QR90_RS00005	SM00382	ATPases associated with a variety of cellular activities
QR90_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
QR90_RS00010	SM00480	DNA polymerase III beta subunit
QR90_RS00015	SM01192	QR90_RS00015
QR90_RS00015	SM01193	QR90_RS00015
QR90_RS00045	SM01409	QR90_RS00045
QR90_RS00055	SM00841	Elongation factor P, C-terminal
QR90_RS00055	SM01185	QR90_RS00055
QR90_RS00080	SM00271	DnaJ molecular chaperone homology domain
QR90_RS00085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
QR90_RS00085	SM00387	Histidine kinase-like ATPases
QR90_RS00085	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS00090	SM00448	cheY-homologous receiver domain
QR90_RS00090	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS00195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS00280	SM00859	Semialdehyde dehydrogenase, NAD binding domain
QR90_RS00290	SM01207	QR90_RS00290
QR90_RS00310	SM00732	Likely ribonuclease with RNase H fold.
QR90_RS00375	SM01131	QR90_RS00375
QR90_RS00420	SM00710	Parallel beta-helix repeats
QR90_RS00445	SM00845	GatB domain
QR90_RS00450	SM00028	Tetratricopeptide repeats
QR90_RS00460	SM00382	ATPases associated with a variety of cellular activities
QR90_RS00500	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
QR90_RS00535	SM00883	Chaperonin 10 Kd subunit
QR90_RS00540	SM00267	diguanylate cyclase
QR90_RS00555	SM00855	Phosphoglycerate mutase family
QR90_RS00650	SM00938	Nitrogen regulatory protein P-II
QR90_RS00670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS00670	SM00866	QR90_RS00670
QR90_RS00675	SM00729	Elongator protein 3, MiaB family, Radical SAM
QR90_RS00685	SM00278	Helix-hairpin-helix DNA-binding motif class 1
QR90_RS00685	SM00493	QR90_RS00685
QR90_RS00695	SM00478	endonuclease III
QR90_RS00695	SM00525	QR90_RS00695
QR90_RS00730	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS00750	SM00421	helix_turn_helix, Lux Regulon
QR90_RS00750	SM00448	cheY-homologous receiver domain
QR90_RS00755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
QR90_RS00755	SM00091	PAS domain
QR90_RS00825	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
QR90_RS00825	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
QR90_RS00825	SM00481	DNA polymerase alpha chain like domain
QR90_RS00925	SM00829	Enoylreductase
QR90_RS00930	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
QR90_RS00940	SM00382	ATPases associated with a variety of cellular activities
QR90_RS00960	SM00248	ankyrin repeats
QR90_RS01045	SM00649	Ribosomal protein L11/L12
QR90_RS01050	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
QR90_RS01050	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
QR90_RS01095	SM00382	ATPases associated with a variety of cellular activities
QR90_RS01100	SM00382	ATPases associated with a variety of cellular activities
QR90_RS01245	SM00448	cheY-homologous receiver domain
QR90_RS01310	SM00382	ATPases associated with a variety of cellular activities
QR90_RS01325	SM00344	helix_turn_helix ASNC type
QR90_RS01330	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
QR90_RS01330	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
QR90_RS01395	SM00729	Elongator protein 3, MiaB family, Radical SAM
QR90_RS01420	SM00849	Metallo-beta-lactamase superfamily
QR90_RS01485	SM00955	QR90_RS01485
QR90_RS01505	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
QR90_RS01550	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
QR90_RS01575	SM00646	QR90_RS01575
QR90_RS01590	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
QR90_RS01630	SM00478	endonuclease III
QR90_RS01630	SM00525	QR90_RS01630
QR90_RS01640	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS01680	SM00420	helix_turn_helix, Deoxyribose operon repressor
QR90_RS01680	SM01134	QR90_RS01680
QR90_RS01685	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS01695	SM01133	QR90_RS01695
QR90_RS01730	SM00564	beta-propeller repeat
QR90_RS01740	SM00421	helix_turn_helix, Lux Regulon
QR90_RS01740	SM00448	cheY-homologous receiver domain
QR90_RS01875	SM00226	Low molecular weight phosphatase family
QR90_RS01880	SM00393	Putative single-stranded nucleic acids-binding domain
QR90_RS01925	SM00248	ankyrin repeats
QR90_RS01950	SM00464	Found in ATP-dependent protease La (LON)
QR90_RS01985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS01990	SM00861	Transketolase, pyrimidine binding domain
QR90_RS01995	SM00382	ATPases associated with a variety of cellular activities
QR90_RS02015	SM00851	MGS-like domain
QR90_RS02035	SM00849	Metallo-beta-lactamase superfamily
QR90_RS02060	SM00881	CoA binding domain
QR90_RS02080	SM00028	Tetratricopeptide repeats
QR90_RS02110	SM00646	QR90_RS02110
QR90_RS02130	SM00347	helix_turn_helix multiple antibiotic resistance protein
QR90_RS02155	SM00872	Alpha mannosidase, middle domain
QR90_RS02210	SM00052	Putative diguanylate phosphodiesterase
QR90_RS02210	SM00267	diguanylate cyclase
QR90_RS02220	SM00967	RNA 2'-O ribose methyltransferase substrate binding
QR90_RS02235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS02255	SM00563	Phosphate acyltransferases
QR90_RS02260	SM00382	ATPases associated with a variety of cellular activities
QR90_RS02265	SM00382	ATPases associated with a variety of cellular activities
QR90_RS02310	SM00382	ATPases associated with a variety of cellular activities
QR90_RS02340	SM01329	QR90_RS02340
QR90_RS02350	SM00344	helix_turn_helix ASNC type
QR90_RS02400	SM00563	Phosphate acyltransferases
QR90_RS02555	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
QR90_RS02570	SM00670	Large family of predicted nucleotide-binding domains
QR90_RS02600	SM00481	DNA polymerase alpha chain like domain
QR90_RS02600	SM00483	DNA polymerase X family
QR90_RS02610	SM00028	Tetratricopeptide repeats
QR90_RS02610	SM00671	Sel1-like repeats.
QR90_RS02625	SM00382	ATPases associated with a variety of cellular activities
QR90_RS02705	SM00387	Histidine kinase-like ATPases
QR90_RS02705	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS02735	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
QR90_RS02740	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
QR90_RS02740	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
QR90_RS02815	SM00463	Small MutS-related domain
QR90_RS02815	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
QR90_RS02815	SM00534	ATPase domain of DNA mismatch repair MUTS family
QR90_RS02835	SM00849	Metallo-beta-lactamase superfamily
QR90_RS02870	SM00448	cheY-homologous receiver domain
QR90_RS02890	SM00822	QR90_RS02890
QR90_RS02960	SM00845	GatB domain
QR90_RS02995	SM00090	RIO-like kinase
QR90_RS03010	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
QR90_RS03035	SM00062	Bacterial periplasmic substrate-binding proteins
QR90_RS03045	SM00062	Bacterial periplasmic substrate-binding proteins
QR90_RS03075	SM00450	Rhodanese Homology Domain
QR90_RS03085	SM00729	Elongator protein 3, MiaB family, Radical SAM
QR90_RS03100	SM00487	DEAD-like helicases superfamily
QR90_RS03100	SM00490	helicase superfamily c-terminal domain
QR90_RS03155	SM00347	helix_turn_helix multiple antibiotic resistance protein
QR90_RS03170	SM00382	ATPases associated with a variety of cellular activities
QR90_RS03190	SM00387	Histidine kinase-like ATPases
QR90_RS03195	SM00448	cheY-homologous receiver domain
QR90_RS03205	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
QR90_RS03210	SM01092	CO dehydrogenase flavoprotein C-terminal domain
QR90_RS03225	SM01400	QR90_RS03225
QR90_RS03255	SM00729	Elongator protein 3, MiaB family, Radical SAM
QR90_RS03265	SM00861	Transketolase, pyrimidine binding domain
QR90_RS03295	SM00838	Elongation factor G C-terminus
QR90_RS03295	SM00889	Elongation factor G, domain IV
QR90_RS03340	SM00278	Helix-hairpin-helix DNA-binding motif class 1
QR90_RS03380	SM00341	Helicase and RNase D C-terminal
QR90_RS03380	SM00487	DEAD-like helicases superfamily
QR90_RS03380	SM00490	helicase superfamily c-terminal domain
QR90_RS03380	SM00956	QR90_RS03380
QR90_RS03410	SM00382	ATPases associated with a variety of cellular activities
QR90_RS03460	SM00479	QR90_RS03460
QR90_RS03475	SM00960	Roadblock/LC7 domain
QR90_RS03530	SM00116	Domain in cystathionine beta-synthase and other proteins.
QR90_RS03530	SM01091	Transporter associated domain
QR90_RS03535	SM00829	Enoylreductase
QR90_RS03575	SM00382	ATPases associated with a variety of cellular activities
QR90_RS03595	SM00836	DALR anticodon binding domain
QR90_RS03595	SM01016	Arginyl tRNA synthetase N terminal dom
QR90_RS03615	SM00382	ATPases associated with a variety of cellular activities
QR90_RS03630	SM00382	ATPases associated with a variety of cellular activities
QR90_RS03645	SM00382	ATPases associated with a variety of cellular activities
QR90_RS03685	SM00849	Metallo-beta-lactamase superfamily
QR90_RS03685	SM01027	Beta-Casp domain
QR90_RS03705	SM00382	ATPases associated with a variety of cellular activities
QR90_RS03735	SM00116	Domain in cystathionine beta-synthase and other proteins.
QR90_RS03855	SM00849	Metallo-beta-lactamase superfamily
QR90_RS03880	SM00271	DnaJ molecular chaperone homology domain
QR90_RS03915	SM00382	ATPases associated with a variety of cellular activities
QR90_RS03935	SM01058	CarD-like/TRCF domain
QR90_RS03940	SM00411	bacterial (prokaryotic) histone like domain
QR90_RS03950	SM01207	QR90_RS03950
QR90_RS03960	SM00316	Ribosomal protein S1-like RNA-binding domain
QR90_RS03965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS03995	SM01207	QR90_RS03995
QR90_RS04015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
QR90_RS04015	SM00387	Histidine kinase-like ATPases
QR90_RS04015	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS04020	SM00448	cheY-homologous receiver domain
QR90_RS04020	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS04040	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04070	SM00849	Metallo-beta-lactamase superfamily
QR90_RS04075	SM01209	QR90_RS04075
QR90_RS04075	SM01210	QR90_RS04075
QR90_RS04080	SM00729	Elongator protein 3, MiaB family, Radical SAM
QR90_RS04115	SM00864	Tubulin/FtsZ family, GTPase domain
QR90_RS04115	SM00865	Tubulin/FtsZ family, C-terminal domain
QR90_RS04120	SM00842	Cell division protein FtsA
QR90_RS04155	SM00776	QR90_RS04155
QR90_RS04165	SM00421	helix_turn_helix, Lux Regulon
QR90_RS04165	SM00448	cheY-homologous receiver domain
QR90_RS04170	SM00387	Histidine kinase-like ATPases
QR90_RS04170	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS04175	SM00849	Metallo-beta-lactamase superfamily
QR90_RS04240	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04240	SM01086	C-terminal, D2-small domain, of ClpB protein
QR90_RS04260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
QR90_RS04265	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04280	SM00893	Electron transfer flavoprotein domain
QR90_RS04285	SM00893	Electron transfer flavoprotein domain
QR90_RS04300	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04300	SM01086	C-terminal, D2-small domain, of ClpB protein
QR90_RS04310	SM00642	Alpha-amylase domain
QR90_RS04325	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04375	SM00729	Elongator protein 3, MiaB family, Radical SAM
QR90_RS04440	SM00448	cheY-homologous receiver domain
QR90_RS04445	SM00387	Histidine kinase-like ATPases
QR90_RS04445	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS04460	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04510	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS04560	SM00292	breast cancer carboxy-terminal domain
QR90_RS04560	SM00532	Ligase N family
QR90_RS04585	SM01230	QR90_RS04585
QR90_RS04590	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04595	SM01230	QR90_RS04595
QR90_RS04615	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04620	SM00382	ATPases associated with a variety of cellular activities
QR90_RS04700	SM00881	CoA binding domain
QR90_RS04740	SM00220	Serine/Threonine protein kinases, catalytic domain
QR90_RS04895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS04935	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
QR90_RS04975	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
QR90_RS04995	SM00347	helix_turn_helix multiple antibiotic resistance protein
QR90_RS05030	SM00487	DEAD-like helicases superfamily
QR90_RS05035	SM00487	DEAD-like helicases superfamily
QR90_RS05035	SM00490	helicase superfamily c-terminal domain
QR90_RS05065	SM00478	endonuclease III
QR90_RS05140	SM00257	Lysin motif
QR90_RS05160	SM01329	QR90_RS05160
QR90_RS05180	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS05230	SM00062	Bacterial periplasmic substrate-binding proteins
QR90_RS05280	SM00642	Alpha-amylase domain
QR90_RS05285	SM00642	Alpha-amylase domain
QR90_RS05290	SM00642	Alpha-amylase domain
QR90_RS05320	SM00062	Bacterial periplasmic substrate-binding proteins
QR90_RS05385	SM01120	QR90_RS05385
QR90_RS05385	SM01121	QR90_RS05385
QR90_RS05400	SM00347	helix_turn_helix multiple antibiotic resistance protein
QR90_RS05415	SM00903	Flavin reductase like domain
QR90_RS05430	SM00838	Elongation factor G C-terminus
QR90_RS05430	SM00889	Elongation factor G, domain IV
QR90_RS05445	SM01403	QR90_RS05445
QR90_RS05465	SM01382	QR90_RS05465
QR90_RS05465	SM01383	QR90_RS05465
QR90_RS05500	SM01374	QR90_RS05500
QR90_RS05505	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
QR90_RS05580	SM00327	von Willebrand factor (vWF) type A domain
QR90_RS05605	SM00363	S4 RNA-binding domain
QR90_RS05605	SM01390	QR90_RS05605
QR90_RS05610	SM00662	RNA polymerases D
QR90_RS05645	SM00382	ATPases associated with a variety of cellular activities
QR90_RS05650	SM00382	ATPases associated with a variety of cellular activities
QR90_RS05665	SM00354	helix_turn _helix lactose operon repressor
QR90_RS05705	SM00257	Lysin motif
QR90_RS05740	SM00331	Sigma factor PP2C-like phosphatases
QR90_RS05740	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
QR90_RS05760	SM00363	S4 RNA-binding domain
QR90_RS05785	SM00419	helix_turn_helix, cAMP Regulatory protein
QR90_RS05790	SM00434	DNA Topoisomerase IV
QR90_RS05800	SM00960	Roadblock/LC7 domain
QR90_RS05805	SM00960	Roadblock/LC7 domain
QR90_RS05810	SM00960	Roadblock/LC7 domain
QR90_RS05850	SM00460	Transglutaminase/protease-like homologues
QR90_RS05860	SM00822	QR90_RS05860
QR90_RS05880	SM00382	ATPases associated with a variety of cellular activities
QR90_RS05890	SM00852	Probable molybdopterin binding domain
QR90_RS05915	SM00421	helix_turn_helix, Lux Regulon
QR90_RS05915	SM00448	cheY-homologous receiver domain
QR90_RS05935	SM00382	ATPases associated with a variety of cellular activities
QR90_RS05985	SM00917	LeuA allosteric (dimerisation) domain
QR90_RS06000	SM00257	Lysin motif
QR90_RS06010	SM00986	Uracil DNA glycosylase superfamily
QR90_RS06010	SM00987	UreE urease accessory protein, C-terminal domain 
QR90_RS06025	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06045	SM00354	helix_turn _helix lactose operon repressor
QR90_RS06070	SM00833	Cobalamin synthesis protein cobW C-terminal domain
QR90_RS06085	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
QR90_RS06090	SM00849	Metallo-beta-lactamase superfamily
QR90_RS06115	SM00822	QR90_RS06115
QR90_RS06130	SM01329	QR90_RS06130
QR90_RS06180	SM00998	Adenylosuccinate lyase C-terminus
QR90_RS06195	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06200	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06210	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06220	SM00838	Elongation factor G C-terminus
QR90_RS06230	SM00244	prohibitin homologues
QR90_RS06245	SM00769	Water Stress and Hypersensitive response
QR90_RS06255	SM00854	Bacterial capsule synthesis protein PGA_cap
QR90_RS06260	SM01325	QR90_RS06260
QR90_RS06290	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06295	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06310	SM01060	QR90_RS06310
QR90_RS06320	SM01018	B12 binding domain
QR90_RS06340	SM00220	Serine/Threonine protein kinases, catalytic domain
QR90_RS06345	SM00642	Alpha-amylase domain
QR90_RS06365	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06365	SM01086	C-terminal, D2-small domain, of ClpB protein
QR90_RS06375	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06410	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06415	SM00100	Cyclic nucleotide-monophosphate binding domain
QR90_RS06415	SM00419	helix_turn_helix, cAMP Regulatory protein
QR90_RS06430	SM00316	Ribosomal protein S1-like RNA-binding domain
QR90_RS06430	SM00322	K homology RNA-binding domain
QR90_RS06465	SM00422	helix_turn_helix, mercury resistance
QR90_RS06505	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06530	SM00946	Prolyl-tRNA synthetase, C-terminal
QR90_RS06555	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06570	SM00387	Histidine kinase-like ATPases
QR90_RS06575	SM00421	helix_turn_helix, Lux Regulon
QR90_RS06575	SM00448	cheY-homologous receiver domain
QR90_RS06580	SM00028	Tetratricopeptide repeats
QR90_RS06595	SM00857	Resolvase, N terminal domain
QR90_RS06655	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06820	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS06855	SM00644	QR90_RS06855
QR90_RS06895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS06925	SM00257	Lysin motif
QR90_RS06955	SM00382	ATPases associated with a variety of cellular activities
QR90_RS06955	SM00464	Found in ATP-dependent protease La (LON)
QR90_RS06970	SM00563	Phosphate acyltransferases
QR90_RS06980	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07005	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07030	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07160	SM00852	Probable molybdopterin binding domain
QR90_RS07230	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
QR90_RS07230	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
QR90_RS07230	SM00493	QR90_RS07230
QR90_RS07285	SM00028	Tetratricopeptide repeats
QR90_RS07285	SM01043	Bacterial transcriptional activator domain
QR90_RS07290	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07295	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07330	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07330	SM00962	SRP54-type protein, GTPase domain
QR90_RS07330	SM00963	SRP54-type protein, helical bundle domain
QR90_RS07345	SM00487	DEAD-like helicases superfamily
QR90_RS07345	SM00490	helicase superfamily c-terminal domain
QR90_RS07345	SM00982	QR90_RS07345
QR90_RS07345	SM01058	CarD-like/TRCF domain
QR90_RS07360	SM00450	Rhodanese Homology Domain
QR90_RS07385	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07390	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07505	SM00899	QR90_RS07505
QR90_RS07545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
QR90_RS07545	SM00387	Histidine kinase-like ATPases
QR90_RS07550	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07550	SM00962	SRP54-type protein, GTPase domain
QR90_RS07550	SM00963	SRP54-type protein, helical bundle domain
QR90_RS07560	SM00100	Cyclic nucleotide-monophosphate binding domain
QR90_RS07560	SM00419	helix_turn_helix, cAMP Regulatory protein
QR90_RS07620	SM00822	QR90_RS07620
QR90_RS07690	SM00849	Metallo-beta-lactamase superfamily
QR90_RS07725	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS07735	SM00740	QR90_RS07735
QR90_RS07740	SM00882	Coenzyme A transferase
QR90_RS07745	SM00882	Coenzyme A transferase
QR90_RS07760	SM00506	Appr-1"-p processing enzyme
QR90_RS07765	SM00072	Guanylate kinase homologues.
QR90_RS07775	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07785	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
QR90_RS07845	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
QR90_RS07890	SM00354	helix_turn _helix lactose operon repressor
QR90_RS07895	SM00014	Acid phosphatase homologues
QR90_RS07910	SM00465	GIY-YIG type nucleases (URI domain)
QR90_RS07920	SM00855	Phosphoglycerate mutase family
QR90_RS07945	SM00357	Cold shock protein domain
QR90_RS07945	SM00382	ATPases associated with a variety of cellular activities
QR90_RS07945	SM00959	Rho termination factor, N-terminal domain
QR90_RS07950	SM00257	Lysin motif
QR90_RS07955	SM00448	cheY-homologous receiver domain
QR90_RS07975	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
QR90_RS08020	SM00046	Diacylglycerol kinase catalytic domain (presumed)
QR90_RS08065	SM00881	CoA binding domain
QR90_RS08140	SM00046	Diacylglycerol kinase catalytic domain (presumed)
QR90_RS08155	SM00487	DEAD-like helicases superfamily
QR90_RS08155	SM00490	helicase superfamily c-terminal domain
QR90_RS08155	SM00847	Helicase associated domain (HA2)  Add an annotation
QR90_RS08160	SM00650	Ribosomal RNA adenine dimethylases
QR90_RS08175	SM01059	Chloramphenicol acetyltransferase
QR90_RS08180	SM00968	SMC proteins Flexible Hinge Domain
QR90_RS08185	SM00909	Sporulation and spore germination
QR90_RS08210	SM00822	QR90_RS08210
QR90_RS08245	SM00479	QR90_RS08245
QR90_RS08255	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
QR90_RS08255	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
QR90_RS08315	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS08335	SM00342	helix_turn_helix, arabinose operon control protein
QR90_RS08340	SM00486	DNA polymerase type-B family
QR90_RS08400	SM00740	QR90_RS08400
QR90_RS08420	SM00849	Metallo-beta-lactamase superfamily
QR90_RS08420	SM00894	Excalibur calcium-binding domain
QR90_RS08425	SM00487	DEAD-like helicases superfamily
QR90_RS08425	SM00490	helicase superfamily c-terminal domain
QR90_RS08495	SM01150	QR90_RS08495
QR90_RS08505	SM00487	DEAD-like helicases superfamily
QR90_RS08505	SM00490	helicase superfamily c-terminal domain
QR90_RS08525	SM00327	von Willebrand factor (vWF) type A domain
QR90_RS08545	SM00487	DEAD-like helicases superfamily
QR90_RS08545	SM00490	helicase superfamily c-terminal domain
QR90_RS08585	SM00487	DEAD-like helicases superfamily
QR90_RS08585	SM00490	helicase superfamily c-terminal domain
QR90_RS08590	SM00487	DEAD-like helicases superfamily
QR90_RS08590	SM00490	helicase superfamily c-terminal domain
QR90_RS08670	SM00487	DEAD-like helicases superfamily
QR90_RS08695	SM00490	helicase superfamily c-terminal domain
QR90_RS08775	SM00382	ATPases associated with a variety of cellular activities
QR90_RS08780	SM00327	von Willebrand factor (vWF) type A domain
QR90_RS08790	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
QR90_RS08890	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS08920	SM00382	ATPases associated with a variety of cellular activities
QR90_RS08925	SM00382	ATPases associated with a variety of cellular activities
QR90_RS09005	SM01350	QR90_RS09005
QR90_RS09015	SM00347	helix_turn_helix multiple antibiotic resistance protein
QR90_RS09030	SM00849	Metallo-beta-lactamase superfamily
QR90_RS09045	SM00967	RNA 2'-O ribose methyltransferase substrate binding
QR90_RS09070	SM00327	von Willebrand factor (vWF) type A domain
QR90_RS09080	SM00341	Helicase and RNase D C-terminal
QR90_RS09105	SM00382	ATPases associated with a variety of cellular activities
QR90_RS09135	SM01350	QR90_RS09135
QR90_RS09155	SM00267	diguanylate cyclase
QR90_RS09165	SM00710	Parallel beta-helix repeats
QR90_RS09330	SM00977	TilS substrate C-terminal domain
QR90_RS09340	SM00904	Riboflavin kinase
QR90_RS09365	SM00382	ATPases associated with a variety of cellular activities
QR90_RS09380	SM00830	Chorismate mutase type II
QR90_RS09415	SM00346	helix_turn_helix isocitrate lyase regulation
QR90_RS09465	SM00382	ATPases associated with a variety of cellular activities
QR90_RS09470	SM00014	Acid phosphatase homologues
QR90_RS09540	SM00448	cheY-homologous receiver domain
QR90_RS09540	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS09570	SM00873	B3/4 domain
QR90_RS09570	SM00874	tRNA synthetase B5 domain
QR90_RS09570	SM00896	Ferredoxin-fold anticodon binding domain
QR90_RS09600	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS09615	SM00822	QR90_RS09615
QR90_RS09630	SM00646	QR90_RS09630
QR90_RS09635	SM00954	Region found in RelA / SpoT proteins
QR90_RS09640	SM00487	DEAD-like helicases superfamily
QR90_RS09640	SM00490	helicase superfamily c-terminal domain
QR90_RS09720	SM00966	SpoVT / AbrB like domain 
QR90_RS09745	SM00829	Enoylreductase
QR90_RS09780	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS09835	SM00245	tail specific protease
QR90_RS09850	SM00448	cheY-homologous receiver domain
QR90_RS09850	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS09855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
QR90_RS09855	SM00387	Histidine kinase-like ATPases
QR90_RS09855	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS09880	SM00382	ATPases associated with a variety of cellular activities
QR90_RS09910	SM00014	Acid phosphatase homologues
QR90_RS10000	SM00404	Protein tyrosine phosphatase, catalytic domain motif
QR90_RS10005	SM01004	Delta-aminolevulinic acid dehydratase
QR90_RS10100	SM00347	helix_turn_helix multiple antibiotic resistance protein
QR90_RS10125	SM00849	Metallo-beta-lactamase superfamily
QR90_RS10150	SM01092	CO dehydrogenase flavoprotein C-terminal domain
QR90_RS10155	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
QR90_RS10185	SM00062	Bacterial periplasmic substrate-binding proteins
QR90_RS10185	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
QR90_RS10205	SM00642	Alpha-amylase domain
QR90_RS10320	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
QR90_RS10320	SM00475	5'-3' exonuclease
QR90_RS10320	SM00482	DNA polymerase A domain
QR90_RS10345	SM00935	Outer membrane protein (OmpH-like)
QR90_RS10350	SM00935	Outer membrane protein (OmpH-like)
QR90_RS10355	SM00116	Domain in cystathionine beta-synthase and other proteins.
QR90_RS10440	SM00849	Metallo-beta-lactamase superfamily
QR90_RS10445	SM00382	ATPases associated with a variety of cellular activities
QR90_RS10450	SM00382	ATPases associated with a variety of cellular activities
QR90_RS10475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS10475	SM00895	QR90_RS10475
QR90_RS10480	SM00642	Alpha-amylase domain
QR90_RS10530	SM00382	ATPases associated with a variety of cellular activities
QR90_RS10535	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS10555	SM00478	endonuclease III
QR90_RS10555	SM00525	QR90_RS10555
QR90_RS10560	SM00729	Elongator protein 3, MiaB family, Radical SAM
QR90_RS10570	SM00267	diguanylate cyclase
QR90_RS10570	SM01080	QR90_RS10570
QR90_RS10580	SM00382	ATPases associated with a variety of cellular activities
QR90_RS10600	SM00947	Carbonic anhydrase
QR90_RS10690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS10710	SM00244	prohibitin homologues
QR90_RS10715	SM00382	ATPases associated with a variety of cellular activities
QR90_RS10750	SM00248	ankyrin repeats
QR90_RS10795	SM00382	ATPases associated with a variety of cellular activities
QR90_RS10810	SM00316	Ribosomal protein S1-like RNA-binding domain
QR90_RS10865	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS10865	SM00245	tail specific protease
QR90_RS10885	SM00316	Ribosomal protein S1-like RNA-binding domain
QR90_RS10895	SM00642	Alpha-amylase domain
QR90_RS10900	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
QR90_RS10905	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
QR90_RS10920	SM00100	Cyclic nucleotide-monophosphate binding domain
QR90_RS10950	SM00155	Phospholipase D. Active site motifs.
QR90_RS11070	SM00448	cheY-homologous receiver domain
QR90_RS11075	SM00387	Histidine kinase-like ATPases
QR90_RS11160	SM00903	Flavin reductase like domain
QR90_RS11170	SM00257	Lysin motif
QR90_RS11210	SM00028	Tetratricopeptide repeats
QR90_RS11240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS11250	SM00852	Probable molybdopterin binding domain
QR90_RS11420	SM00028	Tetratricopeptide repeats
QR90_RS11420	SM00267	diguanylate cyclase
QR90_RS11435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
QR90_RS11450	SM00244	prohibitin homologues
QR90_RS11525	SM00859	Semialdehyde dehydrogenase, NAD binding domain
QR90_RS11555	SM00028	Tetratricopeptide repeats
QR90_RS11560	SM01329	QR90_RS11560
QR90_RS11600	SM00855	Phosphoglycerate mutase family
QR90_RS11615	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
QR90_RS11635	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS11645	SM00487	DEAD-like helicases superfamily
QR90_RS11645	SM00490	helicase superfamily c-terminal domain
QR90_RS11665	SM00357	Cold shock protein domain
QR90_RS11690	SM00267	diguanylate cyclase
QR90_RS11690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
QR90_RS11755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS11755	SM00895	QR90_RS11755
QR90_RS11805	SM01264	QR90_RS11805
QR90_RS11820	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
QR90_RS11820	SM00267	diguanylate cyclase
QR90_RS11845	SM00382	ATPases associated with a variety of cellular activities
QR90_RS11855	SM00870	QR90_RS11855
QR90_RS11875	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
QR90_RS11910	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS11915	SM00642	Alpha-amylase domain
QR90_RS11935	SM00382	ATPases associated with a variety of cellular activities
QR90_RS11940	SM00855	Phosphoglycerate mutase family
QR90_RS11955	SM00798	AICARFT/IMPCHase bienzyme
QR90_RS11955	SM00851	MGS-like domain
QR90_RS12030	SM00382	ATPases associated with a variety of cellular activities
QR90_RS12065	SM00257	Lysin motif
QR90_RS12065	SM00749	bacterial OsmY and nodulation domain
QR90_RS12080	SM00450	Rhodanese Homology Domain
QR90_RS12150	SM00421	helix_turn_helix, Lux Regulon
QR90_RS12190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS12200	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
QR90_RS12220	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
QR90_RS12220	SM00387	Histidine kinase-like ATPases
QR90_RS12220	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS12230	SM00460	Transglutaminase/protease-like homologues
QR90_RS12265	SM00838	Elongation factor G C-terminus
QR90_RS12290	SM00957	SecA DEAD-like domain
QR90_RS12290	SM00958	SecA preprotein cross-linking domain
QR90_RS12300	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
QR90_RS12300	SM01232	QR90_RS12300
QR90_RS12320	SM00829	Enoylreductase
QR90_RS12465	SM00840	QR90_RS12465
QR90_RS12480	SM00422	helix_turn_helix, mercury resistance
QR90_RS12490	SM00642	Alpha-amylase domain
QR90_RS12500	SM01130	QR90_RS12500
QR90_RS12525	SM00342	helix_turn_helix, arabinose operon control protein
QR90_RS12550	SM01001	AIR carboxylase
QR90_RS12600	SM01387	QR90_RS12600
QR90_RS12620	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS12650	SM00984	UDP binding domain
QR90_RS12840	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
QR90_RS12840	SM00534	ATPase domain of DNA mismatch repair MUTS family
QR90_RS12865	SM00387	Histidine kinase-like ATPases
QR90_RS12865	SM00433	TopoisomeraseII
QR90_RS12875	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS12875	SM00954	Region found in RelA / SpoT proteins
QR90_RS12890	SM00387	Histidine kinase-like ATPases
QR90_RS12900	SM00421	helix_turn_helix, Lux Regulon
QR90_RS12900	SM00448	cheY-homologous receiver domain
QR90_RS12930	SM00267	diguanylate cyclase
QR90_RS12935	SM00562	QR90_RS12935
QR90_RS12955	SM00400	zinc finger
QR90_RS12955	SM00493	QR90_RS12955
QR90_RS12980	SM00116	Domain in cystathionine beta-synthase and other proteins.
QR90_RS13175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
QR90_RS13175	SM00387	Histidine kinase-like ATPases
QR90_RS13175	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS13180	SM00448	cheY-homologous receiver domain
QR90_RS13180	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS13250	SM00244	prohibitin homologues
QR90_RS13255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS13345	SM00327	von Willebrand factor (vWF) type A domain
QR90_RS13400	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS13440	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
QR90_RS13445	SM00861	Transketolase, pyrimidine binding domain
QR90_RS13470	SM00387	Histidine kinase-like ATPases
QR90_RS13485	SM00354	helix_turn _helix lactose operon repressor
QR90_RS13520	SM00529	Helix-turn-helix diphteria tox regulatory element
QR90_RS13520	SM00899	QR90_RS13520
QR90_RS13545	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
QR90_RS13565	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
QR90_RS13570	SM00382	ATPases associated with a variety of cellular activities
QR90_RS13570	SM00843	QR90_RS13570
QR90_RS13660	SM00327	von Willebrand factor (vWF) type A domain
QR90_RS13730	SM00220	Serine/Threonine protein kinases, catalytic domain
QR90_RS13750	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS13750	SM00245	tail specific protease
QR90_RS13755	SM00878	Biotin carboxylase C-terminal domain
QR90_RS13765	SM00346	helix_turn_helix isocitrate lyase regulation
QR90_RS13785	SM00829	Enoylreductase
QR90_RS13855	SM00382	ATPases associated with a variety of cellular activities
QR90_RS13880	SM00853	MutL C terminal dimerisation domain
QR90_RS13880	SM01340	QR90_RS13880
QR90_RS13900	SM00564	beta-propeller repeat
QR90_RS13915	SM00382	ATPases associated with a variety of cellular activities
QR90_RS13940	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
QR90_RS13955	SM00822	QR90_RS13955
QR90_RS13965	SM00825	Beta-ketoacyl synthase
QR90_RS13980	SM00422	helix_turn_helix, mercury resistance
QR90_RS14060	SM00859	Semialdehyde dehydrogenase, NAD binding domain
QR90_RS14085	SM00422	helix_turn_helix, mercury resistance
QR90_RS14100	SM00487	DEAD-like helicases superfamily
QR90_RS14100	SM00490	helicase superfamily c-terminal domain
QR90_RS14105	SM00710	Parallel beta-helix repeats
QR90_RS14130	SM00450	Rhodanese Homology Domain
QR90_RS14155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS14225	SM00091	PAS domain
QR90_RS14230	SM00052	Putative diguanylate phosphodiesterase
QR90_RS14230	SM00267	diguanylate cyclase
QR90_RS14250	SM00448	cheY-homologous receiver domain
QR90_RS14250	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS14250	SM01043	Bacterial transcriptional activator domain
QR90_RS14255	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS14265	SM00450	Rhodanese Homology Domain
QR90_RS14315	SM00448	cheY-homologous receiver domain
QR90_RS14315	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS14320	SM00387	Histidine kinase-like ATPases
QR90_RS14320	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS14340	SM00478	endonuclease III
QR90_RS14340	SM00525	QR90_RS14340
QR90_RS14385	SM00563	Phosphate acyltransferases
QR90_RS14505	SM00382	ATPases associated with a variety of cellular activities
QR90_RS14520	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
QR90_RS14570	SM00861	Transketolase, pyrimidine binding domain
QR90_RS14575	SM00487	DEAD-like helicases superfamily
QR90_RS14575	SM00490	helicase superfamily c-terminal domain
QR90_RS14620	SM01211	QR90_RS14620
QR90_RS14660	SM00116	Domain in cystathionine beta-synthase and other proteins.
QR90_RS14660	SM01240	QR90_RS14660
QR90_RS14685	SM00382	ATPases associated with a variety of cellular activities
QR90_RS14690	SM00382	ATPases associated with a variety of cellular activities
QR90_RS14690	SM00464	Found in ATP-dependent protease La (LON)
QR90_RS14695	SM00382	ATPases associated with a variety of cellular activities
QR90_RS14695	SM00994	ClpX C4-type zinc finger
QR90_RS14695	SM01086	C-terminal, D2-small domain, of ClpB protein
QR90_RS14710	SM00422	helix_turn_helix, mercury resistance
QR90_RS14710	SM00871	Bacterial transcription activator, effector binding domain
QR90_RS14715	SM00849	Metallo-beta-lactamase superfamily
QR90_RS14720	SM00448	cheY-homologous receiver domain
QR90_RS14720	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS14725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
QR90_RS14725	SM00091	PAS domain
QR90_RS14725	SM00387	Histidine kinase-like ATPases
QR90_RS14725	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS14730	SM00448	cheY-homologous receiver domain
QR90_RS14740	SM00507	HNH nucleases
QR90_RS14780	SM00822	QR90_RS14780
QR90_RS14830	SM00849	Metallo-beta-lactamase superfamily
QR90_RS14875	SM00382	ATPases associated with a variety of cellular activities
QR90_RS14890	SM00382	ATPases associated with a variety of cellular activities
QR90_RS15000	SM00363	S4 RNA-binding domain
QR90_RS15045	SM00382	ATPases associated with a variety of cellular activities
QR90_RS15095	SM00460	Transglutaminase/protease-like homologues
QR90_RS15125	SM00320	WD40 repeats
QR90_RS15150	SM00984	UDP binding domain
QR90_RS15160	SM00612	QR90_RS15160
QR90_RS15160	SM00776	QR90_RS15160
QR90_RS15175	SM00776	QR90_RS15175
QR90_RS15235	SM00905	Dihydroneopterin aldolase
QR90_RS15260	SM00937	QR90_RS15260
QR90_RS15265	SM00220	Serine/Threonine protein kinases, catalytic domain
QR90_RS15275	SM00530	Helix-turn-helix XRE-family like proteins 
QR90_RS15325	SM00894	Excalibur calcium-binding domain
QR90_RS15360	SM00382	ATPases associated with a variety of cellular activities
QR90_RS15365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
QR90_RS15365	SM00245	tail specific protease
QR90_RS15395	SM00322	K homology RNA-binding domain
QR90_RS15395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS15400	SM00481	DNA polymerase alpha chain like domain
QR90_RS15405	SM00046	Diacylglycerol kinase catalytic domain (presumed)
QR90_RS15420	SM00966	SpoVT / AbrB like domain 
QR90_RS15460	SM00387	Histidine kinase-like ATPases
QR90_RS15460	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS15500	SM00382	ATPases associated with a variety of cellular activities
QR90_RS15565	SM00347	helix_turn_helix multiple antibiotic resistance protein
QR90_RS15590	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
QR90_RS15605	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
QR90_RS15635	SM00100	Cyclic nucleotide-monophosphate binding domain
QR90_RS15635	SM00419	helix_turn_helix, cAMP Regulatory protein
QR90_RS15715	SM00382	ATPases associated with a variety of cellular activities
QR90_RS15720	SM00382	ATPases associated with a variety of cellular activities
QR90_RS15740	SM00849	Metallo-beta-lactamase superfamily
QR90_RS15755	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS15805	SM01005	Alanine racemase, C-terminal domain
QR90_RS15835	SM00478	endonuclease III
QR90_RS15840	SM00903	Flavin reductase like domain
QR90_RS15850	SM00487	DEAD-like helicases superfamily
QR90_RS15850	SM00490	helicase superfamily c-terminal domain
QR90_RS15875	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS15875	SM01043	Bacterial transcriptional activator domain
QR90_RS15980	SM00663	RNA polymerase I subunit A N-terminus
QR90_RS16010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS16010	SM00895	QR90_RS16010
QR90_RS16015	SM00822	QR90_RS16015
QR90_RS16045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS16050	SM00382	ATPases associated with a variety of cellular activities
QR90_RS16055	SM00382	ATPases associated with a variety of cellular activities
QR90_RS16125	SM00937	QR90_RS16125
QR90_RS16155	SM00960	Roadblock/LC7 domain
QR90_RS16165	SM00822	QR90_RS16165
QR90_RS16205	SM00346	helix_turn_helix isocitrate lyase regulation
QR90_RS16230	SM00919	Malic enzyme, NAD binding domain
QR90_RS16230	SM01274	QR90_RS16230
QR90_RS16245	SM00382	ATPases associated with a variety of cellular activities
QR90_RS16245	SM01024	QR90_RS16245
QR90_RS16250	SM00100	Cyclic nucleotide-monophosphate binding domain
QR90_RS16250	SM00419	helix_turn_helix, cAMP Regulatory protein
QR90_RS16260	SM00448	cheY-homologous receiver domain
QR90_RS16285	SM00788	Adenylosuccinate synthetase
QR90_RS16310	SM00358	Double-stranded RNA binding motif
QR90_RS16360	SM00710	Parallel beta-helix repeats
QR90_RS16360	SM00776	QR90_RS16360
QR90_RS16450	SM00470	ParB-like nuclease domain
QR90_RS16470	SM01228	QR90_RS16470
QR90_RS16485	SM00861	Transketolase, pyrimidine binding domain
QR90_RS16505	SM00448	cheY-homologous receiver domain
QR90_RS16505	SM00862	Transcriptional regulatory protein, C terminal
QR90_RS16510	SM00387	Histidine kinase-like ATPases
QR90_RS16535	SM00267	diguanylate cyclase
QR90_RS16540	SM00267	diguanylate cyclase
QR90_RS16555	SM00052	Putative diguanylate phosphodiesterase
QR90_RS16555	SM00267	diguanylate cyclase
QR90_RS16560	SM00052	Putative diguanylate phosphodiesterase
QR90_RS16560	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
QR90_RS16560	SM00091	PAS domain
QR90_RS16560	SM00267	diguanylate cyclase
QR90_RS16570	SM01120	QR90_RS16570
QR90_RS16575	SM00028	Tetratricopeptide repeats
QR90_RS16575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
QR90_RS16600	SM00267	diguanylate cyclase
QR90_RS16605	SM00986	Uracil DNA glycosylase superfamily
QR90_RS16605	SM00987	UreE urease accessory protein, C-terminal domain 
QR90_RS16620	SM00749	bacterial OsmY and nodulation domain
QR90_RS16700	SM00882	Coenzyme A transferase
QR90_RS16705	SM00882	Coenzyme A transferase
QR90_RS16725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
QR90_RS16730	SM00028	Tetratricopeptide repeats
QR90_RS16795	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
QR90_RS16795	SM00267	diguanylate cyclase
QR90_RS16830	SM00267	diguanylate cyclase
QR90_RS16840	SM00387	Histidine kinase-like ATPases
QR90_RS16840	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS16850	SM00347	helix_turn_helix multiple antibiotic resistance protein
QR90_RS16855	SM00387	Histidine kinase-like ATPases
QR90_RS16855	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS16870	SM00387	Histidine kinase-like ATPases
QR90_RS16870	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS16890	SM00267	diguanylate cyclase
QR90_RS16900	SM00776	QR90_RS16900
QR90_RS16905	SM00776	QR90_RS16905
QR90_RS16945	SM00776	QR90_RS16945
QR90_RS16965	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
QR90_RS16965	SM00091	PAS domain
QR90_RS16965	SM00387	Histidine kinase-like ATPases
QR90_RS16965	SM00388	His Kinase A (phosphoacceptor) domain
QR90_RS16965	SM01079	QR90_RS16965
QR90_RS16970	SM00052	Putative diguanylate phosphodiesterase
QR90_RS16970	SM00267	diguanylate cyclase
QR90_RS16975	SM00116	Domain in cystathionine beta-synthase and other proteins.
QR90_RS16985	SM00448	cheY-homologous receiver domain
