17620 1650248 .. 1650279 + -16.6  -4.23999   CCTCAACCTTCCCGC      CACCGCCCCCTTCG ATCC TGAAGAGGGCGGTG       TTCTTTTGGGTGTCC 100 49
QR90_RS07915 1654109 .. 1654127 +  -5.2  -4.03995   TGACTGACTAGACTC             CGGGGG TGACCTC CTCCCG             TCTTTTTCTGGCCCG  63 38
QR90_RS07920 1654736 .. 1654749 +  -5.3  -3.25823   CGATCTAGAATTATC               GTGAA TCAT TTCAC                TTACTATAAACCCAG  50 57
QR90_RS07930 1656966 .. 1657002 + -22.4  -4.23281   GAGCGGTGATACGGG    CGAGGGGACGCGGC ACAAACTTA GCCGCGTCCCCTCG    TTTCTGTTGAGTCTT 100 39
         rho 1662537 .. 1662556 + -10.6  -3.27475   CTGCAGAATCTGGCG            GGCGGCTG ACGC CTGCCGCC             TCTTGTGATCCGGAG  66 17
QR90_RS07950 1663969 .. 1664005 +  -4.4  -2.83715   CGCCTCACCGTGACG   TTCA-C-GCCGTGACGGG CCT CCCGCCGCGCCCGCTGAA   TCTGCTGGTGGTCGA  44 42
QR90_RS07955 1664454 .. 1664466 +  -4.7  -2.78596   GGCCCTATGTGTGGG                GGCAG TTG CGGCC                TATGCTGCGGCCATG  44 62
        pdxS NONE
        pdxT 1666260 .. 1666316 +  -6.1  -3.49568   GCAGTTCCAGTTCGC CCCGGTCCATGTGGCCGCGCAGTTCGC CGT GCGTGCCGAGCAGCTTGAGGGTCCGGG TGTTGTTGTGCGTAA  55 294
QR90_RS07995 1672249 .. 1672287 + -15.4  -2.90212   TTTGAGCTTCTGACA  GGGAAAGGGGGCGAGCC GTTCCA GGGT-GCCCCCTTTCCC   TGTGTCGGCTGCTAC  79 36
         lnt 1674846 .. 1674876 + -11.1  -3.76534   CGTCCGCCATAGTTG      CGCCCGCTCAG-TG ACAC CAGCAGGGCGGGCG       TTTCCAGTTTGTTCA  74 301
QR90_RS08025 1677555 .. 1677589 + -14.3  -3.23585   TAGTCCTGCTCGCCT    GGGGCCGCC-CTTCCA GAAA TGGGGGAGGCGGCCTC     TTCCCTGTTGTGTCT  80 38
        hisS NONE
        aspS 1680743 .. 1680770 +  -2.8  -4.40804   ATCAGATAGTGAATA        GTTTCACGAT AAATTCAG ATCGTGAAAG         TTTTATGCACTAATG  67 74
QR90_RS08075 1688155 .. 1688171 +  -2.1  -4.26076   TAGAGTTGAGCTTCA              CCCCCTC AAG GAGATGG              TTTTAATGACGATGG  62 479
QR90_RS08085 1688711 .. 1688734 +  -3.9   -5.5074   CTATTAGTGAAAGTA          TTCACGATA TTACTT TCTCGTGAA           TTTTTTGTTCGATTC 100 98
QR90_RS08110 NONE
QR90_RS08115 1696825 .. 1696837 +  -3.3  -3.01712   TCCTCGGCCAGCAGG                CGCAC GTC GTCCG                TGTTGGCGACGCCGC  43 107
QR90_RS08125 NONE
        asnS NONE
QR90_RS08135 1701014 .. 1701040 +    -5  -3.14132   GACTGCGGGCTGATG         CGGAAGCCGC CGCCGTA GCGGGTGCCG         TTCATCACGGCGACG  47 319
        rsmA 1707348 .. 1707360 +  -3.3  -4.28432   GTTCTCAACACGGGG                CCTGC CCC GGAGG                TTTTCCCTTGAAGTT  64 147
QR90_RS08165 1708337 .. 1708373 + -14.4  -4.96848   CTGCGTGGGAGGCAA    AAGAGTGACCGGGGCG AAAAC TGCCCCGGTCACTCCA    TTTTTGTATCGCGCC 100 47
QR90_RS08175 1709989 .. 1710011 +  -6.2  -3.54424   CGCCCAGCAGCTCGG           CGCTGTATTC GCG GAAGGCGGCG           TTTACGCGGCTGAAG  57 483
        hmpA 1716760 .. 1716787 +  -9.9  -4.07568   GCCGCCCACCCCAGA        GAACATCCGGT CAGGAC GCCGGGTGTTC         TTTTGCCCGCAGACC  78 66
QR90_RS08205 1717435 .. 1717466 + -15.9  -3.97812   TTTAGAGAGACGAAA      GAGGCCGGGCG TGGATGGAAC CGCCCGGCCTC       TTTCCTATTCGTTCT  95 219
QR90_RS08225 NONE
QR90_RS08230 1720946 .. 1720965 +    -7  -3.63991   TGCCGGCTTCACGGC            CGTCCACG AACA CGCGGGCG             TTGTTCACGCTGCTG  60 248
QR90_RS08240 1723144 .. 1723156 +  -3.3  -3.02144   CACGTACACCTTGGC                CGTCG CGG TGGCG                TCTTCCAGCGCGTCG  43 97
        fdhF NONE
QR90_RS08260 NONE
QR90_RS08265 NONE
QR90_RS08270 1730608 .. 1730643 + -23.4  -2.79183   AGACCCTACGGGAAA    TCGGCACGGCTCTGGG ACCA TCCAGAGCCGTGCCGG     TGTAGTGACAGTGCC 100 205
QR90_RS08280 NONE
QR90_RS08285 1732707 .. 1732722 +  -7.5  -3.05384   CGTCTGCTAGTCTGC              GCCCC GCTGAG GGGGC               TTAGCTCAGCGGGAG  54 165
QR90_RS08290 1732795 .. 1732820 +  -9.7  -5.16132   AAGCCTCCACCAAAG         AAAGGACGTCG TTTA CGGCGTCCTTC          TTTTCTTTTGGTCTC 100 29
QR90_RS08305 1735511 .. 1735526 + -11.8  -3.26813   CTGAAAGTCGCGATA              CGCGCC GTCA GGCGCG               TTCATCCTCTGTCCT  72 142
QR90_RS16715 NONE
QR90_RS08355 NONE
QR90_RS08360 1749623 .. 1749636 +  -8.1  -3.35679   CGCCTTCAGGGCGTC               CCGGA CGCA TCCGG                TTCTCGGTCGACCCG  60 359
QR90_RS08365 NONE
QR90_RS08370 NONE
QR90_RS08375 1752723 .. 1752767 +  -2.5  -2.50816   ACCTGCTGGCGGAAC GGCCATGACGGCGCCTGAGCG GCG CGCTGCGGAGCAGGGATGGCG CTTCGTGCATCCGGA  37 18
QR90_RS08380 NONE
QR90_RS08385 NONE
QR90_RS08390 NONE
QR90_RS08395 1757170 .. 1757188 +  -4.4  -2.79796   GTCCGAGGACAACAG             CCGTGGCG TCG CGGCACCG             TCTGGTGCAGTCGGC  42 54
QR90_RS08400 1758314 .. 1758327 +  -2.3  -2.67365   GAAATGATCAGGCAA               CCATG ACCC CACGG                GTGTTCTTCATCGTT  38 20
QR90_RS08405 1759123 .. 1759133 +  -2.4  -4.07687   TCAGGATCAACATCA                 CCAG GCT CCGG                 TTTTGCAAGAAGCGT  58 329
QR90_RS08415 NONE
QR90_RS08420 NONE
QR90_RS08425 NONE
QR90_RS08430 1764388 .. 1764419 + -10.1  -3.01791   AGGTCCGCAGTTATG      TCCGCGTCCG-GGC CGACA GCCGCTGACGCGGG      TGTTGGCGGCGACAT  62 387
QR90_RS08440 NONE
QR90_RS08445 1766054 .. 1766065 +  -7.2  -3.01712   TGTTTGACGGCGCTG                CGGC CCAC GCCG                 TGTTCCGCCAGGGGG  52 192
QR90_RS08475 NONE
QR90_RS16725 NONE
QR90_RS16730 NONE
QR90_RS08490 NONE
QR90_RS08495 NONE
QR90_RS08500 1778141 .. 1778157 +  -9.4  -2.78384   AACGCCCTCTGATGT              CGGCCA GAAGG TGGCCG              TGTGATCCAGCCGGG  52 259
QR90_RS08530 NONE
QR90_RS08535 1794524 .. 1794537 +  -6.7  -3.21099   CGAAGAAGTGAGGTT               CTGAG ATGG CTCAG                TTCATCGTCACGGAG  53 30
QR90_RS08540 1797088 .. 1797102 +  -4.2   -4.0274   CGCTGGGTTAATCCA               TACGCG AAA CCCGTA               TTCTTTCCTACTCGC  61 395
QR90_RS08550 NONE
QR90_RS16735 NONE
QR90_RS08560 NONE
QR90_RS08565 NONE
QR90_RS08570 1807752 .. 1807770 +  -6.1   -3.6106   CAGCAAGGGAACGAG             GGTTTAT GGCAG ATAAACC             TTTGCCAGTCTTGAC  57 10
QR90_RS08585 NONE
QR90_RS08590 NONE
QR90_RS08595 NONE
QR90_RS16745 NONE
QR90_RS08605 NONE
QR90_RS08610 1826998 .. 1827021 +   -21  -2.54896   CAGCTTGAACACAGA          GCGGCGCGCC CCCA GGCGCGCCGC           TCCCTTGGCTAGACC  91 244
QR90_RS08630 1833578 .. 1833589 +  -2.2  -4.33808   TCTGTTCCTTGAGCT                CG-GG TGA CCACG                TTTTCCGTTGCTTTC  65 476
QR90_RS17645 1834791 .. 1834803 +  -4.8  -3.67597   GATGAGGACCACGCA                GCCT CCGCC AGGC                TTCTTCCGTCCCGAC  55 106
QR90_RS08680 1853444 .. 1853457 +  -2.3  -3.59979   AGGGCGATCCTGCCG               TCCGC GACC GCGCA                TTTGGCGTGCACGAC  49 99
QR90_RS08685 1854460 .. 1854479 +  -5.6  -3.85698   GGCACGGGGGGGTGG            GGGC-GGCG GCG CGCCAGCAC            TTTCTGGCCGAGCCG  62 380
QR90_RS08695 1856634 .. 1856690 + -10.9   -2.5655   TTCCAGCCAGCACCA CA-GGCGGCGCGTTGTCCTGACGGATG CGGAC CATCCG-CACGCCAGCACGCTGCCATG CTTCCTGTACGTCGC  59 358
QR90_RS08720 1862266 .. 1862293 + -24.2  -3.08798   GCTTGAAAACCGACA        GAGCGGCGCGCC CATG GGCGCGCCGCTC         TCTTGGCTAGACCAT 100 67
QR90_RS16755 NONE
QR90_RS08835 1889897 .. 1889909 +  -5.5  -3.01791   GCGCTGCCCGCCTTG                CCGGA TCC TCTGG                TGTTGGCCCGGCCGT  49 320
QR90_RS17660 1891009 .. 1891025 + -13.7  -3.17075   GCGAGACGGCGTCCT              GCGTGGC CCG GCCACGC              TTGAGTTCCACCACC  72 358
QR90_RS17665 NONE
QR90_RS17670 1892944 .. 1892954 +  -6.8  -2.62616   GGTGCTGGAGACTGG                 CGAC GCC GTCG                 TGCTGTCGACCATGC  48 141
QR90_RS08860 1893386 .. 1893396 +  -2.4   -4.3014   ATTGATCCGTCCTGA                 GGGC GGC GCAC                 TTTTGGTCAGTGTGT  62 40
QR90_RS17675 NONE
QR90_RS08885 1901428 .. 1901463 +    -6  -3.09516   GACCTGCAAAACGCC    GTGCG-CGTCGCCACCC CGA GGGAGCGGATGTCGCAC    TTGACTCCTGGCCGG  49 49
QR90_RS08890 NONE
QR90_RS16765 NONE
QR90_RS08900 NONE
QR90_RS08905 NONE
QR90_RS08910 NONE
QR90_RS08915 NONE
QR90_RS08920 NONE
QR90_RS08925 1909126 .. 1909147 +    -3  -4.11216   CCACGGTGACGTGAG          CGCCCTGCGG CGAG CC-CAGG-CG           TTTTCGCGCTCACCC  61 32
QR90_RS08930 NONE
QR90_RS08935 NONE
QR90_RS08940 1914956 .. 1914972 +  -9.4   -5.1417   CTCCACCAGAAAGAA              CCGCGT CTCGT ACGCGG              TTTTTCCTTTTATGC 100 415
QR90_RS17215 1916458 .. 1916484 +  -5.7  -3.76224   TGCGCCGCAGCAACC        GGGGCAG-CGCG AACC CGCGCCAGCCAC         TTTCCTCGGTCAGCA  61 336
QR90_RS08970 1920142 .. 1920155 +  -2.3  -2.85999   CTTGAAATCAGGGTG               GGCGT GTTA GCGTC                TCTGGTATGACCTCC  40 77
        glpX 1921313 .. 1921326 +  -4.5  -4.93296   GATCTCTACACTCCA               CGTCC GGAG GGATG                TTTTTCTCCTCCTCG  77 82
QR90_RS08985 NONE
QR90_RS08990 1925351 .. 1925393 + -25.1   -3.9122   AGCCGGGGGTTCATT CGGGAAAAGGCCGGGAGGA GATCA TCTTCCCGGCCTTTTCCTG TTCTTTACACAGATG 100 39
QR90_RS08995 1925766 .. 1925795 + -17.2  -3.64912   CCCCTCTCCAACCTA       GCCGGAGCTTCC CATGAT GGAGGCTCCGGC        TTCTGTCTATCCATC 100 42
QR90_RS09000 1926391 .. 1926431 +  -6.9  -3.61715   GAACTGAGGGAAGGA GAC-AAGACGTTGTCGCC GGGTCA GGCAGCAACGTCTTCGCC  TTGTTGAAAGCAATC  59 34
        wrbA 1931621 .. 1931665 + -27.4  -2.96274   CAATAAACGGGGTAA GCAGCAGGGGGAGGCAGGGCCA CAC TGGCC--GCCTCCCCCTGCTGC TCTCGTTGTGCCCGA 100 35
QR90_RS09050 1937772 .. 1937800 +    -6  -3.15544   CCTTCAGGACTTCTG       CGG-CGGCGTGCAG GTC CTCCA-GCCGTCCG       TTGGTGCAGGTGCCG  50 390
        guaA NONE
QR90_RS09065 1942579 .. 1942606 + -16.3  -3.33261   CCAAAGCACCGACAA        GGCCCGCCACG AACAAC TGTGGCGGGCC         TTCTACCGATTAAAG  88 44
QR90_RS09080 1946815 .. 1946837 + -11.3  -4.62069   AGTCCTGACCCGCCA           GCCCTCTTC CCAGT GGAGAGGGC           TTTTTCAGGTCAACG  95 46
        obgE 1954606 .. 1954646 + -29.1    -5.252   GACTGAAGACGCAAA  GGGCGGAGGCCGGAGCGCA ACA TTCGCTCCGGCCTCCGCTC  TTTTTTGTCCCACTC 100 35
QR90_RS09120 1957525 .. 1957535 +  -4.6  -3.16564   ACACTCTTGAAAACG                 CGTC CCA GGCG                 TTGATCCGCTCCCCC  47 352
         gnd NONE
         zwf NONE
QR90_RS09145 1963163 .. 1963180 +    -4  -3.53091   CGTCGCTGTGAGCGG             GCCACC AATCAC GGGGGC              TTTCCGCCCGGCCAT  51 30
         pgl 1964029 .. 1964076 + -11.9  -2.72991   CATGCCCCTCAACCG GCGGGACTGCGGCGCCATTCG GCCAGA CGGATGTCGTTGCGGCCCTGC TGCTTGGCGCTGTAC  66 169
QR90_RS09180 1970648 .. 1970674 + -12.3  -3.33696   CACGCAAACAATGAA         CCGGGCGGA AAGAAAGCC TCCGCCCGG         TTCATTGAGACACCA  72 267
QR90_RS09225 NONE
QR90_RS09230 1979715 .. 1979729 +  -7.8  -3.85698   ATGTAGTGCGGTGTC               TGCCCG CGC CGGGTA               TTTCTGGGCCAGCGC  67 525
QR90_RS09240 1982117 .. 1982149 +   -12  -4.46112   CGTCGTGCAATGAAG     CGGGG-GTGTTCGGG GAGG CCCGGATGCTCCCCG      TTTCTTTGCCTCGGA 100 43
QR90_RS09245 1984256 .. 1984272 +  -2.9  -3.68222   ATCGGCGGCGGAAAA              TAGTGTG CCA CACACGG              TTCTTCCGGTTGGCA  54 23
QR90_RS09250 1986026 .. 1986063 + -22.9  -4.07568   GCCGGCACGACGCTT   GAGGAGGGCAGATTTCC AGGT GGAGGTCTGCCCTCCTC    TTTTGGGGCGGCGGG 100 44
QR90_RS09255 NONE
QR90_RS09260 1988309 .. 1988331 + -11.3  -4.63218   CGGTCCTCCATTCTT           CCCCTCTTC TTGAT GGAGAGGGG           TTTTCTTAGGCCAGC  95 58
QR90_RS09295 1994091 .. 1994108 +  -2.6  -4.49556   CGGGAAGCCAGCGCC             GCAGCC AGGCAC GGGTGC              TTTCTTTCATCCCCG  65 129
QR90_RS09305 1996527 .. 1996548 +  -3.5  -3.41878   CGCGAGACGTGGCGG           CCTGCGGCG CGCT CGACGCGGA            TTCTGGCTTCAGGCA  49 372
QR90_RS09315 NONE
QR90_RS09320 2000340 .. 2000356 +  -2.1  -3.53343   GCGGGGGTACGGAAC              ACGGGGT AAA ACGCCGC              TTTAGCCGGGCAATT  47 17
QR90_RS09335 NONE
        ribF 2004967 .. 2004982 +  -4.6  -3.40403   GGTGACGCGCAGATC              GGCGCA GGGC TGGGCC               TTCTGGTACGCGAGG  52 135
QR90_RS09350 NONE
QR90_RS09355 NONE
QR90_RS09360 2009098 .. 2009128 + -16.1  -3.40403   AGGGCGGGGCAGGCA       GGGGCAGCGGGCG ATGGG TGCCGGCTGCCCC       TTCTGCTGGCCGACA  89 40
QR90_RS09365 NONE
QR90_RS09370 2010978 .. 2011003 + -16.9  -5.16133   TTGGCAATTATTCCG         GGGAGGTGGAC GCGG GTCCGCCTCCC          TTTTTCTGTTCTGCT 100 46
QR90_RS09375 2011470 .. 2011493 +  -4.5   -4.7373   TTTCAATTGACTAGC          CGCGTGAAG GCCAAG CTCTACGCG           TTTTTCCTAGACTGC  75 27
QR90_RS09380 2012968 .. 2012997 + -12.1  -3.53012   CGCGTTTGGTGACCT       CTGGCACCAGCCA GAAC TGGCTGGCGCCAC        TTTCAGGACAGACAA  73 388
QR90_RS09415 2020094 .. 2020130 +  -7.8  -3.02511   GCCAGCAATGCCTGC   CCGCCGCGC-GTCTGGC GCGT GCAGGTCAGCGCGGCGA    TGTTCACGCCGTCGG  52 182
QR90_RS09430 NONE
QR90_RS09435 NONE
QR90_RS09440 2024443 .. 2024455 +  -2.6  -3.01791   ATCGCCTCCATCTCC                TCGC GGGTG GCGG                TCTTGCGCACGCGGT  41 323
QR90_RS09470 NONE
QR90_RS09475 2032056 .. 2032084 +  -6.6  -4.72272   ACGACCTGCCCTACC       GC-ACCCGCACGC TCCG GCTGGCGGGTTGC        TTTTTGATCCAGGCC  81 47
QR90_RS09490 2033955 .. 2033966 +  -7.2  -3.30243   GAACGGGGCCGCAGC                CGGG TAAA CCCG                 TTCTGAAGCGTGGCT  58 19
QR90_RS18105 2034981 .. 2034997 +  -9.4  -5.47159   ATCTTGCGAGAAGAG              CCTCCC CATGC GGGAGG              TTTTTTCTGTTCAGG 100 46
QR90_RS09530 2041070 .. 2041116 + -17.4  -4.48877   TAATTCAGACCTGTT CCACAGGAGCGCAGC-GGAAG AATAGA CTTCCCGCTGCGCTCCTGGCG TTTTCTGCCTGTTTC 100 84
QR90_RS09550 2045004 .. 2045041 + -15.7  -3.15574   GGCGTAGTCGGCGGC  CCCGCG-CCCG-TGCAG CGCCAT CTGCAGCGGGGCGCGGG   TGTTCATGACGTTCA  83 454
QR90_RS16790 NONE
QR90_RS09565 2047471 .. 2047499 + -11.6  -3.08327   TTGAGGGTATGGAAA        GGGGGCCAGAGC CCCTA GCCCTGACCCCC        TGTTCAAGCTTTCCT  68 8
QR90_RS09595 2054240 .. 2054265 +  -7.5  -4.72497   GCCCCGTCGCGCCCC         TCCCCCTCC CTCGTCCC GGAGGGGGC          TTTTGTTCGTGCCTG  86 54
QR90_RS09600 2055728 .. 2055738 +  -8.2  -3.21099   GATCGGGCTTGCTCA                 GGCC CAC GGCC                 TTGCTGATCACCACG  56 256
QR90_RS09635 2062132 .. 2062144 +  -4.7  -2.70932   ATCCACGGACATGCT                GCTCG TGA CGCGC                TGATTACAAGACACG  44 184
QR90_RS09640 2064045 .. 2064068 + -13.8  -5.44119   AAGTGGATTGAGAAG          CGCCCCTGCC TGAT GGTGGGGGCG           TTTTTTTACCGTCGC 100 44
        ilvB NONE
        ilvN NONE
QR90_RS18000 2067573 .. 2067586 +  -2.3  -2.87344   CAGATGAGTTGAGCA               GTCGG TGAG TCGGC                TCTCTGCCCGCACTC  40 18
        ilvC 2068686 .. 2068708 + -12.7    -4.015   AGCCGTCGAGGAAAG           GCCCTCTCC CAGGT GGAGGGGGC           TTCTTTGATGCCTAC  86 47
QR90_RS09665 NONE
        queG 2072824 .. 2072839 +    -6   -3.8381   GCCTTGCCTACAGTA              GAGGCG TGCG CGCCGC               TTTCCTGCTGTCTCT  62 95
QR90_RS09675 2073910 .. 2073944 + -15.1  -2.52676   GGTAAATACACCAGC    G-ACAGGCGTTCGTGG AGAT CCACGAACGCCTGAAC     TGCCTTCGCCCGATG  76 231
QR90_RS17235 2076319 .. 2076351 + -12.8  -2.74523   CCTGCGTGCCCTTCC     TGCGCCACGACACGC TGCA GCGTGTCGTGGA-CA      TCGTCTTCGCCATGA  68 250
QR90_RS09690 2077442 .. 2077455 +  -2.3  -3.88498   GACGTGTCAAAAGAG               CTCCC ACTC GAGAG                TTTCGTCTGTCAGAA  54 142
QR90_RS18175 2078615 .. 2078649 +   -10  -3.14878   ACCTTGAACCGGGAG     TGGAGAGCTTCCGG CGTTTTC CCGGAAGCTCGCAA     TGTTAGATTCAAGGC  64 113
QR90_RS09720 NONE
        mazF 2081796 .. 2081808 +  -3.4  -4.09685   ACTCGGCACGCTGCT                TCAG ATCGG CTGA                TTTTGGCGGCTACAA  58 13
QR90_RS09745 2087159 .. 2087183 +   -10  -5.31519   CACCGCTCCAGTCGC         GCCCCTGCTCC CTGC GGAGT-GGGGC          TTTTTGTTTGGATGT 100 47
QR90_RS09765 2090778 .. 2090809 +  -2.2  -3.14132   CACTGAGCGGACGTG      GGGTGA-GGCCCG CTAGACT CGGGCCATGAACC      TTGCTGACGCCCGCG  43 35
QR90_RS09770 2091908 .. 2091923 +  -4.6  -3.36515   CTGATGCATCTTGAT              CAGGGC GCGG GCGCTG               TCTTTGGGAATCGAG  49 387
QR90_RS09780 NONE
QR90_RS16795 NONE
QR90_RS09790 NONE
QR90_RS09795 2097381 .. 2097395 +  -5.6  -3.12351   TGCGGACGCCCGCAC               CCACCT TGT AGGAGG               TTCGATATGAAGAAA  51 1
QR90_RS09800 2099682 .. 2099715 +  -2.1  -4.07885   TAGGCCGGGGGGAGG     GCGGTCAGGCGGGCG ACAT TGCCAGCCAGCTCCC      TTTTCCCGCCCCCTG  57 38
QR90_RS09805 2101183 .. 2101229 + -14.3   -4.0031   GCCTGCCCGCGCCTG C-CCGCGCACCCGCCCCAGC CGATCAGC GCCGGGGCGGAGGCGCGGCG TTCTTTGCTGCCCGT  93 178
QR90_RS09810 NONE
QR90_RS09815 NONE
QR90_RS09820 NONE
QR90_RS09825 2105054 .. 2105070 +  -7.9   -5.5112   ACGTGAATTAGAAAA              CTCCGCT CCA GGCGGGG              TTTTTTGTTGGTGAG 100 84
QR90_RS17705 2107857 .. 2107874 +  -8.3  -3.40073   ATGCGGCAGGGCGTC             CCCGCCG GAGC CGGCGAG              TTCGTTGATGACCAT  61 478
QR90_RS09840 2111313 .. 2111328 +  -2.4  -3.53091   CCGGCCTGATGCGCT              GACCGG GTGC TCGGCC               TTTCGGCCGACCGCT  47 24
QR90_RS09850 NONE
QR90_RS09855 2114875 .. 2114888 +  -5.2  -3.14344   CCCCACCTGACCCTG               CCCG GGCGCA CGGG                TTCATGACCACGGTC  48 5
QR90_RS09860 2115558 .. 2115570 +  -4.7  -3.32963   CTGCTGGTCGCCAAC                CGCGC CGT GAGCG                TTCTCAAGTGAGGCT  50 2
QR90_RS09865 NONE
QR90_RS09870 2117864 .. 2117921 +  -6.6  -3.18383   GCATCCCCGTGCGCA CGGCCGCCCGCACGGTGCCGCGCGCCG CCTCC CAGCGCGTTGCCCCCAG-GGCCAGCCG TTCCTCGATGGCGCT  50 279
QR90_RS09905 2124071 .. 2124086 +  -6.8  -4.84527   CCCAACCTCCAGAAA              CCACTC GCAA GGGTGG               TTTTTACTGTGTGCG  83 58
QR90_RS09910 NONE
QR90_RS09915 2126053 .. 2126063 +  -6.8  -4.13767   TAGCGAACAAACAGT                 CCTG GGA CAGG                 TTTTCACGTCCAGCA  69 467
QR90_RS09925 2127735 .. 2127753 +  -6.6  -3.39286   AAATACCAGGACCTG             GAACGCGT GGG GCGCGGTC             TGTTTCGGCTGCTCT  52 373
QR90_RS09935 2128715 .. 2128741 +  -5.8  -3.01791   CGGCGTCGATGGCGT        CCCTGGCC-AG CAGCAC CTCGGCCTGGG         TCTTACCGCGGCCCT  48 177
QR90_RS18115 NONE
QR90_RS09945 2129857 .. 2129873 +    -5  -5.14563   TACTTCAAATGAAAA              ACCCGC GCTGG GCGGGC              TTTTTTGGTGGGCGG  86 370
QR90_RS09955 2132785 .. 2132823 +  -5.9  -2.70979   TTGCCGTCCTTGCCA  CCG-GCC-CGCACGTCTGG AAT CCCGATGGGCGTGGTGCGG  TCCATTTCCTTCGGG  46 161
        sdhC NONE
QR90_RS09970 NONE
        sdhA 2135869 .. 2135893 +  -4.2  -2.80344   TGTACTGATCCGTGA          CTGAGGGGAG AAGAC CTCTCTCCAG          CTTCTTCCCTCAAAG  42 33
QR90_RS09980 2136705 .. 2136733 + -14.6   -3.8917   GCAGAGTTCAGGAGG       GGGCGCGGA-GGC TAAG GCTTTCCGCGCCC        TTCTTCTGGTTCCAG  89 42
QR90_RS10010 NONE
QR90_RS10015 NONE
QR90_RS10020 2141639 .. 2141655 +  -4.3  -3.05384   TTCACTCCCTCTCTG              CGAGCTG TGC CAGTCCG              TTCGGTCAAAAGGAA  45 145
        msrP NONE
QR90_RS10030 2143751 .. 2143789 +   -18  -4.56597   ATGAGAAGCCGCTTC   CGCGCGCCGCCCCCTCTG CTC CGGGAGGGGCGGCGTGCC   TTTTTCGCAGGCGAC 100 174
QR90_RS10035 NONE
QR90_RS10040 2145567 .. 2145584 +  -2.6  -2.76492   GTGAGCGGCGGGGCT             GCCAAC TCACGC GCTGGC              CTTTAGAATACCTGC  39 376
QR90_RS10050 2156064 .. 2156074 +  -8.2  -4.59109   AACGTCGTGAGGATC                 GGCG TAC CGCC                 TTTTTGAACGATCTC  86 518
QR90_RS10090 NONE
QR90_RS10095 NONE
QR90_RS10100 2162580 .. 2162590 +  -2.4  -3.81575   CCGGATCCACCGGGC                 GCCC GCT GGCC                 TTGTCGTTTTTTAGA  53 140
QR90_RS10165 2176957 .. 2176982 + -12.5  -4.74103   TCAGGAGCAAAAAAA         GGGCCGAAGGC GTGA GCTTCCGGCCC          TTTTTCAGTTCAGCG 100 42
QR90_RS16805 2178204 .. 2178252 +  -7.2   -3.4252   CGCAAATTGAACCTA C-TCCAGACCCGCCCACTCCTCC AGCA GGTAGCGCAGGCGGGTCTGGGCG TTGTCCTGGCTGCCG  60 105
QR90_RS10185 2179490 .. 2179527 + -16.3  -2.86164   GCGCGCTCCTTGCAA   AGGCCGTCACCGGGG AAACGAAC TCCCGGTGACGGCCC    TGTCCTGCTTGAGCG  83 56
QR90_RS10225 2186689 .. 2186721 + -25.7  -3.61983   CCCGTTCATCCGCGA      CGCGCCGCCGAGAGA AGG TTTCTCGGCGGCGCG      TTCTGTCTGGCTTAC 100 134
QR90_RS10245 2193497 .. 2193507 +    -4  -2.77899   GATGTAGGTGGATGG                 TCAA CGG TTGA                 TGGTTGATGAAAAAA  42 34
QR90_RS10250 NONE
        nudC NONE
QR90_RS10260 NONE
QR90_RS16810 2197500 .. 2197512 +  -6.3  -3.83205   GAACCGGCGACCCAA                CGATT TTC AATCG                TTTGCTCTACCAGCT  63 64
QR90_RS10295 NONE
QR90_RS10300 2203951 .. 2203961 +  -4.6  -3.33162   AGCCTGTCCCTTTCT                 GCGT CTG GCGC                 TTATAGCCTGCCCTG  50 39
QR90_RS10305 2204405 .. 2204420 +  -6.8  -3.96148   CCGCCAGTGCCTCCC              GGAGCT GCGC GGCTCC               TTTGTAATGCACGGC  66 88
QR90_RS10315 2206595 .. 2206633 + -12.5  -3.48276   CTGAAGCAGTGGCGG  GGAGGGCCGG--GTCAGAG TTG CGCTGACGTCCGGCCCTTC  TTCTCTCGCGGCCAG  76 37
QR90_RS10330 2212962 .. 2212993 + -10.7  -3.73775   GGGGCTGAATCCTTC      GCGGCGGGCCCCG GGGGAG TGTGGCCCGCCTC       TTTCGTGGGGCTGGC  76 44
QR90_RS10335 NONE
QR90_RS10340 2214106 .. 2214135 + -17.2  -2.62184   CCGAACACACAGAAA       GGGCCGTCAGGG AATGAC TCCTGACGGCCC        TGCTGTCACAGACCA  83 59
QR90_RS10355 2216027 .. 2216057 +    -9  -3.71917   CAGGCTGCAATCAAG      CCGCCAGCAGCGA GTTTCG TCGCC-CTGGCGG       TTTGACGTTTCCCCT  71 48
QR90_RS10365 NONE
QR90_RS10370 2219272 .. 2219290 + -11.7   -4.8622   GAAGGCAGGAAGACC             GCCCCAC CGGAC GTGGGGC             TTTTTCGTTGGCCGG 100 202
QR90_RS10390 2225020 .. 2225030 +  -2.4  -2.52464   CATGTACGCGGGCGT                 GCTG AAG CTGC                 TGCGTTGAGGGAGAG  37 7
QR90_RS10395 2225743 .. 2225769 + -12.3  -3.87979   AGATTCGGACAGAAA         GCGGAGGCC ACAGCAACG GGCCTCCGC         TTCTCTTTGCCTTTG  81 44
        crtI 2227566 .. 2227596 + -17.6  -5.32565   CCAAACCACAAAAAA       GCGCCGCCGGGA TTCAACC TCTCGGCGGCGC       TTTTTTCGTTACTTG 100 42
QR90_RS10415 2231297 .. 2231330 + -11.7    -5.055   AGTTCGATCTGAAAA     TGAGCCGTGGG-ACTG CTT CTGTTCCCACGGCTCC     TTTTTTCAGCCTTCC 100 41
QR90_RS10425 2233242 .. 2233278 +  -7.2  -3.08867   TTGGCACGCAGCGAG    TACAGGGTCTGACCGG AGGGC CCGGACAGACTATGAA    TCTGTTCCCAGTTGA  52 140
QR90_RS10440 2235944 .. 2235989 +  -8.1  -5.00616   GCGGGGCGCTGGCCC ACAAAATAGGGTGGAGAGGCG AGTG CGCCCCTCCACCCCGTTCAGC TTTTTTCAGACGCCC  93 17
QR90_RS10480 2245081 .. 2245108 +  -5.4  -3.32647   CCACACCAGCGTATC        GGCCCGCGCC CAGCCGAT GTCGCGCGCC         TTGCTGTAATTGCCG  49 297
QR90_RS10490 2245801 .. 2245830 + -19.4  -3.33815   CGAACTGAACATCAA       GACCCCCGACTC TGGGTT GAGTCGGGGGTC        TTGATTCAGCGCCCT  93 52
QR90_RS10520 2251120 .. 2251167 + -18.6  -4.14472   CGCTCTGAAAGCAGA GAGTGATCCCCCTTCCATGCG TTTAAGC CGC-TGGAAGGGGGACCGCTC TTTTACGCATGTTCG 100 41
QR90_RS10545 2255298 .. 2255334 + -11.5  -5.20333   TTCTGAACTGAAGAC    GCTGCTGGGTCTCTCCA CCA TGGGGAGGCCCAGTTTC    TTTTTCTTGTGACTC 100 44
QR90_RS10550 NONE
QR90_RS10555 2256547 .. 2256557 +  -2.4  -4.30014   GCCGCCGCGCGCACA                 CCCC GGA GGAG                 TTTTGAGTTACTGGC  62 163
QR90_RS10560 2258111 .. 2258137 +  -7.2  -5.36441   GCCACCTCACCTTCT         CCCCCTCTCC AGCTCAC GGGGAGGGGA         TTTTTTGTGTCCCCC 100 41
QR90_RS10565 2259507 .. 2259525 +    -8  -3.19246   CGCAGCAGTTCATCT             CCAGCGGC GTG GCCGTAGG             TTGCGTTGACCTTGC  53 301
QR90_RS10580 2264488 .. 2264503 +  -3.2  -3.78934   GCCGGCGACGGTGAC              TTCCAC GGGA GTGGGG               TTCTTGTAGAAAGGA  55 197
QR90_RS10600 2268895 .. 2268913 +   -11  -3.21099   GCCGTCCAGCAGCGT             GCCGTTGT ACG ACAGCGGC             TTGGTGCTGACCACC  64 516
QR90_RS10620 2272839 .. 2272854 +    -6   -3.1552   CGAGACGATCTGCAC              GCCGCG CGCA CGCAGC               TGTTCATGCATGGCG  50 395
QR90_RS10650 2279083 .. 2279124 + -10.1  -2.62184   AGGTTCATTCGCTCC GCTGCCCCCCACATCTGAAG TTC CAGTGGAT-TGGGGGGCGGC TGCTGTGGGGCGCGG  59 39
QR90_RS10655 NONE
QR90_RS10660 NONE
QR90_RS10665 2282575 .. 2282607 +  -2.8  -3.62046   GTGACTTCCTTCCTG     GTGTCCTGACCGT TCTCGGTC ACGGTCACGA-AC      TTCTTGAGGGGCTCG  50 338
QR90_RS10690 NONE
        rplM NONE
        rpsI 2288370 .. 2288392 + -19.2  -6.15536   AGATTCCACTCAAAA           GCCCCTCCAG AAT CTGGAGGGGC           TTTTTTTTGTTGCTT 100 45
QR90_RS10715 2291400 .. 2291422 +  -6.2  -3.18264   CGCTTCATTCCTTAA           CCCATCGG GAAAACA CCGCTGGG           TTACTCCATACGCGG  51 95
QR90_RS10725 2293385 .. 2293407 +  -3.5  -3.40403   GCCTGTCCCGACTTT          GCC-C-CTCAT TGG ATGAGAGCGGC          TTATGATGGACCCCC  49 174
QR90_RS10730 2295189 .. 2295219 + -13.2  -3.64822   ACTCGGCAAACAACG       CGCCCTCCCCCTGT CAA AGAGGTGGGGGGCG       TTTCCGTAGGGCGGT  77 106
        malQ NONE
QR90_RS10740 2297531 .. 2297573 + -10.5  -3.63744   ACGGAACCGTTTCAG GAGGAGCCGAGGACAAGCCG GACA TGGCGAG-CCTCTGCTCCTC TCTTTTGGCCGGCAG  70 43
QR90_RS10760 2303849 .. 2303865 +    -3  -3.22521   CCTTCATTAAGTCTG              CATTCT TGATC AGGATG              TTAGATTCCTCTGCG  44 109
QR90_RS10765 2304571 .. 2304591 +  -4.6  -2.66316   CGTGGAACTAGGAGA            GAGGCCGT CCGGT ACGGTCCC            TGATCTGCTCGGCCC  43 139
QR90_RS10800 2310990 .. 2311011 +  -6.6  -5.14563   TTCCTCGAACTGGGG           GGTGGG-TG CAGGA CAGCCCACC           TTTTTTCGTGGAGGG  88 236
        rimP NONE
        nusA NONE
QR90_RS10815 2313108 .. 2313122 +   -10  -2.69799   GCCGTCCGCGCGGGT               CTCACC GGA GGTGAG               TCATGTCTAAAGTCC  60 1
        infB 2315149 .. 2315162 +  -4.5  -5.24799   GGTTCCTACACTCCA               CGTCC GGAG GGATG                TTTTTCTCTTTCTCG  88 184
QR90_RS10825 2315887 .. 2315897 +  -2.4  -4.94487   CCGAAGGTCCGCCAG                 CAGC CGC GCAG                 TTTTATATTTTCTCC  74 44
        secD 2318355 .. 2318388 +   -14   -5.3104   ACTCACGTTCAGCCA    GCACCGCCTG--ACCC GACT GGGTTTCAGGCGGTGC     TTTTCTTTTTCGTAC 100 89
QR90_RS10835 NONE
QR90_RS10840 2321162 .. 2321184 + -11.3  -3.20348   TCTACTGCTGAGCGG           CTGGTCTCC ATACG GGAGGCCAG           TTCAGTCTTCGTCAA  64 308
QR90_RS10855 2323460 .. 2323490 + -13.2  -3.17075   CCGCAAACGGTAGAA       GGGGGCCGCTCCCA CAC TCGGAGCTGCCCTC       TTGCATTGACAGAGC  73 65
QR90_RS10860 NONE
QR90_RS10865 NONE
QR90_RS10875 2328944 .. 2328971 +  -5.4  -3.08679   CAGCGTCTCCAGCTG        CGCCGCCAGCCCG CTC TGGGCCGA-GGCG        TGTTCGATCAGCCGC  46 383
QR90_RS10890 2331716 .. 2331731 + -11.8   -5.5208   AGCTGGAATGAAAGG              CCCCGC CCCG GCGGGG               TTTTTTGTGTTCTCG 100 46
        treS 2333620 .. 2333644 + -12.8  -3.05384   GCGCACCATCAAAAA          GGCCCCCTCC AGCAC GGAGAGGGCC          TTCGGTCAGGACCGG  71 105
QR90_RS10915 2338421 .. 2338461 + -24.8  -2.73875   AGGGCAACAGAAACA  GGAGGCGGGGCCTTGAGG AAGAA CCTCAGCGCCCCGCCTCC  TCCTGTTGGCCGCCG 100 48
QR90_RS10945 2341458 .. 2341473 +  -6.8  -5.48825   TGAACTTCACCTCAA              GCATCC GAAA GGGTGC               TTTTTTTGGCTGGTA 100 52
QR90_RS10955 2344360 .. 2344371 +  -5.8   -3.3517   CGTAGGCTCTCGGGT                GCTG CGCT CAGC                 TGTTCTCTACTCGGT  52 525
        recO 2345652 .. 2345667 +  -6.8  -3.02144   CACGCCGGAAATGAC              CGCCGT GGAA ACGGTG               TCTTAAGGGCAGTCC  51 4
QR90_RS16840 2347572 .. 2347614 +  -4.7  -3.53012   GGCTAGTCCTCTCCC CCGC-CCGCTGCCGC-GATGG CCC CCAGCAGCGCCACCGGAGCCG TTTCCGCCCGCAGAA  53 35
        proC NONE
QR90_RS17730 NONE
QR90_RS17735 2350775 .. 2350785 +  -2.4  -3.32343   GGAATGCGATACTTC                 CGGC ATG GACG                 TTCTCGCGCTGTACC  45 124
        pyrE 2351575 .. 2351585 +  -2.4  -2.57344   TGTCCAGAAAGGGCG                 GCAG GCC CAGC                 GTTCTCAGCCCCATA  38 252
QR90_RS11010 2352543 .. 2352556 +  -4.5  -5.02439   GATGTCCACACTCCA               CGTCC GGAG GGATG                TTTTTCTCCTTCTCT  81 88
QR90_RS11020 NONE
QR90_RS11025 2354739 .. 2354750 +  -5.8  -3.90922   GCTGCTGGGCGGCAT                TCCG CACG CGGA                 TTATTTGAAGGAAGT  62 161
QR90_RS11040 2357145 .. 2357171 +  -5.7  -4.15044   CGGAACGCCCAGGCC         GCGCGCCTCGA TCACC TCGGGGCGCAA         TTTCTTCGCGCCACA  69 298
QR90_RS11050 2358589 .. 2358607 + -11.7  -5.40072   AACGCCCTTTCTCTG             GCCTGCC CGCGC GGCAGGC             TTTTTTTGGGCCGGG 100 47
QR90_RS11055 2360334 .. 2360360 + -10.9  -4.08767   CGTCTGAACCGAAAA        GCCCCTCA-CCG ACTA TGGTTGAGGGGC         TTTTCCCCGGCTGGA  82 48
QR90_RS11085 2367789 .. 2367830 +  -8.8  -5.08824   GTAAGCGCTGAACAC CGG-TGAGGCGGAGCGGC GTTCCATA GCC-CTCCGCCTCATCCC TTTTTTGACTCAACG  93 37
QR90_RS11090 NONE
QR90_RS11095 2369919 .. 2369952 +  -5.2  -5.36441   CCAAAACCATTACCC     T-GCCTGCCCTCTCC CGCGC GGAGGGGGCTTGCTA     TTTTTTATGTGCAAC  91 45
        ttcA 2373861 .. 2373875 +  -2.8  -4.07868   CGTGGAGTGTGGGAA               TCGG CGCTCTC CCGA               TTTCTATAGCTCTAC  58 363
QR90_RS11110 NONE
QR90_RS16845 2375118 .. 2375128 +  -2.4  -2.71924   GTTCGGCGGTCCAGT                 CGCG CTG CACG                 GTTTCAAGGGGCGTC  39 231
QR90_RS11150 2381005 .. 2381035 +    -9  -3.81488   AGCACGCTCCCCCAG       GCACTCCCCTTC CCTCCCC GGAGGGGAGTCC       TTCTATTTCACCGCG  71 51
QR90_RS11170 NONE
QR90_RS11175 2386388 .. 2386423 +  -5.9  -4.37886   AGCGGGGCCATGCCT    GCCGAGCCTCTGGGC TGAGAT GCCCAGCGCCGCGCC     TTTTCTCCGCCATCC  71 45
         aat 2387027 .. 2387039 +  -4.8  -2.85668   GAACGCGGCGTTGTA                GAGG GCGCG CCTC                TGTCCTCTGCGACTA  46 25
        serA 2388794 .. 2388819 +   -19   -2.8474   GTTGGCAGAAAAATG         CCCCCCGGCC ACACTC GGCCGGGGGG          TACTTCTGGCTCGCG  91 84
QR90_RS11195 2391645 .. 2391661 + -10.8  -2.52896   GGCCACCGGGTGCGT              CCGGGC GCGCG GCCCGG              TGGGTTGCAGCCTCA  58 320
QR90_RS11215 2395168 .. 2395196 + -19.7  -4.17958   CGGATGAGATGCAGA        CGTGGGTCAGAGG CTG TCTCTGACCCACG        TTTATTGGGCGTGTT 100 44
QR90_RS11240 2401798 .. 2401817 +  -6.3  -4.14472   GGGTGGCGAGGTCCG            CGCCCAG GTCGAA CAGGGCG             TTTTGCAGGTATTCC  69 388
QR90_RS11250 2403646 .. 2403693 + -13.9  -3.01791   GCAAGGCCGCGCGGG CCGCCGCCACCGCCCGCCACT CGGCCT GGAGGCGGGTGAAGGCGGGGG TGTTGGCAAAAGCGT  69 385
        nadE NONE
QR90_RS11270 NONE
QR90_RS11275 NONE
QR90_RS11280 2408784 .. 2408824 +   -12  -3.74693   ACATTGCCTGAATCA GGACACGTCTGGGAACGGT GCAA ATCCT-CCCAGACGTGTTC  TTTCCTGACGTGACA  78 104
QR90_RS11285 2410721 .. 2410740 +   -10  -4.18197   CGACGGGTACGGAAC            GCTCTCTC CCTG GAGAGGGC             TTTTCCATGGCCCAT  81 69
QR90_RS11295 2413835 .. 2413860 + -11.1  -3.33865   GGAGTCCGTATTACT         GGCCTCTTTCC AGAC GGGAGGGGGCC          TCTTGCTTTCGGATC  69 178
QR90_RS11305 NONE
QR90_RS11310 2415046 .. 2415079 + -16.7   -3.5774   ACGCCCGAACCAGCA     GCCGGGCCAGAAGCA GAAC TTCTTCCGGCCCGGC      TTTCGGACATTCAGT  91 42
QR90_RS11335 2419526 .. 2419548 +  -6.9  -3.31144   GCCAGGTGCGGTGCA          GGGCCGC-GC CCAC GCTGCCGCCC           TTGTCGGCGTCGCCG  52 407
QR90_RS11345 2420733 .. 2420745 +  -6.3  -2.62184   CCCCAATTGTATTGA                TTGCA GTT TGCAA                TCATCTGCCCGACCC  48 94
QR90_RS16850 NONE
QR90_RS11355 2422736 .. 2422748 +  -5.5  -5.02074   GGTCTGGATCACGCG                CGCTT CGG GAGCG                TTTTTTGCGAGATGA  84 210
QR90_RS11370 2424876 .. 2424898 + -11.3  -5.31275   CGCCAGAATAGAGAA          GCGCCC-CCT GAAC AGGTGGGCGC           TTTTTTGTGCTGGCC 100 36
        speA 2427126 .. 2427155 + -11.4  -2.66695   CTTCAGCCACTTCGG       GACGGCGAACCT TTCATC GGGTTCGCCGCC        GTATTTGGTAGGCGG  62 42
QR90_RS11390 2429732 .. 2429745 +  -3.1   -4.2828   CTTCCGGGGAGATCA               CGCTGT ACC AC-GCG               TTTTCCTGGATCAGC  65 378
QR90_RS11410 2432659 .. 2432677 +    -8  -3.29325   GGCATGGGGCTGCTT             GTCGGCGG TGT CGGCCGGC             TGTTCGTTGTGCCAC  55 352
QR90_RS11430 2438439 .. 2438475 +   -16  -4.11216   GGCAAGAGAGGAAAC   GGAGAGTGGGACG-CTA CCTT TCGACGTCCCACTCTCC    TTTTACCGATGGGCG 100 40
QR90_RS11450 2443451 .. 2443483 + -14.9  -2.69799   AGCTCAACCATTCTC      GGGCGGGCATCCT CTGATTC GGGATGTCCGCCC      TGCTGTGTCCCCTGC  75 41
QR90_RS11455 2444125 .. 2444157 + -17.7  -2.62184   GAGCCACCAGAATGA      GAGGAGCGCCGGACG CAA TGCCCGGCGCTCTTC      TCATGTAGACGGGGG  86 44
QR90_RS11465 2445577 .. 2445591 +    -7  -3.01712   CGTAATCCCGCTCCG               CCCGCC AGA GGCCGG               TCTTGCCCCGCGCGA  52 420
QR90_RS11495 NONE
QR90_RS18015 NONE
        rsmI NONE
        pfkA 2451873 .. 2451913 +   -11  -2.60486   AACGCGGGCATCGAA  AAGGGCGGAACGCAGGGA CTGAT TCCCCACGTTCCGCCCGC  CTTCTGCCGGTTATT  62 39
         ffs 2454513 .. 2454537 +  -4.2  -4.37711   GCGAGAATCCCCGAG         CGTCC-CCTCC AACT GGAGCAGGGCG          TTTTGCCTTTCCTCG  66 91
        argC 2455796 .. 2455812 +  -2.3  -2.91395   ACTTATAGACATCTT              TTCTTGA CAT TCAACAA              GTTTCTCGGCAGACT  40 140
        lysS 2457053 .. 2457068 +  -3.2   -2.8805   TGCCTGTGCAGAATG              GAGGCG TGAC CGTTTC               TCTCTACCGCGTACT  42 43
QR90_RS11535 NONE
        rlmN 2459340 .. 2459369 + -12.1  -3.53012   CGCGTTTGGTGACCT       CTGGCACCAGCCA GTTC TGGCTGGCGCCAC        TTTCAGGACAGACAA  73 432
QR90_RS11555 2461846 .. 2461884 + -24.7  -4.07306   TAAAGGGGACAGAAA   CGGCGGCGCTCAGGG TTGATCTGC CCCTGAGCGCCGCCG   TTTGTCGTTCGGTCT 100 38
QR90_RS11565 2463769 .. 2463793 + -12.8  -5.26316   GGTTCCAGAGTTCCA          GCCTCCGCCC CCTGT GGGTGGGGGC          TTTTTTGTGGCCTGG 100 55
QR90_RS11570 NONE
QR90_RS11575 NONE
QR90_RS11580 NONE
QR90_RS11585 NONE
QR90_RS11590 2468708 .. 2468734 + -19.5  -2.66733   AGCTCTCCCCGCCCA         GGTCGCCGCTG TTCTC CAGCGGCGACC         TCATCTGCATTGCGG  82 419
QR90_RS17310 NONE
QR90_RS11600 2470372 .. 2470386 +  -3.4  -3.07816   TTCGCGTATACCGTT               GGCATG ACC CGCGCC               TTCCATCCCTCAGAC  43 19
QR90_RS11605 NONE
QR90_RS11610 NONE
QR90_RS11615 NONE
        deoD 2474118 .. 2474150 +   -20  -3.17723   AGACCTGGAAGTGAA      GGGGCCTGTCAGAT ATTCA GTCTGACAGGCCCC      TTCACTTGCCACTCA  95 40
QR90_RS11635 2477605 .. 2477661 +  -7.8  -2.83715   CTGGTCAGTTCAAGC GGTGCGCGCCCAGTGGCG-GGCCGCCGC GAT GAGGTGGCCGTGACCCTGCGCCC-CACC TCTGCTGGTACTGCA  53 56
QR90_RS11640 NONE
        recG 2481161 .. 2481187 +    -8  -4.55295   GTCCACAGCGCGGAA         GGACCGGATC ACACAAG GATCGGGTCC         TTTCTTTCTGCGGCC  83 213
QR90_RS11650 2482145 .. 2482192 + -20.2  -4.09685   GTCTCCCACTGACCG GGCAGGCAA-AAGGGCGAGAA CGTGGTC TTCTCGCCCTTCTTGTCTGCC TTTTCCCAGCTAGAC 100 29
QR90_RS11665 2484678 .. 2484699 + -11.5  -4.34402   ACTTTTCTTTCTCTT           GCGGGCGCT TTCG GGCGTCCGC            TTTTCGTGTGCGCCG  89 68
QR90_RS11715 NONE
QR90_RS11720 NONE
        msrA 2496661 .. 2496687 +  -2.9  -2.79796   GCCCGCGTTGACCCT        GGGCCG-GGG CATCCACC CCCACTGCCC         TCTCCTACAATGCGG  40 105
QR90_RS11730 2497601 .. 2497621 +  -3.1  -3.28712   TGGACGGGCCTCTGA            CGTCGGGGT TGA GCGTCGGCG            TTCTGGGCGGCGGGC  46 26
QR90_RS11735 2499046 .. 2499058 +  -4.7   -2.5655   AGTTCGCCAGGTAGT                CCGGG CCG CCCGC                CTTGCTGTCGGTACC  42 86
QR90_RS11765 2505145 .. 2505166 +  -4.3  -3.21747   TCGCCAGCAGCGGCG           CCAGCGC CTTGACCA GCGCCGG            TTCCTCCTGGCCTAC  45 457
QR90_RS11775 2506137 .. 2506157 + -10.4  -5.11063   AGCTGCGAAACTGAT           CGCCCC-GC TTCG GCTGGGGCG            TTTTTGTTGGCTGCT 100 47
QR90_RS11780 2507047 .. 2507066 +    -7   -3.4072   GCTGAACCGGGGCGG            GCTCGGGC TCCG GCGCGGGC             TTGTACTGGGCGCTA  58 296
QR90_RS11800 2510076 .. 2510088 +  -3.3  -2.72263   CCTGAACCTCCAGCC                CCGTG CCG TGCGG                ATTTAAGGACGATCT  40 7
QR90_RS11805 2513103 .. 2513120 + -12.7  -3.09516   GCGATCTGAACTGGG             TGGGGGG TCAT CCCCCCA              TTGCCTGATCCAAGG  71 32
QR90_RS11810 2513963 .. 2513984 + -14.4  -4.68724   TTCAGGACAGCAAAA           GCCCCCGC ACGTAC GCGGGGGC            TTTTCTCTTGGCTCG 100 43
QR90_RS11835 2520709 .. 2520725 +  -7.9  -4.84642   CACACAACAAAAAAA              CCCCGTC ACC GACGAGG              TTTTCTTCATTTGGC  88 108
QR90_RS11850 2523781 .. 2523818 +  -8.4  -3.33261   TTTCCTGTTCCCCCA  GGCCCG-ATCCCAGCAGC GTCA GCAGCAGG-ATGCGGGCC   TTGTGCGCGTTCAGG  59 141
        glmU 2526280 .. 2526324 + -25.2  -3.38786   AGGACTAAAGCAAGA CACAGGAGGGG-GGCCATGAC AACC GACATGGCCTCCCCTCCTGTG TTCGTCTTGCGTGTC 100 33
QR90_RS11870 2528263 .. 2528307 +    -4  -3.57792   TCAAATGCTCTAAAC GGCAAAAGGGCCGCC-CCCGG TTCC CCGGCAGGCGGCCTCTCCCCC TTTGCGGCTAGCTGC  53 140
QR90_RS11885 NONE
QR90_RS11890 NONE
QR90_RS11895 2534168 .. 2534190 + -14.9  -5.14163   GACGCCCTGAGCGCC           GCCGCACTG CGCTC CAGTGCGGC           TTTTTCTTCGTCGGT 100 31
QR90_RS11910 NONE
QR90_RS11915 2538544 .. 2538557 +  -4.5  -4.37527   GATGTCCACACTCCA               CGTCC GGAG GGATG                TTTTCCTCATTCTCG  66 83
QR90_RS11925 2541130 .. 2541140 +  -8.2  -2.70932   CCGCGCCGTGTTCAC                 GCGC CCA GCGC                 TCATTAGCACGGGCC  52 469
        purH NONE
QR90_RS11960 2547472 .. 2547499 +   -17  -2.75496   CCTGGCCCACCAGAA        ACCGTCCCCGCT TCGA AGCGGGGACGGC         CTGTTCTTGTTCTGC  84 65
QR90_RS11970 NONE
QR90_RS11975 2550446 .. 2550456 +  -2.4  -3.35679   GGCCCAGGTACGCCA                 GCGC GAT GCGG                 TTCTCGATGCCGCCC  45 305
QR90_RS11990 2554383 .. 2554401 +  -4.5  -3.71148   TCGGCGGATAGATGA             GACAGGT GAGCA ACCTGGC             TTATGGTTTTCCTCT  56 26
        hflX 2557177 .. 2557206 +  -9.9   -4.9725   AAATCACACCCACAA       CAGAGGCGCGGGC TTTG GCTCCCGCCTCTC        TTTTTGTGTCCGCAT 100 39
QR90_RS12005 2558483 .. 2558497 +  -4.2  -3.28712   CCGTACACCAGCACC               GGGG CCACGAA CCCC               TTGTCGGCGCAGCCC  47 313
QR90_RS12015 2559842 .. 2559856 +  -8.6  -3.65351   TCGCTCGGATTTCCA               GGTGTT TTC AACACC               TTTCAATCGGAGTCC  65 160
QR90_RS12080 NONE
QR90_RS12085 2571488 .. 2571514 + -13.7  -4.21922   GCACCCCCCATAGAA        CGGGCGGCC-CC ATAT GGAGGCCGCCTG         TTTCGTTTTGAATCG  93 44
QR90_RS12100 2573391 .. 2573406 +  -6.1  -3.29144   GGGCGCGCGGGTGCG              GGCCT AGGCTC AGGCC               TTCTCCGGCAACTCC  52 19
QR90_RS12115 NONE
QR90_RS12120 2576576 .. 2576601 +  -8.9  -3.32844   CCGTGCCCAGCCGCG         CCGCGATGAGC CGAT GCGGATCGCGG          TTGTAGCCTCCGGCC  59 273
QR90_RS12130 NONE
QR90_RS12135 2579432 .. 2579442 +  -2.4  -3.33744   ACGCCCCCACCATTC                 GCCC GGC GCGC                 CTTTTTGGCCCGAAG  45 469
QR90_RS18370 NONE
QR90_RS18375 NONE
QR90_RS12150 2581378 .. 2581388 +  -3.2  -4.18018   TTGGTGCCGGGGATG                 GGCA CGA TGTC                 TTTTCCCTGCGCCAG  63 206
QR90_RS12160 2583315 .. 2583365 +  -9.8  -3.23216   CTGCCGCAGCCGCTC CGCC-GC-CGCCACGCTGAGGCTCAG GCG CTGGGCCTC-GCG-GCTGAGCAGGCG TTCGTCCTCGTCGCC  60 240
        rpsT 2585107 .. 2585139 + -21.4  -3.68024   AGTCACCACCTTCAA      GACCGGCAGGCCAT TCAAT GTGGCCTGCCGGTC      TTCTGTGTTCAGGCG 100 40
QR90_RS12200 2588694 .. 2588707 +  -5.9   -2.8934   GAAAACAAGCGTGAA               CGGGG CTTT TCCCG                TATGCTGATTTGCAG  48 27
QR90_RS12205 NONE
QR90_RS12210 2589568 .. 2589591 +  -2.4  -5.14563   GCTCCACCACCAAAA         GC--CCCCGC CAGTGT GCGGGGCTGC          TTTTTTCCTGGAGGA  81 32
QR90_RS12215 2589699 .. 2589719 +  -8.2  -5.45802   CCACCAACGACAGAA            CACCCCGT CCAGT ACGGGGGG            TTTTTGTTTTGGACC 100 35
QR90_RS12220 2592184 .. 2592209 +    -4  -4.03234   TTCGGCTTGATCCTG         CCCAG-GGTGA CGCCC TGACCGCTGGG         TTTCTCTGGCCCAGC  61 8
QR90_RS12255 2602135 .. 2602150 +  -2.6  -3.72695   CCAGAGGCATACGCT              GAA-GCA TGA TGCGTTC              TTTCCTGCGGACCCT  52 76
QR90_RS12260 2603145 .. 2603155 +  -8.2  -3.92963   CGATCTGCTTCATGC                 GGGC GCG GCCC                 TTCTTCTGCTTGTTC  70 161
QR90_RS12270 2606002 .. 2606022 +  -3.9  -3.86015   TTAAGCCACGTGCAT            GAGTTGCAG AGG CTGCCAGTC            TTTCTGAAGCCACTC  58 67
QR90_RS12275 NONE
QR90_RS12280 2608593 .. 2608605 +  -3.3   -4.3129   GAAGATGCCGAAGCG                CTCGC CGT GCGAC                TTTTCCTCGTGGGTC  67 313
        secA 2611611 .. 2611649 + -10.1   -5.0133   CGGGAAGCAGGACGC   GGTGCGCGGGAGGCGGT GTAGA GCTGCGTCCCGCGCCGC   TTTTTTGGAAGGGTC 100 43
QR90_RS12310 2614561 .. 2614575 +  -4.2  -3.85698   CGTGGAGTTGGCAAA               CCGG TGCCCTC CCGG               TTTGTCAACGAAACA  58 101
QR90_RS18020 NONE
QR90_RS12325 2617676 .. 2617694 +  -3.1  -3.95022   AGCTCTCGCTGAACA             GTTAGAG CGGGC CTCTACC             TTTCCTGTTCCTCCC  56 21
QR90_RS12335 2619162 .. 2619172 +  -2.4  -2.52464   GGGCTGCCTGGATTG                 CGCC TTG GCCG                 TCACTTGCCCGCCCG  37 52
QR90_RS12340 NONE
        tatC 2620429 .. 2620451 +  -9.1  -4.83169   ATGTTCCTCTCCCCC           ACCCTCTCC CCGGC GGAGAGGGC           TTTTTCTGACCGCGT 100 40
         lgt 2621522 .. 2621548 + -13.7  -3.66803   AGTCACAAGATAGGA         GGGCGGCCC CATCATCAC GGGCCGCCC         TTTCGCATGTTCGGG  81 45
QR90_RS12355 NONE
QR90_RS12360 2622975 .. 2623005 +  -8.3  -3.77087   TAGAGAATTAGAAAA       GGTCAGACGCC AACCGTTAC GGCATCTGACC       TTTCCCTCTTACGTG  69 194
QR90_RS12370 2627043 .. 2627064 +  -7.3  -3.21276   GTCGCCCCAATGGCG           CGCAGGA TGGCGATT TCCTGCG            TCTTCTCAAACACCG  53 352
QR90_RS12405 2633578 .. 2633603 +  -4.5  -2.52543   ATTGGGCAGGTAATG         GCGAATGGCCC CGCT GGACCAGCCGC          TGCGTTGCGACAGGT  42 476
QR90_RS12415 2634562 .. 2634582 + -10.4  -2.71364   CGGCCATCTCTCTGG           GGCG-GGCG TCGC CGCCGCGCC            TCGTTGCGACCATCC  56 454
QR90_RS12450 2642774 .. 2642785 +  -2.2  -4.82901   ACGTCGCAGCGGCCC                TTGC CCTG GCAG                 TTTTTCTGCAAGGCC  79 239
QR90_RS12460 2644533 .. 2644558 +  -9.7  -3.68569   CGGTCAGGGTGTCGC         GCAGTTCGTCCG ACT CGG-CGTACTGC         TTGTTCAGTCGGTAG  71 147
QR90_RS12475 2648384 .. 2648404 +  -3.1  -4.18018   GGCCGAGATATGGGC            GCGGTGATC GGC GGCCACGGC            TTTTGCCTGGGCAGA  61 259
QR90_RS12485 2650314 .. 2650324 +  -2.4  -4.25104   ACACGCTCTTTTCCT                 GGGG CGT CCAC                 TTTTCCTCGAAACGC  65 383
QR90_RS12525 2658686 .. 2658704 +  -2.3  -3.28712   ATCGATGGTCAGGCC             GTACAGC TTGTC GCGGTGC             TTCTCCAGCGGCAGG  45 246
        ppsA 2661844 .. 2661877 + -13.9  -3.55444   GAGCAGGAAGAGAAA     GGCGGGAAAGCAG TTGAACTT CTGCTTCCCCGCC      TTTCAGCCGTACAGA  81 52
        purE 2663817 .. 2663862 +  -2.4  -3.28924   GTTCTTCGAGGGCCA TCCCCAGGCGGGTGCGGAATG ACCCC TGTCCCGC-CGCACCTGGGCA TTCTCGGCGGCGGTC  45 4
        purK NONE
QR90_RS12560 2665607 .. 2665620 +  -8.1  -5.24799   GGTTCCCACACTCCA               CGTCC GGAG GGACG                TTTTTCTCTTTCTCG 100 140
QR90_RS12585 NONE
QR90_RS12590 NONE
QR90_RS16875 2671435 .. 2671486 +  -4.1   -3.5393   GCGGCTGTGGTATCT TTCTCTGCCGCCGCGAGCGGTTC GGCCCA GGCCCGCCCCCGGCGGAATGGAC TTTGCCGGAGCTGCT  53 169
        rpsO 2671831 .. 2671856 + -14.7  -3.93782   CAGCGTTTCCACGAG         CCGCCGCCC AGACCATG GGGCGGCGG          TTTCCTCTTGGCTGC  89 45
QR90_RS12615 NONE
QR90_RS12620 2674893 .. 2674916 +  -9.5  -5.44721   AGAGCGTGTGGATGA          GGGAGAGGC CGCCGC GCCTCCCCC           TTTTTTTGCCGTGAT 100 40
QR90_RS12625 2675533 .. 2675576 + -21.9  -4.78149   GGCCCACCAGCCCCG CCGCGCCCCACGC---CCCGCT GCC AGCGGGACCGCGTGGGGCGCGG TTTTTGGCTTCTCCA 100 40
QR90_RS12630 2677361 .. 2677390 +  -7.2  -5.00616   GCCATACGCCGAACT      GGG-GGAAGTCTGC TACC GCGG-CTTCCTCCC       TTTTTTGGGCCCAGG  93 80
QR90_RS12635 2679021 .. 2679034 +  -2.3  -3.08314   CAGAAAGGTAACCCC               GTCAG CGTT CAGAC                CTTTTGACCCTTAGA  41 162
QR90_RS12640 2680351 .. 2680367 +  -2.9  -2.85351   GGCGGGGCGGCGTGA              CGCGG GGAACGA CTGCG              TGTACTCTCAGGCCA  42 26
        galE 2681584 .. 2681600 +  -4.3  -2.73364   TTTTTAAAATTGATC              CGCTATG CTA CAGGGCG              TGATTAAGATCGACC  42 163
QR90_RS12650 2682894 .. 2682908 +  -5.6  -2.62184   CGCGCGGCATGACCA               GCGACA AGG TGACGC               TCCTGTGAGCGCGCC  46 3
QR90_RS12655 NONE
QR90_RS12660 NONE
QR90_RS12665 NONE
QR90_RS17750 2686798 .. 2686808 +  -6.8  -4.20696   ATTTTTACCTTTCAT                 GCTG GCC CAGC                 TTTTGGCGTTGGTGA  69 52
QR90_RS17315 NONE
        wecB NONE
QR90_RS12675 NONE
QR90_RS12680 NONE
QR90_RS12685 NONE
QR90_RS12690 2693026 .. 2693036 +  -2.4  -3.15861   GGTCTGCCAGGGTTT                 CACC GTA GGGG                 TTGGTCAAGGTGATG  43 90
QR90_RS12715 2699837 .. 2699847 +  -2.4  -2.75963   CACCCGCACGGCGGC                 GGCC ACG GGGC                 ATTTAACGTGGACGT  39 9
QR90_RS12720 NONE
QR90_RS12725 NONE
QR90_RS12730 2702751 .. 2702783 + -11.3  -2.57132   CATAGAATCGGCCAA      GGGAATAAGGACGGG AAC CCTGTACCTATTCCC      GTTATGCAAACCCCC  62 50
QR90_RS12765 NONE
QR90_RS12770 2713585 .. 2713607 +  -5.4  -3.79043   ATTCCAGACGGATTG           GATCGCCCAC TTT GTGGGCCGAC           TTTCCGTTGATGGTC  58 226
QR90_RS12775 2716240 .. 2716261 + -18.7  -3.54029   TGAAAACAGACAGAG           CGGCGCGCC CATG GGCGCGCCG            TTCTCGTTGCTAGAC 100 70
QR90_RS12845 NONE
QR90_RS12850 2735377 .. 2735406 +  -5.6  -4.54727   AGAAAATTAATACAG       CCGCCCGCTTTC TCTCTT GAGAACGGGCGA        TTTTCATTTCACCCG  76 105
QR90_RS12855 NONE
QR90_RS12860 2739600 .. 2739626 + -13.8  -3.54543   ATAGACCAGCAAACA         GCCCCTCTTC GGTGATG GAAGAGGGGC         TTTGCAGAAATGAGT  81 41
QR90_RS12875 NONE
QR90_RS12880 NONE
QR90_RS12885 2750388 .. 2750418 +  -9.5  -2.74514   CAGTAACGGCACGCC       TGCCGCCCGGCGG ACACC CCGCACGGCGGCC       TCCTTCCCCCTTTCG  57 48
QR90_RS12890 NONE
QR90_RS12895 NONE
QR90_RS12900 2754005 .. 2754050 +  -7.3  -3.75629   GCCCCGCGCCGAGCA AAAGAGACGGCAGGGGAACGG TCCA CCGTCCGCCTGCCGCCTCAAC TTTCAGTTGCCGCTA  65 70
QR90_RS16900 2758530 .. 2758558 + -12.5  -2.66316   TCCAGCCGCCCGTCA        GACCGTTTGGG AAGCCCA CCCGAACGGTC        TGCTGTCGTGGGCGG  67 55
QR90_RS16905 2761158 .. 2761171 +  -6.7  -2.93723   GCTCTAGGCTGGGGC               CATGC TCAA GCATG                TGTCGTTCATCACCG  50 74
QR90_RS12925 2761908 .. 2761949 +  -3.5  -3.66018   GCCGGGCCACCGAGG CC-GGGCCAGACCCGCGTTC AGC GAACGGCGTTGCGGCCCAGG TTCTTGGCCTCGTAC  51 343
QR90_RS12940 NONE
QR90_RS12945 2766781 .. 2766806 +  -7.5  -4.18197   TCCGGGCCGCCAGAG         GTCCTGGGGGT TAGA ACCACCATGAC          TTTTGGCTCAACCCT  72 58
QR90_RS12950 2767848 .. 2767873 +  -3.9  -4.15748   GGCTCCGTGCCCGTC         TGACAGCGCAC CTTC GCGTGCTCTCA          TCTTTTTTGCCGTGC  63 55
        dnaG 2770059 .. 2770078 +  -9.2  -3.14132   ACAGGTGGCGGGCGG            CGTAGCCC CAGC GGGCCACG             TTGATCAGGCGGGCC  56 296
        tsaB 2772470 .. 2772482 +  -5.5  -4.11216   GGGCTTGTACCCGAA                TCTCG GAT CGGGA                TTTTGCGCGTCCAGC  66 103
QR90_RS13005 NONE
QR90_RS13010 2780247 .. 2780295 +  -7.2  -2.78463   TGGATCGCCAGAGTG GATCTGCCCCGAGCTGATCTGC CCAGA GCTGATCTGCCCAGAGCTGATC TATCATCGGCGGCAT  52 9
        murI NONE
         rph NONE
QR90_RS13025 2782339 .. 2782349 +  -5.4  -3.86015   GACTGATACAGACTC                 CGAT TGA ATCG                 TTTGTCAAAACGATA  60 35
QR90_RS13030 2782801 .. 2782837 + -15.1  -3.61371   CCGCACTAGACATCG    GGGAGGCGTGGAGGC ACTTTTG GCCGCTGCGCCTCCC    TTTACACTGCCGTTT  86 55
        dusA 2783919 .. 2783931 + -10.5  -3.06183   GCCGGATCAGGTCAG                CCCCG CGC CGGGG                TTACCTGAGCGTGAC  62 48
QR90_RS13075 2792100 .. 2792115 +  -8.2  -3.02263   CTGGCCGCCACCCTG              GGGCTG CATG CGGCCC               TATTCACCGCCCTGT  57 111
QR90_RS17790 NONE
QR90_RS13090 2795034 .. 2795056 + -10.5  -5.14563   CACGCTGGACCTGCG           CCTCCTCCC CCTGC GGGTGGAGG           TTTTTTCGTGGACGG 100 46
QR90_RS13095 NONE
QR90_RS13100 2797121 .. 2797141 +  -3.1  -3.05343   GCGGGGAGCAGGGGA            GGCCGGGCG GCC TGTGCGGTC            TGTTCGGCCTGTGCG  41 328
QR90_RS13110 2799235 .. 2799270 +  -9.1  -3.17051   CGGCGACGAAGCCGT    CCACGGGCTT-GAGGT CCACC ACCTTGAAGCCCATGG    TCTTGATGATGCGCC  56 348
QR90_RS13135 NONE
QR90_RS13140 2805711 .. 2805724 +  -4.5  -5.22006   GATGTCCACACTCCA               CGTCC GGAG GGATG                TTTTTCTTCTGCTCG  84 156
QR90_RS13150 NONE
QR90_RS13155 NONE
QR90_RS13160 2810369 .. 2810383 +  -3.5  -3.09018   AACCTGTACACGCCC              GCGAGC CGGT GC-CGC               ATTTTGCGGTGATGG  43 89
QR90_RS13165 2810502 .. 2810516 +  -8.5   -5.9218   CCGCCAAAGAAAAAT               CCCGC ATCAC GCGGG               TTTTTTTGTTGTCTC 100 35
QR90_RS13170 2811849 .. 2811879 +  -6.8  -3.22223   GCCCAGTGTGACCGT      CACGGTGGCGCCG GGAGCG TGGCG-CACCGCG       TTCATGGTCAGGTTC  50 390
        rplU NONE
        rpmA 2816022 .. 2816051 + -13.5  -3.68988   ACGGCGCACCCCATG       AGGGCCGGAGACC TGCG GGTGTCCGGCCCC        TTGTGTTGCCTGAAG  84 44
QR90_RS13205 NONE
QR90_RS13210 2818696 .. 2818719 +    -8  -3.06133   GCCGCGCGAACGCAT          CTGGGGCAGC ACCA GCCGCACCAG           TTCGATGGGGGCTTC  52 421
QR90_RS13220 2820511 .. 2820551 +  -6.2  -3.55444   CTGTTCGTCCGCCAA CC-CATGTCCCGCGTCCTGG CCG CTAGGATG-GGCGCATGAGG TTTCAAGCATGAACG  57 69
QR90_RS18035 2820758 .. 2820781 +  -3.6  -3.63895   CAGGCGACTCAGCCG          CTGGCCCCGC TGAC GCGCTGCCCG           TTTCAACTCGTTCAC  51 53
QR90_RS13240 2823225 .. 2823263 + -11.1   -4.7629   CTCACGGACGTAGAA  CAGGTGTAGGAGGCGAGT ATTC ACT-GCCTCCCACACCTA   TTTTTGGGTTCCTGG 100 28
        glmS 2828324 .. 2828371 + -16.8  -4.13767   TCTCAAAATAGTGAA GACTCTGGGCCTGGCCGCGCAA GTTT TCGCGCGGCCAGGCCCTCTGGC TTTTGCGCTCAGCCC 100 60
QR90_RS13270 2830103 .. 2830120 +  -8.3  -3.05384   CTCCTGGCAGACTCA             CGCCCGC CTCG GCGCGCG              TTCCCTCCCGGACAC  55 513
QR90_RS13325 2847320 .. 2847336 +  -6.5  -3.49102   TACCGGCAAGGCTAG              CGCGG GTACGGG CCGCG              TTCTGTAGCGCCTCT  57 386
QR90_RS13350 2851097 .. 2851109 +  -5.5  -3.79906   GAGGTGGGACGCGGG                GGGTA GCC TGCCC                TTGTTCTGGCGCTCC  60 20
QR90_RS13355 NONE
QR90_RS13360 NONE
QR90_RS13365 2854525 .. 2854537 +  -4.7  -4.09685   GGCGGGAATCACGCT                GACGG CGT CCGAC                TTTTCCAGAATCGCG  63 333
QR90_RS13375 NONE
QR90_RS13380 2857277 .. 2857296 +    -5   -2.7386   TGCGCCCTATCATTG            GGGGATGAG CGA TTC-TCCCC            TGATTCACCTGGGTT  44 91
QR90_RS13385 NONE
        moaC 2858420 .. 2858452 + -14.1  -2.58861   TTTGAGGGACGACTC      TTCCCGGCGATTGCC CTA GACAGCCGCCGGGAA      CTTCTGGGAATCCTC  71 56
QR90_RS13395 2860314 .. 2860349 + -16.3  -3.69094   TGCTCCGGCCCACAG    GAAGAAGGCCAGAGA ACCAAG TCTCCGGCCTTCTTC     TTTCCATCCTCAATT  93 205
QR90_RS13405 2861468 .. 2861478 +  -2.4  -3.11768   CGGCACTCAGCGGGC                 GTCC GGT GGCC                 TGTTCGGTGATCTGC  43 157
         pgi 2865725 .. 2865744 +  -7.9  -2.75183   AGAGGGCACCGCACT            TCAGACG GCCCCA CGTCTGA             TCCTTCCCTGCACCT  52 49
QR90_RS13430 2867264 .. 2867289 +  -8.2  -3.14931   CAGCCGCCGCTCCAC         CGCCTCTGCC AGCACC GGCAGGCGCG          TTCGTACCGCGTCCA  56 294
QR90_RS13465 NONE
QR90_RS13470 2877699 .. 2877714 +  -6.8  -3.53012   CCACGTCGGCCAGCA              GGGCAG CCAG CTGCTC               TTTGGCCCGGAAGAC  55 85
QR90_RS13480 2879102 .. 2879115 +  -8.1  -5.24799   GGTTTCTACACTCCA               CGTCC GGAG GGACG                TTTTTCTCTTTCTCG 100 334
QR90_RS13520 2886082 .. 2886096 +  -9.2  -4.74103   AGCAGCCGTGACCGT               CGGCTG GCC CGGCCG               TTTTTCCCTTCCCGC  93 30
QR90_RS13525 NONE
QR90_RS13530 NONE
QR90_RS13535 2887363 .. 2887378 +  -6.8  -3.64703   GACTGGAGGCTGGAC              CGAGGGC AAG GCCC-CG              TTTCCGTAGCGCCGG  59 1
QR90_RS13545 2890525 .. 2890543 +    -3  -2.52635   TTAGATCCCGCCGCA             GGCGCG AAATGAC CTCGCC             CTTCGTGATCGGGGT  39 120
         udk 2891509 .. 2891536 + -13.5  -3.57263   AGCCGCGCCGCGTTG        GTGCCGGC-CAG CCAGC CTGTGCCGGCAC        TTTCCAGATAGCCCT  78 387
QR90_RS13560 2893941 .. 2893971 +  -9.6  -3.14132   CATCAGGCGGTCCAG       CGTCGCCTTGGGCA CCT TGGCGAAGGCGTCG       TTGGTGGGGGCGAAG  60 352
QR90_RS13575 NONE
QR90_RS13580 NONE
        murD NONE
QR90_RS13590 2903549 .. 2903582 + -10.3  -2.90496   AGCGCCGGCAGACCA     GGGAGGCGTCAGACGG AAA TTG-CTGACGCCTCCG     TCATTTCGGGAACAC  61 39
QR90_RS13635 NONE
QR90_RS13640 2917414 .. 2917427 +  -2.3  -2.53822   TACCGGCCCAGGCTG               TCCAG CACA CAGGA                ATCTTCTCCAGTCCG  37 47
QR90_RS13645 NONE
QR90_RS13650 2918704 .. 2918734 + -16.2  -5.03314   ACAGTTCAGACGCTG       GGGAGGTTGGGAAC GCG GTTTCCGGCCTCCC       TTTTTTCAACCTCCC 100 60
QR90_RS13655 NONE
QR90_RS13660 NONE
QR90_RS13665 NONE
QR90_RS13670 2922614 .. 2922645 + -13.7  -2.78384   CTGAGCGTCCCAAAA      CAGGCACCCGTTC CACAGA GGCCGGGTGCCTG       TCTGGTGACAGGAAC  72 42
QR90_RS13675 2923795 .. 2923828 + -20.4   -4.8543   CGCAGATCGCAGCAC     GCGGTGGAGGAGGC GAACGG GCTTCCTCCACCGC      TTTTTATACGGATTC 100 42
QR90_RS13680 NONE
QR90_RS13685 2925243 .. 2925271 +  -2.4  -2.63382   CACGCGCCGTATGCT       GG-GATGATATGG CGCC CCGTGTCACCACC        CTTCTGACTGTGGCC  38 77
QR90_RS13690 2926526 .. 2926542 +  -4.3  -3.61398   TGCGGTCCTTCTGGC              CGGCCAC CCA GTAGCTG              TTCTTGCCGCCCAGG  51 482
        argJ NONE
QR90_RS13705 2929996 .. 2930007 +  -3.6  -3.14132   CTGGTGCTTGACCGC                CGTG AAGC CGCG                 TTCCTGGGCCGCGAA  45 248
QR90_RS13720 2933410 .. 2933427 +  -2.5  -3.53012   CACCGCACCCGTCAA             CCCGAGC AGAG GAACGGG              TTTCAGACGCGGAGC  47 76
QR90_RS13745 2941712 .. 2941728 +  -4.3  -3.05384   TTCACTCCCTCTCTG              CGAGCTG TGC CAGTCCG              TTCGGTCAAAAGGAA  45 134
QR90_RS13750 2943326 .. 2943347 +   -13  -3.54475   CCCGACCAAAGGAAA           GCACCCGC CTCAGT GCGGGTGC            TTCTCTGCTGAAGCA  77 54
        lpdA 2948984 .. 2949023 + -14.2  -2.78596   CTGGGCAAGCGTTCA  GGGAAGGGGGGTCAGGCC GTGC GGTCTGGCCCCCGTCTCC   TATCATGCGGGCATG  75 181
QR90_RS13780 NONE
QR90_RS13785 2951339 .. 2951361 +  -2.5  -3.48024   AATTAACCGTCGTGT           CGCCGGTTC CGGAC GTGCGGGCG           TATTTGGTGCTGAAG  47 359
QR90_RS18190 2953243 .. 2953280 +  -2.6  -4.13014   CTCGATCACCCTGAC   CGTTTC-GCCCTGGCTG TCTTT CATCCAGGCCAGCAGCG   TTTTCAGGGTCTGCG  61 178
QR90_RS13810 2955381 .. 2955398 + -10.5  -5.07011   GGTCACCAACTTTAA             CCTCCGC TTCG GCGGGGG              TTTTTGCTTTATATG 100 33
QR90_RS13815 2955624 .. 2955640 +  -9.4  -5.46698   CCAAGGAGCAGAGAA              CCCCGT CTAGT ACGGGG              TTTTTTCGTTTTCAG 100 38
QR90_RS13845 2969971 .. 2969985 +  -2.7  -3.81951   CGGTCCAGAGCTGAC               GGGGG AATTA CACCC               TTTGCTCATCTGCCG  52 514
QR90_RS13855 2972054 .. 2972084 + -12.4  -3.62597   CGCTGCTCTGGCCGG       CGTCGGGGCCAGCC TGC GCCCGGTCCCGGCG       TTCTTCCAGCATCAC  74 445
QR90_RS13870 NONE
QR90_RS13875 2975068 .. 2975082 +  -9.2  -3.31263   GCCCAAGCGCGAAAT               GGGCCG CAA TGGCCC               TTCTGGCCGTGCGCT  63 73
        mutL NONE
QR90_RS13885 2977771 .. 2977785 +  -5.7  -3.65529   CCGTTCGGATTTCTA               GGTGT CTCCA ACACC               TTTCAATCGGAGTCT  57 127
QR90_RS13915 NONE
QR90_RS13920 2984465 .. 2984495 +  -8.4  -4.65895   CACCCCACTTTTTTT      TC-GGCGCTGA-CC TTCGC GGCTCAGCGCCAGA      TTTTTAGCTCAAGGC  86 34
QR90_RS13925 2984724 .. 2984749 +  -7.5   -2.7314   AACGCACTATGATGC         CGGGCG-GCATG TCG CGTGCGCGCCGG         TCCTGTGATTTCGGG  52 151
         tig 2986258 .. 2986283 + -16.1  -4.13654   ACAGCCGATTCAAGA         GGGGCGCGTCC TGCG GGGCGCGCCTC          TTTGTGGTTTAACGG 100 43
QR90_RS13935 2987641 .. 2987668 +  -4.9  -3.53091   TGGCCGAGGCAGGCG        CATGAGCGGC GCGAAAATA GCCGCTC-TG        TTTCCCGGCCAGGGT  53 21
        fabD 2988558 .. 2988573 +  -2.4  -3.02511   CGTTCGGGCTGTGAC              TGGCGT GACC GCGCCC               TCTTCCCGCGCTGAG  41 27
QR90_RS13945 NONE
QR90_RS13950 NONE
        fabG 2990341 .. 2990366 +  -2.3  -3.54459   TTAGCCGTCTGAGGG         CAGGGTGGGGC CACC GCCACTTCCCG          TTTACACCCCGTTCA  49 37
        acpP 2990745 .. 2990771 + -13.6   -4.0162   GGCAGTGGGTCAGGG         CGGGGCGCGGGT CAT ACCGTCGCCCCG         TTTCTGATCTGGAAA  90 78
        fabF 2992073 .. 2992092 +  -2.8  -3.28712   AAAAAGTCTGAATGA            CAGGAAAG CGCA TTGTCCTG             TTCTGGCGGGACGCC  46 56
        ppk1 NONE
QR90_RS13975 2995499 .. 2995535 +  -7.8  -2.83747   TCCCGTGGGCGTCAG    GGGGCCGGTGTAGGGC ACGCA GACCTCCACCGGGCCG    TCGTTATCGGCGTTG  50 358
QR90_RS13985 2996873 .. 2996909 +  -2.2  -2.64933   CCAGGACGGCCCACC   GGCCC-TC-CAACTTGAC AAG GCCATGATGAGAAGGGCC   TAATCTAAGTCCATG  38 49
QR90_RS13990 2998250 .. 2998286 +   -13  -3.48822   CTCCAGCCTGATCGC    CCCACGGCCCGCTC CCGATTGAA GGGTGGGCTGTGGG    TTCTGCCTTGTTATA  76 55
QR90_RS13995 2999841 .. 2999869 + -11.5  -4.59773   GGCACCCGTGTTGAG        CCGCCCTCCCCGC ACC GGGGGCTGGGCGG        TTTTTCGGGATAGGG  95 45
QR90_RS14000 NONE
QR90_RS14005 3001829 .. 3001852 + -14.6   -4.9792   GGGACGCCTCGCCCA          GCCCTCTCCA GTCG TGGGGAGGGC           TTTTTCTGTGAAGTG 100 51
QR90_RS14010 3002677 .. 3002692 +  -2.4  -4.45544   TCGGATGCTGTTTCG              GTGGGG GTAG CGCCGC               TTTTGGTTCCTCCCC  65 238
QR90_RS14020 3006160 .. 3006195 +  -3.8  -3.07816   GCTGACTGACTACCT    GGCGCGGCGCCTGT AGCGCGGA ACGGACGCCCCGAC     TTCAATCCGTCACCC  45 10
QR90_RS14025 NONE
        fabZ NONE
QR90_RS14035 NONE
QR90_RS14040 NONE
QR90_RS14045 3011824 .. 3011847 + -12.4  -4.10161   CGCCATGAACGCCTC          GTCCTCCCAG AGTT CGGGGAGGAC           TTTTAACCGCTCCTG  83 406
QR90_RS14055 3013164 .. 3013211 +  -9.8   -2.5409   TGATGGTCTTTCAGA CGCGGGCGCTGTAGCGGAT-GCA GGC TGCTGTCCCCTACAGCCCCAGCA TCAGTTCCAGGTTCT  59 12
QR90_RS14090 NONE
QR90_RS14095 3020862 .. 3020893 + -13.8  -3.65199   TGACCAGCCAAAGAA      GAAGGACGGGC-CAA TCC TCGCGCCCGTCCTTC      TTTGGCTCGGCGGTT  81 357
QR90_RS14110 3024804 .. 3024846 +  -3.3  -3.35542   GGGACCGGCCTGCGG GGGGTGAGGGGTGCGAAGA ACGGA TTTTCCTATCCCCCGCCGC GTTTTTCCCCCTACA  46 19
        rdgB 3025537 .. 3025555 +    -6  -3.96068   ATCGATCCTTTACCT             TTGCCGTT CTG AACAGCAA             TTCTTCTTACGATGG  62 95
QR90_RS14120 3026178 .. 3026194 +  -2.2  -4.11216   GCGTGACGGCGGGGG              CGCG CTAGCTTTT CGCG              TTTTCGCCCTCGCGC  59 84
QR90_RS14130 3027728 .. 3027742 +  -6.4  -2.83747   GGCCGTAAGGTGCGG               CCATGA TAT TCGTGG               TGGTTGTGGCAGTTC  50 128
QR90_RS14135 3028331 .. 3028370 + -15.9  -4.57569   CGAAAAGCCCGACAA  GAAAGACTGGAG-GCCAC TGAAT GTGGCGCTCCAGTCTCTC  TTTTTGGGGCGGTCG 100 207
QR90_RS14145 3030119 .. 3030171 +  -8.8  -3.16921   TGACAGCCGGCCAGG GCCGCGCCCAGGCTGGCGACGCCGC AGCT GCGCAG-CACCGGCCCCGGCGCGGG TTCGTAGCCGTTGGT  56 477
QR90_RS14155 3032665 .. 3032689 + -13.5  -3.05816   TAGACCAGCAGCTCA          CGCCGTTCGCC GGG GGCCAGCGGCG          TTCCGTCCAGGGTAA  69 235
QR90_RS14175 3036869 .. 3036881 +  -6.9  -2.93991   AGGCGTTGACAAGTT                GGGGG GGT CTCCC                TATACTTCCCTTCGC  50 32
QR90_RS14180 NONE
QR90_RS14185 NONE
QR90_RS14190 3037238 .. 3037262 + -11.5  -5.62219   TTCGGGCACACCAGA          AAAACCTCGTC CTA GACGAGGTTTC          TTTTTTTGATCTGTT 100 28
QR90_RS14195 3038906 .. 3038949 + -14.6  -3.14132   GTAACACATGCGGCG GCCCGGT-GCCTTTGCCTC TGATGTC GGGGCGAGGGCGGCCGGGC TTCCTGCGCCCGGCG  80 37
QR90_RS14200 NONE
QR90_RS14205 3040817 .. 3040829 +  -3.4  -2.94938   CTGTCCACCACCGGC                CTCA AGGAG TGAG                TATGTCGCGTTTTCC  42 14
QR90_RS14210 NONE
QR90_RS14215 3043180 .. 3043213 +  -7.5  -2.87931   ATCTGCCTTAGTGCT     GCCT-CCCAGATGG AAAACCC CCATCTGGGCACGC     TGTCTCACCAGTCCC  53 378
QR90_RS14220 3044199 .. 3044209 +  -6.8  -3.49924   AGCCCCGGACCTGAA                 GGAG CCG CTCC                 TTCTGCTGATTTGCC  57 27
QR90_RS14225 NONE
QR90_RS14230 3047543 .. 3047570 +  -8.2  -3.16921   CACACCCCGGCACAC        CGGCCGACGCGG CCCA CCCCGCCAGCCG         TTCGTCGAGGTTCGT  58 51
QR90_RS14235 NONE
QR90_RS14240 3049058 .. 3049076 +  -5.2  -4.49981   TCCGAAGGAGAGAAT             GGAGGCAT CAG AAGTCTCC             TTTTCTGATGCTGTA  71 146
QR90_RS14250 3052021 .. 3052031 +  -6.8  -2.76689   CCGCTGTGTCCTTCC                 CCAG CCT CTGG                 TCCTATCTGTTGCTC  49 251
QR90_RS14255 3053854 .. 3053868 +    -7  -3.14132   CAGCGCCCGCCCGTA               GCCTGC CGC GCTGGC               TTCCTCGCCCGCCGC  53 513
QR90_RS14265 3055119 .. 3055140 +  -2.2  -3.93038   CCGAGGCCGCAGCGG           GCGGC-CAG CAGGA CTGAGCCGG           TTTGCTGTTCAGGTC  54 9
QR90_RS14270 NONE
QR90_RS17815 3060200 .. 3060226 +  -5.2   -2.5955   ATTTGTCCGAATTGC         TGCATCAGAA AAAAGAC TTCTGATGCC         TCCATTCTCCCAAAT  43 93
QR90_RS18055 3060577 .. 3060591 +  -2.8  -3.85698   CGTGGAGTGTAGAAA               TCGG TGCTGTC CCGA               TTTCTACACGAAACA  56 117
QR90_RS14295 NONE
QR90_RS14300 NONE
QR90_RS14305 3065494 .. 3065520 +  -8.7  -4.80453   CAATCGGCCCAAAAA        CAGCCCCCTGCC ATAT GG-AGGGGGCTA         TTTCTTTTCTGGTGA  88 62
QR90_RS14315 NONE
QR90_RS14320 NONE
        phoU 3069847 .. 3069863 +  -8.1  -3.44319   CCAGCGTGATCTTGC              CTTCAAT TTT ATTGAAG              TTCTGGTCGGTTCCG  58 344
QR90_RS14350 NONE
QR90_RS14355 3075249 .. 3075262 +  -3.7  -4.25104   CCTGCAACTCGTCCA               CCGCG TAAC CGCAG                TTTTCGTAGAACGCC  67 348
QR90_RS14370 NONE
QR90_RS14375 NONE
QR90_RS14380 3078636 .. 3078670 +  -8.5  -3.28712   GCGCGGGTGGTGAGG    C-GGCGTGGCTGACCG CGCG CCGTGGGCCACGCCCG     TTCTGAAGCACAGCA  60 14
QR90_RS14385 NONE
QR90_RS14390 NONE
QR90_RS14395 NONE
QR90_RS14400 NONE
QR90_RS14405 NONE
QR90_RS14410 3084543 .. 3084556 +  -2.3  -3.88498   GACGTGTCAAAAGAG               CTCCC ACTC GAGAG                TTTCGTCTGTCAGAA  54 218
QR90_RS18200 3085702 .. 3085719 +  -4.7  -4.81212   GGGCTTCACACTGAA             TCCACCG CAGT CGGCGGG              TTTTCTTGTGCTCAG  78 99
QR90_RS14455 3091037 .. 3091063 +  -2.9  -4.09739   AAAGACCGGTTGAAA        CAGCCCGG-CTG CATT CAGGCCCGACTG         TTTTGGACCCGTTCC  58 28
QR90_RS18070 NONE
QR90_RS14465 3094369 .. 3094392 +  -5.2  -5.00616   GGGTGGAGGGGAACT          GAGCGGCGGGG AGA CTCAGCC-CTC          TTTTTTCGCCAACAA  83 24
QR90_RS14475 NONE
QR90_RS14480 3096702 .. 3096749 + -10.8  -3.70902   CCGTGAAGCGCTCAG GTTATCCACAGTCT-GTCCACAG CCC CTGTGGATAACTTTGTGGATAAC TTTCAGTCTGGCGAG  76 148
QR90_RS14490 NONE
QR90_RS14495 3099721 .. 3099749 + -10.1  -3.59979   TACTCCGGGAAGCGG        GCCAGCAGCGCCG TTT CCTCGCGGCTGGC        TTTGAAGTGGAACAA  67 86
QR90_RS14515 3103856 .. 3103887 +  -5.6  -3.57144   TGCGTGGTTCATCAT      CAGCCCGCCGGGCT TGAG GGCGCGGTAGGCCG       TTTCGAAGTAGGCGG  54 475
QR90_RS17835 3111132 .. 3111162 + -14.9  -5.04175   TAAGCGAGTTCAAAA       TTGTAGCGCCTGA TGTAT TTAGGCGCTACAA       TTTTTATGTGCTTGA 100 45
QR90_RS17840 3112508 .. 3112533 +  -3.1  -2.78463   CCGGCGCGGGCGGCC         TGTCCACGGCA GGCG TGCGGGGGGCG          TATCCTCGCCAACAT  40 497
QR90_RS14545 NONE
QR90_RS14550 3113434 .. 3113444 +  -2.4  -2.72745   CGCCCTTGAATGAAG                 CGGC TCT GACG                 GTCTTTCTCACTCGC  39 32
QR90_RS14555 NONE
QR90_RS14560 3114797 .. 3114818 +  -2.2  -2.78463   GGACTTCAGAGGGCA           CCTTTCGG GGGCGG CAGAAGGG            TATGCTAGGAGGCGT  39 385
QR90_RS14570 3117704 .. 3117738 + -21.5  -4.48072   GCTGACGGTTCAGAG     GGCAGGGCCGGAATG ACTTC CACTCCGGCCCTGCC     TTTTGTAGTGGATCT 100 42
QR90_RS14590 3121195 .. 3121210 +  -2.6  -3.38812   CTCTATGTATGACTG              GT-AGGA CTC TCCTCAC              TGTTCTTCCCCGCCC  45 22
QR90_RS14645 3131456 .. 3131473 +  -8.4  -5.58179   GTCCAGAAGTTAAGA             CCCCAC CGTTGC GTGGGG              TTTTTTGTTGTCCTG 100 191
        pgeF NONE
QR90_RS14675 NONE
        tadA 3138581 .. 3138591 +  -2.4  -2.92613   CCTGTCGCCCACCAT                 CCCC TCC GAGG                 TACTTTCCCATGACC  40 81
QR90_RS14685 3139873 .. 3139902 + -14.2  -3.79874   TCCAGGCCCCAAAAA       GCCGCCCCGCCG ATGAAC TGGCGGAGCGGC        TTCTCTTCTCTGGGG  88 50
QR90_RS14710 3145764 .. 3145794 + -15.4  -3.63046   CAGGGCAATATAAAA       GGGCGAGGCGGAAT CAA ATCCAGCCTCGCCC       TTATGTGATTCTCCT  86 51
QR90_RS14720 3148400 .. 3148414 +    -7  -3.09327   GTCGGCTATGCCCTG               CGCGGC TGA GCCCCG               TCTTGCCTGACGTGA  51 17
QR90_RS14725 NONE
QR90_RS14730 3151343 .. 3151359 +  -6.5  -3.83502   CCTGGACCGCCGTGT              CATACGG ATT CCGTTTG              TTTCGTGTAGAGATC  65 104
QR90_RS14760 3156302 .. 3156323 +  -9.4  -5.55769   AGGCTGTGAAGAGAA           GGCCGGGA GAAACA TCCCGGTC            TTTTTTGTTGTCCAG 100 57
QR90_RS14765 3157728 .. 3157770 +  -9.1  -3.14211   CAGCACGCCTTCCAG CGGCGCGTTGCCGGTGCG CTCGCCCT TGC-CCAGCAGCGTGCCG TTGATGGCCGCGCAT  56 511
QR90_RS14775 3159874 .. 3159916 +  -4.7   -3.0395   CCACGGGCGCGTTAC GTGGGGCCGTAGCGCGT CAGGCAGGC ATGCGCCCCCGCCCTAC TCTTCCCCGCTCTCT  47 14
QR90_RS14830 NONE
QR90_RS14835 3170975 .. 3170990 +  -3.9  -2.62184   GTATCCCGGCTGACC              CCGCG CTACCC TGCGG               TGGTATGACCCCCGA  41 28
        trmH NONE
        mscL 3172165 .. 3172197 + -13.4  -3.19091   CCTGAAAGGTACTCC     CAGGCGCGGCC-CTC ACTG GGGAGGCCACGCCTG      TTCCTGAGTCCCTCT  76 59
QR90_RS14850 3173590 .. 3173600 +  -6.8  -3.74693   TAGTCGCGCTGAAAG                 TCCG CGT CGGA                 TTTGGTGAGGTACAG  61 87
        lepB 3175607 .. 3175643 +  -4.4  -3.16564   TGCCGCGCTGACCGC   CCCCTGATGGGGGAC CGGGGCAA GTCCTC-ACCGGGGG    TTGCTACCGTCGCCC  47 30
QR90_RS14870 3176655 .. 3176670 +  -2.4  -3.01791   AGCGTGCCCAGAAGG              GCGCCC AGCA GTGTGC               TCTTGCCGCCGCCGT  41 499
QR90_RS14880 3178975 .. 3179031 +   -16  -2.79492   GTCAAACCGTCGAAA AGTCAAACCGTCTAACCGCCAGAAGAC GCAA GCATTC-GGCGGTTAGACGGTTAGACC GTTTGACCTTCAGGC  81 11
QR90_RS14895 3182107 .. 3182127 +  -6.7  -3.53012   ATCGAAACTGATCTT            GACGCCGGC CGC GCGGGCCTC            TTTGACCAGCGACAG  55 486
QR90_RS14925 NONE
        gcvT NONE
        gcvH 3188671 .. 3188695 +  -9.2  -3.48593   TGACGGATGGACCGG          GGCCAGGGTG ACCTG CGCCCTGCCC          TTCTCTCGGCAGGTC  65 69
        gcvP 3191727 .. 3191744 +  -2.1  -4.67904   TTCAGTCGTTGTCAA             GTTTATTC TCG GAA-AAAC             TTTTTAGAATTCCTG  72 124
QR90_RS18435 3193759 .. 3193782 +  -3.2  -4.26076   CTAGCTATCAAACAA          GC-ACAGAAAA ATT TATTCTGTCGC          TTTTGCTCCAGCTCA  64 91
QR90_RS14945 3194125 .. 3194141 +  -5.7  -4.74504   GACGAGAACGTATCG              GCCCGGT TGC GCGGGGC              TTTTTACGTTCCCGT  80 61
QR90_RS14950 3194452 .. 3194471 +  -4.2   -3.5771   AAAGCTGCGGAGCAA            GGTGAGGA AATG TCGTCGCC             TTTGCCCCCGTTTTT  53 41
QR90_RS14955 3195237 .. 3195252 +  -2.5  -3.21099   ACGAGCAGAACGACG              C-GGCG GCCAG CGCCAG              TTCGTCCTGAACCGC  43 0
QR90_RS14960 3196835 .. 3196865 + -11.8   -4.9725   AAGCGGGACAGCAAA       TGGGGCCACTGGAG TTT TTCCGGCGGCTCCA       TTTTTCTGTCGCCCT 100 44
QR90_RS14965 NONE
QR90_RS14970 NONE
QR90_RS17385 3198835 .. 3198872 + -13.5  -3.40597   GCCTGCCAGAGCCAA   GAACAACCGTGTCGGAG CAGT CCGTGACACGGTTGTTC    TCTTTGAATCCGCAG  79 50
QR90_RS17390 3199824 .. 3199847 + -10.3  -3.05844   GAACAGCAATGAACA          GGGCGAG-CC TCACT GGACTCGCCC          TGTTCACCTGCCGCA  62 49
QR90_RS14995 3201806 .. 3201818 +  -4.7  -2.70932   CGCCAGATAGCCCTT                GCGGG TTT CCCGG                TCCTTGAAGGCAGCC  43 481
QR90_RS16935 NONE
QR90_RS16940 3204207 .. 3204245 + -10.4  -3.71998   TAAATCATCCGTCCT CAGGGGACGCAGGTCAGCC TTCG GGC-GGCC--CGTCCCCTG  TTCTGTTCCTCGCTC  74 61
QR90_RS15015 3204610 .. 3204621 +  -5.8   -3.1739   CTCATGAAGTGGCCA                GGGT GGCA ACCC                 TTGATAGGGTGATCT  51 88
QR90_RS15020 NONE
QR90_RS15025 3206052 .. 3206067 + -10.4  -5.29782   CCATAAGGATTTACG              TCGCCC AGAA GGGCGA               TTTTTTGTGCCTGTC 100 100
QR90_RS15070 3217794 .. 3217836 +  -3.5  -3.04322   AGGACAGGTCACAAC GGATGACAGGGCGAT GGGCGGACGATTG ATCAACCTGTCATCC TCTTGCCGCGTTACC  43 54
QR90_RS15075 NONE
        rpiA NONE
QR90_RS15085 3220387 .. 3220401 +  -5.6  -3.14931   TTCGGCGGCCACCAC               CTCCAG CGT CTGGCG               TTCCTCGGGCGTGCC  47 245
QR90_RS15095 3223276 .. 3223299 +  -4.4  -3.79678   CACCTTCACCCTTAA          GCCCTCGCCCC TCT GGAGCG-GGAC          TTCTTGTGGCGCGTT  56 43
QR90_RS15105 3224816 .. 3224840 +  -4.9  -3.12999   TCTCGCCCCTGCTAC          CCTGATGGGCC TAT GGCCTATCAAA          TTGAATATCCGGTGG  48 52
QR90_RS15110 3226450 .. 3226483 +   -19  -4.50627   CGAAGAGGCAAAGAA     GTGGGGCCAGCAGCG GCGAA CGCT-CTGGCCCCAC     TTTCTTTGATCCCTC 100 43
QR90_RS16945 3235577 .. 3235600 + -18.2  -4.30576   AACTGAATCTACCAA          GGCCCTCTCC ATCC GGAGAGGGCC           TTTTGATGATGACCC 100 47
QR90_RS17395 3246432 .. 3246442 +  -8.2  -3.53091   GTCCGCGAAGGGACC                 GCCG TCG CGGC                 TTTCCAGCGCCACCT  61 398
QR90_RS15185 NONE
QR90_RS15190 3252945 .. 3252957 +  -2.6  -2.71364   ACCCGCCGTGCCGCC                CGGC TCGCC GTCG                TCGTTGAAGCGGTAC  39 459
QR90_RS15210 3255013 .. 3255026 +  -2.3  -3.88498   GACGTGTCAAAAGAG               CTCCC ACTC GAGAG                TTTCGTCTGTCAGAA  54 255
QR90_RS18205 3255967 .. 3255996 + -17.3  -2.87132   CGGGGTCTGCGGAGG       CAGCTCGACGTCCC GAA GGGACGTC-AGCTG       TATCTCCAGCGCACA  87 194
        prfB 3263023 .. 3263040 +  -6.9  -3.21099   CGCGGACGACGAATA             GCGCCTC GGAT GAGCCGC              TTCGTGGTCCCGGGC  53 25
QR90_RS15265 3264229 .. 3264262 +    -6  -3.62046   CGGGGGCTGGAATCC     GTTCAAGCGGCGC AAATAGTCA GCGCCGC-TGCAC     TTGTTGGCCCCATCC  57 7
QR90_RS17855 3264579 .. 3264613 + -19.3  -2.62933   GCCGCCCCAAAAAAG     GGGAGGCCCCAGCAT TGCGT GTGCCGGGGCCTCCC     TCCTCTGGCGGCTTA  87 198
QR90_RS15325 3276513 .. 3276523 +  -5.4  -4.77173   ACCCTCTCTTACCCG                 GCAT CTC ATGC                 TTTATTTTATAAACC  78 47
QR90_RS15330 3277354 .. 3277386 + -21.5  -3.16564   CAACAACTCACGAAG      GGAGGGCAACAGAAG CGA TTTCTGTTGCCCTCC      TTCATGGCATAGAGG 100 57
QR90_RS15365 3284931 .. 3284957 + -12.3  -5.47399   GCGCTGGAATCTTGG        GCCTCTCC-CCC GCCC GGGCGGAGGGGC         TTTTTTTGGCGTTGG 100 57
        rpsF 3285446 .. 3285473 +  -2.6  -3.85698   GAGCGTTACGCTCTT        GACAGAACCAAG CCGC CTTGTTACAGTC         TTTCTAACCCGCACA  54 51
QR90_RS15375 NONE
        rpsR NONE
        rplI 3287275 .. 3287296 +   -13  -4.12397   TCTGCTTTGAGAAAG           GCCCCACC CGTTGC GGTGGGGC            TTTCTCGTTCTGTCA  89 56
QR90_RS17405 3287920 .. 3287952 +  -2.7  -3.56092   CCGCCCACTCCCCGC      CCTCTCCTGTC CCAATACAGTA GACAGTGGAGG      TTTCACCCATGCTGA  49 62
QR90_RS15390 3288806 .. 3288836 +  -6.9  -4.56887   GGGGCTAGACTGCGA      GGCGAACGTCCG AATCTAAC CGG-CGTTCGTC       TTTTCTCACTTTTTG  78 136
         rny 3290765 .. 3290782 +  -4.7  -5.45652   TATATTTCTTATATC             ACCGTCC GAAA GGGCGGA              TTTTTTATTGCCAGT 100 174
QR90_RS17860 3295136 .. 3295150 +  -2.8  -2.88959   AAACTAAAATACAAA               GTTCAA TCG TAGAAC               TAATATTTGATATGC  42 34
QR90_RS17865 3295661 .. 3295694 +  -7.3  -5.11937   GGGCATCTTCCGGGC     CAGCACC-TGCGCCGT CCA ACGGCGCAGGGCACAG     TTTTTTGCACTTCTT  93 68
QR90_RS15425 3296086 .. 3296129 +  -2.5  -2.96274   CGTTCAAATCAAAAT CCT-A-G-TGGAGCGGCTTCGC GCA GCGGAGCGGCTCCACCCTCACG TCTCGTTGTGGGCCA  40 21
QR90_RS17410 NONE
QR90_RS17870 3297466 .. 3297479 +  -2.5  -3.82031   TGCCCTAAAAGCATA               TATAT CGCC ATATA                TTTAATCCTAATTCA  52 7
QR90_RS15450 3303195 .. 3303213 + -11.7  -4.57569   CATCCGAACTGAACT             GGGAGGC CACGC GCCTCCC             TTTTTCAGGCCGTGA 100 45
QR90_RS15475 3310983 .. 3311016 + -23.9  -4.82901   CTAGCCAGAACGGCT     GGAGGAGCGGCGCAG ATCA CCGCGCCGCTCCTCC      TTTTTGTCGCCCGCC 100 37
        ybeY NONE
QR90_RS15485 3311961 .. 3311975 +  -2.7  -3.59979   CCAGTCTGGAATCAT               GGCGG CATGC CCTCC               TTTCCCCTGACCCAG  49 83
QR90_RS15490 NONE
QR90_RS15495 3313257 .. 3313271 +  -2.8  -3.85698   CGTGGAGTGGAGAAA               TCGG AGCTGTC CCGA               TTTCTCCACGAAACA  56 117
QR90_RS15505 3317395 .. 3317424 + -19.3   -4.3467   GCAGAAACCAGAAAA       GGCCAGCGAGAGG ACGT CCCCTCGCTGGCC        TTTTGGTGTGCCGCT 100 58
QR90_RS16970 3321929 .. 3321949 +  -5.3  -3.65902   GGTTGCGCCCGTCTG            CCGCCCG CTCACGC CGCGCGG            TTTCGGTCCACTCGC  54 118
QR90_RS15535 NONE
QR90_RS15540 3324899 .. 3324932 +  -4.3  -4.37092   ATCACGGTCTTGCTG     CCGCTCGCGCCCCCCG CAC CGGCGGCCACG-GCTG     TTTTCTGCACCCGCT  67 193
QR90_RS15565 3328371 .. 3328399 +  -6.7   -5.4477   GGATCGTATGGAAGA       TGCAGCC-CCCT TTCAAT AGGGAGGCCGCA        TTTTTTTGAGGATTT 100 58
         gcl NONE
QR90_RS15575 3331323 .. 3331360 +    -7  -3.70902   GGGTCAAGGGTCTGA   GGGTCTAAGAACAGCG CCCCCT CTCTTTCCTTAGACCC    TTTGACTCTCAGACC  62 52
QR90_RS15580 3332324 .. 3332348 +    -7  -3.54424   TAAAGGCTGCGGGAC          GCCGTACGCG GTGCG CGGGAACGGC          TTTAACCGCGTCCCG  59 38
QR90_RS15585 3333694 .. 3333720 +  -8.8  -5.46657   CAAAACGACAAACAG         CATCGAATCC AACAAAC GGATTCGGTG         TTTTTTCTTGCAATC 100 51
QR90_RS15590 NONE
QR90_RS15595 NONE
QR90_RS15600 NONE
QR90_RS15605 3337767 .. 3337782 +  -4.6  -5.06451   CAGGAGAGGCAACTT              CGTGAC ATCG GCCACG               TTTTTTGCCGTCCTG  83 78
QR90_RS15610 3338177 .. 3338204 +   -17  -3.72324   ATCCAGAACAGAGTG        CGGCGATCCCAG CGGG CAGGGATCGCCG         TTATTCCTGGCCCTG 100 82
QR90_RS16975 3341321 .. 3341331 +  -2.4  -2.78816   ACCTCTCCCCCCCTC                 CTGC GCC GCCG                 TCTGCTCCAGACTGG  39 79
QR90_RS15630 3342407 .. 3342428 +  -2.9  -4.72201   GGGTCCGGCGCTCAG           GTTCGACTC GGGT GAGCGGAAC            TTCTTTTTTCTGAAA  73 167
QR90_RS15635 3343125 .. 3343146 + -10.9  -5.68438   CACTACTTCCGCATA           CCTCTCC-CG CAA CGTGGAGAGG           TTTTTTGTTTCATAC 100 45
        crcB NONE
        xseA 3346173 .. 3346187 +  -5.6  -3.01712   ACGCCCGCCAATCCG               CCAGGG TGG CCCTCG               TGTTCGGCGGCGAAG  46 319
QR90_RS15700 3354945 .. 3354973 + -14.6  -4.43477   ATGCCGCCCCGCTGC       CGCGCCCCGACGA GTTG TTG-CGGGGCGCG        TTTTGATTGCCTGAA 100 78
QR90_RS15705 NONE
QR90_RS15710 NONE
QR90_RS15715 NONE
QR90_RS15720 3358533 .. 3358555 + -13.4  -4.89521   TGAGATCACAGGGAG           GGGGCGGC GCTGGAG GCCGCCCC           TTTTCTTTGCACTCT 100 47
        trpS NONE
QR90_RS15735 3361547 .. 3361564 +  -3.3  -3.87815   GATGTTCATGGCGAC             CGCGTTG GCCG CACCGTG              TTTCTGGGCGTAGCC  58 461
        cdaA NONE
QR90_RS15750 3363916 .. 3363934 +  -2.5  -3.02511   ATGAGAGTAGAGTGT            GTCTGGAA CTGA TTCCA-AC             TGTTGCCCAGGTCAA  41 129
        yqeK NONE
QR90_RS15760 NONE
        rsfS 3366518 .. 3366542 +  -5.5  -2.52623   CGTCACCCGGTCCAG          CGTGCGGCCAG CGG CGGCCCGCACC          ATCTTCTCGAAGGCC  42 159
QR90_RS15780 NONE
QR90_RS15785 NONE
        coaD 3368682 .. 3368708 + -10.8  -2.90941   ACTGACGACAACAAA         TGCGCCAGCC CTGATCC GGCGGGCGCA         TCTCTACGGTCTGGT  64 36
QR90_RS15810 NONE
QR90_RS17875 3374129 .. 3374140 +  -7.2  -4.11216   CTGATTCGCTGAGCG                GGCC AGCC GGCC                 TTTTCAAGCTGGGAC  72 29
QR90_RS15835 3377343 .. 3377365 +  -4.1  -4.30576   GCCCGATCAAGTCCA          GCGCCGCTGT GTCC AC-GTGGTGC           TTTTCCTCGTCCAGC  67 142
        xseB NONE
QR90_RS15850 3381257 .. 3381298 +  -4.9  -3.53012   CAATGCCAGTGTGGC GGCCCGCTGGATGCCCAGG TACG CGTGGAAGTCCACCGCGCC  TTTCACACGGGCCAG  52 386
QR90_RS15860 3382566 .. 3382606 + -15.9  -3.03771   GCACCGTCGGCCCCG  CGCCCGACAGCGCCGCGCC CAG GGCGCCGTGCCGCCAGGCG  TCTTCCAGAATGTCG  78 185
QR90_RS15870 3384024 .. 3384051 + -13.4  -4.95896   GTCTTCTCTTCCTAT        GGCCGGGCATCC TTTG GGGTGTCCGGTC         TTTTTCTGCCTTTGT 100 41
QR90_RS15875 NONE
QR90_RS15880 3386208 .. 3386236 +  -7.4  -4.07568   CCCACCCGCTCCGGC       GTG-GCGACGGCC ACCA GTTCGTCGCCCAC        TTTTGCGGCGCGGAA  69 147
QR90_RS15890 3387610 .. 3387630 +    -4  -2.87564   GGCGACGCGGATGGG           CAGCGATGA CTAG TCG-CGCTG            TGTCTGGCCCCGTGC  44 13
QR90_RS15895 NONE
QR90_RS15900 3389651 .. 3389664 +  -5.9  -3.06583   CTCCTTCGCCAGTGC               CTCGG CCAG CCGGG                TGTTCACGGTGTTCT  48 463
QR90_RS15935 3397469 .. 3397485 +  -9.5  -2.62616   TCGAACTCGCGACAT              CTACCTT GGC AAGGTAG              TGCTCTACCAGCTGA  55 462
QR90_RS15960 NONE
QR90_RS15965 3404660 .. 3404670 +  -8.2  -2.79302   CATGATCTTGCTGCG                 GCCC GGC GGGC                 TGTAGTCGCGCTCCT  52 341
QR90_RS15975 3406337 .. 3406360 + -13.8  -4.42238   AAGGCCACGAGAAAA          CCCCCACCCG TTCC CAGGTGGGGG           TTTTCGTTGGACTGC 100 210
QR90_RS15990 3416626 .. 3416640 +   -10  -3.01791   GTGAGGTCTGCACGA               TCAGCG CCC CGCTGA               TGTTGGGCAGCAGGT  59 474
QR90_RS16075 3434757 .. 3434792 +  -4.5  -2.63102   TGCGGTGATGGTGCG    CCCACTGCCAGCGGCG GTAGG CGTCGGCGGC-GCGGG    TCATGTGGGCCTCGT  42 169
QR90_RS16095 NONE
QR90_RS16100 3440903 .. 3440938 +  -8.9  -4.04719   GGTGGAGGCAATCAG    GAAAGCGGCCCCAAC TTATCT GTCGGGGCCACTGTC     TTTCTGATCTCTACT  73 40
QR90_RS16110 3442216 .. 3442246 + -11.9  -3.54488   CAGCGCGGCGTCCAG      TGTCCTGCCCAGCA AGGC TGC-GGGCAGGGCG       TCTTCTTTCACCGCG  71 381
QR90_RS16130 NONE
QR90_RS16995 3446221 .. 3446250 +  -6.3  -4.07568   CCTCCGTGAAGCCCA       GCGCGCCGACCAGC CCA GC-GGTCAGCGTGG       TTTTGCCGGCGCCCA  66 303
QR90_RS16160 3450887 .. 3450917 + -16.3  -3.01712   CACGCCCAGCACGCA       CTTAACCCCTGTC CTCGT GGCAGGGGTTAAG       TGTTACACAGCGAAA  84 39
QR90_RS16165 3453448 .. 3453463 +  -5.4  -4.12188   TTCCTGCACCAGTCT              GGTGGCG ACG CGC-ACC              TTTTCCACGTCCTCG  66 399
        aceB NONE
QR90_RS16205 3464852 .. 3464879 +  -8.4  -4.56775   GTAATTCACAGACTG        AAGGCGTCCATG CCGG TGTGGACGCCTC         TTTTTGCACACCAAT  86 37
QR90_RS16210 NONE
QR90_RS16215 NONE
QR90_RS16220 3468894 .. 3468913 +  -4.9  -2.78776   CGGTTACTGCGGCCT            GGGGCGT AACGCA GTGCCCC             CTCTTTTCAAGACTT  44 17
        allE NONE
QR90_RS16230 3471501 .. 3471528 +  -8.4  -4.30987   ATGAAAAAGAGGAAA        GGCGCATCCA GGAAACAA TGGACGCGCC         TTTCTTATACGGACT  79 46
QR90_RS16240 3475047 .. 3475063 +  -3.5  -4.08945   TTGCGTGTGGGCAGA              CGGGCGC AAA GCCCGCG              TTTTAGAGCAATAGT  58 67
QR90_RS16255 3479623 .. 3479658 + -15.4  -3.06696   GCTTTTAAGACTATC    GAACGGCGCTCACTCC TGCG GGGGTGGGCGCTGTGC     TGTATTCGGCGGGGC  81 41
QR90_RS16280 3482430 .. 3482440 +  -8.2  -3.03159   GACGAAGGGGCCGTG                 CCCG ACG CGGG                 TGTTGAAGGCCTTGG  55 486
QR90_RS16295 3485786 .. 3485809 +  -9.5  -3.53343   CAACAGGTGGGCGGC          GGCGCGGGC CTCGGC GTCTGCGCC           TTTCAAGAGGGGCTT  65 433
QR90_RS16315 3487497 .. 3487531 +  -2.1  -3.35522   AGCAAGAATCGGCCT    GACTTTAGATGGA-GG AAAA CCGTCCACCAAAAGGC     TGTTTCGCACAGTTC  45 24
QR90_RS16320 3487804 .. 3487844 +   -27  -3.03771   TCGCCTGATTCCCCA  GCAGGACGCCACCGGAAG AACTC CCTCCGGTGGCGTCCTGC  TGTTCAGGCGTCTCC 100 33
QR90_RS16345 3492416 .. 3492431 +  -3.2  -3.12803   TGGAAGAGTGGCTCT              GATGGT GAAA ACCCTC               TGTTGCCTCTGCCTG  44 24
QR90_RS16350 NONE
        fumC 3494659 .. 3494680 + -10.1  -3.37056   AGACAGTAAAAAGAA           GACCTGCCG TAAA TGGCGGGTC            TTCTCAATCACTCCT  66 303
QR90_RS16370 3498894 .. 3498924 +  -3.8  -2.63102   CTGAAGGTGGCCGGG       GTCTGATCGAGTAC CGG GTGCGCGAACGGCC       TGATCTGGCCGTGCT  41 20
QR90_RS16375 NONE
        ubiE 3500147 .. 3500169 +  -6.8  -2.73875   CGTCCACGACACGCG           CCCAGTCGCG CGC CACGGCAGGG           TGATGTTGCAGCACC  46 112
QR90_RS16395 3503905 .. 3503924 +   -15  -3.49176   ACGCCGCACCACCAG            CCCCCTCC CAGC GGAGGGGG             TCTTTCATGGCTTTG  83 60
QR90_RS16400 NONE
       coaBC NONE
        argR 3506871 .. 3506883 +  -3.3  -3.55444   CGCCAGCGCCACCAT                CAGCG ACT CGATG                TTTGCCAGCTGCCCG  51 201
QR90_RS16420 NONE
QR90_RS16425 3509994 .. 3510018 + -14.3   -3.6715   CTCCGGAACTTGTTG          CCCCCACCC AACTCGC GGGTGGGGG          TTTCCAATTGAGTGG  85 45
QR90_RS16435 NONE
QR90_RS16440 NONE
QR90_RS16445 3515200 .. 3515231 + -18.1  -3.07344   AAACCTCAAATCAAA      GGAGGGGAGAGGT TTGTAC GCCTCTCCCCTCC       TCTATTGGGCGCTCC  90 39
QR90_RS16475 3521768 .. 3521781 +  -5.3  -3.58269   GAGCGGCTAGAATGC               CTAAC GCCC GTTAG                TTTAGACATCAGTTA  55 127
QR90_RS16480 NONE
QR90_RS16485 3524007 .. 3524021 +  -4.2  -3.02829   ATCACGGCGGCCTGC               GTGCAG GCG CTGAAC               TATTAACGCCCTGTG  45 5
QR90_RS16490 3524371 .. 3524381 +  -2.4  -3.62597   TCGATTCGTGATCCT                 CTCG CCT CGCG                 TTGTTCCCGCCTCCC  49 90
QR90_RS16495 3526146 .. 3526160 +  -4.2  -3.14132   CGTGGAGTGTAGGAA               CCGG CGCTCTC CCGG               TTCCTACACGAAACA  47 139
QR90_RS16500 NONE
QR90_RS16505 3527517 .. 3527556 +   -15  -2.94099   CGCCCGTGCCAGCAA  CTGGCCCCCGGCGG GGCGGGGCATTG ACGCCGGGGGCCAG   TCTGTCCTCGGCACG  77 71
QR90_RS16510 3528961 .. 3528975 +  -6.4  -3.65351   CTGCTCGGATTTCCA               GGTGTT TTC AGCACC               TTTCAATCGCAGTCC  59 127
        dprA 3530428 .. 3530452 +    -5  -3.17325   GACGCGCACGCCCTG          GCGTGTGAAG CGGAC TTTCATGCGC          TCTATTCTGGCCGCT  47 301
QR90_RS16525 NONE
QR90_RS16520 3529790 .. 3529802 -  -3.3  -3.60296   GAGGGCGAGCGCAAA                TCGGG CAG CCTGA                TCACCGCCACCCACG  51 384
        mnmG 3518031 .. 3518054 -  -5.2  -3.53343   AAGTTTCCCGTGAAA          CATCGGTGCC GTCA AGCACCCACG           ACTGCCGACAGCCTA  53 79
QR90_RS16465 3517673 .. 3517685 -  -5.5  -2.52676   GACCGTCGGAATTCA                CAGGC CGT ACCTG                ACTTTCATATCGGCA  45 10
        rsmG NONE
QR90_RS16455 NONE
        parB 3515200 .. 3515231 - -17.4  -4.08919   AAACCTCAAATCAAA      GGAGGGGAGAGG TTTGTACG CCTCTCCCCTCC       TCTATTGGGCGCTCC 100 40
QR90_RS16430 NONE
QR90_RS16415 3506277 .. 3506307 -  -9.7  -2.66964   GCATTCAGGACATCA      TCGCCC-GCGAGAGC GTC GC-CACGCAGGGCGA      ACTGGTGGACTTCCT  55 436
QR90_RS16390 NONE
QR90_RS17000 3500079 .. 3500091 -  -6.9  -3.27476   ACTGGCAACGACTAA                CCGGC AAC GCCAG                ATCAGTTACCAGTCG  55 31
QR90_RS16365 3497169 .. 3497226 - -31.7  -3.30124   TCGGAGGTCCGAGAA GCTCCATTAAAACACATGGGACGACCC AGCC GAGTCGTCCCATGTGCGTTAATGGAGC CCACCACCCCTAGTC 100 51
QR90_RS16360 3494656 .. 3494683 - -11.3  -4.84527   GCGAGACAGTAAAAA        GAAGACCTGCC GTAAAT GGCGGGTCTTC         TCAATCACTCCTGCA 100 72
QR90_RS16340 3489807 .. 3489855 -  -8.8  -4.28361   TGAAGTTCAGCAAAA GAGACCTCCGGCGC-GGC-GCCGA AAG CCGGCGGTCTGCCCCGAAGGTCTG AGGGAAACTCAGGTG  79 34
QR90_RS16335 NONE
QR90_RS16330 NONE
QR90_RS16325 3487429 .. 3487448 -  -4.9  -3.36991   CACCACGCCCAAAGA            CCGCGCT CAGGCC AGCGCCG             AGGTGGGGTTGGGAC  49 438
QR90_RS16310 3486445 .. 3486461 -  -2.9  -2.78384   TTGGCGGTCAGCACA              CCGTCCA TGT CGAACAG              CACGCCTGCCGGACG  40 82
QR90_RS16305 3485818 .. 3485841 -  -4.5  -3.01712   CTGCGCCTTTCAAGA          GGGGCTTGGC GTCAG GCCA-GCCAC          GTCGCCCAGTTCGTG  45 13
QR90_RS16300 3485297 .. 3485313 -  -6.5  -3.14564   GGACGGGGCCATGAA              GCAGCAG CGC CTGCTGA              ACGTGGCTCCGCGCA  50 183
QR90_RS16290 3483290 .. 3483308 - -12.4  -5.86965   ACGGAGCAAAAAAAA             CACGGCGC ACG GCACCGTG             CCTCAGCTTAACGGA 100 348
QR90_RS16285 3481955 .. 3481981 - -10.1   -5.1356   CTGGAGGAAGAAAAA         GGAACCGGGAA GTAAT CTCCCGGCCCC         TCTGCATCCACACCT 100 45
QR90_RS16275 NONE
QR90_RS16270 3480772 .. 3480789 - -10.5  -4.88407   GCAGCCAAGGAAAAA             CCCCCGC CTGA GCGGAGG              TTTCCGGTGTGGTAG 100 35
QR90_RS16265 3480399 .. 3480418 -  -6.4  -4.56775   AGGTCGCCTCAAAAA            GC-TGGGCG GAC CACCCACGC            AGGGCGCCACCGCAG  78 65
QR90_RS16260 3479714 .. 3479728 -  -8.6  -3.65351   GGACTCCGATTGAAA               GGTGTT GAA AACACC               TGGAAATCCGAGCGA  65 219
QR90_RS16250 3476735 .. 3476753 - -13.2  -5.10077   AAACAGCCCAAAAAA             CCTCTCCA CGG TGGAGAGG             CCTGGGAACGCAGAA 100 43
QR90_RS16245 3475016 .. 3475053 -  -6.2  -3.54424   GCTGATCCCCGCAAA   GCACCACGCCAGCCC TTTGCGTGT GGGCAGACG-GGCGC   AAAGCCCGCGTTTTA  57 162
QR90_RS16235 3471494 .. 3471535 -  -9.5  -4.73388   AAGCGGGATGAAAAA GAGGAAAGGCGCATCCA GGAAACAA TGGACGCGCCTTTCTTA  TACGGACTCCGATTG  93 196
QR90_RS18085 3461835 .. 3461845 -  -3.2  -3.02202   GACCTTCAGATAAAG                 CCCA GGT TGAG                 GACGCCCTGCGGTTT  43 5
QR90_RS16195 3459851 .. 3459879 - -23.2  -4.54047   CGATCCGACAGAAAA        CGCCGCCCCGTC ACAGA GACGGGGCGGCG        CTGGAAAGCAGGAGA 100 51
        cysK 3458719 .. 3458734 -  -6.8  -3.63068   GGACAGCACGGCAAA              GCCTGGG TTC CCC-GGC              CAACACCAAGAACGT  59 111
QR90_RS16185 NONE
QR90_RS16180 3456529 .. 3456544 -  -2.4  -2.96274   CTGTTGAGAACCAGA              GTCCAC ATAT GCGGGC               ATTCTCTCAGACAGG  40 115
QR90_RS16175 3455293 .. 3455342 -  -3.6  -2.51872   GTCAGGACAAGAGAC GTGCGGGAGACAGGCAGGAGCAGGC TGG GTCT-CTACTGC--GTCCCGCGCAC CGCGTCCTGCCCCCC  39 8
         pta 3453011 .. 3453027 -  -6.5  -2.62184   GGCGGCCGGACACGA              GGATGGC CCC GGCATCC              GCGCGCTGCTGCATG  45 107
QR90_RS16155 3449863 .. 3449881 -  -2.3   -3.0464   AACCTACTGTCAACA            GCGCCGCC GTAA GGCCG-GC             TACCCTGAAGCCACG  41 58
QR90_RS16150 NONE
QR90_RS16145 NONE
        tsaE 3445606 .. 3445630 -  -4.1  -2.52464   CGCCCTGGCAAGGGA          TTCGCGCGGCG GCC CACCGCCCAAG          GAGCACCCCCATGAT  41 344
        prfA NONE
QR90_RS16120 3442681 .. 3442701 -  -8.2  -3.17212   CCACGAGGTCACGAA            GCGCTCGT CCTTC ACGGGCGC            GGTTTCAGGGCGGGA  58 16
QR90_RS16115 3441978 .. 3442010 -  -5.5  -4.06502   GATTTGTAAACGAAA      CAGACGGAATCCG TTGTAGC CGCAACCCGTCTG      AAACGCGGTTTTAAG  65 36
QR90_RS16105 3440907 .. 3440934 - -12.7  -3.84961   GAGGCAATCAGGAAA        GCGGCCCCAAC TTATCT GTCGGGGCCAC         TGTCTTTCTGATCTC  83 40
QR90_RS16090 3437229 .. 3437250 - -12.3  -5.42265   GCAAACCACAAAAAA           CTGACCCCC CGCA GGAGGTCAG            TTTCAGGAACTCAGG 100 48
QR90_RS16085 3436688 .. 3436745 -  -2.4  -2.87211   AGCGGCGGCGAGACA CGCCACTGCCGCATCACCGCCAGCAAC TCCTC GCGGCTGGCGG-GCGGGGCCAGCAGCC ACCGGGCCGGGGGCA  40 62
QR90_RS16080 3434367 .. 3434379 -  -5.5  -3.86346   GTACTGGCTCAGAAA                CTACG CCG CGCAG                GGCATTCTGGCCCAT  60 293
QR90_RS16070 3431758 .. 3431788 - -10.3  -2.58714   CTGGACAGGAATGGA       CCGCCGCCCCGGA TGGCG TCAGGGGCGGCAT       GGAACGTCCATCACG  59 59
QR90_RS16065 NONE
QR90_RS16060 NONE
QR90_RS16055 3428899 .. 3428914 -  -2.5  -2.61695   TGGACTTGGAAAGAG              GAACG GTCACG CGCTC               ACCTCCTCAAGGCTG  38 16
QR90_RS16050 NONE
QR90_RS16045 NONE
QR90_RS16040 NONE
QR90_RS16035 NONE
QR90_RS16030 NONE
QR90_RS16025 NONE
QR90_RS16020 NONE
QR90_RS16015 3420654 .. 3420665 -  -2.2  -3.03012   AGCAGCGAGAAACCA                GCTG TCCT CAAC                 CCTGATCCAGCGGCC  41 21
QR90_RS16010 NONE
QR90_RS16005 3418266 .. 3418307 -  -8.5  -2.71712   TCCTTGTGTGGAAAG TGCGAGGGGGGCGGGCCAG ACCG CCTGCCCACCCCCTTGGGA  AACTGCCCGTTACTT  54 35
QR90_RS16000 NONE
QR90_RS15995 3416333 .. 3416358 - -12.6  -3.89215   TCGCAGAAATGGAAA         GGCCCTCTCC ACCACG GAAGAGGGCC          AGAACATGGGGCTTC  83 45
QR90_RS15985 3411051 .. 3411061 -  -6.8  -3.65199   AATCTTTCATTGAAA                 CTCC TTC GGAG                 TTGGGTCAAACCGTC  59 127
QR90_RS15980 3406337 .. 3406360 -   -16  -4.47328   AAGGCCACGAGAAAA          CCCCCACCCG TTCC CAGGTGGGGG           TTTTCGTTGGACTGC 100 55
QR90_RS15970 3404463 .. 3404484 -   -13  -4.82667   GCACGACAGCAAAAA           CCCCTCCC GTGTCG GGGAGGGG            CCAGGAGGTTCATTC 100 39
QR90_RS15955 3401040 .. 3401069 - -17.2  -4.38927   CTCCCACAGAAGAAA       GCCCACGACGCG TCTCCG CACGTCGTGGGC        CTCTTCTCCTCCGCA 100 47
QR90_RS15950 NONE
         rrf 3397516 .. 3397535 - -13.6  -4.08767   GCTACTCCCGCAAAA            CATGCGCC GAGG GGCGCATG             GGAAGGGAAAAGAAA  90 44
QR90_RS15940 3397409 .. 3397431 - -14.8  -5.80248   CAACACACAAAAAAA           GCCCCCTCCG GGG CGGAGGGGGT           GGGGTGGAGCGGGAG 100 30
QR90_RS16990 NONE
QR90_RS15925 3393663 .. 3393673 -  -2.4  -2.79133   GAAGCCTTTAGGACA                 GCAG CGG CAGC                 AGGCCGGCCATCGGC  39 7
QR90_RS15920 NONE
        tmpR 3392410 .. 3392420 -  -6.8  -3.55622   CGTAACGTCTCTAAA                 CTCG CCG CGAG                 CCGGGCCAACGGGAA  59 80
QR90_RS15910 3390457 .. 3390499 -  -4.9  -3.72695   AGCGCCGGGACCAAA CGGCAAGGGCGGAAAGCCC TTGAATC GAGCTTCCCGCC-T-GCGG TGGTGTGGTTGGACG  58 41
QR90_RS15905 3389018 .. 3389056 - -14.6  -3.30159   GCAACTGGTTCATAA  CCTGCCCGCCGCC-GCGA TCTTC TGGCTGGCGGCGGGC-GG  CGTGCTGTACACGCT  79 482
        paaI 3385895 .. 3385910 -  -3.2  -3.52192   GCGAAGGGTATAGAA              GGCC GCAGACAG GGCC               AGATGAAAGCGGGGC  49 205
        thrB 3382258 .. 3382276 -  -4.5  -2.52464   TGGGCCGCGAAGCCA             CCAGCCT GCGCG AGGCCGA             GGCCATGCGTGAGGT  42 160
QR90_RS15855 3380509 .. 3380540 -  -3.5  -3.35679   CCGCCCCACCGACAA      GCACGCCACCCGG CTGTTT CTGGAAGGGGTGC       TGGGCGTGCAGGCCG  47 391
QR90_RS15840 3376724 .. 3376751 -  -9.8  -2.56715   ACGGCCAGCAACTCA        GCGTGAAGGCCG CCGC CAGCATCCACGC         CCGCCTGCTGGAGCG  55 510
QR90_RS15830 3375941 .. 3375965 -  -4.1   -2.5934   TTTTAAAGCATCAAT          GCGGGCGCTGA CGG TCAGCGGGCGG          TCACGGGCACGTTCA  41 15
        trxB 3374842 .. 3374873 - -10.9  -3.89695   CGCGCACAAAGAGAA      GTGGGAGACCCGCG TCCTC CGCTG-TCTCCCAC      TCCGTTCGTCCTCTG  79 45
QR90_RS15820 3374209 .. 3374248 -  -2.8  -2.78384   GCCTCTTCCACGAGA  CGCGGCGAGT-CCGGTG CGAGGTT CACCGGCACTTTCCACA  CTGGTCAGCTGAGTT  40 54
         alr NONE
        prmC NONE
QR90_RS15795 3368682 .. 3368708 - -10.8  -4.35885   ACTGACGACAACAAA         TGCGCCAGCC CTGATCC GGCGGGCGCA         TCTCTACGGTCTGGT  89 47
QR90_RS15775 3366978 .. 3366989 -  -7.2  -2.64616   GGGTCACCGACATCA                CCGG GTCA CCGG                 GCCGACGGACGGATT  51 41
QR90_RS15770 3366313 .. 3366345 -  -9.7  -2.54192   CACATCATGACCAAG      GAGGCCCGCGAGTAC TAC GACCTCGAAGGCCTC      TGGAGCGACGCCCGC  55 138
QR90_RS15740 3360608 .. 3360640 -  -3.9  -3.53811   GTGATCGCCCTGAAA      GCCCGGTTGCTGCTG CCC CAGCCGGAGCCGGAA      GCGTGGCCCGAGGAC  51 515
QR90_RS15725 3358632 .. 3358646 -  -2.8  -4.06491   GTAACGCGACAGAAA               TCGG GACAGCG CCGA               TGTCCACACTCCACG  58 178
QR90_RS15695 NONE
QR90_RS16985 3351843 .. 3351853 -  -4.6  -3.16068   TGGGCAACGCAAAAT                 CCCG GCG CAGG                 CCCACGCCGCCTCTC  48 315
QR90_RS15685 NONE
QR90_RS18445 NONE
QR90_RS18440 3349554 .. 3349569 -  -4.6  -4.07885   CAGGGCGCGGGAAAA              GCGGTG CTTT CACGGC               TTCACTGACTTGAGA  63 27
        argH NONE
QR90_RS15670 NONE
QR90_RS15665 3347035 .. 3347051 -  -5.7  -3.39556   AACGTCGGAAGAATA              GCGCACG TCC CGCGCCC              GCAGACGGCCTTCCG  55 44
QR90_RS15660 3346399 .. 3346410 -  -5.8  -3.31144   GGGTCATGCGCAGAA                CCTG GGGG CAGG                 ACGCAGGACGCGGTG  52 91
QR90_RS15655 3345762 .. 3345813 - -11.5  -4.25104   GGTGCGGGATGAAAA CGGCCAGCCGGTGACCCG-CGCCGC AACG GTGACGGCGGGGCAGCGGCTGAC-G CTGGAATGGCAGGAC  85 75
QR90_RS15640 3343187 .. 3343201 -  -4.2  -3.14132   TGTTTCGTGGAGGAA               CCGG GAGAGCG CCGG               TTCCTCCATTCCACG  47 117
QR90_RS15620 NONE
QR90_RS15615 3338172 .. 3338210 -  -8.1    -3.281   CGCGAATCCAGAACA  GAGT-GCGGCGATCCCAG CGGG CAGGGATCGCCGTTATTC   CTGGCCCTGAAGCCG  60 74
        rpmH 3327218 .. 3327263 -   -17  -3.40597   GTCCCCACGCAAAGA GTCCAGCGCCAC-C-GG-ACGGC GGG GCCGTGCCTGCGTGGCGCTGGGC TGTTCAGGAGGAGCG  93 65
        rnpA NONE
        yidD NONE
        yidC 3324763 .. 3324787 - -14.9  -5.40072   CGTCGCCCAAAAAAA          CCGCCCTCCCA GTT CGGGGGGGCGG          GCAGGTACGGCTCAG 100 43
QR90_RS15530 3322363 .. 3322374 -  -7.2  -3.53343   AATCGCGGGGTCAAA                CGGC CACC GCCG                 CCTTGATGTGCGGGT  60 9
QR90_RS15525 3321837 .. 3321854 -  -6.3  -3.29461   CAACGGTGGTCATAA             GAC-GAGG CAC CCTCAGTC             TGGCTGCCGATTCCC  55 20
         der 3317877 .. 3317908 - -10.2  -3.71649   GTCTGAAAGGGGAAA      CGGCGCTCAACCC CCCACTT GGG-TGAACGCCG      TTTTAGTTTTAAGGT  74 51
QR90_RS15510 3317390 .. 3317429 - -21.6  -3.05274   GAAACGCAGAAACCA  GAAAAGGCCAGCGAGAGG ACGT CCCCTCGCTGGCCTTTTG   GTGTGCCGCTACAGC 100 34
        ftsH 3313377 .. 3313400 - -11.7  -4.11216   GGCCCAGCCGCAAAA          CGCCCCACC CGTCAC GGTGAGGCG           CTGTCGCGGTTCAGG  86 51
QR90_RS15470 NONE
QR90_RS16965 NONE
QR90_RS15460 NONE
QR90_RS15455 3303037 .. 3303065 -  -9.5  -3.14344   CACCGTGCTGAGCAA        GGACAACGGCAAG CGC CTGGCCTTTGCCC        AGAACGACAACCAGT  60 178
QR90_RS15445 NONE
QR90_RS15440 3300541 .. 3300568 -  -5.4  -3.78775   GTGGGGACGAGGAAA        CGGCAGCAGGCG GCCC CGCCTCCCGACA         GGGCGGCAGGAAAAG  58 229
QR90_RS15435 3297068 .. 3297078 -    -4  -4.12942   TCAAACGGCCTAAAA                 TTCA TGA TGAA                 GTATGCTACATCAGA  63 439
QR90_RS15420 NONE
QR90_RS16960 NONE
QR90_RS15410 3293166 .. 3293180 -    -7  -3.63569   GCAATGGTTGAAGAA               GGGGCG GGT CTCCCC               CACTGCGGCTCAGTT  59 35
QR90_RS15405 NONE
QR90_RS15400 3291141 .. 3291154 -  -5.9  -2.87211   ATCGTCGCGGACAGA               CGCCC ATGA GGACG                CTGCTCCTCCCCCTC  48 317
        ftsE 3282597 .. 3282616 -  -5.6  -2.62616   GCAGGTGGTAGATCA            CTGGCCGCC CCT GGCGGCG-G            TGATGGTGGATGGTG  46 98
QR90_RS15355 NONE
QR90_RS15350 NONE
QR90_RS15345 NONE
QR90_RS15340 3278537 .. 3278564 - -15.6  -5.06052   TCAAAAAACACAAAA        GACCCGGCACGC CTTC ACGTGCCGAGTC         TCGCCGTTTCAGAAA 100 207
QR90_RS15335 3277345 .. 3277393 - -17.1  -3.62046   TGACCTGCTCAACAA CTCACGAAGGGAGGGCAACAGAA GCGAT TTCTGTTGCCCT-CCTTCATG-G CATAGAGGCCAGCCT 100 99
QR90_RS15320 3275211 .. 3275222 -  -7.2  -3.57119   GACACATCGGCGAAA                GGCG TGCG CGCC                 GCCCACAACGCCATA  62 114
        wbaP 3272849 .. 3272860 -  -2.2   -3.6682   GCCCAGTCATGCAAA                CACC CGTT GATG                 ATGCCCACACCGCAG  49 137
QR90_RS15310 NONE
QR90_RS15305 3270383 .. 3270434 -  -4.2  -3.67597   CTGTGCAGCGAAGAA CCGCCCCCTCGGCCCCGCTGAACA TTCC TGGTCAGGCGAGCGGAAGAGGAGA ACCTGTCCCCCAATG  53 49
        ispF 3269718 .. 3269752 -  -5.7  -3.04792   GCACGACGTGCAACA    GCGGCGTCACTCAGTC CTGC AACTGCGTGA-GCAGC     GCGGTCACGCGCGTC  49 1
QR90_RS15295 NONE
QR90_RS15290 3267874 .. 3267889 -  -3.2  -2.93853   GCTCCTTAATGAAAT              GTCACG CTTC CTTGAC               CAAGAGTAAGACACC  42 112
QR90_RS16955 NONE
QR90_RS15280 NONE
QR90_RS15275 3265405 .. 3265419 -  -3.5  -2.89564   CGTGGAGCGTAGAGA               TCGGA GCTGT CCCGA               TGTCTGTCGCGTTGC  42 55
QR90_RS15270 3264578 .. 3264614 - -17.3  -5.00616   CGCCGCCCCAAAAAA    GGGGAGGCCCCAGCA TTGCGTG TGCCGGGGCCTCCCT    CCTCTGGCGGCTTAC 100 37
QR90_RS15255 3259766 .. 3259806 -   -14  -4.37092   ACGCTCGCCACAAAA CAGC-GCAGCGCCCCCAAC GGGT GTTGGGGGCGCTAAGGCAG  AGAAATCAAACCCTC 100 74
QR90_RS15250 3259414 .. 3259432 -  -5.9  -3.54424   GGCCAGCTTCGGAAA             CGGGGGA ATCCG TCACCCG             CCCAGCTTACTTCAG  57 37
QR90_RS15245 NONE
        folP NONE
        folB 3257298 .. 3257312 -  -5.6  -3.05384   GCGCGGGGCACTCAA               GGCGCA GGC TGCTCC               AGCGTCAGCTCGGCG  49 7
        folK 3256725 .. 3256759 -  -5.6  -2.78384   TCGCTCCGTAGCATA    GCGCCGCCGTCC-CCG GCAGA CGGTGGGCGGCCGC-C    AGATTCATAACGGCA  46 45
QR90_RS15225 3256172 .. 3256194 -  -5.5  -5.41746   AATGCTCTAAAAAAA           GCCCTCTCC GCCGG GAAGAGGGT           GGGGGCCGGCAAGCC 100 48
QR90_RS15205 NONE
QR90_RS15200 3253191 .. 3253204 -  -3.7  -2.62983   CTGACCTCTACAGCA               GCCCG CGTT CGGCC                AGATGACGGCGCGCG  41 4
QR90_RS15195 3252475 .. 3252487 -  -4.7  -3.14132   CCCTGCCGTGACCAA                TCGCC TGC GGCGG                GCCGCCGGTCAGCGC  48 96
QR90_RS15180 3247310 .. 3247324 -  -9.2  -3.21099   TTGCTGCACGACCAA               CGCCGG CTG CCGGCA               GGTCCCCTGGGCTTC  61 288
QR90_RS15175 3246025 .. 3246040 -  -8.2  -2.59742   CCCAATGCCGACAAT              GCCGCG CCTG CACGGC               TTTATTCAGCGGTCC  53 27
QR90_RS15165 NONE
QR90_RS15160 3241893 .. 3241906 -  -2.3  -3.54424   GGTGAGGTTCGGAAA               TCGTC TGGA GACGG                ATGTGGAGCAGGACA  49 50
QR90_RS15155 3240850 .. 3240882 - -12.7  -3.96216   TGTGCAGCGAAAGAA      GGCGTCCCCGAAACA CAG TTCTCCAGGGACGCC      TTTCCAGCCCCACCG  83 44
QR90_RS15150 NONE
QR90_RS15145 NONE
QR90_RS16950 3235577 .. 3235600 - -18.2  -3.22656   AACTGAATCTACCAA          GGCCCTCTCC ATCC GGAGAGGGCC           TTTTGATGATGACCC  91 291
QR90_RS15130 3230297 .. 3230334 - -17.1  -4.54821   AGGCGAATGAGAAAA  GGCGCG-GGAGG-CCGG ACTGAA CCGGACCTCCACGCGCC   GCCTTGAAAAGCATG 100 81
QR90_RS15125 3229199 .. 3229234 -  -6.9  -3.05844   GGGGGGAGGGGAACA   GACGC-GCCTGCTCAGCG GGC CGCAGAG--GGCAGCGTC   CACAGCAGCACGTTG  51 1
QR90_RS15120 3227733 .. 3227750 -  -8.3  -3.58037   GACGAACGGGTGAAA             GCTGGCC CGGC GGCCCGC              CGCGACACTGACCGT  65 58
QR90_RS15115 3226450 .. 3226483 -   -19    -4.011   CGAAGAGGCAAAGAA     GTGGGGCCAGCAGCG GCGAA CGCT-CTGGCCCCAC     TTTCTTTGATCCCTC 100 44
QR90_RS15100 3223096 .. 3223141 -  -7.5  -3.78934   CGCCCGCCACAACAA GCC-GCG-CGCGGGCC-GCGTG CTGAT CGCGCAGGGCCGCGACGCCAGC GACGTGGCCTTTTCC  64 284
QR90_RS15090 3219850 .. 3219868 -  -5.8  -3.05384   GCCCTGCTGAGGGAA             CGCGGCTG GTC CTCCCGCG             CCCGCTACTGGATCG  48 358
        pulA 3214123 .. 3214133 -  -5.4  -2.86271   CCGTCACGAGAACGA                 GGAA GGT TTCC                 CACTCACTTGCCGAC  46 29
QR90_RS15060 3213349 .. 3213361 -  -3.3  -4.18018   TCCTTTCATTGAAAA                CCTCC AGG GGAGT                GCCAAGTACGGATGT  61 236
QR90_RS15055 3212365 .. 3212392 - -13.4  -3.69354   GGCCACAACGGGAAA        GGGCAGCGGGTG AGGG CACCCACTGGCC         CCTTCCACTGCCCCC  84 55
QR90_RS15050 NONE
QR90_RS15045 NONE
QR90_RS15040 3209018 .. 3209060 - -12.8  -3.71649   CGTCTAAAGGTCAAA GGGTCTGACGGTCAAACCGT CTA ACGGTCTAACCGTCAAATCG CTGAGGGGCTTCGCC  81 125
QR90_RS15035 NONE
QR90_RS15030 3205556 .. 3205588 -  -8.4  -3.56643   CCCAGACGCTGGAAA     CGCCCGCTGCAGCCCC GCC AGGGC-GCAG-GGGCT     GGAGCATGGGGCTGG  63 520
QR90_RS15000 3200874 .. 3200890 -  -2.9  -3.92522   TCTGAACCTCAGAAA              CCCGG CGAGCAC CCGAG              GGGCGAGATGGGCGG  56 482
        msrB 3199818 .. 3199853 - -19.9  -3.40163   CATGAGGAACAGCAA    TGAACAGGGCGAGCC TCACTG GACTCGCCCTGTTCA     CCTGCCGCAGCTTCA 100 38
QR90_RS14920 NONE
QR90_RS14915 NONE
QR90_RS14910 3183366 .. 3183381 -  -2.5  -3.28712   CCCTCCGGGTCAGAA              CAGCC GCAGAA AGCTG               ACCGTCGCCGGATCG  45 4
QR90_RS14905 NONE
QR90_RS14900 3181621 .. 3181640 -  -2.7  -3.40403   GGGCCGTCACGACAA            CCACCCC GTACCT GTGGCGG             CGCTGAACCCTGCGC  47 42
QR90_RS14890 3179989 .. 3179999 -  -2.4  -2.93572   ACTCAGTGGAGAAAG                 GCTG GAA CCGC                 GCACCGCCTCTCGCG  40 56
QR90_RS14885 3178976 .. 3179030 - -21.7  -4.12942   TCAAACCGTCGAAAA GTCAAACCGTCTAACCGCCAGAAGAC GCAA GCATTC-GGCGGTTAGACGGTTAGAC CGTTTGACCTTCAGG 100 48
QR90_RS14875 3175983 .. 3176002 -  -6.3  -3.14564   GCAGCTGTCCAGCAA            GGCCGCC CGCTAC GGCGGCG             TGGGCGGCAGCGAGC  50 170
QR90_RS14860 3174364 .. 3174380 -    -3  -4.07568   TTGCGTCCGTCAAAA             GACGCAG GCAT CTGC-TC              AGACCATGAACTGCG  58 94
QR90_RS16930 3173134 .. 3173146 -  -4.7  -3.53811   CGCAGGGGCTCGAAA                CGCTG GCG CTGCG                GCTGTCGCGCGAGTG  54 426
QR90_RS14825 3168527 .. 3168543 -  -6.5  -3.48593   CAGCGCTGTAGAGAA              CACGCCT GTA AGGGGTG              CCGTCAGCGCGGCCC  57 29
QR90_RS14820 3167379 .. 3167403 -  -9.1  -3.59979   GTCGGGCAGGGTAAA          GCATGGCGGCG GGG CGACGCCGCGC          ACTCAACCTTCACGG  68 59
QR90_RS14815 NONE
QR90_RS14810 NONE
QR90_RS14805 3164740 .. 3164753 -  -3.7  -2.79878   TCCATCTACTCAAAT               CGGCG CGTC CTCCG                CGAAGTTCGGGGGGC  42 6
QR90_RS14800 NONE
QR90_RS14795 3163160 .. 3163189 - -17.9   -4.7497   GGGAGCCACCAAAAA       GAGGGGCAAGGCC CGCA AGCCCTGCCCCTC        TCAACAACCCTGGGT 100 41
QR90_RS14790 NONE
QR90_RS14785 3161008 .. 3161049 - -12.1  -4.08064   AACTGGTTTGCAAAA CGCCTGCCCCGTGCGCGGC CAGC GCAGCACGTAGAGCAGGCG  GAAGTGCGGCTCGGG  83 46
QR90_RS14780 3159714 .. 3159732 -  -3.8  -3.03771   CGAGACGGGCGAACA             CGCCAA CATCGAT CTGGCG             CTGGCCGCGCTGACA  43 206
QR90_RS14770 3157017 .. 3157046 -  -6.3  -3.61398   CCTGCGCCCTAAGAA       TCCGGCGCTGA TTCTGGCC TCCGCGCCGGG        CGACACGCTGGGCAA  57 227
QR90_RS14755 3154500 .. 3154510 -  -4.6  -2.52464   CCCGGTGGGAATTCA                 GCCG TCC CAGC                 GCTGCTCACCCGCGC  43 88
QR90_RS14750 3153527 .. 3153540 -  -5.2  -3.05844   CGGCTTACCGTAACA               CCCG GGAAGG CGGG                CATGTGCGGGTCACC  47 75
QR90_RS14745 3152846 .. 3152875 -    -7  -4.12902   GAAGCAGCGGGAAAA       CAGGCTGCGCTC TAGCCG GTCCGCAGCCCG        CCGCGTAGCAGTTCC  69 7
QR90_RS14740 3152044 .. 3152075 - -15.1  -2.61274   CGCAGTCTAATGAAT      GGAGGCCACCCGC GCGTCT GCGGCTGGCCCCC       GTACCTCGCGGTGCG  77 71
QR90_RS14735 3151069 .. 3151127 -  -9.5  -3.25823   GCTGCGCGAGATCAA GGCCGACCCGGC-GCTGGGCAGCATTCCG GTC CTGA-TGCTGACCACCAGCCAGGCCGACG ACGACGTGCGCCACT  63 377
QR90_RS14715 3145764 .. 3145794 - -17.6  -4.67608   CAGGGCAATATAAAA       GGGCGAGGCGGAAT CAA ATCCAGCCTCGCCC       TTATGTGATTCTCCT 100 41
QR90_RS14705 NONE
        clpP NONE
        clpX 3142432 .. 3142485 -  -9.6   -4.4773   GGACATGAATGAAAA CGACACCCCCGCAGGGTG--TCCCAG AATT CTAGGAGTCACCGCGCGGGGATGCTG TAAGCTCGGTTGCCT  91 42
         lon 3139873 .. 3139902 - -15.7  -4.58395   TCCAGGCCCCAAAAA       GCCGCCCCGCC GATGAACT GGCGGAGCGGC        TTCTCTTCTCTGGGG 100 41
QR90_RS14665 3133500 .. 3133510 -  -2.4  -2.62396   CATGGGTTCAGAGTA                 CGCC CTT GGCC                 GGAGAGGGACGGTGA  38 90
        guaB 3131914 .. 3131957 -  -4.3  -2.78596   GAGGGGTGCAGGAGA TGCACTCGCGGCTCAGCTG TGCGGG CAGCGGGGCGGCCAGCGCC CGAAGGACTGGCTTA  42 38
QR90_RS14655 3131397 .. 3131415 -  -5.2   -4.4767   GGAGGCATCAGAAAA             GGAGACTT CTG ATGCCTCC             ATTCGCCCAACTGCT  71 106
QR90_RS14640 3129122 .. 3129136 - -11.4  -3.05935   ACAGGGCGGACTGAA               CGGCTG TGG CAGCCG               GGGCGCCTCACAGGA  66 171
QR90_RS14635 NONE
        purS NONE
QR90_RS14625 NONE
        purQ NONE
QR90_RS14615 NONE
QR90_RS17845 NONE
        purL NONE
        purF 3122143 .. 3122160 -  -9.8  -3.66178   GGGCGGAATGTCAAA             GGCCCC GATCAG GGGGCC              ATCAACGTCCAGACG  70 61
QR90_RS14595 3120715 .. 3120745 -  -5.9  -3.05384   GCTGGGGCCACCCAA       GCGCCAGCGGCAG TTTGT CAGCGGCGAGCGC       CTGCGCCTGGTGGGA  48 462
QR90_RS14585 NONE
QR90_RS14580 3119866 .. 3119909 -  -3.6  -3.63627   CCTCCAGATGGGAAA GCGGGAGCAGTGGCAGACGC CGAA GCGTTTCCCACAGTTTACGC CCCGGACATAAGAGG  51 80
        uvrB 3117822 .. 3117833 -  -7.2  -3.15999   CGCCGACAGAGGTAA                GGCG TTAC CGCC                 GACCGCGCGCCCGCA  56 18
QR90_RS14565 3114429 .. 3114461 -  -7.5  -2.57132   GCGTTCCTGCACAAT      CTGAGCTGACCGGCG GCG CGGCGGGACGCTCAG      GCGTGAATGCGGCGC  51 45
QR90_RS14540 3111572 .. 3111587 -  -5.4  -2.87529   TCATACAGGAAGAAT              GGATAC GGCA GCATCC               TGTATCAAAGTCAAG  44 517
        aceE NONE
QR90_RS14530 3105744 .. 3105774 - -19.8  -3.31133   AGAATCACGACAACA       GGAAACCCCCGCCC ACC GGACGAGGGTTTCC       CTGTTCAGCCTGGGT  95 40
QR90_RS17830 3105015 .. 3105036 - -10.1  -5.03994   GGCCAGAGACAAAAA           TCCCCGCCA CAGT CGACGGGGA            TTCTGCGGATGTCAT 100 185
QR90_RS14520 3103109 .. 3103125 -  -3.5  -3.61715   CACGCCCGGCAACAA              CCTGGGC GCG GCGCTGG              CCCACGCCAAACTGA  51 348
QR90_RS14510 NONE
QR90_RS14505 NONE
QR90_RS14500 3099217 .. 3099230 -  -3.1   -3.6682   GGCGAGGGATTCAAA               GC-CGA GGT TCGCGC               CTTTCTCGGCAGCCT  50 452
QR90_RS14485 3096389 .. 3096429 -  -6.6  -3.57144   CGCTGGACTGGGAAA  GCCTGCGGGCCACGTTCC CCCCC GGCACGTGGCTGGCCGGA  GGGCTGGGGCCGTGG  57 348
QR90_RS14470 3094146 .. 3094202 -  -4.7  -5.15634   GAGGTGATGAAAAAA CGCCGCACCCCGCTGGCCAGTTACCGC ATT GAGGTCGAGGGCCAGCGGGCCGACACG GACCCCAAGCGCTAC  87 207
QR90_RS14450 NONE
QR90_RS14445 3088868 .. 3088901 - -11.7  -4.61873   CGGCAGAAAGGAAAA     TGCGCCGCCAGAGCA AAAA CGCTCTGATGACGCA      GCCTGAAAACGGGAG 100 53
QR90_RS14440 NONE
        mltG 3086711 .. 3086735 -  -2.6  -2.88861   GAGGATCTTGAGACA          CCCCCGGCCG GCCTG CGGCGGTGTG          GCCCTCAGCCCGCTA  40 38
QR90_RS14430 3086244 .. 3086260 -  -7.9  -4.07885   CACTTCCGGGTAAAA              CAGCGGA TCA CCCGCCG              CCGAGCCCAGCGCGA  70 221
QR90_RS18425 3085399 .. 3085416 - -12.7  -4.25283   ACCTGGCGAGGAAAA             GCCTCGC ATTC GCGAGGC              TGAGGATTCACCGGG  88 340
QR90_RS16925 NONE
QR90_RS14360 3074797 .. 3074809 -  -6.2  -3.53444   CTACCGCCCGCTAAA                CGCC TTCTG GGCG                GCGCGGGGGTACGTC  55 144
QR90_RS14345 NONE
        mutY NONE
QR90_RS14335 NONE
QR90_RS14330 3069480 .. 3069493 -  -4.5  -4.24948   CGACCACATGGAAAA               CGTCGC CGA GCG-CG               TGCGCTACTGGGTCA  69 74
        metK 3065494 .. 3065520 - -10.9  -4.58283   CAATCGGCCCAAAAA        CAGCCCCCTGCC ATAT GG-AGGGGGCTA         TTTCTTTTCTGGTGA  95 248
        minD NONE
        minE 3060704 .. 3060743 - -26.6  -3.57651   TGCCAGACCATAGAA  CAGCCGCGCCGCCAAACCT GAC AGGT-CGGCGGCGCGGCTG  CAGCAGTCTGCGGCG 100 53
QR90_RS14280 NONE
QR90_RS14275 3057464 .. 3057487 -  -9.5  -2.60723   GCAGGGCGAATGAAT          TCCGGGCCG GGGCGG CGGACCGGA           CAGAACGCGGTGTCA  56 87
QR90_RS14260 3053238 .. 3053269 - -11.4  -2.57132   GCGCGCCCCTACAAG      CCGGCCTGGACCCG CGAC CGCGCCCTGGCCGA       GATCCGCTCGCAGGC  59 133
QR90_RS14245 3048678 .. 3048689 -  -3.6  -3.63922   AGGCGCCGGAAAAGA                CCGC CACC ACGG                 AAGCGCTGCCCGCCG  51 443
QR90_RS14170 3034160 .. 3034185 -  -9.7    -4.323   TCTAAACAGGGAAAA         GGGCGACCA GATACACT TGGCCGCCC          TCGCGCCTGCCCCTT  83 103
QR90_RS14165 3033015 .. 3033049 - -17.3   -4.4267   TCTGAAAAGCGAAAA    GAGCAGGGCAAC-CTC CGGA GAGAGTCGCCCTGCTC     GGTCACCGCACTGTC 100 39
QR90_RS14160 NONE
QR90_RS14150 3029414 .. 3029428 -  -8.5  -3.03159   CCAACCGGGGCAACA               GCGGC TTTCT GCCGC               ACGAGCGCGAGTGGA  55 292
QR90_RS14140 3028322 .. 3028379 - -17.2  -4.11216   GCTCTAGGCCGAAAA GCCCGACAAGAAAGACTGGAG-GCCAC TGAAT GTGGCGCTCCAGTCTCTCTTTTTGGGG CGGTCGGCAAAAGCA 100 87
QR90_RS14125 3025705 .. 3025721 -  -6.5   -3.4072   CAGCGGCGACCACAA              GCCCACC CCG GATAGGC              ACAGCATCGCCCCGC  55 486
QR90_RS18420 3022732 .. 3022745 -  -3.1  -2.71712   CGGGTTCCCGGAAAT               CTG-GC CGC GCACAG               GCGCTATTTAGACAA  40 29
QR90_RS14100 3020862 .. 3020893 -   -16  -3.97674   TGACCAGCCAAAGAA      GAAGGACGGGC-CAA TCC TCGCGCCCGTCCTTC      TTTGGCTCGGCGGTT 100 39
QR90_RS14085 3017580 .. 3017591 -  -2.2  -3.03124   TGGGACCGCTGAACA                CACC CAGA AGTG                 TACCGTTTGCAAGGC  41 112
QR90_RS14080 3016394 .. 3016427 -  -6.5  -3.15249   CAGATTGCTCAGGAA     GTCGCGGCCCGCC ATCACTGG GGCGGGCAGGGTC      TCCGACGTCAGCAGA  53 223
        argF NONE
QR90_RS14070 3014954 .. 3014989 -  -2.4  -2.57344   CAGGTGGCGCAGAAC    GACGCGATGG-GCGCTC ATG GAAAGCACCGCCGCACC    AGCTCGGCCAGATCG  38 4
QR90_RS14065 3014327 .. 3014343 -    -3  -4.19953   GAGCGAAGGCGAAAA              TGCTAC CGTCC ATAGCA              CCGACATTTTCTCCA  61 120
        argC 3012799 .. 3012822 -  -4.5  -4.13767   GGGGGCACTGGAAAA          CCTGCGCGCC CATCT GGTGC-CAGG          GGGCCAGTTCGCCTT  66 401
QR90_RS14050 3011372 .. 3011384 -  -4.7  -3.53091   AGCGGCGCCCCGAAA                GTGGC CGA GCCGC                GGCTGAGCATCCTGA  52 81
QR90_RS14015 3002199 .. 3002237 -  -2.8  -2.89683   AGCTGACGCCACAGA   CGCCGCCCGCCGTGCTGT ACC ACGGCACGTTTCCCGGCG   CGTTGCCCGCCATTC  40 512
QR90_RS13980 2994813 .. 2994855 -  -6.2  -3.83026   CTGGCGTACATCAAA CGCACCGGCTGGGGCAGC GTGGGCA ACTACAACAGCCAGTACG CGGCCTACGCCTTCA  63 417
QR90_RS13910 2982581 .. 2982595 -  -3.4  -2.94099   GGGGGGCAGCATAGA               GGGTCA GAT CGCCCC               TGATCCTTTTCAGCC  42 122
QR90_RS13905 2981330 .. 2981363 -  -8.7  -3.53811   TCTACCGCCTGGAAA     GCGCGGGCCGCCG-GA GCC TCGCGGTGGCCTGGGC     GCGGTGGTCTGGGCG  65 58
QR90_RS13900 NONE
QR90_RS13895 NONE
QR90_RS18050 2977462 .. 2977487 -  -8.3  -4.35116   CACCCCAGAGGAAAA         GGACGCCGAGAG CGG CT-TCGACGCCC         CCATGCTGTACTACC  78 337
QR90_RS13865 NONE
QR90_RS13860 2971208 .. 2971226 -  -6.7  -4.11216   GGGTGACCCGGAAAA            GGGC-TGC AGCT GCACGCCC             TCCGAGCGGGCGCGG  69 464
QR90_RS13840 NONE
QR90_RS13835 2963958 .. 2963975 -  -5.5  -3.17075   GCGCGGCGAACGCAA             CGCCCACG GCT CA-GGGCG             AGTCGGGGTTCAGCA  51 18
QR90_RS13830 2962526 .. 2962548 - -10.5  -2.78384   TGTCTGGTCATGACA           GGCCCGCCC GGCGT GGACGAGCC           TTCATGGAATCACCA  60 239
QR90_RS13825 2957580 .. 2957592 -  -3.3  -3.57144   GGGGTGACTTGCAAA                GCTGC GGA GCAGA                GGGGGCCACCGGGCA  51 85
QR90_RS13820 2955624 .. 2955640 -  -9.4  -3.57731   CCAAGGAGCAGAGAA              CCCCGT CTAGT ACGGGG              TTTTTTCGTTTTCAG  68 200
QR90_RS13805 2953616 .. 2953644 - -19.5   -4.4891   CCGAGGATGAGAAAA        CCGCCCTCCGCCC CAG GGGCAGCGGGCGG        CGGTAGCCAGAGCAT 100 53
QR90_RS13800 2952861 .. 2952878 - -12.7  -4.25283   ACCTGGCGAGGAAAA             GCCTCGC ATTC GCGAGGC              TGAGGATTCACCGGG  95 177
QR90_RS13790 2950749 .. 2950761 -  -4.8  -4.13014   GCGACAGCCTGAAAA                CCGT GCGGG ACGG                CGGCCGGGTGGTGAT  66 289
QR90_RS13770 2946173 .. 2946195 -  -6.3  -2.64616   TTTGGAGGGACAGCA          CCTGTCCAGC TTAC GC-GGACAAG           GGTCAGAAAGTAAAT  48 129
QR90_RS13765 2944928 .. 2944971 -  -2.9  -2.57132   CTGCTGGCGTAGAAC GTGCCGACGATGGGGGC CTTGACCGGC GCCCCCTTGGCCGCCGC TGGGGCGGGGGCGGG  39 523
        accC 2943326 .. 2943347 -   -13  -4.10552   CCCGACCAAAGGAAA           GCACCCGC CTCAGT GCGGGTGC            TTCTCTGCTGAAGCA  86 56
QR90_RS13740 NONE
QR90_RS13735 2936306 .. 2936322 -  -6.5  -2.91264   TGCCCCAGTTATACA              GGCCCAA CCC TTGCGCC              ACACTTACAAGTGAC  50 131
QR90_RS13730 2933918 .. 2933949 -    -3  -2.52742   ACGGGGCGAGAACAG      CGGGCAATTC-CG GAAGCGG CGTGAATGACCCG      GAGCCGTACCGGTTT  39 81
QR90_RS16920 2933203 .. 2933234 - -11.4  -3.30124   GGTCAGCGCGCAGAA      CGTGGCGGTGGCCC TGGG GGGCGGCGGCCACG       TCTCGGCCTCTGGAG  66 383
QR90_RS13715 2931382 .. 2931403 -  -3.6   -4.8622   CGTTCCAACGAAAAA           GCCCTCCC GGTGAG GAGAGGGT            GGCCTGGAAGCAGGT  75 52
        aceA 2929802 .. 2929824 - -10.6  -4.13282   AGGACACGCCGAAAA           GGGAAGCC CCTCTCT GGCTTCCC           CTGGCGATCACCCGC  81 47
QR90_RS13695 2926002 .. 2926024 -  -4.7  -4.38712   GCGAGGCCCAGAAAA           GCCGCGCGC TGAAG GCACACGGG           CGCTACCTGGAAAAG  69 117
        pelF NONE
QR90_RS13625 NONE
QR90_RS13620 2910663 .. 2910680 -    -4  -2.73542   GTGAACTTTGAATGA             GGCGTC GTTGTT GTCGCC              GATCAGCTGAGCATC  42 104
QR90_RS13615 2909835 .. 2909866 -  -3.7  -2.87211   ACCGGGCCGGACAGA      GAGACGGGCGAACG GCCAG CGTCCGGC-ATCTC      AGTCCGCGGCGCTCA  44 24
QR90_RS13610 NONE
QR90_RS13605 NONE
QR90_RS13600 2904377 .. 2904387 -  -2.4  -3.73953   ATCACCGTGAGCAAA                 CCCG CAC CGGC                 CCTACCTGGGGGTGA  52 27
QR90_RS13595 2903475 .. 2903509 -   -15  -2.64155   CCTGCCCGAAACGGA    CGC-CCGGCCCGCCG AGGGGA CGGCAGACCGGCGCG     AGGAGCTGGAATTGA  69 73
QR90_RS13570 2896254 .. 2896265 -    -3  -3.14132   CTGCTTCTTCATGAA                TTCA CCTC TGAA                 CAGAAATGGGTTGCT  44 215
QR90_RS13565 2893626 .. 2893645 - -12.1   -5.1861   CTGACCATCAAAAAA            CCCGCCC GATTAG GGGCGGG             CAGGTCAGCGGTAAA 100 45
       trmFO 2891099 .. 2891134 - -16.2  -3.14564   CCACGGCGGCATGAA    CGAACCCGCGCTGGACA TGC TGGCC-GCGCGGATTCG    CACGACGATCTGAAA  86 60
QR90_RS13540 2887452 .. 2887498 - -28.2  -3.16039   AAGCAGCCGCACCAA CACCAGGAGGCCCACCCCCG ACATTCG CGGGAATGGGCCTCCTGGTG CCGGTCCCAGGGGCG 100 42
QR90_RS13515 NONE
QR90_RS13510 NONE
QR90_RS13505 NONE
QR90_RS13500 NONE
QR90_RS13495 NONE
QR90_RS13490 2880269 .. 2880287 -    -3  -3.91911   GGGATTCCAAGCAAA             GCGGCG TGCGGAT CGCCGG             GGCCGGCGGCGTGAG  56 189
QR90_RS13485 2878819 .. 2878837 -    -3  -3.72695   ACGCGGCGGAGCAAA             TCCGGCCA GGT CAGACGGA             TTCTGTCTGTACCGC  54 401
QR90_RS13475 2877308 .. 2877318 -  -4.6  -3.24411   ACGCCCTGAAATACA                 CGGA CGG CCCG                 GTCGAGGTGGCCCTG  47 377
QR90_RS13460 2874832 .. 2874865 - -24.7  -4.27316   TGCGGCAAGGCAAAA     GGGGCCAGCCAAGAC GCGT GTCCTGGCTGGCCCC      GACTCGGGAGGTGTG 100 42
QR90_RS13455 2873826 .. 2873845 - -11.4  -4.88228   ACGCAAGACGAAAAA            GGAGACCC CGCA GGGCCTCC             TCTCCTTATCTCAAT 100 67
        pdhA NONE
QR90_RS13445 2871378 .. 2871405 - -11.3  -4.18197   ACCCGGCACGGAAAA        GCGGGAG-GACC GGGCT GGTCTCCCCCGC        TCAGTGCCATCCAAG  84 43
        carB 2868132 .. 2868150 -  -3.1  -3.12395   GCGAGGACCGAAAAT             TCGGTCA GCCCT TGACCCA             CTCCTGCAAACTCGT  44 11
        dinB 2867004 .. 2867015 -  -2.2  -3.40597   CCTCTGACGGAAACA                GCTC AATC GAAC                 AATCCTGGCTGGCCC  47 16
QR90_RS13420 2863515 .. 2863554 -  -9.3  -2.53449   AGATGCCCACAACAG TTGCCCCCTCTGCCGC-CG TGTA CGCGCCGC-GAGGGGGAAA  AGTTGCCGGGGAGGG  56 92
QR90_RS13415 NONE
QR90_RS13410 2861354 .. 2861377 -  -7.4   -2.8007   GGAAGGGAGGAACGA          GGCCCAGA CATGAGGT TCCGGGCC           GTTCCCTTTATTTCT  52 39
QR90_RS13400 2860317 .. 2860346 - -14.4  -3.25823   TCCGGCCCACAGGAA       GAAGGCCAGAGA ACCAAG TCTCCGGCCTTC        TTCTTTCCATCCTCA  82 42
QR90_RS13370 2854139 .. 2854170 -  -4.3  -3.14132   TCTGGCCTTCATGAA      CGC-CTGCGACCTG GCACT CACGCCGCCGGGCG      GTCAACTGCTGCGGA  45 83
QR90_RS13345 NONE
QR90_RS13340 NONE
QR90_RS13335 NONE
QR90_RS13330 2846912 .. 2846947 -  -4.8  -3.54741   GATTACGCTCTTAAA   CCA-CAC-GGCGGGCT GACTGG AACCCGCCTGTACTGG    AAACGCATCTGACCA  55 75
QR90_RS13320 2843879 .. 2843905 -  -2.3  -3.53444   CCAGCCGCCTCTAAA        GGCGC-AGT-TCC ACT GGACACCCGCACC        CCCACCGCTATCTCA  47 33
        wbaP 2842455 .. 2842469 -  -5.6  -3.96483   ATTTGATGCAAAGAA               GCGTGG CTC CCACTC               AATATGCTCCCTTGC  65 24
QR90_RS17340 NONE
QR90_RS13310 NONE
QR90_RS13305 2840128 .. 2840146 -  -2.2  -3.60296   CACCTGGAGCCTAAA             CCCGCGCG GAT CTGGCGGA             AGACCGACTGACAGC  49 2
QR90_RS13300 2838674 .. 2838694 -  -2.6  -4.82128   TCAGTAAACACAAAA            TTCTACAA GCGTT TTGTCGAA            AATGGGGTATCCTTT  74 7
QR90_RS17335 NONE
QR90_RS17805 NONE
QR90_RS17800 NONE
QR90_RS17330 NONE
QR90_RS17325 NONE
        rfbB NONE
        rfbA NONE
QR90_RS18185 NONE
QR90_RS18180 NONE
QR90_RS17795 2829095 .. 2829116 -  -5.1  -2.79505   ATATCCCATTCAAAC           CCGTCGAAC GACT GCTCAACGA            CCAGACCAGCGGACG  44 435
QR90_RS13255 2824460 .. 2824511 -  -3.6  -5.30616   GGACGGAAAGAAAAA GTTCCCGGCGAAGGAGCAGCCGCAG AGC CTACCGCTCGTCCTGC-CCGCAAAC AGCAGAAGAGACGGG  85 85
QR90_RS13250 NONE
QR90_RS13245 2823225 .. 2823263 - -15.5  -3.36878   CTCACGGACGTAGAA  CAGGTGTAGGAGGCGAGT ATTC ACT-GCCTCCCACACCTA   TTTTTGGGTTCCTGG  84 41
QR90_RS13235 NONE
QR90_RS13230 NONE
QR90_RS13225 2820469 .. 2820484 -    -6  -3.66908   GCCTGGGAAAATGAA              GCTGGG GTGA CCCGGC               AAGCCGCCCAACTGT  57 272
QR90_RS13215 2818241 .. 2818260 -    -5   -3.9712   CGACCCCACGACAAA            CTGGTG TTGATCGG CACCAG             CCACAACATCGACGA  63 77
QR90_RS13190 NONE
QR90_RS13185 2813758 .. 2813780 - -11.9  -4.93365   GGCGACAACGAAAAA           CCCGCCTGC ACGGA GCGGGCGGG           CCTTGAGCGGAGGGG 100 189
QR90_RS13180 NONE
QR90_RS13175 2811526 .. 2811538 -  -2.6  -3.60296   TACCGGGATGGGAAA                CCGC GTCCA GCAG                GGGAACCGCCAGCGC  49 66
QR90_RS13145 2805783 .. 2805798 -  -4.7  -3.05343   GGGACAGCTCGAAGA              GAGGA CGCTCT TCCTC               TGCTAGCGCAGCTCT  47 162
QR90_RS18410 NONE
QR90_RS18405 NONE
QR90_RS13125 NONE
QR90_RS13120 NONE
QR90_RS13115 2798928 .. 2798958 -    -9  -5.00196   CCCGAAACAAGAAAA       GGAGGGGAAACG GCGTTCT CGTCTCCCCTCT       TCCACGGCCCACACG 100 60
QR90_RS13105 2796822 .. 2796871 -  -3.5  -3.32844   CGGGTGAGGTGAGAA CCGTTCGCCGCAGCGAGCATCGC CAGCCC GCAA-GCT-GCGGCGTCGATCAG CCCCCAAACGTGCCC  46 22
QR90_RS13080 2791969 .. 2791989 -  -3.8   -3.7282   GGACGTGATCAAGAA            GGCGGGCG GCGAA CGCCTGGC            GCTGGGCACGAGGCC  55 428
        sufC NONE
        sufB NONE
QR90_RS17785 2787758 .. 2787795 -  -9.8  -3.36648   GAATACACCTGATAA   GGGCTACCCCACGCCA GTGCCG CAGCGTGGGAAAACCC    CTCAGTCGGCTTCGC  66 114
QR90_RS13055 NONE
        sufD 2785773 .. 2785794 -  -9.4  -5.24129   CGGTGCCAGAAAAAA           GCCAGCCC TGGTGG GGGCTGAC            TCGGGAAGCTGAGGA 100 196
QR90_RS13045 2784929 .. 2784949 -  -3.9   -2.8805   AGCACTCTGGACATA            TGGGCTC CTTACTT GTGCCCA            GCATAGAGCGGTCCA  44 145
QR90_RS13040 2783756 .. 2783791 -  -7.4  -3.59979   GCGCGGCACTGGAAA    CGCACCCTGAGCGAGGG GGG CCACCGGCC-GGGCGCG    GGGCTGGACGTGGTG  60 166
         fba 2777668 .. 2777697 - -17.1   -4.1721   ACCCACACCGCAAAA       GGCGAGGCGAGCC CACA GCCTCGCCCCGCC        CCTCAGCCCGCCGGG 100 41
QR90_RS12995 2776384 .. 2776394 -  -4.6  -3.72576   GCGCTGGCCAGGAAA                 CCGG CCG CCGA                 GCCCAGCTGATCCAG  58 463
QR90_RS17780 2773915 .. 2773939 - -12.9  -3.78141   TAAAGAAATGGGAAA          GGGAGAGGC GCAACTG GCCTCTCCC          CCTTGATCAACCTGT  81 46
QR90_RS12980 2773382 .. 2773425 - -18.2  -3.65046   CCGGGAGGTGAACAA CTGGCAGCGGCCAGCCCTCCA GAC CAGAAGG-TGGCCGCTGCCTG CCCGCAGAGCAATCA 100 38
QR90_RS12975 2772194 .. 2772204 -  -2.4  -3.27525   CGCCCGCAAAGGCAA                 CGTC TAC GGCG                 CGGTCTATGAGGTGT  45 204
QR90_RS12965 2770553 .. 2770578 -  -7.5  -5.18371   CCTCAGAAAAGAAAA         GAGGCGGACCCC GAA AGGG-CTGCCTC         AATCCTGTTGTGTCG  93 55
QR90_RS16910 2769680 .. 2769692 -  -4.7  -4.59853   GGAACTGCTGAAAAA                GCAGG TGG CCGGC                GCCGCGCCCGCCGAG  75 153
         ndk 2763128 .. 2763177 - -21.4  -4.71828   ACGGCATGAATAAAA CTTCACAGCGGCGGCGGTCCTG CAAAAC CAGAGCCGCCGCCGCTGTGCTG ACCCGCTGCGGGCCG 100 173
QR90_RS12930 2761836 .. 2761876 - -16.5  -2.90392   CAGCTCCGAAGGAGA  GAATTGCTGCATCAGAA GTCTTTT TTCTGATACAGCAATTC  GGACAAATGCTCTAG  83 74
QR90_RS12910 NONE
QR90_RS12905 2754008 .. 2754047 - -22.2  -4.25104   CCGCGCCGAGCAAAA  GAGACGGCAGGGGAACGG TCCA CCGTCCGCCTGCCGCCTC   AACTTTCAGTTGCCG 100 41
         rnr NONE
QR90_RS18390 2741982 .. 2742022 - -25.5  -3.29461   GAAGGGCCGTGAGAA  GACGCGGTGCCCAGCCTTC CTG GAGGTCTGGGCACCGCGTC  TTCGGCCATGAACTT 100 61
QR90_RS12865 2739598 .. 2739628 - -11.2  -3.85082   AAATAGACCAGCAAA       CAGCCCCTCTTC GGTGATG GAAGAGGGGCTT       TGCAGAAATGAGTCC  79 46
QR90_RS17760 2733927 .. 2733943 -  -9.3  -5.67967   ATGACGACAAAAAAA              CCGCGCC AGT GGTGCGG              GATGGAAGAGGGCCG 100 199
        mutS NONE
QR90_RS12835 NONE
QR90_RS16895 2728006 .. 2728021 -  -7.5  -2.52676   CACGGGCGGAACCTA              CGGCG TCGCCT CGCCG               GCCGGCAGCACCCAG  50 7
QR90_RS12820 2726387 .. 2726423 - -15.9   -5.1963   TGGAAGCAAGAAAAA   CG-CCCCAGACGGCCC TGAATC GGCCCGTCTGGGGACG    CAAAATTCACCTTGC 100 289
QR90_RS12815 2724494 .. 2724512 - -11.6  -3.04461   TACGCAGGTTTAACA             CTCGGCCC GTG GGGCCGCG             CAAGGTAAGCTGCGC  68 321
QR90_RS12810 NONE
QR90_RS16890 2722185 .. 2722205 - -10.4  -2.61274   TTTAGCGTAACGAAT            GGCGGCCT GCGAA AGACCGCC            CGACAACCAACAGCA  59 93
        ddrC 2721397 .. 2721419 - -12.7  -4.87626   CCGGAACATCAAAAA           GCCCCCTCC ATCGG GGAGAGGGC           TGATCTACAGCGCAG 100 48
QR90_RS12795 2720818 .. 2720849 -  -4.4  -2.62184   GGCTGGGCCAGAGGA      GTGG-CACTCGCGAT GAG ACCGTCAGTGACCAC      CCAGCGTACAAAGTG  41 96
QR90_RS16885 NONE
QR90_RS16880 NONE
QR90_RS12780 2716237 .. 2716264 - -18.4  -3.26779   TCTTGAAAACAGACA        GAGCGGCGCGCC CATG GGCGCGCCGTTC         TCGTTGCTAGACCAT  93 32
QR90_RS12755 2708742 .. 2708766 -  -5.6  -3.27475   CGGGTGACGACAACA          CGGCCCTC TTCAAGACG GCGGGCCG          CCAGGTGTTCGGTGT  52 219
QR90_RS12745 2705020 .. 2705031 -  -5.8  -3.29626   CAAGACCCAGACGAA                CAGC CCGC GCTG                 AGCCGGGTGAACCCA  52 118
QR90_RS12740 NONE
QR90_RS12735 2702956 .. 2702982 - -14.4  -3.70674   GTATTAGCCAAAACA         GCGCGCAGGGAT TCA ATCCCAACGCGC         TCACCTGTGCCCGAT  88 59
QR90_RS12705 NONE
QR90_RS12700 NONE
QR90_RS12695 2692790 .. 2692805 -  -6.1  -4.11692   GATCTATCTGGAAAA              GGCGT TCGTGG ACGCC               GGGCTGGGGCCGAAG  69 184
QR90_RS12610 2672307 .. 2672361 -    -2  -3.25823   GGTGCCGTAGACGAA GACGGTGGTGGGAG-GCGAGT-CGGA CACGC CCCGGACTGGAGCGCCCACGCCCGTC ACAGGCGCACGCCGC  45 24
QR90_RS12605 2671673 .. 2671692 -  -6.4  -3.64882   GAACAAGAAGGACAA            GCACGGCCA GCG CGGCC-TGC            AGCTGATGAACGGCC  57 214
QR90_RS12595 2671223 .. 2671261 - -12.5  -3.57561   GCTGAACGGCCCAAA  GAC-CAGCGCCGAACCCC CAAA AGAGTCCGGCGCTGCATC   TTCAAATCTGGTGCT  74 34
QR90_RS12580 NONE
QR90_RS12575 2667816 .. 2667831 -  -4.6  -2.91264   TGGGCCAGCGATAGA              CGGGCA CCAC CGCCCA               CGTAACAGTGTTGAG  46 57
QR90_RS12570 NONE
        argB 2665369 .. 2665399 -  -9.6  -2.72991   CGACAGCGCCAACGA       GCGCAGCGCCCG CATTCCC CGTGCGCTGGGC       TACACCCTGGACGCC  56 395
QR90_RS12545 NONE
QR90_RS12540 2661844 .. 2661877 - -16.1  -4.24745   GAGCAGGAAGAGAAA     GGCGGGAAAGCAG TTGAACTT CTGCTTCCCCGCC      TTTCAGCCGTACAGA 100 150
QR90_RS12530 2658374 .. 2658389 -  -3.2  -2.79183   GCTATTTTGACCACA              GCGC CTTCACCC GCGC               GTTCAAGGGGGCGGT  40 115
QR90_RS12520 NONE
QR90_RS12515 NONE
QR90_RS12510 2654984 .. 2654996 -  -4.8  -2.57132   CCCGGTGGCGAGAAT                CACC CGTTC GGTG                GAAATGAGGCGCAGT  43 317
QR90_RS12500 NONE
QR90_RS12495 2651468 .. 2651486 -  -7.4  -3.33696   GGCGGGGGGAAGCAA             TGGGGG TATGGCT CCCCCA             TTGCCCCCTCGCCCG  58 61
QR90_RS12490 2649833 .. 2649845 -  -5.5  -3.28712   TTGGCTGTGGCAGAA                CACCG ATC CAGTG                CTGGAGCGTCTATGG  49 147
QR90_RS12480 2648005 .. 2648024 -  -2.1  -2.81089   AGGGCAAATACATCA            CCGG-GGT CACCT ACCGCCAG            TTCGAGGTCTACGCG  39 190
QR90_RS12470 2645977 .. 2646006 - -12.1   -5.5074   GAAGGCAATAAAAAA       CCGCGCCTCAACA GCAA TGTCAGGGCGCGG        ACGGCAGACGGGCGC 100 180
        cysS 2644382 .. 2644401 -  -4.8  -3.53811   GTGACGGTCCTCAAA            GCCCCGGC AGAC GCCGCGCC             GCGCCTCTAAGGCAC  55 89
QR90_RS12455 2642589 .. 2642628 - -22.9  -3.61103   GAAGGGCAGCCGAAA  GCGCCGCCCTCTTCCCG GTTCAT CAGGAGGAGGGCGGCGC   CGTTCACGGCTGGGC 100 44
QR90_RS12445 NONE
QR90_RS12440 2639840 .. 2639855 -  -3.9  -3.85698   GCGGCGCCGCAGAAA              CAGGC CCTTTT GCCCG               TCCTGTGAGGCGCCC  58 85
        coxB NONE
QR90_RS12430 2635758 .. 2635797 - -18.1  -4.25104   GGTGGGGGACGAAAA GAGGGGGGCGGGAAA-GCA TTTC TGCCTTTCCCGCCC-CCTC  AGCTTCAGTCTTCTT 100 49
QR90_RS12425 2635008 .. 2635024 -  -4.3  -3.03124   CTGCAGGGTTCAAGA              CCCGCCA TAC TTGCGGA              TCAGTCCCGGCAAAT  45 3
        rnpB 2634460 .. 2634488 - -14.6   -3.5332   AAACCGGCAAAGGAA        GCCGCCCCTTCA GCAGG CGAAGAGGCGGC        GGGTGGTGCGGGGGA  83 29
QR90_RS18385 2633973 .. 2633990 -  -6.9  -3.53012   GCCGGGCGCTGGAAA             CCCTGCC GCTG GGCACGG              TCTACGCGGTGTGGA  55 335
QR90_RS12410 2632858 .. 2632868 -  -3.2  -3.54424   GCCCACGCGCTGAAA                 GCCA GGC TGAC                 GCCGGAATTGCTGAC  51 276
        mraZ NONE
        rsmH NONE
QR90_RS12390 NONE
QR90_RS12385 2628931 .. 2628941 -  -2.4  -4.61527   AAAACGGCCTAAAAA                 CCCC GTG GGGT                 AAATTGCCCAAAGAA  68 274
QR90_RS18025 2628020 .. 2628041 - -12.3  -5.26875   CCGGCAACCAAAAAA           GAGTCGCCC AGAT GGACGACTC            GGGTGGGTTCCGCCT 100 63
QR90_RS12375 2626718 .. 2626730 -  -4.7  -3.53091   AGGTGCGGGGGTAAA                GGCTG TTC CGGCC                TGCGGCCCCGCCCCC  53 43
        acnA 2622975 .. 2623005 - -11.2  -4.60073   TAGAGAATTAGAAAA       GGTCAGACGCCA ACCGTTA CGGCATCTGACC       TTTCCCTCTTACGTG  95 42
        mqnB 2617578 .. 2617609 -  -3.6  -3.16881   CAGCCACTGGATCAA      CATCGATCCC-GCCA CGC CGGCCGGGACCACCG      TGAACGTGAAGGTCA  45 106
         tdh 2615650 .. 2615678 - -21.7  -5.80951   AGGGAAAACAAAAAA        GCCGCGCCGGGAG GTT CTCCGGGCGCGGC        CTGTGGGTTACACGG 100 202
        trpS 2614561 .. 2614575 -  -4.2  -3.55444   CGTGGAGTTGGCAAA               CCGG TGCCCTC CCGG               TTTGTCAACGAAACA  53 54
QR90_RS12305 2613437 .. 2613449 -  -6.2  -2.90392   TAGGGGTCAAGCATA                GCGG TGGGG CCGC                CGGGCGAAGGTAGTG  48 58
QR90_RS12300 2612469 .. 2612481 -  -4.7  -3.05935   AGATCGGTCATGGAA                GCTCC TGG GGTGC                GCCTGCGGCGCGTCT  47 100
        pdxH 2611809 .. 2611819 -  -8.2  -2.62983   TTGACCTTTAGACCA                 CGCC GAA GGCG                 TCACGGCATCAGGCG  53 26
QR90_RS12285 2608106 .. 2608127 -  -2.1  -3.56821   ATCAGAGTGTGGAAA           CACACCCGG AGGC CCGGTCACG            CGGGCTGGCCGGCAC  50 401
        lepA 2603020 .. 2603040 -  -6.7  -3.97947   TGTAGGCAGCACAAA            CGCCAGCAC CTG GGCCTGGCG            TCTGGGGGTTGAGCC  67 59
QR90_RS12250 NONE
QR90_RS12245 2599165 .. 2599195 -  -6.1  -2.81642   AGATCAGCCACCACA      CCGCCCGGAAGCGC GAAG ACG-TTGCAGGCGG       CGTCAAACCCAGTCC  46 28
QR90_RS12240 NONE
QR90_RS12235 2597688 .. 2597704 - -10.1  -2.85896   GTCATGAACGAATGA              CGGGCTG ATC CAACCCG              AGGTTCCCCGCGAAC  61 45
QR90_RS12230 2594558 .. 2594573 - -11.8  -5.06116   AAAACAACAAGAAAA              GCGGCC CGGA GGCCGC               CTTGATTTCTTAAAC 100 244
QR90_RS16870 2592537 .. 2592560 -    -3  -3.20901   ACGTTACGAACGGAA          GCCGTCTCAGA CCC TCAGCG-CGGC          AGCGTGAAGCCGAAC  44 16
QR90_RS12195 NONE
QR90_RS12190 NONE
QR90_RS12185 2585109 .. 2585137 - -17.5  -3.04792   TCACCACCTTCAAGA        CCGGCAGGCCA TTCAATG TGGCCTGCCGG        TCTTCTGTGTTCAGG  88 46
QR90_RS12175 2584018 .. 2584064 -  -6.3  -3.06831   TCAAGGCGCAGTCAA GGCACGGCGGTGCAGGCGGCGG GTTA CTGCT-CCTGCGCCGCCTCGTC TTCCAGCGCCCGCTC  51 2
QR90_RS12170 2583810 .. 2583827 -  -8.4  -5.07652   CGGGCCAAAAGAAAA             CCTCCC GCAGCG GGGAGG              TTCATTCCTGCGTGG  93 38
QR90_RS12165 2582689 .. 2582710 -  -4.3  -3.09492   GGTGGAACTGGAAGA           CCTGCTGTG CTTC CACGGCAGC            CCCGCGAGGGACGAC  43 381
QR90_RS12155 2581062 .. 2581072 -  -2.4  -3.71848   GGGCCTGAGCAACAA                 GCGC GCC GCCC                 GTGACCTGGGCGTTT  53 174
QR90_RS12140 2578528 .. 2578538 -  -8.2  -3.78775   CCGGCGACGAGGAAA                 GCGC GGT GCGC                 TGGGGCGCGGACGAA  67 465
QR90_RS12125 2576276 .. 2576289 -  -4.5  -3.46602   GGGCCTACATGAGAA               GC-GGC ACC GCCAGC               GGATTTGGCGCGGGC  52 226
         map NONE
QR90_RS12105 2573283 .. 2573325 -  -9.8  -3.21912   GCTGGAACTGATCAA CGCC--GGCGTGGCGGGGGC ACTGG GCCAGCACCACGCCTCGGCG GACCGGCTGCTGACG  60 100
QR90_RS12095 2572372 .. 2572404 - -10.5   -3.4072   CAGGTTTTATGAGAA     CGGAGCGG-GGCCG GATTCA CGTCCGCCGCCCCG      CTGCGGGGTCTGAGG  68 46
QR90_RS12090 2571488 .. 2571514 - -12.9  -3.48924   GCACCCCCCATAGAA         CGGGCGGCCCC ATATG GAGGCCGCCTG         TTTCGTTTTGAATCG  76 60
QR90_RS12075 2570409 .. 2570441 -  -5.3  -2.71712   CGGGGGCGCGCAAAG      GTGGTGCCCGGCAGC CCG GCTACCGGGTCTCGC      GCAGCAGGGCCGGCA  44 12
QR90_RS12070 2568842 .. 2568856 -  -2.7  -2.90496   TTCGTTGGCAAACCA               GCGCC TTCCC GGCCC               ACCAATGAGTCAATC  40 51
QR90_RS12065 2567843 .. 2567871 -  -8.8  -4.37092   ATGGTGGGGAGAAAA       GC-TGCCGCCCCA GTGC TGAGGCGGCCTGC        TGTTCCGGCGAAGTT  79 40
QR90_RS12060 NONE
QR90_RS12055 NONE
        lepB 2566267 .. 2566303 -    -5  -3.05294   GGAAAGTGCCCAATA    CAGTCTCATTCCCGAC AAACG GCCGGGGAGAAGGCTG    GGACTCGACGATCTG  47 139
QR90_RS12045 2565125 .. 2565154 -  -9.1  -4.81083   GTGAACCATGAAAAA       GCCCCGCACCGGC ACAG ACCGGGACGGGGT        TGAACTGGGGCGGCT  93 45
QR90_RS12040 2564536 .. 2564551 -  -2.5  -4.77165   CGGGTCATAAGAAAA              GC-GGC GCCAG GCCAGC              AGTCTGACTGTAACA  72 98
QR90_RS12035 NONE
QR90_RS12030 2561826 .. 2561860 -    -2  -3.62046   GCACGCCCCGAAGAA     GGGCTGACCCGTTC TTTAGGC AAGGGGGTCAGGCC     GCGCTCAGCGCACCA  49 30
QR90_RS12025 2560808 .. 2560841 -  -9.6  -5.95166   CTGAATCAAAAAAAA     GAGCGGGCGCGAG ACTTCAATG CTCGCGCCCAC-C     TGCGGTCCCTGCCTC 100 41
QR90_RS12020 2559934 .. 2559953 -  -2.8   -4.4891   TGCAGCATCAGAAAA            GGAGAC TTCTGATT GCCTCC             ATTCTCTCCTTCGGA  67 138
QR90_RS12010 2558110 .. 2558139 -  -9.3  -2.83164   GGATTGACCACCAGA       TGGCGCGCG GCCTGATCCCCA CGCGCGCCA        GAGTTTTAGGCGAAG  53 101
QR90_RS11995 2554385 .. 2554399 -  -5.7  -2.88999   GGCGGATAGATGAGA               CAGGT GAGCA ACCTG               GCTTATGGTTTTCCT  48 28
QR90_RS11985 2552697 .. 2552709 -  -4.7  -3.28712   CTCCCGGCGCCAGAA                GGGGC CGG GCCAC                CTCCCGCACACCGGC  50 214
QR90_RS16860 NONE
QR90_RS11965 2547473 .. 2547498 - -20.5  -3.96148   CTGGCCCACCAGAAA         CCGTCCCCGCT TCGA AGCGGGGACGG          CCTGTTCTTGTTCTG 100 69
QR90_RS11950 NONE
        purM NONE
QR90_RS11940 NONE
        meaB 2541244 .. 2541254 -  -4.6  -3.63694   ACCGACGCTCAAGAA                 CCGC CGA GCAG                 TTCGTCCGCCGCCGC  55 8
QR90_RS11930 2540337 .. 2540351 -  -3.4  -3.73775   CCCAGCCGGACGAAA               CGGCGG ACC CCACGG               TGGCTCGTGATCACT  55 373
QR90_RS11920 2538728 .. 2538756 - -18.9  -3.27489   CGAACGGCAAACAGA        GTGCCCCCTCCCA CGG CAGGAGGGGGCAC        TTCACCCAGCCTCAG  93 37
QR90_RS11905 NONE
QR90_RS11900 2533763 .. 2533787 -  -7.9  -3.44051   CGTGGACGAGGAGAA          GACCACGCT CGTGGGC AACGTGGTC          CTGAACAGCGAGGGC  58 369
QR90_RS11880 2530323 .. 2530353 - -13.4  -3.41602   GCGAGGTCAGCACAA       CGCCTGAAAACC AGTAAAA GGCTTTCAGGCG       CGTGGAGTTCGCGTG  79 200
        thrS 2528270 .. 2528300 - -12.5  -4.24002   CTCTAAACGGCAAAA      GGGCCGCCC-CCGG TTCC CCGGCAGGCGGCCT       CTCCCCCTTTGCGGC  89 40
        folE 2526274 .. 2526329 - -18.5  -3.79519   AACGGCAGGACTAAA GCAAGACACAGGAGGGG-GGCCATGAC AACC GACATGGCCTCCCCTCCTGTGT-TCGT CTTGCGTGTCAGCGC 100 34
QR90_RS11855 2523688 .. 2523712 -    -2  -4.08767   GGGAGGCCGGGAAAA          GGACTCAGGC TGTTT GCCTCTATCC          CATTGCTTCCCTCCC  57 47
QR90_RS11845 2520888 .. 2520901 -  -3.1  -3.28712   TTTCCGGCGCGAGAA               GGATA GTAT CATCC                GCCTTCAAAACCTGC  46 78
QR90_RS11840 2520709 .. 2520725 - -10.1   -5.9218   CACACAACAAAAAAA              CCCCGTC ACC GACGAGG              TTTTCTTCATTTGGC 100 37
QR90_RS11830 2518849 .. 2518877 - -11.7  -3.32521   ACCACATTCCGAGAA        GGCCAGAGGCG CAGTTGT CGCTTCTGGCC        TCTTTTCTGGACTCT  72 322
QR90_RS16855 2516293 .. 2516310 -  -8.3  -3.68738   TCTTTAAGAAATCAA             GGCGGCC TTCG GGCCGCT              TTTTCCATGGCTGGC  69 139
QR90_RS11820 2514401 .. 2514414 -  -3.7  -3.76065   GGAATAAGAAATCAA               GGCCG CCTT CGGGC                TGCTTTCTACTTGTC  56 118
QR90_RS11795 NONE
QR90_RS11790 2507579 .. 2507618 -  -4.3  -2.50113   CAGCAGGCCAGCAAC  TCCGAGACCGCGCT TCATTTGGTCCCC AGCGCGG-CGCGGA  TGGCATCCCGCAACT  41 0
QR90_RS11785 2506630 .. 2506642 -  -3.3  -3.54424   CTGGAGCGGGCCAAA                CTGCG TGA CCCAG                TGATCCTGCGGGCCA  51 236
QR90_RS11770 2504625 .. 2504642 -  -3.3  -3.53091   AGTGGCTGGTGGAAA             CGCTGGGC TCG GCCCTG-G             TGGGCGTGGTGTTGG  49 139
QR90_RS11760 NONE
QR90_RS11755 NONE
QR90_RS11750 2501433 .. 2501459 -  -4.3  -3.15544   GGTGACGCCGATCAA         CGGGCCGCTCA CCCCT TGAGCATCCCT         TTCAGAATGAACATC  47 7
QR90_RS11745 NONE
        pruA 2498956 .. 2498978 - -13.4  -4.64766   GCCAGAGCGGAAAAA           GCCCCCTCTA GAA TGGAGGGGGC           CAGATGAACGTTGCG 100 43
QR90_RS11710 NONE
      gluQRS 2492883 .. 2492901 - -10.4  -3.53012   GGCGTGGGCGGGAAA             CTTAGACA ACC TGTCTAAG             TTTGTGACAAAGATT  68 21
        trpB 2491574 .. 2491587 -  -5.2  -3.08679   CCCCTGGACTGAACA               GCGG TCATGC CCGC                ACCTCCTGACGCTCG  47 16
        trpA 2490726 .. 2490764 -    -3  -4.62069   CGCCCACTGTAAAAA  GCCGAGCCGTGCAGCGT TCTTAC ACGCCGCCCCG-TAGGC   AGCGGCGGCTCAGGC  69 42
QR90_RS11690 NONE
QR90_RS11685 2487332 .. 2487346 -  -4.2  -3.01905   ACGCGTCATACAAAT               GGCTCA GGG TGAGGC               GGGATGGTCCGTCTG  45 14
QR90_RS11680 NONE
QR90_RS11675 2486408 .. 2486433 - -10.3  -3.05963   AGGCTGAGGCTAACA         CGCCGCCCAGC GCTG GCAAAGCGGCG          CTGTCAGGCGCTCCA  62 106
QR90_RS11670 2484534 .. 2484545 -  -7.2   -4.1822   GGTCAGGGCAACAAA                GGCC CTCA GGCC                 AAGAACGTGGTCGTG  73 276
QR90_RS11660 2483417 .. 2483429 -  -4.8  -2.57132   TGGGGCGGGTACAAG                GGCA GGCCT TGCC                GGTTTAATCGTCTCA  43 38
QR90_RS11655 2482156 .. 2482180 - -11.5  -4.18197   ACCGGGCAGGCAAAA          GGGCGAGAA CGTGGTC TTCTCGCCC          TTCTTGTCTGCCTTT  84 47
QR90_RS11630 NONE
QR90_RS11625 2474107 .. 2474162 - -24.4  -2.63073   GGCCTGGAATAAGAC CTGG-AAGTGAAGGGGCCTGTCAGA TATTCAG TCTGACAGGCCCCTTCACTTGCCAC TCAGTACAGCGCTCC 100 26
QR90_RS11595 2468096 .. 2468106 -  -4.6  -3.92542   TCGATGTGGAAAGAA                 GGCA CGC CGCC                 TCCCACCGGGCAGAG  60 194
         icd 2461846 .. 2461884 - -24.7  -4.07562   TAAAGGGGACAGAAA   CGGCGGCGCTCAGGG TTGATCTGC CCCTGAGCGCCGCCG   TTTGTCGTTCGGTCT 100 176
QR90_RS11550 2459514 .. 2459557 -  -2.5  -2.96274   CGGCCCACAACGAGA CGTGAGGGTGGAGCCGCTCCGC TGC GCGAAGCCGCTCCA-C-TAA-G ATTTTGATTTGAACG  40 21
QR90_RS17305 2458861 .. 2458906 -  -8.8  -2.70932   TTCGCGCGGCAAGGA TGCG-GGGGCGGCCTGCGGGC AGCTG GCCCTCAAGCGGCCCGGCGCG GTGAGCGGGACCGGC  52 109
QR90_RS11520 2453329 .. 2453352 -  -2.3  -4.13767   TTTCCGACGCGAAAA          CGGCCCCAC AGCTTG GCGAGACCA           TGATCCGTCGCAGGT  59 137
QR90_RS11515 2451875 .. 2451911 - -22.4  -4.18018   CGCGGGCATCGAAAA    GGGCGGAACGCAGGGA CTGAT TCCCCACGTTCCGCCC    GCCTTCTGCCGGTTA 100 38
QR90_RS11490 2448566 .. 2448579 -  -3.7  -2.80443   GCAGAGTGTAGGACA               GCAGG ACCT CCGGC                TGTCAAACGGGCGGA  42 48
QR90_RS11485 2447911 .. 2447948 -  -7.5  -2.64616   CGCTCAGGCAGATGA   GGACGCGCGGCGGCGGAC GCG GTCAGCC-CAGCGCGGCG   ACGCGGGCCTCCAGC  51 10
QR90_RS11480 NONE
        mraY 2446313 .. 2446327 -  -5.6  -2.57132   GGGCGGGCCGAGAAG               CGGTCA CTA TGGCCG               GCCCCCCAGAATCCA  46 17
QR90_RS11470 2444865 .. 2444878 -  -2.3  -3.75115   GCTTTACAAAACGAA               GTGAG GCGG CGCAC                AAGTGGGCCTGGATG  52 491
QR90_RS11460 2444122 .. 2444160 - -21.1   -3.4252   CCCGAGCCACCAGAA   TGAGAGGAGCGCCGGAC GCAAT GCCCGGCGCTCTTCTCA   TGTAGACGGGGGGTG 100 43
QR90_RS11445 NONE
QR90_RS11440 NONE
QR90_RS11435 2438438 .. 2438476 - -12.5  -3.93664   AGGCAAGAGAGGAAA  CGGAGAGTGGGACG-CTA CCTT TCGACGTCCCACTCTCCT   TTTACCGATGGGCGA  83 309
QR90_RS11425 2436349 .. 2436361 -  -6.9  -3.18912   TCAGTCACGGACCAA                CGGCC CCG GGCCA                CACCGGACCGCAGGG  53 202
QR90_RS11420 NONE
QR90_RS11415 2432411 .. 2432436 - -10.4  -4.93316   CAAGAACACGAAAAA         CCCCGCCGCGC GGTGG GCG-GGCGGAG         CCTACAGAGCGCTTG 100 53
QR90_RS11405 2431332 .. 2431371 -  -7.7   -4.0896   AAACGCCGGGGAAAA  CGGGCCGGGCGGTCAGGG GCGTG CTCCGAACG-CCGCCCCG  AACTTGGGGAATCAA  70 37
        accD NONE
QR90_RS11395 2429402 .. 2429421 -  -9.3  -4.30995   CCGCCCATAAAAGAA            CCCTCTC TGTGAC GAGAGGG             TCAGGGGCGGGGGTC  83 46
QR90_RS11385 NONE
QR90_RS11380 2427043 .. 2427053 -  -6.8  -4.32034   CGACGATCAGGAAAA                 CGAG CTG CTCG                 ACGACTACGGCGAGG  72 290
QR90_RS11365 2423698 .. 2423708 -  -2.4  -3.64703   CTTCGGTCAGGCAAA                 GGCC AGC GGCA                 ACTCCACCCGCACCC  49 6
QR90_RS11360 2422574 .. 2422621 - -11.9  -4.42238   TGACCTGAAGGAAAA TGAAGAGGGGGCAGCGCAGTC GTTGAT GACTGCGCCGCCCTCCGCTCG TTATTTCAGCCTGAG 100 26
QR90_RS11340 2419214 .. 2419243 - -17.9  -3.60805   ACAGTCCAGCCCAAA       CCGGAGAGGCAGA TGGC TCCGCCTCCCCGG        TTCAGGTCAATACAC 100 78
QR90_RS11330 NONE
QR90_RS11325 NONE
QR90_RS11320 2416351 .. 2416361 -  -5.4  -3.53224   CATCGTTTTCGCAAA                 CGAT TCA ATCG                 GAGTCGGGATTATTT  53 35
QR90_RS11315 2414600 .. 2414612 -  -6.2   -4.2828   CGGTATGCAGGAAAA                GGCC AGGCA GGCC                GAGAACCTGCCGGAG  72 510
QR90_RS11300 2413724 .. 2413738 -  -2.8  -3.85698   TGTTTCGTGTAGAAA               TCGG GACAGCT CCGA               TTTCTACACTCCACG  56 190
QR90_RS11290 2410417 .. 2410437 -  -2.3  -3.77666   CACAGCCAAGTCAAA            CTGGGCGGC GTC GTGGCCCTG            AGCGGTGCGTTGATC  53 452
QR90_RS11260 NONE
QR90_RS11255 2403127 .. 2403138 -  -7.2  -2.59447   CCTGAAGGACAAGAC                CGCC TTCT GGCG                 CGGCGTGATCCGGGA  48 186
QR90_RS11245 2401101 .. 2401149 -  -4.4  -3.02829   TACACCTGCTGAAGA CCGGCGAGCTAGACCGCCACATTC GCC GCACGCGCC-G-CTGGCACGCCGG GGTGCGCGACGCCCT  43 321
QR90_RS11235 NONE
QR90_RS11230 NONE
QR90_RS11225 2397029 .. 2397063 - -18.7  -4.70659   GTGGACATGCAAAAA    GGCTGGAGGCC-CGTC CGCA GACGTGACCTCCAGCC     CCCAGCAGTGGGGGA 100 41
QR90_RS11220 2395162 .. 2395202 -    -9  -2.79133   TAACGCCGGATGAGA  TGCAGACGTGGGTCAGAG GCTGT CTCTGACCCACGTTTATT  GGGCGTGTTTTGCAG  57 48
QR90_RS11210 NONE
QR90_RS11205 NONE
QR90_RS11200 2391129 .. 2391166 -  -4.7  -3.05384   CCCCCTTCCAGCGAA   CGCGAACTGTACCGC-CG GGG CGTGCCGCCCAGCTGGCG   TGGCGCCCGCCTCAA  46 291
        sodA 2388792 .. 2388821 - -17.1  -4.82901   CGGTTGGCAGAAAAA       TGCCCCCCGGCCA CACT CGGCCGGGGGGTA        CTTCTGGCTCGCGGG 100 42
QR90_RS11165 NONE
QR90_RS11160 2381879 .. 2381894 -  -3.2  -3.57144   TGCGGGAGGCGGAAA              GTGGAC GGTG ACCCAC               GAGAAGGGACGTGGC  51 86
QR90_RS11155 2380911 .. 2380934 -  -7.4   -2.6155   CTGGCCAACATCAAT          GTGCAGTCTGG CGG CCAGAC-GCTC          GCCACGCTGAGCATC  48 151
QR90_RS11145 NONE
QR90_RS11140 2379088 .. 2379139 -  -9.3  -3.14564   CGAGCGGGCCACGAA GCGCCGGGCGGTGGGGCAGGCCAGCG TCA CGCCGGC--ACCCC-CAGCGCGGCGT GGATGTCGGCTTTCA  61 0
        hemA NONE
QR90_RS11130 NONE
QR90_RS11125 2376426 .. 2376436 -  -2.4  -3.99353   GAGACAGCAACCAAA                 GGCC GTC GGGC                 GCGAAGCGGACGGGC  57 200
QR90_RS11120 2374511 .. 2374546 -    -9  -3.15544   GCGGAGCGCCAGCAA    CAGACCGAGCGCTGG ATCCAGG CC-GCGCTGGGCCTG    GTGGGCGATTTCGGC  56 388
QR90_RS11100 2369987 .. 2370001 -  -5.6  -3.91084   TCACCCTCAACGAAA               CAGCCC CGA AGGCCG               TCGGGCGCGCAGCGC  62 222
QR90_RS11080 NONE
QR90_RS11075 NONE
QR90_RS11070 2363584 .. 2363597 -  -3.8  -2.57931   GCCAGTGGGCAGAAG               GGGT AGGTTG ACCC                GCTACACCCGCGCTG  41 27
QR90_RS11065 NONE
QR90_RS11060 2360334 .. 2360360 - -10.8  -4.27316   CGTCTGAACCGAAAA         GCCCCTCACCGA CTA TGGTTGAGGGGC         TTTTCCCCGGCTGGA  89 49
QR90_RS11045 2356918 .. 2356930 -  -9.1  -3.99592   AGCGAGCAGGAGAAA                GACGG GTT CCGTC                TGTTTCGTTTACAAA  76 84
QR90_RS11035 2355481 .. 2355513 - -20.7  -3.03012   ACTATTGACAAACGA      GAAGCACCCGGACGA GCG TTGTCCGGGTGCTTC      TTTCGCCCAGCGACT  93 39
QR90_RS11015 2352515 .. 2352529 -  -2.8  -3.87869   GTAACGCGGCAGAAA               TCGG GACGGCT CCGA               TGTCCACACTCCACG  56 114
QR90_RS10985 NONE
QR90_RS10980 2347259 .. 2347271 -  -2.6  -3.01712   CCGCCGCCGCGAACA                CCCG GTCAT CGAG                GTCTGGACCGACGAG  41 313
QR90_RS10965 2344288 .. 2344301 -  -9.5  -3.91911   GGCAGTCTAATGAAA               GCGCC AGCG GGCGC                TCCGGTGGTCGGCCC  74 102
QR90_RS10960 2343544 .. 2343572 -    -8  -2.52464   TGCGGTTGGAAGTCA        CCGCGCCGCGCA TTCCC TGCGCCACGCTG        GCGGCCCATGTCGGC  48 303
QR90_RS10950 2341507 .. 2341520 -  -3.7  -3.28712   CTTCGGCTGCCAGAA               CCTGC CGGG GCGGG                GCCAGGGGCGGCGCT  48 41
QR90_RS10940 2340363 .. 2340378 -  -2.5  -3.48593   CAGGGTGCCAGAGAA              CAGGG ACATGG CCCTA               GACCCCGAAGAACTC  47 23
QR90_RS10935 2339907 .. 2339960 -  -2.2  -3.21924   CGATGCGCGAGAACA GCGTG-TCGCC-CTGCGCGCCGAGCAG CAG CGGGCCGGAG-GCCGAGGCGGTCACGC GGCCCCCACGGCGGC  43 20
QR90_RS16835 NONE
QR90_RS10925 2339097 .. 2339144 -  -9.7  -2.60496   CGCGCCCTGAAAGAT GGGCGCGTGGC-GAAG-CAGCGC AAGG GCGCGGTCAGCAGTCACGCGCCC TATGGTGCCACGCCT  56 61
QR90_RS10920 2338419 .. 2338463 -   -20  -4.20368   TCAGGGCAACAGAAA CAGGAGGCGGGGCCTTGAGG AAGAA CCTCAGCGCCCCGCCTCCTC CTGTTGGCCGCCGGC 100 8
QR90_RS10910 2336524 .. 2336547 -  -4.6  -2.53876   CTGGAGCTGAACCGA          TTCCAACCGT GACA ACAGCTGAAA           TCGTGGCCTAAAGTT  43 99
QR90_RS10905 NONE
QR90_RS10900 2333620 .. 2333644 - -15.7  -4.77036   GCGCACCATCAAAAA          GGCCCCCTCCA GCA CGGAGAGGGCC          TTCGGTCAGGACCGG 100 45
QR90_RS10885 2329339 .. 2329371 -   -17  -3.64755   ATAGAGGCGCAAGAA      GGAGGCCCGGACGC ATCAA GCATCCGGGCCTCG      CCCACTTCAACTTCA 100 53
QR90_RS10880 2328567 .. 2328596 - -10.7  -3.96387   AGGAAGCCAACGAAA       GCTCCCCGCCT GTGCAATG AGGCGGGGAGG        CAAAACCTGAGCCGG  79 43
QR90_RS10870 2326642 .. 2326682 - -12.4  -3.29144   GGACCTGCGCTACAA  CGGTGGCGGCAGCCTGAC CGAAT GCGTGGCCGCCGCCAGCG  TCTTTGCCCCGGTGG  70 498
QR90_RS17720 2323460 .. 2323490 -   -11  -3.39668   CCGCAAACGGTAGAA       GGGGGCCGCTCCCA CAC TCGGAGCTGCCCTC       TTGCATTGACAGAGC  71 101
QR90_RS17715 NONE
QR90_RS10850 NONE
QR90_RS10845 2320916 .. 2320931 -  -3.2  -3.12327   CCGTGAGATTGAACA              TCTGTC AAGG GTCAGA               TCGGCTTTCTACGAA  44 144
QR90_RS10795 NONE
QR90_RS10790 2307696 .. 2307710 -  -9.2  -2.78596   CATGCGGTCAGCATA               GCCGCC CAC GGCAGC               GGTACCGGCACAGGC  57 48
QR90_RS10785 NONE
QR90_RS10780 2306221 .. 2306240 -  -3.4  -2.89564   GCTGCACCGTATAGA            GCGAGGCC GGCA GGCCTGTC             TGACCGCCGGCCAAA  42 83
QR90_RS10775 NONE
QR90_RS10770 2304449 .. 2304476 - -13.4  -2.56177   ACAGCCCAGATGAAT        CTGGCCTAGGCC GTCG GGTCCAGGCCAG         TTCAAGCGGCTGTCA  71 310
QR90_RS16830 NONE
QR90_RS10750 2299037 .. 2299066 - -16.4  -4.68384   ATGGACTGAAGAAAA       GCCCCCGACTCC GCTGAG GGGGTCGGGGGC        GCAACGGCTCAGGCG 100 164
        aspS 2297366 .. 2297376 -  -4.6  -3.19192   CGTGATGGAAGTCAA                 CGGC GAC ACCG                 TGAAGGTGGACTTCA  47 295
QR90_RS10720 2291332 .. 2291355 - -11.7  -3.83026   TGGCGCCAGAGTAAA          GAGGGAGCC GGATGT GGCCCCCTC           CCGCGCGCTGAACGT  81 216
QR90_RS10710 NONE
QR90_RS10705 2288370 .. 2288392 - -19.2  -4.19258   AGATTCCACTCAAAA           GCCCCTCCAG AAT CTGGAGGGGC           TTTTTTTTGTTGCTT 100 67
QR90_RS10685 NONE
QR90_RS10680 NONE
        glmM 2283045 .. 2283060 -  -8.2  -3.82097   GGGAAACTGATGAAA              CCCGGC AGGA ACCGGG               GGGTTACTGTGCGGG  69 29
QR90_RS10670 2282417 .. 2282443 - -14.5  -3.68836   ACCGGCAAAAGAATA        GGAGGCGAGTCC CGGC GG-CTCGCCTCC         CCCACTGCGCCCGCC  88 45
QR90_RS10645 NONE
QR90_RS10640 2274765 .. 2274796 -  -5.1  -2.67803   CGCCCACGAAATTCA     CGGGCCGCGTGCCGA TGAT CCGG--CGCAGCCCA      CCGACGTAATCAATT  43 58
QR90_RS17285 2274380 .. 2274396 -  -4.4  -2.54896   CTCGGACGTAATTCA             CGCCAGC CACT GCTG-CG              CTTTGCGGCCCAGCC  41 6
QR90_RS10630 2273750 .. 2273764 -  -2.1  -3.50393   CTTCACCTTACAGAA               CCCTT TCGTG AAGAG               TGATCCGCAAGACGC  47 192
QR90_RS16825 2272214 .. 2272227 -  -5.9  -3.25823   TGTGGCGGAGATGAA               CGGCA TGCC CGCCG                CCACCGCCGCCCTAA  52 271
        cobA NONE
        rpmF 2269780 .. 2269796 -  -9.4  -5.37593   GGTGAAATGAAAAAA              GCTCCC ACGCG GGGAGC              CTCTTCTCAAACAGG 100 47
QR90_RS10605 2268257 .. 2268276 -  -9.2  -3.61398   GGCGGTGCTGAACAA            CGTGCGCC ACCA GGTGCACG             CCCTGCGTCGGGAGT  63 233
QR90_RS10595 2267176 .. 2267193 -  -6.9  -3.02263   ATAGGCCGGCCAACA             CCCGGCT GCAA AGCAGGG              CACAGATGAAGGATC  51 76
QR90_RS10590 2265661 .. 2265672 -  -4.4  -3.46106   CCAAAACGTGAAATA                TGAG TTCA CTCA                 GACCTGCGGGACTGT  51 78
QR90_RS17280 2264341 .. 2264361 - -11.8  -5.10933   GCAGGCAAAAGAAAA            CGCCCCCC GCAAT GGGGGACG            CCTGTTTCAATTCAG 100 62
QR90_RS10575 2260691 .. 2260707 -  -2.1  -3.06796   GGCCACGTCAGGGAA              GCTGAGC ATG GCTCCGG              TTGCCCGCGCTGTCC  41 1
QR90_RS10570 2258985 .. 2258995 -  -4.6  -3.30124   TGGCACCCTGCACAA                 CGGC CTG ACCG                 GCGTGCTGCCGGGGT  49 230
QR90_RS10540 2253361 .. 2253388 -  -5.4  -3.14132   GCCCTGCTGCAGCAA        CTCGCCCTGCTG GCCG CTGCTGAGCGAA         CCGCTGAGGCGCTGG  48 437
QR90_RS10530 2252458 .. 2252469 -  -4.4  -2.71924   GATGCCCCCCGAAAC                TCTG GGTT CAGA                 CCGCACGCGCCTCAC  42 21
QR90_RS10525 2251120 .. 2251167 - -18.6  -3.00525   CGCTCTGAAAGCAGA GAGTGATCCCCCTTCCATGCG TTTAAGC CGC-TGGAAGGGGGACCGCTC TTTTACGCATGTTCG  91 56
QR90_RS10515 2248965 .. 2248981 -  -5.7  -3.54741   CAGGAGTGGCGTAAA              CGCCGTC CTG GCCGGCA              GATTCTCGTTTAGAT  57 73
        paaG 2247854 .. 2247868 -    -7  -3.57674   ACTGGAGGAGAAAGA               GGGCGC CAA GCTCCC               CTTCCGGGTTGGTTC  59 41
QR90_RS10505 NONE
        paaC NONE
        paaJ 2245795 .. 2245836 - -21.8  -3.17075   GCGGGCCGAACTGAA CATCAAGACCCCCGACTC TGGGTT GAGTCGGGGGTCTTGATT  CAGCGCCCTAGACGC 100 33
QR90_RS10485 NONE
QR90_RS10475 NONE
QR90_RS10470 2240806 .. 2240854 - -11.1  -3.34398   GTTCCTCCTGAAAGA GCGGCGGGG-GCGCCTGGAAAAC GCGCG GTTCTCCAC-CACGCCCCACCGC CGGTTGACCTTATTT  69 35
QR90_RS10465 NONE
QR90_RS10460 NONE
QR90_RS10455 NONE
QR90_RS10450 NONE
QR90_RS10445 2235950 .. 2235983 - -16.7  -4.36914   CGCTGGCCCACAAAA     TAGGGTGGAGAGGCG AGTG CGCCCCTCCACCCCG      TTCAGCTTTTTTCAG 100 37
        ispG NONE
QR90_RS10430 NONE
QR90_RS17275 2232725 .. 2232735 -  -2.4  -3.41051   CGATGGGGAGGAGAA                 CGCC CAG GGCC                 AACACCTTCCCGGAC  47 378
QR90_RS10420 2231297 .. 2231330 - -11.7  -4.13945   AGTTCGATCTGAAAA     TGAGCCGTGGG-ACTG CTT CTGTTCCCACGGCTCC     TTTTTTCAGCCTTCC  86 31
QR90_RS10410 NONE
QR90_RS10405 2227566 .. 2227596 - -15.4  -5.42265   CCAAACCACAAAAAA       GCGCCGCCGGGA TTCAACC TCTCGGCGGCGC       TTTTTTCGTTACTTG 100 43
        leuS 2220678 .. 2220693 - -11.8  -5.39221   ACAAGAACGAAAAAA              GCGGCC CAGA GGCCGC               CTTGATTTCTTCAAT 100 141
QR90_RS10380 2219945 .. 2219965 -  -6.1  -3.33696   GCTCGGCTCAAGGAA            TGCTGAAGG CGG CCTACAACA            GGTAGCCCATCCGCT  52 98
QR90_RS10375 2219104 .. 2219141 -  -9.6   -4.8048   GCCGTAGATGAAAAA   CGGCGCGGCGGCCCAC ACGGCA GGGGGCCGCCTCCGCG    ATCCCTTTCCAGGCC  93 469
QR90_RS10360 2216027 .. 2216057 - -11.2  -2.60392   CAGGCTGCAATCAAG      CCGCCAGCAGCGA GTTTCG TCGCC-CTGGCGG       TTTGACGTTTCCCCT  62 46
QR90_RS10350 2214700 .. 2214726 - -10.9  -4.13767   CGGCGGACCTTAAAA        TGCCCCGC-CGT CAGA ACATGCGGGGCA         GGTCTTCGGCCGGGC  84 49
QR90_RS10345 2214106 .. 2214135 - -16.5  -4.21343   CCGAACACACAGAAA       GGGCCGTCAGG GAATGACT CCTGACGGCCC        TGCTGTCACAGACCA 100 56
QR90_RS10325 NONE
        polA 2206677 .. 2206705 -  -2.3  -3.15861   GAGGATCGGCAGGAA        GCGCAGTGGAT TCATCCT ACCAACAGCGC        CAAATCCACCACTCC  43 178
QR90_RS10310 2204137 .. 2204157 -  -5.3  -3.05844   TGCGCGAGGGCAACA            CGACGCTGA TGA TCGGCGTGG            ACGACGCGAGGCTGG  46 241
QR90_RS10290 2199234 .. 2199244 -  -4.6   -3.2115   GAAAGGACGCAGGAA                 GGCG CCG CACC                 GTCTTAATGGCAGAT  48 75
QR90_RS10285 2198645 .. 2198676 - -13.7  -3.83998   CCACGGCACAGCAAA      GTCCCCGCC-CCTG AACAA CAGGTGGCGGGGGC      TGGTCAGGACAGCCC  86 47
QR90_RS10280 2197801 .. 2197811 -  -8.2  -3.28791   AGGCCGGGGTCAGAA                 GGGC ACC GCCC                 GCACCGCCTGAAGGG  60 9
QR90_RS10275 NONE
QR90_RS10270 2197439 .. 2197456 -  -6.9  -5.28481   CAGGCAACGAAAAAA             CCCCGCC CGAA AGCGAGG              TTTAAACTTGGTGGC  91 34
QR90_RS10240 2188866 .. 2188886 - -11.8  -4.54727   GGGTGCAAAGGAAAA            CGCCGCCC GGGGT GGACGGCG            TCTGAATTGAGGCGG 100 47
QR90_RS10235 2187925 .. 2187965 -  -2.4  -2.85351   GCGCCGCACAGGACA GCGGCGCGGCGTCCCCAGC GGTG GATAAAACCGCC-CACCGC  CTCAGAGGGGTTCCA  40 27
QR90_RS10230 2186425 .. 2186440 -    -6  -3.21099   CGGCCCGATCACGAA              CGCAGC CCCG GCGGCG               CCCATCTGGTGCAGG  50 318
        hisB NONE
        hisH NONE
QR90_RS10210 2183307 .. 2183344 -  -4.7  -3.17075   GTCCGGTGAACGCAA   CCGGG-GGCGGTCCAG ACGATCA CGGGACCGTCGCCCTG   GAAATTCGCGTCCCC  48 64
QR90_RS10205 NONE
QR90_RS10200 NONE
QR90_RS10195 2180308 .. 2180323 -    -6  -4.52589   GCCTCTGACAGAAAA              GCGGCG CTGG CGCGGC               ATTTGTCACAAACGA  74 57
QR90_RS10190 2179491 .. 2179526 - -19.1  -3.53012   CGCGCTCCTTGCAAA    GGCCGTCACCGGG GAAACGAACT CCCGGTGACGGCC     CTGTCCTGCTTGAGC  95 53
QR90_RS10180 2177776 .. 2177803 -  -8.4  -2.71483   AGACTCCCGGAACCA        GGAGCGCAGTCTG GGT CAGACC-CGCACC        GACTGGGCCGAGCGG  52 423
QR90_RS10170 2176957 .. 2176982 - -12.5  -5.55664   TCAGGAGCAAAAAAA         GGGCCGAAGGC GTGA GCTTCCGGCCC          TTTTTCAGTTCAGCG 100 61
QR90_RS10160 NONE
QR90_RS10155 2172378 .. 2172388 -  -4.6   -2.6462   TACGCAGTGAAATAC                 CGCG CAC CGCA                 CCCCGCGTACCGCAC  43 47
QR90_RS10150 2171482 .. 2171509 - -14.8  -4.81212   CCGAGCACAAGAAAA        GCCTCCACCCAC ACCC GCGGGAGGAGGC         GAGACACAGAGACTT 100 40
QR90_RS10145 NONE
QR90_RS10140 NONE
QR90_RS10135 NONE
QR90_RS10130 2168196 .. 2168216 -  -2.4  -2.73364   CCGCCAGCGGAACCA            CGCGCAGG TGGGT CATGCCCG            CACCGCCGCCAGCAC  39 17
QR90_RS10125 NONE
QR90_RS10120 NONE
QR90_RS10115 2165060 .. 2165074 -  -4.2  -2.87468   GTCCAGTACAGGACA               GCGG GCTACAG CCGC               AGGATCATCCCCCCC  44 16
        aroA NONE
QR90_RS10105 2162391 .. 2162402 -  -7.2  -3.21099   CTGGCCCACGAGGAA                CGCC TTCT GGCG                 GGCCTGAGCGCCGGG  53 108
QR90_RS10085 2159578 .. 2159619 -  -5.7  -3.26722   GCGACACGCAGAACA GGGTGGGCCGGCCGG GCATCAAGTCTT GCGGCCAACCCTCCC  AGCAGCTTCAAACGG  52 45
QR90_RS10080 NONE
QR90_RS10075 2158116 .. 2158145 -  -4.7  -2.53263   CGCAGGGTCAAGGGA       GCGGGGTCAGGCG TTTA CGCCAGGCGGCGC        ACGCAACCCCGCGCG  43 10
QR90_RS10070 2157537 .. 2157559 - -12.6  -2.78463   ATGGGGCGCAGCATA           CGGGAGCCTG GCC CCGGCCCCCG           CGTCCCGGTTTAGCT  68 35
        purU 2156499 .. 2156533 - -16.4  -3.84451   TTCTCCAAACTGAAA     GCCCTGGTGCGCGGTG CCT CACCGCGCACCATCAC     GAAGGTCATCGCTAA  95 131
QR90_RS10045 2145007 .. 2145034 -    -9  -3.05384   CTGGCGGTCACCGAA        GCGGCGCGGGGGC ATG GCCTCGGCGCC-C        GGCTGTTGCAGGAGG  55 225
        hemB NONE
QR90_RS10000 2137954 .. 2137967 -  -4.5  -4.15565   GTGATCATGGCAAAA               CCTCC GGTG GGAAG                GGGCGCTCAGACGGG  63 32
QR90_RS09995 NONE
QR90_RS09990 2137021 .. 2137034 -  -3.1  -3.86822   GAACCCGTCCAGAAA               GC-GCA CGC TGCCGC               CACAGGCAGACGACT  56 57
QR90_RS09985 2136573 .. 2136600 -    -4  -3.34404   TCATGAACCAGAACA        CCGGC-GTGTGGC GCT GCCGCACCGCCTA        CAACTGCACCGAGGC  47 141
QR90_RS18120 2132682 .. 2132712 - -10.5  -2.73701   TTCCATTAAATCAAT      GGGGCCA-ACGC GATTAACT GCGTGTGGCCCC       TTACACTTCTAAGTT  60 46
QR90_RS09950 2129858 .. 2129872 -  -8.5  -4.99134   ACTTCAAATGAAAAA               CCCGC GCTGG GCGGG               CTTTTTTGGTGGGCG  93 32
QR90_RS18110 2128563 .. 2128575 -  -4.7  -2.70932   GGGCCTGTCGAACTA                GCGTC ACC GCCGC                CCCGCCGCTTGCCGG  44 124
QR90_RS17710 2127335 .. 2127346 -  -5.8  -3.13403   TTTCCCCGATCAACA                CGGT GCCC ACCG                 TCGTGGCCGGGCGTT  50 330
QR90_RS09920 2125842 .. 2125864 -  -9.9  -4.05788   GCGCGGGAAACGAAA          GCCGGGTGCT GGAC AG-ACCCGGC           GATATGACGTGGTAT  78 353
QR90_RS09900 NONE
QR90_RS09895 2121549 .. 2121566 -  -5.5  -4.40605   AGCGAGAAAGAGAAA             GACGTCC CTCC GGACGTG              GAGTGTAGAAACCGG  74 80
QR90_RS09890 2120153 .. 2120173 -  -2.3  -3.05844   GCGTTGAGGCGAACA            GGTGAGGCG AGC CGCGGCGCC            CAGTCTTCACAGCTT  41 32
QR90_RS09885 NONE
QR90_RS09880 NONE
        fetB 2117199 .. 2117227 -  -8.1  -3.36273   GGCGGGCAACACCAA       CGCCCCGGCGTG GCGCAA CACGCCGGC-CG        GCTGCCGGGGCGTGA  55 411
QR90_RS09845 2110855 .. 2110881 - -19.5  -2.66733   CCGCAATGCAGATGA         GGTCGCCGCTG GAGAA CAGCGGCGACC         TGGGCGGGGAGAGCT  82 419
QR90_RS09835 2107263 .. 2107287 -  -7.7  -3.31144   CGCCGACGGCCACAA          CCCCAGCCACG TCG CCCGGCCGGAG          CTGGAGCGACTGAAG  55 214
QR90_RS09830 2105589 .. 2105603 -  -8.6  -3.65351   GGACTCCGATTGAAA               GGTGTT GGA AACACC               TGGAAATCCGAGCGG  65 127
        aphA NONE
QR90_RS09760 NONE
        ispD 2088159 .. 2088175 -  -6.5  -3.68506   CAACACGCACGGAAA              CGAACCG GGG CGGTTCC              GTGTGCCTCGAAGGC  62 42
QR90_RS09750 2087279 .. 2087289 -  -2.4  -3.28712   CGTCTGGGTTTACAA                 CGTC TGG GCCG                 GCTGGACCCACCACT  45 9
QR90_RS09740 2083902 .. 2083916 -  -7.8  -3.35438   TATCAGATTTGAGAA               CAAGGC TCA GCCCTG               TCCCTTCGTCTTATC  58 17
QR90_RS17250 NONE
QR90_RS09735 2083125 .. 2083135 -  -3.2  -2.74144   TTGTGACGGGTAAAC                 TCCG CCC CAGA                 ACTTTTGCATCTTCG  40 114
QR90_RS09730 2081536 .. 2081559 -  -4.5   -3.2614   CAGGCTGGACACGAA          CAG-GCTGGC AGACG GCCCGCACTG          GTGTTGACGCCAGCC  49 284
QR90_RS09715 2080165 .. 2080204 - -18.6  -2.92792   ACCCACTGGAAATGA  GCGGGCCAGC-TCACCCCG CGC CGGAGGAAGGCTGGCCCGC  TGCTGCCAGAGCTAC  91 37
QR90_RS09710 NONE
         tmk 2078298 .. 2078315 - -12.7  -4.25283   ACCTGGCGAGGAAAA             GCCTCGC ATTC GCGAGGC              TGAGGATTCACCGGG  88 377
        priA 2068685 .. 2068709 -    -7  -3.72893   TAGCCGTCGAGGAAA          GGCCCTCTCC CAGGT GGAGGGGGCT          TCTTTGATGCCTACA  62 36
QR90_RS09630 2058820 .. 2058843 -  -2.2  -4.17556   GAGAGTCTGAAGAAA          GGGTGGAGCG CCGT CCCTCTGCCC           GTTCCGTACCCTCAT  59 47
QR90_RS09625 2058157 .. 2058181 -   -15   -4.5954   GGATAGCATAGAAAA         CCGCCGG-GCC ACAT GGCTCCGGCGG          GGGGCAGAATCGTCC 100 42
QR90_RS09620 NONE
QR90_RS09615 NONE
QR90_RS09610 2056054 .. 2056108 -  -2.7  -2.75844   GCGGGCAGGTCAAAC CGCTGAACATGACCCTCCAGCCACCGC CGG GCCGTGGCATTCCGGTCATG--CAGCG TGCCGTCCAGATCGA  39 53
QR90_RS09605 2055353 .. 2055380 -  -6.3  -3.14564   CGACGCCCTGACCAA        CGTCC-GGCC TTACAAGCG GGCCTGGACG        GTCAGCGAGACCCTG  50 155
        pheS 2051594 .. 2051606 -  -3.4  -3.15324   TATGGCGATTAAAAT                GTAG GTGGT CTAC                CCCAACTCCCCCCGG  44 22
QR90_RS09585 NONE
QR90_RS17225 NONE
QR90_RS09580 NONE
QR90_RS09575 2050007 .. 2050017 -  -2.4  -4.43189   ATGAATCGGAGAAAA                 GCAG TCT CAGC                 CAGCGATTTGTGCGA  65 21
QR90_RS09570 2047471 .. 2047499 - -16.7  -3.65902   TTGAGGGTATGGAAA        GGGGGCCAGAGCC CCT AGCCCTGACCCCC        TGTTCAAGCTTTCCT  91 39
QR90_RS09555 NONE
QR90_RS09545 2043082 .. 2043096 -  -5.6  -5.16237   AAGGCCACGAAAAAA               GCGCTG TGT CAGCGA               GAGGGGAAGGCGGCC  87 183
QR90_RS09540 2042236 .. 2042251 -  -4.7  -3.37487   GGATAGCGGGAAACA              GCCAT CGGTAC ATGGC               GACAGCGTAAACCAC  50 145
QR90_RS09535 2040966 .. 2040976 -  -8.2   -4.2828   GGCCAGCTATGAAAA                 GGGC CAG GCCC                 TGGGTCAGACCCGCT  78 215
QR90_RS09525 2038892 .. 2038907 -  -2.4  -3.53091   AGCGGTCGGCCGAAA              GGCCGA GCAC CCGGTC               AGCGCATCAGGCCGG  47 24
QR90_RS09520 NONE
         def 2037758 .. 2037773 -  -3.2  -3.01712   CGCGGCCTGGGAAGA              GGCG TCACTCAC CGCC               ACGCTCACGGCGCAG  43 14
         fmt 2036797 .. 2036807 -  -2.4  -3.53012   GCCCCGCCGCTTAAA                 GCTG CTC CGGC                 CCCCACACGTCAAAG  47 10
        dkgB 2035866 .. 2035880 -  -2.7  -2.63236   GAACGCAAGATCAAC               GGGCG TGGTC CTCCC               CTCCTCCAACGTTCA  38 38
QR90_RS09500 2034645 .. 2034657 -  -9.1  -3.51825   CCAGGTGAAGGACAA                GGCGT CCG ACGCC                GCAGATCAGGCCAAA  61 376
QR90_RS09485 2032455 .. 2032483 - -10.1    -3.727   GCCAGGACACGGAAA        GAGGTCGGGCGTG ATG CCTGCCCGGCCTC        GAATCCAAAACACGC  74 41
QR90_RS09480 2031560 .. 2031578 -  -4.4  -3.75024   GGCCAGCACGAACAA             GGCCATTC CAG GGCTGGCC             GGACAGAATCCCAGC  55 498
QR90_RS09465 2028559 .. 2028579 -  -7.5  -4.72272   TGGCCGCATGAAAAA            GGGCCGC GCAGACG GCAGCCC            CTATGCTCTCCTGGG  86 47
QR90_RS09460 2027251 .. 2027261 -  -2.4  -2.62263   AGCGGTGGCAGACGA                 CGGC GTG GCAG                 CGGGGACGGTCAGAC  38 77
QR90_RS09455 NONE
QR90_RS09450 NONE
QR90_RS09445 2023890 .. 2023905 -  -3.2  -3.29461   GAATCCCGCCGACAA              CGCG GAGATCGA CGCG               GTGTGGCTGGGGCCG  47 319
QR90_RS09425 2020635 .. 2020666 -  -5.2  -3.31792   CGATCATGTCGAGAA      GGGACATGGGC CGAGTATAGGC GCCCA-GTCCC      TCTTGCGGCCGGGAA  50 104
       sdaAB NONE
        hutU 2017363 .. 2017387 -  -2.6  -2.75844   CCCCGTAGGGCAAAT          GGGCGGGCTG GCTCA CTGCCTGTCC          TCAATCCCCAGGCTG  39 13
QR90_RS09405 NONE
        hutI NONE
        hutH 2013577 .. 2013610 -  -7.3  -5.11937   AAGAAGTGCAAAAAA     CTGTGCCCTGCGCCGT TGG ACGGCGCA-GGTGCTG     GCCCGGAAGATGCCC  93 194
QR90_RS09390 2013142 .. 2013185 -  -2.5  -2.96274   TGGCCCACAACGAGA CGTGAGGGTGGAGCCGCTCCGC TGC GCGAAGCCGCTCCA-C-T-AGG ATTTTGATTTGAACG  40 21
QR90_RS17220 2012379 .. 2012426 -  -4.6  -3.84246   TGGCGAAGCAGGAAA CCCACCTGCCGGTGATCGTGGAC GTG ACCCACG-CCGCCGGCCGCCGCG ACCTGCTGATTCCGC  60 217
QR90_RS09345 2004812 .. 2004833 -  -7.1  -3.18199   GAAGGCGCAACTGAA           CCGTGACGC TGAC GCGGCGCGG            GCGGTGCTCAGGGAC  53 33
        tilS NONE
        lysA 2000341 .. 2000355 -  -5.6  -3.08679   CGGGGGTACGGAACA               CGGGGT AAA ACGCCG               CTTTAGCCGGGCAAT  49 28
QR90_RS09310 1996249 .. 1996284 - -12.4  -4.19735   CGGGGCAAAAGCAAA    GGGCCAGGGCCGGACG CTCG CCCACGGCCCTGTCCC     CACGCGGCGGCACGG  86 48
QR90_RS16785 1994432 .. 1994444 - -10.5  -3.36273   GGCCTCCAACAGCAA                GGGCG AAG CGCCC                GCCTCCTGCACATTG  66 163
QR90_RS17690 1994070 .. 1994092 -  -3.2  -3.20307   CGAACAGCAGGAACA           GCATCACGGG AAG CCAGCGCCGC           AGCCAGGCACGGGTG  44 59
QR90_RS09290 1991790 .. 1991826 - -12.4  -3.57144   GGTCTGAGGGTCAAA    GGGTCTAAGAAAAGCC CTTGC GCCCTTCCTTAGACCC    TTCGACTCTTGACCC  75 41
QR90_RS09285 NONE
QR90_RS17685 NONE
QR90_RS09280 1990278 .. 1990298 -  -9.7  -2.87564   CGATGCCTTTAGATA            CGGGTGG GGCAGAA CCACCCG            TTTCGCTTTGCCTCA  58 38
QR90_RS09275 1989911 .. 1989936 - -10.5  -5.47218   GGGGACTCAAAAAAA         CCATCCGTC GCATGAAT GACGGATGG          AGACATGGAGCCTGA 100 52
QR90_RS09270 NONE
QR90_RS09265 NONE
        nagZ 1978918 .. 1978930 -  -6.2  -3.30441   GATCACGGTGGACAA                GGCG ACGGG CGCC                TACACCAATGTCAGC  52 321
QR90_RS09220 NONE
QR90_RS09215 NONE
QR90_RS09210 1975116 .. 1975148 - -11.2  -3.67878   AGGAGTGCAAGACAA      CGACTCCCCCGCCC AGAGG GGGCGAGGGACTGG      GGCAGTTCATAATGG  73 68
        rpsB 1974018 .. 1974057 - -15.7  -3.65522   GATTCACGGCAAGAA  TGGGGGGCGCGGCC-CGC TTACC GCGCAGCGACGCCCCCCA  CTCTGAACCCGGGTT  86 57
         tsf 1973153 .. 1973175 -  -9.8  -5.00616   CGCGGCCCGAAAAAA           GAGGCGGC CATCTGC GCCGCCCC           TCCTTGTTGATCACG 100 36
        pyrH 1972302 .. 1972324 -  -4.1  -3.21276   CGCGTGGGGAGAAGA          GCA-GAGCCG TGAT CGTCTCGTGC           GAGGTTCCCCCACCA  47 53
         frr 1971626 .. 1971638 -  -4.8  -3.09516   GCGTGGACCATGGAA                GACC CCCAT GGTC                CACGCGCCGCAGGTC  47 58
QR90_RS09185 1970641 .. 1970681 - -22.8  -3.64703   TCCCTGGCACGCAAA  CAATGAACCGGGCGGAAA GAAAG CCTCCGCCCGGTTCATTG  AGACACCACTGTATT 100 90
QR90_RS09175 NONE
QR90_RS09170 NONE
QR90_RS09165 1966552 .. 1966569 -  -2.6   -4.2803   CAGTTTAAGCCAAAA             GGACGC TCGGCC GCGTCG              CCCCGTCCAGTGAAG  62 225
        ychF 1965135 .. 1965156 -  -5.8  -3.05463   AGGCCTCGGATCGAA           CAGGCTGG CCCGCC CCAGACTG            GCCAGAACGACAGGT  49 254
QR90_RS09155 1963894 .. 1963916 -  -5.4  -4.14739   GTACTGAGGGCAAAA           GTCGTTCGGG CCG CCCGACCACC           AAAATCGCGCCACCA  65 131
        mqnC 1957896 .. 1957909 -  -9.5   -2.7185   AGCATGGCTTAACCA               GCCGC CAGC GCGGC                CCCAGCCCCCACCGC  57 5
QR90_RS09125 1957314 .. 1957331 -  -6.3  -3.03243   ACGCATTGTTCAACA             CGCCAGAG GAC CTCTGG-G             AGTCACGCCAGCGTC  51 154
QR90_RS09115 1954606 .. 1954646 - -26.9  -3.77087   GACTGAAGACGCAAA  GGGCGGAGGCCGGAGCGCA ACA TTCGCTCCGGCCTCCGCTC  TTTTTTGTCCCACTC 100 176
        uvrA NONE
QR90_RS16775 NONE
QR90_RS09095 NONE
QR90_RS09090 1947680 .. 1947710 - -14.1  -4.09685   GTCGACCTCTGAAAA       GAGCCACTGAACA AGGCG CGTCCAGTGGCTC       AGGAAATGGGGAAAG  90 43
QR90_RS09085 1946582 .. 1946605 -    -8   -3.1876   AACCTGAGCGACGAA          CAGGCCGCCG TCTA CGCCCGCCTG           CGCGAGTGGCGCAAC  53 262
QR90_RS17995 1943921 .. 1943933 -  -4.7  -2.87132   GGGCGCCGTGAGACA                CCGTG CGG CGCGG                GTCAACGCAGCGTCG  46 27
QR90_RS09070 1942579 .. 1942606 - -15.6  -3.41053   CCAAAGCACCGACAA        GGCCCGCCAC GAACAACT GTGGCGGGCC         TTCTACCGATTAAAG  85 42
QR90_RS09055 1937411 .. 1937423 -  -6.9  -2.88544   CCGGAGGGGTAGACA                CCGCC CTC AGCGG                GTGGATTGGGTGTTT  50 39
QR90_RS09045 1936032 .. 1936045 -  -3.8  -2.52464   CGGCGCCGGAAGTCA               CTGG CCCACC CCAG                CAGCGGCCACAGCCC  41 9
QR90_RS09040 NONE
QR90_RS09035 1934456 .. 1934477 -  -3.7  -3.16982   CCCACACTAACAAAC           GTTAGGTCGA AAG TCG-CCTGAC           CGCCCTACACGCCGC  47 30
QR90_RS09030 1933330 .. 1933364 - -11.6  -2.56177   AGAGGTCAGACCAAT     TCCGGTTGAACAGTTC CAA AAACTGTTCAACCCAA     GCGGAGCGAGAAGGA  65 241
QR90_RS09025 1931624 .. 1931662 - -21.9  -2.72855   TAAACGGGGTAAGCA  GCAGGGGGAGGCAGGGCCA CAC TGGCC--GCCTCCCCCTGC  TGCTCTCGTTGTGCC 100 165
QR90_RS09015 NONE
QR90_RS09010 1928080 .. 1928119 - -20.1  -4.61231   GCATAGGCGCAAAAA  GACGGGGGAGGCCGGGCC GCCAT AGCCCG-CCTCCCCCATC  ATTTGAGTGCGCTCA 100 38
         gnd 1926396 .. 1926425 -   -10  -3.60661   GAGGGAAGGAGACAA       GACGTTGTCGCC GGGTCA GGCAGCAACGTC        TTCGCCTTGTTGAAA  70 45
QR90_RS08980 1921394 .. 1921408 -  -4.2  -3.14132   TGTTTCGTGTAGGAA               CCGG GAGAGCG CCGG               TTCCCACACTCCACG  47 138
QR90_RS08965 1918197 .. 1918209 -  -3.3  -3.53091   AGGCGGGCGGTCAAA                CCTGG CGG CGAGG                GCGAGGGACTCTGGA  49 126
QR90_RS08960 1918028 .. 1918047 - -11.4  -4.87291   CAGCCCAAGCAAAAA            GCCCACGC AGAC GCATGGGC             TTGTGCTCCTGGTGG 100 38
QR90_RS08955 1916896 .. 1916924 -  -2.5  -2.80291   AACGAGGCCACGACA      CGGCAGGGGCGGTC ATTG GAC-GCCC-T-CCG       GCTGCGGCGCGGCCA  39 9
QR90_RS16770 1915981 .. 1915997 -  -5.1  -2.70932   CGTGGCCGGCAAGTA              CCTGC AACTGCG GCAGG              CGTGTGGGGGCTGGG  44 85
QR90_RS08880 1897346 .. 1897366 -  -9.7  -3.54424   TCGGATTTCTGGAAA            GCGCCAG TCGGCAT CTGGCGC            ATGAGTGGCGTGGAT  68 316
QR90_RS16760 1896765 .. 1896786 -  -7.3  -3.54424   TGCGACGGGGTCAAA           GATGCGC CCGTAACT GCGCATC            ACGCGCGCTCGGCGT  62 24
QR90_RS08870 1895229 .. 1895244 -  -3.2  -2.73681   GACCGAGGCTAAGGA              GGAAGG ATTT CATTCC               GGATCATCTGCGGTT  40 19
QR90_RS08865 1893503 .. 1893527 - -12.1  -3.11072   CCCATCCAAGACAGA          CGCCGACGACG CCA CGTCATCGCCG          GACAGTAAAGCAGTG  68 49
        nucS 1890404 .. 1890422 -  -5.3  -3.27923   CCTCAACAGCATCAA            GCA-GCCA AGCG TGGCGTGC             GACAGGGCGGCGTCC  50 412
QR90_RS08840 1889437 .. 1889468 - -10.1  -3.34398   GTTTGCCGGCAAAGA      GGGGATGCGCAGCC GGGTG GGC-GCGCACCACC      GCACCCTGAGCACCA  63 487
QR90_RS08825 NONE
QR90_RS08820 NONE
QR90_RS08815 NONE
QR90_RS08810 1884266 .. 1884309 - -10.2  -3.53091   AGCGCCTCCCCGAAA GTCAGGACGCTGGCCG-GACC ATC AGCCACGGGCAGCCTCCTGCC GGGTAAAGTCCAGCA  68 3
QR90_RS08805 NONE
QR90_RS08800 NONE
QR90_RS08795 1881665 .. 1881680 -  -3.2  -2.67392   GAGAGGAAAAGAGAG              GCCC TTACGGGT GGGC               GCGCGCCACGAGTTC  39 14
        dgoD 1880391 .. 1880404 -  -2.3  -3.94746   TGACACCTAAGGAAA               GGTAG GTGC CAACC                AGAATCCTGAGACGA  54 104
QR90_RS16750 NONE
QR90_RS08780 NONE
QR90_RS17990 1877546 .. 1877562 -  -5.7  -3.53012   GTCCGCGCCGTGAAA              GGCTCAG TTT CCGGGCC              GGCAACTGCCGTCAG  55 419
QR90_RS08775 NONE
QR90_RS08770 1870811 .. 1870854 - -12.3  -2.62184   CTGGGTGCCAGATGA CGCGGCGGGCATCTGCAGG TCAGGG CCTGCGGATGCCTCCAGCG GGAACACAAGCTTCC  65 153
QR90_RS08760 1869102 .. 1869127 - -16.9  -3.06183   CCGATGGGGAGGCAA         GCACTGGCCCC AGCC AGGGCCAGTGC          TTGCGGGGGACTGCA  88 131
QR90_RS17985 1868456 .. 1868499 - -12.7  -3.05022   TCGCCCAGACAGACA CTCGAGGATGGAGCAGCTCCGC ACG GCGGAGCTGCTCCA--CT-AAG ACTTTGTTTTGAACG  71 21
QR90_RS08750 1867837 .. 1867858 -  -6.5  -3.28924   CAGTCTCGTCCAGAA           CGGTCCCTT GAGG AAGGAGCCG            AGTGCGGTGCACCGC  55 99
QR90_RS08745 NONE
QR90_RS08740 1866337 .. 1866362 -    -4  -3.42354   CAGCTGAATGGACAA         CGGTTGGTCCA TATCC TGGAGCA-CCG         CGCGCAGACTGGTGG  51 158
QR90_RS08735 NONE
QR90_RS08730 NONE
QR90_RS08725 1862260 .. 1862299 - -23.6  -4.08945   AGGACGGCTTGAAAA  CCGACAGAGCGGCGCGCC CATG GGCGCGCCGCTCTCTTGG   CTAGACCATCAGATG 100 26
QR90_RS08715 NONE
QR90_RS08710 1859999 .. 1860026 -  -2.5  -3.56099   GACAACCCCCGGAAA        CGGGCTGCTGG TGCGGG CCAGCGTCTCG         TTTCACTGCGCCGAG  49 489
QR90_RS08705 1858359 .. 1858380 -  -6.5  -2.78816   TTAGCCGCTACCAGA           TGCGCGGTGG ACC CCACC-CGCC           ACGCGATCGCCGTCC  49 66
QR90_RS08700 1855983 .. 1856001 -  -3.8   -3.2218   CGGAACACGCATCAA             CAAGACCC TGG AGGTGTTG             CTGCGGCCGCATGTG  45 392
QR90_RS08675 NONE
QR90_RS08670 NONE
QR90_RS08665 1841790 .. 1841820 -  -6.6  -2.80816   GTCGCACCGACTATA       GCCGCTCGCGCCCC TTC GGGGGGCGCACGAT       CCGAAGGGAGCGTCC  49 125
QR90_RS08660 1840518 .. 1840553 - -15.4  -3.28712   GGTGCGTCTCGAGAA    GGCCCGGTTCCCACCG GCGC CGACACGAACCGGGCC     AGAGGGAAGCAGTCG  84 113
QR90_RS08655 1839328 .. 1839354 - -11.5  -3.59979   CCGCCTGACGCGAAA         GGCGCACCGCC GCTAA GCCGATGCGCC         TACCGTCCTGCCGTG  73 144
QR90_RS08650 1838292 .. 1838318 - -10.1  -2.78934   CCACAGACGCGAAAT        CGGAGGCCAGCC TTCA GGC-GGCCTGCG         CAGCCCGGCCCGCCC  60 12
QR90_RS08645 1836689 .. 1836704 -  -6.8  -3.57144   GGTGCGACGCTCAAA              CG-GGCG TGT CGCCGCG              GAGCGGCCGGCGGAG  59 5
QR90_RS08640 1834584 .. 1834596 -  -3.3  -3.29144   GCATCCGGGCGACAA                GGGTA ACG TGCCC                TTCGAAGCCTGGCCC  47 373
QR90_RS18360 1832974 .. 1833019 -  -5.4  -3.78934   GTTGCCCGAGAACAA CACGAGAGC-CCTCCAGGTCGTC GGT GACGGCGTGGCGGTGC-C-CGTG GTCAGGTATGTGTTG  58 402
QR90_RS08625 NONE
QR90_RS08620 NONE
QR90_RS08615 1826996 .. 1827023 - -24.2  -3.08371   GACAGCTTGAACACA        GAGCGGCGCGCC CCCA GGCGCGCCGCTC         CCTTGGCTAGACCAT 100 32
QR90_RS17640 NONE
QR90_RS16740 1808259 .. 1808289 - -16.9  -2.63913   CACCACTGGACAGGA       GGCAAGCCCAGCC GCCAG GGCTGGGGTTGCC       CGAGCATGCGCCGTC  83 140
QR90_RS18355 1807933 .. 1807949 -  -3.6  -3.13403   TGTCCCGCACCAACA              CGGCGA GGTGG TCGGCG              GGCTCGTTTTCAGGA  44 35
QR90_RS08545 1797180 .. 1797202 -  -4.1  -3.72757   TATAAGCCAAGAGAA           TTTGCGTGA GAACG CCACGCACA           CAGACGTCATGTCTC  56 91
QR90_RS08525 1790969 .. 1790989 -  -5.3  -3.14931   CCGACTGCTCAGGAA            GTGGCGACG TGG CGTCTTCAC            ACTCTGAGAGCGGGG  48 89
QR90_RS08520 1790082 .. 1790093 -  -3.6  -2.67477   AATGAAGCGAGATCA                GGCA TGGA CGCC                 TTCCTCCTTTAATGC  39 11
QR90_RS08515 1788600 .. 1788641 -  -7.1  -3.83568   GCATATTCAGAACAA CGACGACGCCCACCCCTGTC GAA GTC-GATGAGCGCGTCGTCG TAGATGCAGTGCAAG  65 484
QR90_RS08510 1780723 .. 1780742 -  -3.5  -3.17075   CGTCGCCGAATGGAA            CGCCAGT CACGAC ACCAGCG             CCCGCAGCACGAAGG  44 12
QR90_RS08505 1777656 .. 1777675 - -11.4  -3.22298   GGCACCGAGGAGGAA            GCGCTGGC CCTG GCCAACGC             GAGTGAGTACGGCCT  64 455
QR90_RS16720 NONE
QR90_RS08465 NONE
QR90_RS08460 1768506 .. 1768524 -  -2.2  -3.72576   GGTCTCCTTAGGAAA             GCGCGGCC CAG GGTCAGGC             GCGGGTACGGTGCCG  52 20
QR90_RS08455 NONE
QR90_RS08450 1765688 .. 1765699 -  -7.2  -2.92246   CGAAGCGGAACTACA                CGCG CTGG CGCG                 ACGCGCTGTTCGTCT  50 253
QR90_RS08435 1763526 .. 1763554 -  -7.3  -3.74693   CTGCATGTGACCAAA        TGGGACCTGAGCG CGG CCCTCAAGCCCCG        CCGGGACCTGGCTTG  64 501
QR90_RS08410 1758828 .. 1758848 -  -7.5  -3.39327   GCCGTAGAGGCACAA            GGCCACACA CGG CGTCTGGCC            AGGGAAACGTTGTGC  58 106
QR90_RS08340 NONE
QR90_RS08335 NONE
QR90_RS08330 1739956 .. 1739966 -  -5.4  -2.95316   GCGAGACACAAGAAC                 TCCT TTG AGGA                 CAGCCATTGGTTGCG  46 68
QR90_RS08325 1738458 .. 1738507 -  -9.1  -4.72272   GTGGTGCACCAAAAA TTCCGACAGAGCGTCCCCACCCGC CAG GAGGGTGGGG-CACACTGGAGGGA ACCTATGGGAAGCAG  93 493
QR90_RS17630 1737703 .. 1737729 - -20.9  -3.51825   CCATCGTAATGAGAA         GGGTGCCCGGC TTCCT GCCGGGCACCC         TGGACCCCGTCAATC 100 87
QR90_RS08315 1736273 .. 1736288 -  -8.2  -4.14739   GCAGGCACTTGAAAA              CGGCGA TCTC CCGCCG               AGGACAGCTGGCTCG  76 331
QR90_RS08300 NONE
QR90_RS08295 1732909 .. 1732946 - -24.3   -2.9356   ACTCAGATGCATACA   GCACACAGGCCAGGGGA ACTT TCCCCTGGTCTGTGTGC    ATCAGCGGCTTTATG 100 36
QR90_RS08275 1730608 .. 1730643 - -20.5  -3.60805   AGACCCTACGGGAAA    TCGGCACGGCTCTGG GACCAT CCAGAGCCGTGCCGG     TGTAGTGACAGTGCC 100 52
QR90_RS18350 NONE
QR90_RS08245 1722999 .. 1723010 -  -2.2  -3.53444   CCATCCGCGCCGAAA                TGCC CGAC AGCA                 GCATCACCATTCACG  47 102
QR90_RS08235 1720750 .. 1720768 - -13.1  -5.36441   CCGGCACAGAAAAAA             CCCCGCC GACGA GGCGGGG             CATCACAACCACAGG 100 48
QR90_RS08220 1718804 .. 1718820 -  -3.6  -2.89683   ATGCCATTGCACACA              GCACCC ATTGG GGGTGA              CCCCGCCCCTCTATG  42 97
QR90_RS08215 1718361 .. 1718395 -  -6.5  -3.42996   GAGCATCTAGGAGAA     TGGAGGCATTAGAAA AATGA CTTCTGATGCCTTCA     TTCTCTGCTCCGCAG  57 143
QR90_RS08210 1717435 .. 1717466 - -15.9  -3.91196   TTTAGAGAGACGAAA      GAGGCCGGGCG TGGATGGAAC CGCCCGGCCTC       TTTCCTATTCGTTCT  91 82
        smpB NONE
QR90_RS08190 NONE
QR90_RS08185 NONE
QR90_RS08180 1709407 .. 1709441 -  -3.3  -3.78775   GCCGGTACGAGGAAA    GCGC-GGGCCGACTGC GGAT GCCGGTGGCCCTGCGG     GCCAACCACGCGGCC  55 112
QR90_RS08170 1708339 .. 1708371 - -20.7  -4.18018   GCGTGGGAGGCAAAA      GAGTGACCGGGGC GAAAACT GCCCCGGTCACTC      CATTTTTGTATCGCG 100 50
        hrpB 1703538 .. 1703592 - -11.3  -3.21416   CAGGCTCAGCACGAA CCGCGCCCGCCGCCAGCCCAGCGG GGCGTAGG CAGCCGAGACGACGGCGGGC-CAG AGCGTCAGACGCCCC  67 30
QR90_RS16710 1702917 .. 1702964 -    -4  -3.56092   CGACCACGGGGGAAA CAGTGCGGACCAGCGC-GCCGG GACTGG CGGGCAGCG-TGGTCAGCCCGG CCACATTACAAGAGA  53 17
        wecB 1701688 .. 1701700 -  -4.1  -3.35798   AGCGCTCACGTACAA                CACAT CAT ATGCG                CTGGACCGTGCTCTA  48 38
QR90_RS08140 1700722 .. 1700738 -  -5.1  -2.90901   AGAGGCTCAAGTAGA              CTGAGTT TTA AACTCGG              GCGTCTCTTAGCCGT  46 33
        hisA 1696525 .. 1696545 -    -4   -3.5393   ATCACGCTGCTGAAA           CGGCACGAA ACGT TTC-CGCCG            TACACCCGCCGCCTG  51 220
QR90_RS08105 1693252 .. 1693272 -  -5.3  -4.60487   CAGGACCCCGAAAAA            CAGCACCTC GTT GCGGTCCTG            CAGGGCGCGCAGGTA  74 414
QR90_RS08095 NONE
QR90_RS17185 1688664 .. 1688682 -  -8.8  -3.19789   AGAGCGAAGAGTGAA             GGCGGG TCTCCAG CCCGCC             TCTCTTTTAGTCTCT  58 94
        sucC NONE
        sucD 1684246 .. 1684279 -  -7.3  -5.11937   AAGAAGTGCAAAAAA     CTGTGCCCTGCGCCGT TGG ACGGCGCA-GGTGCTG     GCCCGGAAGATGCCC  93 128
QR90_RS08060 1683811 .. 1683854 -  -2.5  -2.96274   TGGCCCACAACGAGA CGTGAGGGTGGAGCCGCTCCGC TGC GCGAAGCCGCTCCA-C-T-AGG ATTTTGATTTGAACG  40 21
QR90_RS17180 1683230 .. 1683254 - -11.5  -4.57755   AGGTAGCACAGAAAA          GAGACTGCC CTTCGTT GGCAGTCTC          TCGTCAAAAAAGTTG  95 58
QR90_RS08050 1682326 .. 1682348 -  -5.6   -3.1203   CAAGTAGTGAATATA           TTCACGATCA ACC TATTCGTGAA           TTTTGTATTTCCGTC  51 40
QR90_RS08045 NONE
QR90_RS08040 1680607 .. 1680644 -  -4.6   -3.9461   CTTTCCCAAGAACAA   CCGGGGCGCGGACCTG ATGGCG CAGGCGCCCTCCCCTG    TTTCGGAGGGGCAAC  60 161
QR90_RS08020 1676060 .. 1676071 -  -2.2  -3.67602   AGACAGCGAAAAAAT                CGAC TCCC ATCG                 GGCCGGTTCTTTGGG  49 141
QR90_RS08010 1674339 .. 1674352 -  -3.7  -3.35679   GCGCGCCATCGAGAA               CCGGC GCTG GCTGG                TCCGCAGCGTCAATA  47 245
QR90_RS08000 1672255 .. 1672281 -  -5.8  -3.70902   CTTCTGACAGGGAAA        GGGGGCGAGCC GTTCCA GGGT-GCCCCC         TTTCCCTGTGTCGGC  60 43
QR90_RS07990 NONE
QR90_RS07985 1669167 .. 1669182 -  -2.4  -2.74263   AGGGTAGCGGGAAAT              CCGTAC TGGG GCGCGG               CGGCGTTACAGGTAC  39 31
QR90_RS07980 NONE
QR90_RS07975 NONE
QR90_RS07970 1666002 .. 1666027 -  -4.9  -3.24447   CATAGGCGACAAAAT         TTTCACGA-ACA AGA TATATCGTGAAA         CAATTCACTTACGTA  48 52
QR90_RS07940 NONE
        ileS 1656700 .. 1656721 -  -3.6  -3.17075   GGGCGGCGAACTCAA           GGCCCTGC GGCGCT GCAAGGCG            GACCACGCCATTCCG  45 320
        bshA 1654717 .. 1654740 -  -5.4  -3.26675   TAAGCGAATCAAAAT          TTCACGAT CTAGAATT ATCGTGAA           TCATTTCACTTACTA  50 69
        uvrC NONE
QR90_RS07905 1650353 .. 1650381 -    -8    -3.885   ACGCCCATAGAACAA       GGCCGCGCTCTCG TTCC CGCT-GCGCGGCC        CCTGTGCTGCCGGCA  68 46
QR90_RS07895 1648970 .. 1649003 -  -5.1  -4.56597   CCCTGGCCTGAAAAA     GGGGCTGGCGAGCAGC TGG GC-GCTGACCTGCCCA     GCGTCCTGGGTCAAC  74 54
QR90_RS07890 1647659 .. 1647672 -  -3.8  -2.57881   GAATTTCTTCATAAT               GACC TCCACG GGTC                TGTTGAAAGCGCTTT  41 85
QR90_RS07885 1646335 .. 1646351 -  -2.2  -3.68351   CGCTCAGGATGCAAA              CGTTCC GTTCG GGAATG              GCGAGGGGGAGCCGC  52 82
QR90_RS07880 NONE
QR90_RS07875 NONE
QR90_RS07870 NONE
QR90_RS07865 NONE
QR90_RS07860 NONE
QR90_RS07855 1637834 .. 1637865 -  -8.8  -3.27498   GACAGGGGAGAGCAA      CGCGCG-GAGATG GACCGAA CATCTCACACGCG      TCCTATCAGAAGGGG  60 42
         gap 1634731 .. 1634760 - -12.9  -5.36441   CCCTCATATAAAAAA       GATGGCAGAAGGC CTCA GCCCTCCACCATC        TTCCGTCAATGCTTA 100 38
QR90_RS07840 1633470 .. 1633527 -  -5.7  -3.70902   GGTCCGAGAGTCAAA GGGTCTAAGGGTCT-G-GGCGCAAAGA TTCTTG TCTTTCAGCCCCTAGACCGTTGGACCC TTAGACAACCGTCAA  60 37
        tpiA 1632637 .. 1632664 - -10.6  -4.78149   TGGAGAACCCAAAAA        GGAGTGGGGTGGA TAT TTC-CCCCACTCC        TTCTTGAAACTTTCA 100 46
        cadA 1625418 .. 1625429 -  -3.6  -3.61178   CGGAGCCATGTTAAA                CCCC TCCC GAGG                 CGGGCAGCCCGGACG  51 9
QR90_RS07795 NONE
QR90_RS07790 NONE
QR90_RS07785 NONE
QR90_RS18340 1623707 .. 1623725 -  -4.5  -3.06183   GTGAGCTGGAGGTAA            CCGCC-CG CTGT CATGGCGG             CAATCAGGGCGCGCG  45 60
QR90_RS18335 NONE
QR90_RS07775 1621432 .. 1621459 -  -3.9  -3.26471   GGAGGTCCAGAGCAA        GCGCCTGCCGG CCCGTC CCGGCGTGAGC         GGCGGCTGGCCGGTC  47 231
         gmk NONE
QR90_RS07760 1619285 .. 1619314 -  -3.5  -3.05463   AGTGGGTTCAGGGAA       CATATG-GGCGCAT CCT AAGCGCCGCGCATG       AGCGTGGACTTTGAG  43 83
QR90_RS07755 1618421 .. 1618448 - -13.5  -3.46602   GGCCGGACAGCACAA        GAGATGGACGG TATGGC CCGTCCACCTC         GTTTCCAGATCTGAG  79 46
QR90_RS07750 1617533 .. 1617558 -   -14  -4.72272   CGTGCCCACGAAAAA         CTCCCCCGCG CCGGGC CGCAGGGGAG          AGATCCGTTTGGGGA 100 53
QR90_RS07745 NONE
QR90_RS07740 1616031 .. 1616065 -  -3.3  -3.61398   TGGCCGGGTGAACAA     TGTGACGGCCCCACC GGGCA GGCGGGGCCGAAAGC     CAGATTGACGAGAGG  51 62
QR90_RS07735 NONE
QR90_RS07730 NONE
QR90_RS07725 NONE
QR90_RS07720 1610722 .. 1610746 -  -5.6  -3.20858   TATCAGATCCATGAA         GC-GGCTGACC CCAT GGCCCGCCCGC          TGCCAAAGCTCAAGA  51 183
QR90_RS07710 1608636 .. 1608646 -  -2.4   -3.2048   GCCAAAGCTCACCAA                 CCGC TCA GCGT                 TTCCAGCGCCCCCGC  43 19
        mnmE 1607076 .. 1607113 -  -8.9  -3.84406   TCCTGAGGACAAGAA   GGGCCAGAGCGGCGCGC ACGG ACGCGCCGAATTGCCCC    GCCAGCCCGAGGACC  70 172
QR90_RS07685 NONE
QR90_RS07680 1602985 .. 1603007 - -12.7   -3.9712   TGACCGCACCAGAAA           GCCCCCTCC GCGCG GGAGAGGGC           CGGCAGGGATTTTTT  86 45
QR90_RS07660 1601181 .. 1601193 -  -6.2   -4.4009   GCGCAGGCCAGAAAA                GCCG GGCAG CGGC                GGCGCGTGCAGGAGA  75 120
QR90_RS07655 NONE
QR90_RS07625 NONE
QR90_RS07620 NONE
QR90_RS07615 1591781 .. 1591797 -  -6.5  -3.83502   GATGTCTACACGAAA              CAAACGG AAT CCGTATG              AGCGGTAGCGGCTGG  65 49
QR90_RS07600 1587448 .. 1587485 - -19.4   -4.3255   CGGGCAACCAAGAAA   GACAGGAAGGAGGC-TG CCTTT CACGCCTCCTTCCTGTC   CTTTGCCTGACTCAG 100 37
QR90_RS07595 NONE
QR90_RS07585 NONE
QR90_RS07580 NONE
QR90_RS07575 1584138 .. 1584152 -  -4.2  -3.18832   GAACGGTAGAAGACA               TTGGAC ATG GGCCAA               TCCTAGACTTGAAGC  47 68
QR90_RS07570 1582755 .. 1582767 -  -4.7  -3.59979   GCCGGGGACCGCAAA                CGCTG GAA CCGCG                CGCCCCGCCTGCTGC  54 111
QR90_RS07560 NONE
        bshC 1579307 .. 1579323 - -10.1  -3.30124   CGTGACCGGGCAGAA              CGGCCTG CAG CAGGCCA              AGAAGTTCCACGAGT  63 317
QR90_RS07520 1571013 .. 1571029 -    -5  -4.54727   GCGCCGAAACGAAAA              CTCCGC TGGCG GCGGCG              CTGGCGACAGCCTTT  75 513
QR90_RS07480 1563143 .. 1563159 -  -6.5  -3.50853   CGGCTTTAACGACAA              CCGCG CCGGCTT CGCGG              TGGCGTCCTACGATC  55 390
         rpe NONE
QR90_RS07460 1560641 .. 1560662 -  -3.6  -2.64243   GCATAGGGCAGAGTA           GC-GGGCGG ATATG CCGCCTAGC           CCGCGACGAATTTTA  39 21
QR90_RS07455 NONE
        nspC NONE
QR90_RS07445 1558311 .. 1558353 - -14.2  -3.54129   CACATTCCGTTCAAA GCAGACAGCCCCCG-ACTC CGTGGC GAGTGCGGGGGCGCTCTGC TGTTCAGGCTTCAGC  85 36
QR90_RS07425 NONE
QR90_RS17610 1553946 .. 1553983 -  -2.6  -3.36327   GCAGCGGACGCAGAA   CGTGCAGCGCCTGA TCCGATTCAC CCAGGCGCAACAGG    GCCGCCGCATGCGTC  45 39
QR90_RS07420 1553418 .. 1553430 -  -3.3  -2.79749   TACCTCGAACACAAT                CCTGG CCC CAAGG                TCTTTATTCGCCCGC  40 29
QR90_RS07395 1546761 .. 1546796 - -21.3  -3.16191   TCACAGCGGGAGGAA    GAGAGGCGCGCATCCC CACAC GGGATGCGCGCCTC-C    TTCGCCTGCTCCGGC 100 46
        ilvA 1539425 .. 1539437 -  -6.9  -3.60151   GCCCTGAAAGCATAA                CCGGC CAG ACCGG                GGCGTTTGGACTGTG  59 62
QR90_RS07360 1538181 .. 1538196 -  -8.2  -2.59742   CCCAATGCCGACAAT              GCCGCG CCTG CACGGC               TTTATTCAGCGGTCC  53 339
QR90_RS07340 1530385 .. 1530400 -  -2.4  -3.53091   AGCGGTCGGCCGAAA              GGCCGA GCAC CCGGTC               AGCGCATCAGGCCGG  47 24
         ffh 1528312 .. 1528354 -    -4  -2.75712   CGATTGAGCTAACGA CCCGCGCGCCATCACACCC GGCCAG GGGCGTTTTTGCA-GCGGG TGTGAGTATACGGAG  42 72
QR90_RS07325 1528216 .. 1528232 - -10.1  -4.58466   CCCACAACGAGAAAA              CTCCGCC AGA GACGGAG              TTGGTCTGGTGGGTC  95 32
QR90_RS07315 1525618 .. 1525673 -  -8.3  -3.27525   TGGCCGGAAATGGAA CCACGGTCTGAT-CCTTGCGCCCC TTTCCCTGG GGAACGGGAGGGATCAGGCCGTGG CGGCCTCCGCATCTG  60 67
QR90_RS07310 NONE
QR90_RS07305 NONE
QR90_RS07300 NONE
QR90_RS07295 NONE
QR90_RS07290 NONE
QR90_RS07285 NONE
QR90_RS07280 NONE
QR90_RS17165 1516149 .. 1516163 -  -2.8   -3.7282   GCAGTGCAGCAAGAA               TGCG GTGGGCG CGCA               GACGTACATGCGGAT  53 276
QR90_RS07240 1507344 .. 1507357 -  -3.8   -5.0538   CTGGACGTCAAAAAA               GCCA AGGGCA TGGC                GTTGCAGGCCAGCAA  82 443
QR90_RS07225 1503324 .. 1503335 -  -7.2  -5.24796   GGTAGACAAGAAAAA                CCGC CCCT GCGG                 GCGTCATCTGTGTAT 100 347
QR90_RS18330 1498791 .. 1498813 - -12.7  -5.04175   GCAATCACACAAAAA           GGCCAGAGC GCGGT GCCCTGGCC           TGACGTGAGGAGCGT 100 43
QR90_RS07200 1498127 .. 1498146 - -12.1  -4.74103   CCGGGAATGCAAAAA            CCGCCCC GATGTG GGGGCGG             CTGGAAAGGGGCCGG 100 45
QR90_RS07145 1487156 .. 1487172 - -13.7  -3.05816   TCAGGCGTCACCGAA              GCCACCG TGA CGGTGGC              CACCACGCCCGCCGC  69 405
QR90_RS07130 1482987 .. 1483034 - -23.6  -3.91897   GGGGCTAGGCAGAAA GAAGCCGTGGGGTATCAGGAGA ACGC TCTCCCAATCCCCCACGGCCTC CATCCGACTTTAAGG 100 42
        pckA 1481121 .. 1481153 - -17.1  -3.61398   TCTCCCGCCCAAGAA      GAAAAGTCCCCGCAC CTG ACGCGGGGACTCTTC      TTTGTTGTTGAAAAG 100 43
QR90_RS07105 1475309 .. 1475353 -  -7.9  -3.90291   ACGGGGGCAACGAAA GGGGAGGAAGAGG-GAGC-CA GATTG TGTGCCCTCCGCTTCCTCCCT TCCTGAATTGCCGAC  68 40
QR90_RS07065 1467450 .. 1467480 - -13.3  -3.59202   CACCTTCACAGAGAA      GGGGACGCCC-CGT ATAC AAGCGGGCGTCCCC       AGGTCACCTTGCGGT  77 61
QR90_RS07060 NONE
QR90_RS07055 1465346 .. 1465375 - -18.6  -3.83205   ACCGGTCAGACGAAA       GCCGCCTCGCCA TGCACC CGGCGAGGCGGC        TCTTGAAAATGTGGC 100 46
QR90_RS07045 1463560 .. 1463572 -  -7.7  -4.07568   GCCGGGCGCGCAAAA                GGTTC CCC GAACC                GCTGGAAGGCGCGGC  70 52
        rpoD 1461641 .. 1461666 - -12.5  -5.34555   CGACACCACAAAAAA         CCGCCCCAGAC CGGA GTCAGGGGCAG          CGTGGCAGGAGGTGT 100 44
QR90_RS07035 NONE
QR90_RS07030 1458802 .. 1458823 -    -3  -2.69151   GGGCGGCAGACAGCA           GACTCACCG GGCGG CGGC-AGTC           TCGGCCTGCGGCGGC  40 7
QR90_RS07025 1457665 .. 1457707 -  -9.1  -3.53811   TTCATCTTGGCGAAA GTCGTGCGGC-AGGCCGC-GA AGT TCAGCCGCCGAGCCGCAGGAC ACTCTGGTTGCCGCG  68 5
QR90_RS07020 1456988 .. 1457011 -  -2.2  -3.57263   ACGGTGACTTGCAAA          GCGTCCGCAG TTCG CGCCTGACGC           TAGAGGCGAACAGGC  50 342
QR90_RS06975 NONE
QR90_RS06965 1444106 .. 1444136 -    -4  -3.53224   CACCTGCGCCCGAAA      GTGCG-CGA-GGTC CACGT GACCATCGGCGCCC      ACCACTGGCATGACG  49 115
         lon 1440310 .. 1440331 - -13.7  -4.25104   GCCGTGCCATGAAAA           GACCCCCGC CGGG GCAGGGGTC            GATATGGACGGAGAG 100 46
QR90_RS06950 1439610 .. 1439642 - -17.1  -4.18762   AACTTCCACCCAAAA     GCGCGCCCGACTTC GATGGA GAAG-CGGGCGCGC      TTGTCATGGCCACGG 100 93
QR90_RS06940 1437727 .. 1437748 - -10.1  -5.63504   AACGGCACAAAAAAA           GCGCAGAGG ACCC CCTCCACGC            TGGTGCTTCGAATCG 100 49
QR90_RS06935 1437015 .. 1437045 -  -9.6  -2.96216   GGCGAGGAGGAGAGA       GGCTGAGGCCAGCG ACG CCCCAGACTCAGCC       GCGCCCGGCCAGCAC  58 20
QR90_RS06925 NONE
QR90_RS06920 1434970 .. 1434990 -  -3.2  -3.12351   GGGGTGGACATGGAA           CCT-CCTGG CACA CCGGGTAGG            GAAGACGGCATAGCT  44 104
QR90_RS06915 NONE
QR90_RS06910 NONE
QR90_RS06905 1431942 .. 1431956 -  -8.6  -3.65351   GGACTCCGATTGAAA               GGTGTT GAA AACACC               TGGAAATCCGAGCAG  65 102
QR90_RS06895 1429852 .. 1429876 -  -3.6  -4.62069   GGTGGACGTGAAAAA         GAACTTCAGTG TCCC CAC-GCAGTTC          AACACCTCCAACGCC  72 452
QR90_RS06875 1425980 .. 1426014 - -29.4  -4.19704   CAAGCGCAGTGAAAA     GCCCCCCTCCTGGCCA TCG CGGCCAGGAGGGGGGC     TTGCTGACTGATGGG 100 51
QR90_RS06870 1425572 .. 1425584 - -10.5  -3.14564   GTACCGCGCCAGCAA                GGGCG CGA CGCCC                GTGGTGGTGTACGCG  64 118
QR90_RS06825 NONE
QR90_RS06820 1418752 .. 1418782 -   -14  -4.19704   CAATCCTAGCCAAAA       CAGCGCGCAGGG GTTGAGT CCCTGCGCGCTC       GCCTGTGCCTGATTT  93 118
QR90_RS17600 1418133 .. 1418155 -  -9.8  -3.67498   GAAGGCGCAACACAA           CGAGGGGCTA CTT CAGCCCCTCT           TCGCTTTAGATACCC  70 429
QR90_RS06805 1416925 .. 1416941 -  -2.2  -3.55304   AGAGGCAACAAGCAA              CCCAGA CTGCC CCTGGA              CCATGAGCCTGACGC  50 187
QR90_RS06760 1401022 .. 1401045 -  -8.1  -2.54371   AAGCAGTTCAATCCA          GAGGCCAGC CGCTGC GCTGGCCTT           TTCTGCTGCCTCCAC  53 125
QR90_RS06690 1389937 .. 1389952 -  -4.6   -3.7046   CAAAAAAGCCTCAAA              GCGCCA CCGC CGACGC               CAGCAGATCCAGGTG  58 202
QR90_RS06675 1388242 .. 1388282 -  -3.8  -4.08767   GGTACCCGGTCAAAA CCGA-CGCCGCCCTGGTCA TCCG TGGCCGGGGCCGCGTTCCA  CGCTCCCATATCCCG  60 295
QR90_RS06605 NONE
QR90_RS06600 1379872 .. 1379886 -  -4.2  -5.00616   GGTCTCCTTAAAAAA               CCATGA CGC CCACGG               TCCGGGCGTGGTGAG  81 3
QR90_RS17575 NONE
QR90_RS17145 1377826 .. 1377853 -  -2.6  -3.01924   CACGGCTGCTGAAGA        TGCAACGGGG GTCGCCTT CGCCGTTGCC         GCGTTTGGCAGGAGG  41 132
QR90_RS17970 1377164 .. 1377174 -    -4  -2.73529   CTTTAGACAAAGGGA                 TGAT GTG ATCA                 AAAACTAAATCGTCT  42 120
QR90_RS06595 1375495 .. 1375517 - -17.8  -3.25223   GAGGCATAGCAGGAA           GGCCAGCATC CGT GATGCTGGCC           TCCGTGTCATCTCCC  91 204
QR90_RS06590 1373818 .. 1373846 - -13.1  -2.77701   AGCGCATGAACAGGA        TCGGGCACAGGTC AAA GACCTGTGCCGGG        AAGCACAAGAGATCA  63 367
QR90_RS06550 1366788 .. 1366801 -  -5.2  -3.18735   TCAAGAGTGGAGGAA               GCCC TCTGCT GGGC                TGCGCCGCCCTCAAC  48 36
QR90_RS06545 1366408 .. 1366428 - -10.4  -4.78107   GAGCACCACGAAAAA            CTCCCGGC GCATG ACCGGGAG            CAGGCAGAACGGAGA 100 48
QR90_RS06540 1364887 .. 1364899 -  -9.1  -3.25823   CCTGCTGGACAGCAA                GGCTG GCT CAGCC                GTCTTCTCGGAAACC  59 297
QR90_RS06520 1360130 .. 1360162 - -18.5  -3.84674   ACCCCACCATAAGAA     CGGGCCGCC-CCAG ATTGAA CTGGAGGCGGCCCG      CTGGGTTGGGAGATC 100 232
QR90_RS06490 1355134 .. 1355155 - -12.3  -4.74504   AGTGGAATGGAAAAA           CCCTTCCCA GCGT CGGGAAGGG            TTCTTCTGAGTCTCA 100 45
QR90_RS06475 1351650 .. 1351680 - -16.9  -3.83502   CAGGGGGAGACGAAA       GCGGCGTGCGG AGACAGGGA CCGCACGCCGC       TTTCTTGACGGCATC 100 92
QR90_RS06460 NONE
QR90_RS06455 1347034 .. 1347061 -    -4  -3.33696   CGCCTGCTCAAGGAA        CTGGAGGACGGCT TCG AGCCG-CACCCGG        CGCTGATGGATCTGC  47 313
QR90_RS06445 1345087 .. 1345117 - -11.2  -4.61824   GAAGAACAACGAAAA       TGGGGATGAGTG CATCTGT CTCTCATCCCCA       TTGCGAATCCGGGCG  95 237
QR90_RS06440 1343884 .. 1343909 - -17.5  -4.84017   AATGCTGCATAAAAA         GCCGCGCCTCC AATC GGGGGCGCGGC          TCTGAAAAGGCGAAC 100 52
QR90_RS06435 1342908 .. 1342938 - -19.8  -3.31144   CTTCTAGTTTTACAA       CCCCCCCTCTCC ACTGACA GGAGAGGGGGGG       GTTGTTACTGCGGCC  95 44
QR90_RS06410 1337422 .. 1337459 -    -6  -4.10657   GGACATCTTGCAAAA   GGGTCAGGCGGACCTG ATCGCG CTGGGCCGCCCGTTCC    TGGGCGATCCGCACT  69 386
QR90_RS06400 1335802 .. 1335816 -  -4.2  -3.92522   CGTGAAGTTGACAAA               CCGG TGCTGTC CCGG               TTTGTCAACGAAACA  58 60
        clpS NONE
QR90_RS06365 1328596 .. 1328613 -  -4.1  -3.51825   GGAGGGCAACGAGAA             TCGCC GTCGTTCA GGCGA              AACTGGTTGGTTTCG  51 85
QR90_RS06360 1327869 .. 1327904 - -21.3  -3.34013   CACTGGGCCAATGAA    GAAGGGAGCCAGACC TCTGCG GGCCTGGCTCCCTTC     TCCGATCTGGATCAG 100 37
QR90_RS06355 1326620 .. 1326666 -  -7.9  -3.10354   CAGACGGACGGAACA CCCGCCCGCAGACCGTTCCG CTTCCTGT CGGT-CAGTCCGCAGGCGTG TCGCTGCCCAGCCGC  54 10
QR90_RS06350 1325696 .. 1325708 -  -5.5  -2.64155   CTCCTGCGAAAGTCA                TGCCA CGC CGGCA                ATGGAGCGGTTGCAC  46 10
QR90_RS06345 1323938 .. 1323950 -  -4.8  -3.06183   GGCATGGGCAGCCAA                CAGC GGGAG GCTG                TCCACAGTGGTTCAC  47 74
QR90_RS06335 1322200 .. 1322214 -  -3.4  -3.57144   TGGCGGAGGGTTAAA               GGGTCA AAC CGTCCC               GCGTCCCTTCCTCAG  51 37
        lepB 1321215 .. 1321225 -  -2.4  -3.98214   ACGATGGACGACAAA                 GGGG CCT CCCT                 CATCCAACGCCTGGG  57 174
        metH NONE
QR90_RS06315 1316189 .. 1316218 -  -7.2  -3.19026   CACCGGAATAGGGAA      GAG-CCGGGCACAG AAAT CTG-GCCCAGTCTC       CGTAATCATAATGAT  56 78
QR90_RS06310 NONE
QR90_RS06305 1314012 .. 1314053 - -16.5  -3.24386   AAAAGTCAGCAGCAA CAGCATCGCCGCCGGAGCA ATGG CGCTCTGGCGGCGGTGTTG  TGGATCTGGTCACAG  86 49
QR90_RS06265 NONE
QR90_RS06260 NONE
QR90_RS06255 1301778 .. 1301810 -  -9.7  -2.64099   CCCGGTCAGCAGAAG      GGCCGCCAGCAGC GCTGTTA GCCGCACGCGGCC      AACCCCAGCCGACTG  56 10
QR90_RS06250 1300799 .. 1300824 -  -6.9  -3.59979   GTGGCGGACCTGAAA         CTGGGGTTGCGC GTG AC-CAACCCCAA         CGCCGTGCCCCTGAA  57 415
QR90_RS06240 1299465 .. 1299481 -  -5.1  -3.05596   GATTCCTTCACGGAA              TAAACGG AAT CCGTTTT              TCTCCTTCTCGCTCT  47 125
QR90_RS06235 1298608 .. 1298634 - -10.9  -4.96848   GCGGGCACACAAAAA        GAAGAGGC-CGC TCTC GCGCGCCCCTTC         TCCTGATTCAGCTCC 100 65
QR90_RS06230 NONE
QR90_RS06225 1296801 .. 1296828 - -15.6  -3.71378   GAGTCCACAGCGAAA        GCCCCCGCGTCCC TCA AGGA-GCGGGGGC        TTTCGCTGTGCAGGT  90 51
QR90_RS06215 NONE
QR90_RS06210 NONE
QR90_RS06205 1292412 .. 1292440 - -13.9  -3.84394   GAGATACAAGTCAAA       GGGCCGGA-CGC GTTATT GCGCTCCGGCCC        TTCTGAATATCGGGG  86 41
QR90_RS17570 1287870 .. 1287880 -  -4.6   -3.4252   CCTGATCGACGAGAA                 GGGC ATG ACCC                 GCGAAACGGCCTACG  52 224
QR90_RS06150 1281855 .. 1281883 -   -13  -3.65902   GCGATTGCAGGCAAA        CGCCCCCGCACC GTCAT GGGCCGGGGGCG        TTTTTCTGGCTGTGC  77 57
        mnmD NONE
QR90_RS06135 NONE
QR90_RS06130 1277777 .. 1277809 - -19.2  -3.73088   AGATGTCAGGAAGAA      CAGAGGCGGCCCTG CAAGT CAGGGCCGCCTCTT      GTGAGGTTGCTTTCT 100 45
         dxr NONE
QR90_RS06105 1272489 .. 1272523 -  -2.3  -3.59946   CTCCGAAGGAGAGAA    TGGAGGCATCAGAA GTCTTCTT TTCTGATGC-TGCA     ATTCGGACAACTGCC  49 41
QR90_RS06100 1271379 .. 1271407 - -18.9  -4.16279   GATAGGACGCGAAAA        GTGGCGCCCGG AATTAGA CCGGGCGCCAC        TCTGGAAGATCTCTT 100 46
QR90_RS06090 1269762 .. 1269784 - -12.6  -3.18681   CGGCAAGGCCAGCAA           CGCGGGCGGC GTG GCCACCAGCG           GCCTGGAGATGAGCC  68 257
QR90_RS06065 1265115 .. 1265143 -  -6.6  -3.67597   CCGGTGACCGAAGAA       CCCTACGCCGACG CCTG CGCCG-CGCTGGG        CCTGAGCATCGATGA  57 474
QR90_RS17565 NONE
QR90_RS06055 NONE
QR90_RS06050 1262169 .. 1262222 - -12.5  -2.62184   GGCCCCGGCACAGCA CT-CCCGGCGACGACACCGCCCCCT GCTCTG AGGGGACGGTGTT-CCGGCGGGCAG CTCAGCTGGAGCGGT  67 59
QR90_RS06040 1259255 .. 1259276 -  -6.5  -3.10343   ACAGTCAGGACGCAA           GAGGCGCGGC TCG GCCCCG-CTC           AGCAGGGGCGGCCTC  51 167
QR90_RS06035 1258124 .. 1258166 - -14.6  -2.87132   CCCCCCGGTCAGACA GGGCGGGCGCCCCGGCCCGC AAA GGGAACTGGGGCGCCCGCAT CTCCGGTCCGCCGTC  77 80
QR90_RS06030 1257859 .. 1257882 - -13.8  -5.20333   CAGCGACAAGAAAAA          GCCCCCGGCA TTTC TGCGGGGGGC           CTGTCCTGATTTGTG 100 44
        dnaX 1255024 .. 1255036 -  -9.1  -3.36273   CGCGGGCAAGATGAA                CCGCA GCG TGCGG                GACACGGGCGGCGGC  63 277
QR90_RS06000 1252334 .. 1252372 - -26.2  -4.03234   CTGTCCCCACAGAAA   GGAGGCGGGCGGATGA GTCGATG TCATCCGCCCGCCTCC   ATCGTGGTGCTCTGG 100 42
        galE NONE
QR90_RS05990 1249673 .. 1249699 - -15.9  -4.76041   GACAGGCACGAAAAA         TCCCCCGAAGG GGACT CCTCCGGGGGA         CTGGGCGGCCACAAT 100 220
QR90_RS05985 1248024 .. 1248034 -  -6.8   -3.6682   GGGCAGTGAGGCAAA                 GTGC GGC GCAC                 CGTCTCTGTTCAGAT  59 35
QR90_RS05980 1247549 .. 1247561 -  -6.3  -4.18494   GACTCCGATTGAAAA                GTGTT GAA AACAC                CTGGAAATCCGAGCA  69 129
QR90_RS05975 1247112 .. 1247128 -  -2.2  -3.58343   GGGAGGAGTGGGAAA              TGCCCA GAGCG TGGTCA              GGGGAGGGCTGCGGA  49 23
QR90_RS05970 NONE
QR90_RS05965 1244257 .. 1244275 -  -5.2  -3.30124   GCTCACGCTGCACAA             CATCAACC GCT GGCTGGTG             GTGCTGGCGGGCGTG  49 431
QR90_RS05955 1242350 .. 1242364 -  -2.8  -4.09628   GAGCTCAAACAAGAA               GTGG GGTTGAA CCAC               TTTGAAGGCCGAAGC  58 423
QR90_RS05920 1234920 .. 1234958 -  -2.3  -3.87551   AGGATGAAACCGAAA  TCCGCATCCTCCTGACCA GCCG CGAGCAGGAGG-TGCTGC   GCCTGATCGCTGGGG  56 202
QR90_RS05890 NONE
        thpR NONE
        recA 1227039 .. 1227065 - -14.4  -3.41602   TGCACGGCACGAGAA         CGCCCCGGCC AGATAAA AGCCGGGGCG         TTCTTTTGTGCGCGG  83 178
QR90_RS05855 1221702 .. 1221744 - -22.2  -2.52676   CAGGCGCGGAAGGCA GCAGAAAGGGGGCAAAGTCA GTT CGACTTTGCCCCCTTTCCTC GGTTTGCGCTTAGCT 100 35
        trxA 1215150 .. 1215171 - -10.9  -4.87626   CTGGAAGAGCAAAAA           GCCACCCGCA ACC TG-GGGTGGC           TTTCGCTGGAATGTG 100 45
        gyrA 1209678 .. 1209707 - -10.7  -3.88498   CCCGGAGAGATGAAA       CGGCGTCCGAGGCC AGA AACCCCGGACGC-G       TGTTCTACCGTCTCT  79 83
QR90_RS05785 1208701 .. 1208728 -   -17   -5.0916   TTTGGAATAGAAAAA        CGCCGCCCGGAA TTTA TTCGGGGCGGCG         CAGAGGAAAGGGGGC 100 41
QR90_RS05780 NONE
QR90_RS05775 NONE
QR90_RS05770 1207060 .. 1207099 -  -2.8  -2.70932   CCCCCCCTGCAACCA TGC-TCC-CCGCTCACCC CCGCTT GCGCGTGCGGCGGATGCA  CGAACCCCCCCCACG  40 140
        truB 1203741 .. 1203754 -  -4.5  -5.24799   CGAGAAAGAGAAAAA               CATCC CTCC GGACG                TGGAGTGTAGGAACC  88 91
QR90_RS05740 NONE
QR90_RS05735 1200180 .. 1200231 - -14.2  -3.64866   ACACGACAGTTCAAA CGGGAGGAGCGGCTGGTCAGGCGG CAAT CCTCCCGGCCATCCGCTCCCGCTG TTCGGCTGGGCTGAA  85 44
QR90_RS05730 NONE
QR90_RS05725 NONE
QR90_RS05720 NONE
QR90_RS05715 1195197 .. 1195209 -  -2.6  -2.71712   CGCGCGTGGGGAAAC                GCCG TCCCT CAGC                CCTCGTCGGGCAGAT  39 21
QR90_RS05710 1194228 .. 1194248 -  -8.9  -4.09554   ATTAAGAAAAGATAA            CGGGACGAC ATA GGCGTCCCA            GATGAACACATCGGC  73 266
QR90_RS05705 1192815 .. 1192836 -  -5.1  -2.64274   ACCGGGTGAAAGGGA           GACGGGA AAGGGTCA TCCCGCC            ATGCTAGAGCAAGAC  43 102
        rbfA NONE
QR90_RS05695 1191649 .. 1191671 -  -4.7  -3.05844   GTGTTGATGTGAAGA           GCGGCGAGG ACGTG CGTCGCCTC           TCGGCGTGGCGCGAT  46 467
        rnhA NONE
        yqeK 1189008 .. 1189022 -  -5.6  -3.21276   TCGGCGTGGACAATA               GGCCCA TGC TGCGCC               CTGCCCCTGCCCTGA  47 410
QR90_RS05665 NONE
QR90_RS05660 1185967 .. 1186021 - -20.7  -4.62471   CTGAAGCTTCAAAAA GGGGCGGGAAGCGGGC-GCAGGCAGA AGCC TTTTCCTGCCGCCCACCACCCGCCCC TTGCCTCTTACTTGG 100 33
QR90_RS05655 NONE
QR90_RS05650 NONE
QR90_RS05645 1181931 .. 1181972 - -13.7  -3.08934   GGAGAGACGGCAAGA CGGGGGCGGGCACCAGGG TTCACGG CCCCA-CGCCCACCCCCG CCGGCCGCCGCGCCT  75 3
QR90_RS05640 1180621 .. 1180631 -  -8.2  -2.80935   ACCCCACCTACCACA                 GCCG CTC CGGC                 AGATGATCGCGGTGG  54 7
QR90_RS05635 NONE
QR90_RS05630 NONE
QR90_RS05625 NONE
QR90_RS16650 1176379 .. 1176408 -  -5.6  -3.87815   CCCTACGTCGAGAAA       CTGATCACCACC GCCAAG GGCGGCGACCTG        CACGCCCGCCGTCTG  60 279
        gltX 1143909 .. 1143946 -  -7.8  -3.85165   TATGGGAAATGGAAA  GGCG-ATCAAGGCCGATC CCCT GAT-GGCCCTGAGACGCC   ACGATCCTGCGCCAC  68 106
QR90_RS05400 NONE
QR90_RS05395 1141271 .. 1141298 - -14.9  -3.93695   CCGACCACGCACAAA        GGCGGCCAGAC GAAATG GTCTGACCGCC         TCTGGAGGGATGGAA  89 44
QR90_RS05390 NONE
QR90_RS05385 1139106 .. 1139133 -  -5.4  -3.03124   CCTGAGTCTGGAACA        GGCCTACGTGCT GTCC AGCGCGTGCGCC         GACCTCAAGATCAGT  46 154
        murF 1136794 .. 1136809 -  -3.2  -2.66316   GGGTGGAGGACATCA              CCGTGCC GCT GGC-CGA              GTTCTGTGCCGCCAA  40 125
QR90_RS05365 1135440 .. 1135468 - -12.3  -4.13014   CTGACACCGCCAAAA        GCCAGCCTGGACC GGC GGCCCTGGCTGGG        CGCCCAGGGCTGTTT  86 242
        pilM NONE
QR90_RS05355 NONE
        pilO NONE
QR90_RS05345 NONE
QR90_RS05340 1129008 .. 1129030 - -19.2   -4.7497   GGGAGCCATCAAAAA           CCCCCTCCTG GTG CAGGAGGGGG           GACAGGCGCCAGTGG 100 46
        aroC 1127627 .. 1127642 -  -3.9  -4.25056   GAGCGGAGTAACAAA              GGCAC GGTCTG GCGCC               TCAGTCGGGGTTGCC  66 152
QR90_RS05330 NONE
        aroB 1125900 .. 1125911 -  -5.8  -2.53089   GACAAACCTAAAACT                GTGG TTCT CCAC                 TTGAACATACGGTCC  45 66
QR90_RS05320 1125109 .. 1125130 -  -6.5  -2.59564   GGGGCAGGGGAGAAG           GCTCAGCGA GAAG CCGCTGAGG            GCAGTCGGGGCGCAG  48 44
QR90_RS05315 NONE
        aroQ NONE
QR90_RS05305 1122727 .. 1122749 -  -7.6  -3.50929   GAAAGCATAGGAGAA           CCTCTGACCG GAC CAGCCAGGGG           GCGCTCATACGGATT  60 168
QR90_RS05300 NONE
QR90_RS05295 1120919 .. 1120953 - -17.3  -2.73483   AGGGGAGTCTAAGTA     CCTTGAACCGGAAGC TCTCC ACTCCCGGTTCAAGG     TACTTTTTCGCCACT  84 80
        glgX 1118483 .. 1118526 -   -11  -4.53303   CACCGTGAGAGAAAA GCGAAGGGACGCCC-ACGC ATCACTG GCGTCAGGCGTCCCTGTGC TGTCCGGAAAAAACT  95 51
        treZ NONE
        treY 1113621 .. 1113649 -   -16  -5.42198   GCTGAAAAAAGAAAA        GGGCGGCGCG TGTGTGGTG CGCGCCGCCC        GTCTGTGATCTGTGT 100 41
QR90_RS05240 1103520 .. 1103557 -   -17  -4.12456   ACATCAGGCTGAAAA   GTCAGAGGGGGCAGCC GATGCT GGCTGCCCCCTCTCGC    AATCCGTTTACTTCA 100 33
QR90_RS05225 1099510 .. 1099526 -  -4.4  -3.76224   GGCTGAGTCATGAAA             CGCTCCT TGGC AGG-GCG              AAGACGCCTGTCTGT  56 240
QR90_RS05220 NONE
QR90_RS05215 NONE
QR90_RS05210 NONE
QR90_RS05205 1095764 .. 1095774 -  -3.2  -3.06831   TGAATCTTCATGGAA                 CCTC CTG GAGA                 GACGGCGAATAAATT  43 107
QR90_RS05200 NONE
QR90_RS05195 NONE
QR90_RS17125 1091332 .. 1091348 -  -2.3  -4.07568   TGGTTCTCCTTAAAA              CTATTTG ATA CAAATAT              TGGCGAATTGCATGC  57 9
QR90_RS05190 1090080 .. 1090097 - -10.5  -5.02074   CCACGGCTGAAAAAA             GGCGGCC CGGA AGCCGCC              CGTCTCAAGAGGGAT 100 40
QR90_RS05185 1089510 .. 1089527 -  -3.3  -2.58544   GGCCACGCTCAGAAG             CCGC-GCC TAT GGCCGTGG             GCCTGCACGCCGAAG  39 1
QR90_RS05180 1089089 .. 1089130 - -12.9  -3.79747   GCACGGACGAGGAAA TCCGCGCCGCCGTGGAGGTC ATG AACC-CCATCGCGGCGCGGG GGGACCAGCCCGGCG  78 168
QR90_RS17555 1086161 .. 1086209 -  -5.9  -3.91473   AGAAAGTTTGAGAAA GCGAGATTGCGGGGACAGGAGGC GGACG GCTTCCTG-CCCCGCG-CCCCGT TCACCGCTTCTGTTC  62 26
QR90_RS05150 1082237 .. 1082253 -  -4.3  -3.05384   TTGCTTTTGACCGAA              CGGACTG GCA CAGCTCG              CAGAGAGTGAGTGGA  45 241
QR90_RS05140 1078918 .. 1078947 -  -8.5  -3.57263   AGTGGTACCCGGAAA       CCGCGCGCGTGATG ATG CTTCAGG-GCGCGG       ATTTCCTGCTGTACC  63 503
QR90_RS05115 1074894 .. 1074910 - -12.3  -5.21709   CTGGACAGCAAAAAA              CCCTCCT GGA AGGAGGG              CTGATGAGCTGACTG 100 86
QR90_RS05110 NONE
QR90_RS05105 NONE
QR90_RS05100 NONE
QR90_RS05095 1068569 .. 1068581 -  -2.6  -3.53224   GAGCGTGGCCGGAAA                GGAG AACTG CCCC                ACCTACCCCATCTCC  47 28
QR90_RS05090 1068206 .. 1068216 -  -6.8  -3.61398   CGGTGGGTTGAAGAA                 GGGT CCT ACCC                 TGCGGGGAAGCGCAG  59 129
        apaG 1042084 .. 1042094 -  -4.6  -2.73124   CCGTACGCTGGAAAG                 CGCC TGG GACG                 GGACAGCGGTGCAGG  43 280
QR90_RS05000 NONE
QR90_RS04995 1038292 .. 1038308 - -10.8  -3.01712   CGCTCTGGCCCAATA              CCCCGC TTAGT GCGGGG              GTTCTGCTTGTGCTT  66 270
QR90_RS04975 1031880 .. 1031894 -    -7  -2.78935   AGACCGGTCAGGAGA               CAGCGG CCC CCGCAG               GCCGCACCCGGACCC  49 3
QR90_RS04925 1019095 .. 1019106 -  -5.8  -3.39732   CAAGGACTGGAAATA                TGCC GTAT GGCA                 TGACGAATTGGGAAA  55 330
QR90_RS18095 NONE
QR90_RS04880 1009475 .. 1009495 - -18.3  -3.15579   GCAATCTCTCAGCAA            GCAGCGCGG TTA CCGCGCTGC            AGACCGGACTACAGC  86 463
QR90_RS18160 1007408 .. 1007436 -  -3.2  -4.70879   TCCAAACGGGAAAAA       TCCCCC--TTCTTG CCG CAGGAATAGGGGGA       CGTAGTGGATTTTTG  73 92
QR90_RS16625 1004434 .. 1004453 -  -3.4   -3.9344   AAGCGCAAGATCAAA            GGTCTTCG GGTG CGAGGGCC             AGCAGGATTTTTCGC  56 1
QR90_RS17540 1003845 .. 1003872 -    -9  -2.71011   ATCTCTCTCCAAGGA        GGCGGCCAGAGC GCAT GCCCTGGCCGTG         TTGTTTTATTTGGCG  57 31
QR90_RS04850 1002665 .. 1002676 -  -3.6  -3.19175   GGCGAAGAGATTCAA                GACC TTAT GGCC                 GATATGGGCCATGCC  45 432
       bshB1  999686 ..  999732 -  -3.5  -3.53012   CTGCTGGCGGGCAAA CGGCTGCTGATCGGCGCCCTGC GGGA ACTGGACCCCGA-CATCTACCG GGTGCCGCTGGCCCG  49 478
QR90_RS04815  996335 ..  996354 -  -9.2  -4.72986   CAGGGGCAGCAAAAA            GCCCCAGC CGAA GCCAGGGC             TTGTCCACTCGTCCT  93 46
QR90_RS04800 NONE
QR90_RS04795  992196 ..  992233 - -13.6   -4.1466   ACTGAACGTTGAAAA   GGTCAGCCGCAAAG-AT GTTCA ATGCTTTGCGGCTGGCC   TTTGCTGGGCCGGGG  93 49
QR90_RS04785  990260 ..  990282 -  -5.4  -3.78934   CCCCGCCGACAAGAA           TGGCGTGGCC TAT GGCCGCAGCA           CCCGCGAGGTGCTAA  58 219
QR90_RS04770  988898 ..  988922 -  -4.3  -3.47349   GCCTCAAAGGGAGAA          CCGGACA TCAGGTGTCAC TGTCCGG          ACCGTGTTCCCAGCC  51 8
QR90_RS04765 NONE
         cax NONE
QR90_RS04755  985497 ..  985522 - -12.5  -3.65353   GCAAAGTATGGCAAA         GCGGGCGGAGA CGAA TGCCCGCCCGC          CGCTATCGCTGAAGG  77 42
QR90_RS04750 NONE
QR90_RS04740 NONE
        holA  981762 ..  981780 -  -2.4  -2.71924   GAGGGTGGGGCAAAT             TAGACTCG GTT CAATTCTA             CCAGTTCGCTGCGGC  39 116
QR90_RS04730  980534 ..  980565 - -18.1  -4.37886   GGACCGGCGATAAAA      CAGCCCCCTCCGCC GGACA GG-GGAGGGGGCTG      GCGGGGGCGGCGCTA 100 38
QR90_RS04705  976854 ..  976890 - -11.6  -2.79915   AGGTAGGTCACCAGA   CGGCTGATGGCGGCGGT GGGA ACCTCGGCCATCAGC-G    CACCCGGAAGTGGTC  66 20
QR90_RS04700 NONE
QR90_RS17530  975402 ..  975437 - -13.2  -5.63517   TTCTGAAATAAAAAA    GGGAGGGTGGAGGCTG ATTG CGGCCTCCACCCTACT     TTTTTAAATCTTTCG 100 65
QR90_RS04670  967024 ..  967046 -    -9  -2.60194   AGGCTTCGAACCAAT           TGGGGAGGAC ACC GTCCGCCCCT           GGGTCTAATGGCCGA  56 265
QR90_RS04635  961359 ..  961399 -  -8.2  -2.83409   GAGGAACGCACCAGA CCCGCCAGCGGCGCAGAGG CGGT CATGTG-GCGGCTAGCGGG  CGCGTAACGTCGCCT  55 18
QR90_RS04630  960254 ..  960268 -  -2.7  -3.72695   AGGTGGGCGAGGAAA               CGCGG CAGGC CCGTG               GGCAGGTGTGGCTCG  53 515
QR90_RS04590  949728 ..  949738 -  -3.2  -3.53343   AACTGTCCCTGGAAA                 GACG ACT CATC                 AATCAATGGTTGTCC  49 132
QR90_RS04585  947352 ..  947380 - -17.5  -2.69151   GGCCCGGACAGACGA        GAAGCCCCGCC ACACTTG GGCGGGGCTTC        CACGCAGAACGCGCG  84 44
QR90_RS04555  941479 ..  941505 - -13.7  -5.52347   AAGAAAAGCAAAAAA         GAAGGCGGCCC ACACG GGACCGCCCTC         CGCCGAGAGGAAGAG 100 44
QR90_RS04550 NONE
QR90_RS04545 NONE
QR90_RS04540  938692 ..  938706 -  -2.1  -2.86492   CCAGACTCACGAAAT              GATGGC CTCG GCC-TC               GATTTCCACCAGATG  40 2
QR90_RS04535 NONE
QR90_RS04530  936879 ..  936906 -    -9  -3.04322   CGGAACTGGTCAACA        TCCGCCCGGCCC TGCA GGAGCTGGCGGA         CGGGGGAGAGGAATA  60 73
QR90_RS04520 NONE
QR90_RS04515  934798 ..  934810 -  -5.5  -3.53091   ATCTGGCCGCCGAAA                TCGGC ATT ACCGA                GGCCAACCTCTCGCT  55 131
QR90_RS04500  933429 ..  933446 -  -6.9  -3.53012   CGCGTGGGCTGGAAA             CGGCTGG AAGC CCAGCAG              TACAGCTTTGCCGTG  55 93
QR90_RS04480  930418 ..  930457 - -15.7  -4.46854   GGACTGAACAACAAA  GCGAGAAGCAGGAGGGG AGTACG CGCCGCCCGCTTCTCGC   TGGATGAACTACGCC 100 34
QR90_RS04440  922464 ..  922486 - -11.3  -3.85879   CATAAGCCATAAGAA           GGGCCAGTT CAACC AACCGGCCC           TTTTCGTGCGTGTCG  79 245
QR90_RS04425  920815 ..  920838 -  -5.8  -3.37028   AGCAACAGTTCACAA          GCGCGGCGTC AGAT GCCGCCAGGC           TTGCAGGCAGCGCGT  52 73
        hemC NONE
QR90_RS04400  916378 ..  916409 -  -4.2  -3.04144   CCGTCAGCTGGAATA      CGTGGACGCCGCCCG AGG CCTG-GGCGCCCGCG      ACATGCGGATGATCC  43 409
QR90_RS04380  911341 ..  911379 -  -7.2  -3.79623   AAAAATGCCACGAAA   GTCGGCACCGTGCAGGAA GTG CTGCTGCGCGGCGACGCC   CACAGCGAGGGCTTT  64 513
QR90_RS04370 NONE
        csaB  907061 ..  907088 - -11.4  -3.26319   AACGTGGCATAGCAA        GGAGACCAGCATC CCT GATG-TGGCCTCC        ACGTCTCCACCTCCC  69 65
QR90_RS17070 NONE
QR90_RS04355  904440 ..  904450 -  -2.4  -3.41051   CGATGGGGAGGAGAA                 CGCC CAG GGCC                 AACACCTTCCCGGAC  47 453
QR90_RS04340 NONE
        scpA NONE
QR90_RS04330  899653 ..  899673 - -11.8  -4.17417   TCAATCATAGAGAAA            GCCCCACC TCTGC GGCGGGGC            TGGGGGTGGGATGGG  86 45
        meaB  898683 ..  898696 -  -5.9  -3.68351   CGGGCATCACCGAAA               CGGGC CTCA ACCCG                CCGTGAGCGCGGCCA  60 18
QR90_RS04315  897603 ..  897624 - -10.1  -5.63517   CGGGCAAAGAAAAAA           GGCGACAGA TCGC TCCGCCGCC            TCTTGTTGTGCGTGG 100 43
QR90_RS04310 NONE
QR90_RS04305  895313 ..  895346 -  -8.8  -5.07486   CAGTCTCAACAAAAA     CCCCCGCTCGTCACC CTTGC GGTCACT-GCGGGGG     CGGGAAGATCAGGCC  93 45
QR90_RS04295  892093 ..  892103 -  -8.2  -3.16881   CACCTATTCCAGCAA                 CGCC TTC GGCG                 TGGGTGCGGGCGCGA  56 276
QR90_RS04285 NONE
QR90_RS04280  889604 ..  889648 - -33.7  -3.66803   GTTCAAGACGGCAAA CCGGCCTGGCCGCCCCCCATT CCG AAGAGGGGGCGGCCAGGCCGG TGACGTTCCGAGGAC 100 51
QR90_RS04275  889272 ..  889291 -  -2.1  -3.92869   GCAGGGAGGCACAAA            GCAGGCT GGGGGA AACCTAC             AGCAGCGACGGTCCC  54 22
QR90_RS04270 NONE
        radA  887470 ..  887512 -  -2.5  -3.16068   TTTGGAATTCAAAAG GGGTGGCGG-CTGTTCGGGA GGCG TCCCGTCAAGACCGCCACAG GCCCCTATCGTCTGG  43 56
QR90_RS04260 NONE
QR90_RS04255  886442 ..  886464 -   -12  -3.18264   TCGCGTATGGATCAA           CCCAGCGG CGCTTTC CCGCTGGG           TTAAGGAATGAAGCG  70 50
QR90_RS04250 NONE
QR90_RS04245  885508 ..  885553 -  -6.1  -2.52623   TGTGCCCGACAACAG CGTGCTGAACGTGGAGT-ACCG GGA CGGTCACTTCGTGTTCGACACG GGCGTGCTGAACTAG  45 127
QR90_RS04235  881767 ..  881815 - -18.2  -3.54424   TTGCAGTTCCTCAAA TGACCGAGAGGGCCATGCAGAA TCTTT CTCTGCATGGCCCTCTCGGGGT CTATGGGGCGGCGGG 100 60
QR90_RS04215 NONE
QR90_RS04210  878125 ..  878137 -  -6.2  -2.63596   CCTCAGCTTAGACCA                GCCG TGACC CGGC                CAGACTTGCGGCTTC  46 39
QR90_RS04205  877468 ..  877507 - -17.1  -3.62275   ATTGACGAGTGCAAA  GGAAGGGGCGGCCACCG CAATTC CGGTGGCCGCCCCCTGT   GAATCTCGGCTGAAC 100 53
QR90_RS04200 NONE
QR90_RS04195  875221 ..  875238 -  -3.3  -3.85698   GGTGCCGCCGATAAA             CAGGACG TTCA CGCCCTT              TCGCCCGGCTGGTCC  56 16
QR90_RS04190  873987 ..  874030 -  -4.4  -3.61764   TCACCAACCTGGAAA GCCGCAAGGCCT-ACGCTGCC AGC GGCACCTTCAAGCGCAGCGGC AACGGCGGCGCGCTG  51 235
QR90_RS04170 NONE
QR90_RS04165  870295 ..  870325 -  -3.9   -3.7941   GACGCGGCACAAGAA      TGGGGAAGAAGGCC CGCA AGCCCCCT-CCCCG       TCGCAAATCCCCCGG  56 47
QR90_RS04160  869632 ..  869648 -    -3    -3.695   GGTCAAAAGCAAATA              GCACTT TTGAC AAATGC              TCTAGAAGCGGTACG  54 27
QR90_RS04155  868293 ..  868305 -  -3.4  -3.59262   TGGGACAGCCGGAAA                CTGA AGTTG TCAG                CTACTGAGCAGGGTC  51 22
QR90_RS04145  865487 ..  865508 -  -7.9  -2.58544   GGTCACCGGGAGAAG           TCCGCGCCG GAAC CTGCGCGAA            AATTGAGATGCCCGG  51 277
        murG NONE
        murC NONE
QR90_RS04130 NONE
QR90_RS04125 NONE
        ftsA  859753 ..  859790 -  -2.6  -3.86346   GGAGGGGGGCATAAA   GGAAGGCGAGAACCGA AACGAA TCAGCTCTCACGCGCC    TCTATTGCCCCTGCG  54 46
        ftsZ  858512 ..  858534 - -12.7  -3.39844   GGCACATCCGAAAGA           GGCCAGAGC GAATT GCCCTGGCC           TGCTCACGAACGGGT  76 46
QR90_RS04095  854494 ..  854532 - -31.9  -3.72576   GCCTGCCGGATCAAA   GGAGGGGAGGCCACGGC GATTT GCCGTGGCCTCCCCTCC   TTTCACGCTGACGTC 100 44
QR90_RS04085  851247 ..  851268 -    -3  -3.73414   CATATCATACGGAAA           CGCCCATTG TTGAC CAA-GAGCG           TCTGGAGGAATTTAC  54 190
QR90_RS04055  845095 ..  845139 - -19.4  -4.17109   AAGAAGTAAATCAAA GCAGGTGAACGCCCCTTCCA ATGTA CGGAAGGGGCGTTCACATGA CCTTCCGCTACAGCA 100 33
QR90_RS04020 NONE
QR90_RS04015  836256 ..  836285 -  -4.9  -2.57931   GGCAGCCGGCAGAAC       CCTGCTGGCCC CTGGCGTC AGGCCAGCCAG        CCGCCCCCGCTCCCT  43 40
QR90_RS04010  835083 ..  835123 -  -6.1  -2.78463   ATGTTCTTCAGGATA GGCCGCGTG-GGGCCA TTTCGCGTCC TGCCCCACAAGCGGCC  CGGTTGCTGCCTGAT  46 97
        pdxY  834113 ..  834124 -  -2.2  -5.06451   GACGACCTCAAAAAA                CCGT TGGG ACGA                 TGCTGAAATGACCTG  77 65
QR90_RS04000  833351 ..  833378 -   -17  -4.46212   GGGGCGACCACAAAA        CGTCCCCCCCGC AGAT GCAGGAGGGACG         TTTCGCGGTGAGGAC 100 44
QR90_RS03995  831467 ..  831484 -  -4.8  -2.87683   AGAGGTTCTTAGAGA             CGCGTC AGGTTG GACACG              AGGATCAACAGGGAA  46 78
QR90_RS03990 NONE
        ispH NONE
QR90_RS03980 NONE
QR90_RS03975 NONE
QR90_RS03970  826951 ..  826967 - -10.1  -3.19157   CATCAAGCTGACCAA              TCCGGCC ACC GGCCAGA              CCACCACCGTGTCCA  60 311
QR90_RS03945 NONE
QR90_RS03940  820941 ..  820979 -  -6.8  -3.91911   TGGATGCCAATGAAA  GAAGCCCA-TCCGAC ACCATTTCTG GACGGACTGGGCTTC   TGGAGCTACATCCTG  65 75
QR90_RS03935  819953 ..  819964 -  -4.4  -3.65314   GTGAAGTCGTAACAA                GGTA ACTG TACC                 GGAAGGTGCGGTTGG  51 176
        ruvB  815098 ..  815119 -  -7.3  -3.18264   GCGGCGATGGACGAA           CATCCGG TGGGGTTC CCGGATG            TTCGGGAATCAGAGC  56 50
QR90_RS03910 NONE
QR90_RS03905 NONE
QR90_RS03900 NONE
QR90_RS03895  811651 ..  811661 -  -5.4  -3.53091   ACCCGTTTTTGCAAA                 CGAT TCA ATCG                 GAATCTGTATTACCA  53 35
        uraD NONE
        pucL NONE
        uraH NONE
QR90_RS03860  805098 ..  805116 -  -4.5  -3.13403   CCCTTTGCATCAATA             GCTGACC AGCGG GACCAGC             ACCTTCAGCGTCGCC  47 1
QR90_RS03855  802752 ..  802765 -  -2.3  -3.88498   TTCTGACAGACGAAA               CTCTC GAGT GGGAG                CTCTTTTGACACGTC  54 139
QR90_RS18150  801547 ..  801601 -  -4.1  -3.85698   GCGCTGGGCGAGAAA GC-CGCCCTGTACCCGCCCGAG GACAGCGTGAAG CACGCGCGGGTGCTGGACGCGC TGTTCGCGGCGGCGC  58 104
QR90_RS03830  797959 ..  797977 -    -3  -3.00923   CCGCAACACTATACA             CCTGTCTG GGC CAGATTGG             GAAGGTGGGTCAGGC  43 53
        rpmE  797637 ..  797663 - -15.1  -4.46112   CGTGAGCCAAAGAAA         CGCGCCCCACC ACAGG GGCAGGGCGCG         TTGCGAAGCGTCGGG 100 42
QR90_RS03820  796873 ..  796899 - -10.9  -2.76815   ACGGCGGTCAAGAAG         GGGAGAGGC GTGCATTCG GCCTCTCCC         TTTCACGTCTGTGGT  63 40
QR90_RS03805  793797 ..  793807 -  -2.4  -3.57462   TATTTTAGCCTGAAA                 GCCC GCT GGGG                 GGGTCACGTTCTGGA  49 129
QR90_RS03800  792014 ..  792043 - -13.6  -4.18197   ACTTTGCACTGAAAA       TCCCCCTCCACC ACGCCG GGCAGAGGGGGA        TTCTCATGGTTCGGG  93 193
QR90_RS03785 NONE
QR90_RS03780  788334 ..  788358 - -13.6  -5.21709   GGCCAGATCAAAAAA          CAGCCCACCA TTGCG CGGTGGGCTG          TGGTCAGAGCTGGGT 100 71
QR90_RS03775  787516 ..  787536 -  -7.6  -2.62616   GGAGCTGTTAGACCA           GCGT-CAGC TGAT GCTGGACGC            CGGGGCCAGCAGCGC  48 389
QR90_RS03760 NONE
QR90_RS03755  781801 ..  781823 -  -6.9  -2.62184   GCGCGGGCGACATGA          CGGCGGC-GG CGGC CCAGGCGCCG           GTCAACGGCGAGTCG  45 397
QR90_RS03730 NONE
QR90_RS03725  776186 ..  776215 - -12.7  -2.61264   TTTCTGACCCAGAAG       GGCGGCCACGACG TGGG CAGCGAGGCCGCC        ACCCGCGACTTCCGC  62 138
QR90_RS03715  773393 ..  773416 -  -5.9  -3.58343   CCCATGACCCTCAAA          CGAGGGTGC CGAATT ACACCCGCG           TCAGGTCTTTCGGCA  57 15
QR90_RS03675 NONE
QR90_RS03670 NONE
QR90_RS03665 NONE
QR90_RS03660  763175 ..  763196 -  -9.3  -2.62515   AACTGCGCGACATCA           CCCCCGCCG AGCG CGGCAGGGC            CATGCGGACCTTCTT  51 320
QR90_RS03650  761723 ..  761760 -  -3.3  -3.13071   AATGCAGACGGAACA   GGAGG-CAGCATGACCCA GTA TCGCCCATGCCGGCCGCC   GCGTTCTGTCTCAAA  44 91
QR90_RS03645  760792 ..  760805 -  -5.9  -3.53012   GGGGTCTCGGGGAAA               GGGGC CGTC ACCCC                GCCTCCGCCCGGCCC  55 19
QR90_RS03640  759474 ..  759487 -  -3.1   -2.8001   ATAATTTTTAGGATA               GACTA AATA CAGTC                CGAAGTCAATTGCGG  40 72
QR90_RS03635 NONE
QR90_RS03630 NONE
QR90_RS03625  756837 ..  756851 -  -7.8  -2.73542   TTCAAGTCGGAATGA               CCCTCC GCA GGAGAG               ATGCTCAGTCGGTGG  52 30
QR90_RS03610 NONE
QR90_RS03605 NONE
QR90_RS03600  750690 ..  750708 -  -2.2  -3.53811   CTGACCCTGGCCAAA             CAGGTGGC CAA GCTGCCCG             AGGTCGTCGCCCAGA  50 320
QR90_RS03590  748165 ..  748183 -  -2.2  -4.55295   TGTTCCACAAAGAAA             CGGTGGGC GAC GCCCTGCA             GGGGCTGGCCATGCT  71 222
QR90_RS03580  746461 ..  746494 -  -7.3  -3.20307   GCAAGATGAGCAAGA     CCGCCAGCCTGGCCTG AAC CCGGC-AGACCGGAGG     CGGGCTCTGCCGGTT  56 74
QR90_RS03570  743838 ..  743859 -  -7.2  -5.44119   GTCACCTCAAAAAAA           GCCCCTCC GCTGGG GGAGGGGA            TAAGGCCACGTTCAG 100 47
QR90_RS03565 NONE
QR90_RS03560 NONE
QR90_RS03555 NONE
QR90_RS03550  741585 ..  741598 -  -8.1  -3.86346   GCAGGGCGCCAGAAA               GCTGC GGCT GCAGC                GCCACCGCCCCCGCT  67 95
QR90_RS03540  738707 ..  738717 -  -5.4  -3.53224   CATCGTTTTTGCAAA                 CGAT TCA ATCG                 GAATCCGTATAAGGC  53 128
QR90_RS03530 NONE
         cdd  735421 ..  735444 -   -11  -4.79223   GCAGAGGACTAAAAA          CCCCCTCTCC GAGA GGAAAGGGGA           GAATGGGAACGCTCT 100 71
QR90_RS03485  727726 ..  727784 - -11.5  -2.61484   AGACGAAGTAACCCA CAGGTCAGGCTGGGGCGGAGGCGTG-GA CCAT CCACACGCCTCCGCCCCGGCGTTTGCAG CCCGGCCATCCTCCT  62 39
QR90_RS03470 NONE
QR90_RS03465  722632 ..  722643 -  -2.2  -3.76224   GCCGCATCGAGGAAA                CGCA GAAG TACG                 AGACCCTGGTGCGCC  53 480
QR90_RS03435  719357 ..  719367 -  -4.6  -3.08133   CACGCAGGCACGCAA                 CGCG GCC CGCA                 CCGGCAAGGCCTTCG  46 174
QR90_RS03410  713315 ..  713332 -  -6.9  -2.78816   TGATTTTTCAGGAGA             TGGGGGG GTTG CCCCTCA              GTGCCCCAGAATCTT  49 23
QR90_RS03400  709451 ..  709496 - -28.3  -3.09878   GTCACCCACCGAACA GGGCGAGGCCGACCTGGGGAC GCTG GTCCCGCGGCCGGCCTCGCCC TTCCCGCCTGCTTAT 100 37
QR90_RS03395  708315 ..  708329 -  -8.6  -3.65351   GGACTCTGATTGAAA               GGTGTT GAA AACACC               TGGAAATCCGAGCAG  65 127
QR90_RS03390 NONE
QR90_RS03385  706643 ..  706655 -  -4.8  -4.18018   TGGGGCCAGGGAAAA                CAGC GCGGT GCTG                GGGCTGTTGCGCGGC  66 371
QR90_RS03375  701867 ..  701919 - -10.3  -3.63515   TGTCAGCGTCAACAA CGACATCGTCCACGGCCTGCCGACG CGC CGTCCGCTGGCCGCCGGGGACGTGG TCAGTCTGGACGTCA  67 524
QR90_RS03365  700915 ..  700928 -  -2.3  -3.73953   ACGAGTTCGAGGAAA               CGCTG GCGG CAGTG                CGCGATCAGCAGCGC  52 57
QR90_RS03345  697850 ..  697871 -  -9.5  -2.89191   CCAGACCCTGAGACA           GCGGGA-TGA GGC TCAGTCCCGC           CGGCCTTCCACGGCT  58 16
        ruvA  697092 ..  697134 -  -5.6  -3.01712   GGGTGGCGGGCAAGA CTGACGGC-GCCGCCGTG-GG CCGC CCTCACCGCAGCCGCC-CCAG CCCCTTGCGAATCAG  49 8
QR90_RS03335  695269 ..  695285 -  -3.5  -3.14463   AACCCCTTGCAGGAA              GCGCTGC AAA GCGGCGG              CGACACCAACTGGGC  45 494
QR90_RS03325  694506 ..  694527 -  -7.9  -4.48987   TGGTCATAAGGAAAA           GCCCCCACC GTAA AGTGGGGGT            CTTTCATTTTGGTTG  81 35
QR90_RS03320 NONE
        metG  684705 ..  684734 - -16.5  -4.08485   TGTATCCAAATCAAA       GCTGCCGGAGG CCTGTTCC CCTCCGGCAGC        TTTTTGATGTTTCGC 100 41
        rapZ  682340 ..  682354 -    -7  -2.78463   ACTCCTGCGACCAGA               GGCAGG GTT CCGGCC               CCGGCACTTCAAGCC  49 79
        yvcK  680860 ..  680876 -  -6.5  -3.05844   GGCCTTAGCGTAACA              GGCCC TGTCTGT GGGCC              TGCGGCGGTGGGTAG  51 69
QR90_RS03270  679517 ..  679544 - -14.2  -3.39595   GGCAACCAGTCAGAA        GGGGAAACAGTG CTGA CGCTGTTTCCCC         TTCTTTGGTTTATCC  83 35
QR90_RS03245  673997 ..  674013 -    -8  -3.09492   CGCGCAACTCGAAGA              GGTGCT GGCCG AGCACC              AGCGGCGCCTGAGCG  52 317
        rplS  672668 ..  672691 - -13.8  -4.45544   TCTGACCAACGAAAA          CCGCCCACCC CAGA GGGCAGGCGG           CTGAGGGTCAACCCC 100 45
QR90_RS03230  672214 ..  672242 -  -6.7  -3.73968   AAAGGGCGCAGGAAA        CGGATTCCGGC TGTTATG GCTGGAATCCA        TTTCTTTGCGGGATT  62 40
QR90_RS03220  669498 ..  669553 - -19.3  -2.75294   TCAAACTGTCTAAAG GTCAAACGGTCTAACCG-CAAAGGCG GACAG CTTCTCTGGCGGTTAGACCGTTTGAC GGTTCGACGGTTGGA  87 50
QR90_RS03215 NONE
QR90_RS03210 NONE
QR90_RS03205  665499 ..  665532 -  -9.5  -2.71144   CATCCTGCTGAACGA     TCTGGCCGCCC-TGAG CCG CCCACGGGGGGCCTGA     AATTGAGACCCTGAT  57 95
QR90_RS03180 NONE
QR90_RS16610 NONE
QR90_RS03170 NONE
QR90_RS03165  655131 ..  655150 - -10.6  -4.43397   GTGCAAAAGAAAGAA            GCCCCGGC AAAC GCTGGGGC             GTTCTCCTTTGTGGT  95 75
QR90_RS03135  649403 ..  649426 -  -5.9  -3.55714   ACAGTGACGAGAGAA          GCACGGCAC GTTCCG GTGGCGCGC           TGAGAGACGGCTGCC  57 45
QR90_RS03125  646594 ..  646617 -  -7.4  -4.27617   GACACGCCATCAAAA          CCCCCCTCCTG CGA CAG-AGGGGGT          CTTTGATGGCGTGCG  76 50
QR90_RS03115 NONE
QR90_RS03110 NONE
QR90_RS03105  642495 ..  642520 - -12.6  -3.09878   CGGAGCCAGCGAAGA         CCCGGACTGC ACAGAG GCAATCCGGG          CATGATCGAGAGTCA  71 59
QR90_RS18305 NONE
QR90_RS03100  638517 ..  638529 -  -7.7  -2.62184   TGGCGCTGGACATCA                TGCTG TCT CAGCA                GGAGCAGATCGGGCA  48 487
QR90_RS03090  636852 ..  636876 -  -3.3  -3.65046   CGCGTACTGGAACAA          CCGCACCTACC TGG GGCTGGGGCCG          GGGGCAGCGGGCCAT  51 428
QR90_RS18145  633715 ..  633742 - -15.7   -2.8547   ACGCTCCACAGCAGA        GGTGTTGGGCT ACCAAA AGCCCAACACC         TGCAGTTCCTCGTTC  79 7
        ssrA  632660 ..  632679 - -10.7  -5.09685   CAATATAGAGAAAAA            CCCTGCC GGGGGG GGCAGGG             TCATCTCTGTGTGGT 100 37
QR90_RS03060  632512 ..  632530 -  -9.5  -5.60689   CCAGACAATAAAAAA             GCCCCGC GCCAG GCGAGGC             TTTTTTATTGTGGTG 100 36
QR90_RS03045  627726 ..  627759 - -19.7  -3.01791   AGTCCGCCGGCAAGA     GCAGCGTCGCCCGCGA AAC TCA-GGGCGACGCTGC     TCAGCGGGCGGAGGT  93 41
        solA NONE
QR90_RS03035  625660 ..  625683 - -11.7  -3.75153   CGCCTTCAATGCAAA          CCCCTCCCA GTCTGG CGGGAGGGG           CCGACGTGCAGAGCG  78 46
QR90_RS03030  624858 ..  624876 -    -8   -3.5764   AAGGGCAGGGGCAAA             CGGGCGGC GTG ACCGCCTG             ACCTTCCGGCCCCCT  62 39
QR90_RS02990  613925 ..  613948 -  -3.8  -3.65294   TCCCACAGAAAGTAA          GTGGC-CCCGA TGT TCGCGCACCAC          ACCACCAGCACGTCC  53 333
QR90_RS18300  612889 ..  612911 -  -2.5  -3.03124   GGGCAGCGGTCAACA           CGGGCGCCG TCTGC CAGCGACAG           GCGCAGTCTAGGCCA  41 135
QR90_RS02980 NONE
QR90_RS02975 NONE
QR90_RS02970  610737 ..  610771 - -13.7  -3.96148   GCCCCCCACCACAAA    CCTCCCCCATCCAATC GATT GAC-GGATAGGGGAGG     GGGAGAGGCCCGGTT  86 55
        gatB NONE
QR90_RS02955  607221 ..  607234 -  -8.1  -3.28712   TGTCTTTCTGGAGAA               CGGTG AGGT CACCG                TCGACGTGACGCCCA  55 323
QR90_RS02945 NONE
        lpdA  603908 ..  603927 -   -15  -4.60487   CAGCACCGTCAAAAA            CCCCCAGG ATGG CCTGGGGG             TTTTCTCGTGTCTCG 100 71
QR90_RS02915 NONE
QR90_RS02910 NONE
QR90_RS02905 NONE
QR90_RS02900  597021 ..  597036 -  -3.9  -3.54089   TAGAGAGACGAAACA              GGGAC GTACTG GCCCC               CCAGCCTGCGGGTGC  53 54
QR90_RS02890  595135 ..  595145 -  -2.4  -4.63932   CACGCTTCAACAAAA                 CGGG AGG CCAG                 AGTTCTCGGGGAGAG  68 311
QR90_RS02885  594705 ..  594720 -    -6  -3.12351   GTGCTGGACAGCGAA              CTGCCC GTGC GGGCCG               TGAATGCTGAAGGCA  50 211
        mnmA  590269 ..  590314 - -14.1  -2.73159   GTAACGGCGCGAAAG GTCAGAGGGGTTCAAGAGG TTTCAGTG CCTCTTGAGCCCCTTCGAC GGTTCACCGTCAGAT  72 35
QR90_RS02835  583741 ..  583769 -  -6.5  -3.53531   CGAGGAACACGAGAA        CGACGGCCGGGTG GAA CTCGGGGCCATCG        TGGTTCTGAGCAACG  55 301
QR90_RS02810  578019 ..  578051 -   -15  -3.02461   GAACCGTCCTGAACA     CCACAGCGCCACCTC CGAA GAAGTGGCG-TGTGG      TGGGGGCGCGGCGCG  78 225
         hpt  552715 ..  552732 -  -6.9  -4.08692   GAAGGGTGTTGAAAA             CACCCGG AAAT CCGAGCG              AAGCGAGCAGGAGAA  67 113
        ilvD  550818 ..  550828 -  -3.2  -3.72576   TGGCGTTGTATCAAA                 CCCT TCG AGGA                 GAAGGCTGGCCGCGA  54 122
QR90_RS02685 NONE
QR90_RS02680  549375 ..  549395 -    -4  -3.07816   CCCGGAGCCAGTGAA           CTGGACGCCG AAA CGGC--CCAG           ATGCTGGTGTCCAGC  43 276
QR90_RS02655 NONE
QR90_RS02650  542062 ..  542098 - -20.2  -4.07568   TCTCCCGGCTGAAAA    GAAGAGGGCGGAGCGC CTCAC ACGCTCCGCCCCCTCC    CGTCCGGATATTCAG 100 37
QR90_RS02645  540527 ..  540545 -  -4.4  -3.73068   TTCTGAAGGCAAGAA             GGCACGCA GTC CGTGCGCC             GACGCCCCCGGCTTC  56 50
QR90_RS02640  539350 ..  539364 -  -3.4  -4.07885   GAGGCCTCGGCAAAA               GACGGC ATG GACGCC               GTGAAGCGTGCGGCG  60 84
QR90_RS02630  538091 ..  538101 -  -2.4  -2.60032   GGGCGGCGAAAAAGC                 GGTC ACA GGCC                 AAGTCTAACGTCAGG  38 89
QR90_RS02625  535873 ..  535892 -  -7.1  -5.75538   GCCAAAAAAGAAAAA            CCGG-GGC GCTCG GCCTCCGG            GATTCCATGGTATCA 100 85
QR90_RS02620  533960 ..  534000 - -13.3  -2.54896   GCGTGATGGAACGCA GC-GGCTTCACGCGCGAG GAGGTG CTGGCGCGTGACGCCCGC  CAGACCCCCGCCGCC  66 162
QR90_RS02610  531927 ..  531956 - -12.2  -3.17319   CGGAAGGCAGGAAGA       GGGGGCCATCTGC ACCTG GCAG-TGACCCCC       CTCTTAAGGACCAAC  70 44
QR90_RS02605  530984 ..  531034 -  -5.2  -3.32022   GGTGGTAGAGATCAA CGCCAACGCCGCCCGCCTGGACC TCGACT GGCGC-GACGCCCTGCGCTGGCG CGAGCGACTGACCTT  49 219
QR90_RS02590 NONE
QR90_RS16595  526510 ..  526523 -  -3.7  -3.14132   CTGGGCGGTCAGCAA               CCTGC TGGT GCGGG                CGGCCGGCGGCGCGA  45 407
QR90_RS02575  524434 ..  524464 -  -3.1  -3.58726   GTCCGGCAGACACAA      CCCGGC-CCGGCTG CCCT CAGTCGGCGCCCTG       TGCCGTCACCTTCGG  51 11
QR90_RS02570  522832 ..  522846 -  -2.8  -3.44146   CCGCTGGAGAATGAA               CCAG ATTTCGA CTGG               TCTTTAATCGGGGCC  47 504
QR90_RS02550 NONE
        odhB  518721 ..  518757 - -14.5  -3.27994   CGAACCCGACAGCAA   GCGGCGGCC-TCCCTC ATGTCA AAGGAAAGGCCGCCGC    GCCGTAACGGTTTAC  82 37
QR90_RS02540  518081 ..  518094 -  -5.9  -4.38927   GGCGGACATAACAAA               GGACG AGTT CGCCC                CGATGGCGGGCGGCC  75 92
QR90_RS02530  516011 ..  516053 -  -3.3  -2.78816   TGAGCGGCGACGACA TCCACAGGGCCGACGACTGGT TTG ACC-GTCA-CGGCCCGAAGGC GGTGCTGTTCGGGCG  40 314
QR90_RS02510  513592 ..  513617 -  -2.5  -2.98015   CGCAACGACGAGAGA         TGCGGACTTCA GGGG TGAAATCCGGG          CTGAGACCAACTGGG  41 54
QR90_RS02505 NONE
        cysC NONE
QR90_RS02495  510620 ..  510636 -  -3.7  -2.90349   GTCTGAAAGTTAAAG              GGTCAAA AGG TCTAACC              GCGAAAGATTTGCAC  44 70
         sat  509388 ..  509404 -  -2.2  -4.70879   GTCAAACTGCAAAAA              GCTCTG GCCGT CAGACC              TTTAGACGGTTCGAC  72 46
QR90_RS02480  507343 ..  507359 -  -7.9  -4.14243   CAGTTCACCGCAAAA              GGCAACC GAG GGCCGCC              CCCACCCACAACGCC  72 117
QR90_RS02475 NONE
         xpt NONE
QR90_RS02465 NONE
QR90_RS02460  503447 ..  503483 - -11.5  -2.72344   CGCCACCGTCAACGA   CGCGGCCACCAC-CGC CATCCT GCGTGAGGTGGCCGCC    GAGACCTTCGGCGAT  59 511
QR90_RS02430  496221 ..  496235 -  -3.5  -3.31322   CGCAAGCGCCGAGAA               CCAGC GACAG GCTGA               GGAAGGCAAGGGTTC  46 95
QR90_RS18280  493510 ..  493533 - -16.8  -4.23794   TTAAGGCAAGAGAAA          GGGAGAAGCC ACGC GGCTTCTCCC           TCTTGACAGGTCAGC 100 47
QR90_RS02420 NONE
QR90_RS02415  489120 ..  489150 - -21.3  -3.65812   GGGCTGGCAACAGAA       CGCACCCGGATCA GTCTG TGATCCGGGTGCG       CCTGATGAAAGAGAA 100 47
QR90_RS02410 NONE
QR90_RS02405  485340 ..  485378 -  -5.8  -3.16564   TCGTGATTGCAGGAA   CGCACTCGATGGCGCTGG ACC CCTTCACCATCGGCTACG   CCATTCCGCCCGCGC  50 477
QR90_RS02390  483958 ..  483971 -  -3.7  -2.70932   GGTGGCGGGGAAGCA               GGGCG GCCA CGCGC                AGCGCGTTCATCCTT  42 33
QR90_RS02385 NONE
QR90_RS02380  481570 ..  481582 -  -4.8  -3.05935   ACATGGCCTATTCAA                CCTC TCGGC GAGG                CTGGCAGGGGGTCAC  47 37
        rraA NONE
QR90_RS02370  480098 ..  480108 -  -4.6  -3.35996   GAGCCTGATGCAGAA                 CGCC GCC GACG                 TGGGCGCGTACCTGC  49 388
QR90_RS02350  476365 ..  476399 -   -10  -2.51888   CCTGAAAGTGAACAG     TTGAGGGCAGAAGG AAACGCG CCTTCTGCCCTCTG     TCCTGTGCCTCCCGC  59 41
QR90_RS02340  474356 ..  474378 - -10.5  -3.18264   CCGCGTATGGATGAA           CCCAGCGGG GCTTT CCCGATGGG           TTAAGGAATTAGGCG  64 50
QR90_RS02315 NONE
QR90_RS02310 NONE
QR90_RS02305  468297 ..  468311 -  -2.8  -3.85698   TGTTTCGTGTAGAAA               TCGG TGCTGTC CCGA               TTTCTACACTCCACG  56 118
QR90_RS02300 NONE
QR90_RS02295 NONE
        nrdR  466627 ..  466639 -  -3.3  -2.80438   GGAAACACCGAACGA                CACCG TCC CAGCG                CGGAAATTTTGACCC  40 125
QR90_RS02240  458423 ..  458443 -  -5.4   -2.8085   GCAAGGTAGGCAAAG            GCACGC AAGTCTGAG GCGTGC            GGTGAGGCGCTGTTC  44 39
QR90_RS02235 NONE
QR90_RS02230  456444 ..  456457 -  -3.1  -3.87815   CGTCACGCTCACAAA               CGCAGA CCT TC-GCG               ACATGCCCGCCGGGA  56 506
QR90_RS02200  450460 ..  450476 - -10.1  -5.69262   GGACAAAAAGAAAAA              GCCCGTC ATA GACGGAC              TTCTTGTGGTGGAGC 100 32
QR90_RS17495 NONE
QR90_RS02155  438173 ..  438200 -  -7.6   -3.1634   CCGGAAAGCAGGCAA        CGGCACTCGCCGC CGG GCAGCG-GCGCGG        TTGGATTGTCGATGC  56 288
QR90_RS02150  436742 ..  436778 -  -5.1  -3.83205   ACCGGGCAGAGCAAA   GGGGAAGGGCGCGGC CTCCAGTTC GCCGCGCCC--CCCT   GATCCATCGCCTTTA  60 38
QR90_RS02145  436453 ..  436472 -  -3.5  -2.81133   CATGGATTCAGGATA            CGGCG CTCAGCCTTC CGCCG             TGGGGTCCACGCCCT  40 12
QR90_RS02140  436035 ..  436057 - -11.3  -3.54424   CGCCACTTCCTGAAA          GGCCGCAGGC CCAC GCCTG-GGCC           ACCGAGACGCAGGCA  73 52
QR90_RS02130  435042 ..  435069 -  -4.9  -3.28712   GGTGCGCCTGGAGAA        GCGCTGAGGC ACTGGCCTG GCCTCAGC-C        GGACTCTGCGCGGTC  50 20
QR90_RS02100  428990 ..  429002 -  -3.3  -4.30719   CTGGCCTACAAGAAA                TGCGC CGT GGGCA                AGCTGGTCAACCTTC  67 128
QR90_RS02070  423666 ..  423709 -  -3.6  -3.25823   GGCGGGGGAGAGGAA GGCGACACTCCGGC-GGGGCT CAC AGCCCCAGCAGGCCCACTGCC GCCGTGACTTCCAGT  46 1
        hemL NONE
QR90_RS02060  421820 ..  421836 -  -3.6  -4.56597   CGGGCGGTGGAAAAA              CGTCCA CCCCT TGGCCG              ACTTACAGCAGCGCC  69 28
QR90_RS02055  420729 ..  420764 -  -3.8  -3.55622   TGGAACCGGCCGAAA    CCCTGCTGGACT-GCGC GGT GCGCAAGACCCACGAGG    AAACAGGCCTGGGCG  51 296
QR90_RS02045  419306 ..  419339 - -13.8  -5.06414   GCCTCTGAAGAAAAA     GGGGCCGCCGGG CGTTGATTTT CCCGGCGGCCCT      TTCACCGAATGTAGT 100 42
QR90_RS02025 NONE
QR90_RS02020  415863 ..  415911 -  -7.6  -2.78384   GGCTGCGCGAGCAGA TCCACGCTTCGCAGTGAGCGGCC TCAGCG GGCCAC-CACCGCG-A-CGTAGA CCTCTGCAACGCCTG  52 0
QR90_RS02000 NONE
QR90_RS01995  411679 ..  411703 - -12.8  -4.03234   GTCTCCGCACAGAAA          GTCCCCCGGC GAGAT GCTGGGGGAC          TTTCTGTTGGGGAGA  86 63
        rpsP  406539 ..  406554 - -11.8  -5.14563   GCCGGCATGAAAAAA              GGCCCC CGCA GGGGCC               TCTCTTCTTGAAGTG 100 46
QR90_RS01965 NONE
        rimM NONE
        trmD NONE
QR90_RS01950  403637 ..  403672 -  -8.8  -3.78775   GCGCGTACTACGAAA    CCCTGCTGCGCGAGGGC AAC GCCCACG-GCGGCGAGG    CGTACCTCGTGCTGT  67 498
QR90_RS01940  401773 ..  401810 - -12.1  -5.00616   GGCCGCCCCAAAAAA   GCTGGAAGCCC-TTCTGA ATT TCAGAAAAGGCCTCCGGC   TGTTGGAGTCTGCTC 100 70
QR90_RS17490  401384 ..  401420 -   -21  -4.56914   GGATCTAAAGTAAAA    GAGTGCCTCTTCCGTC GTTTG GTCGGAAGAGGCACTC    TTGTTTTGTCAAATA 100 57
QR90_RS01935 NONE
QR90_RS17050  396831 ..  396870 -  -5.7  -3.15544   CCTGACCCGCACCAA CCGTTTCGGCGGCACGG CCCTAATT CC-CGCCGCCG-ACCGG  GGCCACCTGGCCTAC  50 331
QR90_RS01895 NONE
QR90_RS16570 NONE
         tal  387920 ..  387955 - -11.9  -3.97307   TCCAGGGAAGAACAA    GCGCCTCATCGC-CTG TTGAC CGGCACGATGAGGCGC    TGCGACGTTCAGCCT  83 48
QR90_RS16565  382994 ..  383017 -  -5.2  -3.01712   GGGCGGGCTGGAACA          CTGGCG-GGCG CTG CCCCACACCAG          CCTCGATCCGCTGTT  46 194
        ccsA NONE
QR90_RS17485 NONE
        ccmE  379546 ..  379570 -  -5.6   -3.1552   CGGGACGCAGGAAGA          GCGTTCACCG CGCAC CGCTGACCGC          GTCCCGCCCCGCTCA  51 38
        ccsA  377234 ..  377283 - -17.7  -2.70532   ACGCCCAGAAATTCA GGACGACGGGCCGGCCCTTCAGG CTCG CCAGACTGACCGGCACGCCGTCC AGGCTTTCTAGCGTG  86 387
QR90_RS18265  376376 ..  376406 -  -3.2  -3.21416   CAGCGCCAGCAGCAA       CAGGCTGAGG ATCACGCGCCA CCTCCGCCCG       TGTCCCGGCGCACCT  44 6
QR90_RS01825  375217 ..  375227 -  -3.2  -2.82936   ATGGAAAGGGGAAAG                 GACA ACT TGCC                 GGAGGCGGGTGTAGA  42 142
QR90_RS01820 NONE
QR90_RS01815  374121 ..  374131 -  -8.2  -3.54424   TCTTACCCCCTCAAA                 CCGG CAA CCGG                 TACAGCGTCACGTCG  65 10
        moaD  370909 ..  370921 -  -4.8  -4.18018   CGCCCTGATGGAAAA                CGTG ACCTA CACG                CTGGGCTTCGGCAGT  66 396
QR90_RS01770  364900 ..  364918 -  -9.5  -5.29782   TATAGGCACAAAAAA             CCGCCCC ACAAG GAGGCGG             CTGAAAGGGAGAGGG 100 50
QR90_RS01735  358979 ..  359000 - -15.9  -4.14392   TCCGAACCGTCAAAA           CACCCGCCA GTTG TGGCGGGTG            TTTTCTGGGTCTGAA 100 88
QR90_RS01725  356523 ..  356548 - -12.6   -5.4756   AATCCCAACAAAAAA         CTGACCCCGG AGACAA CCGGAGTCAG          CGCAGTGTGCTCAGC 100 57
QR90_RS01720  355374 ..  355397 -  -5.9    -3.214   TGGACGACACCAACA          GGCTCAGCG CCCTGC CGCTGGACC           AGCAGCAGCCCTGCC  50 158
QR90_RS01690 NONE
QR90_RS01685 NONE
QR90_RS01680  348801 ..  348813 -  -4.8  -4.72272   TTTCTTCATGAAAAA                CCTC CAGTT GAGG                ATGGGTGTCGAGGGG  78 58
QR90_RS01675  347390 ..  347437 - -13.5  -2.64337   CAGGCCAAAACAGAG GTGGGCGAGGGAAACGGGCGTCC GTGT GGTCGCC-ATT-CCCTCGCCCAT GGCCCTCACGCCCCG  71 111
QR90_RS01670 NONE
QR90_RS01665  345511 ..  345525 -  -3.4  -4.63527   GGAGGAGGGGAAAAA               CGCCAG AGC CCGGCC               CGTGTCATCAATCCT  69 33
QR90_RS01660 NONE
QR90_RS01655  341873 ..  341885 -  -3.3  -2.59881   GACGGAGGTCATAAC                GGCCA TTG TGCCC                CGTGCGGCGGCACAT  39 6
        galT NONE
        galK  339678 ..  339717 - -19.4  -2.53015   AGACTGTTGAAGCCA  GAGGCCAGCCACCCGGAGA ACG TTTCCGGGCGGCTGGC-TC  TTTTCGATCGAGTGC  87 56
QR90_RS01625  335528 ..  335542 -  -7.8  -4.09685   GTTTAGGCGCGAAAA               GTGAGG AAA CCCCAC               CTTTGAGTATGCAAG  70 104
QR90_RS01620  333774 ..  333791 -  -2.7     -2.89   ACCGGCACAGAAGGA             CG-CAGCT CAC AGCTGACA             GTGGCGAGGCAGGAG  40 70
QR90_RS01615 NONE
QR90_RS01610  331955 ..  331985 -  -3.2   -3.1211   GACCATACGACTGAA      GCG-GCGGA-CGGC ACGCG GCCGGCCCGCTCGT      TGTGCAGGTCTGACG  44 219
QR90_RS01580  323046 ..  323092 - -10.6  -4.25104   CGCCGTGCAGGAAAA CGGCGGCGGCAGCGTGGGCCAG GAG CTGACCCGCAAGGCCGCCAACA GCGCCCAGGGCCTGC  81 330
QR90_RS01570  321108 ..  321157 -    -2  -3.82084   GGTCAAGAGCAAGAA GGGC-ATCGGCGGCGGC-TACGCG CTGT CGCGCAAGCCGGGGCTGATCAGCC TATGCGAGGTCGTGC  56 298
QR90_RS01555  319232 ..  319255 -  -5.2  -2.71791   ACGGCCTGGGCAAAG          GTGAGCATCG TGGG CGAGGCTAAC           ACTTGTGGGGGCCTG  44 47
        pyrF NONE
QR90_RS01545  317272 ..  317282 -  -8.2  -2.52464   GGGCGCCGGAACTGA                 CGCG GGC CGCG                 CTGGTGGCCGCCTAC  51 352
QR90_RS01535 NONE
QR90_RS01530  313535 ..  313551 -  -2.1  -4.64861   TGTCTGGAAAAGAAA              TCCGAGC GAA GCGAGGA              GGAGGAGAACGGGTT  68 213
QR90_RS01525 NONE
QR90_RS01520  310836 ..  310858 -  -2.7  -4.13767   TCCGGCACCGGAAAA          TCCAGCGTCT TGCA AGA-GCTGGC           CCGCCGGGGCCACCG  61 448
        alaS  306879 ..  306918 - -28.1  -2.78384   CCCGTCCGCACCACA  GCGCTTGCGCCCGAGAA TCTGTT TTCTCGGGCGCAAGCGC   TGTTTGTTGCTGAAG 100 198
QR90_RS01485  303172 ..  303183 -  -5.8  -3.57144   CTGCCGAGGCGTAAA                GCCT GTTC AGGC                 CGTCAGCGACTCATT  57 64
QR90_RS01480 NONE
QR90_RS01475 NONE
        thrC NONE
QR90_RS01465 NONE
QR90_RS01460  298518 ..  298528 -  -6.8  -2.82623   GGCCGCCCACAAGGA                 GCTG GCG CAGC                 AGACGGCGTAACGCT  49 82
QR90_RS01450  296473 ..  296504 -  -5.8  -4.61824   CAACAACAAGGAAAA      TGCCAC-CCTGACGC ACC GCATCGGGCGCAGCA      TGGACTACTGGTTTC  78 331
QR90_RS01440  293815 ..  293832 - -12.7  -4.25283   ACCTGGCGAGGAAAA             GCCTCGC ATTC GCGAGGC              TGAGGATTCACCGGG  95 358
QR90_RS01410 NONE
QR90_RS01405  287691 ..  287725 -  -5.4  -3.28712   CGCGCCGCCGCAGAA     CGTGCTGGGCGGCCCG GTG CGGGCAGGCGAGCGGG     CGCCCTGATCCAGTC  50 45
        mqnE  285869 ..  285901 -  -2.5  -3.21593   CAGGCGGCCAGAACA      GGGGAGGGCACCG CGTTAAT CGGCGGCCTCGGC      TCCGGTCTTCGCAAA  43 8
QR90_RS01390  285407 ..  285441 -  -6.2  -3.55444   GTCTGAGGGTCTAAA     GGTCTGAGGGATGGGG GAT CGCCTGCCCCTAGACC     TTTAGTCTGTTTGAC  57 67
QR90_RS01385  284476 ..  284499 -  -5.2  -4.66833   TTTGAACTTCAAAAA          GAGGGAGCCT TGCG AGGCTCTCTT           TTTTATGGCTGTGGT  74 51
QR90_RS01380  283461 ..  283483 -  -4.1  -2.73364   CGCCGACGGCAACGA          GGCACCG-CA AAAT TGTCGGTGGC           CTTGGGACGGGGCTG  42 55
QR90_RS01375  282785 ..  282804 -  -4.4  -4.32482   ACTCATAATCCAAAA            TCATACTA TGAG TAATATGA             TAAAAGCGGTTCTCT  66 167
QR90_RS01370 NONE
QR90_RS17475 NONE
QR90_RS01365  280014 ..  280030 -  -2.9  -3.88291   GAGGATGGTCATAAA              TGCTCCT CAA AGGAACT              GGGCTGTGCCAGAGC  56 370
QR90_RS01355 NONE
QR90_RS01350  278105 ..  278118 -  -5.9  -3.21218   AGCCCTGACCATGAA               CCCCG CTCC CGAGG                CCAATTTCACCGGAC  50 336
QR90_RS01325 NONE
QR90_RS01320  273389 ..  273410 - -10.1  -5.37345   CGTAAGCAGAAAAAA           GCCCTCTCC GGGG GGAGAGGGT            TGGGCGAGGGAACGG 100 42
QR90_RS01305 NONE
QR90_RS01300 NONE
        hisD  266827 ..  266841 -  -4.2  -4.14472   GCAACAGGTGGAAAA               CGGACA GGC CATCCG               CATGAGCGTGCTGTA  63 465
QR90_RS01275  264429 ..  264475 - -21.7  -3.54543   AGGCAGCGGTTGAAA GAGCCGGGGACAGGCCGGAA ATCGTTCA TCCCGGCCTGCCCCCGGC-C TTCAAAGTTCAGGCT 100 56
QR90_RS01260  261307 ..  261317 -  -2.4  -2.78912   CAGCAGATACAGAAC                 GCTC ATC GGGC                 CGTAGTGTAGCGGGC  39 58
QR90_RS01255  260757 ..  260767 -  -8.2  -3.29381   CCAGAACACCACCAA                 GGGC CAC GCCC                 TCAAGAACATTCCCA  59 127
        hisF NONE
       hisIE  257498 ..  257535 -  -8.3  -5.24129   GCGGCGCACAAAAAA   GTGGAACGCGTG-CCTCC CCA GGTGGACACGCGCTCCTG   AACAGCCATATGCGG  93 92
QR90_RS01230  256856 ..  256878 - -13.4  -2.76322   GTACGGAAGAGAGCA           GGGGGGCGAA GGT TTCGCTCCCC           TCTTTCGTCAGTCTG  72 33
QR90_RS01220  254975 ..  255012 -  -8.3  -3.14683   ACAGGTGCCGATCAA   GGTGAAGGCCCATGGCC GTTC GGCCATGAGCCTCGTGC    GGTACGGCGCAGAAC  56 301
        dnaB NONE
QR90_RS01200  249321 ..  249358 -  -9.9  -4.21194   GGGCAGGACGGAAAA   TCACCCTGGGTGG GGACACAGCAGT CCGCCCAGGGTGA    TTCCTTGCGGCCTCC  81 43
         gmd NONE
QR90_RS01180  242962 ..  242994 - -24.3  -2.52543   ACTGCCGGCAAGGCA      GTGGTCCGCCTTCCC ATT GGGAAGACGGACCAC      TGTTCTTCGCGCTGC 100 55
QR90_RS01155  236220 ..  236252 - -10.6  -3.66908   CGCGCCGAAAAGGAA     CGCGAT-CTGCTGGA CGCG CCCAGCGGCATCGCG      TACATCGAGCTGGCC  67 336
QR90_RS01135 NONE
        rocF  230679 ..  230708 -  -9.3  -2.64726   GGCCAGAACATCAAC       GCGCCCCAC ATCCTTCTTCGG GTGGGGCGC        TTTTGCTGTGGTGCG  56 44
QR90_RS01115  228045 ..  228062 -  -5.5  -4.13767   CGCTTCACGCCAAAA             GTTGTCC GCAT GGACAGC              GGCAGCCAGGATATT  67 139
QR90_RS01105  225410 ..  225439 - -16.5   -3.2779   GAGAGAAACAGGGAA       GAGGCCGGAAGCGC AAT GC-CCTCCGGCCTC       TCTTTTCGGTCTTTT  88 58
QR90_RS01090  220805 ..  220815 -  -8.2  -2.91695   TTCACCGTCAAACGA                 CGCC GGC GGCG                 AAACTGTGGAGCCAC  55 32
QR90_RS01085 NONE
QR90_RS01080  220569 ..  220585 -  -2.1  -2.71119   ACTGAGCTACAGAAG              CGCGTCT GAA AGGGGCG              AAGGGGAAAAGAAGA  39 40
QR90_RS01075  220433 ..  220460 - -11.2  -4.25104   GGCGGGTCATCAAAA        GCGGCCCACACA TGAA CATGGGGGCCGC         CTTCGATCAAACCGT  89 60
         tuf  219026 ..  219047 - -17.3  -4.43477   CTGAGGCAACGAAAA           GGGGAGGCC CGCA GGCCTCCCC            CCTTCAGTTGACATG 100 46
QR90_RS01065  218338 ..  218356 - -13.1  -4.07885   CATTCGCTGGTAAAA             GCCCGCC GGGGT GGCGGGC             AATACCCACGAGTAT  86 73
        rpmG  218013 ..  218055 -  -6.4  -3.08173   AGGAAGGGCACTGAA TG-GGT-CGCTCCAGACCAGC GTGT GC-GGCCCGGAGCACACCGCA ATCAGACCTTCTTCT  51 27
        secE NONE
        nusG NONE
        rplK NONE
        rplA  215920 ..  215945 - -11.1  -3.97368   GCCGGAAGTTAGAAA         TGAGGAGGGGC CGCA GCCCCCGCTCA          GAAAAAGGTCAGGAC  82 34
        rplJ  215222 ..  215235 -  -5.2  -2.97747   TGGGGAGAGGAGACA               GGGC TTAAGC GCCC                GTGCCCTCGGCCGCG  47 16
        rplL  214734 ..  214762 - -14.5  -5.66684   CAAGGCACAAAAAAA        CCCCTCCAGCCAC GCA GGGGCCAGAGGGG        AATGCACTCCCGGTA 100 48
QR90_RS16555 NONE
QR90_RS00995  209199 ..  209222 -  -7.4  -5.52384   TGCCGACCAAAAAAA          GACCCACTCC GTGA AGAGCAGGTC           TGTGCTGGTCGAGGC 100 31
         acs  207066 ..  207088 -  -2.5  -3.21099   CGCGGCCAGCAGGAA           GGAGGCGGC CATGC GCAGCCCGC           CTAGACGGCGTCCGT  43 26
QR90_RS00985 NONE
QR90_RS00980  206076 ..  206092 -  -3.5  -2.98719   GCAGTAGACGACACA              TCCGGCG GGC CGTCGGT              ACGGGACGGTACGGA  43 48
QR90_RS00975 NONE
QR90_RS00970  204980 ..  205023 -   -21  -4.14392   CGCTAAGCCGCAAAA CGACAGGGGCCGCGCCGGGCG AAC CACC-GGTGCGGCCTCTGTCG TTCCTACAGCGCCGA 100 29
QR90_RS00945  199651 ..  199682 -  -5.7  -3.16564   TGGTGAGGGCAGGAA      GGGGCACGCCGCT CAGGCT AGCGTCCTGCCCT       TCTCCCAACCTGCCG  51 56
QR90_RS00940 NONE
QR90_RS00935  197529 ..  197544 -  -2.4  -2.64099   TCCGCCGACCAGAAT              CCAGGC GATC ACCGGG               GCAGTGGAGCGGCTC  38 69
QR90_RS00930  196782 ..  196796 -  -4.2  -3.14132   TGTTTCGTGTAGGAA               CCGG GAGAGCG CCGG               TTCCTCCACTCCACG  47 128
QR90_RS18235 NONE
         dcd NONE
QR90_RS00875  187805 ..  187820 -    -6  -3.18735   TGAAGACGGGACCAA              GCCGGC TCAG GCGGGC               GAGACGTAGACATAA  51 16
QR90_RS00870  187462 ..  187486 - -13.6  -4.26327   CAGGCATGAAAAGAA          GGCCAGGAGA ATTTG CCTCCTGGCC          CCGCCCGCCGTGTGG 100 44
QR90_RS00865  187053 ..  187070 -  -2.6  -3.16564   GTTGCAGGTCAGGAA             TGGGTG CGGCTC CGCCCA              GCCCGCCACACCAGC  43 1
QR90_RS00860 NONE
QR90_RS00855  184893 ..  184928 -   -22  -3.50393   GCTCACTGCAGACAA    GAGGGAGGCCCGCA GATTCCAG TGCGGGCCTCCCTC     TTGTCTGGCTGGGAC 100 52
QR90_RS00840 NONE
QR90_RS00835  181080 ..  181104 -  -4.2  -3.53811   CGCAGCGGCTGGAAA          CCGTGCTGGT GGCCG AACAGGACGG          AGCGGTGGTGGCCTT  51 317
        dnaE NONE
QR90_RS17015  173971 ..  173995 -  -2.7  -3.14132   CTTTGCCGCCATGAA          GGCCGGATACA CCC TGCACCTCGCC          ACGCAGACGGATGCG  43 384
QR90_RS00815  172192 ..  172240 -  -2.4  -2.72463   ATTGACCGCCAACGA TCCATGC-CCCCAGGG-TAGCG GGTTCGG CGCTGGCCCTGACGCGCAGGGA AGGACGCTACTCCAC  39 32
QR90_RS00810  171227 ..  171244 -  -4.7  -3.53811   TGCACCGCCGCCAAA             CGCGCCC TGAC GGGCAAG              GGCCTGGACTTCCAG  54 303
QR90_RS00795 NONE
QR90_RS00790  167287 ..  167312 -  -4.6  -2.72344   CGTTACCCTGAACGA         GCTGCCCG CCCAGCACAT CGGGCTGC          GGCAGGGGTGGCGGC  43 76
QR90_RS00775 NONE
QR90_RS00765  162242 ..  162262 -  -9.6  -2.96452   ATGCCCAGAACTATA            GGGGGCGG TCTCC CCGCCCGC            TCACCCGTACTTCGC  58 26
QR90_RS00760  161180 ..  161193 -  -3.8  -3.62046   GGAGGCGCTGAACAA               CGTG GACAAG CACG                CCGGGGCACTCAGCG  51 239
        hslO  154487 ..  154505 - -11.7  -2.78371   CACAGCTGTAACAAG             CCCCTCC GCTGG GGAGGGG             TCCCGACGGGTCCTT  66 39
QR90_RS00730 NONE
QR90_RS00725  150821 ..  150843 - -17.8  -3.25223   GAGGCATAGCAGGAA           GGCCAGCATC ACG GATGCTGGCC           TCCGTGTCATCTCCC  91 61
QR90_RS00720 NONE
QR90_RS00715  148497 ..  148509 -  -7.7  -4.19238   GTGGCAACGGGAAAA                CGTGA TCA TCACG                CCGCACATCGCCAGC  73 376
        moaA  142349 ..  142365 - -10.1  -3.28712   TTGGGGCGGCCAGAA              CCGCAGG TGG CCTGCAG              CGCGGTCAGCCGCCG  66 31
QR90_RS00670  141229 ..  141254 - -17.5  -4.15044   TCCGTCCTGAAGAAA         GCGCCGCCTCC TGAT GGGGGCGGCGC          TTTTGTTGTTTCGTC 100 222
QR90_RS00655  139792 ..  139824 - -12.8  -3.02829   CACACCGCCGCAAGA     CGGCGGGAAGAGG TGATCGGG CCTCT-CCCGCCG      TTTTATTGGTTGTCG  71 52
QR90_RS00650 NONE
QR90_RS00645  137440 ..  137455 -  -4.6  -4.08216   TCAGCCGCTTCAAAA              GCCCCA TCCT TGGGGG               GATGAGGTATTTGGG  63 422
QR90_RS00640 NONE
QR90_RS00635 NONE
QR90_RS00630  134681 ..  134693 -  -6.3  -2.62983   TCCAGGGCCATATCA                GTTCA GGA TGAAC                AGCGCGAGGAAGCCG  48 10
QR90_RS00625 NONE
QR90_RS00620 NONE
QR90_RS00615 NONE
QR90_RS00610 NONE
QR90_RS00605 NONE
QR90_RS00600  128653 ..  128673 - -11.8  -5.28176   CTGAGCCATAAAAAA            CCGCCCCC ACTCG GAGGGCGG            CCTTCTCTGCGCTCA 100 45
QR90_RS00585  124020 ..  124042 -  -5.5  -3.04144   GGCCCACCTGGAATA          CCGCG-ACGC CGGA GCGTTCGAGG           GCGGCTTTTCGTGTG  46 385
QR90_RS00570  121090 ..  121107 -  -7.7  -3.91897   CGGGCCATCGAGAAA             CTCGGCGC GGT GCG-CGAG             GGCGTGTTAAGAAAG  67 129
       groES NONE
        groL  115083 ..  115103 - -12.5  -5.14563   TGGGGCATCAAAAAA            GCCGGAGCA TCA CGCCCCGGC            TTCTCTTCTTCCCTA 100 46
QR90_RS00505  111892 ..  111906 -    -7  -2.62396   GACGCGCCGAGATCA               CGGCCC CCC GTGCCG               GGTTCGTGGAGCGCA  48 343
QR90_RS00490 NONE
QR90_RS00485 NONE
QR90_RS00480 NONE
QR90_RS00475 NONE
QR90_RS00470 NONE
QR90_RS00465  106749 ..  106770 -  -8.6  -4.30719   TCCTTCCAGAACAAA           GCCCCCGC CGAGAC GCGGGGGT            TTTTCGTGCTCGCCT  79 52
QR90_RS00450  102706 ..  102740 -  -4.9  -4.26903   CTGAGCGCAGGAAAA    CGCAGGGGGCCGGG TGATCTAT CCCGGCCCC-TGTT     CCGGCTAGTTCAGCA  68 30
QR90_RS00440 NONE
QR90_RS00435 NONE
QR90_RS00430   96967 ..   96984 -  -6.9  -3.53444   CCACGCTGCTGCAAA             CGGTGGG CCAG CGCACCG              TCAGTGCCGCCGAGG  55 263
QR90_RS00385   78986 ..   79026 - -14.8  -3.72576   GTGTGGGCCAGGAAA CCATTCGGG-CAG-GTGCGG CGG CCGCACGCTGGCCCGGACGG CTGGAAAGGCTGCCG  88 451
        lspA   67472 ..   67508 - -16.5  -3.19246   TGAAGTTCAACTCAA    CGGCGCGCCCCCTTCCA TCG TGGAAGGGGGCGCGTTT    TGTGGTCCTGCGTCA  86 55
QR90_RS00305   59723 ..   59754 -    -5  -3.54741   GACGAGCTGCTCAAA      CCCGGTGACGACACC GCT GGCGTCG-CGCTGGA      GGCCGAGCGCGACAA  54 147
        plsY   57884 ..   57907 -  -3.7  -3.21593   GACCCCTCCAGAATA          GCGCAGCCG TCCCCG CAGCCCCGC           GCGGCTCAGCGAACC  47 31
QR90_RS00285   57387 ..   57410 -  -8.8  -5.75342   CTCCTTCAAAAAAAA          TCCGCCACGCA GTC TGCG-GGCGGC          GGTGATTCAACAGGC 100 150
QR90_RS00280   56301 ..   56326 - -11.9   -2.9348   CGCAAATGGGAGAGA         GCCGCCTGA CAGGAAGT TCAGGCGGC          TCTCGTTTCCCGGCA  67 44
QR90_RS00240   46665 ..   46691 -  -4.5  -4.07568   TGGCTGGGGGGAAAA        GAG-GGTGAG CTTCTCGC CTCACCACTC         GCCCAGCGTGACCAG  61 17
QR90_RS16540   44329 ..   44355 -  -8.6  -3.40597   CGGCGGACGGAAAGA         CGCAGACGCCCA CGA TGGGCTGCTACG         GCCTGGGCGTGACCC  61 418
QR90_RS00220   42099 ..   42132 -  -7.3  -5.11937   AAGAAGTGCAAAAAA     CTGTGCCCTGCGCCGT TGG ACGGCGCA-GGTGCTG     GCCCGGAAGATGCCC  93 219
QR90_RS00215   41664 ..   41707 -  -2.5  -2.96274   TGGCCCACAACGAGA CGTGAGGGTGGAGCCGCTCCGC TGC GCGAAGCCGCTCCA-C-T-AGG ATTTTGATTTGAACG  40 21
QR90_RS17010   40816 ..   40827 -  -2.2  -2.70932   GGTGCCCTTCAATCA                CTGC GCTG GCAA                 GTTCACGTCTACGGC  39 356
QR90_RS18210   37641 ..   37661 -  -8.9  -3.02043   AATGCGGTTTTAACA            GCCCTGCAG TCG CAGCAGGAC            CTGAGCGCTGAGGAA  57 59
QR90_RS17445 NONE
QR90_RS17440 NONE
QR90_RS00195   36479 ..   36505 -  -2.9  -5.27399   CAAGACATCAAAAAA         TGCAACTCCCG TCCTG CTGAAGTTGCC         GCTGAGTGTGGGTTG  85 55
QR90_RS00170   31153 ..   31180 -    -7  -4.00348   GGCCAATCAACGAAA        GCAGGCAACC TTTTGACG GGTTGCCTGT         TGCAATGGGTGGACC  67 41
QR90_RS00165   29614 ..   29624 -  -2.4  -2.62184   TGGGCGTTCACAGGA                 CTCC TTG GGTG                 TGGGGGGAGGAGAGC  38 7
QR90_RS00160 NONE
QR90_RS00155 NONE
        eboE NONE
QR90_RS00145 NONE
QR90_RS00140   24726 ..   24755 - -18.7  -2.54504   AGCCCTCAAACACAG       CCCACCCCGCC-AT CGC ATCGGCGGGGTGGG       GGCCATTCCAGATCG  87 243
QR90_RS16535   23497 ..   23519 -  -6.2  -3.77219   AGCAGCCAACCGAAA           CGCTGCCG GAACGCA CGGCAGTG           GCCTTATCCGTTCTC  60 29
QR90_RS00130   22164 ..   22178 -  -7.8    -3.322   AGTTGGATAGAGCAA               CCGCCT TCT AAGCGG               TCGGTCAATGGTTCG  55 381
        ubiA NONE
QR90_RS00105   20580 ..   20598 -    -3  -3.28712   GCCCCCGGCGCAGAA             CGTTCCCG CGG CGCGAAGG             GCAGGGAAGCGCAGC  46 59
QR90_RS00100 NONE
QR90_RS00095 NONE
QR90_RS00090   18607 ..   18651 -  -9.3  -4.15044   TGGCGTGGCAACAAA CGGACCCTCACGCCCGG-CAG TGTAG CGGTCCAGG-GTGAGGGTCAG GGTGATGGGCCTCAG  79 63
QR90_RS00085   16894 ..   16933 - -10.6  -4.15106   TAGGAATTCTCAAAA  CCGGGATGGGGAGGCGGA TTGC TCTGCTTCCCCATCCCCC   TTATGTGCCCCCGTT  81 39
QR90_RS00050   10291 ..   10304 -  -3.1  -3.56643   GCCATAGTGTTTAAA               CCTCCA GTT TGG-GG               CTGGGCCGCCAGCCG  51 174
        rpoZ    9936 ..    9966 - -14.7  -4.22678   CATAGGCAATAGAAA       GTGGCGGATAGGG CCTAT CCCCATCCGCCGC       CGTCCCGCACTACCT 100 40
        tyrS    6293 ..    6318 -  -4.8  -5.06414   TCCCCGGAACAAAAA         GTTATCCACA CCGCCC TGTGCATAAC          TTTCTATTCCGTGTC  83 96
