locus-tag class description DESAF_RS00005 PF11638 DnaA N-terminal domain DESAF_RS00005 PF00308 Bacterial dnaA protein DESAF_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DESAF_RS00015 PF02511 Thymidylate synthase complementing protein DESAF_RS00020 PF05496 Holliday junction DNA helicase RuvB P-loop domain DESAF_RS00020 PF05491 RuvB C-terminal winged helix domain DESAF_RS00020 PF17864 RuvB AAA lid domain DESAF_RS00025 PF01330 RuvA N terminal domain DESAF_RS00025 PF07499 RuvA, C-terminal domain DESAF_RS00030 PF02075 Crossover junction endodeoxyribonuclease RuvC DESAF_RS00035 PF01709 Transcriptional regulator DESAF_RS00040 PF01728 FtsJ-like methyltransferase DESAF_RS00075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DESAF_RS00075 PF00384 Molybdopterin oxidoreductase DESAF_RS00075 PF01568 Molydopterin dinucleotide binding domain DESAF_RS00095 PF01339 CheB methylesterase DESAF_RS00095 PF00072 Response regulator receiver domain DESAF_RS00115 PF00535 Glycosyl transferase family 2 DESAF_RS00125 PF00535 Glycosyl transferase family 2 DESAF_RS00140 PF01979 Amidohydrolase family DESAF_RS00150 PF02774 Semialdehyde dehydrogenase, dimerisation domain DESAF_RS00150 PF01118 Semialdehyde dehydrogenase, NAD binding domain DESAF_RS00155 PF02219 Methylenetetrahydrofolate reductase DESAF_RS00160 PF00293 NUDIX domain DESAF_RS00170 PF00005 ABC transporter DESAF_RS00170 PF12848 ABC transporter DESAF_RS00180 PF01209 ubiE/COQ5 methyltransferase family DESAF_RS00195 PF01467 Cytidylyltransferase-like DESAF_RS00200 PF00171 Aldehyde dehydrogenase family DESAF_RS00220 PF02954 Bacterial regulatory protein, Fis family DESAF_RS00220 PF01590 GAF domain DESAF_RS00220 PF00158 Sigma-54 interaction domain DESAF_RS00235 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DESAF_RS00235 PF00749 tRNA synthetases class I (E and Q), catalytic domain DESAF_RS00240 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DESAF_RS00255 PF01063 Amino-transferase class IV DESAF_RS00260 PF13847 Methyltransferase domain DESAF_RS00275 PF00892 EamA-like transporter family DESAF_RS00290 PF12833 Helix-turn-helix domain DESAF_RS00305 PF01758 Sodium Bile acid symporter family DESAF_RS00315 PF03772 Competence protein DESAF_RS00315 PF13567 Domain of unknown function (DUF4131) DESAF_RS00315 PF00753 Metallo-beta-lactamase superfamily DESAF_RS00330 PF00691 OmpA family DESAF_RS00335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DESAF_RS00350 PF09106 Elongation factor SelB, winged helix DESAF_RS00350 PF00009 Elongation factor Tu GTP binding domain DESAF_RS00350 PF03144 Elongation factor Tu domain 2 DESAF_RS00350 PF09107 Elongation factor SelB, winged helix DESAF_RS00355 PF02127 Aminopeptidase I zinc metalloprotease (M18) DESAF_RS00360 PF12390 Selenocysteine synthase N terminal DESAF_RS00360 PF03841 L-seryl-tRNA selenium transferase DESAF_RS00365 PF08245 Mur ligase middle domain DESAF_RS00365 PF02875 Mur ligase family, glutamate ligase domain DESAF_RS00370 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DESAF_RS00370 PF07228 Stage II sporulation protein E (SpoIIE) DESAF_RS00405 PF13416 Bacterial extracellular solute-binding protein DESAF_RS00410 PF00005 ABC transporter DESAF_RS00410 PF08402 TOBE domain DESAF_RS00425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DESAF_RS00425 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS00430 PF00723 Glycosyl hydrolases family 15 DESAF_RS00435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DESAF_RS00435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DESAF_RS00440 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DESAF_RS00440 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DESAF_RS00445 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DESAF_RS00445 PF02779 Transketolase, pyrimidine binding domain DESAF_RS00445 PF02780 Transketolase, C-terminal domain DESAF_RS00450 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DESAF_RS00470 PF12848 ABC transporter DESAF_RS00470 PF00005 ABC transporter DESAF_RS00495 PF00890 FAD binding domain DESAF_RS00495 PF02910 Fumarate reductase flavoprotein C-term DESAF_RS00500 PF00939 Sodium:sulfate symporter transmembrane region DESAF_RS00510 PF00118 TCP-1/cpn60 chaperonin family DESAF_RS00515 PF00166 Chaperonin 10 Kd subunit DESAF_RS00530 PF00155 Aminotransferase class I and II DESAF_RS00530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DESAF_RS00530 PF07685 CobB/CobQ-like glutamine amidotransferase domain DESAF_RS00535 PF05443 ROS/MUCR transcriptional regulator protein DESAF_RS00540 PF00571 CBS domain DESAF_RS00540 PF01380 SIS domain DESAF_RS00545 PF00156 Phosphoribosyl transferase domain DESAF_RS00555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DESAF_RS00555 PF02142 MGS-like domain DESAF_RS00555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DESAF_RS00560 PF00491 Arginase family DESAF_RS00580 PF01311 Bacterial export proteins, family 1 DESAF_RS00585 PF01312 FlhB HrpN YscU SpaS Family DESAF_RS00590 PF00771 FHIPEP family DESAF_RS00595 PF00448 SRP54-type protein, GTPase domain DESAF_RS00600 PF10609 NUBPL iron-transfer P-loop NTPase DESAF_RS00605 PF04539 Sigma-70 region 3 DESAF_RS00605 PF04545 Sigma-70, region 4 DESAF_RS00605 PF04542 Sigma-70 region 2 DESAF_RS00610 PF00072 Response regulator receiver domain DESAF_RS00635 PF01207 Dihydrouridine synthase (Dus) DESAF_RS00640 PF00072 Response regulator receiver domain DESAF_RS00640 PF01584 CheW-like domain DESAF_RS00645 PF02769 AIR synthase related protein, C-terminal domain DESAF_RS00645 PF00586 AIR synthase related protein, N-terminal domain DESAF_RS00650 PF01924 Hydrogenase formation hypA family DESAF_RS00655 PF01455 HupF/HypC family DESAF_RS00660 PF04461 Protein of unknown function (DUF520) DESAF_RS00675 PF07478 D-ala D-ala ligase C-terminus DESAF_RS00675 PF01820 D-ala D-ala ligase N-terminus DESAF_RS00680 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DESAF_RS00680 PF02390 Putative methyltransferase DESAF_RS00685 PF02348 Cytidylyltransferase DESAF_RS00690 PF00117 Glutamine amidotransferase class-I DESAF_RS00690 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DESAF_RS00700 PF08666 SAF domain DESAF_RS00700 PF03102 NeuB family DESAF_RS00710 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DESAF_RS00715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DESAF_RS00715 PF02806 Alpha amylase, C-terminal all-beta domain DESAF_RS00715 PF00128 Alpha amylase, catalytic domain DESAF_RS00725 PF00534 Glycosyl transferases group 1 DESAF_RS00725 PF08323 Starch synthase catalytic domain DESAF_RS00730 PF00293 NUDIX domain DESAF_RS00740 PF01300 Telomere recombination DESAF_RS00745 PF00588 SpoU rRNA Methylase family DESAF_RS00745 PF12105 SpoU, rRNA methylase, C-terminal DESAF_RS00750 PF06180 Cobalt chelatase (CbiK) DESAF_RS00755 PF01032 FecCD transport family DESAF_RS00760 PF00005 ABC transporter DESAF_RS00765 PF01497 Periplasmic binding protein DESAF_RS00770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DESAF_RS00775 PF00202 Aminotransferase class-III DESAF_RS00780 PF00692 dUTPase DESAF_RS00785 PF11897 Protein of unknown function (DUF3417) DESAF_RS00785 PF00343 Carbohydrate phosphorylase DESAF_RS00790 PF01965 DJ-1/PfpI family DESAF_RS00795 PF13426 PAS domain DESAF_RS00795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS00795 PF00672 HAMP domain DESAF_RS00800 PF13801 Heavy-metal resistance DESAF_RS00805 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DESAF_RS00815 PF00708 Acylphosphatase DESAF_RS00815 PF17788 HypF Kae1-like domain DESAF_RS00815 PF01300 Telomere recombination DESAF_RS00815 PF07503 HypF finger DESAF_RS00820 PF00690 Cation transporter/ATPase, N-terminus DESAF_RS00820 PF00689 Cation transporting ATPase, C-terminus DESAF_RS00835 PF01641 SelR domain DESAF_RS00845 PF01557 Fumarylacetoacetate (FAA) hydrolase family DESAF_RS00850 PF00318 Ribosomal protein S2 DESAF_RS00855 PF00889 Elongation factor TS DESAF_RS00860 PF00696 Amino acid kinase family DESAF_RS00865 PF01765 Ribosome recycling factor DESAF_RS00870 PF01255 Putative undecaprenyl diphosphate synthase DESAF_RS00875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DESAF_RS00880 PF12801 4Fe-4S binding domain DESAF_RS00890 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS00890 PF17151 Periplasmic sensor domain DESAF_RS00895 PF00690 Cation transporter/ATPase, N-terminus DESAF_RS00895 PF00689 Cation transporting ATPase, C-terminus DESAF_RS00905 PF01609 Transposase DDE domain DESAF_RS00910 PF02401 LytB protein DESAF_RS00925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DESAF_RS00925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DESAF_RS00935 PF13249 Squalene-hopene cyclase N-terminal domain DESAF_RS00935 PF13243 Squalene-hopene cyclase C-terminal domain DESAF_RS00955 PF16363 GDP-mannose 4,6 dehydratase DESAF_RS00970 PF01258 Prokaryotic dksA/traR C4-type zinc finger DESAF_RS00985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DESAF_RS00985 PF00437 Type II/IV secretion system protein DESAF_RS00990 PF00482 Type II secretion system (T2SS), protein F DESAF_RS00995 PF08334 Type II secretion system (T2SS), protein G DESAF_RS00995 PF07963 Prokaryotic N-terminal methylation motif DESAF_RS01015 PF03934 Type II secretion system (T2SS), protein K DESAF_RS01030 PF03958 Bacterial type II/III secretion system short domain DESAF_RS01030 PF00263 Bacterial type II and III secretion system protein DESAF_RS01035 PF00271 Helicase conserved C-terminal domain DESAF_RS01035 PF16124 RecQ zinc-binding DESAF_RS01035 PF00570 HRDC domain DESAF_RS01035 PF09382 RQC domain DESAF_RS01035 PF00270 DEAD/DEAH box helicase DESAF_RS01055 PF02470 MlaD protein DESAF_RS01060 PF00005 ABC transporter DESAF_RS01065 PF02405 Permease MlaE DESAF_RS01075 PF02462 Opacity family porin protein DESAF_RS01080 PF09335 SNARE associated Golgi protein DESAF_RS01085 PF04983 RNA polymerase Rpb1, domain 3 DESAF_RS01085 PF00623 RNA polymerase Rpb1, domain 2 DESAF_RS01085 PF04997 RNA polymerase Rpb1, domain 1 DESAF_RS01085 PF04998 RNA polymerase Rpb1, domain 5 DESAF_RS01085 PF05000 RNA polymerase Rpb1, domain 4 DESAF_RS01090 PF04561 RNA polymerase Rpb2, domain 2 DESAF_RS01090 PF04563 RNA polymerase beta subunit DESAF_RS01090 PF04565 RNA polymerase Rpb2, domain 3 DESAF_RS01090 PF00562 RNA polymerase Rpb2, domain 6 DESAF_RS01090 PF04560 RNA polymerase Rpb2, domain 7 DESAF_RS01090 PF10385 RNA polymerase beta subunit external 1 domain DESAF_RS01095 PF16320 Ribosomal protein L7/L12 dimerisation domain DESAF_RS01095 PF00542 Ribosomal protein L7/L12 C-terminal domain DESAF_RS01100 PF00466 Ribosomal protein L10 DESAF_RS01105 PF00687 Ribosomal protein L1p/L10e family DESAF_RS01110 PF03946 Ribosomal protein L11, N-terminal domain DESAF_RS01110 PF00298 Ribosomal protein L11, RNA binding domain DESAF_RS01115 PF00467 KOW motif DESAF_RS01115 PF02357 Transcription termination factor nusG DESAF_RS01120 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DESAF_RS01130 PF00471 Ribosomal protein L33 DESAF_RS01135 PF00009 Elongation factor Tu GTP binding domain DESAF_RS01135 PF03143 Elongation factor Tu C-terminal domain DESAF_RS01135 PF03144 Elongation factor Tu domain 2 DESAF_RS01160 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DESAF_RS01165 PF17827 PrmC N-terminal domain DESAF_RS01165 PF13847 Methyltransferase domain DESAF_RS01170 PF03462 PCRF domain DESAF_RS01170 PF00472 RF-1 domain DESAF_RS01175 PF07136 Protein of unknown function (DUF1385) DESAF_RS01180 PF01197 Ribosomal protein L31 DESAF_RS01185 PF01964 Radical SAM ThiC family DESAF_RS01190 PF00300 Histidine phosphatase superfamily (branch 1) DESAF_RS01195 PF14815 NUDIX domain DESAF_RS01195 PF00730 HhH-GPD superfamily base excision DNA repair protein DESAF_RS01205 PF01915 Glycosyl hydrolase family 3 C-terminal domain DESAF_RS01205 PF00933 Glycosyl hydrolase family 3 N terminal domain DESAF_RS01210 PF00072 Response regulator receiver domain DESAF_RS01215 PF01180 Dihydroorotate dehydrogenase DESAF_RS01220 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DESAF_RS01225 PF01136 Peptidase family U32 DESAF_RS01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DESAF_RS01230 PF03466 LysR substrate binding domain DESAF_RS01240 PF00892 EamA-like transporter family DESAF_RS01245 PF01258 Prokaryotic dksA/traR C4-type zinc finger DESAF_RS01250 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase DESAF_RS01260 PF00912 Transglycosylase DESAF_RS01260 PF00905 Penicillin binding protein transpeptidase domain DESAF_RS01265 PF00483 Nucleotidyl transferase DESAF_RS01265 PF01050 Mannose-6-phosphate isomerase DESAF_RS01270 PF00970 Oxidoreductase FAD-binding domain DESAF_RS01270 PF00111 2Fe-2S iron-sulfur cluster binding domain DESAF_RS01270 PF00175 Oxidoreductase NAD-binding domain DESAF_RS01290 PF00731 AIR carboxylase DESAF_RS01295 PF07883 Cupin domain DESAF_RS01300 PF02843 Phosphoribosylglycinamide synthetase, C domain DESAF_RS01300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DESAF_RS01300 PF02844 Phosphoribosylglycinamide synthetase, N domain DESAF_RS01320 PF00793 DAHP synthetase I family DESAF_RS01325 PF02743 Cache domain DESAF_RS01325 PF00672 HAMP domain DESAF_RS01325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS01330 PF17755 UvrA DNA-binding domain DESAF_RS01330 PF17760 UvrA interaction domain DESAF_RS01350 PF03358 NADPH-dependent FMN reductase DESAF_RS01380 PF01625 Peptide methionine sulfoxide reductase DESAF_RS01395 PF01609 Transposase DDE domain DESAF_RS01405 PF01627 Hpt domain DESAF_RS01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS01405 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS01405 PF00989 PAS fold DESAF_RS01405 PF18415 Histidine kinase receptor ArcB trans-membrane domain DESAF_RS01405 PF00072 Response regulator receiver domain DESAF_RS01415 PF01435 Peptidase family M48 DESAF_RS01450 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS01455 PF00072 Response regulator receiver domain DESAF_RS01455 PF00158 Sigma-54 interaction domain DESAF_RS01455 PF02954 Bacterial regulatory protein, Fis family DESAF_RS01465 PF01790 Prolipoprotein diacylglyceryl transferase DESAF_RS01470 PF02254 TrkA-N domain DESAF_RS01470 PF02080 TrkA-C domain DESAF_RS01475 PF02386 Cation transport protein DESAF_RS01485 PF00072 Response regulator receiver domain DESAF_RS01485 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS01505 PF00072 Response regulator receiver domain DESAF_RS01505 PF13188 PAS domain DESAF_RS01505 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS01505 PF08448 PAS fold DESAF_RS01510 PF00005 ABC transporter DESAF_RS01510 PF12848 ABC transporter DESAF_RS01510 PF16326 ABC transporter C-terminal domain DESAF_RS01520 PF00456 Transketolase, thiamine diphosphate binding domain DESAF_RS01525 PF00923 Transaldolase/Fructose-6-phosphate aldolase DESAF_RS01530 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DESAF_RS01535 PF00174 Oxidoreductase molybdopterin binding domain DESAF_RS01540 PF04679 ATP dependent DNA ligase C terminal region DESAF_RS01540 PF01068 ATP dependent DNA ligase domain DESAF_RS01540 PF13298 DNA polymerase Ligase (LigD) DESAF_RS01545 PF02735 Ku70/Ku80 beta-barrel domain DESAF_RS01555 PF00085 Thioredoxin DESAF_RS01560 PF00258 Flavodoxin DESAF_RS01565 PF03167 Uracil DNA glycosylase superfamily DESAF_RS01570 PF13247 4Fe-4S dicluster domain DESAF_RS01600 PF13380 CoA binding domain DESAF_RS01600 PF00583 Acetyltransferase (GNAT) family DESAF_RS01600 PF13607 Succinyl-CoA ligase like flavodoxin domain DESAF_RS01605 PF16177 Acetyl-coenzyme A synthetase N-terminus DESAF_RS01605 PF00501 AMP-binding enzyme DESAF_RS01605 PF13193 AMP-binding enzyme C-terminal domain DESAF_RS01640 PF00005 ABC transporter DESAF_RS01645 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS01645 PF11862 Domain of unknown function (DUF3382) DESAF_RS01650 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS01655 PF13458 Periplasmic binding protein DESAF_RS01660 PF12399 Branched-chain amino acid ATP-binding cassette transporter DESAF_RS01660 PF00005 ABC transporter DESAF_RS01680 PF01593 Flavin containing amine oxidoreductase DESAF_RS01685 PF00890 FAD binding domain DESAF_RS01690 PF13187 4Fe-4S dicluster domain DESAF_RS01690 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit DESAF_RS01705 PF14306 PUA-like domain DESAF_RS01705 PF01747 ATP-sulfurylase DESAF_RS01720 PF00330 Aconitase family (aconitate hydratase) DESAF_RS01725 PF05698 Bacterial trigger factor protein (TF) C-terminus DESAF_RS01735 PF12850 Calcineurin-like phosphoesterase superfamily domain DESAF_RS01745 PF01960 ArgJ family DESAF_RS01765 PF00873 AcrB/AcrD/AcrF family DESAF_RS01775 PF04070 Domain of unknown function (DUF378) DESAF_RS01795 PF00994 Probable molybdopterin binding domain DESAF_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS01800 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS01800 PF00072 Response regulator receiver domain DESAF_RS01800 PF09308 LuxQ, periplasmic DESAF_RS01805 PF00072 Response regulator receiver domain DESAF_RS01805 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS01810 PF04539 Sigma-70 region 3 DESAF_RS01810 PF04542 Sigma-70 region 2 DESAF_RS01810 PF04545 Sigma-70, region 4 DESAF_RS01815 PF03600 Citrate transporter DESAF_RS01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS01820 PF00072 Response regulator receiver domain DESAF_RS01820 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS01820 PF18415 Histidine kinase receptor ArcB trans-membrane domain DESAF_RS01820 PF01627 Hpt domain DESAF_RS01820 PF00989 PAS fold DESAF_RS01845 PF13861 FlgD Tudor-like domain DESAF_RS01845 PF13860 FlgD Ig-like domain DESAF_RS01845 PF03963 Flagellar hook capping protein - N-terminal region DESAF_RS01850 PF00460 Flagella basal body rod protein DESAF_RS01850 PF07559 Flagellar basal body protein FlaE DESAF_RS01850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DESAF_RS01855 PF00460 Flagella basal body rod protein DESAF_RS01855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DESAF_RS01865 PF02465 Flagellar hook-associated protein 2 N-terminus DESAF_RS01865 PF07195 Flagellar hook-associated protein 2 C-terminus DESAF_RS01875 PF13361 UvrD-like helicase C-terminal domain DESAF_RS01875 PF00570 HRDC domain DESAF_RS01875 PF00580 UvrD/REP helicase N-terminal domain DESAF_RS01895 PF00476 DNA polymerase family A DESAF_RS01895 PF09281 Taq polymerase, exonuclease DESAF_RS01895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DESAF_RS01895 PF01367 5'-3' exonuclease, C-terminal SAM fold DESAF_RS01915 PF08808 RES domain DESAF_RS01925 PF09719 Putative redox-active protein (C_GCAxxG_C_C) DESAF_RS01930 PF00266 Aminotransferase class-V DESAF_RS01940 PF01118 Semialdehyde dehydrogenase, NAD binding domain DESAF_RS01940 PF02774 Semialdehyde dehydrogenase, dimerisation domain DESAF_RS01955 PF00005 ABC transporter DESAF_RS01960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DESAF_RS01965 PF09209 Tetracyclin repressor-like, C-terminal domain DESAF_RS01965 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS01975 PF00501 AMP-binding enzyme DESAF_RS01975 PF14535 AMP-binding enzyme C-terminal domain DESAF_RS01990 PF00011 Hsp20/alpha crystallin family DESAF_RS01995 PF09115 DNA polymerase III, delta subunit, C terminal DESAF_RS02015 PF04055 Radical SAM superfamily DESAF_RS02015 PF06463 Molybdenum Cofactor Synthesis C DESAF_RS02025 PF13847 Methyltransferase domain DESAF_RS02040 PF01799 [2Fe-2S] binding domain DESAF_RS02040 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DESAF_RS02040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DESAF_RS02040 PF00111 2Fe-2S iron-sulfur cluster binding domain DESAF_RS02055 PF02634 FdhD/NarQ family DESAF_RS02065 PF13247 4Fe-4S dicluster domain DESAF_RS02090 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DESAF_RS02095 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DESAF_RS02100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DESAF_RS02175 PF00589 Phage integrase family DESAF_RS02185 PF13460 NAD(P)H-binding DESAF_RS02185 PF11066 Protein of unknown function (DUF2867) DESAF_RS02195 PF03601 Conserved hypothetical protein 698 DESAF_RS02200 PF02954 Bacterial regulatory protein, Fis family DESAF_RS02200 PF00158 Sigma-54 interaction domain DESAF_RS02200 PF00072 Response regulator receiver domain DESAF_RS02210 PF03601 Conserved hypothetical protein 698 DESAF_RS02215 PF02954 Bacterial regulatory protein, Fis family DESAF_RS02215 PF00072 Response regulator receiver domain DESAF_RS02215 PF00158 Sigma-54 interaction domain DESAF_RS02220 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS02220 PF00989 PAS fold DESAF_RS02235 PF02085 Class III cytochrome C family DESAF_RS02240 PF02754 Cysteine-rich domain DESAF_RS02255 PF00664 ABC transporter transmembrane region DESAF_RS02255 PF00005 ABC transporter DESAF_RS02270 PF00501 AMP-binding enzyme DESAF_RS02270 PF14535 AMP-binding enzyme C-terminal domain DESAF_RS02275 PF08704 tRNA methyltransferase complex GCD14 subunit DESAF_RS02280 PF04055 Radical SAM superfamily DESAF_RS02280 PF01018 GTP1/OBG DESAF_RS02280 PF01926 50S ribosome-binding GTPase DESAF_RS02285 PF10150 Ribonuclease E/G family DESAF_RS02285 PF12111 Polyribonucleotide phosphorylase C terminal DESAF_RS02285 PF00575 S1 RNA binding domain DESAF_RS02290 PF02677 Epoxyqueuosine reductase QueH DESAF_RS02305 PF04055 Radical SAM superfamily DESAF_RS02305 PF06969 HemN C-terminal domain DESAF_RS02315 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS02315 PF00672 HAMP domain DESAF_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS02315 PF00072 Response regulator receiver domain DESAF_RS02315 PF01627 Hpt domain DESAF_RS02315 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS02320 PF12849 PBP superfamily domain DESAF_RS02330 PF03309 Type III pantothenate kinase DESAF_RS02335 PF03952 Enolase, N-terminal domain DESAF_RS02335 PF00113 Enolase, C-terminal TIM barrel domain DESAF_RS02345 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DESAF_RS02345 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DESAF_RS02350 PF01161 Phosphatidylethanolamine-binding protein DESAF_RS02360 PF03109 ABC1 family DESAF_RS02380 PF07995 Glucose / Sorbosone dehydrogenase DESAF_RS02390 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DESAF_RS02400 PF02687 FtsX-like permease family DESAF_RS02400 PF00005 ABC transporter DESAF_RS02400 PF12704 MacB-like periplasmic core domain DESAF_RS02405 PF12704 MacB-like periplasmic core domain DESAF_RS02405 PF02687 FtsX-like permease family DESAF_RS02405 PF00005 ABC transporter DESAF_RS02410 PF00581 Rhodanese-like domain DESAF_RS02420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DESAF_RS02420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DESAF_RS02420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DESAF_RS02420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DESAF_RS02425 PF12221 Bacterial membrane protein N terminal DESAF_RS02425 PF01145 SPFH domain / Band 7 family DESAF_RS02430 PF01145 SPFH domain / Band 7 family DESAF_RS02440 PF02548 Ketopantoate hydroxymethyltransferase DESAF_RS02465 PF00583 Acetyltransferase (GNAT) family DESAF_RS02470 PF03631 Virulence factor BrkB DESAF_RS02480 PF02698 DUF218 domain DESAF_RS02490 PF00155 Aminotransferase class I and II DESAF_RS02495 PF02021 Uncharacterised protein family UPF0102 DESAF_RS02500 PF01351 Ribonuclease HII DESAF_RS02505 PF01245 Ribosomal protein L19 DESAF_RS02510 PF09936 SAM-dependent RNA methyltransferase DESAF_RS02510 PF01746 tRNA (Guanine-1)-methyltransferase DESAF_RS02520 PF01782 RimM N-terminal domain DESAF_RS02530 PF00886 Ribosomal protein S16 DESAF_RS02535 PF02978 Signal peptide binding domain DESAF_RS02535 PF02881 SRP54-type protein, helical bundle domain DESAF_RS02535 PF00448 SRP54-type protein, GTPase domain DESAF_RS02550 PF00850 Histone deacetylase domain DESAF_RS02555 PF01968 Hydantoinase/oxoprolinase DESAF_RS02555 PF05378 Hydantoinase/oxoprolinase N-terminal region DESAF_RS02565 PF00581 Rhodanese-like domain DESAF_RS02580 PF02110 Hydroxyethylthiazole kinase family DESAF_RS02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS02590 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS02600 PF03631 Virulence factor BrkB DESAF_RS02605 PF00158 Sigma-54 interaction domain DESAF_RS02605 PF01590 GAF domain DESAF_RS02605 PF02954 Bacterial regulatory protein, Fis family DESAF_RS02610 PF01471 Putative peptidoglycan binding domain DESAF_RS02610 PF13401 AAA domain DESAF_RS02620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DESAF_RS02635 PF03636 Glycosyl hydrolase family 65, N-terminal domain DESAF_RS02635 PF02358 Trehalose-phosphatase DESAF_RS02635 PF03633 Glycosyl hydrolase family 65, C-terminal domain DESAF_RS02635 PF03632 Glycosyl hydrolase family 65 central catalytic domain DESAF_RS02640 PF13419 Haloacid dehalogenase-like hydrolase DESAF_RS02645 PF03459 TOBE domain DESAF_RS02660 PF01654 Cytochrome bd terminal oxidase subunit I DESAF_RS02665 PF02322 Cytochrome bd terminal oxidase subunit II DESAF_RS02680 PF13396 Phospholipase_D-nuclease N-terminal DESAF_RS02680 PF13091 PLD-like domain DESAF_RS02685 PF07690 Major Facilitator Superfamily DESAF_RS02695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DESAF_RS02695 PF17810 Arginine decarboxylase helical bundle domain DESAF_RS02695 PF17944 Arginine decarboxylase C-terminal helical extension DESAF_RS02715 PF10518 TAT (twin-arginine translocation) pathway signal sequence DESAF_RS02715 PF07731 Multicopper oxidase DESAF_RS02715 PF07732 Multicopper oxidase DESAF_RS02715 PF00394 Multicopper oxidase DESAF_RS02720 PF03435 Saccharopine dehydrogenase NADP binding domain DESAF_RS02720 PF16653 Saccharopine dehydrogenase C-terminal domain DESAF_RS02725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DESAF_RS02745 PF03129 Anticodon binding domain DESAF_RS02745 PF13393 Histidyl-tRNA synthetase DESAF_RS02750 PF00152 tRNA synthetases class II (D, K and N) DESAF_RS02750 PF01336 OB-fold nucleic acid binding domain DESAF_RS02750 PF02938 GAD domain DESAF_RS02755 PF00920 Dehydratase family DESAF_RS02785 PF00581 Rhodanese-like domain DESAF_RS02800 PF01212 Beta-eliminating lyase DESAF_RS02830 PF02463 RecF/RecN/SMC N terminal domain DESAF_RS02830 PF06470 SMC proteins Flexible Hinge Domain DESAF_RS02840 PF17827 PrmC N-terminal domain DESAF_RS02840 PF05175 Methyltransferase small domain DESAF_RS02850 PF03023 Lipid II flippase MurJ DESAF_RS02855 PF06827 Zinc finger found in FPG and IleRS DESAF_RS02855 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DESAF_RS02855 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DESAF_RS02860 PF03975 CheD chemotactic sensory transduction DESAF_RS02865 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS02865 PF00072 Response regulator receiver domain DESAF_RS02875 PF03975 CheD chemotactic sensory transduction DESAF_RS02885 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DESAF_RS02895 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DESAF_RS02900 PF00146 NADH dehydrogenase DESAF_RS02905 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DESAF_RS02905 PF00361 Proton-conducting membrane transporter DESAF_RS02905 PF13244 Domain of unknown function (DUF4040) DESAF_RS02930 PF00586 AIR synthase related protein, N-terminal domain DESAF_RS02930 PF02769 AIR synthase related protein, C-terminal domain DESAF_RS02940 PF01966 HD domain DESAF_RS02940 PF11871 Domain of unknown function (DUF3391) DESAF_RS02955 PF00056 lactate/malate dehydrogenase, NAD binding domain DESAF_RS02955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DESAF_RS02965 PF00939 Sodium:sulfate symporter transmembrane region DESAF_RS02995 PF01966 HD domain DESAF_RS02995 PF11871 Domain of unknown function (DUF3391) DESAF_RS03005 PF00474 Sodium:solute symporter family DESAF_RS03010 PF10503 Esterase PHB depolymerase DESAF_RS03025 PF00301 Rubredoxin DESAF_RS03040 PF18113 Rubredoxin binding C-terminal domain DESAF_RS03040 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS03045 PF18389 TrmO C-terminal domain DESAF_RS03045 PF01980 tRNA-methyltransferase O DESAF_RS03055 PF00465 Iron-containing alcohol dehydrogenase DESAF_RS03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS03060 PF07568 Histidine kinase DESAF_RS03060 PF12282 Signal transduction histidine kinase DESAF_RS03070 PF05362 Lon protease (S16) C-terminal proteolytic domain DESAF_RS03070 PF13654 AAA domain DESAF_RS03085 PF13580 SIS domain DESAF_RS03095 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS03105 PF00005 ABC transporter DESAF_RS03105 PF12399 Branched-chain amino acid ATP-binding cassette transporter DESAF_RS03110 PF00005 ABC transporter DESAF_RS03120 PF02277 Phosphoribosyltransferase DESAF_RS03130 PF03824 High-affinity nickel-transport protein DESAF_RS03145 PF13439 Glycosyltransferase Family 4 DESAF_RS03145 PF00534 Glycosyl transferases group 1 DESAF_RS03160 PF06965 Na+/H+ antiporter 1 DESAF_RS03160 PF13462 Thioredoxin DESAF_RS03165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DESAF_RS03165 PF03900 Porphobilinogen deaminase, C-terminal domain DESAF_RS03180 PF01202 Shikimate kinase DESAF_RS03200 PF02348 Cytidylyltransferase DESAF_RS03250 PF12911 N-terminal TM domain of oligopeptide transport permease C DESAF_RS03250 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS03255 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS03280 PF01145 SPFH domain / Band 7 family DESAF_RS03400 PF08461 Ribonuclease R winged-helix domain DESAF_RS03405 PF11985 Protein of unknown function (DUF3486) DESAF_RS03410 PF03237 Terminase-like family DESAF_RS03415 PF06074 Protein of unknown function (DUF935) DESAF_RS03435 PF10124 Mu-like prophage major head subunit gpT DESAF_RS03470 PF04984 Phage tail sheath protein subtilisin-like domain DESAF_RS03470 PF17482 Phage tail sheath C-terminal domain DESAF_RS03505 PF06890 Bacteriophage Mu Gp45 protein DESAF_RS03515 PF04865 Baseplate J-like protein DESAF_RS03555 PF08367 Peptidase M16C associated DESAF_RS03555 PF05193 Peptidase M16 inactive domain DESAF_RS03555 PF00675 Insulinase (Peptidase family M16) DESAF_RS03560 PF00034 Cytochrome c DESAF_RS03560 PF03150 Di-haem cytochrome c peroxidase DESAF_RS03575 PF01548 Transposase DESAF_RS03575 PF02371 Transposase IS116/IS110/IS902 family DESAF_RS03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS03580 PF00989 PAS fold DESAF_RS03580 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS03585 PF02954 Bacterial regulatory protein, Fis family DESAF_RS03585 PF00072 Response regulator receiver domain DESAF_RS03585 PF00158 Sigma-54 interaction domain DESAF_RS03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS03590 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS03595 PF00072 Response regulator receiver domain DESAF_RS03595 PF04397 LytTr DNA-binding domain DESAF_RS03600 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DESAF_RS03600 PF00391 PEP-utilising enzyme, mobile domain DESAF_RS03605 PF00072 Response regulator receiver domain DESAF_RS03605 PF00158 Sigma-54 interaction domain DESAF_RS03605 PF02954 Bacterial regulatory protein, Fis family DESAF_RS03635 PF02743 Cache domain DESAF_RS03635 PF00672 HAMP domain DESAF_RS03635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS03645 PF00535 Glycosyl transferase family 2 DESAF_RS03650 PF00535 Glycosyl transferase family 2 DESAF_RS03655 PF00534 Glycosyl transferases group 1 DESAF_RS03655 PF13579 Glycosyl transferase 4-like domain DESAF_RS03675 PF00535 Glycosyl transferase family 2 DESAF_RS03680 PF02397 Bacterial sugar transferase DESAF_RS03690 PF01471 Putative peptidoglycan binding domain DESAF_RS03690 PF13401 AAA domain DESAF_RS03715 PF00072 Response regulator receiver domain DESAF_RS03715 PF00158 Sigma-54 interaction domain DESAF_RS03715 PF02954 Bacterial regulatory protein, Fis family DESAF_RS03720 PF00231 ATP synthase DESAF_RS03725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DESAF_RS03725 PF02874 ATP synthase alpha/beta family, beta-barrel domain DESAF_RS03725 PF00306 ATP synthase alpha/beta chain, C terminal domain DESAF_RS03730 PF00430 ATP synthase B/B' CF(0) DESAF_RS03735 PF00137 ATP synthase subunit C DESAF_RS03740 PF00119 ATP synthase A chain DESAF_RS03760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DESAF_RS03760 PF02874 ATP synthase alpha/beta family, beta-barrel domain DESAF_RS03770 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS03770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DESAF_RS03775 PF16736 Single Cache-like DESAF_RS03775 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS03775 PF00989 PAS fold DESAF_RS03785 PF00158 Sigma-54 interaction domain DESAF_RS03785 PF00072 Response regulator receiver domain DESAF_RS03785 PF02954 Bacterial regulatory protein, Fis family DESAF_RS03790 PF00005 ABC transporter DESAF_RS03800 PF00535 Glycosyl transferase family 2 DESAF_RS03815 PF05050 Methyltransferase FkbM domain DESAF_RS03820 PF00682 HMGL-like DESAF_RS03825 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DESAF_RS03830 PF00543 Nitrogen regulatory protein P-II DESAF_RS03835 PF00543 Nitrogen regulatory protein P-II DESAF_RS03840 PF00148 Nitrogenase component 1 type Oxidoreductase DESAF_RS03845 PF00148 Nitrogenase component 1 type Oxidoreductase DESAF_RS03850 PF02579 Dinitrogenase iron-molybdenum cofactor DESAF_RS03850 PF04055 Radical SAM superfamily DESAF_RS03880 PF01261 Xylose isomerase-like TIM barrel DESAF_RS03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS03885 PF01627 Hpt domain DESAF_RS03885 PF00989 PAS fold DESAF_RS03885 PF00072 Response regulator receiver domain DESAF_RS03885 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS03885 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS03905 PF00196 Bacterial regulatory proteins, luxR family DESAF_RS03925 PF02261 Aspartate decarboxylase DESAF_RS03935 PF02142 MGS-like domain DESAF_RS03945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DESAF_RS03945 PF01627 Hpt domain DESAF_RS03945 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS03945 PF00672 HAMP domain DESAF_RS03945 PF00072 Response regulator receiver domain DESAF_RS03955 PF00563 EAL domain DESAF_RS03955 PF08448 PAS fold DESAF_RS03955 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS03955 PF08447 PAS fold DESAF_RS03960 PF02743 Cache domain DESAF_RS03960 PF00672 HAMP domain DESAF_RS03960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS03965 PF07085 DRTGG domain DESAF_RS03970 PF13607 Succinyl-CoA ligase like flavodoxin domain DESAF_RS03970 PF13380 CoA binding domain DESAF_RS03970 PF00583 Acetyltransferase (GNAT) family DESAF_RS03975 PF01979 Amidohydrolase family DESAF_RS03975 PF13382 Adenine deaminase C-terminal domain DESAF_RS04020 PF03129 Anticodon binding domain DESAF_RS04020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DESAF_RS04020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DESAF_RS04025 PF00707 Translation initiation factor IF-3, C-terminal domain DESAF_RS04025 PF05198 Translation initiation factor IF-3, N-terminal domain DESAF_RS04030 PF01632 Ribosomal protein L35 DESAF_RS04035 PF00453 Ribosomal protein L20 DESAF_RS04040 PF01409 tRNA synthetases class II core domain (F) DESAF_RS04040 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DESAF_RS04045 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DESAF_RS04045 PF01588 Putative tRNA binding domain DESAF_RS04045 PF03484 tRNA synthetase B5 domain DESAF_RS04045 PF03147 Ferredoxin-fold anticodon binding domain DESAF_RS04045 PF03483 B3/4 domain DESAF_RS04060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DESAF_RS04060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DESAF_RS04065 PF13411 MerR HTH family regulatory protein DESAF_RS04070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DESAF_RS04070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DESAF_RS04085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DESAF_RS04090 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS04095 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS04095 PF12911 N-terminal TM domain of oligopeptide transport permease C DESAF_RS04100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DESAF_RS04100 PF00005 ABC transporter DESAF_RS04105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DESAF_RS04105 PF00005 ABC transporter DESAF_RS04115 PF01738 Dienelactone hydrolase family DESAF_RS04125 PF02629 CoA binding domain DESAF_RS04125 PF06971 Putative DNA-binding protein N-terminus DESAF_RS04130 PF00137 ATP synthase subunit C DESAF_RS04135 PF00119 ATP synthase A chain DESAF_RS04150 PF13654 AAA domain DESAF_RS04150 PF05362 Lon protease (S16) C-terminal proteolytic domain DESAF_RS04155 PF05977 Transmembrane secretion effector DESAF_RS04170 PF00682 HMGL-like DESAF_RS04175 PF05036 Sporulation related domain DESAF_RS04175 PF03330 Lytic transglycolase DESAF_RS04180 PF08448 PAS fold DESAF_RS04180 PF01339 CheB methylesterase DESAF_RS04180 PF01739 CheR methyltransferase, SAM binding domain DESAF_RS04180 PF03705 CheR methyltransferase, all-alpha domain DESAF_RS04185 PF00072 Response regulator receiver domain DESAF_RS04185 PF12833 Helix-turn-helix domain DESAF_RS04190 PF00072 Response regulator receiver domain DESAF_RS04190 PF12833 Helix-turn-helix domain DESAF_RS04195 PF06071 Protein of unknown function (DUF933) DESAF_RS04195 PF01926 50S ribosome-binding GTPase DESAF_RS04225 PF00216 Bacterial DNA-binding protein DESAF_RS04230 PF01230 HIT domain DESAF_RS04240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DESAF_RS04240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DESAF_RS04245 PF01979 Amidohydrolase family DESAF_RS04255 PF00365 Phosphofructokinase DESAF_RS04260 PF00011 Hsp20/alpha crystallin family DESAF_RS04265 PF01435 Peptidase family M48 DESAF_RS04270 PF13180 PDZ domain DESAF_RS04285 PF01741 Large-conductance mechanosensitive channel, MscL DESAF_RS04295 PF01370 NAD dependent epimerase/dehydratase family DESAF_RS04300 PF16363 GDP-mannose 4,6 dehydratase DESAF_RS04305 PF09335 SNARE associated Golgi protein DESAF_RS04310 PF02463 RecF/RecN/SMC N terminal domain DESAF_RS04315 PF00072 Response regulator receiver domain DESAF_RS04315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS04315 PF00672 HAMP domain DESAF_RS04315 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS04315 PF01627 Hpt domain DESAF_RS04315 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS04330 PF01022 Bacterial regulatory protein, arsR family DESAF_RS04340 PF00072 Response regulator receiver domain DESAF_RS04340 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS04340 PF01627 Hpt domain DESAF_RS04340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS04340 PF00989 PAS fold DESAF_RS04340 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS04360 PF01475 Ferric uptake regulator family DESAF_RS04365 PF00072 Response regulator receiver domain DESAF_RS04365 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS04370 PF16736 Single Cache-like DESAF_RS04370 PF00989 PAS fold DESAF_RS04370 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS04375 PF00005 ABC transporter DESAF_RS04380 PF01895 PhoU domain DESAF_RS04390 PF02743 Cache domain DESAF_RS04390 PF00672 HAMP domain DESAF_RS04390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS04410 PF00893 Small Multidrug Resistance protein DESAF_RS04415 PF02540 NAD synthase DESAF_RS04420 PF00583 Acetyltransferase (GNAT) family DESAF_RS04425 PF00437 Type II/IV secretion system protein DESAF_RS04450 PF07963 Prokaryotic N-terminal methylation motif DESAF_RS04455 PF00482 Type II secretion system (T2SS), protein F DESAF_RS04460 PF00437 Type II/IV secretion system protein DESAF_RS04465 PF13401 AAA domain DESAF_RS04465 PF01471 Putative peptidoglycan binding domain DESAF_RS04470 PF11741 AMIN domain DESAF_RS04470 PF00263 Bacterial type II and III secretion system protein DESAF_RS04470 PF03958 Bacterial type II/III secretion system short domain DESAF_RS04470 PF07660 Secretin and TonB N terminus short domain DESAF_RS04490 PF01261 Xylose isomerase-like TIM barrel DESAF_RS04495 PF02675 S-adenosylmethionine decarboxylase DESAF_RS04510 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS04520 PF01609 Transposase DDE domain DESAF_RS04525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DESAF_RS04525 PF01568 Molydopterin dinucleotide binding domain DESAF_RS04525 PF00384 Molybdopterin oxidoreductase DESAF_RS04530 PF00148 Nitrogenase component 1 type Oxidoreductase DESAF_RS04535 PF00148 Nitrogenase component 1 type Oxidoreductase DESAF_RS04540 PF04055 Radical SAM superfamily DESAF_RS04540 PF02579 Dinitrogenase iron-molybdenum cofactor DESAF_RS04560 PF01494 FAD binding domain DESAF_RS04575 PF02371 Transposase IS116/IS110/IS902 family DESAF_RS04575 PF01548 Transposase DESAF_RS04585 PF00106 short chain dehydrogenase DESAF_RS04590 PF13180 PDZ domain DESAF_RS04595 PF00005 ABC transporter DESAF_RS04595 PF00664 ABC transporter transmembrane region DESAF_RS04600 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS04600 PF09308 LuxQ, periplasmic DESAF_RS04600 PF00072 Response regulator receiver domain DESAF_RS04610 PF03061 Thioesterase superfamily DESAF_RS04630 PF02446 4-alpha-glucanotransferase DESAF_RS04635 PF05239 PRC-barrel domain DESAF_RS04635 PF09557 Domain of unknown function (DUF2382) DESAF_RS04645 PF00202 Aminotransferase class-III DESAF_RS04650 PF00183 Hsp90 protein DESAF_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DESAF_RS04665 PF03466 LysR substrate binding domain DESAF_RS04690 PF03641 Possible lysine decarboxylase DESAF_RS04700 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS04705 PF12704 MacB-like periplasmic core domain DESAF_RS04705 PF00005 ABC transporter DESAF_RS04705 PF02687 FtsX-like permease family DESAF_RS04740 PF02308 MgtC family DESAF_RS04745 PF00578 AhpC/TSA family DESAF_RS04745 PF10417 C-terminal domain of 1-Cys peroxiredoxin DESAF_RS04750 PF01810 LysE type translocator DESAF_RS04765 PF04023 FeoA domain DESAF_RS04765 PF07670 Nucleoside recognition DESAF_RS04765 PF02421 Ferrous iron transport protein B DESAF_RS04765 PF17910 FeoB cytosolic helical domain DESAF_RS04765 PF07664 Ferrous iron transport protein B C terminus DESAF_RS04790 PF12282 Signal transduction histidine kinase DESAF_RS04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS04790 PF07568 Histidine kinase DESAF_RS04795 PF13335 Magnesium chelatase, subunit ChlI C-terminal DESAF_RS04795 PF01078 Magnesium chelatase, subunit ChlI DESAF_RS04800 PF00939 Sodium:sulfate symporter transmembrane region DESAF_RS04805 PF02954 Bacterial regulatory protein, Fis family DESAF_RS04805 PF00072 Response regulator receiver domain DESAF_RS04805 PF00158 Sigma-54 interaction domain DESAF_RS04810 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS04810 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS04815 PF13335 Magnesium chelatase, subunit ChlI C-terminal DESAF_RS04815 PF01078 Magnesium chelatase, subunit ChlI DESAF_RS04820 PF01966 HD domain DESAF_RS04820 PF00072 Response regulator receiver domain DESAF_RS04825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DESAF_RS04825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DESAF_RS04830 PF12792 CSS motif domain associated with EAL DESAF_RS04830 PF00563 EAL domain DESAF_RS04835 PF02562 PhoH-like protein DESAF_RS04835 PF13638 PIN domain DESAF_RS04840 PF01209 ubiE/COQ5 methyltransferase family DESAF_RS04845 PF00072 Response regulator receiver domain DESAF_RS04845 PF00158 Sigma-54 interaction domain DESAF_RS04845 PF02954 Bacterial regulatory protein, Fis family DESAF_RS04850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS04850 PF00989 PAS fold DESAF_RS04850 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS04855 PF00155 Aminotransferase class I and II DESAF_RS04870 PF00924 Mechanosensitive ion channel DESAF_RS04880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS04880 PF00672 HAMP domain DESAF_RS04880 PF02743 Cache domain DESAF_RS04890 PF00890 FAD binding domain DESAF_RS04895 PF04324 BFD-like [2Fe-2S] binding domain DESAF_RS04895 PF01266 FAD dependent oxidoreductase DESAF_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS04925 PF13416 Bacterial extracellular solute-binding protein DESAF_RS04930 PF17912 MalK OB fold domain DESAF_RS04930 PF00005 ABC transporter DESAF_RS04940 PF00455 DeoR C terminal sensor domain DESAF_RS04940 PF08220 DeoR-like helix-turn-helix domain DESAF_RS04945 PF00155 Aminotransferase class I and II DESAF_RS04950 PF08241 Methyltransferase domain DESAF_RS04950 PF12697 Alpha/beta hydrolase family DESAF_RS04955 PF13847 Methyltransferase domain DESAF_RS04960 PF02581 Thiamine monophosphate synthase DESAF_RS04975 PF00501 AMP-binding enzyme DESAF_RS04975 PF13193 AMP-binding enzyme C-terminal domain DESAF_RS05005 PF03063 Prismane/CO dehydrogenase family DESAF_RS05010 PF03063 Prismane/CO dehydrogenase family DESAF_RS05015 PF03453 MoeA N-terminal region (domain I and II) DESAF_RS05015 PF03454 MoeA C-terminal region (domain IV) DESAF_RS05015 PF00994 Probable molybdopterin binding domain DESAF_RS05020 PF12464 Maltose acetyltransferase DESAF_RS05020 PF14602 Hexapeptide repeat of succinyl-transferase DESAF_RS05025 PF10672 S-adenosylmethionine-dependent methyltransferase DESAF_RS05025 PF17785 PUA-like domain DESAF_RS05030 PF00588 SpoU rRNA Methylase family DESAF_RS05040 PF01871 AMMECR1 DESAF_RS05045 PF00551 Formyl transferase DESAF_RS05050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DESAF_RS05050 PF02602 Uroporphyrinogen-III synthase HemD DESAF_RS05060 PF01370 NAD dependent epimerase/dehydratase family DESAF_RS05065 PF16363 GDP-mannose 4,6 dehydratase DESAF_RS05070 PF00483 Nucleotidyl transferase DESAF_RS05075 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DESAF_RS05080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DESAF_RS05085 PF00583 Acetyltransferase (GNAT) family DESAF_RS05105 PF00005 ABC transporter DESAF_RS05105 PF00664 ABC transporter transmembrane region DESAF_RS05120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DESAF_RS05120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DESAF_RS05120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DESAF_RS05130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DESAF_RS05130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DESAF_RS05130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DESAF_RS05135 PF00005 ABC transporter DESAF_RS05140 PF03649 Uncharacterised protein family (UPF0014) DESAF_RS05180 PF13439 Glycosyltransferase Family 4 DESAF_RS05180 PF00534 Glycosyl transferases group 1 DESAF_RS05190 PF10502 Signal peptidase, peptidase S26 DESAF_RS05195 PF06421 GTP-binding protein LepA C-terminus DESAF_RS05195 PF03144 Elongation factor Tu domain 2 DESAF_RS05195 PF00009 Elongation factor Tu GTP binding domain DESAF_RS05195 PF00679 Elongation factor G C-terminus DESAF_RS05205 PF01627 Hpt domain DESAF_RS05205 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS05205 PF00072 Response regulator receiver domain DESAF_RS05205 PF00672 HAMP domain DESAF_RS05205 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS05215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DESAF_RS05215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DESAF_RS05220 PF00245 Alkaline phosphatase DESAF_RS05235 PF05139 Erythromycin esterase DESAF_RS05235 PF00156 Phosphoribosyl transferase domain DESAF_RS05240 PF02335 Cytochrome c552 DESAF_RS05245 PF03264 NapC/NirT cytochrome c family, N-terminal region DESAF_RS05280 PF01384 Phosphate transporter family DESAF_RS05305 PF02603 HPr Serine kinase N terminus DESAF_RS05305 PF07475 HPr Serine kinase C-terminal domain DESAF_RS05315 PF00005 ABC transporter DESAF_RS05320 PF00950 ABC 3 transport family DESAF_RS05335 PF02654 Cobalamin-5-phosphate synthase DESAF_RS05350 PF01416 tRNA pseudouridine synthase DESAF_RS05355 PF02569 Pantoate-beta-alanine ligase DESAF_RS05360 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DESAF_RS05365 PF09350 Domain of unknown function (DUF1992) DESAF_RS05370 PF00294 pfkB family carbohydrate kinase DESAF_RS05370 PF01467 Cytidylyltransferase-like DESAF_RS05375 PF02195 ParB-like nuclease domain DESAF_RS05375 PF17762 HTH domain found in ParB protein DESAF_RS05385 PF13614 AAA domain DESAF_RS05395 PF16200 C-terminal region of band_7 DESAF_RS05395 PF01145 SPFH domain / Band 7 family DESAF_RS05410 PF02441 Flavoprotein DESAF_RS05410 PF04127 DNA / pantothenate metabolism flavoprotein DESAF_RS05420 PF02547 Queuosine biosynthesis protein DESAF_RS05430 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DESAF_RS05430 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DESAF_RS05430 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DESAF_RS05450 PF03477 ATP cone domain DESAF_RS05450 PF00317 Ribonucleotide reductase, all-alpha domain DESAF_RS05450 PF02867 Ribonucleotide reductase, barrel domain DESAF_RS05470 PF01264 Chorismate synthase DESAF_RS05485 PF01435 Peptidase family M48 DESAF_RS05500 PF00300 Histidine phosphatase superfamily (branch 1) DESAF_RS05510 PF00563 EAL domain DESAF_RS05510 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS05510 PF00072 Response regulator receiver domain DESAF_RS05515 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS05515 PF00563 EAL domain DESAF_RS05515 PF00072 Response regulator receiver domain DESAF_RS05520 PF00005 ABC transporter DESAF_RS05520 PF12704 MacB-like periplasmic core domain DESAF_RS05520 PF02687 FtsX-like permease family DESAF_RS05535 PF05443 ROS/MUCR transcriptional regulator protein DESAF_RS05550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS05550 PF13426 PAS domain DESAF_RS05550 PF00672 HAMP domain DESAF_RS05555 PF00072 Response regulator receiver domain DESAF_RS05555 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS05555 PF00989 PAS fold DESAF_RS05555 PF01627 Hpt domain DESAF_RS05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS05555 PF18415 Histidine kinase receptor ArcB trans-membrane domain DESAF_RS05560 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DESAF_RS05575 PF12544 Lysine-2,3-aminomutase DESAF_RS05575 PF04055 Radical SAM superfamily DESAF_RS05580 PF00005 ABC transporter DESAF_RS05585 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS05590 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS05595 PF00342 Phosphoglucose isomerase DESAF_RS05640 PF00350 Dynamin family DESAF_RS05650 PF04715 Anthranilate synthase component I, N terminal region DESAF_RS05650 PF00425 chorismate binding enzyme DESAF_RS05650 PF00117 Glutamine amidotransferase class-I DESAF_RS05655 PF00117 Glutamine amidotransferase class-I DESAF_RS05665 PF00989 PAS fold DESAF_RS05665 PF13188 PAS domain DESAF_RS05665 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS05665 PF13426 PAS domain DESAF_RS05665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS05670 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS05675 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS05675 PF00072 Response regulator receiver domain DESAF_RS05685 PF03793 PASTA domain DESAF_RS05685 PF00069 Protein kinase domain DESAF_RS05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS05690 PF09456 RcsC Alpha-Beta-Loop (ABL) DESAF_RS05690 PF00072 Response regulator receiver domain DESAF_RS05690 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS05700 PF08240 Alcohol dehydrogenase GroES-like domain DESAF_RS05700 PF13823 Alcohol dehydrogenase GroES-associated DESAF_RS05700 PF00107 Zinc-binding dehydrogenase DESAF_RS05705 PF02772 S-adenosylmethionine synthetase, central domain DESAF_RS05705 PF02773 S-adenosylmethionine synthetase, C-terminal domain DESAF_RS05705 PF00438 S-adenosylmethionine synthetase, N-terminal domain DESAF_RS05710 PF02397 Bacterial sugar transferase DESAF_RS05725 PF16363 GDP-mannose 4,6 dehydratase DESAF_RS05745 PF00535 Glycosyl transferase family 2 DESAF_RS05775 PF01634 ATP phosphoribosyltransferase DESAF_RS05775 PF08029 HisG, C-terminal domain DESAF_RS05780 PF01502 Phosphoribosyl-AMP cyclohydrolase DESAF_RS05795 PF00365 Phosphofructokinase DESAF_RS05800 PF00989 PAS fold DESAF_RS05800 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS05805 PF00107 Zinc-binding dehydrogenase DESAF_RS05805 PF08240 Alcohol dehydrogenase GroES-like domain DESAF_RS05820 PF07556 Protein of unknown function (DUF1538) DESAF_RS05825 PF07556 Protein of unknown function (DUF1538) DESAF_RS05830 PF00999 Sodium/hydrogen exchanger family DESAF_RS05830 PF02254 TrkA-N domain DESAF_RS05845 PF08501 Shikimate dehydrogenase substrate binding domain DESAF_RS05845 PF01488 Shikimate / quinate 5-dehydrogenase DESAF_RS05845 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DESAF_RS05850 PF01476 LysM domain DESAF_RS05850 PF01464 Transglycosylase SLT domain DESAF_RS05855 PF08032 RNA 2'-O ribose methyltransferase substrate binding DESAF_RS05855 PF00588 SpoU rRNA Methylase family DESAF_RS05860 PF01313 Bacterial export proteins, family 3 DESAF_RS05865 PF00813 FliP family DESAF_RS05875 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DESAF_RS05880 PF02154 Flagellar motor switch protein FliM DESAF_RS05880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DESAF_RS05890 PF13677 Membrane MotB of proton-channel complex MotA/MotB DESAF_RS05890 PF00691 OmpA family DESAF_RS05895 PF13677 Membrane MotB of proton-channel complex MotA/MotB DESAF_RS05895 PF00691 OmpA family DESAF_RS05900 PF01618 MotA/TolQ/ExbB proton channel family DESAF_RS05905 PF01168 Alanine racemase, N-terminal domain DESAF_RS05910 PF07650 KH domain DESAF_RS05910 PF01926 50S ribosome-binding GTPase DESAF_RS05915 PF00484 Carbonic anhydrase DESAF_RS05920 PF00072 Response regulator receiver domain DESAF_RS05920 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS05925 PF08447 PAS fold DESAF_RS05925 PF08448 PAS fold DESAF_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS05930 PF00158 Sigma-54 interaction domain DESAF_RS05930 PF00072 Response regulator receiver domain DESAF_RS05930 PF02954 Bacterial regulatory protein, Fis family DESAF_RS05935 PF04055 Radical SAM superfamily DESAF_RS05950 PF00308 Bacterial dnaA protein DESAF_RS05950 PF08299 Bacterial dnaA protein helix-turn-helix DESAF_RS05950 PF11638 DnaA N-terminal domain DESAF_RS05960 PF01751 Toprim domain DESAF_RS05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS05960 PF00204 DNA gyrase B DESAF_RS05960 PF00986 DNA gyrase B subunit, carboxyl terminus DESAF_RS05965 PF00521 DNA gyrase/topoisomerase IV, subunit A DESAF_RS05965 PF03989 DNA gyrase C-terminal domain, beta-propeller DESAF_RS05985 PF13458 Periplasmic binding protein DESAF_RS05990 PF01479 S4 domain DESAF_RS05990 PF00849 RNA pseudouridylate synthase DESAF_RS06000 PF00005 ABC transporter DESAF_RS06005 PF02687 FtsX-like permease family DESAF_RS06005 PF18075 FtsX extracellular domain DESAF_RS06010 PF07690 Major Facilitator Superfamily DESAF_RS06015 PF01678 Diaminopimelate epimerase DESAF_RS06020 PF00749 tRNA synthetases class I (E and Q), catalytic domain DESAF_RS06025 PF13435 Cytochrome c554 and c-prime DESAF_RS06030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS06030 PF00672 HAMP domain DESAF_RS06030 PF13426 PAS domain DESAF_RS06040 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DESAF_RS06050 PF01548 Transposase DESAF_RS06050 PF02371 Transposase IS116/IS110/IS902 family DESAF_RS06055 PF00873 AcrB/AcrD/AcrF family DESAF_RS06060 PF00529 HlyD membrane-fusion protein of T1SS DESAF_RS06060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DESAF_RS06070 PF01869 BadF/BadG/BcrA/BcrD ATPase family DESAF_RS06075 PF03313 Serine dehydratase alpha chain DESAF_RS06085 PF00578 AhpC/TSA family DESAF_RS06110 PF00072 Response regulator receiver domain DESAF_RS06115 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS06115 PF13426 PAS domain DESAF_RS06115 PF13188 PAS domain DESAF_RS06115 PF00989 PAS fold DESAF_RS06145 PF03958 Bacterial type II/III secretion system short domain DESAF_RS06145 PF00263 Bacterial type II and III secretion system protein DESAF_RS06150 PF00437 Type II/IV secretion system protein DESAF_RS06155 PF00482 Type II secretion system (T2SS), protein F DESAF_RS06170 PF08334 Type II secretion system (T2SS), protein G DESAF_RS06170 PF07963 Prokaryotic N-terminal methylation motif DESAF_RS06175 PF07963 Prokaryotic N-terminal methylation motif DESAF_RS06175 PF12019 Type II transport protein GspH DESAF_RS06180 PF02501 Type II secretion system (T2SS), protein I DESAF_RS06180 PF07963 Prokaryotic N-terminal methylation motif DESAF_RS06190 PF03934 Type II secretion system (T2SS), protein K DESAF_RS06215 PF16925 Tetracyclin repressor-like, C-terminal domain DESAF_RS06215 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS06225 PF01751 Toprim domain DESAF_RS06225 PF01131 DNA topoisomerase DESAF_RS06225 PF01396 Topoisomerase DNA binding C4 zinc finger DESAF_RS06230 PF07883 Cupin domain DESAF_RS06235 PF00501 AMP-binding enzyme DESAF_RS06235 PF13193 AMP-binding enzyme C-terminal domain DESAF_RS06240 PF08031 Berberine and berberine like DESAF_RS06240 PF01565 FAD binding domain DESAF_RS06260 PF00005 ABC transporter DESAF_RS06270 PF00550 Phosphopantetheine attachment site DESAF_RS06275 PF00005 ABC transporter DESAF_RS06280 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS06285 PF00557 Metallopeptidase family M24 DESAF_RS06290 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS06295 PF02608 ABC transporter substrate-binding protein PnrA-like DESAF_RS06300 PF00156 Phosphoribosyl transferase domain DESAF_RS06305 PF00171 Aldehyde dehydrogenase family DESAF_RS06310 PF00037 4Fe-4S binding domain DESAF_RS06310 PF04060 Putative Fe-S cluster DESAF_RS06310 PF13187 4Fe-4S dicluster domain DESAF_RS06315 PF00005 ABC transporter DESAF_RS06320 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS06330 PF04055 Radical SAM superfamily DESAF_RS06335 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DESAF_RS06335 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DESAF_RS06340 PF01728 FtsJ-like methyltransferase DESAF_RS06340 PF18125 RlmM ferredoxin-like domain DESAF_RS06345 PF00132 Bacterial transferase hexapeptide (six repeats) DESAF_RS06350 PF00291 Pyridoxal-phosphate dependent enzyme DESAF_RS06355 PF00266 Aminotransferase class-V DESAF_RS06360 PF01592 NifU-like N terminal domain DESAF_RS06360 PF01106 NifU-like domain DESAF_RS06360 PF04324 BFD-like [2Fe-2S] binding domain DESAF_RS06375 PF00072 Response regulator receiver domain DESAF_RS06375 PF00672 HAMP domain DESAF_RS06375 PF01627 Hpt domain DESAF_RS06375 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS06375 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS06380 PF00483 Nucleotidyl transferase DESAF_RS06390 PF01169 Uncharacterized protein family UPF0016 DESAF_RS06395 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DESAF_RS06420 PF02595 Glycerate kinase family DESAF_RS06440 PF00570 HRDC domain DESAF_RS06440 PF01612 3'-5' exonuclease DESAF_RS06450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS06455 PF00672 HAMP domain DESAF_RS06455 PF00909 Ammonium Transporter Family DESAF_RS06460 PF07722 Peptidase C26 DESAF_RS06475 PF00271 Helicase conserved C-terminal domain DESAF_RS06475 PF00270 DEAD/DEAH box helicase DESAF_RS06475 PF09369 Domain of unknown function (DUF1998) DESAF_RS06500 PF01022 Bacterial regulatory protein, arsR family DESAF_RS06505 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DESAF_RS06505 PF05221 S-adenosyl-L-homocysteine hydrolase DESAF_RS06525 PF01687 Riboflavin kinase DESAF_RS06525 PF06574 FAD synthetase DESAF_RS06535 PF01627 Hpt domain DESAF_RS06535 PF00072 Response regulator receiver domain DESAF_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS06535 PF00672 HAMP domain DESAF_RS06535 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS06535 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS06565 PF00535 Glycosyl transferase family 2 DESAF_RS06580 PF08323 Starch synthase catalytic domain DESAF_RS06580 PF00534 Glycosyl transferases group 1 DESAF_RS06585 PF13478 XdhC Rossmann domain DESAF_RS06585 PF02625 XdhC and CoxI family DESAF_RS06595 PF00158 Sigma-54 interaction domain DESAF_RS06595 PF02954 Bacterial regulatory protein, Fis family DESAF_RS06600 PF04012 PspA/IM30 family DESAF_RS06625 PF00691 OmpA family DESAF_RS06625 PF13677 Membrane MotB of proton-channel complex MotA/MotB DESAF_RS06630 PF01618 MotA/TolQ/ExbB proton channel family DESAF_RS06640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DESAF_RS06640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DESAF_RS06650 PF01202 Shikimate kinase DESAF_RS06660 PF00501 AMP-binding enzyme DESAF_RS06680 PF00067 Cytochrome P450 DESAF_RS06690 PF00005 ABC transporter DESAF_RS06700 PF00873 AcrB/AcrD/AcrF family DESAF_RS06715 PF04454 Encapsulating protein for peroxidase DESAF_RS06720 PF00672 HAMP domain DESAF_RS06720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS06720 PF13426 PAS domain DESAF_RS06745 PF01266 FAD dependent oxidoreductase DESAF_RS06745 PF00355 Rieske [2Fe-2S] domain DESAF_RS06750 PF16363 GDP-mannose 4,6 dehydratase DESAF_RS06755 PF16363 GDP-mannose 4,6 dehydratase DESAF_RS06765 PF13439 Glycosyltransferase Family 4 DESAF_RS06765 PF00534 Glycosyl transferases group 1 DESAF_RS06790 PF00300 Histidine phosphatase superfamily (branch 1) DESAF_RS06795 PF08003 Protein of unknown function (DUF1698) DESAF_RS06800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DESAF_RS06810 PF01066 CDP-alcohol phosphatidyltransferase DESAF_RS06815 PF01658 Myo-inositol-1-phosphate synthase DESAF_RS06820 PF00989 PAS fold DESAF_RS06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS06820 PF00672 HAMP domain DESAF_RS06820 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS06825 PF13237 4Fe-4S dicluster domain DESAF_RS06850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DESAF_RS06850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DESAF_RS06855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DESAF_RS06855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DESAF_RS06860 PF08679 Dissimilatory sulfite reductase D (DsrD) DESAF_RS06865 PF07685 CobB/CobQ-like glutamine amidotransferase domain DESAF_RS06865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DESAF_RS06885 PF00561 alpha/beta hydrolase fold DESAF_RS06890 PF16916 Dimerisation domain of Zinc Transporter DESAF_RS06890 PF01545 Cation efflux family DESAF_RS06895 PF00881 Nitroreductase family DESAF_RS06900 PF11842 Domain of unknown function (DUF3362) DESAF_RS06900 PF04055 Radical SAM superfamily DESAF_RS06900 PF08497 Radical SAM N-terminal DESAF_RS06905 PF01050 Mannose-6-phosphate isomerase DESAF_RS06905 PF00483 Nucleotidyl transferase DESAF_RS06920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DESAF_RS06920 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DESAF_RS06935 PF01593 Flavin containing amine oxidoreductase DESAF_RS06945 PF00072 Response regulator receiver domain DESAF_RS06945 PF04397 LytTr DNA-binding domain DESAF_RS06950 PF00501 AMP-binding enzyme DESAF_RS06950 PF13193 AMP-binding enzyme C-terminal domain DESAF_RS06950 PF16177 Acetyl-coenzyme A synthetase N-terminus DESAF_RS06955 PF13537 Glutamine amidotransferase domain DESAF_RS06955 PF00733 Asparagine synthase DESAF_RS06975 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DESAF_RS06975 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DESAF_RS06975 PF01189 16S rRNA methyltransferase RsmB/F DESAF_RS06980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DESAF_RS06980 PF02805 Metal binding domain of Ada DESAF_RS06980 PF12833 Helix-turn-helix domain DESAF_RS06980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DESAF_RS07000 PF02567 Phenazine biosynthesis-like protein DESAF_RS07030 PF00082 Subtilase family DESAF_RS07035 PF01569 PAP2 superfamily DESAF_RS07045 PF00468 Ribosomal protein L34 DESAF_RS07055 PF01809 Putative membrane protein insertion efficiency factor DESAF_RS07060 PF14849 YidC periplasmic domain DESAF_RS07060 PF02096 60Kd inner membrane protein DESAF_RS07065 PF01424 R3H domain DESAF_RS07065 PF14804 Jag N-terminus DESAF_RS07080 PF12631 MnmE helical domain DESAF_RS07080 PF10396 GTP-binding protein TrmE N-terminus DESAF_RS07080 PF01926 50S ribosome-binding GTPase DESAF_RS07085 PF00580 UvrD/REP helicase N-terminal domain DESAF_RS07085 PF13361 UvrD-like helicase C-terminal domain DESAF_RS07090 PF00072 Response regulator receiver domain DESAF_RS07090 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS07100 PF01544 CorA-like Mg2+ transporter protein DESAF_RS07110 PF00563 EAL domain DESAF_RS07110 PF03707 Bacterial signalling protein N terminal repeat DESAF_RS07110 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS07120 PF02915 Rubrerythrin DESAF_RS07125 PF01475 Ferric uptake regulator family DESAF_RS07130 PF13597 Anaerobic ribonucleoside-triphosphate reductase DESAF_RS07130 PF03477 ATP cone domain DESAF_RS07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS07165 PF00072 Response regulator receiver domain DESAF_RS07165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DESAF_RS07165 PF01627 Hpt domain DESAF_RS07165 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS07165 PF00672 HAMP domain DESAF_RS07170 PF02540 NAD synthase DESAF_RS07170 PF00795 Carbon-nitrogen hydrolase DESAF_RS07180 PF01739 CheR methyltransferase, SAM binding domain DESAF_RS07190 PF02743 Cache domain DESAF_RS07190 PF00672 HAMP domain DESAF_RS07190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS07195 PF01627 Hpt domain DESAF_RS07195 PF00072 Response regulator receiver domain DESAF_RS07195 PF01584 CheW-like domain DESAF_RS07200 PF01339 CheB methylesterase DESAF_RS07200 PF00072 Response regulator receiver domain DESAF_RS07205 PF01627 Hpt domain DESAF_RS07205 PF00672 HAMP domain DESAF_RS07205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DESAF_RS07205 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS07205 PF00072 Response regulator receiver domain DESAF_RS07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS07215 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS07215 PF00072 Response regulator receiver domain DESAF_RS07225 PF00977 Histidine biosynthesis protein DESAF_RS07230 PF00117 Glutamine amidotransferase class-I DESAF_RS07235 PF01370 NAD dependent epimerase/dehydratase family DESAF_RS07250 PF01070 FMN-dependent dehydrogenase DESAF_RS07265 PF10458 Valyl tRNA synthetase tRNA binding arm DESAF_RS07265 PF00133 tRNA synthetases class I (I, L, M and V) DESAF_RS07265 PF08264 Anticodon-binding domain of tRNA DESAF_RS07280 PF03783 Curli production assembly/transport component CsgG DESAF_RS07290 PF17746 SfsA N-terminal OB domain DESAF_RS07290 PF03749 Sugar fermentation stimulation protein RE domain DESAF_RS07295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DESAF_RS07320 PF13247 4Fe-4S dicluster domain DESAF_RS07340 PF00158 Sigma-54 interaction domain DESAF_RS07340 PF00072 Response regulator receiver domain DESAF_RS07340 PF02954 Bacterial regulatory protein, Fis family DESAF_RS07345 PF00158 Sigma-54 interaction domain DESAF_RS07345 PF00072 Response regulator receiver domain DESAF_RS07360 PF01609 Transposase DDE domain DESAF_RS07380 PF01609 Transposase DDE domain DESAF_RS07395 PF09163 Formate dehydrogenase N, transmembrane DESAF_RS07395 PF13247 4Fe-4S dicluster domain DESAF_RS07395 PF12800 4Fe-4S binding domain DESAF_RS07400 PF02583 Metal-sensitive transcriptional repressor DESAF_RS07420 PF00581 Rhodanese-like domain DESAF_RS07430 PF13247 4Fe-4S dicluster domain DESAF_RS07435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DESAF_RS07435 PF00384 Molybdopterin oxidoreductase DESAF_RS07435 PF01568 Molydopterin dinucleotide binding domain DESAF_RS07435 PF10518 TAT (twin-arginine translocation) pathway signal sequence DESAF_RS07445 PF02954 Bacterial regulatory protein, Fis family DESAF_RS07445 PF00158 Sigma-54 interaction domain DESAF_RS07445 PF00072 Response regulator receiver domain DESAF_RS07450 PF00158 Sigma-54 interaction domain DESAF_RS07450 PF02954 Bacterial regulatory protein, Fis family DESAF_RS07450 PF00072 Response regulator receiver domain DESAF_RS07455 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS07460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DESAF_RS07480 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DESAF_RS07490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DESAF_RS07490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DESAF_RS07495 PF02684 Lipid-A-disaccharide synthetase DESAF_RS07515 PF04371 Porphyromonas-type peptidyl-arginine deiminase DESAF_RS07520 PF02540 NAD synthase DESAF_RS07520 PF00795 Carbon-nitrogen hydrolase DESAF_RS07525 PF03454 MoeA C-terminal region (domain IV) DESAF_RS07525 PF03453 MoeA N-terminal region (domain I and II) DESAF_RS07525 PF00994 Probable molybdopterin binding domain DESAF_RS07530 PF01418 Helix-turn-helix domain, rpiR family DESAF_RS07530 PF02685 Glucokinase DESAF_RS07530 PF01380 SIS domain DESAF_RS07545 PF01361 Tautomerase enzyme DESAF_RS07555 PF01569 PAP2 superfamily DESAF_RS07560 PF00107 Zinc-binding dehydrogenase DESAF_RS07560 PF13823 Alcohol dehydrogenase GroES-associated DESAF_RS07560 PF08240 Alcohol dehydrogenase GroES-like domain DESAF_RS07575 PF01189 16S rRNA methyltransferase RsmB/F DESAF_RS07575 PF01029 NusB family DESAF_RS07585 PF00551 Formyl transferase DESAF_RS07585 PF02911 Formyl transferase, C-terminal domain DESAF_RS07590 PF01327 Polypeptide deformylase DESAF_RS07595 PF01925 Sulfite exporter TauE/SafE DESAF_RS07605 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DESAF_RS07610 PF00171 Aldehyde dehydrogenase family DESAF_RS07615 PF01037 Lrp/AsnC ligand binding domain DESAF_RS07620 PF00529 HlyD membrane-fusion protein of T1SS DESAF_RS07620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DESAF_RS07625 PF07690 Major Facilitator Superfamily DESAF_RS07650 PF01594 AI-2E family transporter DESAF_RS07695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DESAF_RS07705 PF00578 AhpC/TSA family DESAF_RS07715 PF01554 MatE DESAF_RS07725 PF01894 Uncharacterised protein family UPF0047 DESAF_RS07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS07740 PF07568 Histidine kinase DESAF_RS07740 PF12282 Signal transduction histidine kinase DESAF_RS07750 PF02082 Transcriptional regulator DESAF_RS07755 PF00294 pfkB family carbohydrate kinase DESAF_RS07755 PF01467 Cytidylyltransferase-like DESAF_RS07765 PF00909 Ammonium Transporter Family DESAF_RS07770 PF00543 Nitrogen regulatory protein P-II DESAF_RS07780 PF08335 GlnD PII-uridylyltransferase DESAF_RS07780 PF01842 ACT domain DESAF_RS07780 PF01909 Nucleotidyltransferase domain DESAF_RS07780 PF01966 HD domain DESAF_RS07790 PF00005 ABC transporter DESAF_RS07800 PF04122 Putative cell wall binding repeat 2 DESAF_RS07800 PF01520 N-acetylmuramoyl-L-alanine amidase DESAF_RS07805 PF01380 SIS domain DESAF_RS07810 PF01725 Ham1 family DESAF_RS07820 PF00919 Uncharacterized protein family UPF0004 DESAF_RS07820 PF18693 TRAM domain DESAF_RS07820 PF04055 Radical SAM superfamily DESAF_RS07825 PF00575 S1 RNA binding domain DESAF_RS07830 PF01343 Peptidase family S49 DESAF_RS07840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DESAF_RS07840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DESAF_RS07845 PF16199 Radical_SAM C-terminal domain DESAF_RS07845 PF04055 Radical SAM superfamily DESAF_RS07865 PF03717 Penicillin-binding Protein dimerisation domain DESAF_RS07865 PF00905 Penicillin binding protein transpeptidase domain DESAF_RS07870 PF01098 Cell cycle protein DESAF_RS07880 PF00430 ATP synthase B/B' CF(0) DESAF_RS07885 PF00430 ATP synthase B/B' CF(0) DESAF_RS07890 PF00213 ATP synthase delta (OSCP) subunit DESAF_RS07895 PF00306 ATP synthase alpha/beta chain, C terminal domain DESAF_RS07895 PF02874 ATP synthase alpha/beta family, beta-barrel domain DESAF_RS07895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DESAF_RS07900 PF00231 ATP synthase DESAF_RS07905 PF02874 ATP synthase alpha/beta family, beta-barrel domain DESAF_RS07905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DESAF_RS07910 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DESAF_RS07910 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DESAF_RS07915 PF12804 MobA-like NTP transferase domain DESAF_RS07915 PF00132 Bacterial transferase hexapeptide (six repeats) DESAF_RS07925 PF12072 Domain of unknown function (DUF3552) DESAF_RS07925 PF00013 KH domain DESAF_RS07925 PF01966 HD domain DESAF_RS07930 PF02435 Levansucrase/Invertase DESAF_RS07935 PF01740 STAS domain DESAF_RS07935 PF00916 Sulfate permease family DESAF_RS07940 PF13277 YmdB-like protein DESAF_RS07950 PF01479 S4 domain DESAF_RS07950 PF00579 tRNA synthetases class I (W and Y) DESAF_RS07960 PF01040 UbiA prenyltransferase family DESAF_RS07965 PF05958 tRNA (Uracil-5-)-methyltransferase DESAF_RS07965 PF01938 TRAM domain DESAF_RS07970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DESAF_RS07980 PF00381 PTS HPr component phosphorylation site DESAF_RS07985 PF00391 PEP-utilising enzyme, mobile domain DESAF_RS07985 PF02896 PEP-utilising enzyme, TIM barrel domain DESAF_RS07985 PF05524 PEP-utilising enzyme, N-terminal DESAF_RS07990 PF01668 SmpB protein DESAF_RS07995 PF02913 FAD linked oxidases, C-terminal domain DESAF_RS07995 PF01565 FAD binding domain DESAF_RS08005 PF07516 SecA Wing and Scaffold domain DESAF_RS08005 PF01043 SecA preprotein cross-linking domain DESAF_RS08005 PF07517 SecA DEAD-like domain DESAF_RS08005 PF02810 SEC-C motif DESAF_RS08020 PF02080 TrkA-C domain DESAF_RS08020 PF02254 TrkA-N domain DESAF_RS08025 PF00571 CBS domain DESAF_RS08030 PF01969 Protein of unknown function DUF111 DESAF_RS08050 PF14711 Respiratory nitrate reductase beta C-terminal DESAF_RS08050 PF13247 4Fe-4S dicluster domain DESAF_RS08055 PF00361 Proton-conducting membrane transporter DESAF_RS08060 PF00361 Proton-conducting membrane transporter DESAF_RS08060 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DESAF_RS08065 PF00361 Proton-conducting membrane transporter DESAF_RS08075 PF00361 Proton-conducting membrane transporter DESAF_RS08080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DESAF_RS08085 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DESAF_RS08090 PF00037 4Fe-4S binding domain DESAF_RS08095 PF00146 NADH dehydrogenase DESAF_RS08100 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DESAF_RS08105 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DESAF_RS08110 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DESAF_RS08115 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DESAF_RS08120 PF01568 Molydopterin dinucleotide binding domain DESAF_RS08120 PF00384 Molybdopterin oxidoreductase DESAF_RS08120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DESAF_RS08120 PF10518 TAT (twin-arginine translocation) pathway signal sequence DESAF_RS08135 PF04029 2-phosphosulpholactate phosphatase DESAF_RS08145 PF01026 TatD related DNase DESAF_RS08155 PF00535 Glycosyl transferase family 2 DESAF_RS08160 PF00011 Hsp20/alpha crystallin family DESAF_RS08165 PF00011 Hsp20/alpha crystallin family DESAF_RS08170 PF03966 Trm112p-like protein DESAF_RS08175 PF02811 PHP domain DESAF_RS08180 PF16325 Peptidase family U32 C-terminal domain DESAF_RS08180 PF01136 Peptidase family U32 DESAF_RS08215 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS08220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS08220 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS08225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DESAF_RS08225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DESAF_RS08235 PF02954 Bacterial regulatory protein, Fis family DESAF_RS08235 PF00158 Sigma-54 interaction domain DESAF_RS08235 PF00072 Response regulator receiver domain DESAF_RS08245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DESAF_RS08255 PF00924 Mechanosensitive ion channel DESAF_RS08275 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS08275 PF00072 Response regulator receiver domain DESAF_RS08275 PF00989 PAS fold DESAF_RS08275 PF01627 Hpt domain DESAF_RS08275 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS08285 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DESAF_RS08285 PF01297 Zinc-uptake complex component A periplasmic DESAF_RS08290 PF03773 Predicted permease DESAF_RS08300 PF01478 Type IV leader peptidase family DESAF_RS08300 PF06750 Bacterial Peptidase A24 N-terminal domain DESAF_RS08310 PF02310 B12 binding domain DESAF_RS08310 PF13282 Domain of unknown function (DUF4070) DESAF_RS08310 PF04055 Radical SAM superfamily DESAF_RS08315 PF03413 Peptidase propeptide and YPEB domain DESAF_RS08315 PF01447 Thermolysin metallopeptidase, catalytic domain DESAF_RS08315 PF02868 Thermolysin metallopeptidase, alpha-helical domain DESAF_RS08315 PF07504 Fungalysin/Thermolysin Propeptide Motif DESAF_RS08325 PF12704 MacB-like periplasmic core domain DESAF_RS08325 PF02687 FtsX-like permease family DESAF_RS08325 PF00005 ABC transporter DESAF_RS08340 PF00535 Glycosyl transferase family 2 DESAF_RS08350 PF04349 Periplasmic glucan biosynthesis protein, MdoG DESAF_RS08370 PF07568 Histidine kinase DESAF_RS08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS08370 PF12282 Signal transduction histidine kinase DESAF_RS08380 PF01594 AI-2E family transporter DESAF_RS08400 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS08400 PF17932 Tetracyclin repressor-like, C-terminal domain DESAF_RS08405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DESAF_RS08410 PF00890 FAD binding domain DESAF_RS08410 PF02910 Fumarate reductase flavoprotein C-term DESAF_RS08415 PF13085 2Fe-2S iron-sulfur cluster binding domain DESAF_RS08415 PF13183 4Fe-4S dicluster domain DESAF_RS08420 PF05681 Fumarate hydratase (Fumerase) DESAF_RS08425 PF05683 Fumarase C-terminus DESAF_RS08425 PF05681 Fumarate hydratase (Fumerase) DESAF_RS08430 PF03949 Malic enzyme, NAD binding domain DESAF_RS08430 PF01515 Phosphate acetyl/butaryl transferase DESAF_RS08430 PF00390 Malic enzyme, N-terminal domain DESAF_RS08435 PF00939 Sodium:sulfate symporter transmembrane region DESAF_RS08445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DESAF_RS08445 PF13237 4Fe-4S dicluster domain DESAF_RS08445 PF13375 RnfC Barrel sandwich hybrid domain DESAF_RS08445 PF10531 SLBB domain DESAF_RS08450 PF03116 NQR2, RnfD, RnfE family DESAF_RS08460 PF02508 Rnf-Nqr subunit, membrane protein DESAF_RS08465 PF02508 Rnf-Nqr subunit, membrane protein DESAF_RS08470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DESAF_RS08470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DESAF_RS08470 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS08485 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS08485 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS08485 PF00672 HAMP domain DESAF_RS08485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS08485 PF01627 Hpt domain DESAF_RS08485 PF00072 Response regulator receiver domain DESAF_RS08505 PF00005 ABC transporter DESAF_RS08510 PF01032 FecCD transport family DESAF_RS08545 PF00005 ABC transporter DESAF_RS08550 PF00563 EAL domain DESAF_RS08550 PF03707 Bacterial signalling protein N terminal repeat DESAF_RS08550 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS08555 PF00899 ThiF family DESAF_RS08565 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DESAF_RS08565 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DESAF_RS08575 PF00459 Inositol monophosphatase family DESAF_RS08595 PF01274 Malate synthase DESAF_RS08605 PF04055 Radical SAM superfamily DESAF_RS08610 PF04055 Radical SAM superfamily DESAF_RS08615 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS08620 PF02621 Menaquinone biosynthesis DESAF_RS08630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DESAF_RS08630 PF03466 LysR substrate binding domain DESAF_RS08645 PF00005 ABC transporter DESAF_RS08650 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS08655 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS08670 PF00072 Response regulator receiver domain DESAF_RS08670 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS08680 PF00465 Iron-containing alcohol dehydrogenase DESAF_RS08685 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS08685 PF00672 HAMP domain DESAF_RS08685 PF01627 Hpt domain DESAF_RS08685 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS08685 PF00072 Response regulator receiver domain DESAF_RS08690 PF00005 ABC transporter DESAF_RS08695 PF13472 GDSL-like Lipase/Acylhydrolase family DESAF_RS08705 PF08534 Redoxin DESAF_RS08715 PF01627 Hpt domain DESAF_RS08715 PF00672 HAMP domain DESAF_RS08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS08715 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS08715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DESAF_RS08715 PF00072 Response regulator receiver domain DESAF_RS08730 PF11700 Vacuole effluxer Atg22 like DESAF_RS08735 PF10011 Predicted membrane protein (DUF2254) DESAF_RS08745 PF06480 FtsH Extracellular DESAF_RS08745 PF01434 Peptidase family M41 DESAF_RS08745 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS08745 PF17862 AAA+ lid domain DESAF_RS08755 PF00155 Aminotransferase class I and II DESAF_RS08765 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DESAF_RS08770 PF00258 Flavodoxin DESAF_RS08770 PF00753 Metallo-beta-lactamase superfamily DESAF_RS08775 PF00301 Rubredoxin DESAF_RS08780 PF00301 Rubredoxin DESAF_RS08790 PF01594 AI-2E family transporter DESAF_RS08795 PF03741 Integral membrane protein TerC family DESAF_RS08805 PF13435 Cytochrome c554 and c-prime DESAF_RS08810 PF02769 AIR synthase related protein, C-terminal domain DESAF_RS08810 PF00586 AIR synthase related protein, N-terminal domain DESAF_RS08810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DESAF_RS08815 PF00348 Polyprenyl synthetase DESAF_RS08830 PF01209 ubiE/COQ5 methyltransferase family DESAF_RS08845 PF02085 Class III cytochrome C family DESAF_RS08850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DESAF_RS08855 PF01890 Cobalamin synthesis G C-terminus DESAF_RS08855 PF11761 Cobalamin biosynthesis central region DESAF_RS08855 PF11760 Cobalamin synthesis G N-terminal DESAF_RS08860 PF00571 CBS domain DESAF_RS08860 PF03471 Transporter associated domain DESAF_RS08860 PF01595 Cyclin M transmembrane N-terminal domain DESAF_RS08865 PF00529 HlyD membrane-fusion protein of T1SS DESAF_RS08865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DESAF_RS08870 PF00873 AcrB/AcrD/AcrF family DESAF_RS08875 PF00202 Aminotransferase class-III DESAF_RS08880 PF17805 AsnC-like ligand binding domain DESAF_RS08885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DESAF_RS08885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DESAF_RS08900 PF00672 HAMP domain DESAF_RS08900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS08900 PF13426 PAS domain DESAF_RS08910 PF00027 Cyclic nucleotide-binding domain DESAF_RS08910 PF13545 Crp-like helix-turn-helix domain DESAF_RS08915 PF02915 Rubrerythrin DESAF_RS08930 PF03951 Glutamine synthetase, beta-Grasp domain DESAF_RS08930 PF00120 Glutamine synthetase, catalytic domain DESAF_RS08940 PF18318 Glutamine synthetase C-terminal domain DESAF_RS08940 PF12437 Glutamine synthetase type III N terminal DESAF_RS08940 PF00120 Glutamine synthetase, catalytic domain DESAF_RS08945 PF08402 TOBE domain DESAF_RS08945 PF00005 ABC transporter DESAF_RS08955 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS08965 PF09308 LuxQ, periplasmic DESAF_RS08965 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS08965 PF00072 Response regulator receiver domain DESAF_RS08970 PF12849 PBP superfamily domain DESAF_RS08980 PF02634 FdhD/NarQ family DESAF_RS08985 PF12804 MobA-like NTP transferase domain DESAF_RS08990 PF06463 Molybdenum Cofactor Synthesis C DESAF_RS08990 PF04055 Radical SAM superfamily DESAF_RS09005 PF00384 Molybdopterin oxidoreductase DESAF_RS09005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DESAF_RS09005 PF01568 Molydopterin dinucleotide binding domain DESAF_RS09010 PF01568 Molydopterin dinucleotide binding domain DESAF_RS09010 PF00384 Molybdopterin oxidoreductase DESAF_RS09010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DESAF_RS09015 PF13247 4Fe-4S dicluster domain DESAF_RS09020 PF04030 D-arabinono-1,4-lactone oxidase DESAF_RS09020 PF01565 FAD binding domain DESAF_RS09030 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS09030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DESAF_RS09035 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DESAF_RS09035 PF00175 Oxidoreductase NAD-binding domain DESAF_RS09035 PF00970 Oxidoreductase FAD-binding domain DESAF_RS09040 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DESAF_RS09045 PF01869 BadF/BadG/BcrA/BcrD ATPase family DESAF_RS09055 PF13443 Cro/C1-type HTH DNA-binding domain DESAF_RS09065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS09065 PF07730 Histidine kinase DESAF_RS09070 PF00072 Response regulator receiver domain DESAF_RS09070 PF00196 Bacterial regulatory proteins, luxR family DESAF_RS09075 PF00753 Metallo-beta-lactamase superfamily DESAF_RS09075 PF00581 Rhodanese-like domain DESAF_RS09090 PF00301 Rubredoxin DESAF_RS09100 PF01883 Iron-sulfur cluster assembly protein DESAF_RS09100 PF10609 NUBPL iron-transfer P-loop NTPase DESAF_RS09135 PF01590 GAF domain DESAF_RS09135 PF00158 Sigma-54 interaction domain DESAF_RS09145 PF10609 NUBPL iron-transfer P-loop NTPase DESAF_RS09145 PF01883 Iron-sulfur cluster assembly protein DESAF_RS09155 PF00158 Sigma-54 interaction domain DESAF_RS09155 PF02954 Bacterial regulatory protein, Fis family DESAF_RS09155 PF00072 Response regulator receiver domain DESAF_RS09160 PF01888 CbiD DESAF_RS09165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DESAF_RS09165 PF07685 CobB/CobQ-like glutamine amidotransferase domain DESAF_RS09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS09170 PF01627 Hpt domain DESAF_RS09170 PF00072 Response regulator receiver domain DESAF_RS09170 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS09175 PF13193 AMP-binding enzyme C-terminal domain DESAF_RS09175 PF00501 AMP-binding enzyme DESAF_RS09180 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS09180 PF09456 RcsC Alpha-Beta-Loop (ABL) DESAF_RS09180 PF00072 Response regulator receiver domain DESAF_RS09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS09185 PF02874 ATP synthase alpha/beta family, beta-barrel domain DESAF_RS09185 PF18269 T3SS EscN ATPase C-terminal domain DESAF_RS09185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DESAF_RS09195 PF01706 FliG C-terminal domain DESAF_RS09195 PF14842 FliG N-terminal domain DESAF_RS09195 PF14841 FliG middle domain DESAF_RS09200 PF01514 Secretory protein of YscJ/FliF family DESAF_RS09200 PF08345 Flagellar M-ring protein C-terminal DESAF_RS09205 PF02049 Flagellar hook-basal body complex protein FliE DESAF_RS09210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DESAF_RS09210 PF00460 Flagella basal body rod protein DESAF_RS09215 PF00460 Flagella basal body rod protein DESAF_RS09225 PF02142 MGS-like domain DESAF_RS09225 PF01808 AICARFT/IMPCHase bienzyme DESAF_RS09230 PF16360 GTP-binding GTPase Middle Region DESAF_RS09230 PF01926 50S ribosome-binding GTPase DESAF_RS09230 PF13167 GTP-binding GTPase N-terminal DESAF_RS09245 PF02254 TrkA-N domain DESAF_RS09245 PF00999 Sodium/hydrogen exchanger family DESAF_RS09250 PF02163 Peptidase family M50 DESAF_RS09250 PF00571 CBS domain DESAF_RS09255 PF14791 DNA polymerase beta thumb DESAF_RS09255 PF14716 Helix-hairpin-helix domain DESAF_RS09255 PF02811 PHP domain DESAF_RS09260 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DESAF_RS09270 PF02660 Glycerol-3-phosphate acyltransferase DESAF_RS09275 PF00575 S1 RNA binding domain DESAF_RS09275 PF00773 RNB domain DESAF_RS09275 PF08206 Ribonuclease B OB domain DESAF_RS09280 PF02142 MGS-like domain DESAF_RS09280 PF01808 AICARFT/IMPCHase bienzyme DESAF_RS09290 PF01464 Transglycosylase SLT domain DESAF_RS09290 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS09295 PF00709 Adenylosuccinate synthetase DESAF_RS09315 PF02754 Cysteine-rich domain DESAF_RS09325 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS09325 PF04324 BFD-like [2Fe-2S] binding domain DESAF_RS09340 PF17806 Sarcosine oxidase A3 domain DESAF_RS09340 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS09340 PF08669 Glycine cleavage T-protein C-terminal barrel domain DESAF_RS09340 PF01571 Aminomethyltransferase folate-binding domain DESAF_RS09350 PF08448 PAS fold DESAF_RS09350 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS09350 PF13188 PAS domain DESAF_RS09350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS09350 PF00072 Response regulator receiver domain DESAF_RS09355 PF02954 Bacterial regulatory protein, Fis family DESAF_RS09355 PF00072 Response regulator receiver domain DESAF_RS09355 PF00158 Sigma-54 interaction domain DESAF_RS09360 PF00290 Tryptophan synthase alpha chain DESAF_RS09365 PF00291 Pyridoxal-phosphate dependent enzyme DESAF_RS09370 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DESAF_RS09375 PF00218 Indole-3-glycerol phosphate synthase DESAF_RS09380 PF00591 Glycosyl transferase family, a/b domain DESAF_RS09380 PF02885 Glycosyl transferase family, helical bundle domain DESAF_RS09385 PF00117 Glutamine amidotransferase class-I DESAF_RS09390 PF00425 chorismate binding enzyme DESAF_RS09390 PF04715 Anthranilate synthase component I, N terminal region DESAF_RS09395 PF01817 Chorismate mutase type II DESAF_RS09395 PF02153 Prephenate dehydrogenase DESAF_RS09400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DESAF_RS09405 PF01842 ACT domain DESAF_RS09405 PF01817 Chorismate mutase type II DESAF_RS09405 PF00800 Prephenate dehydratase DESAF_RS09410 PF01959 3-dehydroquinate synthase II DESAF_RS09415 PF01791 DeoC/LacD family aldolase DESAF_RS09420 PF00909 Ammonium Transporter Family DESAF_RS09425 PF00543 Nitrogen regulatory protein P-II DESAF_RS09440 PF02397 Bacterial sugar transferase DESAF_RS09450 PF00857 Isochorismatase family DESAF_RS09465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS09465 PF00672 HAMP domain DESAF_RS09465 PF13426 PAS domain DESAF_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS09480 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS09495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DESAF_RS09500 PF16658 Class II release factor RF3, C-terminal domain DESAF_RS09500 PF03144 Elongation factor Tu domain 2 DESAF_RS09500 PF00009 Elongation factor Tu GTP binding domain DESAF_RS09515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DESAF_RS09615 PF17482 Phage tail sheath C-terminal domain DESAF_RS09615 PF04984 Phage tail sheath protein subtilisin-like domain DESAF_RS09690 PF00565 Staphylococcal nuclease homologue DESAF_RS09800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DESAF_RS09800 PF02403 Seryl-tRNA synthetase N-terminal domain DESAF_RS09810 PF18146 Damage-inducible protein CinA KH domain DESAF_RS09810 PF02464 Competence-damaged protein DESAF_RS09810 PF00994 Probable molybdopterin binding domain DESAF_RS09825 PF00582 Universal stress protein family DESAF_RS09830 PF00155 Aminotransferase class I and II DESAF_RS09835 PF02224 Cytidylate kinase DESAF_RS09850 PF00919 Uncharacterized protein family UPF0004 DESAF_RS09850 PF01938 TRAM domain DESAF_RS09850 PF04055 Radical SAM superfamily DESAF_RS09860 PF05193 Peptidase M16 inactive domain DESAF_RS09860 PF00675 Insulinase (Peptidase family M16) DESAF_RS09880 PF00881 Nitroreductase family DESAF_RS09880 PF01996 F420-0:Gamma-glutamyl ligase DESAF_RS09885 PF00753 Metallo-beta-lactamase superfamily DESAF_RS09885 PF16123 Hydroxyacylglutathione hydrolase C-terminus DESAF_RS09895 PF00156 Phosphoribosyl transferase domain DESAF_RS09900 PF00857 Isochorismatase family DESAF_RS09910 PF00829 Ribosomal prokaryotic L21 protein DESAF_RS09915 PF01016 Ribosomal L27 protein DESAF_RS09920 PF02525 Flavodoxin-like fold DESAF_RS09925 PF01018 GTP1/OBG DESAF_RS09925 PF01926 50S ribosome-binding GTPase DESAF_RS09930 PF01472 PUA domain DESAF_RS09930 PF00696 Amino acid kinase family DESAF_RS09940 PF00672 HAMP domain DESAF_RS09940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS09940 PF13426 PAS domain DESAF_RS09975 PF00005 ABC transporter DESAF_RS09980 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS09985 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS09990 PF12849 PBP superfamily domain DESAF_RS10000 PF00271 Helicase conserved C-terminal domain DESAF_RS10000 PF00270 DEAD/DEAH box helicase DESAF_RS10005 PF01170 Putative RNA methylase family UPF0020 DESAF_RS10005 PF02926 THUMP domain DESAF_RS10010 PF02743 Cache domain DESAF_RS10010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS10010 PF00672 HAMP domain DESAF_RS10030 PF00873 AcrB/AcrD/AcrF family DESAF_RS10035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DESAF_RS10060 PF02954 Bacterial regulatory protein, Fis family DESAF_RS10060 PF00158 Sigma-54 interaction domain DESAF_RS10060 PF00072 Response regulator receiver domain DESAF_RS10065 PF08448 PAS fold DESAF_RS10065 PF08447 PAS fold DESAF_RS10065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS10075 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS10075 PF00672 HAMP domain DESAF_RS10075 PF16750 Sensor domain of 2-component histidine kinase DESAF_RS10080 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS10080 PF00072 Response regulator receiver domain DESAF_RS10085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DESAF_RS10090 PF12704 MacB-like periplasmic core domain DESAF_RS10090 PF00005 ABC transporter DESAF_RS10090 PF02687 FtsX-like permease family DESAF_RS10095 PF02321 Outer membrane efflux protein DESAF_RS10105 PF00216 Bacterial DNA-binding protein DESAF_RS10115 PF00862 Sucrose synthase DESAF_RS10115 PF00534 Glycosyl transferases group 1 DESAF_RS10135 PF08678 Rsbr N terminal DESAF_RS10135 PF01740 STAS domain DESAF_RS10140 PF01740 STAS domain DESAF_RS10145 PF13581 Histidine kinase-like ATPase domain DESAF_RS10155 PF00360 Phytochrome region DESAF_RS10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS10155 PF08446 PAS fold DESAF_RS10155 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS10155 PF01590 GAF domain DESAF_RS10160 PF00072 Response regulator receiver domain DESAF_RS10165 PF00989 PAS fold DESAF_RS10165 PF01627 Hpt domain DESAF_RS10165 PF18415 Histidine kinase receptor ArcB trans-membrane domain DESAF_RS10165 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS10165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS10165 PF00072 Response regulator receiver domain DESAF_RS10185 PF00941 FAD binding domain in molybdopterin dehydrogenase DESAF_RS10185 PF03450 CO dehydrogenase flavoprotein C-terminal domain DESAF_RS10190 PF01799 [2Fe-2S] binding domain DESAF_RS10190 PF00111 2Fe-2S iron-sulfur cluster binding domain DESAF_RS10195 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DESAF_RS10195 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DESAF_RS10205 PF00155 Aminotransferase class I and II DESAF_RS10215 PF01740 STAS domain DESAF_RS10220 PF00672 HAMP domain DESAF_RS10220 PF07228 Stage II sporulation protein E (SpoIIE) DESAF_RS10225 PF09084 NMT1/THI5 like DESAF_RS10235 PF04199 Putative cyclase DESAF_RS10245 PF00753 Metallo-beta-lactamase superfamily DESAF_RS10270 PF03819 MazG nucleotide pyrophosphohydrolase domain DESAF_RS10270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DESAF_RS10285 PF00474 Sodium:solute symporter family DESAF_RS10300 PF00929 Exonuclease DESAF_RS10335 PF00989 PAS fold DESAF_RS10335 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS10335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS10340 PF00072 Response regulator receiver domain DESAF_RS10340 PF12833 Helix-turn-helix domain DESAF_RS10350 PF02954 Bacterial regulatory protein, Fis family DESAF_RS10350 PF00072 Response regulator receiver domain DESAF_RS10350 PF00158 Sigma-54 interaction domain DESAF_RS10365 PF01965 DJ-1/PfpI family DESAF_RS10370 PF01411 tRNA synthetases class II (A) DESAF_RS10370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DESAF_RS10370 PF02272 DHHA1 domain DESAF_RS10380 PF00154 recA bacterial DNA recombination protein DESAF_RS10390 PF01027 Inhibitor of apoptosis-promoting Bax1 DESAF_RS10395 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DESAF_RS10400 PF00575 S1 RNA binding domain DESAF_RS10400 PF08206 Ribonuclease B OB domain DESAF_RS10400 PF17876 Cold shock domain DESAF_RS10400 PF00773 RNB domain DESAF_RS10415 PF00535 Glycosyl transferase family 2 DESAF_RS10440 PF00850 Histone deacetylase domain DESAF_RS10450 PF07478 D-ala D-ala ligase C-terminus DESAF_RS10450 PF01820 D-ala D-ala ligase N-terminus DESAF_RS10455 PF07478 D-ala D-ala ligase C-terminus DESAF_RS10455 PF01820 D-ala D-ala ligase N-terminus DESAF_RS10460 PF12544 Lysine-2,3-aminomutase DESAF_RS10460 PF04055 Radical SAM superfamily DESAF_RS10470 PF00072 Response regulator receiver domain DESAF_RS10470 PF00158 Sigma-54 interaction domain DESAF_RS10470 PF02954 Bacterial regulatory protein, Fis family DESAF_RS10495 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DESAF_RS10500 PF02502 Ribose/Galactose Isomerase DESAF_RS10525 PF04545 Sigma-70, region 4 DESAF_RS10525 PF04542 Sigma-70 region 2 DESAF_RS10525 PF00140 Sigma-70 factor, region 1.2 DESAF_RS10530 PF02574 Homocysteine S-methyltransferase DESAF_RS10530 PF02965 Vitamin B12 dependent methionine synthase, activation domain DESAF_RS10530 PF00809 Pterin binding enzyme DESAF_RS10530 PF02607 B12 binding domain DESAF_RS10530 PF02310 B12 binding domain DESAF_RS10535 PF00578 AhpC/TSA family DESAF_RS10540 PF00583 Acetyltransferase (GNAT) family DESAF_RS10545 PF00156 Phosphoribosyl transferase domain DESAF_RS10555 PF18073 Rubredoxin metal binding domain DESAF_RS10555 PF06745 KaiC DESAF_RS10565 PF00892 EamA-like transporter family DESAF_RS10570 PF00700 Bacterial flagellin C-terminal helical region DESAF_RS10570 PF00669 Bacterial flagellin N-terminal helical region DESAF_RS10575 PF01551 Peptidase family M23 DESAF_RS10605 PF04055 Radical SAM superfamily DESAF_RS10605 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DESAF_RS10615 PF17768 RecJ OB domain DESAF_RS10615 PF02272 DHHA1 domain DESAF_RS10615 PF01368 DHH family DESAF_RS10615 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DESAF_RS10625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DESAF_RS10630 PF00625 Guanylate kinase DESAF_RS10635 PF04025 Domain of unknown function (DUF370) DESAF_RS10640 PF08340 Domain of unknown function (DUF1732) DESAF_RS10640 PF03755 YicC-like family, N-terminal region DESAF_RS10645 PF04055 Radical SAM superfamily DESAF_RS10645 PF00919 Uncharacterized protein family UPF0004 DESAF_RS10645 PF01938 TRAM domain DESAF_RS10670 PF01425 Amidase DESAF_RS10675 PF02686 Glu-tRNAGln amidotransferase C subunit DESAF_RS10685 PF00012 Hsp70 protein DESAF_RS10690 PF01025 GrpE DESAF_RS10695 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DESAF_RS10695 PF01628 HrcA protein C terminal domain DESAF_RS10700 PF04321 RmlD substrate binding domain DESAF_RS10705 PF16363 GDP-mannose 4,6 dehydratase DESAF_RS10715 PF00588 SpoU rRNA Methylase family DESAF_RS10735 PF00970 Oxidoreductase FAD-binding domain DESAF_RS10735 PF00111 2Fe-2S iron-sulfur cluster binding domain DESAF_RS10735 PF00175 Oxidoreductase NAD-binding domain DESAF_RS10745 PF00374 Nickel-dependent hydrogenase DESAF_RS10750 PF03186 CobD/Cbib protein DESAF_RS10760 PF14748 Pyrroline-5-carboxylate reductase dimerisation DESAF_RS10760 PF03807 NADP oxidoreductase coenzyme F420-dependent DESAF_RS10765 PF00334 Nucleoside diphosphate kinase DESAF_RS10770 PF09383 NIL domain DESAF_RS10770 PF00005 ABC transporter DESAF_RS10775 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS10785 PF04748 Divergent polysaccharide deacetylase DESAF_RS10790 PF13180 PDZ domain DESAF_RS10790 PF03572 Peptidase family S41 DESAF_RS10795 PF01551 Peptidase family M23 DESAF_RS10795 PF01476 LysM domain DESAF_RS10815 PF03193 RsgA GTPase DESAF_RS10820 PF01022 Bacterial regulatory protein, arsR family DESAF_RS10835 PF00085 Thioredoxin DESAF_RS10850 PF00085 Thioredoxin DESAF_RS10865 PF13847 Methyltransferase domain DESAF_RS10870 PF01022 Bacterial regulatory protein, arsR family DESAF_RS10875 PF01758 Sodium Bile acid symporter family DESAF_RS10880 PF01451 Low molecular weight phosphotyrosine protein phosphatase DESAF_RS10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS10885 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS10885 PF00072 Response regulator receiver domain DESAF_RS10885 PF13188 PAS domain DESAF_RS10885 PF08448 PAS fold DESAF_RS10890 PF00072 Response regulator receiver domain DESAF_RS10890 PF02954 Bacterial regulatory protein, Fis family DESAF_RS10890 PF00158 Sigma-54 interaction domain DESAF_RS10895 PF05362 Lon protease (S16) C-terminal proteolytic domain DESAF_RS10895 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS10895 PF02190 ATP-dependent protease La (LON) substrate-binding domain DESAF_RS10910 PF01925 Sulfite exporter TauE/SafE DESAF_RS10920 PF16921 Tex protein YqgF-like domain DESAF_RS10920 PF09371 Tex-like protein N-terminal domain DESAF_RS10920 PF00575 S1 RNA binding domain DESAF_RS10920 PF17674 HHH domain DESAF_RS10935 PF13183 4Fe-4S dicluster domain DESAF_RS10935 PF11870 Domain of unknown function (DUF3390) DESAF_RS10935 PF02589 LUD domain DESAF_RS10945 PF00871 Acetokinase family DESAF_RS10950 PF01515 Phosphate acetyl/butaryl transferase DESAF_RS10950 PF07085 DRTGG domain DESAF_RS10955 PF02754 Cysteine-rich domain DESAF_RS10960 PF02913 FAD linked oxidases, C-terminal domain DESAF_RS10960 PF01565 FAD binding domain DESAF_RS10965 PF02652 L-lactate permease DESAF_RS10970 PF02652 L-lactate permease DESAF_RS10975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DESAF_RS10975 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DESAF_RS10975 PF10371 Domain of unknown function DESAF_RS10975 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DESAF_RS10975 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DESAF_RS10980 PF00072 Response regulator receiver domain DESAF_RS10980 PF00158 Sigma-54 interaction domain DESAF_RS10980 PF02954 Bacterial regulatory protein, Fis family DESAF_RS10985 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS10990 PF00164 Ribosomal protein S12/S23 DESAF_RS10995 PF00177 Ribosomal protein S7p/S5e DESAF_RS11000 PF00679 Elongation factor G C-terminus DESAF_RS11000 PF14492 Elongation Factor G, domain II DESAF_RS11000 PF03764 Elongation factor G, domain IV DESAF_RS11000 PF00009 Elongation factor Tu GTP binding domain DESAF_RS11000 PF03144 Elongation factor Tu domain 2 DESAF_RS11005 PF03143 Elongation factor Tu C-terminal domain DESAF_RS11005 PF03144 Elongation factor Tu domain 2 DESAF_RS11005 PF00009 Elongation factor Tu GTP binding domain DESAF_RS11010 PF00338 Ribosomal protein S10p/S20e DESAF_RS11015 PF00297 Ribosomal protein L3 DESAF_RS11020 PF00573 Ribosomal protein L4/L1 family DESAF_RS11025 PF00276 Ribosomal protein L23 DESAF_RS11030 PF03947 Ribosomal Proteins L2, C-terminal domain DESAF_RS11030 PF00181 Ribosomal Proteins L2, RNA binding domain DESAF_RS11035 PF00203 Ribosomal protein S19 DESAF_RS11040 PF00237 Ribosomal protein L22p/L17e DESAF_RS11045 PF00189 Ribosomal protein S3, C-terminal domain DESAF_RS11045 PF07650 KH domain DESAF_RS11050 PF00252 Ribosomal protein L16p/L10e DESAF_RS11055 PF00831 Ribosomal L29 protein DESAF_RS11060 PF00366 Ribosomal protein S17 DESAF_RS11065 PF00238 Ribosomal protein L14p/L23e DESAF_RS11070 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DESAF_RS11070 PF00467 KOW motif DESAF_RS11075 PF00281 Ribosomal protein L5 DESAF_RS11075 PF00673 ribosomal L5P family C-terminus DESAF_RS11080 PF00410 Ribosomal protein S8 DESAF_RS11085 PF00347 Ribosomal protein L6 DESAF_RS11090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DESAF_RS11095 PF03719 Ribosomal protein S5, C-terminal domain DESAF_RS11095 PF00333 Ribosomal protein S5, N-terminal domain DESAF_RS11100 PF00327 Ribosomal protein L30p/L7e DESAF_RS11105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DESAF_RS11110 PF00344 SecY translocase DESAF_RS11115 PF00557 Metallopeptidase family M24 DESAF_RS11120 PF00416 Ribosomal protein S13/S18 DESAF_RS11125 PF00411 Ribosomal protein S11 DESAF_RS11130 PF00163 Ribosomal protein S4/S9 N-terminal domain DESAF_RS11130 PF01479 S4 domain DESAF_RS11135 PF01000 RNA polymerase Rpb3/RpoA insert domain DESAF_RS11135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DESAF_RS11135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DESAF_RS11140 PF01196 Ribosomal protein L17 DESAF_RS11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DESAF_RS11145 PF03466 LysR substrate binding domain DESAF_RS11155 PF00155 Aminotransferase class I and II DESAF_RS11165 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS11185 PF02586 SOS response associated peptidase (SRAP) DESAF_RS11210 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DESAF_RS11220 PF14331 ImcF-related N-terminal domain DESAF_RS11220 PF06761 Intracellular multiplication and human macrophage-killing DESAF_RS11220 PF06744 Type VI secretion protein IcmF C-terminal DESAF_RS11240 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DESAF_RS11245 PF05638 Type VI secretion system effector, Hcp DESAF_RS11255 PF05947 Type VI secretion system, TssF DESAF_RS11265 PF10431 C-terminal, D2-small domain, of ClpB protein DESAF_RS11265 PF17871 AAA lid domain DESAF_RS11265 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS11265 PF07724 AAA domain (Cdc48 subfamily) DESAF_RS11275 PF06715 Gp5 C-terminal repeat (3 copies) DESAF_RS11275 PF04717 Type VI secretion system, phage-baseplate injector DESAF_RS11310 PF00226 DnaJ domain DESAF_RS11310 PF01556 DnaJ C terminal domain DESAF_RS11320 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS11320 PF17871 AAA lid domain DESAF_RS11320 PF10431 C-terminal, D2-small domain, of ClpB protein DESAF_RS11320 PF02861 Clp amino terminal domain, pathogenicity island component DESAF_RS11320 PF07724 AAA domain (Cdc48 subfamily) DESAF_RS11325 PF02525 Flavodoxin-like fold DESAF_RS11340 PF00291 Pyridoxal-phosphate dependent enzyme DESAF_RS11345 PF00313 'Cold-shock' DNA-binding domain DESAF_RS11350 PF01176 Translation initiation factor 1A / IF-1 DESAF_RS11365 PF01048 Phosphorylase superfamily DESAF_RS11370 PF01618 MotA/TolQ/ExbB proton channel family DESAF_RS11375 PF13677 Membrane MotB of proton-channel complex MotA/MotB DESAF_RS11375 PF00691 OmpA family DESAF_RS11385 PF02785 Biotin carboxylase C-terminal domain DESAF_RS11385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DESAF_RS11385 PF00289 Biotin carboxylase, N-terminal domain DESAF_RS11390 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DESAF_RS11420 PF00989 PAS fold DESAF_RS11420 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS11420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS11425 PF00563 EAL domain DESAF_RS11425 PF13188 PAS domain DESAF_RS11425 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS11425 PF03707 Bacterial signalling protein N terminal repeat DESAF_RS11430 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS11430 PF00072 Response regulator receiver domain DESAF_RS11435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DESAF_RS11435 PF02896 PEP-utilising enzyme, TIM barrel domain DESAF_RS11435 PF00391 PEP-utilising enzyme, mobile domain DESAF_RS11480 PF01047 MarR family DESAF_RS11495 PF00069 Protein kinase domain DESAF_RS11495 PF03793 PASTA domain DESAF_RS11500 PF06968 Biotin and Thiamin Synthesis associated domain DESAF_RS11500 PF04055 Radical SAM superfamily DESAF_RS11520 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS11545 PF02540 NAD synthase DESAF_RS11545 PF00117 Glutamine amidotransferase class-I DESAF_RS11545 PF00958 GMP synthase C terminal domain DESAF_RS11555 PF16363 GDP-mannose 4,6 dehydratase DESAF_RS11560 PF01370 NAD dependent epimerase/dehydratase family DESAF_RS11565 PF08448 PAS fold DESAF_RS11565 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS11575 PF14572 Phosphoribosyl synthetase-associated domain DESAF_RS11575 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DESAF_RS11585 PF01584 CheW-like domain DESAF_RS11590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS11590 PF00672 HAMP domain DESAF_RS11590 PF02743 Cache domain DESAF_RS11630 PF01914 MarC family integral membrane protein DESAF_RS11650 PF00005 ABC transporter DESAF_RS11650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DESAF_RS11655 PF00005 ABC transporter DESAF_RS11655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DESAF_RS11660 PF01134 Glucose inhibited division protein A DESAF_RS11670 PF17200 Single Cache domain 2 DESAF_RS11670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS11670 PF00672 HAMP domain DESAF_RS11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS11705 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS11710 PF05362 Lon protease (S16) C-terminal proteolytic domain DESAF_RS11710 PF02190 ATP-dependent protease La (LON) substrate-binding domain DESAF_RS11710 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS11715 PF00708 Acylphosphatase DESAF_RS11720 PF04002 RadC-like JAB domain DESAF_RS11735 PF00133 tRNA synthetases class I (I, L, M and V) DESAF_RS11735 PF08264 Anticodon-binding domain of tRNA DESAF_RS11735 PF13603 Leucyl-tRNA synthetase, Domain 2 DESAF_RS11740 PF01029 NusB family DESAF_RS11745 PF00885 6,7-dimethyl-8-ribityllumazine synthase DESAF_RS11750 PF00925 GTP cyclohydrolase II DESAF_RS11750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DESAF_RS11755 PF00677 Lumazine binding domain DESAF_RS11760 PF01872 RibD C-terminal domain DESAF_RS11760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DESAF_RS11770 PF00464 Serine hydroxymethyltransferase DESAF_RS11775 PF00109 Beta-ketoacyl synthase, N-terminal domain DESAF_RS11775 PF02801 Beta-ketoacyl synthase, C-terminal domain DESAF_RS11780 PF00550 Phosphopantetheine attachment site DESAF_RS11790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DESAF_RS11790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DESAF_RS11795 PF02504 Fatty acid synthesis protein DESAF_RS11800 PF01783 Ribosomal L32p protein family DESAF_RS11810 PF00830 Ribosomal L28 family DESAF_RS11815 PF00196 Bacterial regulatory proteins, luxR family DESAF_RS11845 PF02954 Bacterial regulatory protein, Fis family DESAF_RS11845 PF00158 Sigma-54 interaction domain DESAF_RS11845 PF00072 Response regulator receiver domain DESAF_RS11865 PF01627 Hpt domain DESAF_RS11865 PF00672 HAMP domain DESAF_RS11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS11865 PF00072 Response regulator receiver domain DESAF_RS11865 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS11865 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS11870 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS11875 PF13801 Heavy-metal resistance DESAF_RS11880 PF01106 NifU-like domain DESAF_RS11885 PF00749 tRNA synthetases class I (E and Q), catalytic domain DESAF_RS11895 PF12627 Probable RNA and SrmB- binding site of polymerase A DESAF_RS11895 PF01743 Poly A polymerase head domain DESAF_RS11895 PF01966 HD domain DESAF_RS11900 PF00072 Response regulator receiver domain DESAF_RS11905 PF00155 Aminotransferase class I and II DESAF_RS11910 PF17762 HTH domain found in ParB protein DESAF_RS11910 PF02195 ParB-like nuclease domain DESAF_RS11925 PF04227 Indigoidine synthase A like protein DESAF_RS11930 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS11935 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS11940 PF00005 ABC transporter DESAF_RS11945 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS11960 PF02223 Thymidylate kinase DESAF_RS11965 PF01336 OB-fold nucleic acid binding domain DESAF_RS11965 PF01966 HD domain DESAF_RS11970 PF03150 Di-haem cytochrome c peroxidase DESAF_RS11975 PF07731 Multicopper oxidase DESAF_RS11975 PF00394 Multicopper oxidase DESAF_RS11975 PF07732 Multicopper oxidase DESAF_RS11980 PF01975 Survival protein SurE DESAF_RS11985 PF01116 Fructose-bisphosphate aldolase class-II DESAF_RS11990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DESAF_RS11990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DESAF_RS11995 PF13426 PAS domain DESAF_RS11995 PF13581 Histidine kinase-like ATPase domain DESAF_RS11995 PF07568 Histidine kinase DESAF_RS12000 PF01336 OB-fold nucleic acid binding domain DESAF_RS12000 PF02811 PHP domain DESAF_RS12000 PF14579 Helix-hairpin-helix motif DESAF_RS12000 PF07733 Bacterial DNA polymerase III alpha NTPase domain DESAF_RS12000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DESAF_RS12015 PF02580 D-Tyr-tRNA(Tyr) deacylase DESAF_RS12035 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DESAF_RS12045 PF03963 Flagellar hook capping protein - N-terminal region DESAF_RS12050 PF00460 Flagella basal body rod protein DESAF_RS12050 PF07559 Flagellar basal body protein FlaE DESAF_RS12050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DESAF_RS12055 PF00669 Bacterial flagellin N-terminal helical region DESAF_RS12055 PF00700 Bacterial flagellin C-terminal helical region DESAF_RS12060 PF00035 Double-stranded RNA binding motif DESAF_RS12060 PF14622 Ribonuclease-III-like DESAF_RS12065 PF07085 DRTGG domain DESAF_RS12070 PF00075 RNase H DESAF_RS12090 PF03741 Integral membrane protein TerC family DESAF_RS12100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DESAF_RS12100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DESAF_RS12100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DESAF_RS12100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DESAF_RS12105 PF01370 NAD dependent epimerase/dehydratase family DESAF_RS12120 PF03734 L,D-transpeptidase catalytic domain DESAF_RS12125 PF00156 Phosphoribosyl transferase domain DESAF_RS12130 PF00206 Lyase DESAF_RS12130 PF10397 Adenylosuccinate lyase C-terminus DESAF_RS12140 PF00994 Probable molybdopterin binding domain DESAF_RS12140 PF02464 Competence-damaged protein DESAF_RS12145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DESAF_RS12145 PF03459 TOBE domain DESAF_RS12150 PF01554 MatE DESAF_RS12160 PF04607 Region found in RelA / SpoT proteins DESAF_RS12170 PF00877 NlpC/P60 family DESAF_RS12175 PF13406 Transglycosylase SLT domain DESAF_RS12185 PF00557 Metallopeptidase family M24 DESAF_RS12185 PF01321 Creatinase/Prolidase N-terminal domain DESAF_RS12200 PF00534 Glycosyl transferases group 1 DESAF_RS12200 PF13477 Glycosyl transferase 4-like DESAF_RS12205 PF00535 Glycosyl transferase family 2 DESAF_RS12210 PF00731 AIR carboxylase DESAF_RS12215 PF00158 Sigma-54 interaction domain DESAF_RS12215 PF02954 Bacterial regulatory protein, Fis family DESAF_RS12245 PF01609 Transposase DDE domain DESAF_RS12255 PF00176 SNF2 family N-terminal domain DESAF_RS12255 PF00271 Helicase conserved C-terminal domain DESAF_RS12255 PF12419 SNF2 Helicase protein DESAF_RS12260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DESAF_RS12265 PF04607 Region found in RelA / SpoT proteins DESAF_RS12265 PF02824 TGS domain DESAF_RS12265 PF13291 ACT domain DESAF_RS12270 PF01594 AI-2E family transporter DESAF_RS12275 PF03631 Virulence factor BrkB DESAF_RS12290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DESAF_RS12290 PF13247 4Fe-4S dicluster domain DESAF_RS12290 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS12295 PF02779 Transketolase, pyrimidine binding domain DESAF_RS12295 PF00456 Transketolase, thiamine diphosphate binding domain DESAF_RS12295 PF02780 Transketolase, C-terminal domain DESAF_RS12300 PF00085 Thioredoxin DESAF_RS12305 PF00005 ABC transporter DESAF_RS12310 PF01895 PhoU domain DESAF_RS12320 PF02080 TrkA-C domain DESAF_RS12320 PF18030 RimK PreATP-grasp domain DESAF_RS12320 PF08443 RimK-like ATP-grasp domain DESAF_RS12325 PF04107 Glutamate-cysteine ligase family 2(GCS2) DESAF_RS12335 PF00989 PAS fold DESAF_RS12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS12335 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS12340 PF00072 Response regulator receiver domain DESAF_RS12350 PF00486 Transcriptional regulatory protein, C terminal DESAF_RS12350 PF00072 Response regulator receiver domain DESAF_RS12355 PF00989 PAS fold DESAF_RS12355 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS12365 PF02954 Bacterial regulatory protein, Fis family DESAF_RS12365 PF00072 Response regulator receiver domain DESAF_RS12365 PF00158 Sigma-54 interaction domain DESAF_RS12380 PF00072 Response regulator receiver domain DESAF_RS12380 PF02954 Bacterial regulatory protein, Fis family DESAF_RS12380 PF00158 Sigma-54 interaction domain DESAF_RS12385 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS12390 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS12395 PF08402 TOBE domain DESAF_RS12395 PF00005 ABC transporter DESAF_RS12400 PF13416 Bacterial extracellular solute-binding protein DESAF_RS12425 PF09190 DALR domain DESAF_RS12425 PF01406 tRNA synthetases class I (C) catalytic domain DESAF_RS12430 PF00690 Cation transporter/ATPase, N-terminus DESAF_RS12430 PF00689 Cation transporting ATPase, C-terminus DESAF_RS12445 PF02542 YgbB family DESAF_RS12445 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DESAF_RS12455 PF00106 short chain dehydrogenase DESAF_RS12465 PF01784 NIF3 (NGG1p interacting factor 3) DESAF_RS12475 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS12480 PF02592 Putative vitamin uptake transporter DESAF_RS12485 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS12490 PF13439 Glycosyltransferase Family 4 DESAF_RS12490 PF00534 Glycosyl transferases group 1 DESAF_RS12495 PF13439 Glycosyltransferase Family 4 DESAF_RS12495 PF00534 Glycosyl transferases group 1 DESAF_RS12500 PF01609 Transposase DDE domain DESAF_RS12510 PF00210 Ferritin-like domain DESAF_RS12525 PF01209 ubiE/COQ5 methyltransferase family DESAF_RS12535 PF01343 Peptidase family S49 DESAF_RS12540 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS12545 PF13426 PAS domain DESAF_RS12545 PF07228 Stage II sporulation protein E (SpoIIE) DESAF_RS12550 PF00072 Response regulator receiver domain DESAF_RS12550 PF02954 Bacterial regulatory protein, Fis family DESAF_RS12550 PF00158 Sigma-54 interaction domain DESAF_RS12575 PF00132 Bacterial transferase hexapeptide (six repeats) DESAF_RS12580 PF00180 Isocitrate/isopropylmalate dehydrogenase DESAF_RS12585 PF02423 Ornithine cyclodeaminase/mu-crystallin family DESAF_RS12590 PF04474 Protein of unknown function (DUF554) DESAF_RS12660 PF02743 Cache domain DESAF_RS12660 PF00672 HAMP domain DESAF_RS12660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS12740 PF01627 Hpt domain DESAF_RS12740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS12740 PF00672 HAMP domain DESAF_RS12740 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS12740 PF00072 Response regulator receiver domain DESAF_RS12740 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS12745 PF00717 Peptidase S24-like DESAF_RS12750 PF11799 impB/mucB/samB family C-terminal domain DESAF_RS12750 PF13438 Domain of unknown function (DUF4113) DESAF_RS12750 PF00817 impB/mucB/samB family DESAF_RS12770 PF01584 CheW-like domain DESAF_RS12785 PF02743 Cache domain DESAF_RS12785 PF00672 HAMP domain DESAF_RS12785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS12790 PF00403 Heavy-metal-associated domain DESAF_RS12800 PF00072 Response regulator receiver domain DESAF_RS12800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS12805 PF00196 Bacterial regulatory proteins, luxR family DESAF_RS12805 PF00072 Response regulator receiver domain DESAF_RS12830 PF01799 [2Fe-2S] binding domain DESAF_RS12830 PF00111 2Fe-2S iron-sulfur cluster binding domain DESAF_RS12835 PF00941 FAD binding domain in molybdopterin dehydrogenase DESAF_RS12835 PF03450 CO dehydrogenase flavoprotein C-terminal domain DESAF_RS12840 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DESAF_RS12840 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DESAF_RS12845 PF00583 Acetyltransferase (GNAT) family DESAF_RS12865 PF00860 Permease family DESAF_RS12870 PF00884 Sulfatase DESAF_RS12870 PF16385 Domain of unknown function DESAF_RS12875 PF13186 Iron-sulfur cluster-binding domain DESAF_RS12875 PF04055 Radical SAM superfamily DESAF_RS12900 PF13091 PLD-like domain DESAF_RS12905 PF01590 GAF domain DESAF_RS12905 PF02954 Bacterial regulatory protein, Fis family DESAF_RS12905 PF00158 Sigma-54 interaction domain DESAF_RS12930 PF01791 DeoC/LacD family aldolase DESAF_RS12935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DESAF_RS12940 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS12945 PF00005 ABC transporter DESAF_RS12945 PF00571 CBS domain DESAF_RS12955 PF00072 Response regulator receiver domain DESAF_RS12955 PF08448 PAS fold DESAF_RS12955 PF13188 PAS domain DESAF_RS12955 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS12970 PF00072 Response regulator receiver domain DESAF_RS12970 PF02954 Bacterial regulatory protein, Fis family DESAF_RS12970 PF00158 Sigma-54 interaction domain DESAF_RS12980 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS12980 PF00989 PAS fold DESAF_RS12980 PF00072 Response regulator receiver domain DESAF_RS12980 PF01627 Hpt domain DESAF_RS12980 PF18415 Histidine kinase receptor ArcB trans-membrane domain DESAF_RS12995 PF00672 HAMP domain DESAF_RS12995 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS12995 PF01627 Hpt domain DESAF_RS12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS12995 PF00072 Response regulator receiver domain DESAF_RS12995 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS13005 PF03591 AzlC protein DESAF_RS13010 PF00155 Aminotransferase class I and II DESAF_RS13010 PF00392 Bacterial regulatory proteins, gntR family DESAF_RS13015 PF08241 Methyltransferase domain DESAF_RS13045 PF00535 Glycosyl transferase family 2 DESAF_RS13060 PF00300 Histidine phosphatase superfamily (branch 1) DESAF_RS13070 PF00892 EamA-like transporter family DESAF_RS13100 PF00005 ABC transporter DESAF_RS13105 PF01061 ABC-2 type transporter DESAF_RS13110 PF00005 ABC transporter DESAF_RS13115 PF01022 Bacterial regulatory protein, arsR family DESAF_RS13145 PF01814 Hemerythrin HHE cation binding domain DESAF_RS13150 PF06397 Desulfoferrodoxin, N-terminal domain DESAF_RS13165 PF00005 ABC transporter DESAF_RS13170 PF02405 Permease MlaE DESAF_RS13175 PF05139 Erythromycin esterase DESAF_RS13175 PF00156 Phosphoribosyl transferase domain DESAF_RS13180 PF00781 Diacylglycerol kinase catalytic domain DESAF_RS13185 PF04343 Protein of unknown function, DUF488 DESAF_RS13190 PF00834 Ribulose-phosphate 3 epimerase family DESAF_RS13195 PF17805 AsnC-like ligand binding domain DESAF_RS13195 PF13404 AsnC-type helix-turn-helix domain DESAF_RS13200 PF04055 Radical SAM superfamily DESAF_RS13200 PF13186 Iron-sulfur cluster-binding domain DESAF_RS13205 PF00490 Delta-aminolevulinic acid dehydratase DESAF_RS13220 PF13186 Iron-sulfur cluster-binding domain DESAF_RS13220 PF04055 Radical SAM superfamily DESAF_RS13240 PF00795 Carbon-nitrogen hydrolase DESAF_RS13250 PF00862 Sucrose synthase DESAF_RS13250 PF00534 Glycosyl transferases group 1 DESAF_RS13260 PF07195 Flagellar hook-associated protein 2 C-terminus DESAF_RS13260 PF02465 Flagellar hook-associated protein 2 N-terminus DESAF_RS13265 PF00700 Bacterial flagellin C-terminal helical region DESAF_RS13265 PF00669 Bacterial flagellin N-terminal helical region DESAF_RS13270 PF00814 Glycoprotease family DESAF_RS13275 PF17820 PDZ domain DESAF_RS13275 PF02163 Peptidase family M50 DESAF_RS13280 PF13288 DXP reductoisomerase C-terminal domain DESAF_RS13280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DESAF_RS13280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DESAF_RS13290 PF00301 Rubredoxin DESAF_RS13310 PF03447 Homoserine dehydrogenase, NAD binding domain DESAF_RS13310 PF01842 ACT domain DESAF_RS13310 PF00742 Homoserine dehydrogenase DESAF_RS13315 PF00155 Aminotransferase class I and II DESAF_RS13320 PF00582 Universal stress protein family DESAF_RS13340 PF00873 AcrB/AcrD/AcrF family DESAF_RS13355 PF00436 Single-strand binding protein family DESAF_RS13360 PF03055 Retinal pigment epithelial membrane protein DESAF_RS13380 PF02780 Transketolase, C-terminal domain DESAF_RS13380 PF02779 Transketolase, pyrimidine binding domain DESAF_RS13385 PF00676 Dehydrogenase E1 component DESAF_RS13390 PF08525 Opacity-associated protein A N-terminal motif DESAF_RS13390 PF01551 Peptidase family M23 DESAF_RS13390 PF01476 LysM domain DESAF_RS13395 PF01171 PP-loop family DESAF_RS13405 PF01192 RNA polymerase Rpb6 DESAF_RS13410 PF01556 DnaJ C terminal domain DESAF_RS13410 PF00226 DnaJ domain DESAF_RS13410 PF00684 DnaJ central domain DESAF_RS13415 PF01967 MoaC family DESAF_RS13430 PF00156 Phosphoribosyl transferase domain DESAF_RS13440 PF00696 Amino acid kinase family DESAF_RS13445 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS13445 PF07724 AAA domain (Cdc48 subfamily) DESAF_RS13450 PF00227 Proteasome subunit DESAF_RS13455 PF05193 Peptidase M16 inactive domain DESAF_RS13455 PF00675 Insulinase (Peptidase family M16) DESAF_RS13460 PF01435 Peptidase family M48 DESAF_RS13460 PF07720 Tetratricopeptide repeat DESAF_RS13465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DESAF_RS13465 PF07497 Rho termination factor, RNA-binding domain DESAF_RS13465 PF07498 Rho termination factor, N-terminal domain DESAF_RS13475 PF01195 Peptidyl-tRNA hydrolase DESAF_RS13480 PF14693 Ribosomal protein TL5, C-terminal domain DESAF_RS13480 PF01386 Ribosomal L25p family DESAF_RS13485 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DESAF_RS13485 PF14572 Phosphoribosyl synthetase-associated domain DESAF_RS13500 PF13180 PDZ domain DESAF_RS13515 PF00701 Dihydrodipicolinate synthetase family DESAF_RS13525 PF00216 Bacterial DNA-binding protein DESAF_RS13530 PF10609 NUBPL iron-transfer P-loop NTPase DESAF_RS13545 PF00795 Carbon-nitrogen hydrolase DESAF_RS13550 PF00571 CBS domain DESAF_RS13550 PF03471 Transporter associated domain DESAF_RS13555 PF01134 Glucose inhibited division protein A DESAF_RS13555 PF13932 GidA associated domain DESAF_RS13560 PF01546 Peptidase family M20/M25/M40 DESAF_RS13560 PF07687 Peptidase dimerisation domain DESAF_RS13570 PF01979 Amidohydrolase family DESAF_RS13580 PF02386 Cation transport protein DESAF_RS13590 PF12706 Beta-lactamase superfamily domain DESAF_RS13595 PF00682 HMGL-like DESAF_RS13595 PF08502 LeuA allosteric (dimerisation) domain DESAF_RS13600 PF00696 Amino acid kinase family DESAF_RS13600 PF01842 ACT domain DESAF_RS13600 PF13840 ACT domain DESAF_RS13605 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DESAF_RS13610 PF01743 Poly A polymerase head domain DESAF_RS13610 PF00571 CBS domain DESAF_RS13615 PF01256 Carbohydrate kinase DESAF_RS13615 PF03853 YjeF-related protein N-terminus DESAF_RS13620 PF01648 4'-phosphopantetheinyl transferase superfamily DESAF_RS13625 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DESAF_RS13630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DESAF_RS13630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DESAF_RS13630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DESAF_RS13640 PF01584 CheW-like domain DESAF_RS13645 PF17757 UvrB interaction domain DESAF_RS13645 PF03461 TRCF domain DESAF_RS13645 PF00271 Helicase conserved C-terminal domain DESAF_RS13645 PF00270 DEAD/DEAH box helicase DESAF_RS13645 PF02559 CarD-like/TRCF domain DESAF_RS13655 PF00639 PPIC-type PPIASE domain DESAF_RS13655 PF09312 SurA N-terminal domain DESAF_RS13665 PF02565 Recombination protein O C terminal DESAF_RS13665 PF11967 Recombination protein O N terminal DESAF_RS13670 PF02091 Glycyl-tRNA synthetase alpha subunit DESAF_RS13675 PF02092 Glycyl-tRNA synthetase beta subunit DESAF_RS13680 PF01649 Ribosomal protein S20 DESAF_RS13700 PF00750 tRNA synthetases class I (R) DESAF_RS13700 PF05746 DALR anticodon binding domain DESAF_RS13700 PF03485 Arginyl tRNA synthetase N terminal domain DESAF_RS13705 PF00698 Acyl transferase domain DESAF_RS13710 PF02527 rRNA small subunit methyltransferase G DESAF_RS13720 PF02590 Predicted SPOUT methyltransferase DESAF_RS13730 PF00672 HAMP domain DESAF_RS13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS13730 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS13730 PF00989 PAS fold DESAF_RS13735 PF08338 Domain of unknown function (DUF1731) DESAF_RS13735 PF01370 NAD dependent epimerase/dehydratase family DESAF_RS13740 PF00072 Response regulator receiver domain DESAF_RS13745 PF02954 Bacterial regulatory protein, Fis family DESAF_RS13745 PF00158 Sigma-54 interaction domain DESAF_RS13745 PF00072 Response regulator receiver domain DESAF_RS13755 PF03372 Endonuclease/Exonuclease/phosphatase family DESAF_RS13765 PF01812 5-formyltetrahydrofolate cyclo-ligase family DESAF_RS13770 PF02578 Multi-copper polyphenol oxidoreductase laccase DESAF_RS13780 PF01609 Transposase DDE domain DESAF_RS13785 PF00152 tRNA synthetases class II (D, K and N) DESAF_RS13785 PF01336 OB-fold nucleic acid binding domain DESAF_RS13790 PF12704 MacB-like periplasmic core domain DESAF_RS13790 PF02687 FtsX-like permease family DESAF_RS13795 PF00005 ABC transporter DESAF_RS13800 PF01103 Surface antigen DESAF_RS13800 PF07244 Surface antigen variable number repeat DESAF_RS13810 PF00132 Bacterial transferase hexapeptide (six repeats) DESAF_RS13810 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DESAF_RS13815 PF07977 FabA-like domain DESAF_RS13820 PF00132 Bacterial transferase hexapeptide (six repeats) DESAF_RS13820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DESAF_RS13825 PF06230 LpxI C-terminal domain DESAF_RS13825 PF17930 LpxI N-terminal domain DESAF_RS13830 PF04468 PSP1 C-terminal conserved region DESAF_RS13835 PF01588 Putative tRNA binding domain DESAF_RS13835 PF00133 tRNA synthetases class I (I, L, M and V) DESAF_RS13835 PF09334 tRNA synthetases class I (M) DESAF_RS13855 PF01171 PP-loop family DESAF_RS13870 PF00211 Adenylate and Guanylate cyclase catalytic domain DESAF_RS13885 PF00005 ABC transporter DESAF_RS13905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DESAF_RS13905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DESAF_RS13965 PF13538 UvrD-like helicase C-terminal domain DESAF_RS13965 PF14490 Helix-hairpin-helix containing domain DESAF_RS13965 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DESAF_RS13970 PF02581 Thiamine monophosphate synthase DESAF_RS13970 PF08543 Phosphomethylpyrimidine kinase DESAF_RS13980 PF02743 Cache domain DESAF_RS13980 PF00672 HAMP domain DESAF_RS13980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS13985 PF05698 Bacterial trigger factor protein (TF) C-terminus DESAF_RS13985 PF05697 Bacterial trigger factor protein (TF) DESAF_RS13990 PF00574 Clp protease DESAF_RS13995 PF06689 ClpX C4-type zinc finger DESAF_RS13995 PF10431 C-terminal, D2-small domain, of ClpB protein DESAF_RS13995 PF07724 AAA domain (Cdc48 subfamily) DESAF_RS14000 PF02190 ATP-dependent protease La (LON) substrate-binding domain DESAF_RS14000 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS14000 PF05362 Lon protease (S16) C-terminal proteolytic domain DESAF_RS14005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DESAF_RS14010 PF02810 SEC-C motif DESAF_RS14020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DESAF_RS14020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DESAF_RS14030 PF00764 Arginosuccinate synthase DESAF_RS14035 PF00689 Cation transporting ATPase, C-terminus DESAF_RS14035 PF00690 Cation transporter/ATPase, N-terminus DESAF_RS14040 PF14698 Argininosuccinate lyase C-terminal DESAF_RS14040 PF00206 Lyase DESAF_RS14045 PF00575 S1 RNA binding domain DESAF_RS14050 PF14492 Elongation Factor G, domain II DESAF_RS14050 PF03764 Elongation factor G, domain IV DESAF_RS14050 PF00679 Elongation factor G C-terminus DESAF_RS14050 PF03144 Elongation factor Tu domain 2 DESAF_RS14050 PF00009 Elongation factor Tu GTP binding domain DESAF_RS14055 PF00583 Acetyltransferase (GNAT) family DESAF_RS14070 PF17770 Ribonuclease J C-terminal domain DESAF_RS14070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DESAF_RS14070 PF00753 Metallo-beta-lactamase superfamily DESAF_RS14105 PF00582 Universal stress protein family DESAF_RS14115 PF01042 Endoribonuclease L-PSP DESAF_RS14140 PF01966 HD domain DESAF_RS14140 PF11871 Domain of unknown function (DUF3391) DESAF_RS14150 PF01627 Hpt domain DESAF_RS14150 PF18415 Histidine kinase receptor ArcB trans-membrane domain DESAF_RS14150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS14150 PF00989 PAS fold DESAF_RS14150 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS14150 PF00072 Response regulator receiver domain DESAF_RS14160 PF03061 Thioesterase superfamily DESAF_RS14165 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DESAF_RS14165 PF01676 Metalloenzyme superfamily DESAF_RS14195 PF03449 Transcription elongation factor, N-terminal DESAF_RS14195 PF01272 Transcription elongation factor, GreA/GreB, C-term DESAF_RS14215 PF04193 PQ loop repeat DESAF_RS14225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DESAF_RS14230 PF03063 Prismane/CO dehydrogenase family DESAF_RS14235 PF13545 Crp-like helix-turn-helix domain DESAF_RS14235 PF00027 Cyclic nucleotide-binding domain DESAF_RS14240 PF01176 Translation initiation factor 1A / IF-1 DESAF_RS14245 PF01584 CheW-like domain DESAF_RS14250 PF03707 Bacterial signalling protein N terminal repeat DESAF_RS14250 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS14250 PF00563 EAL domain DESAF_RS14265 PF04536 TPM domain DESAF_RS14270 PF04011 LemA family DESAF_RS14280 PF02599 Global regulator protein family DESAF_RS14285 PF02623 FliW protein DESAF_RS14300 PF01513 ATP-NAD kinase DESAF_RS14305 PF03562 MltA specific insert domain DESAF_RS14305 PF06725 3D domain DESAF_RS14315 PF02934 GatB/GatE catalytic domain DESAF_RS14315 PF02637 GatB domain DESAF_RS14320 PF01008 Initiation factor 2 subunit family DESAF_RS14325 PF01926 50S ribosome-binding GTPase DESAF_RS14325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DESAF_RS14345 PF02633 Creatinine amidohydrolase DESAF_RS14350 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS14365 PF01791 DeoC/LacD family aldolase DESAF_RS14410 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DESAF_RS14410 PF00175 Oxidoreductase NAD-binding domain DESAF_RS14430 PF01593 Flavin containing amine oxidoreductase DESAF_RS14435 PF02754 Cysteine-rich domain DESAF_RS14445 PF00465 Iron-containing alcohol dehydrogenase DESAF_RS14450 PF02954 Bacterial regulatory protein, Fis family DESAF_RS14450 PF00158 Sigma-54 interaction domain DESAF_RS14450 PF00072 Response regulator receiver domain DESAF_RS14455 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS14455 PF00989 PAS fold DESAF_RS14460 PF00465 Iron-containing alcohol dehydrogenase DESAF_RS14465 PF12169 DNA polymerase III subunits gamma and tau domain III DESAF_RS14465 PF12170 DNA polymerase III tau subunit V interacting with alpha DESAF_RS14470 PF02575 YbaB/EbfC DNA-binding family DESAF_RS14475 PF13662 Toprim domain DESAF_RS14475 PF02132 RecR protein DESAF_RS14480 PF00196 Bacterial regulatory proteins, luxR family DESAF_RS14480 PF00072 Response regulator receiver domain DESAF_RS14495 PF02641 Uncharacterized ACR, COG1993 DESAF_RS14500 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DESAF_RS14510 PF02617 ATP-dependent Clp protease adaptor protein ClpS DESAF_RS14515 PF07724 AAA domain (Cdc48 subfamily) DESAF_RS14515 PF17871 AAA lid domain DESAF_RS14515 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS14515 PF02861 Clp amino terminal domain, pathogenicity island component DESAF_RS14515 PF10431 C-terminal, D2-small domain, of ClpB protein DESAF_RS14520 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DESAF_RS14535 PF17757 UvrB interaction domain DESAF_RS14535 PF00271 Helicase conserved C-terminal domain DESAF_RS14535 PF02151 UvrB/uvrC motif DESAF_RS14535 PF04851 Type III restriction enzyme, res subunit DESAF_RS14535 PF12344 Ultra-violet resistance protein B DESAF_RS14540 PF02080 TrkA-C domain DESAF_RS14545 PF12826 Helix-hairpin-helix motif DESAF_RS14545 PF00533 BRCA1 C Terminus (BRCT) domain DESAF_RS14545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DESAF_RS14545 PF03120 NAD-dependent DNA ligase OB-fold domain DESAF_RS14545 PF01653 NAD-dependent DNA ligase adenylation domain DESAF_RS14550 PF05173 Dihydrodipicolinate reductase, C-terminus DESAF_RS14550 PF01113 Dihydrodipicolinate reductase, N-terminus DESAF_RS14555 PF01113 Dihydrodipicolinate reductase, N-terminus DESAF_RS14555 PF05173 Dihydrodipicolinate reductase, C-terminus DESAF_RS14560 PF13193 AMP-binding enzyme C-terminal domain DESAF_RS14560 PF00501 AMP-binding enzyme DESAF_RS14570 PF00684 DnaJ central domain DESAF_RS14570 PF01556 DnaJ C terminal domain DESAF_RS14570 PF00226 DnaJ domain DESAF_RS14590 PF02683 Cytochrome C biogenesis protein transmembrane region DESAF_RS14590 PF11412 Disulphide bond corrector protein DsbC DESAF_RS14590 PF13098 Thioredoxin-like domain DESAF_RS14605 PF02910 Fumarate reductase flavoprotein C-term DESAF_RS14605 PF00890 FAD binding domain DESAF_RS14610 PF02445 Quinolinate synthetase A protein DESAF_RS14615 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DESAF_RS14615 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DESAF_RS14620 PF00571 CBS domain DESAF_RS14620 PF01769 Divalent cation transporter DESAF_RS14620 PF03448 MgtE intracellular N domain DESAF_RS14645 PF01790 Prolipoprotein diacylglyceryl transferase DESAF_RS14650 PF01252 Signal peptidase (SPase) II DESAF_RS14655 PF00133 tRNA synthetases class I (I, L, M and V) DESAF_RS14655 PF08264 Anticodon-binding domain of tRNA DESAF_RS14660 PF08676 MutL C terminal dimerisation domain DESAF_RS14660 PF01119 DNA mismatch repair protein, C-terminal domain DESAF_RS14665 PF04453 LPS transport system D DESAF_RS14665 PF03968 OstA-like protein DESAF_RS14670 PF01168 Alanine racemase, N-terminal domain DESAF_RS14670 PF00842 Alanine racemase, C-terminal domain DESAF_RS14680 PF01891 Cobalt uptake substrate-specific transmembrane region DESAF_RS14690 PF00534 Glycosyl transferases group 1 DESAF_RS14690 PF13439 Glycosyltransferase Family 4 DESAF_RS14700 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS14710 PF00005 ABC transporter DESAF_RS14710 PF03459 TOBE domain DESAF_RS14720 PF00730 HhH-GPD superfamily base excision DNA repair protein DESAF_RS14720 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DESAF_RS14725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DESAF_RS14725 PF12833 Helix-turn-helix domain DESAF_RS14725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DESAF_RS14725 PF02805 Metal binding domain of Ada DESAF_RS14750 PF02896 PEP-utilising enzyme, TIM barrel domain DESAF_RS14750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DESAF_RS14750 PF00391 PEP-utilising enzyme, mobile domain DESAF_RS14765 PF12996 DUF based on E. rectale Gene description (DUF3880) DESAF_RS14775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DESAF_RS14775 PF14824 Sirohaem biosynthesis protein central DESAF_RS14775 PF10414 Sirohaem synthase dimerisation region DESAF_RS14780 PF01578 Cytochrome C assembly protein DESAF_RS14785 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DESAF_RS14785 PF01488 Shikimate / quinate 5-dehydrogenase DESAF_RS14785 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DESAF_RS14795 PF01184 GPR1/FUN34/yaaH family DESAF_RS14805 PF13683 Integrase core domain DESAF_RS14805 PF13276 HTH-like domain DESAF_RS14825 PF01507 Phosphoadenosine phosphosulfate reductase family DESAF_RS14830 PF04551 GcpE protein DESAF_RS14835 PF03129 Anticodon binding domain DESAF_RS14835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DESAF_RS14835 PF04073 Aminoacyl-tRNA editing domain DESAF_RS14840 PF13742 OB-fold nucleic acid binding domain DESAF_RS14840 PF02601 Exonuclease VII, large subunit DESAF_RS14845 PF01551 Peptidase family M23 DESAF_RS14845 PF08525 Opacity-associated protein A N-terminal motif DESAF_RS14845 PF01476 LysM domain DESAF_RS14850 PF02609 Exonuclease VII small subunit DESAF_RS14855 PF00348 Polyprenyl synthetase DESAF_RS14860 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DESAF_RS14860 PF02779 Transketolase, pyrimidine binding domain DESAF_RS14860 PF02780 Transketolase, C-terminal domain DESAF_RS14865 PF00672 HAMP domain DESAF_RS14865 PF01966 HD domain DESAF_RS14870 PF14306 PUA-like domain DESAF_RS14870 PF01747 ATP-sulfurylase DESAF_RS14875 PF00128 Alpha amylase, catalytic domain DESAF_RS14875 PF11941 Domain of unknown function (DUF3459) DESAF_RS14880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DESAF_RS14880 PF02806 Alpha amylase, C-terminal all-beta domain DESAF_RS14880 PF00128 Alpha amylase, catalytic domain DESAF_RS14885 PF00128 Alpha amylase, catalytic domain DESAF_RS14885 PF16657 Maltogenic Amylase, C-terminal domain DESAF_RS14890 PF11896 Domain of unknown function (DUF3416) DESAF_RS14890 PF00128 Alpha amylase, catalytic domain DESAF_RS14895 PF02678 Pirin DESAF_RS14895 PF17954 Quercetinase C-terminal cupin domain DESAF_RS14920 PF01618 MotA/TolQ/ExbB proton channel family DESAF_RS14925 PF13677 Membrane MotB of proton-channel complex MotA/MotB DESAF_RS14925 PF00691 OmpA family DESAF_RS14930 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS14935 PF00005 ABC transporter DESAF_RS14935 PF00571 CBS domain DESAF_RS14940 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS14945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DESAF_RS14950 PF03975 CheD chemotactic sensory transduction DESAF_RS14955 PF11799 impB/mucB/samB family C-terminal domain DESAF_RS14955 PF00817 impB/mucB/samB family DESAF_RS14955 PF11798 IMS family HHH motif DESAF_RS14975 PF01066 CDP-alcohol phosphatidyltransferase DESAF_RS14980 PF02416 mttA/Hcf106 family DESAF_RS14995 PF13419 Haloacid dehalogenase-like hydrolase DESAF_RS15000 PF02325 YGGT family DESAF_RS15015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DESAF_RS15015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DESAF_RS15015 PF00205 Thiamine pyrophosphate enzyme, central domain DESAF_RS15020 PF10369 Small subunit of acetolactate synthase DESAF_RS15020 PF01842 ACT domain DESAF_RS15025 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DESAF_RS15025 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DESAF_RS15030 PF07690 Major Facilitator Superfamily DESAF_RS15045 PF02673 Bacitracin resistance protein BacA DESAF_RS15065 PF01926 50S ribosome-binding GTPase DESAF_RS15070 PF01220 Dehydroquinase class II DESAF_RS15075 PF08207 Elongation factor P (EF-P) KOW-like domain DESAF_RS15075 PF09285 Elongation factor P, C-terminal DESAF_RS15075 PF01132 Elongation factor P (EF-P) OB domain DESAF_RS15080 PF01580 FtsK/SpoIIIE family DESAF_RS15080 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DESAF_RS15080 PF17854 FtsK alpha domain DESAF_RS15080 PF09397 Ftsk gamma domain DESAF_RS15090 PF03548 Outer membrane lipoprotein carrier protein LolA DESAF_RS15095 PF01479 S4 domain DESAF_RS15095 PF00849 RNA pseudouridylate synthase DESAF_RS15105 PF00005 ABC transporter DESAF_RS15105 PF00664 ABC transporter transmembrane region DESAF_RS15115 PF03279 Bacterial lipid A biosynthesis acyltransferase DESAF_RS15155 PF02441 Flavoprotein DESAF_RS15160 PF12706 Beta-lactamase superfamily domain DESAF_RS15165 PF13340 Putative transposase of IS4/5 family (DUF4096) DESAF_RS15175 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DESAF_RS15180 PF00155 Aminotransferase class I and II DESAF_RS15185 PF02899 Phage integrase, N-terminal SAM-like domain DESAF_RS15185 PF00589 Phage integrase family DESAF_RS15190 PF01368 DHH family DESAF_RS15190 PF12627 Probable RNA and SrmB- binding site of polymerase A DESAF_RS15190 PF00571 CBS domain DESAF_RS15190 PF02272 DHHA1 domain DESAF_RS15190 PF01743 Poly A polymerase head domain DESAF_RS15210 PF18073 Rubredoxin metal binding domain DESAF_RS15215 PF00488 MutS domain V DESAF_RS15215 PF05188 MutS domain II DESAF_RS15215 PF01624 MutS domain I DESAF_RS15215 PF05190 MutS family domain IV DESAF_RS15215 PF05192 MutS domain III DESAF_RS15225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DESAF_RS15225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DESAF_RS15230 PF01339 CheB methylesterase DESAF_RS15230 PF00072 Response regulator receiver domain DESAF_RS15235 PF01739 CheR methyltransferase, SAM binding domain DESAF_RS15235 PF03705 CheR methyltransferase, all-alpha domain DESAF_RS15240 PF01627 Hpt domain DESAF_RS15240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS15240 PF01584 CheW-like domain DESAF_RS15240 PF02895 Signal transducing histidine kinase, homodimeric domain DESAF_RS15245 PF00072 Response regulator receiver domain DESAF_RS15270 PF03033 Glycosyltransferase family 28 N-terminal domain DESAF_RS15270 PF04101 Glycosyltransferase family 28 C-terminal domain DESAF_RS15275 PF00534 Glycosyl transferases group 1 DESAF_RS15275 PF13439 Glycosyltransferase Family 4 DESAF_RS15280 PF00534 Glycosyl transferases group 1 DESAF_RS15280 PF13439 Glycosyltransferase Family 4 DESAF_RS15290 PF03033 Glycosyltransferase family 28 N-terminal domain DESAF_RS15290 PF04101 Glycosyltransferase family 28 C-terminal domain DESAF_RS15300 PF12704 MacB-like periplasmic core domain DESAF_RS15300 PF02687 FtsX-like permease family DESAF_RS15305 PF00005 ABC transporter DESAF_RS15340 PF01493 GXGXG motif DESAF_RS15340 PF00310 Glutamine amidotransferases class-II DESAF_RS15340 PF01645 Conserved region in glutamate synthase DESAF_RS15340 PF04898 Glutamate synthase central domain DESAF_RS15360 PF07549 SecD/SecF GG Motif DESAF_RS15360 PF02355 Protein export membrane protein DESAF_RS15365 PF02355 Protein export membrane protein DESAF_RS15365 PF07549 SecD/SecF GG Motif DESAF_RS15370 PF02699 Preprotein translocase subunit DESAF_RS15380 PF00310 Glutamine amidotransferases class-II DESAF_RS15385 PF13806 Rieske-like [2Fe-2S] domain DESAF_RS15385 PF18267 Rubredoxin NAD+ reductase C-terminal domain DESAF_RS15385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS15385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DESAF_RS15385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DESAF_RS15385 PF04324 BFD-like [2Fe-2S] binding domain DESAF_RS15390 PF13247 4Fe-4S dicluster domain DESAF_RS15395 PF01645 Conserved region in glutamate synthase DESAF_RS15395 PF13187 4Fe-4S dicluster domain DESAF_RS15405 PF01336 OB-fold nucleic acid binding domain DESAF_RS15405 PF00152 tRNA synthetases class II (D, K and N) DESAF_RS15410 PF01842 ACT domain DESAF_RS15410 PF00551 Formyl transferase DESAF_RS15415 PF02881 SRP54-type protein, helical bundle domain DESAF_RS15415 PF00448 SRP54-type protein, GTPase domain DESAF_RS15435 PF03840 Preprotein translocase SecG subunit DESAF_RS15440 PF00121 Triosephosphate isomerase DESAF_RS15445 PF00162 Phosphoglycerate kinase DESAF_RS15450 PF00583 Acetyltransferase (GNAT) family DESAF_RS15455 PF00293 NUDIX domain DESAF_RS15460 PF00459 Inositol monophosphatase family DESAF_RS15480 PF01571 Aminomethyltransferase folate-binding domain DESAF_RS15480 PF08669 Glycine cleavage T-protein C-terminal barrel domain DESAF_RS15490 PF12002 MgsA AAA+ ATPase C terminal DESAF_RS15490 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS15490 PF16193 AAA C-terminal domain DESAF_RS15505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DESAF_RS15505 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DESAF_RS15515 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DESAF_RS15520 PF04546 Sigma-70, non-essential region DESAF_RS15520 PF04542 Sigma-70 region 2 DESAF_RS15520 PF04539 Sigma-70 region 3 DESAF_RS15520 PF04545 Sigma-70, region 4 DESAF_RS15520 PF03979 Sigma-70 factor, region 1.1 DESAF_RS15520 PF00140 Sigma-70 factor, region 1.2 DESAF_RS15525 PF01807 CHC2 zinc finger DESAF_RS15525 PF10410 DnaB-helicase binding domain of primase DESAF_RS15525 PF08275 DNA primase catalytic core, N-terminal domain DESAF_RS15530 PF01713 Smr domain DESAF_RS15530 PF00488 MutS domain V DESAF_RS15540 PF01165 Ribosomal protein S21 DESAF_RS15545 PF00216 Bacterial DNA-binding protein DESAF_RS15550 PF00398 Ribosomal RNA adenine dimethylase DESAF_RS15555 PF00982 Glycosyltransferase family 20 DESAF_RS15565 PF03144 Elongation factor Tu domain 2 DESAF_RS15565 PF00009 Elongation factor Tu GTP binding domain DESAF_RS15565 PF03764 Elongation factor G, domain IV DESAF_RS15565 PF14492 Elongation Factor G, domain II DESAF_RS15565 PF00679 Elongation factor G C-terminus DESAF_RS15575 PF13525 Outer membrane lipoprotein DESAF_RS15580 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS15585 PF00085 Thioredoxin DESAF_RS15590 PF00814 Glycoprotease family DESAF_RS15595 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DESAF_RS15620 PF01066 CDP-alcohol phosphatidyltransferase DESAF_RS15625 PF01883 Iron-sulfur cluster assembly protein DESAF_RS15625 PF10609 NUBPL iron-transfer P-loop NTPase DESAF_RS15635 PF00571 CBS domain DESAF_RS15635 PF01743 Poly A polymerase head domain DESAF_RS15640 PF01455 HupF/HypC family DESAF_RS15645 PF01750 Hydrogenase maturation protease DESAF_RS15650 PF00374 Nickel-dependent hydrogenase DESAF_RS15655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DESAF_RS15655 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DESAF_RS15660 PF01750 Hydrogenase maturation protease DESAF_RS15670 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DESAF_RS15670 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DESAF_RS15680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DESAF_RS15680 PF00391 PEP-utilising enzyme, mobile domain DESAF_RS15680 PF02896 PEP-utilising enzyme, TIM barrel domain DESAF_RS15685 PF02785 Biotin carboxylase C-terminal domain DESAF_RS15685 PF00289 Biotin carboxylase, N-terminal domain DESAF_RS15685 PF00364 Biotin-requiring enzyme DESAF_RS15685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DESAF_RS15685 PF00682 HMGL-like DESAF_RS15685 PF02436 Conserved carboxylase domain DESAF_RS15690 PF02237 Biotin protein ligase C terminal domain DESAF_RS15690 PF03099 Biotin/lipoate A/B protein ligase family DESAF_RS15695 PF01966 HD domain DESAF_RS15695 PF01743 Poly A polymerase head domain DESAF_RS15695 PF12627 Probable RNA and SrmB- binding site of polymerase A DESAF_RS15700 PF01979 Amidohydrolase family DESAF_RS15715 PF01467 Cytidylyltransferase-like DESAF_RS15725 PF00753 Metallo-beta-lactamase superfamily DESAF_RS15725 PF10996 Beta-Casp domain DESAF_RS15725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DESAF_RS15730 PF02151 UvrB/uvrC motif DESAF_RS15730 PF08459 UvrC Helix-hairpin-helix N-terminal DESAF_RS15730 PF01541 GIY-YIG catalytic domain DESAF_RS15745 PF00589 Phage integrase family DESAF_RS15745 PF02899 Phage integrase, N-terminal SAM-like domain DESAF_RS15750 PF00990 Diguanylate cyclase, GGDEF domain DESAF_RS15750 PF17151 Periplasmic sensor domain DESAF_RS15765 PF17782 DprA winged helix domain DESAF_RS15765 PF02481 DNA recombination-mediator protein A DESAF_RS15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS15785 PF01627 Hpt domain DESAF_RS15785 PF01584 CheW-like domain DESAF_RS15785 PF02895 Signal transducing histidine kinase, homodimeric domain DESAF_RS15785 PF07194 P2 response regulator binding domain DESAF_RS15790 PF00072 Response regulator receiver domain DESAF_RS15795 PF01584 CheW-like domain DESAF_RS15800 PF13614 AAA domain DESAF_RS15810 PF01739 CheR methyltransferase, SAM binding domain DESAF_RS15810 PF03705 CheR methyltransferase, all-alpha domain DESAF_RS15820 PF00072 Response regulator receiver domain DESAF_RS15820 PF01339 CheB methylesterase DESAF_RS15825 PF00270 DEAD/DEAH box helicase DESAF_RS15825 PF00271 Helicase conserved C-terminal domain DESAF_RS15830 PF02833 DHHA2 domain DESAF_RS15830 PF01368 DHH family DESAF_RS15840 PF03830 PTS system sorbose subfamily IIB component DESAF_RS15850 PF03668 P-loop ATPase protein family DESAF_RS15855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DESAF_RS15860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DESAF_RS15860 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DESAF_RS15865 PF04963 Sigma-54 factor, core binding domain DESAF_RS15865 PF00309 Sigma-54 factor, Activator interacting domain (AID) DESAF_RS15865 PF04552 Sigma-54, DNA binding domain DESAF_RS15870 PF00005 ABC transporter DESAF_RS15890 PF06418 CTP synthase N-terminus DESAF_RS15890 PF00117 Glutamine amidotransferase class-I DESAF_RS15895 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DESAF_RS15895 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DESAF_RS15895 PF02769 AIR synthase related protein, C-terminal domain DESAF_RS15900 PF14437 MafB19-like deaminase DESAF_RS15935 PF02954 Bacterial regulatory protein, Fis family DESAF_RS15935 PF00072 Response regulator receiver domain DESAF_RS15935 PF00158 Sigma-54 interaction domain DESAF_RS15945 PF08448 PAS fold DESAF_RS15945 PF00672 HAMP domain DESAF_RS15945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS15945 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB DESAF_RS15945 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS15950 PF00072 Response regulator receiver domain DESAF_RS15950 PF00158 Sigma-54 interaction domain DESAF_RS15950 PF02954 Bacterial regulatory protein, Fis family DESAF_RS15955 PF02080 TrkA-C domain DESAF_RS15955 PF02254 TrkA-N domain DESAF_RS15960 PF02080 TrkA-C domain DESAF_RS15960 PF02254 TrkA-N domain DESAF_RS15965 PF02386 Cation transport protein DESAF_RS15970 PF01594 AI-2E family transporter DESAF_RS15980 PF00849 RNA pseudouridylate synthase DESAF_RS15995 PF00892 EamA-like transporter family DESAF_RS16000 PF13361 UvrD-like helicase C-terminal domain DESAF_RS16000 PF12705 PD-(D/E)XK nuclease superfamily DESAF_RS16000 PF00580 UvrD/REP helicase N-terminal domain DESAF_RS16015 PF00815 Histidinol dehydrogenase DESAF_RS16020 PF01259 SAICAR synthetase DESAF_RS16030 PF01250 Ribosomal protein S6 DESAF_RS16035 PF01084 Ribosomal protein S18 DESAF_RS16040 PF03948 Ribosomal protein L9, C-terminal domain DESAF_RS16040 PF01281 Ribosomal protein L9, N-terminal domain DESAF_RS16045 PF03796 DnaB-like helicase C terminal domain DESAF_RS16045 PF00772 DnaB-like helicase N terminal domain DESAF_RS16050 PF00501 AMP-binding enzyme DESAF_RS16050 PF14535 AMP-binding enzyme C-terminal domain DESAF_RS16060 PF00291 Pyridoxal-phosphate dependent enzyme DESAF_RS16065 PF01479 S4 domain DESAF_RS16065 PF01728 FtsJ-like methyltransferase DESAF_RS16075 PF00258 Flavodoxin DESAF_RS16075 PF00753 Metallo-beta-lactamase superfamily DESAF_RS16075 PF00301 Rubredoxin DESAF_RS16085 PF01791 DeoC/LacD family aldolase DESAF_RS16090 PF02535 ZIP Zinc transporter DESAF_RS16095 PF05532 CsbD-like DESAF_RS16120 PF01458 Uncharacterized protein family (UPF0051) DESAF_RS16125 PF00005 ABC transporter DESAF_RS16135 PF00849 RNA pseudouridylate synthase DESAF_RS16135 PF01479 S4 domain DESAF_RS16145 PF00860 Permease family DESAF_RS16150 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DESAF_RS16150 PF03641 Possible lysine decarboxylase DESAF_RS16150 PF11892 Domain of unknown function (DUF3412) DESAF_RS16160 PF00977 Histidine biosynthesis protein DESAF_RS16170 PF00475 Imidazoleglycerol-phosphate dehydratase DESAF_RS16175 PF00902 Sec-independent protein translocase protein (TatC) DESAF_RS16180 PF02416 mttA/Hcf106 family DESAF_RS16185 PF00117 Glutamine amidotransferase class-I DESAF_RS16185 PF00958 GMP synthase C terminal domain DESAF_RS16185 PF02540 NAD synthase DESAF_RS16190 PF00478 IMP dehydrogenase / GMP reductase domain DESAF_RS16190 PF00571 CBS domain DESAF_RS16195 PF12399 Branched-chain amino acid ATP-binding cassette transporter DESAF_RS16195 PF00005 ABC transporter DESAF_RS16200 PF00005 ABC transporter DESAF_RS16205 PF00005 ABC transporter DESAF_RS16205 PF12399 Branched-chain amino acid ATP-binding cassette transporter DESAF_RS16210 PF11862 Domain of unknown function (DUF3382) DESAF_RS16210 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS16215 PF02653 Branched-chain amino acid transport system / permease component DESAF_RS16220 PF13458 Periplasmic binding protein DESAF_RS16230 PF01578 Cytochrome C assembly protein DESAF_RS16240 PF00005 ABC transporter DESAF_RS16245 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DESAF_RS16245 PF01578 Cytochrome C assembly protein DESAF_RS16250 PF03100 CcmE DESAF_RS16255 PF00571 CBS domain DESAF_RS16255 PF01595 Cyclin M transmembrane N-terminal domain DESAF_RS16275 PF05050 Methyltransferase FkbM domain DESAF_RS16285 PF00180 Isocitrate/isopropylmalate dehydrogenase DESAF_RS16290 PF00694 Aconitase C-terminal domain DESAF_RS16295 PF00330 Aconitase family (aconitate hydratase) DESAF_RS16300 PF08502 LeuA allosteric (dimerisation) domain DESAF_RS16300 PF00682 HMGL-like DESAF_RS16305 PF01066 CDP-alcohol phosphatidyltransferase DESAF_RS16310 PF02666 Phosphatidylserine decarboxylase DESAF_RS16320 PF00989 PAS fold DESAF_RS16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS16320 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS16330 PF00248 Aldo/keto reductase family DESAF_RS16335 PF06180 Cobalt chelatase (CbiK) DESAF_RS16340 PF00248 Aldo/keto reductase family DESAF_RS16345 PF12801 4Fe-4S binding domain DESAF_RS16350 PF04015 Domain of unknown function (DUF362) DESAF_RS16385 PF00005 ABC transporter DESAF_RS16390 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DESAF_RS16390 PF18074 Primosomal protein N C-terminal domain DESAF_RS16390 PF00271 Helicase conserved C-terminal domain DESAF_RS16390 PF04851 Type III restriction enzyme, res subunit DESAF_RS16390 PF17764 3′ DNA-binding domain (3′BD) DESAF_RS16395 PF00483 Nucleotidyl transferase DESAF_RS16400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DESAF_RS16400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DESAF_RS16400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DESAF_RS16400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DESAF_RS16410 PF02457 DisA bacterial checkpoint controller nucleotide-binding DESAF_RS16415 PF00809 Pterin binding enzyme DESAF_RS16420 PF01434 Peptidase family M41 DESAF_RS16420 PF06480 FtsH Extracellular DESAF_RS16420 PF17862 AAA+ lid domain DESAF_RS16420 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS16430 PF01184 GPR1/FUN34/yaaH family DESAF_RS16445 PF03116 NQR2, RnfD, RnfE family DESAF_RS16455 PF02508 Rnf-Nqr subunit, membrane protein DESAF_RS16460 PF02508 Rnf-Nqr subunit, membrane protein DESAF_RS16465 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS16465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DESAF_RS16465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DESAF_RS16470 PF02424 ApbE family DESAF_RS16485 PF00005 ABC transporter DESAF_RS16495 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DESAF_RS16500 PF02492 CobW/HypB/UreG, nucleotide-binding domain DESAF_RS16525 PF00672 HAMP domain DESAF_RS16525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS16525 PF13426 PAS domain DESAF_RS16535 PF01883 Iron-sulfur cluster assembly protein DESAF_RS16535 PF10609 NUBPL iron-transfer P-loop NTPase DESAF_RS16545 PF13426 PAS domain DESAF_RS16545 PF00672 HAMP domain DESAF_RS16545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS16555 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DESAF_RS16555 PF01676 Metalloenzyme superfamily DESAF_RS16565 PF14535 AMP-binding enzyme C-terminal domain DESAF_RS16565 PF00501 AMP-binding enzyme DESAF_RS16575 PF01139 tRNA-splicing ligase RtcB DESAF_RS16580 PF09308 LuxQ, periplasmic DESAF_RS16580 PF00072 Response regulator receiver domain DESAF_RS16580 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS16585 PF02581 Thiamine monophosphate synthase DESAF_RS16595 PF04751 Protein of unknown function (DUF615) DESAF_RS16610 PF01880 Desulfoferrodoxin DESAF_RS16640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DESAF_RS16640 PF00205 Thiamine pyrophosphate enzyme, central domain DESAF_RS16640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DESAF_RS16670 PF02954 Bacterial regulatory protein, Fis family DESAF_RS16670 PF00072 Response regulator receiver domain DESAF_RS16670 PF00158 Sigma-54 interaction domain DESAF_RS16685 PF00158 Sigma-54 interaction domain DESAF_RS16685 PF00072 Response regulator receiver domain DESAF_RS16685 PF02954 Bacterial regulatory protein, Fis family DESAF_RS16690 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DESAF_RS16690 PF00391 PEP-utilising enzyme, mobile domain DESAF_RS16695 PF01894 Uncharacterised protein family UPF0047 DESAF_RS16700 PF04341 Protein of unknown function, DUF485 DESAF_RS16705 PF00474 Sodium:solute symporter family DESAF_RS16725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS16725 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS16735 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS16735 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS16735 PF00989 PAS fold DESAF_RS16735 PF00072 Response regulator receiver domain DESAF_RS16735 PF01627 Hpt domain DESAF_RS16745 PF02954 Bacterial regulatory protein, Fis family DESAF_RS16745 PF00072 Response regulator receiver domain DESAF_RS16745 PF00158 Sigma-54 interaction domain DESAF_RS16750 PF00989 PAS fold DESAF_RS16750 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS16770 PF03466 LysR substrate binding domain DESAF_RS16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DESAF_RS16780 PF01914 MarC family integral membrane protein DESAF_RS16800 PF00487 Fatty acid desaturase DESAF_RS16810 PF01588 Putative tRNA binding domain DESAF_RS16835 PF01584 CheW-like domain DESAF_RS16840 PF04286 Protein of unknown function (DUF445) DESAF_RS16845 PF00216 Bacterial DNA-binding protein DESAF_RS16855 PF00005 ABC transporter DESAF_RS16860 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS16865 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS16870 PF00710 Asparaginase, N-terminal DESAF_RS16870 PF17763 Glutaminase/Asparaginase C-terminal domain DESAF_RS16890 PF02618 YceG-like family DESAF_RS16895 PF03652 Holliday junction resolvase DESAF_RS16905 PF00549 CoA-ligase DESAF_RS16905 PF02629 CoA binding domain DESAF_RS16910 PF03315 Serine dehydratase beta chain DESAF_RS16910 PF03313 Serine dehydratase alpha chain DESAF_RS16915 PF00891 O-methyltransferase domain DESAF_RS16915 PF16864 Dimerisation domain DESAF_RS16930 PF07859 alpha/beta hydrolase fold DESAF_RS16935 PF04055 Radical SAM superfamily DESAF_RS16935 PF02579 Dinitrogenase iron-molybdenum cofactor DESAF_RS16950 PF01171 PP-loop family DESAF_RS16965 PF00072 Response regulator receiver domain DESAF_RS16970 PF02163 Peptidase family M50 DESAF_RS16975 PF00579 tRNA synthetases class I (W and Y) DESAF_RS16990 PF11941 Domain of unknown function (DUF3459) DESAF_RS16990 PF00128 Alpha amylase, catalytic domain DESAF_RS17000 PF00128 Alpha amylase, catalytic domain DESAF_RS17005 PF14602 Hexapeptide repeat of succinyl-transferase DESAF_RS17005 PF12464 Maltose acetyltransferase DESAF_RS17010 PF12464 Maltose acetyltransferase DESAF_RS17010 PF14602 Hexapeptide repeat of succinyl-transferase DESAF_RS17015 PF01627 Hpt domain DESAF_RS17015 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS17015 PF00672 HAMP domain DESAF_RS17015 PF00072 Response regulator receiver domain DESAF_RS17015 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS17020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DESAF_RS17040 PF00919 Uncharacterized protein family UPF0004 DESAF_RS17040 PF18693 TRAM domain DESAF_RS17040 PF04055 Radical SAM superfamily DESAF_RS17045 PF12327 FtsZ family, C-terminal domain DESAF_RS17045 PF00091 Tubulin/FtsZ family, GTPase domain DESAF_RS17050 PF02491 SHS2 domain inserted in FTSA DESAF_RS17055 PF08478 POTRA domain, FtsQ-type DESAF_RS17060 PF01565 FAD binding domain DESAF_RS17060 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DESAF_RS17065 PF01225 Mur ligase family, catalytic domain DESAF_RS17065 PF02875 Mur ligase family, glutamate ligase domain DESAF_RS17065 PF08245 Mur ligase middle domain DESAF_RS17070 PF03033 Glycosyltransferase family 28 N-terminal domain DESAF_RS17070 PF04101 Glycosyltransferase family 28 C-terminal domain DESAF_RS17075 PF01098 Cell cycle protein DESAF_RS17080 PF02875 Mur ligase family, glutamate ligase domain DESAF_RS17080 PF08245 Mur ligase middle domain DESAF_RS17085 PF00953 Glycosyl transferase family 4 DESAF_RS17085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DESAF_RS17090 PF01225 Mur ligase family, catalytic domain DESAF_RS17090 PF02875 Mur ligase family, glutamate ligase domain DESAF_RS17090 PF08245 Mur ligase middle domain DESAF_RS17095 PF02875 Mur ligase family, glutamate ligase domain DESAF_RS17095 PF08245 Mur ligase middle domain DESAF_RS17095 PF01225 Mur ligase family, catalytic domain DESAF_RS17100 PF03717 Penicillin-binding Protein dimerisation domain DESAF_RS17100 PF00905 Penicillin binding protein transpeptidase domain DESAF_RS17110 PF01795 MraW methylase family DESAF_RS17115 PF02381 MraZ protein, putative antitoxin-like DESAF_RS17125 PF11871 Domain of unknown function (DUF3391) DESAF_RS17125 PF01966 HD domain DESAF_RS17140 PF00572 Ribosomal protein L13 DESAF_RS17145 PF00380 Ribosomal protein S9/S16 DESAF_RS17160 PF00586 AIR synthase related protein, N-terminal domain DESAF_RS17160 PF02769 AIR synthase related protein, C-terminal domain DESAF_RS17270 PF02384 N-6 DNA Methylase DESAF_RS17285 PF11867 Domain of unknown function (DUF3387) DESAF_RS17285 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DESAF_RS17285 PF18766 SWI2/SNF2 ATPase DESAF_RS17290 PF14338 Mrr N-terminal domain DESAF_RS17290 PF04471 Restriction endonuclease DESAF_RS17295 PF06250 YhcG PDDEXK nuclease domain DESAF_RS17295 PF17761 DUF1016 N-terminal domain DESAF_RS17300 PF04471 Restriction endonuclease DESAF_RS17300 PF14338 Mrr N-terminal domain DESAF_RS17315 PF13195 Protein of unknown function (DUF4011) DESAF_RS17315 PF13086 AAA domain DESAF_RS17315 PF13087 AAA domain DESAF_RS17315 PF13195 Protein of unknown function (DUF4011) DESAF_RS17315 PF13086 AAA domain DESAF_RS17315 PF13087 AAA domain DESAF_RS17340 PF01734 Patatin-like phospholipase DESAF_RS17350 PF13505 Outer membrane protein beta-barrel domain DESAF_RS17355 PF01810 LysE type translocator DESAF_RS17365 PF01381 Helix-turn-helix DESAF_RS17370 PF01402 Ribbon-helix-helix protein, copG family DESAF_RS17380 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS17395 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DESAF_RS17400 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DESAF_RS17400 PF00293 NUDIX domain DESAF_RS17400 PF09297 NADH pyrophosphatase zinc ribbon domain DESAF_RS17420 PF00141 Peroxidase DESAF_RS17425 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS17425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS17425 PF00072 Response regulator receiver domain DESAF_RS17425 PF00672 HAMP domain DESAF_RS17425 PF01627 Hpt domain DESAF_RS17425 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS17430 PF00072 Response regulator receiver domain DESAF_RS17450 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DESAF_RS17655 PF00672 HAMP domain DESAF_RS17655 PF17202 Single cache domain 3 DESAF_RS17655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS17660 PF00565 Staphylococcal nuclease homologue DESAF_RS17670 PF09856 Predicted transcriptional regulator (DUF2083) DESAF_RS17670 PF01381 Helix-turn-helix DESAF_RS17670 PF06114 IrrE N-terminal-like domain DESAF_RS17710 PF17149 Periplasmic sensor domain found in signal transduction proteins DESAF_RS17710 PF00072 Response regulator receiver domain DESAF_RS17710 PF01627 Hpt domain DESAF_RS17710 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS17710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS17710 PF00672 HAMP domain DESAF_RS17770 PF08281 Sigma-70, region 4 DESAF_RS17770 PF04542 Sigma-70 region 2 DESAF_RS17780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DESAF_RS17780 PF00384 Molybdopterin oxidoreductase DESAF_RS17780 PF01568 Molydopterin dinucleotide binding domain DESAF_RS17785 PF13247 4Fe-4S dicluster domain DESAF_RS17905 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS17905 PF01434 Peptidase family M41 DESAF_RS17905 PF17862 AAA+ lid domain DESAF_RS17950 PF00072 Response regulator receiver domain DESAF_RS17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS17950 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS17950 PF01627 Hpt domain DESAF_RS17950 PF00989 PAS fold DESAF_RS17950 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS17980 PF00581 Rhodanese-like domain DESAF_RS17990 PF13426 PAS domain DESAF_RS17990 PF07568 Histidine kinase DESAF_RS17990 PF13581 Histidine kinase-like ATPase domain DESAF_RS17995 PF03144 Elongation factor Tu domain 2 DESAF_RS17995 PF00679 Elongation factor G C-terminus DESAF_RS17995 PF14492 Elongation Factor G, domain II DESAF_RS17995 PF00009 Elongation factor Tu GTP binding domain DESAF_RS18000 PF07690 Major Facilitator Superfamily DESAF_RS18005 PF10431 C-terminal, D2-small domain, of ClpB protein DESAF_RS18005 PF02861 Clp amino terminal domain, pathogenicity island component DESAF_RS18005 PF07724 AAA domain (Cdc48 subfamily) DESAF_RS18005 PF17871 AAA lid domain DESAF_RS18005 PF00004 ATPase family associated with various cellular activities (AAA) DESAF_RS18010 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DESAF_RS18015 PF02641 Uncharacterized ACR, COG1993 DESAF_RS18020 PF03952 Enolase, N-terminal domain DESAF_RS18020 PF00113 Enolase, C-terminal TIM barrel domain DESAF_RS18035 PF07995 Glucose / Sorbosone dehydrogenase DESAF_RS18045 PF01161 Phosphatidylethanolamine-binding protein DESAF_RS18060 PF01609 Transposase DDE domain DESAF_RS18065 PF02554 Carbon starvation protein CstA DESAF_RS18070 PF06580 Histidine kinase DESAF_RS18070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS18070 PF07694 5TMR of 5TMR-LYT DESAF_RS18070 PF13492 GAF domain DESAF_RS18075 PF00072 Response regulator receiver domain DESAF_RS18075 PF04397 LytTr DNA-binding domain DESAF_RS18080 PF12706 Beta-lactamase superfamily domain DESAF_RS18085 PF00672 HAMP domain DESAF_RS18085 PF02743 Cache domain DESAF_RS18085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS18090 PF01584 CheW-like domain DESAF_RS18105 PF01177 Asp/Glu/Hydantoin racemase DESAF_RS18125 PF17932 Tetracyclin repressor-like, C-terminal domain DESAF_RS18125 PF00440 Bacterial regulatory proteins, tetR family DESAF_RS18130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DESAF_RS18135 PF00873 AcrB/AcrD/AcrF family DESAF_RS18145 PF13426 PAS domain DESAF_RS18145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS18145 PF00672 HAMP domain DESAF_RS18150 PF00892 EamA-like transporter family DESAF_RS18175 PF03334 Na+/H+ antiporter subunit DESAF_RS18190 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DESAF_RS18195 PF00361 Proton-conducting membrane transporter DESAF_RS18200 PF00361 Proton-conducting membrane transporter DESAF_RS18210 PF13244 Domain of unknown function (DUF4040) DESAF_RS18210 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DESAF_RS18210 PF00361 Proton-conducting membrane transporter DESAF_RS18210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DESAF_RS18220 PF00270 DEAD/DEAH box helicase DESAF_RS18220 PF00271 Helicase conserved C-terminal domain DESAF_RS18245 PF01638 HxlR-like helix-turn-helix DESAF_RS18260 PF01613 Flavin reductase like domain DESAF_RS18265 PF12724 Flavodoxin domain DESAF_RS18280 PF06725 3D domain DESAF_RS18280 PF03562 MltA specific insert domain DESAF_RS18285 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS18290 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS18295 PF00005 ABC transporter DESAF_RS18300 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS18305 PF02913 FAD linked oxidases, C-terminal domain DESAF_RS18305 PF01565 FAD binding domain DESAF_RS18310 PF00155 Aminotransferase class I and II DESAF_RS18335 PF00109 Beta-ketoacyl synthase, N-terminal domain DESAF_RS18335 PF02801 Beta-ketoacyl synthase, C-terminal domain DESAF_RS18345 PF00109 Beta-ketoacyl synthase, N-terminal domain DESAF_RS18345 PF02801 Beta-ketoacyl synthase, C-terminal domain DESAF_RS18350 PF00550 Phosphopantetheine attachment site DESAF_RS18365 PF13186 Iron-sulfur cluster-binding domain DESAF_RS18365 PF04055 Radical SAM superfamily DESAF_RS18370 PF07977 FabA-like domain DESAF_RS18390 PF07977 FabA-like domain DESAF_RS18400 PF02801 Beta-ketoacyl synthase, C-terminal domain DESAF_RS18400 PF00109 Beta-ketoacyl synthase, N-terminal domain DESAF_RS18420 PF02310 B12 binding domain DESAF_RS18420 PF04055 Radical SAM superfamily DESAF_RS18425 PF00535 Glycosyl transferase family 2 DESAF_RS18435 PF00550 Phosphopantetheine attachment site DESAF_RS18440 PF02801 Beta-ketoacyl synthase, C-terminal domain DESAF_RS18440 PF00109 Beta-ketoacyl synthase, N-terminal domain DESAF_RS18455 PF00224 Pyruvate kinase, barrel domain DESAF_RS18455 PF02887 Pyruvate kinase, alpha/beta domain DESAF_RS18475 PF01103 Surface antigen DESAF_RS18475 PF17243 POTRA domain TamA domain 1 DESAF_RS18485 PF10609 NUBPL iron-transfer P-loop NTPase DESAF_RS18490 PF01740 STAS domain DESAF_RS18510 PF00664 ABC transporter transmembrane region DESAF_RS18510 PF00005 ABC transporter DESAF_RS18510 PF00664 ABC transporter transmembrane region DESAF_RS18510 PF00005 ABC transporter DESAF_RS18515 PF03916 Polysulphide reductase, NrfD DESAF_RS18520 PF00037 4Fe-4S binding domain DESAF_RS18520 PF13247 4Fe-4S dicluster domain DESAF_RS18525 PF00384 Molybdopterin oxidoreductase DESAF_RS18525 PF01568 Molydopterin dinucleotide binding domain DESAF_RS18530 PF02085 Class III cytochrome C family DESAF_RS18580 PF00733 Asparagine synthase DESAF_RS18580 PF13537 Glutamine amidotransferase domain DESAF_RS18595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DESAF_RS18600 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DESAF_RS18600 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DESAF_RS18600 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DESAF_RS18610 PF00005 ABC transporter DESAF_RS18615 PF00497 Bacterial extracellular solute-binding proteins, family 3 DESAF_RS18620 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS18625 PF00528 Binding-protein-dependent transport system inner membrane component DESAF_RS18630 PF01791 DeoC/LacD family aldolase DESAF_RS18635 PF02570 Precorrin-8X methylmutase DESAF_RS18645 PF01609 Transposase DDE domain DESAF_RS18655 PF00403 Heavy-metal-associated domain DESAF_RS18660 PF02371 Transposase IS116/IS110/IS902 family DESAF_RS18660 PF01548 Transposase DESAF_RS18665 PF01047 MarR family DESAF_RS18695 PF07196 Flagellin hook IN motif DESAF_RS18695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DESAF_RS18705 PF01551 Peptidase family M23 DESAF_RS18710 PF02119 Flagellar P-ring protein DESAF_RS18715 PF02107 Flagellar L-ring protein DESAF_RS18720 PF13144 Chaperone for flagella basal body P-ring formation DESAF_RS18725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DESAF_RS18725 PF00460 Flagella basal body rod protein DESAF_RS18730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DESAF_RS18730 PF00460 Flagella basal body rod protein DESAF_RS18740 PF02576 RimP N-terminal domain DESAF_RS18740 PF17384 RimP C-terminal SH3 domain DESAF_RS18745 PF00575 S1 RNA binding domain DESAF_RS18745 PF08529 NusA N-terminal domain DESAF_RS18745 PF13184 NusA-like KH domain DESAF_RS18750 PF00009 Elongation factor Tu GTP binding domain DESAF_RS18750 PF11987 Translation-initiation factor 2 DESAF_RS18750 PF04760 Translation initiation factor IF-2, N-terminal region DESAF_RS18750 PF00009 Elongation factor Tu GTP binding domain DESAF_RS18750 PF04760 Translation initiation factor IF-2, N-terminal region DESAF_RS18750 PF11987 Translation-initiation factor 2 DESAF_RS18760 PF02033 Ribosome-binding factor A DESAF_RS18770 PF16198 tRNA pseudouridylate synthase B C-terminal domain DESAF_RS18770 PF01509 TruB family pseudouridylate synthase (N terminal domain) DESAF_RS18775 PF00312 Ribosomal protein S15 DESAF_RS18780 PF03725 3' exoribonuclease family, domain 2 DESAF_RS18780 PF00575 S1 RNA binding domain DESAF_RS18780 PF01138 3' exoribonuclease family, domain 1 DESAF_RS18780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DESAF_RS18780 PF00013 KH domain DESAF_RS18785 PF04228 Putative neutral zinc metallopeptidase DESAF_RS18795 PF01875 Memo-like protein DESAF_RS18805 PF00158 Sigma-54 interaction domain DESAF_RS18805 PF02954 Bacterial regulatory protein, Fis family DESAF_RS18805 PF06490 Flagellar regulatory protein FleQ DESAF_RS18815 PF02649 Type I GTP cyclohydrolase folE2 DESAF_RS18820 PF01402 Ribbon-helix-helix protein, copG family DESAF_RS18820 PF08753 NikR C terminal nickel binding domain DESAF_RS18825 PF05958 tRNA (Uracil-5-)-methyltransferase DESAF_RS18830 PF01597 Glycine cleavage H-protein DESAF_RS18835 PF02347 Glycine cleavage system P-protein DESAF_RS18840 PF02347 Glycine cleavage system P-protein DESAF_RS18845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DESAF_RS18845 PF07992 Pyridine nucleotide-disulphide oxidoreductase DESAF_RS18850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DESAF_RS18850 PF00672 HAMP domain DESAF_RS18850 PF02203 Tar ligand binding domain homologue DESAF_RS18865 PF03190 Protein of unknown function, DUF255 DESAF_RS18880 PF02687 FtsX-like permease family DESAF_RS18880 PF12704 MacB-like periplasmic core domain DESAF_RS18890 PF00005 ABC transporter DESAF_RS18895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DESAF_RS18910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DESAF_RS18920 PF01702 Queuine tRNA-ribosyltransferase DESAF_RS18925 PF00633 Helix-hairpin-helix motif DESAF_RS18925 PF00730 HhH-GPD superfamily base excision DNA repair protein DESAF_RS18935 PF03091 CutA1 divalent ion tolerance protein DESAF_RS18940 PF00294 pfkB family carbohydrate kinase DESAF_RS18955 PF04324 BFD-like [2Fe-2S] binding domain DESAF_RS18955 PF01106 NifU-like domain DESAF_RS18955 PF01592 NifU-like N terminal domain DESAF_RS18970 PF04055 Radical SAM superfamily DESAF_RS18970 PF00919 Uncharacterized protein family UPF0004 DESAF_RS18980 PF02811 PHP domain DESAF_RS18985 PF02146 Sir2 family DESAF_RS18990 PF01618 MotA/TolQ/ExbB proton channel family DESAF_RS18995 PF02472 Biopolymer transport protein ExbD/TolR DESAF_RS19005 PF07676 WD40-like Beta Propeller Repeat DESAF_RS19005 PF04052 TolB amino-terminal domain DESAF_RS19015 PF00691 OmpA family DESAF_RS19020 PF04608 Phosphatidylglycerophosphatase A DESAF_RS19030 PF02545 Maf-like protein DESAF_RS19035 PF13488 Glycine zipper DESAF_RS19035 PF00691 OmpA family DESAF_RS19040 PF03462 PCRF domain DESAF_RS19040 PF00472 RF-1 domain DESAF_RS19045 PF02130 Uncharacterized protein family UPF0054 DESAF_RS19050 PF01966 HD domain DESAF_RS19050 PF07697 7TM-HD extracellular DESAF_RS19050 PF07698 7TM receptor with intracellular HD hydrolase DESAF_RS19055 PF02562 PhoH-like protein DESAF_RS19065 PF01258 Prokaryotic dksA/traR C4-type zinc finger DESAF_RS19100 PF04358 DsrC like protein DESAF_RS19150 PF00501 AMP-binding enzyme DESAF_RS19150 PF14535 AMP-binding enzyme C-terminal domain DESAF_RS19170 PF04233 Phage Mu protein F like protein DESAF_RS19235 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DESAF_RS19280 PF04493 Endonuclease V DESAF_RS19285 PF00288 GHMP kinases N terminal domain DESAF_RS19285 PF08544 GHMP kinases C terminal DESAF_RS19330 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS19330 PF00989 PAS fold DESAF_RS19330 PF00072 Response regulator receiver domain DESAF_RS19330 PF01627 Hpt domain DESAF_RS19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS19330 PF18415 Histidine kinase receptor ArcB trans-membrane domain DESAF_RS19360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DESAF_RS19435 PF00512 His Kinase A (phospho-acceptor) domain DESAF_RS19435 PF01627 Hpt domain DESAF_RS19435 PF00072 Response regulator receiver domain DESAF_RS19435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DESAF_RS19435 PF00672 HAMP domain DESAF_RS19435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS19440 PF00072 Response regulator receiver domain DESAF_RS19445 PF00534 Glycosyl transferases group 1 DESAF_RS19460 PF00072 Response regulator receiver domain DESAF_RS19505 PF02498 BRO family, N-terminal domain DESAF_RS19505 PF10548 P22AR C-terminal domain DESAF_RS19550 PF00877 NlpC/P60 family DESAF_RS19610 PF07484 Phage Tail Collar Domain DESAF_RS19630 PF05045 Rhamnan synthesis protein F DESAF_RS19630 PF14307 Glycosyltransferase WbsX DESAF_RS19635 PF00535 Glycosyl transferase family 2 DESAF_RS19660 PF13340 Putative transposase of IS4/5 family (DUF4096) DESAF_RS19665 PF00535 Glycosyl transferase family 2 DESAF_RS19680 PF13340 Putative transposase of IS4/5 family (DUF4096) DESAF_RS19725 PF00535 Glycosyl transferase family 2 DESAF_RS19735 PF01209 ubiE/COQ5 methyltransferase family DESAF_RS19755 PF01810 LysE type translocator DESAF_RS19775 PF00825 Ribonuclease P DESAF_RS19810 PF13340 Putative transposase of IS4/5 family (DUF4096) DESAF_RS19835 PF06890 Bacteriophage Mu Gp45 protein DESAF_RS19860 PF00253 Ribosomal protein S14p/S29e DESAF_RS19865 PF00444 Ribosomal protein L36 DESAF_RS19875 PF00665 Integrase core domain DESAF_RS19875 PF13276 HTH-like domain DESAF_RS19880 PF13340 Putative transposase of IS4/5 family (DUF4096) DESAF_RS19905 PF13340 Putative transposase of IS4/5 family (DUF4096) DESAF_RS19960 PF07043 Protein of unknown function (DUF1328) DESAF_RS19980 PF01527 Transposase DESAF_RS19985 PF00589 Phage integrase family DESAF_RS19985 PF14659 Phage integrase, N-terminal SAM-like domain DESAF_RS19990 PF02594 Uncharacterised ACR, YggU family COG1872 DESAF_RS20020 PF01679 Proteolipid membrane potential modulator DESAF_RS20040 PF13340 Putative transposase of IS4/5 family (DUF4096) DESAF_RS20050 PF13340 Putative transposase of IS4/5 family (DUF4096) DESAF_RS20065 PF00360 Phytochrome region DESAF_RS20065 PF08446 PAS fold DESAF_RS20065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DESAF_RS20065 PF01590 GAF domain DESAF_RS20065 PF00512 His Kinase A (phospho-acceptor) domain