        htpG    6182 ..    6210 +    -9  -5.47159   TAAGCCTTGAAAAAA        GGTTGTGTTC ACGATATAG GAACACAACC        TTTTTTGTATTCCGG 100 63
 GF1_RS00025 NONE
 GF1_RS00030 NONE
 GF1_RS00035    8156 ..    8166 +  -3.2  -3.27475   CTCTGAGATCGGCAG                 GATC CCC GGTC                 TGTTCTCCTGCAAGG  47 35
 GF1_RS00040 NONE
 GF1_RS00045   10134 ..   10176 +  -2.7  -3.42503   GGTGGCCAGTTCCAG GATCCGGGCGGCCGGGATC GCCACCG GGTCGCGGC-GAC-GGATC TTCTGGATCTTGGCC  46 321
 GF1_RS00055   11710 ..   11729 +   -10  -4.15044   GAGACAGGTATCTGA            TTGCAGGG AGGA CCCTGCAG             TTTGTTACCCGAAAA  85 26
        ychF NONE
 GF1_RS00065 NONE
        holB   15407 ..   15423 + -13.7  -3.54382   TATTTTTCCAGATCA              CGCCAGC CTG GCTGGCG              TTACTTATATTGACC  95 128
        ricT   16447 ..   16480 +  -3.7  -3.30124   CCTGAGCCTTGAATG     TGACCACCG-GGCAGG ACC CCTGCCGCAGTCGCCG     TTCTACAGAATCCGC  49 36
        metG   18491 ..   18505 +  -7.8  -2.53382   GCGCCGGTGGCCCCG               GGCAGC AGG GTTGCC               TGAGTTGGAGATCGT  56 8
 GF1_RS00085 NONE
 GF1_RS00090   19407 ..   19426 +    -5  -3.69323   GGTGAGGCCGACACC            TTCATCCA TCGG TGGCTGAA             TTTCAGTGGTAATCA  55 158
        cobJ NONE
        surE NONE
 GF1_RS00105   22001 ..   22026 +  -9.7  -2.52623   GGGCTCGATCCTGTA         GAGAAAGCGCG GTTC CGTGCTTTCCC          CTGTTCTGGCGGCCA  59 153
 GF1_RS00115   26213 ..   26232 +  -2.9  -4.02334   CGGCTATGCCAAGGT            GAAGAAC GGGGAG GTTTTTC             TTTATAATGTCCATA  58 233
        ssrA   26924 ..   26968 + -18.6   -4.7153   CACCATTTGAAAAAA GACAACCCGTCTCTCCGGGG TCATT CTCCGGGGTGACGGGTTTTC TTTTTCCCCTTGTTT 100 36
 GF1_RS00130   28945 ..   28992 + -23.7  -3.75169   TCCACCATTTTAAGA CGGAAACAGCCCGTCATCCTG AAACAC CAGGGTGACGGGCTGTTTTTG TTTCATGGCCTCGTG 100 250
 GF1_RS00160   37935 ..   37948 +  -2.4  -3.05384   CTATATTCACTCCGG               CGAT ATCGTG ATCG                TTCACTGACAGGGGA  42 4
 GF1_RS00165 NONE
        asnB   41485 ..   41495 +  -5.4  -3.03452   TCAGTTTTGTCGAGG                 TGAG GTG CTCA                 TGTCTGATATTGTTC  50 41
 GF1_RS00175 NONE
 GF1_RS00180   43370 ..   43401 +  -7.4  -3.14132   GTCGCAAGGAAGAGA      CCCGTTGATCAGAGT GAC GCTCT-ATCAACAGG      TTGATGACGCAGCGA  61 72
 GF1_RS00185 NONE
 GF1_RS00190 NONE
 GF1_RS00195   45389 ..   45399 +  -5.4  -3.66844   GATCAGGAACAGTGA                 TCTG TAA CAGA                 TTGTTGCAATATGAC  58 19
 GF1_RS00200 NONE
 GF1_RS00205 NONE
 GF1_RS00210   48017 ..   48029 +  -4.1  -3.34984   AGCACTACGATGCCA                GGATG TCC CATTC                CTTTTTCGAGGATCT  49 225
 GF1_RS00220 NONE
 GF1_RS00225   52492 ..   52502 +    -4   -2.6381   TCACCTGGAAGAAGT                 TTTC CCG GAAA                 TAATATGAAAATTGT  43 12
 GF1_RS00230 NONE
        asnB NONE
 GF1_RS00240   55877 ..   55909 +  -2.6  -2.85297   GTCCTGAATCCTGTA      TTTTACTGCTGCCG TCAAC CGGGAGCAGAATGA      TGATATTTCCCATAC  41 41
 GF1_RS00245   57446 ..   57458 +  -6.3  -3.87149   AATACTGCGGCGTCA                GACAA AGT TTGTC                TTTGCCTTTCATGGA  64 354
 GF1_RS00255   58256 ..   58267 +  -5.8  -4.65916   TGGGGAAGAAAATCT                TGCC TGAT GGCA                 TTTTGTTCACATGGA  77 19
 GF1_RS00260 NONE
 GF1_RS00265 NONE
 GF1_RS00270   62979 ..   62995 +  -3.8  -3.49568   TTGATTTCTTACAAT              CAAATT AACTG AATTTG              TATTGTTATGAATCC  51 14
 GF1_RS00275 NONE
 GF1_RS00280   66531 ..   66558 + -11.4  -4.12254   ATTGCATCTGGTTAT        TAATGGGTAGGC ATTG GTCTGCCCATTA         TTGTTTATGATCCTG  91 55
 GF1_RS00285 NONE
 GF1_RS00290 NONE
 GF1_RS00295   70749 ..   70759 +    -4  -3.92869   TGTCTCTGATCGCTT                 CAAT GTC ATTG                 TTTATCCATCCATAA  57 440
 GF1_RS00305   73097 ..   73109 +  -3.4  -5.00138   TTGCGGATTTCTCCT                GTTG CTCTT CAAC                TTTTTCCTTTCCATG  74 70
 GF1_RS00310   74459 ..   74472 +  -8.1  -2.91086   TCGAGGCTGAAACGG               CAGCC GTTT GGCTG                TATCCTCTCTCCTTT  58 31
        istA NONE
        istB   76918 ..   76934 +  -2.2  -4.46926   GGTGGGTCAATTTTT              TTGTCC GGGTG GGTCAA              TTTTGTCGTCCGGTA  63 153
 GF1_RS00330   78573 ..   78583 +  -6.8  -3.53444   TGCCGCTGAAGCCGG                 CCTG TGA CAGG                 TTTGCCCCCCGCTAA  61 197
 GF1_RS00390   94673 ..   94700 +  -9.9  -2.72558   GCCAGAAGAGACAGG        TGGGGCAGT-CC GCACG GGCACTGCCCCG        TCCTTGAGCAATTAT  67 450
 GF1_RS00400 NONE
 GF1_RS00405 NONE
 GF1_RS00410 NONE
 GF1_RS00415 NONE
 GF1_RS00420  101382 ..  101397 +  -6.1  -3.80855   GGGCCGCATGACGTT              GTCGC AAAAAC GCGAC               TTGCTTTTTGCCGGG  63 178
 GF1_RS00425 NONE
 GF1_RS00430  102931 ..  102947 +  -3.6  -2.73771   ACTCCGGGTAAGCGA              CCGAAG GGAGA CTCCGG              ATTTCGGCACTGTCC  43 102
 GF1_RS00435  103817 ..  103830 +  -3.7  -5.33866   GTCTGGCCATGCTGC               GGCGC CTGA GCCCC                TTTTTTGTCGGTTTC  86 55
 GF1_RS00440  105551 ..  105563 +  -6.2  -2.50074   GGTCAAGAAGGTTGA                CCGG AGTGG CCGG                GTGTATTCTGGCGGC  49 441
 GF1_RS00455  107814 ..  107826 +  -3.4  -3.60792   GGCCCGGGCAAGCCG                GATC CGGCC GATC                TTTCGCAGTTGCCGG  49 163
 GF1_RS00470  110332 ..  110351 +  -6.3  -2.52464   CAATGGCCTGTTCGC            CGGCCAG CTTGCT CCGGCCG             TAGGTTGACAGCGGC  48 509
 GF1_RS00485  113154 ..  113177 +  -6.6  -2.75528   GCTCCTGATAAGCGG          CCCGCAAGGA ATCG TCCTCGCCGG           TCCTGTCTTAACAAT  53 33
 GF1_RS00490  114830 ..  114842 +  -7.7  -3.01712   ATCTTTGAGGCCCAT                GGTCA GCA TGACC                TGTTGGCCCAGGGCC  56 205
 GF1_RS00500  116744 ..  116768 +  -7.8  -2.59793   CAGTTCTTCGGGCCG         GCGGCCTGGCC TGCC GTCCAG-CCGC          GTCTTGTCTGGATGG  56 70
 GF1_RS00505  118245 ..  118255 +  -6.8   -3.5525   CCTGGTCGCTCGCCG                 TCCG TCA CGGA                 TTTGGGAGAATGTCT  61 236
 GF1_RS00510  118759 ..  118777 +  -5.2  -3.06815   CTGTTTTGCTGCTCC             GGCAGGGT CTG ACGCTGTC             TGTCTTCGACACACT  50 57
        glnD  121505 ..  121517 +  -6.2  -3.54741   GTATAGGGGAAAACG                CCGG GTCAA CCGG                TTTAAGGCAATCATC  58 117
        ltrA  125105 ..  125132 +   -12  -2.52635   CGGGCATGCGCCGGT        GGTCGGAGAGGT TGCC ATCCCTCCGACC         CTTCCTCCTAGCGGT  72 178
 GF1_RS00535  127645 ..  127657 +  -7.7  -2.82516   ACAGTGAACCGGTGG                CTGTC CAG GACAG                TCTGGTCGTGGAAGA  57 409
 GF1_RS00565  134331 ..  134348 +  -4.7  -4.00042   GATGTTGATTGCCAG             CTGGTCG GCCC CGGCCTG              TTCTTTGGTCAGCGC  62 522
 GF1_RS00585  138627 ..  138641 +  -5.6  -3.01791   CCGTGATGGTCGGGC               CGGGTG GTA CGCCTG               TCTTGCCGGGAGCCT  50 49
        cysS  141186 ..  141199 +  -6.7  -2.62515   CATTAGCAATCCATC               GGATC TGCA GATCC                TGCTGTCGACGGGTT  52 74
 GF1_RS00595  141331 ..  141362 +   -21  -5.40072   CCAGAACATCCCACA      GACCCGGTCAGGAA GTTT TTCCTGGCCGGGTC       TTTTTTTGGGGCAAA 100 38
 GF1_RS00610  144278 ..  144297 + -13.6  -5.14985   TAGTTGGGTACTCAA            GCGCGAAG CCGA CTTCGCGC             TTTTTCTGTGTTTGC 100 126
        ltrA  146402 ..  146426 +  -3.4  -4.84761   CCCTACTCGATTTTC          AGGCTCCCGG ATAGC TCTGGAGCCG          TTTTTGTAAGGATAT  71 124
        typA  148717 ..  148727 +  -8.2  -3.60296   GAGGCCGTGTGCTGA                 CGCG GGT CGCG                 TTTCGGGTCGGAATA  62 500
 GF1_RS00655 NONE
 GF1_RS00660  155807 ..  155855 +   -17  -3.89301   TTTCAGGGCCTTGGC CAGGACATAAAAAAGGGCAGACG TTTT CGTCTGCCCTTTTTT-TGTGCAG TGTTTTCTCTCAGTT 100 56
 GF1_RS00670  158906 ..  158920 +  -5.6  -2.52543   AACATGCTGCCTTGA               GCCTGG GCT CCAGGG               TGGCTTACCAGAGAT  47 26
 GF1_RS00675  160263 ..  160294 +   -21  -5.60993   CTGTGGTTTTGTCCG      GGCGGAGTGATCTG ATAA CAGATCGCTCCGCC       TTTTTTTGTGCCGAA 100 80
 GF1_RS00700  165840 ..  165854 +  -9.2   -5.9003   GTCGGTGTTTTGAAA               GTGGGC TCT GCCCGC               TTTTTTTATTGCTTT 100 116
 GF1_RS00705  166504 ..  166520 +  -3.6  -3.08201   ACTCCGGGTAAGCGA              CCGAAG GGAGA CTCCGG              GTTTTGGCACTGTTC  46 99
 GF1_RS00710 NONE
        nusA  168360 ..  168371 +  -7.2  -3.01712   GCGAGAACACAGTGT                GCCG TACG CGGC                 TGTTGAAAAAAAAGA  56 182
        infB  171356 ..  171367 +  -2.2  -4.11216   TGGTTTTCGACTAAA                CTTC TATT GGAG                 TTTTCCGGGTCAGGG  56 147
        rbfA NONE
 GF1_RS00730 NONE
        truB  174009 ..  174025 +  -8.7  -4.88736   GCGAGCTGAAACATG              GTACCTG CAG CGGGTAC              TTTTTATAGATGATG  93 434
        rpsO  174472 ..  174498 +   -18  -4.56775   CTGTCAGGTAATCAG         AACTCCGGGGGC AGG GCCCCCGGAGTG         TTTTTGCAGGAAAAT 100 46
         pnp  176824 ..  176848 + -11.5  -6.24157   GACCGTGATATGCAG          GGGAGTGGA ATTTGTA TCCACTCCC          TTTTTTTTTGTGGCT 100 69
         dut NONE
 GF1_RS00780  184243 ..  184260 +  -6.9    -4.258   ATGTGCGGGCTGACC             CGTTGGC GGAT GCCGGCG              TTTCTTGCTGCCTCG  74 395
 GF1_RS00815  192141 ..  192157 +  -4.3  -2.87132   ACGGCCCACGGCCAG              CCCGGAG CCG TTCAGGG              TGTGTACCAGGCGGC  44 223
 GF1_RS00825  195181 ..  195209 +  -2.3  -5.45726   TCATAACGGGTGTAC        AGTCCGGTCAG GCAGGCG CTGACCAGGCA        TTTTTTTACAGTATG  84 409
 GF1_RS00835  195653 ..  195665 +  -6.2  -2.73483   TGCCGGTATCGGTCA                GGCC ACCCG GGCC                TGATTCGACTACGCT  51 99
 GF1_RS00845  196892 ..  196910 +  -5.8  -3.33696   GTGAACGCATGGCCA             CAAGGCCG CGC CGGCCCAG             TTCCTTGAAGAACGA  53 73
 GF1_RS00880  204195 ..  204225 + -16.8  -6.09133   TCAATAGACAGTAGA       CGGCGGTTTCCCGG ATC CGGGGGAGCCGCCG       TTTTTTTTTCAGGTC 100 136
 GF1_RS00885 NONE
 GF1_RS00890 NONE
 GF1_RS00895  207166 ..  207204 + -24.9  -5.39681   GTGTGGCGGGAGTAT   GGCGTCTTTCCAGAGAA TCTGT TTCTCTGGAAAGACGCC   TTTTTGTTTGCTTAT 100 64
 GF1_RS00925  214123 ..  214137 +  -4.2  -2.62515   ACTCCCCGGCCAGCC               GGGTCA GCC TCACCC               TGATCTCGAGGAATT  43 308
 GF1_RS00990  231233 ..  231272 +  -8.4  -2.93073   CAGCATACCCATGTT  CCGGGCCGTGGCCAGC AGGCTCGA GGTGACCCCGGCCTGG   TGATTGTTGACCCCG  59 251
 GF1_RS01030 NONE
 GF1_RS01035  239731 ..  239748 +  -6.9  -3.54475   GCTGGTCACGGTCCC             GGGAGCG GTTC CGCTCGC              TTCTCTGCTGCAGCG  60 359
 GF1_RS01060 NONE
 GF1_RS01065 NONE
 GF1_RS01070  247066 ..  247087 +  -2.9  -3.76771   TGTCCTTGAGCAAAC           GCGGCCTTGA CAA TCG-GCCCGC           TTCTGTTAATATTAT  53 32
 GF1_RS01075  247202 ..  247228 + -17.4  -5.56264   CCAAGTAAAATCAAA         GGCTTAGGGAGT GCA GCTCCCTAAGCC         TTTTTTGTGTTTGCC 100 38
        ltrA  249280 ..  249326 +  -5.1  -4.94147   CGTACGTACGGTTCT GTGAGAGGGATGAGGCAAG CGTAATTAA CTTGCCTCACCCTACTCGA TTTTATTCTGTTCTT  80 72
 GF1_RS01095  251516 ..  251544 + -16.1  -5.67063   CCCCAGTTGCGAACA        GGACCGGTTTGGA ATT TCTGAACCGGTCC        TTTTTTTGTCCTGCG 100 105
 GF1_RS01100 NONE
 GF1_RS01105 NONE
 GF1_RS01110 NONE
 GF1_RS01115 NONE
 GF1_RS01120 NONE
         tpx  259023 ..  259042 +    -5  -3.69323   AGCGAGGCCGACACC            TTCATCCA TCGC TGGCTGAA             TTTCAGTGGTAATCA  55 374
        nifA  261970 ..  262023 + -12.7   -3.1372   GCCTGCTGCGTCACA GCTTCAAAAAGAGTCCTCGAAATAT TTCA ATATGTCTGCGGCTCTTTTTGAAGC TGTTCCTCGAAGGTC  81 165
 GF1_RS01225  280084 ..  280101 +  -6.3  -3.53012   AATCAGTAGTGCTGT             TCAGGCA GGAC TGCTTGA              TTTCGGCCCAGGAAA  58 73
 GF1_RS01230  282100 ..  282120 +    -6  -2.87132   CGATGTGATGACCTG            ACCCGCCG TCAAT CGGTGGGC            TATATCAAAGAGCAC  52 25
 GF1_RS01235  283084 ..  283100 +  -6.5  -2.84325   GATTTTTTCATCACT              TTCAGCC GAA GGCTGAC              TGATCTTTGAAAACG  52 106
 GF1_RS01245  286044 ..  286066 + -10.4  -2.91728   GTGGCGTCGATCCAG           GCCGCGCCGG CTT CCTGGGCGGC           TATGCTGTTGGCCGT  64 514
        thiC NONE
 GF1_RS01280  292917 ..  292955 +  -5.1  -3.45571   GCCGATCCTGATGTT   GCCCTTCCATGGTGCAG GCCCG CTGTCCCGGGGAGCGGC   TTCATCTTTCCCGGG  56 30
 GF1_RS01285  294115 ..  294143 +  -7.4  -5.40072   GCGGGTAAAAAAGAA       CCGTGCGCCCGGT GCGG ATCAGGCG-ACGG        TTTTTTTGAAGACCA 100 48
 GF1_RS01300 NONE
 GF1_RS01305 NONE
 GF1_RS01310 NONE
 GF1_RS01315  299594 ..  299617 +  -4.7  -5.46698   GCTCAATGAAAAATG          CTC-GCATAT GTTTA ATATGCTGAG          TTTTTTAATTTTGCC 100 144
 GF1_RS01320 NONE
 GF1_RS01325  301534 ..  301582 +    -8   -3.9777   GGTGCAGTTCGGTGA GCTGCTTG-CGGGCCACCGGGGC CGGG GCCTCGGTGAGCGGACAGGTGGC TTTCTGGGTCTTGGG  71 112
 GF1_RS01340 NONE
 GF1_RS01345 NONE
 GF1_RS01350  308529 ..  308545 +  -2.3  -4.15565   GCGGCTGATTTTCCA              GAAATCA AAA TAATTTC              TTTTCCACTGGTACC  59 241
        ltrA  311278 ..  311322 +  -8.6  -2.72144   GTACGTACGGTTCTG TGAGAGGGATGAGGCAAG CGTAATTAA CTTGCCTCACCCTACTCG ATTTGCCCGGCATGG  60 73
        ltrA  313350 ..  313361 +  -5.8  -3.48395   AGCCGTATACGAGGC                CCGT ACGT ACGG                 TTCTGTGAGAGGGAT  58 57
 GF1_RS01395  323235 ..  323248 +  -3.7  -3.12327   GACAGATATGGGGGA               CAGGG ACCA CCCGG                TATTCCGTGTGCCGC  46 69
 GF1_RS01400  323571 ..  323594 + -12.4  -4.10958   TTGGGAACAAAAAAA          GGACCTGGCC TAAT GACCAGGTCC           TTTGCTGTTTTCTGG  95 71
 GF1_RS01420  328874 ..  328886 +  -9.1  -3.34013   GTGAAAATATGTGGT                CCAGC CAT GCTGG                TTCGTTCAAAGGGTA  69 110
         lnt  330491 ..  330505 +  -3.5  -3.34517   GCTCATTTTCTGGCG              CC-GCC GCTA GGCCGG               TCTTTCCCGGGAGGT  49 16
        prfB NONE
 GF1_RS01435 NONE
 GF1_RS01440  334300 ..  334328 +  -5.3  -4.23988   GTCGCCTGTATATTT       GTC-GGACCTGC TGAACT GCAGCTCCTGAC        TCTTTTTTCATGTAA  67 77
 GF1_RS01445  337062 ..  337083 +  -2.9  -3.74693   CGGGCGGTCCTCTTC           TGCAACCGA TCCC TCGATTGCC            TTTCATCCCATAAAG  53 54
        nadC  338161 ..  338197 +  -3.8  -3.59262   CGAACAGCTGCACCT   GACCCTGC-GTTT-CATC GGC GATGTGGACGGTGGGGTC   TTTGCCGATATCCGC  53 239
        thpR  338923 ..  338939 +  -9.4  -2.56747   ATCGTTATGGACCCG              GGCCAC GATGA GTGGCC              GTGTTCTACTCCATC  60 367
         rnc NONE
 GF1_RS01475 NONE
 GF1_RS01480  343582 ..  343618 +  -4.4   -5.1925   GAAATAGACAATATC   GTACGGCTCCTTCCAGG TAAT CCTGGCAT-AGCCGTAG    TTTTTTCGGTTCTGA  86 330
 GF1_RS01505  348142 ..  348160 +    -3  -3.31322   AATCCCGTCAGGCAG             GTCTGGCA AAC TACCGGGC             TTGTCAACAATTCAC  47 101
 GF1_RS01510  349435 ..  349451 +  -4.4  -4.57569   ACCGGTGGTGACCTG              TCCTTG CTGGA CAGGGA              TTTTTCGCGGCATGA  70 42
 GF1_RS01580 NONE
 GF1_RS01585  378094 ..  378104 +  -3.2  -3.41527   ATTCCTCGCCACTGT                 CTAG CAA CTGG                 TTGTCCTGGCAGTTG  47 253
        iorA NONE
 GF1_RS01645  392691 ..  392711 +  -4.7  -3.05596   CCGGGCGGCGGGAAA           GCGGAGAC GGATCA GTC-CCGC            TTCGGTGACGGGGTG  48 46
 GF1_RS01650  394100 ..  394110 +  -2.4  -2.98714   GGTGGGACGTTTATA                 CCCC CTG GAGG                 GTTTGTCATGCGTGT  42 44
 GF1_RS01655 NONE
 GF1_RS01660  395772 ..  395807 + -16.3  -5.79526   ACAAGGCGACCCCTG    GCGGACAGAAGAGTA TTCTTT TTCTCTTCTGTCCGC     TTTTTTTTGCCATAT 100 40
 GF1_RS01665 NONE
 GF1_RS01670 NONE
 GF1_RS01675 NONE
 GF1_RS01680 NONE
 GF1_RS01685  400699 ..  400725 + -15.2  -6.07627   TTCCATCCTCTTGGT         GCGGTTGTTCCT GAC GGGAACAGCCGC         TTTTTTTTTGGGCGT 100 71
 GF1_RS01690 NONE
 GF1_RS01695  403086 ..  403101 +  -4.6  -5.34555   AGCCCAGGCGTTCAT              CGCCTC TTTT GGGGTG               TTTTTTCTACTGTCC  90 97
         rph  404089 ..  404112 +  -3.2  -4.15854   AGACTAAGAAGCAGA          TCAGGTTATGC TGT GC-TGATCTGA          TTTTGCAGTCCGTTT  60 34
 GF1_RS01730  414561 ..  414573 +  -7.7  -3.23274   CCGGGTGCCAGCTGC                CCTGA TGT TCAGG                TTCCGTTGTGCGAGC  61 486
 GF1_RS01755  420879 ..  420903 +  -5.5  -3.96624   TTCTGGTCAGGGGTT          CCCGGGATCGG TTC CCGGGCCTGTG          TTTCTGATGGCAATG  63 49
 GF1_RS01775  428060 ..  428071 +  -2.2  -4.14739   AACAGAGCCGTGGTT                GGCA ATGC TGTC                 TTTTAAACTGAATGC  59 437
 GF1_RS01825  438502 ..  438518 +  -3.7  -3.03701   TTCGGTTTTTTCTCC              GGGAA AACCGCC TTCCC              TGTCGTTTCATGCCG  46 126
 GF1_RS01835  440317 ..  440331 +  -5.7  -3.72576   GCCAGTTCTGTGAAA               GGGAT TTTTC ATCCC               TTTCGTCACGGACAG  61 353
 GF1_RS01840  441917 ..  441927 +  -5.4  -3.05463   ACCTTCTCCCTTTCC                 GGAA GAC TTCC                 TTAACTCAAACCCGT  49 472
 GF1_RS01870  446640 ..  446664 + -10.7  -4.98531   CAGCCAGGAAAAAGA         CCCGCC-CCG TTGTTC CGGAGGCGGG          TTTTTGGTTTGCCCG 100 150
        ltrA  448713 ..  448759 +  -6.5  -5.00616   CGTACGTACGGTTCT GTGAGAGGGATGAGGCAAGCT TAATT ACCTTGCCTCACCCTACTCGA TTTTTTGCGGGCAGG  83 72
 GF1_RS01880  450053 ..  450065 +  -6.9  -3.06183   TGATCCTGTACGCCA                TGGCC TTT GGCCG                TTGAGTGGCAGTAAG  56 9
        nadA  451593 ..  451614 +    -3  -2.94232   GGCCTGAGCCCCTGC           CGGCCA-TG CGGCT CAGTGGTCG           ATTCTTTCCAGCACC  42 34
 GF1_RS01895  453098 ..  453121 +  -3.8  -3.14881   GGCATAAGGATGCCG          CCCCGG CCGATCAGGGTA CCGGGG           TTGGTGACCGAGTTG  47 34
         lon  456631 ..  456643 +  -9.1  -6.06529   CTTTGGGAGCGGCGG                GGGTG ATA CACCC                TTTTTTTTGTGTATG 100 110
        mltG  458154 ..  458183 +  -4.4  -4.23892   GTAGATGCCATGGGC      TCGACCGGGATCCCG GTT CGGG-T--CGGTCGA      TTTTCCCTGGTTCAG  64 80
 GF1_RS01920  461342 ..  461352 +  -6.8  -2.87931   GTGGAAGAGTGAGAG                 GGAC CCG GTCC                 TGTCTCGCCCATCGG  54 29
 GF1_RS01925  463246 ..  463274 +  -4.4  -2.58812   CAGACTTGCTCCCTT        CGCGCATCTGGC CCGCT GCCAGACGCTCA        TGAATTCAGTTTCAC  45 86
 GF1_RS01930  464028 ..  464082 +    -2  -3.28712   TCCATCCTTGATCCC CCTCTGTGCCCTG-GCTATTGCAGG CTATAT CCTCCAAGAGCGCCTGGCACATCGG TTATGAGGCCACGCA  45 139
 GF1_RS01935  464585 ..  464607 +    -4  -4.26344   TCGGGCGCAGCGACA           GGGCGCTC AATTGCC GGGCTCCC           TTTTGCTGAACCTGT  65 251
 GF1_RS01945  466318 ..  466346 +  -3.1  -3.65722   GAAGGATTAATCCCT        CTCTTCAGGGA GGGCGGA TTCCTGGTGAG        TTTGCGGGTTGTTTT  51 345
 GF1_RS01965 NONE
        nrfD NONE
 GF1_RS01975 NONE
 GF1_RS01980  479163 ..  479173 +  -4.6   -3.6682   AGGACTGGTGGAAAA                 CGCT ACC GGCG                 TTTGCCTGAATACAG  55 359
 GF1_RS01985  479821 ..  479832 +    -3  -4.93296   CCGGGAGAGTGTGCT                TATC AGTC GATA                 TTTTTCTGCTACTGC  74 155
 GF1_RS01990  484237 ..  484252 +  -3.3  -3.28712   ATCGGATAACCGAGT              TGCAT CACTGC ATGCA               TTGTGAGAACACCCC  47 238
 GF1_RS01995 NONE
 GF1_RS02000  485469 ..  485485 +  -5.1  -4.62302   GTCCATAGTTGTGCT              CCAGG TTGTAGC CCTGG              TTTTTCAAGGTATTG  72 457
 GF1_RS02010 NONE
 GF1_RS02015 NONE
 GF1_RS02020 NONE
 GF1_RS02025  489705 ..  489715 +  -4.6  -3.57462   AGCGTTGCGTTGGGC                 CGCC CGG GGTG                 TTTGGAGATGGCATG  55 239
        ltrA NONE
 GF1_RS02035  491779 ..  491802 +  -7.4  -2.87931   TCGAAGTCTCCGCTC          GTCATGCGGT CGTT GCCGCATCAC           TATCTGCGCGGTCGC  58 119
 GF1_RS02040  493251 ..  493266 +  -2.5  -3.41393   GCCACCCGGAAGTAG              CTTCC TGAACT GGGAG               TTGTACGTATATGAT  45 18
 GF1_RS02045  494024 ..  494034 +  -4.6  -3.28712   TCTTTTATGAGACCC                 TGCC CCA GGCG                 TTCTGGCCGAGCAAA  51 265
 GF1_RS02050 NONE
 GF1_RS02055  495951 ..  495967 +  -9.5  -3.17075   GTGTCCGTCCGGGAA              CATCTGT GGG ACAGATG              TTCCGTTCCAGGGAC  67 268
 GF1_RS02060  497869 ..  497885 +  -5.1   -2.9914   GCGTACTGTCATCTT              GTGGTAT TGC AGACCAC              TCTATCTGGAAAATG  50 321
 GF1_RS02065  498706 ..  498718 +  -4.1   -2.8805   GTCCCGCTTCAACAT                TTCTC TGA GAGGA                TATGTACCCCATGCT  45 246
        phnD NONE
 GF1_RS02075 NONE
 GF1_RS02080  502623 ..  502639 +  -5.1  -4.61482   CACGATATTGCAAAG              AGGAGAA CAG TTCTCCC              TTGTTTTTTAAAACC  75 182
 GF1_RS02090  505981 ..  506004 + -12.4  -5.37593   CTTTCCTTTTGAAGA          GGCGGTATCC GTGC GGGTGCCGCC           TTTTTTAGTTTGCCC 100 67
        ltrA  508056 ..  508102 +  -6.5  -4.65916   CGTACGTACGGTTCT GTGAGAGGGATGAGGCAAGCT TAATT ACCTTGCCTCACCCTACTCGA TTTTGTTCCGATACG  77 73
 GF1_RS02105  510342 ..  510352 +  -8.2  -2.58249   CCGGCTGCCCGCCCA                 GGCC CGA GGCC                 CTTCTCGAGGGTATC  59 407
 GF1_RS02115 NONE
 GF1_RS02120 NONE
 GF1_RS02125 NONE
 GF1_RS02130 NONE
 GF1_RS02135 NONE
 GF1_RS02140 NONE
        nuoK NONE
 GF1_RS02150 NONE
 GF1_RS02155  516402 ..  516428 +  -2.9  -3.04398   CTGACCTTGAAAGTT        TCCTGCGCCACC CCCG GGTGGACC-GGA         CTTTTACAACACCAA  43 101
 GF1_RS02160 NONE
 GF1_RS02165 NONE
 GF1_RS02170  521308 ..  521337 + -21.5  -6.08563   CAGTACACACAACAG       GCCCGGCCGGAGA ATTT TTTCCGGCCGGGC        TTTTTTTTGTCTGTT 100 59
 GF1_RS02175  522935 ..  522957 +  -6.8  -4.06533   ACGGTCAGGTCATGT           TCCGTCAGGG TGG CCCGGGCGGC           TTCTTTGCTGATTTC  68 253
 GF1_RS02185 NONE
 GF1_RS02190  526796 ..  526807 +  -4.4  -3.17901   TCCTGTTCCTGCAGT                TGAC GATT GTCA                 TTGCCTTCGGGGTGT  49 137
 GF1_RS02195 NONE
 GF1_RS02200 NONE
 GF1_RS02205  529666 ..  529677 +  -5.8  -2.57721   CGGCCTGGTGCGTAC                CCTG TGAT CAGG                 TACCTTGCTCACTTC  50 70
 GF1_RS02210  530862 ..  530872 +  -2.4  -5.06505   ACAAGGCCTTGAAAG                 GGCG GTT CGCG                 TTTTTCTATGTGATT  74 192
 GF1_RS02215  532304 ..  532324 +    -6  -2.87132   CGATGTGATGACCTG            ACCCGCCG TCAAT CGGTGGGC            TATATCAAAGAGCAC  52 25
 GF1_RS02220  533203 ..  533221 +  -8.8  -3.18849   CGGCGTTCGAGGATT             TCCGGGTC CGT GATCCGGG             TGTTGGTCATATGGG  63 453
 GF1_RS02280 NONE
 GF1_RS02285  553687 ..  553698 +  -2.2   -4.3586   TGAAGTGTGCCGAGA                CTGT CCGA GCAG                 TTTTGCTGTACGTCG  60 228
 GF1_RS02290 NONE
 GF1_RS02295  556756 ..  556798 +  -8.5  -2.70932   GGAATAGCCGTTTTT TCTGC-CCTGCATGGTATCG GTGC TGAGGCCATGAAGGCGCAGA TCCTTGAAAAAACGG  60 34
 GF1_RS02300 NONE
 GF1_RS02305  558359 ..  558369 +  -4.6  -2.89971   AAAACCAGTGTCCCC                 TGCC GCC GGCG                 TCTGCTCTGTGCTGC  47 53
 GF1_RS02310 NONE
 GF1_RS02315 NONE
 GF1_RS02320 NONE
        rsfS  562661 ..  562692 + -10.8  -2.79796   GTATCGATTATATGC      GCCA-GCTGGCCCGG GAA CTGGACCGGCTTGGC      TGTGGTCAGGTGGCG  70 521
        thrC NONE
 GF1_RS02340  566089 ..  566105 + -13.7  -2.78596   TCCACCTGGACCGTC              CGGCCTG AGA CAGGCCG              TGTGCTCCAGCCGTC  85 18
 GF1_RS02345 NONE
 GF1_RS02350  567156 ..  567177 +  -4.4  -2.78384   TTGTTTTTCGGGTCC           CCGG-GGGA GGAAA TCCTGCCGG           TGTCCTGGAAAAAGA  46 63
 GF1_RS02355  568596 ..  568612 +  -4.3  -3.06915   GAGTCCGGACAGAGG              GTTCCGG GTT CCAGGAC              TTCCGTCGGGTACGT  48 84
        tatA NONE
 GF1_RS02365  569294 ..  569304 +  -4.6  -5.10004   GTGATATCGTGGCAG                 GGCG CCG CGTC                 TTTTTGGTTGTTTTT  81 63
 GF1_RS02370 NONE
 GF1_RS02375 NONE
 GF1_RS02380  573689 ..  573723 + -24.4  -5.61596   TCCATAGGGTGATAC     GAGCAGGGGCGAGGTG ATC CACCTCGCCCCTGCTA     TTTTTTTATGAACCT 100 52
 GF1_RS02395  575685 ..  575716 + -23.8  -4.05788   ACAACACGGCTCTCG      CAGGCCGGTCGGGA TCTC TCCCGGCCGGCCTG       TTTCATTTCAGGCGC 100 80
        mutL NONE
 GF1_RS02420  580313 ..  580345 +  -5.6  -4.32607   ATAAAAGATAACAGC     CAGACCGGGTGGCCGT GGA GCGGT-GC-CGGTCTG     TTTATTCGGTTTTCA  70 120
 GF1_RS02425 NONE
 GF1_RS02430  582619 ..  582638 + -12.8  -3.30771   ATTTCCTGCTTTCCA            GGCCGCCG ACCA TGGCGGCC             TTGTCCACGGTGTCC  79 405
 GF1_RS02480 NONE
        hisD NONE
        rsmG  595441 ..  595456 +  -6.1  -2.77036   TGGTTGCGGCCGGAT              GCAGG AAAATC CCTGC               TGGTATGTTCCGTTC  51 98
        leuB NONE
         prs  597582 ..  597618 +  -8.5  -6.06723   CGAAACAGTAACGAT    GTCCGGCGGTTCCTGCT GGT GGCAGGGCCCGCGAGGC    TTTTTTTTTAGGGCA 100 50
         asd  598818 ..  598860 +  -6.9  -5.32882   CTCGGACGGATCTTT GGAAGGGGCTGTTCCGCCG ACACA TGGCGGGATGGTCCCTTAG TTTTTTGTCGTGGTA  95 50
 GF1_RS02550 NONE
 GF1_RS02555  610245 ..  610297 +  -5.4  -3.05963   TGAGCAGGTTCCGCC TT-CCCGCCAGCCTGTCATG-CCCCG GTC CGGAGACCTGGCCGGGCGGCGGGCAA TGTTCCGGTGCAGGT  50 38
 GF1_RS02560  611912 ..  611935 + -15.3  -5.63012   ATATTATCACCTGGA          GCCGCTGCC TCTGCC GGCAGCGGC           TTTTTCTTTGTTTTT 100 117
        grpE  612932 ..  612951 +  -4.9  -2.79796   CTCCAGGTAAGTGAA            GACTCCG GATAGA CGGAGAC             TCTGATGGAGTAGGG  46 135
        dnaK  615005 ..  615031 + -14.5  -6.31682   CTATCTGTTCCAACA         GGGAGTGCGGA GAAAA TCTGCACTCCC         TTTTTTTTTGATTTT 100 50
        trpS  616691 ..  616703 + -10.5  -2.71681   CTGGCAAGGCCAGGC                CCCGC TAC GCGGG                TGCTTCGCAGCCTTG  70 400
 GF1_RS02670  635161 ..  635189 +  -4.5  -4.46404   TAATATGCTGCGCTT        TTCGCTGAACAGT CAA GCTGTCCGGCTAA        TTTTGCTGTTCCTTG  70 112
        carA NONE
        carB  639930 ..  639940 +    -4  -3.94724   GCGACGTCTGACCCG                 GTAA GGA TTAC                 TTATTATATAATTTG  58 248
        ftsH  641976 ..  642014 +   -17  -3.66356   GTAAAGTTTGGCCAG   TACACAAAAGGCACAG TGAATAC CTGTGCCTTTTGTGTG   TTTCACCTTCAACCT 100 59
 GF1_RS02695  645667 ..  645677 +    -4  -4.59511   GGATTGGCCCCGGCT                 GAAT CGA ATTC                 TTTTTCCGGCCTGTT  70 173
 GF1_RS02700 NONE
 GF1_RS02705 NONE
 GF1_RS02710  648586 ..  648622 +   -11  -2.53759   TGCTTGCCACCGGTG   GCTGGTTGTCGATATCG GCCA CGATATTGACGGCC-GC    TGCCTTGGCCATCTT  65 326
 GF1_RS02740  652101 ..  652117 +  -5.1  -2.89881   TGAAAGTGTCGGCCT              CACTTGT TGC ACGGGTG              TCTGTGGCCTGGATG  49 167
 GF1_RS02750 NONE
 GF1_RS02755  659611 ..  659637 + -20.2  -5.75342   CTCCTTTCTCCTTTT         CCGGCTCGGCCA TTG TGGCTGAGCCGG         TTTTTTTTCAAGGCC 100 316
 GF1_RS02760  660746 ..  660756 +  -5.4  -3.83026   TTTTATAGAGGGGGA                 CATG AGG CATG                 TTTGATCTGAAGGGA  61 165
        fabL  661566 ..  661578 +  -3.3  -4.18817   TGATCCGGCCCAAAT                CCGGA GGG TACGG                TATTTTTATTGAATT  60 85
 GF1_RS02770  663225 ..  663246 + -17.3  -2.62184   TCTCTCTCCATATGA           CGGACCCGC AACG GCGGGTCCG            TCATATCCCCGCCGC 100 67
 GF1_RS02775  665250 ..  665264 +    -5  -2.57327   CGTTTTGTAACTGAG               TCGTTG CAG TAACGA               GATATTTTTTTTGGA  45 14
        metK  666601 ..  666614 +  -8.1  -2.87931   CAAAAAGAAAAAATC               TCCCG GAAA CGGGA                TCTATGGAGAATGCA  58 166
        ahcY  667973 ..  668007 +  -3.6  -6.12458   TCATCCGGGTATCGA    GGCACTGAGGGA-GA GACATA TCGTACCTTGGTGCC     TTTTTTGTTTTTTTG 100 82
 GF1_RS02790  668776 ..  668799 + -19.6  -3.18264   CGAGCGTTAGTAATC          CCGGCCCTGG TCCG CCAGGGCCGG           TTGATCCATAAAGCG 100 31
        ltrA  672109 ..  672143 +  -4.9  -3.12668   CTCTACTCTACACCC     GTTTCCCGGGACG CCATAAACC CGTCCCTGGGGGC     TTGACTGTGGCCATC  48 192
 GF1_RS02820 NONE
 GF1_RS02825  676292 ..  676307 +  -7.6  -3.53224   ACTGCCCGCAAGCTG              TCAGCA TCGG TGCTGA               TTTGAGGAAACAGTG  64 80
 GF1_RS02830 NONE
 GF1_RS02835  678095 ..  678112 +  -2.6  -3.53012   CCTGAACAGGTGCTG             CCGGCT GCTTTG ATCCGG              TTTCCAGCCGGGCAG  47 36
 GF1_RS02840  678802 ..  678824 +  -9.2  -5.84432   GGCAGAAGATATCAG           GGGCACTT TTTCTGC AAGTGCCC           TTTTTTTGTCTTCTG 100 60
        hisB  687698 ..  687722 + -10.7  -3.05384   CATGGCTGACCTCCG          GGACCGGCG TGGTGGC TGCCGGTCC          TTGCCTCCGGGCAGG  72 57
 GF1_RS02900 NONE
 GF1_RS02905  689253 ..  689264 +    -3  -2.78867   CTGCAGATCCTGTTC                TTAC CCTG GTAA                 ATTCTTGAAACTTCA  41 42
 GF1_RS02910  690409 ..  690425 +  -5.1  -3.62597   AAATGACGGTTCCTG              CCTGG CCAATCT CCAGG              TTATTGCCGAATCGA  58 249
        hflX  693909 ..  693923 +  -8.5  -4.11216   GGTACCTGCCCACGG               CGGCC TTTTT GGCCG               TTTTGCAGGTCGGGC  78 435
        glmS  697125 ..  697141 +  -2.2  -4.20696   CTGGACAGGTCTCCT              CCGG TCGTCCGCC CCGG              TTTTCCGGTTGCTGC  58 105
 GF1_RS02945 NONE
        lpxD  699583 ..  699593 +    -4  -2.71712   CCATTTGCAGATGGG                 TGAA ACG TTCA                 ATTTAGGACAGGAAA  43 74
        fabZ  700073 ..  700085 +  -3.3  -2.75229   CGAGGCACAGCTCAT                GGCCA CCT TCGCC                TGATTGGCCATTTTG  41 10
        lpxA NONE
        lpxI  701848 ..  701867 + -10.8  -3.18264   TACTCGCCTCTTTTT            CCTATCAG CACC CTGATAGG             TTCCTGGATCCCCAC  74 65
 GF1_RS03010  718165 ..  718185 +  -8.1  -3.65199   GGAAGATGCCGGCGG            CAAGGGCGG CTT CCGCCCCGG            TTTCGGTGAAAACTT  66 132
 GF1_RS03020  720858 ..  720868 +  -2.4   -4.1711   CGTACCCTGTTACCC                 CTCG TGC CGCG                 TTTCTTCCCCGTCCT  59 49
 GF1_RS03030 NONE
         der NONE
 GF1_RS03040  725662 ..  725682 + -15.5  -3.02144   TCCAAGGAGGAGGGC            GGGTTACCC TCG GGGTAACCC            TGTTGGCAACAATCA  95 123
 GF1_RS03045  727131 ..  727161 +  -6.8  -3.14211   TATACCCCTGCTCCA      GGCTGGGCC-ACT GATCCG GGTTGGCCCCGCC       TTCCTCGCGAAGCCT  54 267
 GF1_RS03070  731399 ..  731424 + -12.6  -5.97575   AAACGGTAGTAGAAA         GCTCCGGACC TCCTGT GGTTCGGAGC          TTTTTTTTCTAAATT 100 32
 GF1_RS03075  732981 ..  733009 +  -4.5  -4.58283   GCTCCGGATGGAGTC        TTCACCGGGCCAG CTC CTGTTTCTGTGAA        TTTTTCAGCCACTTC  70 138
 GF1_RS03080  733837 ..  733851 +  -3.4  -6.01369   AGAATTGGCCTTCTT               CCCTCG TGG CAGGGG               TTTTTTTATTATTTG 100 229
 GF1_RS03085 NONE
         mpl NONE
 GF1_RS03095 NONE
 GF1_RS03100 NONE
 GF1_RS03105 NONE
 GF1_RS03110 NONE
 GF1_RS03115  741352 ..  741382 +  -7.5  -2.54467   AGTTGGGACCGGGAG      TGCTCTGCCGGCGC AGGT GGGCCGGCAG-GAA       ATGTATTGATTTGTG  56 40
 GF1_RS03120  741686 ..  741696 +  -3.2  -3.51934   GACTCCGGAGAGGAG                 CACT GAA GGTG                 TCTTTGTACCGGGCA  49 20
 GF1_RS03125 NONE
 GF1_RS03130  743636 ..  743648 +  -3.3  -4.75289   CCAGGCTTGATCATC                CCGGA CTC TCCAG                TTTTCTGTTATCCTG  71 50
 GF1_RS03140  744666 ..  744677 +  -5.8  -3.20991   GTGATTCCATTTCAT                TCCG GCCA CGGA                 TTCCATTCGATTCCG  54 50
        istA NONE
        istB  747385 ..  747398 +  -8.1  -2.91086   TCGAGGCTGAAACGG               CAGCC GTTT GGCTG                TATCCTCTCTCCTTT  58 311
        istA  749230 ..  749246 +  -2.1   -2.7361   CACCATCACCAAGCG              CCAGGTC AAC GCCCTGC              TCGATTTCTCCTTCA  39 269
 GF1_RS03170  750556 ..  750570 +  -8.5  -3.64703   CTGAAAGTAATCGAA               GGGCG AAAGG CGCCC               TTTCGGTCAGGACCC  69 184
        tilS  752419 ..  752430 +  -5.8  -3.91084   TGTTGCATTACCAAT                CCTG GCTG CAGG                 TTTCCTTCAGGATAA  65 261
 GF1_RS03190  755430 ..  755445 +  -3.2    -3.889   CTTGTAGGAAGGTCC              TGCGGT ATAG ACCACA               TTTCCTGTCCTTAGA  55 200
        istA NONE
        istB  762041 ..  762057 +  -2.2  -4.46926   GGTGGGTCAATTTTT              TTGTCC GGGTG GGTCAA              TTTTGTCGTCCGGTA  63 153
 GF1_RS03225  763211 ..  763230 +    -5  -3.69323   AGTGAGGCCGACACC            TTCAGGCA TCGG TGGCTGAA             TTTCAGTGGTAATCA  55 186
 GF1_RS03230  763704 ..  763729 + -16.9  -4.23207   TGTTTCCCTTCTGCC         GGGGCTGTCAG GTGA CTGGCAGCCCC          TTTGTGTCCTTTTTC 100 118
 GF1_RS03235  764657 ..  764667 +  -8.2  -2.71011   TCCTTATTGGGAGCA                 GCGG ACC CCGC                 TGCTTACGGAAGACT  60 328
 GF1_RS03280 NONE
 GF1_RS03285  776821 ..  776841 +  -9.7   -2.9924   TTCGTTGCCGTAACA            GTCCCCCAT TTC ATGGCGGAC            TGTGTCCATTCTTTA  69 399
 GF1_RS03295  777228 ..  777248 +  -6.2  -3.50715   GACAGCAAAAGGAGG           CCGCATGAA GATT TTCA-GCGG            TTGTATCGCCCTTGT  58 18
 GF1_RS03300 NONE
 GF1_RS03305 NONE
 GF1_RS03310  783169 ..  783180 +  -2.2  -3.44146   GATTCTGATTCATGT                CATC TCGT GGTG                 TTGCTTGTGCCGGGC  47 175
 GF1_RS03315 NONE
 GF1_RS03320 NONE
 GF1_RS03325 NONE
 GF1_RS03330  787691 ..  787717 + -14.6  -3.36452   AATCTGTTTTGACCA         CCCTTTCTTTCA TTC TGAAAGGAAGGG         TTCATCTTGCAAGGT 100 29
 GF1_RS03335  788925 ..  788960 +  -8.4  -4.04157   GATCCGTTATTCCCG   GAGG-CTGGCCGTCTT TCACTT GAG-CGGCCAGTCCTC    TTCATTTTTTCTTCC  77 44
 GF1_RS03350  793332 ..  793349 +  -3.4  -3.95036   TGCTACAGGACGGTT             GGCGTAC TTCTT GT-CGCC             TTGTTTGCGATCGTT  55 43
 GF1_RS03355  794908 ..  794937 +  -2.1  -3.18582   GGCAGCCGATGCACT       GCATGTTGC-CC GGCATGA GGCGCAGCTTGC       TTGGTCGCTGCGATC  44 54
 GF1_RS03400  807959 ..  807969 +  -8.2  -2.90212   CAAGGTTTGAGGCCA                 CCGG TAT CCGG                 TCTCTGCCCTGATCC  61 31
 GF1_RS03405  808853 ..  808883 + -14.1  -5.60993   TTTCTTTTACTGTGA      CAGGTGGCATGGCG GCTG CGCCA-GTCACCTG       TTTTTTTGTACGGGG 100 103
 GF1_RS03430  813570 ..  813584 +  -7.8  -3.34468   ACGTTCGGGCAAACG               GTCGCA GGC TGCGGC               TCTGTTTACTTCGGC  62 40
 GF1_RS03435  814155 ..  814169 +  -5.6  -3.14132   CGCCGCCGATGCTCT               CCTGGG CTG CGCAGG               TTCGTGACACAGACC  52 4
 GF1_RS03440 NONE
 GF1_RS03445  818434 ..  818445 +  -5.8  -4.40692   ACGCCGGCAGGCCTC                TCCG GGGT CGGA                 TTGTTATTTTTTGCG  72 126
 GF1_RS03465  823071 ..  823085 +  -2.1  -5.06052   CGAGGTCCTGCCCAT              CC-TGC CTCT GCACGG               TTTTGTCTTTTTTCC  74 104
        ftsY  826885 ..  826915 + -11.9   -5.1361   CGGCCCTGATTCTCC      TT-GCCACCGGCGG TCTG CCGGCGGTGGCCAA       TTTTTTCGGCTTTCT 100 271
 GF1_RS03490  829241 ..  829297 + -15.9  -3.69605   CACCATGACCCGGAT CACCGGCTCGGTTCCTGACGGCCGCA CCAGGA TGCGGCCC-CGGGAACCGAGCTGCTC TTCCTTTTCCCTGAG 100 182
 GF1_RS03510 NONE
 GF1_RS03515 NONE
 GF1_RS03520  837611 ..  837660 + -11.9   -5.9362   GGACGAGACTTTCAT AAAAAAAGCGGGCCGCGCCGGAT AATT ATCCGGCGCGGCCCGCAGGCTGA TTTTTTTCTGTTTTC 100 105
 GF1_RS03535  840928 ..  840940 +  -6.2  -2.58249   GCCCTTGTCTGTACC                CCGG CAAAA CCGG                ATTGTGAACAATGTC  50 52
 GF1_RS03540  841458 ..  841473 +  -6.2   -5.2894   AAAAAACCCGAAAAA              TAGGTA AATC TACCTA               TTTTCTTTTGTGTTT  93 19
        ltrA  843619 ..  843640 +  -5.9  -4.56597   GGCCGTGCGGGGTTA           AATTTCCGA AAAA TCGGAAATG            TTTTTGGCAAAACCA  74 163
 GF1_RS03550  845227 ..  845248 +  -2.3   -2.7386   TAATATCTCCGCCAA           GGCGA-TC AAGAAAG GAGTCGCC           TGATTCCAGTCCCTT  39 1
 GF1_RS03555  846137 ..  846150 +  -4.5  -4.68908   CTCTCCACAGGCTTC               CTGGT TGTG GCCAG                TTTCTTTTCGATGCC  72 193
 GF1_RS03565  847063 ..  847085 +  -7.7  -6.28631   CTCAGGGAAAAACCG          CCGCT-GGCA GAGA TGCCCGGCGG           TTTTTTTTTAGTTTG 100 74
        ltrA  849141 ..  849185 +   -10  -2.95113   GTACGTACGGTTCTG TGAGAGGGATGAGGCAAGCT TAATT ACCTTGCCTCACCCTACTCG ATTTGCCTTTTAAGC  68 74
 GF1_RS03575  850844 ..  850858 +  -3.5  -3.30124   AAGGGGAAATATTGT               CCTGT ACCTG GCAGG               TTGTCCCCGGTCGAG  49 87
        cysS  852501 ..  852511 +    -4  -2.79183   CAGGGCGACTCTCGA                 CATA CTA TATG                 TATAGTCGAGATCCG  43 80
        amrB  853538 ..  853555 +  -4.7  -2.52464   CAGGTCGTGGGCTAT             GCGGGGC TGGT GATCCGC              TGAGTTGGCCGGCAA  44 5
 GF1_RS03590  854182 ..  854207 + -14.7  -4.54727   AAAAGAATAAAAAAA         GGGACCCGAAC ACCT GTCCGGGTCCC          TTTTAGTTTGCCCGG 100 356
        ltrA  856257 ..  856303 +  -6.5   -5.1861   CGTACGTACGGTTCT GTGAGAGGGATGAGGCAAGCT TAATT ACCTTGCCTCACCCTACTCGA TTTTTTCATGGTGGG  93 73
 GF1_RS03620  861999 ..  862055 +  -6.3  -3.14026   TTTGTGGTCACCGGC AGGGATCTGCAGCTGGGCCACCGCC CGGCAGA GGCGCTGGCTCAGCTGCCTGGCCGA TTCGATATCCGTATC  52 315
 GF1_RS03630 NONE
        nagZ NONE
 GF1_RS03640  866280 ..  866299 +  -2.8  -2.81413   AGCCGGTCAGGACCC            T-GTCCCCG GCG CGGTGACCA            TACTGTTCGTTGATC  41 371
 GF1_RS03650 NONE
 GF1_RS03655  868348 ..  868366 +   -11  -2.62184   TCCGGGGTGACCTGG             TCCTGGAG CAG CTCCGGGA             TGATCTCGCGGCCGC  69 514
        lpxK  877289 ..  877299 +  -2.4  -3.04398   CACAGGAGCAGGGAT                 GTGC GTA GCTC                 GTTTTGGCGAAGAAG  42 128
        lpxC  878472 ..  878494 + -19.2  -6.06723   CCACCTCAGTACCCA           CCGCTGACCG TTC CGGTCAGCGG           TTTTTTTTTGCAGAA 100 49
        proC NONE
 GF1_RS03710  880458 ..  880469 +  -5.8  -3.97947   CGCGTCCTCCAGGGC                CTGG CGTA CCAG                 TTTCTCCTCAATGCC  64 168
        trxA  883413 ..  883440 + -15.6  -5.69379   GCTCTGATCCCCGTG        GTCCGGTTCGGA GTTT TCCGGACCGGGC         TTTTTTTACTTCTGT 100 34
 GF1_RS03730  884261 ..  884275 +  -4.2  -2.69964   CCCAGAGGTAAGGTA               TCATGG TCC CCAAGA               TGATATGGTTGCGGC  43 30
 GF1_RS03735 NONE
 GF1_RS03740 NONE
 GF1_RS03745 NONE
 GF1_RS03750  886475 ..  886485 +  -4.6  -3.96892   CCTGCTATCCATTCC                 GGTC GGC GGCC                 TTTATCATCGGAGTT  60 107
 GF1_RS03755 NONE
 GF1_RS03760  890878 ..  890888 +  -2.4  -5.75478   AAGAGGGACTTTTTG                 GCTC TTG GTGC                 TTTTTTTGTCTGGTT 100 126
 GF1_RS03815 NONE
        fdhD  906288 ..  906314 +  -8.1  -2.75838   CGTTCCTTCGTGTCT        TG-GCCG-GAGGA CCT TCCTCGCGGCTCA        TGCTGTCATTTTAAG  57 94
 GF1_RS03825  907417 ..  907438 +  -8.6  -2.56177   CTGTACCATCACCTG           CCGGGGGC GCTGGA GACCCCGG            GTTACTATCACATGT  59 55
 GF1_RS03830  908333 ..  908362 + -18.7  -4.25104   GATTCATGAGGAAAA       TCCCGTTTTCCGC CCTG GCGGGAAACGGGA        TTTTCATGAAAACCC 100 73
 GF1_RS03835 NONE
 GF1_RS03840  910301 ..  910328 +  -5.6  -3.21595   TTCATGCCACTCCTC        CGCGTCCATGGAT GTG AT-CATGGTCGTG        TTCATCATGGCACTT  51 154
 GF1_RS03895  916234 ..  916244 +  -6.8  -2.71712   AAATATCATGATGCA                 CGGT TCT ACCG                 GTTTCCGGGACAGAA  53 144
        nhaA  918141 ..  918153 +  -3.3  -3.48276   GTCATGGCGCGCGGC                CCGAC GGA GTAGG                TTCTATGACCAGGAC  49 472
        prxU  928022 ..  928043 + -13.7   -5.7946   CTGAAAGTACGAATC           GGCGGTCCA GTGA TGGGCCGCC            TTTTTTTGTTCCACG 100 59
 GF1_RS03985  933924 ..  933963 + -14.5  -4.10657   GCTCACACGGTGTAT CG-G-TAAGCCCATTCCCC GGCC GGGGGATGGGCTTATCTCG  TTTTCAGGGATATGA 100 49
 GF1_RS03990 NONE
         alr NONE
        argS NONE
 GF1_RS04005  937587 ..  937602 +  -3.9  -3.21912   GCGGTATCGGATCGC              CGGGG AATGCA CCCTG               TTGATGGCTTGACCG  47 62
 GF1_RS04010  938148 ..  938162 +  -4.2   -3.6502   CGATTTTTCCGCCGC               CGGTAC CGG GTAACG               TTTAGCTGGCGCCTG  53 13
        secA  940850 ..  940874 +   -15  -5.45726   AATGAAACAAAAAAA         CCCGC-CCGGG GATT CCCGGAGCGGG          TTTTTTTAACCTGTC 100 77
 GF1_RS04045  946415 ..  946454 + -12.8  -4.56597   GCAGTAGATAATACC  CTTGGTATGCATGGCCAG CTTG CAGGCCACGCAGACCAGG   TTTTTCCCGCCGCAG 100 445
 GF1_RS04095 NONE
 GF1_RS04100 NONE
        tnpB  953973 ..  953985 +  -3.4  -5.00616   CGCTATGAATTGGTG                GTGT AAAGC ACAC                TTTTTTGCAGAAAAA  74 20
 GF1_RS04110  955942 ..  955952 +  -3.2  -3.93782   GATCTTTGAAAACGC                 CCTA TCT TGGG                 TTTCATATTCGGTGA  55 361
 GF1_RS04120 NONE
 GF1_RS04125 NONE
 GF1_RS04130  960241 ..  960264 +  -3.8  -4.13945   AACATGCAAGCACCG          ATTGCAGCTT ATCC AAGCCGCAAA           TTTTGCCGTCCGCAT  60 39
 GF1_RS04135 NONE
 GF1_RS04140  961355 ..  961412 + -10.1   -3.1344   TCTATTTTTCACTGC TCCCTGCTGTTTCGCACCT-G-CCTGA CTGATT TTATGACCAGGTGCGAAAGAGCAGGGG GCTTTTTTTGTTTTT  70 115
        argJ NONE
 GF1_RS04155 NONE
 GF1_RS04160  966688 ..  966700 +  -6.9  -2.64872   TCCGGTTCTGGCAGG                GGCTG CGC CGGCC                GTATTCTTGCCTGGA  52 80
 GF1_RS04165 NONE
 GF1_RS04170 NONE
 GF1_RS04175 NONE
 GF1_RS04180 NONE
 GF1_RS04185  971094 ..  971125 + -23.2  -5.47159   CTGGAAGCTGAAAAA      GCCTGCTGACAAGC CATG GCTTGTCAGCAGGC       TTTTTTGTCTTGAAG 100 50
 GF1_RS04195 NONE
 GF1_RS04200  974088 ..  974114 +  -4.5  -2.50816   TCGGCAAGATACGGA        TCT-TCTGACCG GTTA CGGTTAGACGGA         GTTGCTGGCTGACCA  44 18
 GF1_RS04205 NONE
 GF1_RS04210 NONE
 GF1_RS04215 NONE
        yejB NONE
 GF1_RS04225  980704 ..  980722 + -10.2  -2.79183   CGTCATCATACTCCA             GGCTGCCC TGG GGACAGCC             TGTGGTCACGGTGCC  63 497
 GF1_RS04315 1001336 .. 1001353 +  -4.1  -5.49569   GCTCCCGATAGAGAT             CCATGGA TTTT TCCATGC              TTTTTTCTGTTGATG  89 399
        pseB NONE
        pseC 1009665 .. 1009678 +  -5.9  -4.18303   TGGATACTGCCAGCT               GGGGC CGGT GCCTC                TTTATAGTTTGTGCT  66 233
 GF1_RS04535 1045861 .. 1045897 +  -3.5  -5.14965   ATGAAGTCCCGCATG    GCCTCCACGGTCAGGTT CAG GGCCTGTTCCTGGGGGA    TTTTTTCCTGGAGAT  78 377
 GF1_RS04645 NONE
 GF1_RS04650 1066416 .. 1066436 +  -4.6  -3.29591   TAGGTTCAAGACAGA            GGAGCAGG AAGGG CTTGCCCC            TTGAGTTTGCCTGAT  51 38
 GF1_RS04655 1067060 .. 1067092 + -11.3  -5.12916   TCGGCCGAGGATATA      TCCCCTCTTTCCC CCTGGTC GGGCGAGAGGGGA      TTTTGTTATTTTCTG 100 111
 GF1_RS04660 1067815 .. 1067833 +  -4.5  -3.08798   GCCGCGAATCATTTC             GCTGTGC CAGAA GCACAGG             TCTTAAGTAGAGAGT  48 169
 GF1_RS04665 1069882 .. 1069913 +    -3  -3.98991   ATCTTTTCCAGCAGG      GTCGTCCGT-TTC AGGTTGA GAATGCGGGCGGC      TTCCTTTTTGTTTCC  58 144
 GF1_RS04680 1072299 .. 1072323 +  -5.6  -3.85698   GTCCACGTGTCCGTT          CACGGGCATG GGAGG CATGCCCAGG          TTTATCACGCCCGGG  61 198
        nrfD 1077958 .. 1077994 + -18.8  -3.53012   CTGAGGTGAACTGAT   CCGGAACGGGA-GGCGG TCCT CCGCCATCCCGTTCCGA    TTTCCCAGGAACGAA 100 37
 GF1_RS04700 1078654 .. 1078685 + -19.6   -6.0427   CATAATGAAAAAAAA      GCCACTCCGAAG-CC CCT GGACTTCGGAGTGGC      TTTTTTTTATGTGAT 100 213
 GF1_RS04720 1082665 .. 1082697 +  -4.9  -3.15249   TACAATGAATTTTGA     AGTCCGGTTCT-CT GTCAAG GGCAGAACCGGACC      TTCATGAAAAATCTG  49 66
 GF1_RS04725 1083503 .. 1083533 +   -27  -4.13654   CACTCGCCTCATCTT       TCGGGGCAGGACCG TTC CGGTCCTGCCCCGA       TTTGTAGTTTGCCCG 100 110
        ltrA 1085584 .. 1085628 +   -10  -2.96722   GTACGTACGGTTCTG TGAGAGGGATGAGGCAAGCT TAATT ACCTTGCCTCACCCTACTCG ATTTGTACCTGTCAC  68 73
 GF1_RS04735 NONE
        nrfD 1087896 .. 1087909 +  -3.8  -3.13728   CGAACTCGCAGGGAA               GGAG GCAGGA CTCC                TTCCCTGTAACTCCT  47 58
 GF1_RS04745 1088349 .. 1088384 +   -22  -5.88565   CTTCCTTCCTGCCAG    GACAGCTTTCCTGGGC CCCG GCCCCGGAAAGCTGTC     TTTTTTTGTTGTCCC 100 64
 GF1_RS04750 1089672 .. 1089684 +  -3.3  -3.31144   CCGCATAGAGGGTGA                CACCG CTA CGCTG                TTATAGCGGTCAGCC  47 86
        rpsT 1090248 .. 1090273 + -16.3  -5.19879   ATCATTAGGGAAAAA         GCCATGGAAGA CTCC TCTTCCATGGC          TTTTTCTGTTTCCAG 100 67
        trpE NONE
 GF1_RS04765 NONE
        trpD NONE
        trpC NONE
 GF1_RS04780 1095581 .. 1095594 +  -4.5  -3.76413   CCCCGGTCGTTGATG               CGGAC CACG GTCTG                TTTGCCGTTTTCCAG  56 472
 GF1_RS04795 1097572 .. 1097597 +  -9.8  -6.01725   CTCCAGTAAAATCAA         GCACTTAGCG TTTAAT CGTTAAGTGC          TTTTTTGTTTTTATT 100 36
 GF1_RS04800 1098522 .. 1098537 +  -2.6  -2.89271   ACCAGAAAGCTGATA              GGA-AAC AAT GTTATCC              CTTTAGATATTTGTC  41 76
 GF1_RS04805 1099208 .. 1099226 +  -2.3  -4.10466   CCCTTTCCTCAGAAT             GATGGGG CGTGT CCCTTTC             TTGTTGTTGATTTTT  56 53
 GF1_RS04825 NONE
 GF1_RS04830 1104851 .. 1104869 +  -7.3  -4.72497   GCCGGACAAAAAAAA             ACCCCGC CAAAA GCGGGGG             TTTTCTTACTGCCTG  81 167
 GF1_RS04860 NONE
 GF1_RS04865 NONE
 GF1_RS04870 NONE
 GF1_RS04875 NONE
 GF1_RS04880 1115737 .. 1115751 +  -5.6  -3.92869   TCTTTTTTCGGCATG               GTCGAC CTC GTCGCC               TTTCTGCCTGGATGG  63 350
 GF1_RS04905 NONE
 GF1_RS04910 1120718 .. 1120733 +    -6  -4.09685   GGAGGTGGACCTGGC              CCAGGG ACTG CCCGGG               TTTTCCACCGTCGGC  68 103
 GF1_RS04920 NONE
 GF1_RS04925 NONE
 GF1_RS04930 NONE
 GF1_RS04935 1126292 .. 1126302 +  -5.4  -2.56122   TCGAGTGTCATTCCA                 TCGA GAA TCGA                 GATTTTCTGGTCGAC  47 47
 GF1_RS04940 NONE
        nrfD 1128809 .. 1128847 + -12.4   -6.2845   TCTGCAAGGCCGGAC  GCCCCTGTCTCCGCTCC CATTCC GGGGCCGGG-CAGGGGC   TTTTTTTTTCTGATT 100 56
        ltrA 1131019 .. 1131038 +  -2.8  -3.69323   AGTGAGGCCGACACC            TTCGGGCA TCGG TGGCTGAA             TTTCAGTGGTAATCA  51 281
 GF1_RS04955 NONE
 GF1_RS04960 NONE
 GF1_RS04965 1136738 .. 1136749 +  -7.2   -3.3452   AGAAAACAGCAAAGA                CCCG GCTC CGGG                 TTGTCAAATAGTCTG  59 3
 GF1_RS04970 NONE
        ptsP NONE
        thiL NONE
 GF1_RS04985 NONE
 GF1_RS04990 NONE
 GF1_RS04995 NONE
 GF1_RS05000 1145637 .. 1145653 +  -2.2  -5.54907   CTTTTACCTTTGTAA              CTCACT GAAAG AGCGAG              TTTTTGTTTTCTGGA  88 173
 GF1_RS05005 NONE
 GF1_RS05010 NONE
 GF1_RS05015 NONE
 GF1_RS05020 1150203 .. 1150219 +  -8.1  -4.16842   AGTGTTGTCCGGTCT              CAAACAT GAA ATGTTTG              TTTATTGAAACTGGC  76 170
 GF1_RS05025 NONE
 GF1_RS05030 1152023 .. 1152058 + -14.7  -3.12319   TTTCAGGCACCACTT    TTCGGGGAGACGGGC ATCATG GCCCGTCTCCCCAAC     CTTTGCTTGTTTTGT  93 67
 GF1_RS05035 NONE
 GF1_RS05040 1154700 .. 1154726 +  -9.5  -5.52384   CCGGGCGCTGACGAT        CAGGGGACAGGT TTCG GCCTGTC-CCTG         TTTTTTTGATGGACA 100 61
 GF1_RS05045 1155546 .. 1155565 +  -3.6  -5.47846   GCTGAAAAAACATGG            TTCTGT-CC CGG GGCACGGAA            TTTTGTTTTTTGATT  93 132
 GF1_RS05050 1156240 .. 1156250 +  -4.6  -3.90744   CGCTGCAGGACACCC                 GCTG AAT CGGC                 TTCTTTGCCGCAGAC  60 21
 GF1_RS05055 1157249 .. 1157264 +  -2.4  -3.64103   CGCTCCGGATGAGTT              CCGGGC TGGT GCTGGG               TTTACAATATGACTG  49 65
 GF1_RS05060 1158173 .. 1158188 +  -2.5  -4.77157   ACAGGCTGTCACTGC              GACGG TGCCTT CTGTC               TTTTTCGTGCCTTAC  68 110
        mlaD NONE
 GF1_RS05070 NONE
 GF1_RS05075 NONE
 GF1_RS05080 1160665 .. 1160678 +  -2.4  -4.59069   ACCGACTTTCCATGG               TCCT CTGAAC AGGA                TTTTCTGGTTCTCCT  66 18
 GF1_RS05085 NONE
        rpmF NONE
        plsX NONE
 GF1_RS05100 NONE
 GF1_RS05105 NONE
 GF1_RS05110 1165621 .. 1165633 +  -3.3  -4.15669   CGCTCGGTGCTGTAA                CTGGG GCG CCTGG                TTTGATTTCTGACTT  60 26
 GF1_RS05115 NONE
        fabG 1167614 .. 1167635 +  -8.7  -2.62263   TGGGAAATTGATTCA           TGGGTCCTG TGCG CGGGACTCA            TGCTGTAGCCAAGGT  59 30
        acpP NONE
 GF1_RS05130 NONE
        fabF NONE
        rpiB 1169686 .. 1169717 +   -10  -4.67038   AGACAGTGAATGTAT      GACCGGCAGCCCTG GAGA CTCGACTGCCGGTC       TTTTGCTTTTAAGGA  95 58
        nrdR NONE
        ribD 1173019 .. 1173035 +  -2.9  -4.45259   GTCCGGTTCTCACCC              TGCCTGG TCT TCAGCCA              TTATTTTTCCGATTT  65 289
 GF1_RS05180 1177511 .. 1177549 + -17.5  -4.62471   AGTAGATCAGTATCC  GCCAAGGGTCCCTGCTGG AGAA CCGGCAGGGACCCT-GTC   TTTTTCCCGGTTCCG 100 92
 GF1_RS05200 NONE
 GF1_RS05205 1181852 .. 1181863 +  -4.4  -3.39564   AGTCCCTTTGCCGAA                GTTC TGCG GAAC                 TGATTTTTCCTTTTT  51 11
       coaBC 1183486 .. 1183504 +    -3   -3.7732   CACCAGGACGTGGGC             CGCGTCGC GAA GTGACATG             TTGTTGGTGTCGCCA  52 361
 GF1_RS05220 NONE
 GF1_RS05225 1185834 .. 1185853 +    -5  -3.69323   AGTGAGGCCGACACC            TTCATCCA TCGG TGGCTGAA             TTTCAGTGGTAATCA  55 264
        tolQ 1192229 .. 1192285 +  -2.3  -3.17051   GAAACTGCAGGGGGT TGATG-GCTGAAATCAACGTGACGCCG CTGGT CGACGTCATGCTGGTG-CTGCTCATCA TCTTCATGGTGACCG  43 87
        tolR NONE
 GF1_RS05255 NONE
        tolB NONE
 GF1_RS05265 1196027 .. 1196045 +  -4.4  -2.78384   GTAGGATAGCCTTCG             GCAGCACG GAG CGTGCGGG             TATGGTACAAAAGAC  46 37
 GF1_RS05270 1196994 .. 1197007 +  -3.7  -4.46212   CACCCTGGCAACACC               ACGCC CCGG GGCGA                TTTTCTGATAAACGA  67 181
 GF1_RS05275 1197709 .. 1197727 +    -3  -4.08767   GGTCTGCGGGCCTTC             CACGAGCC GGT GGATCGTA             TTTTCGAACCGTACC  58 123
 GF1_RS05295 1202769 .. 1202782 +  -6.7  -3.72576   GGTTCGTGACCGGGA               GACCA TCGA TGGTC                TTTCCTGCAAAACAG  66 178
 GF1_RS05300 1203739 .. 1203753 +  -4.2  -3.34192   AGAGCGGAGCACATG               GTGAGC GTA GCTCAG               TTGGTTAGAGCACTT  49 84
 GF1_RS05305 1203830 .. 1203859 + -13.6  -5.37593   ACAAAGAATGAAAAA       GGTGCTGCAGTC CAAAGC GACGGCAGCACC        TTTTTTGGTTTCAAG 100 40
 GF1_RS05330 1207813 .. 1207843 +  -3.1  -2.54314   AAGGAGAGAAGTGAG       GGTGCATGCAGCC CTGGA GGCTGAGCTCACC       GGTTTGTTATCTGTG  40 27
 GF1_RS05335 NONE
 GF1_RS05340 NONE
 GF1_RS05345 NONE
 GF1_RS05350 1212016 .. 1212052 +  -2.2  -6.09888   GAATCGGGCAACAGA    AGACAAAAAACCTGGA CTGGC TCCAGGATTATTGACG    TTTTTTTTGTTCAGA 100 103
 GF1_RS05355 1214114 .. 1214126 +  -5.5  -3.53012   GGGTTTATCTTTCGC                CCTGT CCG GCAGG                TTTCGAAGGAGAAGA  56 66
 GF1_RS05360 NONE
 GF1_RS05365 1217014 .. 1217040 + -14.4  -5.47399   TTCATACCCTCCTTC         CGGCGGGAGACG TCC TGTCTCCCGCCA         TTTTTTTCCGCTTCC 100 134
 GF1_RS05385 NONE
 GF1_RS05390 1222807 .. 1222824 + -10.5  -3.02144   ATCATGAGGGCAAGA             CGCGCCT GCTG GGGCGCG              TCTTGCCCAGGATCA  72 42
 GF1_RS05395 NONE
 GF1_RS05400 1226206 .. 1226233 +  -8.3   -2.8934   ATAACCCCTGCACTG        GCCCGCCGCAG TCGTCC CTGCCGGGGGC         TGTGATCCTTTCAGG  61 90
 GF1_RS05405 1227619 .. 1227646 + -20.6  -3.36273   TGATTCGCTATCCTG        TGGCTGGCCCGG TTTT CCGGGCCAGCCG         TTCCTCTTGAGAACA 100 64
 GF1_RS05410 NONE
 GF1_RS05415 1229726 .. 1229758 + -22.2  -4.58395   ACCGCCTGCGGCTTG      TTCTGCGGATCGGG TCTGC CCCGATCCGCAGAA      TTTTTCAAACCTGAA 100 46
 GF1_RS05420 1230969 .. 1230995 +    -3  -5.05601   GGCTCCCTGTATTCT         AAGAAAAAAGGG CGG CCTTGTTTTCTG         TTTTTGTCTCTGGTG  77 515
 GF1_RS05430 NONE
 GF1_RS05435 1235464 .. 1235474 +  -6.8  -2.69471   TGATACGCTGCCTTG                 CTCC TTT GGAG                 ATTCTCTGCCAATAA  50 242
        proV 1239203 .. 1239219 +    -3  -3.57792   TGAAGAGCAAGTTAT             CCC-TCT TGAC AGATGGG              TTTCGCAGTCGGTGG  51 67
 GF1_RS05450 NONE
        proX 1241140 .. 1241176 + -14.5  -6.28631   TAGCCATCCTCCCCG    GAGAGCCTGGCTCTTTT TCC ATGAGAGCCGGGTTCTC    TTTTTTTTTGCTTTC 100 45
 GF1_RS05460 1241973 .. 1241983 +  -5.4   -4.0828   AGAGGTGCTCCGGCA                 GGTT CGC AACC                 TTTCCTGTTTTCGGT  65 173
 GF1_RS05465 1242487 .. 1242507 +  -5.3  -3.87373   GTACAGGAGTAGTCA            GTCATGCAG ATC CTGCCTGTC            TTTATCACCGATCTG  63 29
 GF1_RS05470 1243820 .. 1243847 +  -3.3  -3.87815   CGTGAAACAGGGGCC        TGCTCTTGTGG CTGACA CCACAGGCGCC         TTTGTGCAGGTACAG  55 105
 GF1_RS05485 1247061 .. 1247090 + -15.7  -5.60993   TGAAAGAGTTGTCCG       GGCGAAGCGCGGT TTCT GCCGCTCTTCGCC        TTTTTTTATAAAAAA 100 65
 GF1_RS05490 NONE
 GF1_RS05495 NONE
 GF1_RS05500 1250016 .. 1250047 + -17.4  -5.82316   CTGGCAGGCCGATAA      CAGGCCACCTGATA TGCA TGTCGGGTGGCCTG       TTTTTTTTACATAAT 100 72
 GF1_RS05510 1251677 .. 1251716 + -15.9  -5.32699   TTATTGCTTCTCTCC  CTCTTTTCCCGGGCC AGTCCGTTTC GGTCCGGGAAAAGAG   TTTTTTAATCTTTCC 100 75
 GF1_RS05515 1253069 .. 1253085 +  -4.3  -3.57462   CCTGTGAGGCCGCAG              TAGCCCC CGT GGGCCTG              TTTCGCGGTACGCTG  51 380
 GF1_RS05545 NONE
 GF1_RS05550 1260146 .. 1260165 +    -5  -3.69323   AGTGAGGTCGACACC            TTCATCCA TCGG TGGCTGAA             TTTCAGTGGTAATCA  55 158
 GF1_RS05555 1261822 .. 1261851 + -14.3  -6.06723   CTGCTGTCCTGTAGA       TCCGCGTCATGGC GAGT GCTGTGGCGCGGA        TTTTTTTTTGCCGGC 100 286
        thiC 1263279 .. 1263312 + -14.5  -3.48276   GGCTGAAAAGAGAAA     GCCTGTCCAGCCAGG GCAT TCAGGCCGGACAGGC      TTGTGTCAGCAAGAG 100 72
 GF1_RS05570 1266225 .. 1266255 + -11.2  -2.98942   ATGACGACAGGGAGA      C-GCGCCGGC-ACC GACCG GGTTGCCGGCGCCG      TATCTATCAGGCCGT  72 152
 GF1_RS05590 1271033 .. 1271049 +  -4.4  -2.70717   AGGCCGGGTTTCAAA              TGGGGA TGAAT TCCTCA              TGGCTTTGGTCTATT  46 52
 GF1_RS05595 NONE
        trpB 1274100 .. 1274123 +  -4.5  -3.62096   AGACAGGAGCTGATC          CGGCCCG CCGGCTGACC CGGGCTG           TTTCCGGTGGTGACG  55 28
        trpA 1275010 .. 1275024 +  -3.4  -4.45765   GATCCTGAATGGGCG               CTGGCC AGG GGGCGG               TTTATTCCTTTTCCA  65 58
 GF1_RS05620 1279792 .. 1279805 +  -2.3  -3.70039   AGCCGATGAAAAACA               GCAGG TCGC CCTGG                TTCATTTTCAGGTTT  51 468
 GF1_RS05640 1283891 .. 1283920 + -15.1  -3.76952   AAAGAAAAAACAAAA       CAGGGCCATCC CGTCAGGA GGATGGCCCTG        TTTGCATTCACTGAG 100 325
 GF1_RS05715 NONE
 GF1_RS05720 1300844 .. 1300856 +  -4.8  -5.04356   TCCGGTTGATCCCCA                GCAG GGTGG CTGC                TTTTTGCTTGTTTCC  83 106
 GF1_RS05790 1315169 .. 1315182 +  -2.3  -2.59055   GCAACAATCGCTTCG               TCCGT AATA ACGGC                ATTGTCCGGCGTTTC  38 474
 GF1_RS05860 1327378 .. 1327390 +  -3.3  -3.88232   GCCCCGAGGCAAAGG                CCAGC TCC GCTGA                TTCTTCTATGAGGCG  55 194
 GF1_RS05885 NONE
         tig 1332483 .. 1332499 +  -8.7  -3.55071   TAAAGAAAATATCAG              TCAGGCC GGC GGTCTGA              TTTCGAGGAGTATGA  67 297
        clpP NONE
        clpX 1334636 .. 1334652 +  -5.8  -2.54896   CTGCTGGGTGTATAC              CCGGAG TCTCC CTTCGG              TCGCTTACCTGCGCG  50 269
         lon 1337152 .. 1337162 +  -2.4  -2.84518   TAATTGGCAGGAGTT                 GACC CGG GGGC                 GCTTTTTTCCTTGAC  41 52
 GF1_RS05910 NONE
 GF1_RS05915 1337386 .. 1337412 +   -16   -5.3658   CCGCCAGTATAATCA         GGGACTTAGCCA ATT TGGTTAAGTCCC         TTTTCTTTTTCTGGT 100 35
 GF1_RS05975 NONE
 GF1_RS05980 1348824 .. 1348850 + -17.4  -5.46698   CCGCCAGTATATCCA         GGGACTCAGTCA GTA TGGCTGAGTCCC         TTTTTTCGTTTTGCG 100 199
 GF1_RS05985 1349728 .. 1349745 + -12.7  -4.38712   GCCATGTTGAACAAC             TCCGGCC AGCC GGCCGGA              TTTTATCAGACTCCA 100 481
 GF1_RS05995 1352002 .. 1352015 +  -5.9  -3.79747   GGGTTTGGACTGCCC               GGGCT TCAT GGCCC                TTTGATGGTAACTGG  63 48
 GF1_RS06000 NONE
 GF1_RS06005 1353014 .. 1353037 + -18.2  -6.23317   CAAGTGACAAAAAAA          GCCCGGTCGA GCAA TCGACCGGGC           TTTTTTTCTTTTTCT 100 57
 GF1_RS06030 1359607 .. 1359645 +  -6.7     -2.59   GAGCAGGATCTATCC  TCTCGCAGATACAGGGCC TCCG GGCCCTGCATAAG-GAGA   CTGTTATGTGGAAAT  52 52
 GF1_RS06035 NONE
 GF1_RS06040 1361102 .. 1361136 + -13.5  -3.15638   TAACCCGGGTCCTGC    TCCCGGTCCTGGCGCC AGCC GGCACCGGG-CCGGGG     TTGGATCTGAATTTT  85 45
 GF1_RS06045 1361466 .. 1361486 +  -5.3  -5.27335   GGGAGTAACCTTAAA            TCAGCCAGG TAG CCTGCCGGA            TTTTTGTTTGGCAAA  88 33
 GF1_RS06050 1361918 .. 1361934 +  -5.8  -2.54896   TTCGAGCTCGCTTAC              CCGGAG TCTCC CTTCGG              TCGCTTACCTGAGCC  50 153
 GF1_RS06055 1362574 .. 1362619 +    -4  -6.06723   CATTCTCCTACCTCT CCCA-GCGCCTGCAGGG TTTCTTCCTCCTT CCCTGCAGGCGCATCTG TTTTTTTTTACGCCC 100 49
        rfbB NONE
        rfbC 1364568 .. 1364580 +  -9.1  -3.29461   CTGTCAGGGCCATTC                CACCC GCA GGGTG                TTGTCGCGGGCATTG  69 181
         era 1367733 .. 1367757 +  -3.6  -3.18321   AGGTTGCGACGCAAG         GCTTTTAGCGG ATGC CCGG-AAAAGC          TGTTGACTTATAAGT  47 131
 GF1_RS06080 NONE
 GF1_RS06085 NONE
 GF1_RS06090 NONE
 GF1_RS06095 NONE
 GF1_RS06100 1372942 .. 1372958 +  -4.4  -4.56597   GGATAATGGTCTGAT              CAGAGG TGAGT CCTTTG              TTTTTGAGGACAGAG  72 472
 GF1_RS06110 1374935 .. 1374951 +  -2.2   -4.0162   AACCCCAGGCAAGAA              TGGGAG ATAGA CTCCTG              TTTCTGATATCACGC  56 166
 GF1_RS06120 1377749 .. 1377765 +  -5.1  -2.52464   AATCGGTTCTCGGAC              TTCCAGA TGA TCTGGTA              TACCTTCGCGAAACC  47 146
        istA NONE
        istB 1380183 .. 1380210 +  -2.6  -3.11687   CCACCTGAAAGTGGC        TCGATTAACCCG ATCA TGGGTGGCTCGA         TTAGGTGATCATTAA  42 64
 GF1_RS06135 1381135 .. 1381145 +  -5.4  -4.62069   GGACAACCCTACAGG                 GACA CTC TGTC                 TTTTTGCCATGCGGA  75 220
 GF1_RS06140 NONE
        tnpB 1382264 .. 1382276 +  -3.4  -5.00616   CGCTATGAATTGGTG                GTGT AAAGC ACAC                TTTTTTGCAGAAAAA  74 20
 GF1_RS06150 1383971 .. 1383987 +  -6.5  -4.15106   GGTAATCAACTCAGA              CCGCAAA ATA TTGGCGG              TTTTCCGAATTAATC  70 99
 GF1_RS06155 1385102 .. 1385154 + -19.1  -3.14463   AAAATGGCGGTTCAA GCCTGGCCAGTAATGGAGGGAGCCC TAC GGGCGACCGGAATTACTGGCCAGGC TTGGTGGCCGCAGTT 100 41
 GF1_RS06170 1387975 .. 1387986 +    -3  -2.54387   AATGTTAAATTTTTC                TTGA CATA TCAA                 TGAGTTAGCGATTTC  40 104
 GF1_RS06175 1389541 .. 1389572 +  -2.2  -4.00756   AAATACTGCAAATAT      GTCGACAGGAAGAG CTGG TTTTACCTCTCGGC       TTGTTTCCTCGACTG  56 155
 GF1_RS06180 1390504 .. 1390518 +  -2.8  -4.60797   ATCAGGCAAGTGTTG               GATCAA AAA TAGATC               TTTTATCTGTACCAG  68 14
 GF1_RS06190 NONE
 GF1_RS06195 NONE
 GF1_RS06200 NONE
 GF1_RS06205 1395585 .. 1395597 +  -4.8  -4.15044   TGCGGTCGATGGTGG                CTGC ACCCA GCAG                TTTGTTGGGAAAGGC  64 223
        ltrA 1400541 .. 1400562 +  -4.3    -3.794   TCCTCAACAGTCCAG           CGGTCCAGG CTTG CCTGGACGA            TTTCATCGGTTGACC  57 507
        istA NONE
        istB 1406026 .. 1406042 +  -2.2  -4.46926   GGTGGGTCAATTTTT              TTGTCC GGGTG GGTCAA              TTTTGTCGTCCGGTA  63 153
 GF1_RS06280 1413295 .. 1413333 + -22.6  -3.13403   CAGTAAAGGTCAAAG   AAGAAGGCCCTGCCATCT CTG GGATGGCAGGGCCTTCTG   TGTTGGTCAGAGAAA 100 55
 GF1_RS06310 NONE
 GF1_RS06315 1421339 .. 1421355 +  -3.5  -4.66953   GGATAAAGGCGGACG              CGCCCAG GGC CAGGGCC              TTTTTCACCTCTTCA  69 137
 GF1_RS06345 1430934 .. 1430949 +  -6.8  -3.62046   CAGGAAACTGCCCAC              CACCGG GTAT CTGGTG               TTGTTCAGGGCATAG  60 409
        fusA NONE
 GF1_RS06360 1435069 .. 1435097 + -18.2  -5.22312   AAAAGAAAGAAAAAA        GCCCTGGTCCGG AGTAA CCGGATCAGGGC        TTTTTTCGTGTCGCT 100 70
 GF1_RS06370 1436593 .. 1436611 +    -3   -4.4767   TTCCGGCCTGCTTGG             GTGACAGC CCT GCTCTCCC             TTTTGTCCTCGGTCC  65 22
        mgtE NONE
 GF1_RS06380 1439347 .. 1439388 + -18.2  -5.75342   TGGGTGAAAGAAAAA GCCGCCGGTCCGGGGTGATCA TTG TGATC-CCC-GG-CCGGCGGC TTTTTTTTCGCACGG 100 104
 GF1_RS06390 1442535 .. 1442548 +  -2.3  -2.87683   GTTCAATATGTTGCC               CTGAC AGAT GACAG                TGTGTACGACAATAT  41 54
         fbp 1443672 .. 1443694 + -13.4  -3.83632   CCCGGGTTTTTCAGG           CTGGGCCGGT GGA ACCGGGCCAG           TGTTTCTCTTTGTTT 100 83
        dctP 1444889 .. 1444902 +  -6.7  -6.34424   GCGGATCTGGTTTTC               GATCC TGAT GGATC                TTTTTTTTTTGGCAC 100 102
 GF1_RS06405 NONE
 GF1_RS06410 NONE
 GF1_RS06415 1448126 .. 1448138 +  -3.3  -2.84644   TGGTTTTACAGGAGT                GCGCA CGA TGAGC                CGTTTTCTTTTATTT  42 186
 GF1_RS06420 1449297 .. 1449311 +  -6.4  -3.57901   GGGACTGAACTCCCT               GGTCTC GTT GAGATC               TATCTTTTTCATGAA  58 482
 GF1_RS06445 1454270 .. 1454301 + -10.8  -2.84325   TGGTTTTGTCGATGG      ACGGGTGCCAC-CGC AGA GCGGGTGGCACCAGG      TAGTGTTTGGGGCCG  71 146
 GF1_RS06450 1454905 .. 1454925 +  -8.3  -2.52676   TCGGCTGGTTGGCGA            CCAGGGT CATCTCC ACCCTGG            TACGTTCCGCCGCTC  53 402
 GF1_RS06460 1455686 .. 1455721 +  -9.6  -2.78695   CTGTAATCAGTTACA    CATAAACAGGCCGGAC TGCT GCCCGGCCTGAGTGTG     ATTCCTTTCTCTGGC  63 259
        serA 1461256 .. 1461266 +  -2.4  -3.57462   CCCTACGGGGGATAA                 GGCC AGA GCCC                 TTTCCGGGTGACCTA  49 26
 GF1_RS06480 NONE
        ispE NONE
 GF1_RS06490 1462673 .. 1462683 +  -2.4  -2.90754   GCAGGTTCGAATCCT                 GCCG CCC CAGC                 CATTTTTCTTTTGAG  41 13
 GF1_RS06495 NONE
 GF1_RS06500 1464373 .. 1464397 + -16.5  -4.36127   TTTTAGTTGAGTACA          GAGCCGGGAAT TTT GTTCCCGGCTC          TTTTGCGTTGTTCCC 100 90
         pth 1465279 .. 1465293 +  -4.3  -3.13376   TATAGTTATATTTTA               TACGA GTCTG TCGTA               TGCTTTCTTGCGTTT  49 156
 GF1_RS06510 NONE
 GF1_RS06515 NONE
        coaE 1467448 .. 1467461 +  -6.7  -5.75342   TGCCAGGCAAAAAAC               CGGAT TCTG ATCCG                TTTTTTTTAAAAGAA 100 16
         rho 1469368 .. 1469378 +    -4  -3.31144   TAGCAGTTTTCAAAA                 CAAT TAT ATTG                 TTGTCCAGGTCAGGC  49 82
        rpmE 1469659 .. 1469689 + -11.2  -5.43553   CCCGCAGTCCAAAGA       CCCGTGTGATGC CTGTGGT GTGTCACACGGG       TTTTGTTTTTTCCGT 100 41
        prfA NONE
        prmC 1471834 .. 1471846 +  -4.9  -3.18582   ACGGTTAACAACCCT                TACAA CGC TTGTA                TTAATGGATAAAATA  49 33
        murA 1473505 .. 1473515 +  -6.8  -3.22894   TCCAGCTCTATCTGC                 CAGG CGG CCTG                 TTCGTCGCTGTTCTG  56 397
 GF1_RS06565 1478567 .. 1478605 +    -6   -3.7732   CTCCGCGTTACCCCG  CC-TGAT-CTGCCCGGCG CACTC CGCCGGGCTCCATCATGG  TTGTTAATCTCCGAA  63 100
 GF1_RS06570 1479752 .. 1479764 +  -9.1  -2.56596   TCGTTTGCCGGTTGC                GACCG TCA CGGTC                TGGATTCGTAAGAGA  62 128
 GF1_RS06575 1480742 .. 1480779 + -14.2  -5.67063   CTTTTCGGCTGAAAG   CAGGGTGCCTGTGGGG AAATGA CCCCATAGGCACCTTA    TTTTTTTCTGCTGCA 100 99
 GF1_RS06605 1485761 .. 1485797 + -14.5  -5.74122   TTCATGTGGGGATTT    AAGGTGTTTCCGGAGAG TTA CTTTCCGGGAGCACCTA    TTTTTTTGTCTGCTG 100 168
 GF1_RS06620 NONE
        hslV NONE
        hslU NONE
 GF1_RS06635 1491733 .. 1491757 +  -2.7  -4.19258   TCTGTTTCGGGTAGC          CAGGGCGCC TCTTTCC GGCCGCCTG          TTTTCGGTCAGGTAT  60 27
 GF1_RS06640 1492779 .. 1492812 + -11.8  -4.44608   TTTGTCCCACCGCTC     TGGACCGCCAGGG GATTGCTAA CCC-GGCGGTCCA     TTCTTTTTCCCTGAC 100 53
 GF1_RS06680 1500175 .. 1500192 +  -4.1  -4.20696   TTATCAGGTAAGGAT             GAAAGTG GATT CACTATC              TTTTCAAATTGGTGC  62 73
 GF1_RS06695 1505057 .. 1505073 +    -3  -4.84359   ATTGGTTGCAATGCA              CTGTTG AGTAG TAACAG              TTTTTATCAGGCTAC  71 496
 GF1_RS06760 NONE
 GF1_RS06765 1523787 .. 1523812 +  -9.7  -4.08974   TTTTTTATTTTCCCA         CGGTGGGTC TTGCGATC GACCCGCCG          TTTCTGTGATCCCCT  78 62
 GF1_RS06780 1527413 .. 1527443 + -19.1  -5.74122   CAGAAAGAAAAAAAA       GACGCGACAGCCG CTATC TGGCTGTCGCGTC       TTTTTTTATGTCCTC 100 59
        hisI NONE
        hisG 1548056 .. 1548069 +  -2.3  -2.82681   CTGAATGCATCTGCC               TGCAG GAAA CAGCA                TATAATGGACTTTTC  39 37
        yihA 1548868 .. 1548891 +  -5.2  -3.60865   TCGCGGCCCTGCTGG          GAGGTCATGC AGGA GCTTGACGTC           TTCTCGTTTAACATC  58 232
 GF1_RS06885 1549171 .. 1549211 +   -12  -4.65895   TATTCTGACTGGAGA GTTCG-GTGTCATCGGC-GG TCA CCAGCCGATGACCTGCGAAC TTTTTCCGTAAAAGC 100 152
 GF1_RS06895 NONE
 GF1_RS06900 NONE
 GF1_RS06905 1555033 .. 1555045 +  -6.9  -4.00868   TCCTTGATGGGTACT                GCCGG CTA TCGGC                TTTAGTTCTGGCTCA  70 34
        greA 1555807 .. 1555823 +  -8.1  -4.71828   CGATACCGGGCAGGA              TGTCTTT GCG AAAGACA              TTTTCTTCCTGCCCT  87 208
        purD NONE
 GF1_RS06925 1559233 .. 1559248 +  -7.6  -3.07994   GAATCGGGACTTTCA              GAAACC TGAT GGTTTC               TTGAATCAACTTAAG  59 150
 GF1_RS06930 1559949 .. 1559964 +  -4.6  -4.56597   TCGCCACGTTCCTGA              GCTGAC CTGC GACAGC               TTTTTCAAACCGGGC  72 372
 GF1_RS06945 1561610 .. 1561652 + -11.3  -3.12471   GTCTTTATCTACAGC TGAGCTGCCGGGAGGAA-AG AATC CTATTCCACCCGGCAGCAGA TCTCTTCGAGTTTCT  75 23
        galU 1566717 .. 1566728 +  -5.8  -3.57908   ACCGGAAGGGTTGCA                CGCT CCGG AGCG                 TTCTCATGTTTCCTG  60 172
        priA 1569610 .. 1569641 +  -5.8  -2.78384   GGTGAAAAAAAGAGA      CCCGGCAGGA AAAGGAGGGGAA ACCTGCCGGG       TCTGATAAGGAGGAG  51 169
 GF1_RS06965 1572132 .. 1572144 +  -9.1  -3.86897   GCTGGCGAATCTGGT                CCAGC CAT GCTGG                TTTGTGGAGAATCCA  78 373
 GF1_RS06975 1572894 .. 1572921 +  -4.1  -4.62069   GGGCATGAGCCACTG        CA-ACCCGGCTT CGTGC AGGCCGGGGATG        TTTTTCCGGTGAAGA  70 82
 GF1_RS06980 NONE
 GF1_RS06985 NONE
 GF1_RS06990 NONE
 GF1_RS06995 1575458 .. 1575470 +  -3.3  -5.18355   CGGTGGGGCCTCCGG                CGGCT GGT AGCCA                TTTTTCGTTTTTCCG  82 16
 GF1_RS07000 1576494 .. 1576519 +  -4.5  -3.03771   CCTCTTCGCCGCAGG         CCACGGCCACC GGCC GGTAGCCCAGG          TGTTCGAGCATGTGA  47 348
 GF1_RS07015 NONE
 GF1_RS07020 1584398 .. 1584428 +  -3.1  -4.08064   TTGCACCCCTGGAAA       ACAAGCCGGAGAG CGGAT CGTTCCGGCCTGG       TTTTGCCCCCCGATT  58 81
        folD 1585609 .. 1585629 + -16.1  -3.74615   CTGGCAGGATGACAT            GGGGCCGGC TCT GCCGGCCTC            TTGTGTATATTTCTC 100 45
        cooS 1587693 .. 1587709 +  -3.7  -4.72729   CGGGTTGTGGATCCG              GAGCT CACTGAC AGCTC              TTTTGGTTTTGGTTA  70 15
 GF1_RS07045 NONE
        acsB 1592899 .. 1592929 +  -5.5   -2.8619   CGGACGCCCATGATA      TGCTGATGCAGGAC CGCT GTCCTGCAT-GGAA       TGTGATAGATTTTGA  49 85
        acsC 1594446 .. 1594479 + -15.3  -2.62396   GCGGTGGACAGGTTG     CCGCCACCCGGGGACA GCG TGCCCCC-GGTGGTGG     TCCTGTACCCCACTC  95 112
 GF1_RS07060 NONE
        fdhF NONE
 GF1_RS07070 NONE
 GF1_RS07075 NONE
 GF1_RS07080 1602601 .. 1602630 + -16.6  -5.71712   ACTATTTGGCCCCAC       GCCCTGGTTTTC TACTGT GAAAACCAGGGC        TTTTTTTATGTCAAG 100 54
 GF1_RS07085 1603085 .. 1603118 + -15.3  -3.39955   GGGCTGATTAAGAGA     GGCAGGGTGGCAGCA ATAA TGCTGACACCCTGCA      TTAACTTTTAGATTT 100 30
 GF1_RS07095 1605560 .. 1605571 +  -2.2  -4.07568   ACGATCCCGATGGCT                TACC CGGC GGTG                 TTTTGGCCGGACCGG  56 381
 GF1_RS07115 NONE
 GF1_RS07120 1610908 .. 1610924 +  -3.6  -2.73771   GGACCAGGTAAGCGA              CCGAAG GGAGA CTCCGG              GTTTCGGCACTGTCC  43 166
 GF1_RS07125 NONE
 GF1_RS07130 1613989 .. 1614005 +  -2.9   -4.4078   TGGCCTTTATCCCCA              TGACGAT CAT GTCGACA              TTTTCCTTGACCGCA  64 201
 GF1_RS07150 NONE
 GF1_RS07155 NONE
 GF1_RS07160 NONE
 GF1_RS07165 NONE
 GF1_RS07170 1621550 .. 1621590 + -19.7  -4.56775   CCTGTCTTTTCTCTG  CCTGGGTCCCGGGACCGAT TTC GTCGCCTCCGGGACCCAGG  TTTTTCCAGCCCCGT 100 43
 GF1_RS07175 1623131 .. 1623157 +   -10  -2.76696   ACAGTGAGTACGACC         CCGTCCGGCGGG CTG CCGGCCTGATGG         ATTCTTCAGAAAACA  67 224
 GF1_RS07180 1624597 .. 1624608 +    -3  -5.09895   GATCCGCTGCCGTTT                TTTC ATGG GAAA                 TTTTTTGCATGCCTC  78 342
 GF1_RS07205 1630045 .. 1630056 +  -2.2  -3.74693   TTCGGCAAGAGCTGG                GACG TGCA TGTC                 TTTGATGCCCTGCGC  51 372
 GF1_RS07215 NONE
        miaA 1633265 .. 1633277 +  -4.1  -4.07885   GGCCGGGAGTCGGAC                CTGCT CAT AGTAG                TTTTGAAGCGGGGTA  60 497
        ltrA 1634968 .. 1634987 +    -5  -3.69323   AGTGAGGCCGACACC            TTCAGGCA TCGG TGGCTGAA             TTTCAGTGGTAATCA  55 281
        recJ 1636920 .. 1636935 +  -3.2  -3.18024   CTCGAAACCGTTGCA              GGGC CACCTGGA GCCC               ATTTTCCTGCTGGAC  45 114
        purB NONE
 GF1_RS07240 NONE
        miaB 1640342 .. 1640361 +    -5  -3.69323   AGTGAGGCCGACACC            TTCAGGCA TCGG TGGCTGAA             TTTCAGTGGTAATCA  55 170
 GF1_RS07250 1641272 .. 1641283 +  -5.8  -2.80935   TCAGCCAACGAAGGT                TCCG ATAA CGGA                 TCTGCTGGGTCCACT  51 246
 GF1_RS07255 1642497 .. 1642517 +  -2.3  -2.57564   TTTCCCCTTTTCCAA            GCAGACCTG CCC CCGGGCCGC            CTTATGAAAAAATCA  38 68
 GF1_RS07260 1646394 .. 1646412 +  -2.4  -3.54424   AGGACCCGGCTTTCT             TCATCTTG AAA TAGGGTGA             TTTGCCCGGGTCCGG  47 488
 GF1_RS07280 1651692 .. 1651703 +  -2.2  -4.72272   GCTCTTGCCGCGTAT                CTCT GTCG AGGG                 TTTTTCCTGGAACAG  66 291
 GF1_RS07285 NONE
 GF1_RS07290 1653681 .. 1653702 +  -4.4  -4.72007   CCGGACAGATCCAGG           TGGGGC CGTTACTCAT GCCCCA            TTTGTTTTCCTCGAA  76 148
 GF1_RS07305 NONE
 GF1_RS07310 NONE
 GF1_RS07315 1657081 .. 1657099 +  -5.2  -4.58283   CAGCTGTCTCAGTCT             GCGGTGTA GCC TGCACGGC             TTTTTCCACAGCTTC  75 333
 GF1_RS07350 NONE
 GF1_RS07355 1667852 .. 1667902 + -21.3  -3.67976   CGACCCCAAAAAAAA GGCCGCCAGGCACGGGAAT TTTTTCTTTTCTC ATCCCCGTGCCTGGCGGCC TTTGGCGTTCATACG 100 63
 GF1_RS07380 1673683 .. 1673695 +  -6.2  -3.55444   TAAACAGATTTTATA                CCGG AAAGG CCGG                TTTCAGACATGGCAC  58 90
 GF1_RS07385 NONE
        lptF 1676638 .. 1676657 +  -5.6  -4.00234   CCGCCTGCCGGGGGT            GGGG-GCGG AAT CAGCTCCCC            TTCTTCTCTTCCTTC  63 46
 GF1_RS07400 NONE
 GF1_RS07405 1680009 .. 1680028 +  -6.4  -3.15579   GTTCGCTGAGCAGAT            CGATGGCCT TCT GGGCCA-CG            TTCCTGGCCCCTTCC  52 268
 GF1_RS07455 1692083 .. 1692121 +   -10  -3.14132   CCAGGGAGAATCTCC   TGACGCTGCCGCTGCGCC CCC GGCCGTGCGGCAGCGACC   TTCATCCGCCCAGCC  70 99
 GF1_RS07460 1693263 .. 1693290 + -11.3  -4.30576   AGGCAAACCGAAAAA        CACCCCGATGC CATCGC GCATCCGGGTG         TTTTCCTGATCCCCC  95 77
 GF1_RS07465 NONE
 GF1_RS07470 1695180 .. 1695218 + -12.4  -2.78384   CCCTGGCCTGATCCT   TCCTGGTACCGGGGCTGT CCG ATGGTCCCGGTACCCGCA   TCTCATCCAACCGGA  77 30
 GF1_RS07475 NONE
 GF1_RS07480 NONE
 GF1_RS07485 NONE
 GF1_RS07490 1699160 .. 1699173 +  -3.7  -4.08767   CAGGGTGCGGCCGGT               CTCGC CGAT GCGTG                TTTTCAGGCCATCGG  60 399
 GF1_RS07540 1712924 .. 1712934 +  -6.8  -4.87626   CAGCGGTGATGGTAT                 CGAG CTG CTCG                 TTTTTCATCTTCACC  87 112
        xseA 1717770 .. 1717780 +  -4.6  -4.26344   CTGCTCTTCCTGCAT                 CTCC CGG GGGG                 TTTTGCTGAGAATCT  67 229
 GF1_RS07610 1729766 .. 1729781 +  -4.7  -4.63218   TTTATAAAAAAAATG              GTTCG CCACGT CGAAC               TTTTCTTGACAAGCC  72 306
 GF1_RS07650 1737351 .. 1737363 +  -7.7  -3.21924   GGAAGCCGAGGGTAT                GGTCA TGT TGACC                TATTGTGCCGGCTGC  61 15
 GF1_RS07655 1737724 .. 1737738 +  -2.8  -2.73124   TAACACAAAAAACTA               CTTTGT GTT ACCAAG               CTTTGACAGCTCCAC  41 206
 GF1_RS07660 1739591 .. 1739604 +  -8.1  -2.87344   CCACCGTTGACAACA               TCCGC CAAG GCGGA                TATATAGCGACCATG  58 165
 GF1_RS07665 1740334 .. 1740357 +  -3.7  -4.09685   CATTGCGGACAGCGC          CCCCTCGTC GAACCG GACGTGCGG           TTTTACCGCATCCGG  60 395
 GF1_RS07690 1745802 .. 1745812 +  -6.8   -3.3785   GGTAGTAGACGGTCT                 CCTG GGA CAGG                 TTGTACATCAGTTCG  58 420
 GF1_RS07715 1751666 .. 1751691 +  -3.3  -3.10796   CCGTTCGAAGGAGTT         CATGCA-TGACC AGG GGTTTCTGCATG         TATTCACTGATGCCC  43 174
 GF1_RS07745 1761359 .. 1761380 +  -5.1  -3.94409   GCCGAGATAGAAAAG           CCGCTCCAGC GCC GCTG-AGCCG           TTTCTACCTGGTGTA  63 8
 GF1_RS07840 NONE
 GF1_RS07845 1778735 .. 1778747 +  -4.8  -5.00616   TGCGTTCCGAAACGG                CGGT TCGGT ACCG                TTTTTTCGGACCACC  80 402
 GF1_RS07870 1785905 .. 1785916 +    -3  -2.97951   CCGGAGAGTAACTTT                TTGT TTTT ACAA                 GTTTATGCTGGAGTG  42 30
 GF1_RS07875 1786678 .. 1786688 +  -2.4  -3.85698   GGTACTTTTCCACTG                 TGCG CAG CGCC                 TTTCTGACCGGAGCC  53 402
 GF1_RS07895 1791720 .. 1791732 +  -3.3  -3.06915   CAGAGGCGGCGCTGG                CATGG ATA CCAGG                TTGCCTGCCGTGAGT  43 54
 GF1_RS07900 1792203 .. 1792221 +  -3.8  -4.49958   TCATCTTTTCTTCGT             TTGGTGGC TAG GTCAACAA             TTTCTTTCCTACGCT  68 170
 GF1_RS07960 1801566 .. 1801592 +  -2.1  -2.99471   CTGTCCGCCGCACAA         AACAGCGCCTC CCGAC GAGCCGCTGCA         TCTCTCTGCCCATAG  42 52
 GF1_RS07965 NONE
 GF1_RS07970 NONE
 GF1_RS07975 NONE
 GF1_RS07980 NONE
        trfA NONE
 GF1_RS07990 NONE
 GF1_RS07995 NONE
 GF1_RS08000 1807027 .. 1807040 +  -2.3  -4.59773   CGGATAAGAGAGGGT               GAAGG GACT CCTCC                TTTTTAAAACTCCCC  66 245
 GF1_RS08005 NONE
 GF1_RS08010 NONE
 GF1_RS08015 NONE
        traL NONE
 GF1_RS08025 NONE
 GF1_RS08030 NONE
 GF1_RS08035 NONE
 GF1_RS08040 NONE
 GF1_RS08045 1812597 .. 1812611 +  -2.8  -3.26649   CACTGCCTGATCAAA               TCAGTT GAT AACGGA               TTGATATAACGATGT  45 2
 GF1_RS08050 NONE
 GF1_RS08055 NONE
        traN 1820089 .. 1820099 +  -8.2   -3.4252   AGGATAGCGCACAGC                 CCGC AGG GCGG                 TTGTAATCGGTGACG  67 406
 GF1_RS08065 1821811 .. 1821822 +  -5.8   -3.1544   CAAAAAATATGTTTT                CCGT AAAG ACGG                 TTCGATATGGTGTCA  54 408
 GF1_RS08070 1822182 .. 1822192 +  -2.4  -5.06505   ACAAGGCCTTGAAAG                 GGCG GTT CGCG                 TTTTTCTATGTGATT  74 185
 GF1_RS08075 1823624 .. 1823644 +    -6  -2.87132   CGATGTGATGACCTG            ACCCGCCG TCAAT CGGTGGGC            TATATCAAAGAGCAC  52 25
 GF1_RS08080 NONE
 GF1_RS08085 NONE
 GF1_RS08090 NONE
 GF1_RS08095 1826571 .. 1826582 +  -2.2  -4.55625   AGCAATGGATAGTTT                GCAGC CAA GC-GC                TTTTGTGATCTTGCT  63 140
 GF1_RS08110 NONE
 GF1_RS08115 NONE
 GF1_RS08120 NONE
 GF1_RS08125 1829568 .. 1829587 + -12.8  -2.99649   GGTTGCGCTATCCCT            CCTCGGCC TGAA GGCCGGGG             TCTCTCTCGCAGTAT  79 57
 GF1_RS08130 1831302 .. 1831324 + -10.6  -3.18912   TTGCGCGGAAAGCCC           CGTCCTCC AGGGCGG GGAGGACG           TTAGTCAGTAACTAC  74 238
 GF1_RS08145 1837732 .. 1837755 +  -3.7  -4.09685   CATTGCGGACAGCGC          CCCCTCGTC GAACCG GACGTGCGG           TTTTACCGCATCCGG  60 111
 GF1_RS08155 NONE
 GF1_RS08160 1842129 .. 1842140 +  -4.4  -3.39908   ATGACGAGGAATTTT                GACA GTTG TGTC                 TATGTTTTCAAGGAG  51 24
 GF1_RS08165 1842403 .. 1842413 +  -2.4  -3.09492   TTGCCAGATTCAACA                 GGCC CTG GCCC                 TGTTGAGATTGAAGC  42 9
 GF1_RS08170 1843279 .. 1843303 +  -4.5  -3.78329   GTTGTTACAGATTAG          TCAATATATTA GGA TAATATATTAA          TTTGCATTAATAAAG  58 417
 GF1_RS08175 1844187 .. 1844204 +  -7.7  -2.92098   GAGAGTAGCCCATCT             CGCA-GCC CGG GGCATGCG             TACTTCCTTTGCTTC  56 434
 GF1_RS08185 1845665 .. 1845713 +  -6.2   -3.6682   TTTTGCTAAATTATA TCACCATAAATTGCAGGTTA TTGCACTTT TACCCTTCAATTTCTGGTGA TTTCCATGCGTCCAA  60 198
 GF1_RS08190 1847068 .. 1847100 +  -2.1  -2.72661   GGTGACAAGGCTTTT     GACGGTC-TGAAAA TGGGAT TTTTCAAGATCGAC      TAATTAACCATCATA  39 16
 GF1_RS08195 NONE
 GF1_RS08200 1848050 .. 1848062 +  -5.5  -3.87373   TATGTTATATAAGCC                TGGCG GGC TGCCA                TTTCTCGCCAATCTC  63 125
 GF1_RS08205 1848735 .. 1848788 +  -3.3  -4.79667   GAAAGTCAGACAAAA CATTGCAATATCCACCTGTCA TAAAAATTCACT TGGCAGGCGAATATTGCAATA TTTTTACTGAATTTT  71 59
 GF1_RS08210 1849671 .. 1849681 +  -2.4   -4.4267   TTGGGTTAGAATAGG                 GCCG GGT CTGC                 TTTTGGCTTTTGGCG  60 51
 GF1_RS08315 NONE
 GF1_RS08320 NONE
 GF1_RS08325 NONE
 GF1_RS08330 NONE
 GF1_RS08335 NONE
 GF1_RS08340 NONE
 GF1_RS08345 NONE
 GF1_RS08350 1871763 .. 1871796 +  -3.1   -3.7645   ACAAACAATAACATT     GCGTTTGATGGACTT CTTC GGGTCCATTACAGGC      TTATCTTCCTTCGGT  52 337
 GF1_RS08360 1872804 .. 1872862 + -17.2  -2.71731   GGGTAAATCCCCTGG -TTTCATTCCCTCAACTACCCCTT-CGG GTTGA TTGTGAGGGGTAGTTGAGGGAATGAAAC TAGTTCCCACCTGGC 100 66
 GF1_RS08370 NONE
        istA NONE
        istB 1876986 .. 1877008 +  -2.7  -4.07568   CTGTCAGCGTGCCAC           TGCGGGAAA TGCTT TTTTCCACA           TTTTCCCCAAACAGA  56 323
 GF1_RS08390 NONE
 GF1_RS08395 1879219 .. 1879243 +  -9.9  -2.86773   TCTGGCGCTTGAACT          CAGTCAGCCGG TAC CCGGCTGAAGG          TGATTGGATTTTTCG  68 293
 GF1_RS08405 1883143 .. 1883161 +  -2.3  -5.42259   GCTAAGAGCTAATAG             TGCAGCC AGGTG GGCTTCG             TTTTTTTCGACGTGA  82 499
 GF1_RS08425 1894589 .. 1894619 +  -5.4  -2.62184   GTTTTTCAGCGAGCA       TGTGTCTGTACCAG ACA CTGATGAAGACGCA       TCATGTGGCGCAACC  47 89
        tnpA NONE
 GF1_RS08445 1898812 .. 1898831 +   -10  -3.90922   GACCATAATAAAAAG            CCTCTGAC TTCA GTCAGGGG             TTGTTTACAAAAAAT  81 44
        pheA NONE
 GF1_RS08475 1906468 .. 1906489 + -15.9  -5.06735   AAAGACACAAAAAAA           CCCCGTCAG TAAC CTGACGGGG            TTTTTGTACTTTCTG 100 235
        tsaD 1909606 .. 1909618 +  -6.9  -3.87815   ACTGGCCCTGGGCAT                GGCGC TCG GCGTC                TTTATCGGCATCACG  68 116
        rsmA 1911193 .. 1911203 +  -8.2  -2.57931   AGTCCCTTGACCAGG                 CCGG AAT CCGG                 ATTGTCGAACATCAC  59 211
 GF1_RS08510 1912763 .. 1912773 +  -8.2  -2.64155   TTTTCCCTGCTCAGC                 CGCC TGC GGCG                 TGAATTTCCCGAAGC  59 49
 GF1_RS08515 NONE
 GF1_RS08520 NONE
 GF1_RS08525 1917011 .. 1917023 +  -4.8  -2.82516   ACCTACGGACAGAAA                GAGG AGAGC CCTC                TATCCTCCTGAGAGG  46 2
 GF1_RS08535 1918462 .. 1918475 +  -5.3  -2.53715   GGAGGTCGACACCGA               CTTCA ATGC TGAAG                ATTGATGGTAATCAG  47 7
 GF1_RS08555 NONE
 GF1_RS08560 1925273 .. 1925288 +  -6.2  -3.45324   CCAGGCCCACCAGCT              TATCAG GAAG CTGATA               TATTTAGTGGGGGTG  58 29
 GF1_RS08565 1925373 .. 1925431 + -12.1  -4.49756   CGTTCACCTCCACCA -CCAGTTAGACGTTGCAAAGTCTGTAAG GAAA CTTACAGGCTTTCTAACCTTTAACTGGG TTTTGATCTTTGACA 100 26
 GF1_RS08570 NONE
         rrf 1928703 .. 1928738 + -14.9  -3.44381   GATCTTTTTTCTATA    TAAAACCCCTGTCAG ATACAA CTGACAGGGGTTTTC     CTTTTTCAGTTCAAT 100 37
 GF1_RS08580 1929588 .. 1929599 +  -2.2  -3.59867   TACCAGGAGATCAAA                GGCA TGGA TGTC                 TTCCTTGATTTTTTC  49 158
        nhaR 1937219 .. 1937267 +  -5.8  -3.60316   CAATCCACCTCTGGA CCAACCAGGCCCACCGTTCCGTC AGGA GGCTGAACCGTGGCCC-GGCCGG CTTTTTTCACCGCCT  60 132
 GF1_RS08605 NONE
 GF1_RS08610 1938829 .. 1938853 +  -5.5  -3.53091   CCAGATAGACCAGGT          GAGCCGCCAGG CGG CCCGGCACCTC          TTTGAGGGAAAGACT  55 243
         hcp 1941085 .. 1941116 + -12.9  -2.68823   ACGACCTCCTCCTTA      TTGCGGCCGGGCG TCCTCC TGCCCGGCCGCGC       CTTCTCTCACACGAC  81 44
 GF1_RS08625 NONE
 GF1_RS08630 NONE
 GF1_RS08635 1943412 .. 1943440 + -21.8   -5.9218   ACGGCCTAAACTTAA        GAGGCCGCTGCC AGGAA GGCAGCGGCCTC        TTTTTTTATTCTCTC 100 57
 GF1_RS08655 1946236 .. 1946261 +  -6.1  -3.50853   CGCCGGGTATATCGG         GATCGTCAAAG GCTT CGATGACGATC          TTGTCATTGGCCCCC  58 379
 GF1_RS08670 1949089 .. 1949106 + -10.5  -2.52464   TGCCCCGCATGCCAT             GGCGGGG TTGT CCCTGCC              TGGATTAAGCAAGCC  69 111
 GF1_RS08675 1951641 .. 1951670 +  -2.3  -4.15453   AACAACCTATTAAAA       TCACTATGGAATTA CTA TAAT-CTGTGGTGA       TTTTCGGATAAATTG  58 321
        recQ 1953889 .. 1953902 +  -3.7  -3.72893   TTTTCTACTCTTTCC               TGCCC TCAA GGGCC                TTTCGTACCGCCCTG  56 60
 GF1_RS08700 1959709 .. 1959732 + -14.6  -2.63549   CAGTAAAACGGTTTC          TGGCTGCGGC TGGG GCTGCAGCCA           CTGTTCTTCAGACTC  90 197
        feoB NONE
 GF1_RS08710 1962796 .. 1962807 +  -5.8  -3.21099   GTTCAAAGCCAATCA                CGCT GCCA AGCG                 TTCCTCCTGCAAACC  51 131
 GF1_RS08725 NONE
 GF1_RS08750 1974666 .. 1974682 +  -6.5  -4.56187   TCTTCCCGAAAGGTT              CCGGTAA GAA TAACCGG              TTATTTTTGATTCTG  74 41
 GF1_RS08755 1975948 .. 1975959 +  -5.8  -4.24342   TCAGGCCAGACATGT                CGAG AACG CTCG                 TTTATTCATGAAAAA  70 65
 GF1_RS08760 NONE
 GF1_RS08765 1977566 .. 1977585 +  -9.4  -3.69323   AGTGAGGTCGACACC            TTCATCCA TCGG TGGATGAA             TTTCAGTGGTAATGA  73 159
 GF1_RS08770 NONE
 GF1_RS08775 NONE
 GF1_RS08780 NONE
 GF1_RS08785 1983386 .. 1983427 + -16.8  -3.04239   ATTGAGGATTCCAGG TTCTGAGCGATGGTATCCC CTGGA GGGATACCATCGC-CGGGA GTTTGTATGGCTGTC 100 36
 GF1_RS08810 1991049 .. 1991066 +  -5.5  -2.51815   ACAGACCATGGCGCA             TGTGCCG CATC CGGTGCA              ATCTTCCTCGTTCAC  45 340
 GF1_RS08850 NONE
 GF1_RS08855 NONE
 GF1_RS08860 2001821 .. 2001843 +  -6.3  -3.33696   CGCACCCATGGTGGT          CC-GGGCTGT GGCA ATAGCCCCGG           TTCCTTCCAGAACCA  56 346
 GF1_RS08900 2007988 .. 2008028 +  -3.5  -6.02345   TGCCACGGAGAGCCC GGTGCT--T-TTCGTCCATG TGCA CATGGACGAGTACCGGCACC TTTTTTTTGTCGTTC 100 208
 GF1_RS08985 NONE
        hemG NONE
        hypF NONE
 GF1_RS09000 NONE
        hypD NONE
        hypE 2033121 .. 2033132 +  -7.2  -3.61398   TTCTCCCTGGTCCAT                GCCG AGCA CGGC                 TTCTTCAAAGCCCGG  60 420
 GF1_RS09025 2037134 .. 2037150 +  -6.5  -3.49102   CTCACCCTCGGCCAT              GCGTCAG ACC CTGAAGC              TTCTCTACACCCTCT  58 479
 GF1_RS09035 NONE
 GF1_RS09040 NONE
 GF1_RS09045 NONE
 GF1_RS09050 NONE
 GF1_RS09055 NONE
 GF1_RS09060 2045739 .. 2045763 +  -3.3  -3.58343   TTCACATGCTCCCGG          GCCGCCCGGCC CAT GGTCCGTCGCC          TTTCACGATCATCCA  49 125
 GF1_RS09070 2048334 .. 2048353 +  -4.2  -4.07687   ATGACAATTCCAGCA            CTTTTCCC TAGG GGGCAGAG             TTTTCCCAGCACAAT  60 125
 GF1_RS09075 2050787 .. 2050804 +  -9.8  -4.16226   CCAGTTTCGCAGCCA             GCCGGG CATAGT CCCGGC              TTCTCTTTTTCTGTC  80 284
 GF1_RS09085 2053265 .. 2053296 + -15.9  -2.62983   GACATCGGTAAAAAA      ACAGCCGGGAAGC AATTTC GCTTCCCGGCTGA       TCATGTACCCCTCCC  95 52
 GF1_RS09090 2055541 .. 2055567 +    -5  -3.52117   TCCCTGGCAGAAAGC         CCCGATCAGGGC CCG GACCTTGTTGGG         ATTTTTCTCGCTGAA  53 332
 GF1_RS09110 2060133 .. 2060162 +  -3.3  -3.48593   TATTGCCCACCGTCG       CCGCGGACCACCA GGCA TGGCGGACAACGG        TTCTCTGGCAAGATA  49 55
 GF1_RS09115 2061004 .. 2061027 +  -5.2  -3.30441   TCATATCATCGAGCA          GTCCGG-GGCA TGC TGCCGCTGGTC          TTCTGCACCATCATG  54 355
 GF1_RS09125 2061647 .. 2061680 +  -2.5  -3.00081   GGAAAAAATGGCGCC     GGATATAGCA-GGC AACTTCA GCTGTGCTCTATCC     CCTTTTTTTCTATAA  42 18
 GF1_RS09130 NONE
 GF1_RS09135 2062937 .. 2062947 +    -4   -4.4715   TATTCTGCTGCTGAA                 GAAA TAA TTTC                 TTTTATCGGTTGAGA  67 19
 GF1_RS09140 2064753 .. 2064781 + -15.3  -5.95539   CATTGTCCCCTGAAA        CGTCCCGCCTCTA TCA TGGAGACGGGACG        TTTTTTTGTTTACCG 100 74
 GF1_RS09145 NONE
 GF1_RS09150 2066524 .. 2066534 +  -6.8  -3.49475   GGATTCCTGAGAGAC                 CAGG CAA CCTG                 TTCTCTGAGGGTGCG  60 309
 GF1_RS09165 NONE
 GF1_RS09170 2071057 .. 2071071 +    -7  -3.65812   GAAATCGCCGACCAG               GGCGCG TTC CGCACC               TTCTGTTGACGCAAG  63 230
 GF1_RS09215 2081493 .. 2081513 +    -6  -2.87132   CGATGTGATGACCTG            ACCCGCCG TCAAT CGGTGGGC            TATATCAAAGAGCAC  52 25
 GF1_RS09230 2083625 .. 2083637 +  -6.2  -3.30124   GAGGACCTTGTAGCC                GGCC TCGAC GGCC                TTGTGGCCGATGCCG  54 355
 GF1_RS09270 2092085 .. 2092112 +  -9.8  -2.74269   CGGAAAGGAAAAATA        CAGCCTGGAGCC GGCA GGTTCCCGGTTG         ATTCTCTGGTATACA  67 82
 GF1_RS09275 2092576 .. 2092600 + -21.5  -6.12458   GCAGCAGATACAGCG          GCCGCTGCCAG TTT CTGGCAGCGGC          TTTTTTCTTTTTTTC 100 61
        malQ NONE
 GF1_RS09330 NONE
 GF1_RS09335 2104267 .. 2104292 + -14.1  -5.60993   TCACCAACAAGATCA         GGGACTTAGCC AATT GGTTAAGTCCC          TTTTTTTATGCCCGC 100 35
 GF1_RS09340 2105989 .. 2106009 +    -6  -2.87132   CGATGTGATGACCTG            ACCCGCCG TCAAT CGGTGGGC            TATATCAAAGAGCAC  52 25
 GF1_RS09345 2107182 .. 2107194 +  -3.4  -3.72576   AGCGAGGGAATGGCA                TGGT TCTTC ACCA                TTTCCTGACAGGACA  53 276
 GF1_RS09390 NONE
 GF1_RS09395 2118026 .. 2118044 + -10.2  -3.48276   GGATATTCATCCCGA             CCCTGCCC CGA GGCCAGGG             TTATCTGCCGAACAC  74 70
 GF1_RS09400 NONE
 GF1_RS09405 2120251 .. 2120265 +  -2.1  -3.02511   ATTGTTTCACCGGTG               GGAAG TAGCT TTTCC               TCTTGACACGGTGAG  42 46
 GF1_RS09410 2120445 .. 2120490 +  -7.1  -4.32046   TACCAGAATACCAAA GGCTAA-GAGCCGGGCATTAT ATCGCA ATATTGCCTG-CTCATTAGCC TTTACTTTTTGACAG  75 36
        thrS NONE
        infC 2123136 .. 2123154 +  -6.6  -5.40072   CGGCCGACCAGGTCG             GAGCGGGT TTG ACCTGCAC             TTTTTTTCGGACAGG  95 47
        rpmI NONE
        rplT 2123902 .. 2123912 +  -2.4  -3.05384   CACTCAGGTTGTAAA                 GGCC TCC GGCG                 TTAACTGAGAGACCG  42 7
        pheS 2125165 .. 2125205 + -13.6  -2.84098   TCTCCGGTATCCGGT TGAAAACCTTG-TC-CCGTC CCG GACGGTGAACAGGGTTTTCA TGATTCGTTGCGCAG  86 159
        pheT NONE
 GF1_RS09445 NONE
 GF1_RS09450 NONE
 GF1_RS09455 2128561 .. 2128582 + -15.9  -6.04419   CCAGTAAATGAAAAA           CGGCCGCAA CTCA TTGCGGCCG            TTTTTTTGTTCTTTT 100 38
 GF1_RS09490 2136336 .. 2136348 +  -3.3  -3.53012   CATTGAAACCAGTGC                CGGGC CTC GCTTG                TTTCACGGGACGCCA  49 79
 GF1_RS09505 2141642 .. 2141655 +  -5.3  -3.93367   ATATATGTGAGCAGG               TTCTC GAAA GAGAA                TATTTTCTTCAGGCA  63 120
 GF1_RS09510 2143712 .. 2143722 +  -5.4  -3.54424   ACAGCCTTGAACAGT                 CCAT ACC ATGG                 TTTACAGCCATAAGG  56 62
        sppA 2145883 .. 2145907 +  -2.8  -5.08255   CTCCAGGAACCATTC          CGGCCAGGTA CCGGC TATTTGGACG          TTTTGTTTTAAGGAT  77 121
 GF1_RS09520 NONE
 GF1_RS09525 NONE
 GF1_RS09530 NONE
 GF1_RS09535 2148289 .. 2148311 +  -2.6  -3.01915   GATTTCAGGACAATA          C-CGGCCAG CCGATC CGGGCCGAG           ATATTTTTCTGCCAG  41 373
 GF1_RS09545 2152380 .. 2152396 +  -5.1  -2.89881   GAAGGTGTCGGGCCT              CACTTGT TTC ACGGGTG              TCTGTGGCCTGGATG  49 83
 GF1_RS09550 NONE
        dinB 2154430 .. 2154458 + -10.2   -3.1211   CGGTGGCAAAAGAAA        GGGGCGAGAAGA AAAAA TCCACTCGCCCC        TTGACTCATGTCCTG  69 444
 GF1_RS09570 NONE
 GF1_RS09575 2158543 .. 2158562 +  -6.4  -4.25104   AACATGAAAGCTGCT            GTCCC-CCT GCA GGGTGGGAC            TTTTCCTGAGCCGGG  70 74
 GF1_RS09600 2166158 .. 2166170 +  -9.1   -2.7752   TGATCTGTACGTTAT                GCTGC CTG GCAGC                CTTTAAACTCATATC  63 44
        ccsB NONE
 GF1_RS09610 2168056 .. 2168071 +  -4.7  -3.75153   CGGGGAATTACGCCG              GGTCA TTGCCT TGACC               TTTGCCTTGAAAGAC  56 502
 GF1_RS09690 2184689 .. 2184724 +  -6.7  -2.61602   TACGCTTCCACAGAG    GAGCCCGGAGCTGCT CCAAGC GGTGGCCCCGGCCTC     TGACTTCTGAATTCG  52 206
        tatB NONE
        tatC 2186146 .. 2186168 + -10.4  -3.10522   GGTGGGGACCTCTTC           CCGGCAGGCC ACT GTCCAGCCGG           TCTGTTCGCTGACCT  66 190
 GF1_RS09735 2192684 .. 2192709 +  -6.9  -2.57244   GGTATTTTAAAAAAA         GATCG-GATGGC CGC GCCATAACGATC         TGAATTCATAAATAA  52 102
 GF1_RS09740 NONE
 GF1_RS09745 2195667 .. 2195707 + -15.7  -2.57344   ACTAATGCAACACAA  CTGTAGCAATGCAACAC CGTGGTA GTGTTGCATTGCTACAC  ATTGTGGCACCACTC  95 36
 GF1_RS09750 NONE
 GF1_RS09755 NONE
 GF1_RS09760 NONE
        nrfD 2198904 .. 2198929 + -20.5  -5.93809   CAGGCAACAAAAAAA         CAGCCCGCTGC GTTC GCAGCGGGCTG          TTTTTTTTATCCAAA 100 61
 GF1_RS09805 2209167 .. 2209215 +  -7.2  -3.29273   CGCATGCCCGGACTT TCCGGGGTGG-AACTGCTGGAAC AGGT GCGCCAGCTGACCCCGCCCCGGA TATTATCATGATGAC  59 203
 GF1_RS09815 2210467 .. 2210479 +  -6.9  -4.70659   TCATAGAGTTTCTCG                TCCCG ACG CGGGG                TTTTTCGATGTCCCC  81 154
 GF1_RS09880 2227360 .. 2227385 +  -6.1  -4.07885   AACCAAGGGTATCGG         GCAGGTTTTCC GGGA GGATGATCTGC          TTTTCAGCCAGGATG  66 237
        ilvB NONE
        ilvN 2238113 .. 2238136 +  -8.8  -5.65927   AGATCTCAGAAACAA          GGCATGGCCG ACCG TGGCTGTGCC           TTTTTTCTTTGCCTG 100 55
 GF1_RS09935 NONE
        pssA NONE
        rsmD 2240425 .. 2240438 +  -3.7  -3.01712   CGCTAACCTCAAAGA               CCCTC AAAA GCGGG                TGTTGCCCGCAACCA  46 35
        coaD NONE
 GF1_RS09955 NONE
 GF1_RS09960 2242743 .. 2242758 +  -5.4  -2.54801   GGTTCGCCAGCCGAC              CTG-CCG GGC CGGCCAG              ATATCTTTAAGCATG  45 356
 GF1_RS10040 2260463 .. 2260483 +  -3.9  -2.78018   TTTCCAGACCTATTG            CCGGCAACT GCC ACTTCCCGG            TCATTGCTGCCGCAT  43 310
 GF1_RS10045 2261395 .. 2261405 +  -6.8  -2.98823   GAAGGGAAGAAAAAA                 CCTG TTT CAGG                 TCTGTCTGAAAAGCA  56 39
        nifJ 2265140 .. 2265152 +  -4.8  -3.21747   TGGGACGTTACAAAG                CCCT GGAAG AGGG                TTGATCCTCCCCTGC  49 9
 GF1_RS10065 NONE
 GF1_RS10070 NONE
 GF1_RS10075 2270571 .. 2270593 +  -6.3  -3.28217   CCATTGACGACAAAA          GCGGG-TACC GTCC GGTAATCCGC           TTCCCTATTGTTTTC  56 34
 GF1_RS10105 NONE
 GF1_RS10110 NONE
 GF1_RS10115 2278894 .. 2278942 +  -3.1  -3.34398   AGCTCACCGGAGCTG TAACCGGA-AGGCGGCGTCCGGG TCCTT CCCGGCC-CATCATATCCGGTTA TGTTTCAAGAACAAA  47 40
 GF1_RS10120 NONE
 GF1_RS10125 2281151 .. 2281201 +  -2.5    -3.281   GACAACACGCCCCGT TCACGTGC-TCGTGCACGTG AACGTTAACAGG CACGAGCACGGCGCCCGCGA TGTTATCCCTTCCCC  45 111
 GF1_RS10270 NONE
 GF1_RS10275 2315105 .. 2315136 +    -8  -4.19746   TGGCTCTCCGATCAG      TTGCGTGACA-CCGC AGA GCGGATGTCACGAGG      TTCTTTTGAAATCCC  76 337
 GF1_RS10300 2323762 .. 2323792 + -11.3  -4.59773   CGGCTACCCGGTCAC      CTGCGTGA-CACCGC AGA GCGGTGATCACG-AG      TTTTTCAAGGTAGCC 100 415
        gspF 2325478 .. 2325491 +  -3.8  -4.09739   TTCCCTGATCTGGGC               CAGG GCACTG CCTG                TTTTCGCCCCCTTGC  60 170
 GF1_RS10370 2343211 .. 2343243 +    -7  -5.53288   TGCCTCCCCGATCAT     TTGCGTGACA-CCGC AGGA GCGGATGTCACGAGG      TTTTTTTGGGTTGCC 100 291
 GF1_RS10375 2345142 .. 2345171 + -13.1  -2.90219   TTGACCCCGTGTTGA       CAATCGATATACG TTTT CGTATATTGATTG        TATGTACACATTGTC  82 91
 GF1_RS10380 NONE
 GF1_RS10385 2346095 .. 2346125 +  -8.3  -5.53288   GGCTCCCCGATCATT      TGCGTGACA-CCGC AGGA GCGGATGTCACGAG       TTTTTTTGGGTTGCC 100 165
 GF1_RS10390 NONE
 GF1_RS10395 2347050 .. 2347080 +  -8.3  -5.53288   GGCTCCCCGATCATT      TGCGTGACA-CCGC AGGA GCGGATGTCACGAG       TTTTTTTGGGTTGCC 100 125
 GF1_RS10480 2365256 .. 2365284 +  -3.1   -4.5442   GGTACGGGAGGTGGC        CATGGCTGTTTGA TCG TCAGGTAGCGGTG        TTTTGTCCTTGGACC  65 13
 GF1_RS10575 2389279 .. 2389297 +  -3.8   -3.6707   GCAAAACTTCTCTTT             CCTTTATC CCT GGTCAAGG             TTTCGCCTGTTCGGT  53 65
 GF1_RS10580 2392081 .. 2392092 +  -5.8  -3.63515   GTCACGAGGAAAGCA                CAGG GTCG CCTG                 TTATTCAGGATGGCA  60 118
 GF1_RS10715 2422939 .. 2422949 +  -4.6  -3.86015   TGACGCTTATTCTCT                 GGTG GGG CGCC                 TTTATCAAGGAGATC  60 374
 GF1_RS10730 2429126 .. 2429140 +  -2.8  -2.62184   CACACTGGCACAAAG               TACCAC TCG GTAGTA               TAGTATCAAGAACGA  40 102
        nifU NONE
        nifS NONE
 GF1_RS10745 2432392 .. 2432423 +  -7.3  -3.79419   GTGATTATCCTGTTT      TTGCACAGGCAGC ATTCCG GTTGTCTGTGCCA       TCTTTTCTACCCACC  66 170
 GF1_RS10750 2434264 .. 2434294 + -18.5  -5.74684   CCCTTTTTAAAAAAA       CGGGTCAAAAGAG CGGGT CTCTTTTGACCCG       TTTTTGTTTTTGTTG 100 62
        pilB 2436762 .. 2436786 +  -7.8  -3.05384   TATCCGCATAGAGGG          GCTATCGGAG TCTCC CTCCGGTCGC          TTACCTGCGGACAGC  59 168
       folE2 2451661 .. 2451674 +  -2.3  -3.22774   TAGGGGGTATCGTTG               GCCAT GGCC ACGGC                TTCCTCCTCGGTATC  44 342
 GF1_RS10830 2453714 .. 2453766 +  -5.6  -2.78384   ATAGACCTGGCAGGC CGTTGATTCGGCAGCCAGGCG CTGGGCGATGTT CACCTGGCTGCCG-ATAACCG TGTAGTCAAGGCGGC  47 187
 GF1_RS10840 2456627 .. 2456681 +  -7.6  -5.07652   GTTCACCCTGCTTTC GG-CCTGCCTCCTCCCGGTGGCCGG CCACAC CCGGCAGGCGGCCGGGGGCAGCTCC TTTTCTTTTACAGCA  91 56
 GF1_RS10845 2458475 .. 2458493 +  -5.2  -4.58283   CAGCTGTCTCAGTCT             GCGGTGTA GCC TGCACGGC             TTTTTCCACAGCTTC  75 299
 GF1_RS10860 2462974 .. 2463005 + -17.4  -3.01912   GATGGTAATCACAAA      AGAAAAAGGCCGGG AATT CCCGGCCTTTTTCC       TGTATATGGCTCTGC 100 303
 GF1_RS10870 2465111 .. 2465127 +  -2.2   -2.5805   CGGACCTGGAGGAAA             C-GGTCC AGCA GGGCCAG              GTTCTCCGCGCTCAT  38 453
       extKL 2471902 .. 2471919 + -14.1  -5.07652   ACGCCTACGACCGGA             GCGGGCC TGCG GGCCCGC              TTTTCTTTTGCCGGC 100 56
        queA 2476128 .. 2476145 +  -5.5  -2.63102   CTCATCCCTCTCACA             GAACCGT ACGT ACGGGTC              TCGTATACGGCTCCT  47 234
 GF1_RS10935 2483724 .. 2483758 + -18.9  -3.32022   GTAATACCGTCTTGA     CGTAAAAAGGTCAGA CCTGC TCTGACCTTTTTACG     TTACTGTATCAACCC 100 53
        murI 2484609 .. 2484621 +  -3.4  -3.05483   GCCGCCCCATAGATC                TGGA GACGA TCCA                TGTATAGATTTTTTT  43 6
 GF1_RS10945 NONE
 GF1_RS10950 NONE
 GF1_RS10955 2487853 .. 2487875 +    -4  -4.18058   ATCCCGACCTGGAAG           CCATGTGCAG TTC CGGTCCATGG           TTTTCCCATCTCATT  62 209
        rpsA 2489218 .. 2489235 +  -7.7  -3.18274   GGTGATCGCACTCCT             TCCGGACC AGA GG-CCGGA             TTCCCTTGCCCTCGC  59 153
        glgP NONE
 GF1_RS11010 NONE
 GF1_RS11015 NONE
 GF1_RS11025 2502471 .. 2502510 + -12.2  -5.86965   ACGATAAATCTGAAA  GGCTGTCCTTTTCTTGAC TCAG GTCAAGGATGGGATGGCC   TTTTTTTTGGTACAT 100 150
 GF1_RS11030 2503924 .. 2503950 + -21.6  -5.72053   CGCTTAAACGTCAAA         GGCGGCAGTCCC TCT GGGGCTGCCGCC         TTTTTTGTTTGCTTA 100 63
 GF1_RS11065 2510518 .. 2510533 +  -3.2  -3.83561   ACAATCAACATGTAA              CCTCTG GCAG CAGATG               CTTTTTTTCCCACAA  53 129
 GF1_RS11070 2510929 .. 2510967 +  -8.3  -2.78596   TCACAGTGTAACTGT  CTGTTGAAAAAC-GCAGC GAGC GCAGTAGTTTTTCAACGG   TCTGGTGAACGCATG  60 30
 GF1_RS11075 NONE
 GF1_RS11080 NONE
 GF1_RS11085 NONE
 GF1_RS11090 NONE
 GF1_RS11095 2518128 .. 2518155 +  -9.8   -2.5955   GCCGGTGGCTTCTTC        CATGGCCCGGTG CCAG CGCCCGGCTATG         TCGGTTATCAGGGAT  66 291
 GF1_RS11170 NONE
        mutT 2536392 .. 2536406 +  -4.2  -4.57569   ATTTCCTCAGAAAAC               CGTTGC GCT GCAACC               TTTTTGAACGAGTAC  67 89
        istA NONE
        istB 2539483 .. 2539493 +  -5.4  -3.91144   GCGCCGACCGGATGT                 CTCT GAA AGAG                 TTTCTCGGCTATCAG  63 184
 GF1_RS11190 NONE
 GF1_RS11195 2541889 .. 2541903 +  -2.7  -3.48395   CCACTGGTTCCGGTG               CCTGC TCCCT GCCGG               TTATGTGACCGCCGT  49 152
 GF1_RS11210 2543940 .. 2543951 +  -5.8  -2.87564   CCTTATTCCGTTTTG                TGCC AGCA GGCA                 TCTATGCAGACCTGG  52 238
 GF1_RS11255 2551419 .. 2551430 +  -5.8  -3.57462   TCATTTCCCAAGTGG                CTGG TTCG CCAG                 TTTCCCCCTCCACTG  60 89
 GF1_RS11270 NONE
 GF1_RS11275 NONE
 GF1_RS11315 NONE
 GF1_RS11320 NONE
 GF1_RS11325 2563545 .. 2563579 +  -2.7  -3.05775   TTTCCGGGGTCAAAC     CGGCAGGGAGCAGGT GAACG ACATGCTGCTGGCTG     ATTTTGGCACCTCAT  43 9
 GF1_RS11330 NONE
 GF1_RS11335 2565085 .. 2565106 + -11.5  -4.47328   ACACCAAAAAAAAAA           GGCGCTCCC CGAA GGGAACGCC            TTTTCTCATCCACTT 100 40
 GF1_RS11705 2626508 .. 2626527 +    -5  -3.69323   AGTGAGGCCGACACC            TTCAGGCA TCGG TGGCTGAA             TTTCAGTGGTAATCA  55 135
 GF1_RS11750 2634338 .. 2634364 + -19.5   -4.8622   CACCGGAAAAATACA         GGGCCGCAACC ATCCA GGTTGCGGCCC         TTTTTCGTTGCAGGA 100 39
 GF1_RS11755 2634813 .. 2634823 +  -3.2  -3.55421   GACAGCTGAGCTTTG                 GTGG TAA TCAC                 ATTGTTTTTTTGTTA  49 32
 GF1_RS11760 NONE
 GF1_RS11765 NONE
        hflK 2638105 .. 2638128 +  -6.6  -2.70932   CCCAGCCGGCAGTCG          CAGCC-CCTGG AGA CCGGGTGGCCG          TCCTTACAACAAGAA  53 63
        hflC 2639146 .. 2639171 + -19.1   -6.2845   GAGAAACCCTTTTTT         CTGTTCCCGGC TTCG GCCGGGAACAG          TTTTTTTTTGTGATT 100 61
 GF1_RS11790 2642575 .. 2642627 +  -9.8  -2.72344   CGCCGAATCGCAGGG AGAAACGTTTGACCTGGAC-CGCCC TAAA GGGCGCGTCCGGGTCAAGCGTCGAG TCGTTGACAATGGAG  61 136
        hemH 2648354 .. 2648369 +  -2.5  -3.61398   GGTAAAAAGCCGGAG              GACGG GAGACA CTGTC               TTCTTAAGGCAGCCC  49 296
 GF1_RS11840 NONE
 GF1_RS11845 NONE
 GF1_RS11850 2657975 .. 2657985 +    -4  -3.17219   GAAATATTTTTAAGT                 TACA AGG TGTA                 TTAATGAAAATTCTG  47 28
 GF1_RS11855 NONE
 GF1_RS11860 2660678 .. 2660693 +  -4.6  -4.68103   TCCGCTGCGGTCTGC              AACCGG CGCA CCGGTC               TTTTCTTCAGCTTGC  72 423
 GF1_RS11870 2663923 .. 2663935 +  -3.5  -2.53015   ATAATAGATAACTTC                TATAA GTA TTATA                TAACTTCCAGAATGT  42 103
 GF1_RS11875 2664478 .. 2664490 + -10.5  -2.76361   ACAGCGTCCTGACAT                CCGGC CGA GCCGG                CTTCTCTGATTCCTG  70 150
         aat 2665386 .. 2665406 +  -9.7   -3.1247   GAAGAACACCTGTAC            CGGCGCTGA TAT TTAGTGCCG            TTACATATCCGAACT  69 193
         rnr NONE
 GF1_RS11895 NONE
 GF1_RS11900 2671835 .. 2671849 +  -7.8  -5.14563   GCGGAGAAACGGCCT               GTTCCG GAG CGGAGC               TTTTTTGCTCAGAGC  91 97
 GF1_RS11905 NONE
 GF1_RS11910 2673402 .. 2673416 +  -3.5  -2.80699   AATTCTTTCCCCACC              CGCACC AGCA GG-GCG               TGATATTCGTTGAAC  41 164
 GF1_RS11925 2676022 .. 2676040 +  -5.2  -4.58283   CAGCTGTCTCAGTCT             GCGGTGTA GCC TGCACGGC             TTTTTCCACAGCTTC  75 314
        clpB 2680741 .. 2680770 + -23.7  -5.79595   ACCAGGCCGACAAAA       GGCCCATTCCGGC TGCT GCCGGAATGGGCC        TTTTTTATTTTCCGC 100 44
 GF1_RS11940 2681903 .. 2681949 +  -2.3  -5.31275   TTGTCGGTTACCGGC TCGGTGAGCACCACTTTGG AGAGAAAGG CAAAATTGGTGTTTTCCGA TTTTTTATCATGGAG  80 513
 GF1_RS11950 NONE
 GF1_RS11955 2684615 .. 2684640 +  -7.5  -5.46657   AGCGGGCCGAAACGA         ACCTGACCGGC GGAA GCTGGTTAGGC          TTTTTTGTTGAAGTC 100 329
 GF1_RS11960 NONE
 GF1_RS11965 2686457 .. 2686472 +  -6.2  -3.45324   CCAGGCCCACCAGCT              TATCAG GAAG CTGATA               TATTTAGTGGGGGTG  58 29
 GF1_RS11970 2686557 .. 2686615 + -12.1  -4.49756   CGTTCACCTCCACCA -CCAGTTAGACGTTGCAAAGTCTGTAAG GAAA CTTACAGGCTTTCTAACCTTTAACTGGG TTTTGATCTTTGACA 100 26
 GF1_RS11975 NONE
         rrf 2689863 .. 2689876 +  -4.5   -5.4251   CTGCGTGGGAGAGTA               GGTCG CCGC CGATC                TTTTTTCTATATCGA  90 12
 GF1_RS11990 2693637 .. 2693692 +  -5.4  -2.89683   ATGAGGCCAGTCCTT CGAGGGCCAGCCTGGTCAAAACCGGA TATTTC TCCGGGTC-GA-CAGGTTGGCCCAGG TCTCTCCAGTCCAGT  48 241
 GF1_RS12005 NONE
 GF1_RS12010 NONE
        thiF 2698139 .. 2698182 + -10.4  -3.27298   ACGCAAATCGTTAAA GAGCACGAA-GAACCAGCACC AGT GGTTGTTGTTCTTTCGTGCTC TTCCTGGTTACAAAC  70 98
        thiS NONE
 GF1_RS12025 NONE
        thiH NONE
 GF1_RS12035 2701744 .. 2701778 +  -4.9   -4.8048   TCTGATCGAACTATT     GGCGGCTGGAGCGTG TATTT TGTTTTTCAGCCGCC     TTTTTCGTCTCAGCC  75 56
 GF1_RS12040 2702683 .. 2702737 + -10.7  -2.63858   GGACAATGGTGGAAA CAGCCGGTCCGGGATCCAGGGATACCC GCC GGGTG-CCCTGAATCC-GCTCCAGCTG GTTGTAGATCTGCTC  62 189
 GF1_RS12100 NONE
 GF1_RS12105 NONE
        recO 2713191 .. 2713214 +  -8.8  -3.86897   GGTCCCGGCGGTGAC          CAGCCGGTAG ACGG TTACCGGCCG           TTTCTGGCCGATACG  72 230
 GF1_RS12125 2718519 .. 2718549 + -11.1  -3.19234   ACTGAAAAAGCGGAT       CACGGCTGGAACG AGTGC CGGTCCAGCCATG       TGTATTCTCGAATTT  74 36
 GF1_RS12135 2720714 .. 2720741 + -12.1  -6.02914   TCGTTTATGATACGA        GGAAGGTTGTC CTGGCT GGCAACCTTCC         TTTTTTTTATGTCCG 100 56
        galE 2725576 .. 2725589 +  -5.2  -4.13767   ATCCTGCTACCCGGA               CCGG CAGAGC CCGG                TTTTAAGATCCACCA  65 120
 GF1_RS12170 NONE
 GF1_RS12175 NONE
 GF1_RS12180 NONE
 GF1_RS12185 NONE
 GF1_RS12190 NONE
 GF1_RS12195 NONE
 GF1_RS12200 2732001 .. 2732011 +  -2.4  -4.00756   GAACCACCCCCCTTC                 CCAG GCC CCGG                 TTCTTTCCTCGGCTC  56 43
 GF1_RS12205 NONE
 GF1_RS12210 2734411 .. 2734442 +   -18  -2.64472   AGTCAGGATCCAGGT      GTCTCCCGGCCGTC GACC GGCAGCCGGGAGAC       TGGGTTTCACAGATA 100 72
        cmoA NONE
        cmoB NONE
 GF1_RS12240 2739338 .. 2739348 +  -4.6  -2.70936   ATAGCGTTTTTTTTA                 CTGC CGG GCGG                 TCCTGTCCTTCATCC  46 37
 GF1_RS12245 NONE
 GF1_RS12250 2741182 .. 2741194 +  -3.3  -3.30145   AGGTGATTTGCACCA                CCAGT GGT ACCGG                TCCTTTTTAATGGTT  47 183
 GF1_RS12285 2747373 .. 2747383 +    -4  -3.42056   CGCAACTGAGGGTTT                 TCTT GCA AAGA                 TTGTCACTTGGGCAT  51 32
        trkA NONE
 GF1_RS12295 NONE
        mnmG NONE
         lgt 2753144 .. 2753178 + -21.6  -3.78934   ATACAAACAAAAAAA     GCGGCCCGGATATC CTGAGCA GATATCCGGGCCGC     TTCTTCTGGAGAAAA 100 8
 GF1_RS12325 NONE
 GF1_RS12335 2759678 .. 2759719 + -17.6   -2.5474   AGACCGGACTTCAGC ACATAAAAAAAAGCGGGC CCGACA GCCCGCTTTTTTTTATGC  ATCTTATGCATCAGA 100 47
 GF1_RS12355 2764311 .. 2764323 +  -6.9  -5.14563   CAAAACGCTCGGCAA                CCTGG GCC CCGGG                TTTTTTCCTGGCCAG  90 342
 GF1_RS12370 NONE
 GF1_RS12375 NONE
        mutS 2769446 .. 2769456 +  -6.8  -2.90075   TATTTTACCTCTACC                 CTGC AAT GCAG                 TATACTTCCCGGCAG  54 59
 GF1_RS12385 2771540 .. 2771572 + -16.4  -5.18355   CCATCAACAAAAAAA     GGCGCTCGAA-TCCG GAAG CGGAATTCGGGCGCC      TTTTTACTTTTTCAG 100 53
 GF1_RS12510 2795248 .. 2795260 +  -4.1  -3.64882   GACTAAAGCTGAATT                TGGTT AAG AGCCA                TATTATTTATAATAC  53 19
 GF1_RS12555 2806470 .. 2806493 +  -4.6  -3.97659   CAAAATCGGCCGAAA          CTCTTGACAA CAGA TCGTTAAGAG           TTTAATTAAATTCTT  60 230
 GF1_RS12560 2807030 .. 2807041 +  -3.6  -3.32354   ACCCTGGCAACACCA                CGCT CTGG GGCG                 GTTTTCATTTAAACA  49 213
 GF1_RS12565 NONE
 GF1_RS12570 NONE
 GF1_RS12575 NONE
 GF1_RS12580 2812142 .. 2812167 + -19.1  -5.29846   TCTTCCTCTCTCTTT         CCCCGGAAACC GCTG GGTTTCCGGGG          TTTTTCTTTGACATT 100 53
 GF1_RS12585 2815589 .. 2815619 +  -8.9  -3.16177   GGCACCACCGGTCAC       CGGATCCCGACCG GAAAG CGGACGGTATCTG       TTACCTATCTGGCCT  63 57
 GF1_RS12660 NONE
 GF1_RS12665 NONE
        rmuC 2841585 .. 2841599 +  -3.6  -2.64144   AAGCCACCCGTCCGG               GAATAA CCG TTGTTC               ATCTTTCAATACCAC  43 20
 GF1_RS12675 NONE
 GF1_RS12680 2842494 .. 2842509 +  -3.2  -3.06037   GATTCTGGAAGGCTG              ACATGG AACC CCATGA               TATATGCTTTGGCCT  43 25
 GF1_RS12685 2842785 .. 2842815 +    -6  -3.07895   GCCACGATGCTCCAG       CCAGCGGCTGGC CGGGTAA GCGGGCCCCTGG       TGTCTTCCAGATAAC  53 81
 GF1_RS12690 NONE
 GF1_RS12695 NONE
 GF1_RS12700 2846064 .. 2846074 +  -5.4  -3.06796   GATATCCGGAGCCTG                 GAAC CGC GTTC                 TTCCCTCCAGTAGCA  49 179
        trxA 2852416 .. 2852435 +  -9.2  -3.06696   GCGGGACAGCAAGGC            GGACCGGC CAAG GCCGATCC             TGTCTTCCGCCGGCA  66 142
        trxB NONE
 GF1_RS12750 2854599 .. 2854616 +  -3.3  -2.61004   GGGCAGCCGGTCACA             CACTGCC CACA GCCGGTG              CATTTTTCCGGATCA  40 220
        larB 2857765 .. 2857781 +  -5.7  -2.71712   GTACGCTGCGCTCAC              CCGGTCC CGG GGGCAGG              ATTTGCCGACAAAAA  48 244
        secD NONE
 GF1_RS12780 NONE
 GF1_RS12785 NONE
 GF1_RS12790 2862846 .. 2862856 +  -6.8  -4.39226   AGCAGAACCTGCTAT                 CCTG CAA CAGG                 TTGTTTTGTAATTGT  75 205
 GF1_RS12795 2864758 .. 2864775 +  -3.3  -4.48072   CCCCGCCAGGGGTTT             CCAGCAG CAGT TTGCCGG              TTTTCTGGTGCATAT  66 281
 GF1_RS12805 2867854 .. 2867868 +  -5.6  -2.55545   GCCTTCACCGCCTCC               CGCAGA AGC TCAGCG               ATCTCTTCTTCACCA  46 131
 GF1_RS12880 2882963 .. 2882975 +  -9.1  -2.87132   GAGCGCCCAAGATCG                CCTGG TTA CCAGG                TATCTGCCACCACGG  65 212
 GF1_RS12885 2883882 .. 2883897 +  -7.6   -3.0464   AGTTTATGGTAGATA              TGGTCT CCTC AGACCA               TATTCAACCTAAATT  59 155
 GF1_RS12890 2884998 .. 2885029 +  -7.3  -3.27525   CTACGCCGGCTACTG      CCTGGCTCTCCTGT AAGAA GCAGG-GAGCCAGC      TTGACTTTGCCCCCA  59 10
        htpX 2885944 .. 2885999 + -18.6  -3.54307   TGTCCATGTAGAGCG CAACAAAAAAGCCCGCAGAAACCT CTTAGCCT GGGTTTCTGCGGGCTTTTCTTTTG TTTCCCCAGCGTCTT 100 30
 GF1_RS12910 2890634 .. 2890689 + -19.3  -4.46212   AGAGGTCATCAGAGT GAAAAAAAAAGCCCGCAGAAACCTT ATGCAA ACGGTTTCTGCGGGCTTTTCCTTTC TTTTCTCATCGCAGG 100 489
 GF1_RS12990 2906716 .. 2906746 +  -3.9  -3.14931   GGCTGCCCTCATTGC      GGGCGCCAGGA-CC AATG GGATCCTGGTCCGC       TTCATGGCCAGTGAA  47 65
 GF1_RS13040 2920697 .. 2920723 + -13.1  -5.28942   CAAGCTCGAGATGAA         GAGGTACATCC CCGGA GGATGTGCCTC         TTTTTCTTTGGCATC 100 152
 GF1_RS13045 2921588 .. 2921610 +  -4.1  -3.08798   TATTTTAACTGCCGG           CGGTTTTTG CCGGC CTGAAACCG           TGTTGCATAAGGAGT  46 33
 GF1_RS13050 NONE
 GF1_RS13055 NONE
        rnpB 2923611 .. 2923657 +  -8.7  -5.46629   TAATCACATTTTTTT GAGTGCAGGATAAATGAGGTC TGCGC GGCCGAGCTTGTCCTGCACTC TTTTTTTCACCTCTT 100 212
        ispD NONE
 GF1_RS13070 2926230 .. 2926244 +  -5.6   -2.7535   CCTCCGGATCTATCT               GCCGCA GGA TGCGGA               TGGTCTCTTCCCCAC  47 170
        purF 2934131 .. 2934141 +  -3.2  -4.87803   TTACTCTATCAGACA                 GCTT GCG GAGC                 TTTTATTTCCCCATA  71 186
 GF1_RS13095 NONE
 GF1_RS13100 NONE
 GF1_RS13105 NONE
 GF1_RS13110 2938432 .. 2938477 +  -9.5  -3.15861   CCGCAACCAGTAACC GGCAGGCCACCCGGACCGGAAC CAT GCTCCGG-CCGGGTGACCACCA TTCCTGAGGATGCTG  67 28
 GF1_RS13115 NONE
 GF1_RS13145 2945756 .. 2945791 + -14.7   -5.0538   CTCCGGCAAAAACAA    GCCACCTCTTCCTGC TGTCAT GCTGGAGGGGGTGGC     TTTTTTAGGATACGA 100 68
 GF1_RS13150 2948126 .. 2948142 +  -2.1  -4.11216   GCTGGGCCGTCAACG              CCCGCCT TAC AGCCAGG              TTTTAGCCATGAAAA  56 3
 GF1_RS13155 NONE
 GF1_RS13160 NONE
 GF1_RS13165 NONE
 GF1_RS13170 NONE
 GF1_RS13175 NONE
 GF1_RS13180 2955403 .. 2955413 +  -2.4   -2.6927   GGCCCTGCTCAAGGG                 TCCG GAA CGGC                 TGCTCTGTGCGGCCT  38 99
 GF1_RS13190 2955869 .. 2955879 +  -5.4  -4.72846   GAGTGTCAGCCTGGC                 TGAC AGG GTCA                 TTTTTGACTCTGTCG  75 149
 GF1_RS13195 NONE
 GF1_RS13200 NONE
 GF1_RS13205 NONE
 GF1_RS13210 NONE
 GF1_RS13215 NONE
 GF1_RS13220 NONE
 GF1_RS13225 NONE
 GF1_RS13230 2962496 .. 2962522 + -10.9  -3.91421   GCTGGAAGAAAGTCT         TTCCCGGCTCA AGACC TGACCCGGGAA         TATTTTATGTGATTA  86 7
 GF1_RS13235 2964105 .. 2964126 +  -2.2  -2.87051   GAAAAGCAAACCGGA           TCCGCG-CC GGAAA GGACGCGAA           CTTTCCTGCTCCAGC  41 39
 GF1_RS13240 2965885 .. 2965895 +  -4.6  -3.19463   GAGGGTGGAGATTCC                 TGGC CAA GCCG                 TTCATCCCTGATGAA  49 379
        lptD 2983238 .. 2983249 +  -5.8  -3.09516   TGGCCAATATCGGCA                GTCC GCTG GGAC                 TTGGCTGGTGAGACC  53 3
 GF1_RS13310 NONE
 GF1_RS13315 NONE
 GF1_RS13320 NONE
 GF1_RS13325 2987317 .. 2987365 +  -5.4  -3.62597   GCATGGAAAATGCAT GGTTATCCACGGCCGCGCTCCGGT ACGGC GCCGG-GC-CGGC-G-GGAAAACC TTGTTGGAGACTACC  58 45
 GF1_RS13330 2988276 .. 2988292 +  -5.1  -2.50074   ATGTAACTGTATCGG              TATACGG ATG CCGAATA              GTGTGTTGTAAACAG  47 99
 GF1_RS13335 2990460 .. 2990496 +  -3.8  -4.86731   CGCAAACCAGTCCGA   AGGACCAAGGGACAAGG ATGC CCTT-TCTTTTGGTTCG    TTTTCTTTGGGCAAG  73 226
 GF1_RS13370 2997113 .. 2997142 +  -4.2  -3.28924   TTCTTCCCATCCCGG       TCAAACAGGGCC AGCACC GGTCCTGATGGA        TTATAGGACCAGGTA  47 381
        ispH 3016446 .. 3016456 +  -8.2  -2.93572   CAACTCAACCTGTTC                 GGGC GTC GCCC                 CTTTCTGGGGTGCGT  61 493
        sfsA 3023109 .. 3023121 +  -5.5  -3.08679   CAGCCCGGCACAGAT                GGACT GCC GGTCC                TCTTCGGTGCGCAGA  49 480
        pilM NONE
 GF1_RS13530 NONE
 GF1_RS13535 3028590 .. 3028609 +  -4.9  -3.70902   GGGACGTCCGGCGTA            CCCGGTG AGCAGC CACCGCG             TTTCCGTGTCCACGG  55 95
 GF1_RS13540 NONE
 GF1_RS13545 NONE
        mshL NONE
 GF1_RS13555 NONE
 GF1_RS13560 3033837 .. 3033862 + -14.8  -5.56263   TGCAAACAAAAAAAA         GCTCCTGCAG ATCGCG CTGCAGGAGC          TTTTTCTTTTGTGAT 100 63
        glyQ 3041427 .. 3041454 +  -3.3  -4.27617   ACATCAACCACCAAC        CAGGAGAGGACG GCCAA CGTCC-CGCCAG        TTTTCATGCAGTGTG  60 261
 GF1_RS13595 3041779 .. 3041796 +    -7  -2.55203   ACAAAGCCGCCTGAA             CAGACC TGCACC GGTCTG              CCTGTTTTTTGTTTT  52 27
 GF1_RS13600 3043247 .. 3043266 +  -8.5  -2.86259   TGTCGGAGCAATGCT            GGCCGCC CTCATC GGTGGCC             TGATATTCTTCACTC  61 168
 GF1_RS13615 NONE
 GF1_RS13620 3049698 .. 3049718 +  -6.8  -3.62597   TCCTTCTCTGTGGCG            GAAGCGCT ATGGG AGCGCCTC            TTCTTACCGCCTGCA  63 92
 GF1_RS13625 3051322 .. 3051359 + -11.5  -6.17292   AGGAAAAATCAGGGA   TCCTCGGATCAATAA CTTTTTGT TTATTGGTCCGGGGA    TTTTTTTTTGCCTTT 100 376
 GF1_RS13630 3053677 .. 3053709 + -23.7  -3.41745   GTACCTATCCGGACA      GGTTTTTTTCGGGGC ACA GCCCCGAAAAAAACC      TTCATCTTCTGCCCG 100 238
 GF1_RS13635 NONE
 GF1_RS13640 NONE
 GF1_RS13645 3056166 .. 3056180 +  -2.8  -2.64962   TATGAAAAATCCCGG               TAAGGA TAC TCCTCA               ATTACTTCCTGCTCT  40 23
 GF1_RS13650 3058270 .. 3058301 + -12.9  -2.53747   CCTCCATACATACTA      CCCGTGGCGCCGC CGTTCT GCGGCGCCACGCC       ATGTTCTACCCATTG  80 53
 GF1_RS13655 NONE
         pyk NONE
        nikR 3063516 .. 3063538 +  -4.1  -3.15047   GCACCGGAAAAGCTC           TCCGGTAAT AAATA ATTCCCGGG           TAATATTTTTTTGCC  47 18
        cbiM NONE
 GF1_RS13675 NONE
 GF1_RS13680 NONE
        cbiQ 3066595 .. 3066614 +  -2.1  -3.69323   GGTGAGGTTGACACC            TTCATCC ATCGAA GGCTGAA             TTTCAGTGGTAATCA  49 200
 GF1_RS13695 NONE
 GF1_RS13700 NONE
 GF1_RS13705 NONE
 GF1_RS13710 NONE
 GF1_RS13715 3073088 .. 3073111 +  -3.7  -3.29511   CCTGATGAGCCTGTG          CCAGCACCG CAGGGC CCGTGCCGG           TTCTGGCAGGGTCCA  47 370
 GF1_RS13725 NONE
 GF1_RS13730 NONE
 GF1_RS13735 3075356 .. 3075407 +  -6.6  -2.52834   CCGAAGAAGTGGCCA GCCCATGAGTGAACCATGGCGACT TGCCCT GGCCGCCGTGCT-CGCTC-TGGGC CTTCATGGTGCGGTC  52 18
 GF1_RS13740 NONE
 GF1_RS13745 3077719 .. 3077736 +  -7.7  -3.34398   TGGTCTTGACCAGCG             GCC-GGAG CTC CTCCAGGC             TCTTTCCGGCAAAGA  61 262
        phnC 3085464 .. 3085475 +  -7.2  -5.26316   GGTTTCAGGTTCTGT                CCCG CCAG CGGG                 TTTTTTGTAACCTCA  95 44
        phnD 3086419 .. 3086454 +  -8.4  -4.18018   CAGCGGTGTATACCC    GGTCTGTTTTGTCC ACCCCTCC GGGTGAAACAGACC     TTTTCCCTGAACCCG  78 49
        phnE NONE
 GF1_RS13795 NONE
 GF1_RS13800 3088438 .. 3088448 +    -4  -2.69471   CAACCAGAGTGGAGA                 TCAT CCC ATGA                 GTTATGTGGCCATCA  43 15
 GF1_RS13805 NONE
 GF1_RS13810 NONE
 GF1_RS13815 NONE
        phnL NONE
 GF1_RS13825 NONE
 GF1_RS13830 3093654 .. 3093688 +  -9.2  -3.28791   CCGATCCGCGCCGCC    CCGGCGGCCGGAAAC CTAAGA GCATCCGGCC-CCGG     TTGTCAAGCAGGCGT  69 7
 GF1_RS13850 3100002 .. 3100024 + -16.3  -5.24129   ACAAAAACGACAAAA           GCCCGAGGG AGATC CCCTCGGGC           TTTTTTATGCAAACA 100 73
 GF1_RS13860 3100508 .. 3100528 +  -4.8  -5.92399   ACCAAAAAATTTAAC           T-GCCACAA TGAA TTGTGGCCA            TTTTTTGTTTTATTC 100 37
 GF1_RS13875 3103688 .. 3103731 + -14.8  -4.56775   AAAAAATTCCTTTTT TCAACAGATTAGGCGGAAAA ATTT TTTTCCGCCTGATCCCTTGA TTTTTCAAAAACCGT 100 70
       groES NONE
        groL 3105896 .. 3105928 + -18.6  -4.52589   ATGCTGTGATTTCCA      GTCCTTTTCCTGCC CCTGC GGCGGGAAAAGGAC      TTTTGTCTCCAGGGA 100 57
 GF1_RS13890 3106137 .. 3106160 + -13.8  -5.65496   CCGGTTTCCATAAAA          CCCCGAGTCC TTGT GGACCCGGGG           TTTTTCTTTTTCCTC 100 57
 GF1_RS13895 3107342 .. 3107378 +  -5.8  -4.08948   CATGCCCTGCTGGTT   CCTGCCCAGGCTGTG-GT CAG ACGCCCGGCC-GGGGAGG   TTGTTTATCAGGTTG  68 451
 GF1_RS13905 NONE
 GF1_RS13910 NONE
 GF1_RS13915 NONE
 GF1_RS13920 NONE
 GF1_RS13925 3113804 .. 3113823 +  -2.8  -3.16055   CCTTTTTGTCTGCCT            GATCTGTC AGTC GGAAGATC             TTAATGACCCGTTTA  45 156
 GF1_RS13930 NONE
 GF1_RS13935 NONE
 GF1_RS13940 NONE
 GF1_RS13945 3116552 .. 3116567 +  -4.7  -3.75153   CGGGGAATTACGCCG              GGTCA TTGCCT TGACC               TTTGCCTTGAAAGAC  56 520
 GF1_RS14005 3138877 .. 3138911 + -10.7  -3.13403   GCTCCCGGTTTTCCC    GGACCAGCTCCA-CGG TTTG CCGCTGGAGCTCGACC     TGTTCCTCGGCCGCC  66 334
         def NONE
         fmt NONE
        larC NONE
 GF1_RS14065 NONE
 GF1_RS14070 3151909 .. 3151920 +  -3.6   -5.1861   TGGCTTTCAGGGCTC                GCTG GATT CGGC                 TTTTTTCATCGTCAC  84 138
 GF1_RS14080 3154950 .. 3154988 + -27.6  -3.92542   GATTCTGCCGAAATA   CAACAGGCCCTGCTCCGC GAT GCGGAACAGGGCCTGTTG   TTGTTTGAACATGCA 100 49
 GF1_RS14110 3161530 .. 3161546 +  -3.6  -3.60475   GACCTGTCCCATTGA              CAGCCG GCCTG CAGCTG              TTTACAATCCAGGTT  53 331
 GF1_RS14120 3162108 .. 3162153 +    -4  -2.53876   CCCCTGATCCACACC TCCGGGAGGT-CGGGCCGGACAC GGA GTG-CAGGGCTGTGCCTCC-GGA TCAATTCAAGTCAAG  42 34
        amrA 3162853 .. 3162870 +  -4.1  -2.57463   GAAAACCGGTAAGTA             CGGA-CCG GAA CGGATCTG             CTTATGAAGGAAATT  43 29
 GF1_RS14130 3163543 .. 3163558 +  -3.2  -3.46982   CCCCCCACCCGTGAG              GAATGC GCAT GCAGTC               TCTTGTTGATATCCG  49 68
        bioB NONE
 GF1_RS14140 NONE
 GF1_RS14145 NONE
        bioA NONE
 GF1_RS14155 3169041 .. 3169056 +  -6.1   -3.9243   TCGATAAGGAATATA              CCGTC ACGGAG GACGG               TTATTTCACAGGTTC  65 370
 GF1_RS14160 3170646 .. 3170660 +  -7.1  -3.05463   AGAATATCAGCATGA               TCGGC TGTTT GCCGA               TTACCTGGCCCAGAT  54 481
 GF1_RS14185 3174597 .. 3174636 +  -2.8   -4.2354   GTCGTCAGGGACGGA  TCGCAGCCGGGGGTTTTCA TGA TGAAC-CCTCCGGGTCTGA  TTGTTTTCCCCTTTG  60 97
 GF1_RS14200 3177888 .. 3177929 +  -6.6  -5.14563   AAGCCTGCCCGCAAA GGGTTGTTCTCCTCCGACAC GTCC GTGCCTGGGGAG--CAACCC TTTTTTCATGGCAGC  90 147
 GF1_RS14205 3179166 .. 3179180 +    -5  -3.37755   GCTTCCCGGGAAAAA               TATTGC AAT GCGATA               TATTTGAAGATATAT  51 159
 GF1_RS14210 3179623 .. 3179660 + -15.9  -2.52464   TTATCCGGGAATGTA   TGCACATCGATATATCT TTTT AAATATATCGATGTGCA    TACATTCCCGGGCAG  93 61
        modA NONE
        modB 3181455 .. 3181465 +  -2.4  -3.83568   CTGAAAAAGAGGTGA                 GCCG GTG CGAC                 TTGTTGTGGATGTGA  51 26
        modC NONE
 GF1_RS14230 NONE
 GF1_RS14235 NONE
 GF1_RS14240 3185042 .. 3185054 +  -3.3  -3.65812   GTCGGCCAGCTTCAG                GGCCA TCT TGGCG                TTCTGTTCCACCAGC  52 150
 GF1_RS14270 3190807 .. 3190825 +  -7.4   -3.6682   AGCACCGAAGCTGCC             CCGGCA CCCACAA TGCCGG             TTTCAATCCATGCCC  66 61
 GF1_RS14320 3204435 .. 3204450 +  -4.7  -4.63218   TTTATAAAAAAAATG              GTTCG CCACGT CGAAC               TTTTCTTGACAAGCC  72 306
 GF1_RS14325 3204999 .. 3205018 +  -2.8  -4.59109   TTTTTGACAGCCTGG            CAATCGGG ACGT TCTGGTTG             TTTTTCAGGACTATC  69 219
 GF1_RS14355 NONE
 GF1_RS14360 3215886 .. 3215906 + -11.2  -5.34381   AGTGCAGGCAAACAG            TACTGCCC ATGGG GGGCAGTA            TTTTTATTTAACTTT 100 362
 GF1_RS14365 3217785 .. 3217818 + -13.9  -2.72144   CCTTTTCCCATTTTG     CCAGGACAGGGCC CTCTCTGT GCCCCTGTCCTGG      ATTTGAAAGAGGTAG  85 93
 GF1_RS14370 3218143 .. 3218168 + -16.1  -6.02919   GGAAACCAGGTCTTG         GCCGGGGCTGC AGAG GTGGCCCCGGC          TTTTTTTATTTCTGA 100 46
        guaB NONE
        guaA NONE
 GF1_RS14390 NONE
 GF1_RS14395 3223469 .. 3223482 +  -3.7  -2.67255   GCCTGCCATATCGAG               GCCCG GTAG CGGGA                GTTGCTCTTCTCTTC  43 17
 GF1_RS14400 3224212 .. 3224224 +  -3.3  -4.13652   TTTTCATGACATTTT                GACCT AAA AGGAC                TATTTTTGTCTGCTT  58 32
 GF1_RS14405 NONE
 GF1_RS14410 NONE
 GF1_RS14415 NONE
 GF1_RS14420 NONE
 GF1_RS14425 3228294 .. 3228324 +  -7.5  -3.35867   AACCAGACATTTTCT      GCGATGGGC-ACCC ATCA GGGCAGACCATCGC       TTCCTTCCACGTTCC  62 48
 GF1_RS14430 3229039 .. 3229059 +  -7.5  -2.72436   TCGACACCGGGTTCG            GCCATGAGG TGC CTCCATGGC            TAAGTTTGATTATGA  57 19
 GF1_RS14435 3229560 .. 3229574 +  -2.7  -2.53715   TATCTTTTCCCTGGA               GCGGC TGCCT GCCAC               CTTCATCGTGCTCGG  40 114
 GF1_RS14445 3232191 .. 3232213 +   -22  -6.06723   CTCCTGCCAGCAAAA           GCGGCGCCGG TTA CCGGCGCCGC           TTTTTTTTTCAACCA 100 44
 GF1_RS14450 NONE
 GF1_RS14455 3233731 .. 3233743 +  -3.3  -2.83271   CCAGTCCTCCGCACT                CGGGA GCC TCCCA                TGATTATCGGCATCC  41 10
         ald NONE
 GF1_RS14465 3235581 .. 3235616 +   -14  -2.76696   ATACGACCGCCAGGG    CCTGTTCCCTGTCCCG GAGC CGGGGCAGGGAACAAA     ATTCTTCGCGGCAGG  85 40
         tgt NONE
        yajC 3240907 .. 3240939 +   -17  -5.22794   AAGAGAGTTTCCAGA      GGCCGGACGACTGC CAAGA GCAGTTGCCCGGCC      TTTTTTCATGGTTCT 100 78
 GF1_RS14490 3242056 .. 3242080 +  -2.8  -3.16564   ATGGAGCGGAGTGTG         GC-GGATCACC TGCA GGTGGTGCAGC          TTGATGGCATCGAGC  45 290
 GF1_RS14515 NONE
 GF1_RS14520 3247356 .. 3247377 +  -2.3  -2.86202   ACTACTCCCTAAATT           GAG-TATCCA GTA TGGATATCCC           CTATTTTCATGTCGA  41 66
 GF1_RS14525 3248377 .. 3248391 +  -2.8  -3.36515   ACTGTAGTACACGAG               TAATGG TAA CCACTA               TCTTTCACCATGCGG  47 253
 GF1_RS14530 3248790 .. 3248818 +  -2.9  -4.11371   CCTCGCTCCTCTGAC        AGACCAGTGAGAG CCG CTCGCACAGGACA        TTTTCAGCGGTCTTG  58 27
        mnmA NONE
        mtaB 3251423 .. 3251437 +   -10  -2.57132   GCGAGCATTTTTCAT               TGCGTC GGT GACGCA               GTTATCGGGCGAAAA  66 124
 GF1_RS14545 NONE
        recA 3254059 .. 3254088 + -16.5  -5.61881   AAAGCAAAATAAAAA       TCCCCTGCCAGAG AGAT CTCTGACAGGGGA        TTTTTATTTTTAAAA 100 79
 GF1_RS14580 NONE
 GF1_RS14585 NONE
        ftsH NONE
 GF1_RS14595 NONE
 GF1_RS14600 3262469 .. 3262505 +  -8.6  -2.66602   GGTTGAAACAGCTCT   TTCC-CGCCCTGGGCTG ACCC CGGCCACGGGCGTGGGA    TACATTATTCAGTCA  59 9
 GF1_RS14605 3263301 .. 3263313 +  -9.1  -3.53012   TGAACCTCCCTGTCA                GCCAG GAC CTGGC                TTTCCCGGAAACGAA  66 91
 GF1_RS14620 3265112 .. 3265137 +  -2.5  -4.07455   CCAGGATATATCTTT         TCTATAACCTG GACG CTGGTTATCGG          TTTATCCTATTGATC  56 101
        sbtA NONE
 GF1_RS14630 3265547 .. 3265572 + -14.8  -3.97406   AGAAAACAAGAGAAA         GCCGGTAACC CATTGA GGTTACCGGC          TTTCTGCGCTTTTGC 100 78
        sbtM 3267147 .. 3267159 +  -3.3  -3.38046   TGATATCTTCACCGA                GTTGG ACC CCTAC                TGTTTCAGATAACAC  47 1
 GF1_RS14640 NONE
 GF1_RS14645 3268014 .. 3268028 +    -7  -5.35224   CCGATTTGCCAAGGC               AGGGGC TTG GCCCCC               TTTTCTTTTTCTGCA  95 113
         dtd 3268531 .. 3268559 + -10.3  -2.71731   AGCCGGCAATGTGAT        CCCTTCAGGGGAT ACC ATCGCCTGAAAGG        TGCTTCCGGCGTGCA  67 39
 GF1_RS14655 3271889 .. 3271908 +  -2.8  -3.04398   CCCGGAGATGATGCA            TTTCCACG ACTT CCTGGAGA             ATTTTGAGAAAAAGA  43 304
 GF1_RS14665 3272728 .. 3272763 + -13.2  -3.66178   GCCATTGCGGGCTGA    GGCGTTTCAGCCCCTC AGGT GAGGGGCCGGGACACC     TTTGGCGTTGCCAGG  93 26
 GF1_RS14670 NONE
 GF1_RS14675 3274959 .. 3274986 +  -8.3  -3.20028   AGTGCAATGAAATAC        TCCGACGCCAG CTGTTC CCGGCGACGGA         TACTTTTCTGGTAAC  63 90
 GF1_RS14680 3276000 .. 3276023 + -18.2  -5.60993   TTGTCCCCGGATGGA          GAGAGGCGGG AATG CCCGCCTCTC           TTTTTTTGTCCAAAA 100 61
 GF1_RS14700 3280099 .. 3280111 +  -6.9  -2.77013   ACACATGGCGGAGTC                CCCGG TAA TCGGG                CTTATTACAAAGATG  51 441
 GF1_RS14710 3282480 .. 3282510 + -13.3  -3.20029   CCGGAGAAATGAACA       GGGATAACACCGC CTTAA GCGGTGATGTCCC       TCTCTGTTTACATGC  85 93
        sucC 3283952 .. 3283987 +  -9.6  -2.77523   TGTTCAACACCGTGC    GCGACGCCGTGGCCGCC ACC GG-GGCCAATGCTTCGC    TGATCTTCGTGCCGC  63 213
 GF1_RS14725 NONE
 GF1_RS14730 NONE
        meaB NONE
 GF1_RS14740 3288018 .. 3288032 +  -5.6  -3.40403   AAAAACACAAAGAAT               CAGCAG ATA CAGCTG               TTATGCTCAAAAAAA  54 72
         mce NONE
 GF1_RS14750 NONE
        accC NONE
 GF1_RS14760 3293020 .. 3293030 +  -8.2   -2.8838   CTTTGAGCGCTCGCG                 GGGC CCT GCCC                 TGATTCAGTTTTTTG  61 149
        cydB 3294267 .. 3294296 + -15.1  -3.41878   GTTTTCAGGTGGCAC       CGCGATGGTATCC CCTC GGATACCATCGCA        TTCTCCCTTCCCCGG 100 52
 GF1_RS14770 NONE
 GF1_RS14775 NONE
 GF1_RS14780 NONE
        cydB 3298038 .. 3298048 +  -4.6  -4.75219   ATAATATCTTCAAGT                 CTGC CGG GCGG                 TTTTCTTCCTGCTTC  75 202
 GF1_RS14790 3300608 .. 3300622 +  -2.1  -4.11404   TTGACCCCTTCCTCC               TTGCA GCCCG TGCAG               TTTATATCGTCTACC  59 248
 GF1_RS14850 3314334 .. 3314362 +    -3  -4.65895   ACCCCCCTGAAAAAT        CCATCCGGCAGC ATGGG GTTACCGGGTGA        TTTTTCGATAAACGC  68 101
 GF1_RS14855 3316055 .. 3316086 +   -13  -3.39908   CGATGAAAGCAAAGC      CCGGAATGTGGAGC CCTG GCTCCCTGTTCCGG       TATATTTTCCGGAGG  89 59
 GF1_RS14860 3316333 .. 3316366 + -18.9  -4.37092   AATTATCACAAACAA     CACCCCCTCCGGCAT TTCC GTGCCGGAAGGGGTG      TTTTCTCCCGCGCCT 100 52
 GF1_RS14865 NONE
 GF1_RS14870 3317501 .. 3317513 +  -4.8  -3.25823   TACGCTAAGGAGGAG                CCGT CGGAA ACGG                TTCCTCTCCCGGAAC  49 33
 GF1_RS14875 NONE
 GF1_RS14880 NONE
 GF1_RS14885 3322167 .. 3322197 +    -9  -3.02144   CACACGCTCAAGGAC       GGGATCACACTG CAAAACA CGGCGTGATCCC       TCTTCAGGGACATCC  66 43
 GF1_RS14920 3332198 .. 3332214 +  -4.4  -2.99428   CACAAGGGACTGGGG              CAGGTT ATCCA GACCTG              TATAATTACTTGTTA  48 246
 GF1_RS14925 3334057 .. 3334072 +    -6  -4.33165   AATCAATTAACTTGA              CCCGCG TGCA CGCGCG               TTTTCCTGAGTTTCC  72 83
 GF1_RS14930 3336210 .. 3336227 +    -4  -5.20606   TTGCGGTCATCTCCG             GACCGG GGTTCA CCGGAC              TTTTTCTTGCTGTTT  84 272
 GF1_RS14940 3339813 .. 3339863 +  -6.7  -3.29144   CCTCGGAGCGGACAA GGTGTCCGGCCGAGAATGGGC CCTCAAATT GCTCGTCGGAGGCCGGACACC TTGTCCGCGGACTCA  59 171
 GF1_RS14955 3342619 .. 3342630 +  -2.2  -3.56361   ATATCTTTACTGCGC                CAGG CCAA TCTG                 TTACCTTTTTTGTAT  47 170
 GF1_RS14960 3343717 .. 3343731 +  -9.2  -2.98282   CGAGAACAAGGGCCT               GCGGGG ATC TCCCGC               TGTCTCGTAGTTGAT  65 445
        istA NONE
        istB 3348957 .. 3348973 +  -2.2  -4.46926   GGTGGGTCAATTTTT              TTGTCC GGGTG GGTCAA              TTTTGTCGTCCGGTA  63 153
 GF1_RS14995 3357856 .. 3357880 + -11.3  -3.03771   CCCGGGCGGCCGCGG          GGGGCCGCCCT ACA GGGGCGATCCC          TGTTCGAGGGTGTGG  75 289
 GF1_RS15020 3364779 .. 3364798 +  -7.2  -2.71011   TTCAGGGCTGACAGC            GGTCG-CAT CCG ATGACGACC            TCATTGCACAAACGT  53 30
 GF1_RS15025 NONE
 GF1_RS15030 3366860 .. 3366875 + -10.4  -2.57211   GCAACGTCATCGGCC              GGCAGC CACA GCTGCC               CTTCTGGAGGACCAT  66 198
 GF1_RS15035 3367858 .. 3367878 +  -3.9  -3.97385   TCTTCTTTCTCCTGG            CCGTGGT CCTGGCC GCCGCGG            TGTTCTTTTTCTTTT  58 41
 GF1_RS15040 NONE
 GF1_RS15045 NONE
        bioC 3371393 .. 3371428 +  -7.4  -2.70932   AAGGTGTCGAGATGA    C-GCCGGGTCATGGGCG ACA TGCCCAGGTGCCGGCCG    TGGTTGCCCACCAGC  57 430
        bioD 3373103 .. 3373113 +  -6.8   -3.3062   ACCTGAGAGGCAGTT                 CAGG AAC CCTG                 TTGCTGCTCTTTCCG  59 40
 GF1_RS15075 3374518 .. 3374540 + -14.8   -6.0458   TGTTCTCTCCCTCTC           CGGCTGCGCC CTC GGCGCAGCCA           TTTTTTTTGCTTTCT 100 75
 GF1_RS15080 3376246 .. 3376297 + -10.4  -2.61027   CCTGCTGCGTCACAG CTTCAAAAAGAGTCCTCGAAATAT TTCA ATATGTCTGCGGCTCTTTTTGAAG CTGTTCCTTTCATCC  66 129
         pal 3379739 .. 3379767 +   -19  -5.72207   TCTCCTTTCTGTAAA        GGGAGAAGGCAG CGCGA CTGCCTTCTCCC        TTTTTTTAGTTTGCC 100 56
        ltrA 3381821 .. 3381865 +   -10  -2.75832   GTACGTACGGTTCTG TGAGAGGGATGAGGCAAGCT TAATT ACCTTGCCTCACCCTACTCG ATTGCTGTTTTTACA  67 74
 GF1_RS15110 NONE
 GF1_RS15115 3383249 .. 3383289 + -17.6  -3.05384   CCCAGCCACTATAAT  ATCGCTATGGGGCCGGAG ATCCA CTCCGGTCCCATGGCGGA  TTCCGTCAGGAACAA 100 52
 GF1_RS15120 3384134 .. 3384152 +  -3.1  -3.54459   TCGGTTCTTTCCATC             CACGG TGCGGGAAC CCGTG             TTTCCGCACCGTTCA  49 93
 GF1_RS15125 NONE
 GF1_RS15130 3384808 .. 3384833 + -21.9  -3.07443   CGAAAGCCCACCGGG         GCCCCGGGCCT TGCC AGGCCCGGGGC          TTCCGTCCCCTGTAA 100 42
 GF1_RS15135 NONE
 GF1_RS15140 3386514 .. 3386525 +  -2.2  -3.41878   GGCAAGGAAGTGGAA                TCGG TTAT CTGA                 TTATCCATTCAACAA  45 14
 GF1_RS15145 3386968 .. 3386994 + -23.8  -5.80817   CCGATTCTCCCCCCC         GCCGGGGTGTCC ACC GGACACCCCGGC         TTTTTTTCTCTTCCC 100 56
 GF1_RS15150 NONE
 GF1_RS15155 NONE
        ndhC NONE
 GF1_RS15165 NONE
 GF1_RS15170 NONE
 GF1_RS15175 NONE
        nuoH NONE
        nuoI NONE
 GF1_RS15190 NONE
        nuoK NONE
        nuoL NONE
 GF1_RS15205 NONE
 GF1_RS15210 3400533 .. 3400559 + -15.1  -5.00616   TTTTCCTTCTTGGGG         AGCGGCCAGCC ATAGG GGCTGGCCGCA         TTTTTTGAAACAGGG 100 78
 GF1_RS15255 3409705 .. 3409718 +  -3.8  -3.42809   CCAATGGCTGCTGAC               CCGA ATAAAC TCGG                TATATTTGTTACCTC  51 78
 GF1_RS15260 NONE
 GF1_RS15265 NONE
 GF1_RS15270 3410626 .. 3410646 +  -6.8  -5.75478   TGTATGCAGAAAAAA            CCTCTGTC CAGGC GGCAGGGG            TTTTTTTGTGTCATT 100 61
        dnaN NONE
 GF1_RS15290 NONE
 GF1_RS15295 3414578 .. 3414610 +  -5.8  -3.44792   GTGTTTATATTGAAT     GGATGACTTGAAAAA GAAT TTTTTCAAGG-ATCC      TGTATTTTACATTGG  58 118
        gyrB 3417036 .. 3417050 +    -5  -2.79302   ACCACGCCCTGGAGG               TATCGG AAC TCGATA               TCTGATGGGACTGGT  46 6
        gyrA NONE
 GF1_RS15310 3420642 .. 3420692 +  -7.6  -3.88029   AAGGAAGAAATGGAA ATGGGGTGAGTATG-GGCGAC ACAGTAGCCC GTCGCCTCGTACCCACCCCGA TATTTTCTCTACCCT  72 17
 GF1_RS15330 NONE
 GF1_RS15335 3423782 .. 3423807 + -13.3  -5.34632   GCCATGATATCCAAA         CCCGCTTTTCG TTCT CGAGGAGCGGG          TTTTTGTATTTTGTT 100 37
        nadB 3429862 .. 3429887 + -16.3  -3.54424   GCGCCTTAAAAAAAA         CCGGTTATGAC ACTG GTCATAACCGG          TTTAAACGAATGGCG 100 418
        rdgC 3431042 .. 3431052 +  -4.6  -5.14563   CCGGCTCCTCCCGAG                 GGGC CTA GCTC                 TTTTTTCATGCGGAA  81 112
 GF1_RS15390 3431675 .. 3431688 +  -8.1  -4.07568   GCCACAGCGTGATCC               TGGCC CCCC GGCCA                TTTTGCCCACAACAG  74 29
        gatB NONE
        radC NONE
        hemW 3435197 .. 3435212 +  -6.2  -2.90723   TGTTTCTGCAGTCGG              TACCTT GCAA AAGGTA               TATGATTACAGGTAG  52 64
        purL 3439209 .. 3439233 +  -4.9  -5.76949   TGGAAGGGTAAGTCG         C-GCCCGGGC AGGGTG GCCCAGGCTG          TTTTTTTTGACAGTC 100 30
 GF1_RS15415 NONE
 GF1_RS15420 3442171 .. 3442196 +  -2.5   -2.6563   AAATCGACCAGGTTC         TCAGCGAAGAC AGTG GTCTGTTCTGA          TACGTTATTGCCGCC  38 0
 GF1_RS15425 3442661 .. 3442691 +  -8.4  -5.37593   CCCGGACGTTTCGAA      CGCGGCGACATGGA CTGGT TCCATG--GCCGCG      TTTTTTAGTTTGCCC 100 50
        ltrA 3444742 .. 3444788 +  -6.5  -4.64383   CGTACGTACGGTTCT GTGAGAGGGATGAGGCAAGCT TAATT ACCTTGCCTCACCCTACTCGA TTTTCGTTTGTACTT  77 73
 GF1_RS15440 3446843 .. 3446876 +  -8.7  -4.90013   GGTGGTATTCTCGAT     GGCGCGGCGCAGGGCC TTG GGATCGGTGCCG-GCC     TTTTTCATTGCATTG 100 474
 GF1_RS15555 3471067 .. 3471088 + -10.8  -4.53303   CTGGTGGAATTTCTG           CCGGGGGC CTTCGC GCTCCCGG            TTTTATATGAAAGTC  95 49
 GF1_RS15560 3472352 .. 3472368 +  -5.1  -2.89881   TGAAGGTGTCGGCCT              CACTTGT TGC ACGGGTG              TCTGTGGCCTGGATG  49 122
 GF1_RS15565 NONE
 GF1_RS15570 3473717 .. 3473729 +  -6.3  -3.54653   TGCCCGGAGGATACA                CATGT GTA ACATG                TTGTATAATCAAGGT  58 58
 GF1_RS15575 NONE
 GF1_RS15580 3476436 .. 3476449 +  -2.3  -4.55287   TCATCCTGGTCCGGA               GGTCA AGCA TGTCC                TTTTCTATGGCTGCC  64 305
 GF1_RS15595 3479433 .. 3479459 + -21.6  -4.62302   CTTTATGCACCGAAC         CGGCCGGGCAGC CCT GCTGCCCGGCTG         TTTTTCCGCCTCTTG 100 57
 GF1_RS15600 NONE
 GF1_RS15605 NONE
 GF1_RS15610 NONE
 GF1_RS15615 3483659 .. 3483680 +  -3.6  -4.11216   TTTGCGGACAAAGGC           GGCCACGC CCATTT GTCTGGCC            TTTTCGGCGTCCACC  62 283
        phoU NONE
        pstC NONE
        pstA NONE
 GF1_RS15655 3493327 .. 3493367 +  -9.7  -5.24129   TACATAACCCGTTCA CCGC-GCCGCGTTCCTGCC CTTGT GGCAGGGG-GCGGCAGCTG TTTTTTGTCAAGACA 100 50
        pstB 3494365 .. 3494394 + -12.8  -5.60993   CCGGGTTCCCCAGAG       CCGGCACGCGCT ATTTAA GGCGCCTGCCGG        TTTTTTTGTCAAAGA 100 58
 GF1_RS15695 3501948 .. 3501979 +  -8.2  -3.14132   GACTCCGGGAAGAGG      CCCATTGATTAGAGT GAC GTTCTA-TCAATGGG      TTGATGACGCAGCGG  63 106
 GF1_RS15700 3503181 .. 3503193 +  -3.3  -3.31144   CGATTACCAGGTGCG                CAGAC GAG GTCGG                TTATGAACATGGAAA  47 7
 GF1_RS15705 NONE
         gpt NONE
 GF1_RS15715 3506433 .. 3506466 +  -6.5  -2.52676   GAAGCGTCAGGCGGC     CCGACAGGACAGTTC CCGG GGGCGGACCTGGCGG      TAAGTTCCCCGCCTG  49 158
 GF1_RS15725 NONE
 GF1_RS15730 3509506 .. 3509516 +  -4.6  -3.57462   AGCGTTGCGTTGGGC                 CGCC CGG GGTG                 TTTGGAGATGGCATG  55 344
        ltrA 3511292 .. 3511302 +  -4.6  -3.12668   GGACGCCATAAACCC                 GTCC CTG GGGC                 TTGACTGTGGCCATC  48 215
 GF1_RS15750 3517070 .. 3517098 +    -6  -3.45027   ACAAAAGCTTACCTT       CGGTGAC-CGG TTGGCGGT CCGGGTCGCCG        TATTTGATGGCAGAT  58 100
 GF1_RS15760 3519784 .. 3519816 + -12.7  -3.74626   AGCGCTTGACAAAAG      GGGATGCCGGCTCTC TTG GGGAGATGGTATCCC      TTTACCTGATTTCCT  91 67
 GF1_RS15765 3520446 .. 3520500 + -20.2  -2.82742   AATGAAACAGTGTTA CGATGAACACGAAGGGCACGAAGA AAAAAGC TGTTCGTGCCCTTCGTGTCCTTCG TGGTTCTAAGCGAGT 100 60
 GF1_RS15770 3521942 .. 3521971 + -16.4  -4.32857   GCAGCTGATGTTTGC       GGCCGCCCGGTG AAATAA TGCCGGGCGGCC        TTTCTCTTTCAAGGG 100 33
 GF1_RS15775 3524644 .. 3524687 +  -6.4  -4.57073   AGATCTGTTGTATGG CCCGGCAGTCCTCGGCCCGC ATGA GTCGGCTGCGGGTCTCCGGG TTTTTCAGCAGCCTG  78 84
        argB NONE
 GF1_RS15805 NONE
 GF1_RS15810 3530856 .. 3530878 +  -9.2  -4.42062   ATCCAGCCATGCTGG           TTTCGTTGCC CCT GGCGATGAAA           TTTCTTTGCAAAATC  86 123
        argF 3531961 .. 3531972 +  -2.2  -3.53091   CCACGGGCGGACCGG                CGGA GGAC TCTG                 TTTAGGCGACAGCAT  47 69
 GF1_RS15820 3533277 .. 3533289 +  -4.7  -2.91593   CTGAGCAGGAAGTAA                CCCCG TTC CGGAG                ATTTCTGGCCGGCTC  47 26
        argH NONE
 GF1_RS15830 NONE
        lysA NONE
        dapF 3537963 .. 3537974 +  -7.2  -3.52079   ACAAGGGAGAGCTGA                GCGC CGAG GCGC                 TTCTCTAACCTCTTA  61 6
        dapA 3538931 .. 3538980 + -12.1  -2.59564   GGGGCGAAAACAGAG GTACAGGCTGCGGGTTGTCTGTG GCGG CACGGGCAACCGGTGGCCTGAAG ATTATCAGGTACGAA  76 44
        dapB 3539842 .. 3539861 +  -8.5   -5.7946   TTTCCCGGCGAGAAA            GCCTGCC CACTGC GGCGGGC             TTTTTTTGTTGACGG 100 46
        folK 3540610 .. 3540626 +  -3.5  -2.57132   GAAGCCGGGCCAGGA              CCCGCCG GTC CGGGAGG              ATTCTGCCGGAAACC  43 149
 GF1_RS15860 3541031 .. 3541053 +   -17  -3.34398   AACAAAAAAAGCTGG           TCCGGCCCCG GCG CGGGGCTGGA           TATTTGACAAGGAAG 100 79
         fsa 3541724 .. 3541738 +  -4.3  -3.47773   GGAAAAGAGGCAGAA               GTAAG GGTGA CTTAC               ATTTTTCGATTCTTC  53 22
 GF1_RS15870 NONE
        pgsA 3543204 .. 3543216 +  -3.3  -3.32844   CCGAGAACCGTGGAG                GTGGT GAT GCCGC                TTGTCGCATGGACCG  47 233
 GF1_RS15885 3544025 .. 3544055 + -14.8  -5.64304   CCACCAAAAAAATCA       GGCTTTATCCCGGT AAT AGCGGGGTAAAGCC       TTTTTTGTTGTCTTC 100 38
        radA 3557863 .. 3557879 +  -2.1  -2.89055   AGAAGAGAAGAATGC              GTTGCGG GTC CAGCCAC              CTCTTTCTTGTTGCC  41 41
 GF1_RS15945 3558993 .. 3559008 + -10.4  -3.19602   AACCGGAGCCTTACC              TGGGCC GCAA GGCCCA               TCTTCGTCTGGGGCG  70 485
 GF1_RS15950 3562246 .. 3562259 +  -2.3  -3.14931   AGGACCCGCCGGGCC               CGGGT CAGG ACCAG                TTCCTCCACCGTGCC  41 359
 GF1_RS15985 3568558 .. 3568591 + -13.2   -4.2651   CGTCCCTGTACATAC     CGCAAGGAGCGTTC CTCTTC GGGCGCTCCTTGTG      TTGTTTTGGCTGTTT 100 47
 GF1_RS15990 3570185 .. 3570206 +  -5.1  -3.58037   TCAAGGGAGGGCCTG           CTGGGTCTT CATC AAGGTCCGG            TTTCACCAGTTCATG  58 257
 GF1_RS15995 3571083 .. 3571095 +  -6.2  -2.75712   AGAAAGGTCAAGGAA                GCGG ATCAG CCGC                TGGTTGGGTCCGTGG  51 50
 GF1_RS16005 3573484 .. 3573501 +    -7  -2.67992   ATCGCTGACCTGGAG             CAGGCT CTGGCC AGCCTG              TGATCTACTGATATG  52 5
 GF1_RS16010 NONE
        metW 3575299 .. 3575311 +  -3.3  -2.71712   GCTGGAGCGGCCCCA                CTGAC ATG GTCCG                GTTTCCAGCAAGAGA  41 22
 GF1_RS16020 NONE
        cysK 3577279 .. 3577303 +  -4.2  -3.28712   AGGGCGGATGGAACG         GCC-CCGGGTA GAGC TGCCCGACGGC          TTATAACAACAACAG  49 43
 GF1_RS16030 NONE
 GF1_RS16035 3578500 .. 3578520 +  -3.2  -3.94773   GGTCTGGTCCGGGCC           GCAG-CCGC TGAC GCGCTCTGC            TATTTTGTGTTGAAA  55 92
 GF1_RS16040 3579009 .. 3579047 + -13.3   -2.8547   TAGAGTTTTGTATCT  CACCCCCTGATCAGC-GTT GCC GGCTGCTGA-CAGGGGGTG  TCTCGTCTCCGCGCT  82 38
 GF1_RS16045 3580692 .. 3580725 +  -6.1  -2.91264   AAGAGAAGCTGACTT     TTTACGAGGTTCTCA TGAA TGAGAAGCTTGAAAA      TCTCTGCCTGCGCCA  52 172
 GF1_RS16050 3582071 .. 3582083 +  -3.4  -4.62069   CACATCCAGGAAAAC                GATC CAGCC GATC                TTTTTGAGATGGGCC  69 278
 GF1_RS16060 3583687 .. 3583719 +   -20   -6.2845   GACGGCCAAACGACA      TAGCCGCGACCGCA CTATT TGCGGTCGTGGCTA      TTTTTTTTTGTGATT 100 63
         icd NONE
 GF1_RS16115 3595885 .. 3595901 +  -7.9  -3.09492   CGGGGACAGGCTGTC              CCGCAAC CGG GATGCGG              TATTACCATTCCGGG   0 44
 GF1_RS16105 NONE
 GF1_RS16100 3591630 .. 3591649 -  -3.5  -2.89569   TTTGCAAATCAATTA            CCCGG CCATGGCACT CCGGG             AGCAGTCGCTGACCG  45 105
        bamA NONE
 GF1_RS16090 NONE
 GF1_RS16085 3587972 .. 3587996 -  -3.4  -3.67597   GGTGTCACCGAAGAA          GTCGAGCCGC ACCGG GCCGCTCATC          TCCGGCGAGGAAGGG  51 21
 GF1_RS16080 NONE
         mfd NONE
 GF1_RS16070 NONE
        yrfG 3583687 .. 3583719 - -17.8  -3.01001   GACGGCCAAACGACA      TAGCCGCGACCGCA CTATT TGCGGTCGTGGCTA      TTTTTTTTTGTGATT 100 475
 GF1_RS16055 3581549 .. 3581569 -  -5.3  -4.56597   GGGTTTCGGGAAAAA            CTCCAGCTC CAG GACCAGGAG            TCGGCGGGGCAGGCG  75 296
 GF1_RS15980 NONE
        rsmB 3564900 .. 3564926 -    -3  -3.34468   TGGTAAGCAAACATA        CGGCG--GACCC TGTCC GGGTCGGCACCG        TGGTATGGTGTTCAG  47 64
 GF1_RS15970 NONE
 GF1_RS15965 NONE
 GF1_RS15960 NONE
        pyrF 3561461 .. 3561471 -  -2.4  -3.01712   CCGCCTTTCGTAACA                 GCGG AGG CCGG                 ATCAGCCACGAAACC  40 508
 GF1_RS15930 3555301 .. 3555331 -    -6  -6.22802   GGGCACAAAAAAAAA       GCAGTGGTACCGCC AGA AGCGATCGCACCGC       TTTTTTCTTAACCCG 100 364
 GF1_RS15925 NONE
 GF1_RS15920 3551931 .. 3551942 -  -4.4  -3.21993   ATGGATAATACGTAA                TGTG GTGA CACA                 ACCTGGGCTGCACAC  49 302
 GF1_RS15915 NONE
 GF1_RS15910 NONE
 GF1_RS15905 NONE
 GF1_RS15900 3546805 .. 3546825 -  -3.9  -2.87132   TCTGTCTTCGATACA            CCGTCTGTC TTC GACACACTG            CATACCTCTTGCGGT  45 54
 GF1_RS15895 3545946 .. 3545956 -  -4.6  -2.66733   GTCGAAGTCAGACGA                 CCAC TCA GCGG                 ACCAGCATGACCGTG  45 19
 GF1_RS15890 3544719 .. 3544729 -  -5.4   -3.7795   GGAAATCGTATCAAA                 GTAC AGG GTAC                 GCACTCGATCGCTCT  61 122
 GF1_RS15880 NONE
        lptA NONE
        lptB NONE
        rpoN NONE
 GF1_RS15780 3524276 .. 3524296 - -11.1  -3.21199   TATCCATGAAGTCAA            GCGGTTCGG CAG CCGAATCGC            CATTGATGATTTCGG  71 332
 GF1_RS15755 3517240 .. 3517251 -  -2.2  -3.15544   GTCCATGCGCAGCAA                CGGA CGTC TCCA                 GCTGATCAATTACGG  43 31
 GF1_RS15745 NONE
 GF1_RS15740 3511147 .. 3511170 -  -3.7  -4.09685   CCGGATGCGGTAAAA          CCGCACGTC CGGTTC GACGAGGGG           GCGCTGTCCGCAATG  60 299
 GF1_RS15720 3506276 .. 3506296 -    -9  -3.10464   GGAGGAAGCTGAACA            GGCAAAGC TGCTC GCCTTGCC            CTGAGGTTATATCAC  66 153
        glpK 3498647 .. 3498673 -  -4.2  -3.08032   GTGCTGCGAAAATCA         TCGGCCCGACAC GGA GGGTGAGGCCGT         CTGTTGCATGGGCCA  46 165
        ugpB NONE
        ugpA NONE
        ugpE NONE
        ugpC NONE
 GF1_RS15665 3493933 .. 3493943 -  -6.8  -2.98223   CACTGACAGGACAGA                 GCTC GAC GAGC                 TGGTGGAGGTTTCCC  53 457
 GF1_RS15635 NONE
 GF1_RS15630 NONE
 GF1_RS15625 3485949 .. 3485998 -  -5.6  -2.82933   CGGGAAGGCAGGATA TTTCCTGCCAGCAACCCGGCAGA GAGTA TC-ACCGGATGGCTGGCGGGTAG CGGTTATCTTTTGAG  48 29
 GF1_RS15620 3483498 .. 3483519 -  -9.3  -3.72893   TATCCGTTCACGAAA           CGGCCAGGG AAGG CCACGGCCG            CTCTCGGCCCTGACA  76 60
 GF1_RS15590 NONE
 GF1_RS15585 3476356 .. 3476382 - -15.8  -3.59946   GTCGGAAGGAGAGAA         GGCCGGGGAGGA TGA CCCTCCCCGGCA         GCGGGCTCAGCGTTC 100 32
 GF1_RS15550 NONE
 GF1_RS15545 NONE
 GF1_RS15540 NONE
 GF1_RS15535 NONE
        nuoH NONE
 GF1_RS15525 3464772 .. 3464792 -  -5.3  -3.35088   AAAGCGGGTAATTAA            TGCCTCCGG TTC CGGGAGGGA            CCGGCGGAGAGCTTG  54 44
 GF1_RS15520 NONE
        nuoK NONE
 GF1_RS15510 3462416 .. 3462438 -  -3.4  -2.82519   CGATGAGACGAACGA           TCATGAGAGA ACC TCCCCGATGA           GCTGCAGGAACGGTT  41 3
 GF1_RS15505 NONE
 GF1_RS15500 NONE
 GF1_RS15495 3458759 .. 3458777 -  -7.4  -2.62263   ATCCTCTTGATATGA             TCATCAGG CCG CCTGATGG             TCCGGGCGGCCTTCG  56 58
 GF1_RS15490 3457312 .. 3457333 -  -4.4  -3.18728   ATGGTGAACAGGGAA           TTTCCAGG AATCCG CCTGGAAG            AACCGCTCCTAAAGA  49 34
 GF1_RS15485 3456253 .. 3456268 -  -5.4  -3.45023   TCAGCAGCAGGACAA              GGGA-GC GGT GCATCCC              GGTTACTTCTCCAGG  56 28
 GF1_RS15480 3455421 .. 3455443 -  -8.4  -3.13403   CTCGGTGCACGAACA           GTGATGCGGC TTG ACCGCATGAC           GACTGCAGGATTTAG  63 158
 GF1_RS15475 3454374 .. 3454384 -  -8.2  -3.07043   GCGATTATTTCAACA                 GCCC CCG GGGC                 CGGATAAAGAGCACC  62 4
 GF1_RS15470 NONE
 GF1_RS15465 NONE
 GF1_RS15460 NONE
 GF1_RS15455 NONE
 GF1_RS15450 NONE
 GF1_RS15445 3446356 .. 3446373 -  -6.9  -3.86897   GTCAGCTTTGACAAA             CCGCTGG TCAT CCAGCTG              GCTTTTCTCCGCTGC  68 363
 GF1_RS15435 3444505 .. 3444523 -  -5.2  -4.58283   GAAGCTGTGGAAAAA             GCCGTGCA GGC TACACCGC             AGACTGAGACAGCTG  75 283
 GF1_RS15380 3429969 .. 3429985 -  -2.2  -2.66634   GACCTGACTAGACGA              TGGGGA CGTGT TCCGCA              ATGTCTTTTTGGTGG  38 35
 GF1_RS15375 3429862 .. 3429887 - -16.3  -5.75342   GCGCCTTAAAAAAAA         CCGGTTATGAC ACTG GTCATAACCGG          TTTAAACGAATGGCG 100 36
 GF1_RS15365 NONE
 GF1_RS15360 NONE
 GF1_RS15355 NONE
 GF1_RS15350 NONE
 GF1_RS15345 NONE
 GF1_RS15340 3423782 .. 3423807 -  -8.9    -3.727   GCCATGATATCCAAA         CCCGCTTTTCG TTCT CGAGGAGCGGG          TTTTTGTATTTTGTT  72 107
 GF1_RS15325 NONE
 GF1_RS15320 NONE
 GF1_RS15315 3420644 .. 3420690 - -13.1  -2.95234   GGAAGAAATGGAAAT GGGGTGAGTATG-GGCGACACAG TAG CC-CGTCGCCTCGTACCCACCCC GATATTTTCTCTACC  82 41
 GF1_RS15280 NONE
 GF1_RS15275 3410467 .. 3410488 -  -9.5  -4.63527   TGACGATGTCAAAAA           GCTGGTTGAG ATC CTCAACC-GC           GACCGGGACGCCGAT  87 265
 GF1_RS15250 3407654 .. 3407684 - -15.5   -5.9873   GGAGGACAAAAAAAA      TCGCGGTACCCTGG AAAA CC-GGGCACCGCGA       TCCTGACGTTTTGTA 100 60
 GF1_RS15245 NONE
 GF1_RS15240 3405878 .. 3405898 -  -3.3  -3.86346   GCAGTGTCGCATAAA            TTTGTCCCG GTG CAAAACAAA            AAAACCACCGGTCGG  55 49
 GF1_RS15235 3404613 .. 3404624 -  -4.4  -2.64735   ACCTGATTCAGATTA                CTGT TTAT ACAG                 CGACTGGGCAGAAAG  45 11
        gatC NONE
        gatA 3402673 .. 3402715 - -16.5  -3.86346   CGATTTTCGGATAAA CCACGAAGGACACGAAG AAAAAATAA CTTCGTGTCCTTCGTGT TGATATGATCTGTCA 100 65
        hisC NONE
         cmk 3400234 .. 3400252 - -11.6  -3.16564   GTTCTATCTCATCAA             GGCGGCGC TGG GCGCCGGC             TACACCGGGACGGTC  69 422
 GF1_RS15095 3377934 .. 3377957 -   -16  -4.11623   GATTATGAAACGAAA          TGGCCGGACC TCAC GGCCCGGCCA           GGAAACTGCTCGGCA 100 49
 GF1_RS15090 NONE
 GF1_RS15085 3376113 .. 3376135 -  -9.8  -3.48395   ATTTTTGCCACAGAA           CCGCTGAACC TGT GGTGCAGCAG           GTATTAGAGAGTGTC  74 249
        bluB NONE
 GF1_RS15065 3372597 .. 3372616 -  -7.1  -3.15861   GACCAGTGGGACGAA            CAGGGGC TGACCT GCCCCTA             CTGCTTTCCCTTTCC  54 511
 GF1_RS15055 3370858 .. 3370874 -  -5.7  -3.02263   AGACCGGGGTCAACA              GCGTGCG CTC CACCCGC              TGGAGCAAGGGCAGG  50 75
 GF1_RS15015 3363233 .. 3363243 -  -6.8   -3.6217   ATTCACGATATATAA                 CCAG TAC CTGG                 CCGAAAAATCAATCA  63 219
 GF1_RS15010 3362681 .. 3362704 -  -4.5  -3.66378   GACAGTGGACCGAAA          CGACCAGCC GATCGG GACCGGTCA           GGAATCGAAGTCGCC  55 23
 GF1_RS15005 NONE
 GF1_RS15000 3357466 .. 3357479 -  -6.7  -4.66264   CAAAATCCGCAAAAA               GCTTG GTCC CAAGC                CCTTCCTGGTCCTGG  78 411
 GF1_RS14990 3350013 .. 3350039 -  -2.3  -3.25657   GAATCAAAAAAACAG        CG-CAACCGGAGT TCC AC-CCTGTTGTCG        GTCAATTTTTCACCA  43 97
 GF1_RS14985 NONE
 GF1_RS14980 3348457 .. 3348469 -  -6.2  -3.30124   CGGCATCGGCCACAA                GGCC GTCGA GGCC                GGCTACAAGGTCCTC  54 355
 GF1_RS14965 3343630 .. 3343645 -  -6.8  -4.87786   GGAACTTCAGAAAAA              CCAGGA CCGG TCCCGG               TGTCCTTGAAAGAAT  85 313
 GF1_RS14950 3340419 .. 3340435 -  -7.9  -4.56597   CGCTGCCCTGAAAAA              GCCCAGC GCA GATGGGC              ATTGCCGATCTTCCT  82 172
 GF1_RS14935 3336139 .. 3336149 -  -4.6  -3.02511   GCCATGTCGGGAACA                 CCCG GCC CGAG                 TGACGGATTGTGCAC  48 136
 GF1_RS14915 3328864 .. 3328892 - -15.3  -4.74013   GGCAAACACACAAAA        GCAAGCGCGGC AACAGGG GCCGCGCCTGC        TGATATAACACGGAA 100 97
        ltrA 3326768 .. 3326812 -  -8.6  -2.72144   CCATGCCGGGCAAAT CGAGTAGGGTGAGGCAAG TTAATTACG CTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  60 73
        ltrA 3324679 .. 3324723 -  -8.6   -2.6696   AATCATCAGCAGAAT CGAGTAGGGTGAGGCAAG TTAATTACG CTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  59 73
 GF1_RS14900 NONE
 GF1_RS14895 NONE
 GF1_RS14890 3322009 .. 3322025 -  -7.9   -5.0538   CTCCAGGCCAAAAAA              GAGGTGG TGC CCCCCTC              TGCCCGTGGTGCGGA  91 257
 GF1_RS14845 NONE
 GF1_RS14840 3309553 .. 3309565 -  -6.3  -4.03078   CCAGCAGATGACAAA                TGTCA AGC TGACA                GGACCCGGAAAAACG  68 59
        lexA 3308727 .. 3308745 -    -3  -5.77853   AAGGGCCAAAAAAAA             GAGGGTGC CCG GAACCATC             CCCGGAACAGAGGTA 100 142
 GF1_RS14830 3307477 .. 3307490 -  -3.1  -2.75165   GAGCAGAGAAAAATG               TGAGT GCAT ACCCA                GGGCTGGAACTATCA  41 38
        dnaE NONE
 GF1_RS14820 3303999 .. 3304011 -  -7.7  -3.28791   ACCTGCCCTTTATAA                GCATG AAT CATGC                CATGTGCTATTATCT  62 349
 GF1_RS14815 3303123 .. 3303146 -   -16  -6.10295   GGAAGACAAAAAAAA          CGGCAGGGCC CGAA AGCCCTGCCG           CAGCGATGGATGGGA 100 51
 GF1_RS14810 3302649 .. 3302689 - -21.3  -5.24129   CGCGCTGACAAAAAA  GCCGGTCTTTTCCCGGC GAAAAAT GCCTGGAAAAGACCGGC  CCCTGGAGAGAAACC 100 61
 GF1_RS14805 NONE
 GF1_RS14800 NONE
 GF1_RS14795 3300387 .. 3300398 -  -7.2  -3.53012   GGGCGGTCTGGTAAA                CCCG GGGT CGGG                 CACAGAACGGCTCAA  61 48
 GF1_RS14705 3279436 .. 3279478 -  -5.7  -4.61482   TGCGGGAAAAAATAA TCA-GCATCGCCGAGAGACC GCCCCA GGTC-CGCGGCG-TGCATGA CGTGCGGACGAGGCA  75 263
 GF1_RS14695 3278109 .. 3278145 - -15.8  -3.30474   GGTCATAACCAGGAA    CGCAGCAGGCAGCGGG ATCAA CCCGCTACCTGCGCCG    TATGGCATGGTTTCC 100 50
 GF1_RS14690 3277643 .. 3277653 -  -8.2  -3.53012   CTCCTGCGGGGTAAA                 CGCC ATA GGCG                 GGCGACAGGGAAGGA  67 72
 GF1_RS14685 3276004 .. 3276019 - -11.8  -2.91264   CCCCGGATGGAGAGA              GGCGGG AATG CCCGCC               TCTCTTTTTTTGTCC  75 425
 GF1_RS14660 3271299 .. 3271325 - -10.8  -3.55814   TACGAAGCCATAGAA         GAGCAGGTCCGG GAG CTGAACCTGCCC         GAGCCATCCCTGGAA  71 326
 GF1_RS14615 NONE
 GF1_RS14610 3263102 .. 3263116 -    -7  -3.32844   GTGTCGAGCTGATAA               CCCGCC ACT GCCGGG               ATGAACTCGTCCCGG  58 137
 GF1_RS14575 3257156 .. 3257170 -  -3.4  -2.61548   CCTGATTAGAATTTA               CGGGCC GAG AGTCCG               AGCATCAGGAGGGCA  40 1
 GF1_RS14570 NONE
 GF1_RS14565 NONE
 GF1_RS14560 NONE
 GF1_RS14555 3254059 .. 3254088 - -18.7  -5.56372   AAAGCAAAATAAAAA       TCCCCTGCCAGAG AGAT CTCTGACAGGGGA        TTTTTATTTTTAAAA 100 72
 GF1_RS14510 NONE
 GF1_RS14505 3243575 .. 3243592 -  -6.9  -4.59342   TTTAGGAGAAACAAA             CCTACCG CGCC CGGGAGG              CAGCTTACCTGGAGG  81 52
 GF1_RS14500 NONE
 GF1_RS14495 3241544 .. 3241555 -  -4.4  -3.74397   ACGGTGAGAAAAAAC                CCTT TCTT AAGG                 CCAGAAACGCCGTCC  56 274
 GF1_RS14475 3236952 .. 3236979 - -17.8  -6.20267   GTAAAAACAAAAAAA        GGCCGCGTCATC CTGC GATAACGCGGCC         TCTGCCGAACCTGGA 100 67
 GF1_RS14470 3235123 .. 3235136 -  -3.1  -6.19443   CATATCAAAAAAAAA               TCCAT ACAA ACGGA                GCAGTAGATGAACAT 100 524
 GF1_RS14375 3218390 .. 3218405 -    -6  -4.18018   TGTCCGCAGCGAAAA              GCACGG GGGA CCGGGC               GGAAGCTACAGGAAT  70 31
        ilvD 3211680 .. 3211690 -  -2.4  -2.70138   ATGGAGAGGAAACAT                 GGCC TAC GGCA                 CCAGCCGCACCGCGC  39 18
 GF1_RS14345 NONE
 GF1_RS14340 NONE
 GF1_RS14335 3210288 .. 3210319 - -23.2  -3.14931   GTCAGTGGTGAGCAA      TCGCCCCATGCGAA ACGA TTCGCATGGGGCGA       TTTTCATGTCTCCTG 100 29
 GF1_RS14330 3204753 .. 3204780 - -14.2  -5.40072   TGGCGCTTAAAAAAA        GCCTCATGCGAA ACGA TTCGCATGGGGC         TTTTTTCATGTTTTC 100 47
 GF1_RS14315 NONE
 GF1_RS14310 NONE
       cas5c NONE
       cas8c NONE
       cas7c 3196614 .. 3196633 -  -4.2  -2.55668   GAGCCGTACATCAAC            CAGGGAAC TCCC GTCCTCTG             CCTGATACAGGATAA  43 136
 GF1_RS14290 NONE
        cas4 NONE
       cas1c NONE
        cas2 3193618 .. 3193628 -  -2.6  -5.93252   CTCAAAAATAAAAAA                 TATT GCA AATA                 CAGAAAGATAATCAA 100 126
 GF1_RS14265 3188376 .. 3188410 - -14.2  -3.07043   GGTAGCAGGGTAACA     GGCCCCCTGCCCGGCA CCT CACCGGACAGGGGACG     ACAGGTCAGGCTACT  87 36
 GF1_RS14260 3187404 .. 3187419 -  -5.4  -2.78596   CATCCTGTCATCACA              CCA-GGC GTT GCCATGG              GTCACATCCTCTCTA  48 27
 GF1_RS14255 NONE
 GF1_RS14250 NONE
 GF1_RS14245 3184915 .. 3184930 -  -3.3   -3.7282   CTACCGGACGAAGAA              TGATC CGGGAC GATCA               GGTACCCAGGTAAGC  53 23
 GF1_RS14195 3175268 .. 3175286 -    -3  -2.87132   GCTGTCCCGCAGACA             GGCCTG GTCCGGA CTGGCC             GCCCTGAAGAGGGCG  42 55
 GF1_RS14190 3174293 .. 3174326 - -11.8  -3.47526   CGAGCAAGGCAAAGA     TTGAGGCCCTGGTG GAAGAT CACAAGGACCTCAA      AAAAGGAGCGGAAGG  76 371
 GF1_RS14180 3173635 .. 3173657 -  -5.5  -4.58395   GCTACCGGGCAAAAA           GCCCTGCCA ACCCA TGGCAACGC           CTCATTTTTTCGTAA  72 63
 GF1_RS14175 3172557 .. 3172578 - -10.1  -2.64616   CTGCCAGGTACATCA           GGGTACCGC GGGA GCGGTACCT            GGGGTGATGGAACGT  66 188
 GF1_RS14170 3170952 .. 3170967 -  -4.7  -4.63218   GGCTTGTCAAGAAAA              GTTCG ACGTGG CGAAC               CATTTTTTTTATAAA  72 306
 GF1_RS14165 3170103 .. 3170113 -  -6.8  -3.12766   GGACGAAAACAACGA                 GACC CAG GGTC                 AGATCAGAAGCACTG  54 226
 GF1_RS14115 3161319 .. 3161345 - -18.8  -5.61881   GGTGAAAAAGAAAAA         GCCCGCTATCAG TGA CCGATAGCGGGC         TGCAAGGACCCGGAC 100 60
 GF1_RS14105 NONE
        kdsA NONE
 GF1_RS14095 NONE
        lptC NONE
 GF1_RS14085 3154948 .. 3154990 - -27.2  -3.54129   CAGATTCTGCCGAAA TACAACAGGCCCTGCTCCGC GAT GCGGAACAGGGCCTGTTGTT GTTTGAACATGCAAT 100 82
 GF1_RS14075 3151320 .. 3151337 -  -2.7   -3.5771   AAAAAGGGTTTCAAA             GGGAT-CA AGA TGCACCCC             TTCTACCAGGAGTTC  47 493
 GF1_RS14045 NONE
        plsY NONE
 GF1_RS14035 3146206 .. 3146216 -  -5.4   -2.8154   AATTACCACTGAAAT                 TCAG CCA CTGA                 TGGATAAAGGTGTCG  48 176
 GF1_RS14030 3145464 .. 3145481 - -14.1  -6.31682   AAAAGCAAAAAAAAA             GCCGCGC ATGA GCGCGGC              CGGGCTGGAAAACAG 100 51
 GF1_RS14025 NONE
 GF1_RS14020 NONE
 GF1_RS14015 NONE
 GF1_RS14010 3138452 .. 3138480 - -13.8  -3.15861   GAGCAGGTCGATGAA       CCCAGGGC-CCGG GAGG CCGGAGCCCGGGG        CCTGCTCATGAAACC  79 201
 GF1_RS13995 NONE
        recB NONE
        recD 3126075 .. 3126090 -  -4.6  -4.57837   ACACGGGCTGAAAAA              CTGGCG GGAA CGACAG               GGTGGTACATCACGA  70 355
 GF1_RS13980 NONE
 GF1_RS13975 NONE
 GF1_RS13970 NONE
 GF1_RS13965 3120160 .. 3120184 - -20.1  -5.19879   GGGCAAACACAAAAA          GGCAGGAACCG GAC CGGTTCCTGCC          TTTTTGTTTTCCAGA 100 52
 GF1_RS13960 NONE
 GF1_RS13955 NONE
 GF1_RS13950 3115675 .. 3115707 - -12.1   -4.1552   TACCTGTTTAAGAAA     CGG-CAGC-GCCTGG ACCGG CCAGGCCGCTGTCCG     AAGTGCAAAAGCAGC  90 513
 GF1_RS13870 3101300 .. 3101313 -  -2.3  -3.12342   CCATAACAAAAAGAT               CCCGT CCCG ACCGG                TCAGCTGTCCGGATG  42 26
 GF1_RS13865 3100647 .. 3100674 - -13.6  -2.66274   CCCCTTACAAGGAAG        CGAGGT-ATCGCT GCA AGCGATCACCTCG        TGAAGGTCGACCGAT  84 91
 GF1_RS13855 3099994 .. 3100032 -   -11  -5.05228   ACCAAACGACAAAAA   CGACAAAAGCCCGAGGGA GAT CCCCTCGGGCTTTTTTAT   GCAAACATCCTGAAG 100 52
 GF1_RS13845 NONE
 GF1_RS13840 NONE
 GF1_RS13835 3093522 .. 3093539 -  -4.8  -3.86658   GGATAAAATAGACAA             CCGGCT GGCCCG AGCCAG              GCTCCCGGTGGCAGC  59 178
 GF1_RS13775 3083042 .. 3083074 - -19.9  -5.43866   GAATGCTCAAAAAAA      GTGCCACTCCCGCCA GGA CGGTGGGAGTGGCAC      AACGTGGAATGGAGC 100 69
 GF1_RS13770 NONE
 GF1_RS13765 NONE
 GF1_RS13760 3078467 .. 3078497 -  -5.2  -4.64613   GACAAAGAAGGAAAA       CCAGGCCGGTCAGG CTC CATGCAGGGCCTGG       TTGACCACCAGACCG  75 4
 GF1_RS13755 NONE
 GF1_RS13750 3077557 .. 3077585 -  -6.5   -5.7946   CCCTCAACAAAAAAA        TTCAGCGCGGACC GGA GACCCGCGCCGGT        AGGAGTTCCGGGCCT 100 40
 GF1_RS13720 3072231 .. 3072266 -  -6.2   -3.6422   GATCCCTGGAAAACA    CTGCAGG-AATTCACCT TCC ATGAGAACTACCTGCAG    CTGGCAGCCATGGAA  61 514
        amrS 3046349 .. 3046365 -  -2.2  -3.94812   CTTGAGCGAAAAACA              GACCGA CTATC TCGACC              GGGTGGCCAAAATCC  54 313
 GF1_RS13590 3040932 .. 3040955 -  -4.6  -3.02511   TCCACGCCTTCAACA          CCTATGAGAGC GAG GCTCTCA-AGC          TGGTCGACAAAGGGC  47 301
 GF1_RS13580 3039235 .. 3039245 -  -6.8  -3.02947   GAGCCAGCAGAGACA                 GGAC CAT GTCC                 TCCACCGACTGGGAA  56 474
        secB 3035602 .. 3035640 -  -7.3  -3.08032   CCCGCTTCAAAACTA   CTATGAGCAGGTCCGAC TCCCG GCCGGAACCGCACAGAG   GGTTATGCATTCCCC  56 505
        ltrA 3033837 .. 3033862 - -14.8  -6.23545   TGCAAACAAAAAAAA         GCTCCTGCAG ATCGCG CTGCAGGAGC          TTTTTCTTTTGTGAT 100 327
        lepB NONE
 GF1_RS13515 3024228 .. 3024258 -  -8.3  -4.50976   GGTGACAGGACAAAA      CAG-GGAGCCGCGCC CCC GGC-CGGCTCAGCTG      TTTCCCATGACCAGG  85 19
 GF1_RS13510 3022435 .. 3022448 -  -5.2  -4.65895   TCTTCTACGCAAAAA               CGGC GCCCAG GCCG                CTGTTCTCTTCTGCG  75 269
 GF1_RS13500 3020432 .. 3020468 -  -4.4  -2.59748   GATGGCGACAACCGA   TGCCACATCTCCGGCCC GCAT GGGCCGGACAC-TCACA    CCATGCTCTGGGCTA  45 21
        rimI 3019933 .. 3019944 -  -5.8  -3.12668   GATGGCCACAGTCAA                GTCC CCAG GGAC                 GGGTTTATGGCGTCC  53 105
 GF1_RS13490 NONE
        tpiA NONE
        secG NONE
 GF1_RS13475 3017303 .. 3017332 - -20.1  -6.02345   TAATCAGAAAAAAAA       GGGCCGGTATCCC TGAC GAGATACCGGCCC        TTGAAAATCTGGTGC 100 35
 GF1_RS13470 3015852 .. 3015862 -  -6.8   -2.7185   ATCACTGGTCAATGA                 GGTC CTT GACC                 GTCTTCGCGACCTGG  53 90
 GF1_RS13460 3013889 .. 3013905 -  -2.9  -3.28924   GATCCGGGCGGACAA              CCGCTAC CGG GCAGCAA              CAGGGCCGGCCGGCG  47 43
 GF1_RS13455 NONE
 GF1_RS13450 3012801 .. 3012826 -  -9.8  -5.76237   CAGATAAATAAAAAA         GGAGTTACAG TGAGCT CTGCAACTCC          TTTTATGCGTTAAGA 100 41
        fusA 3010490 .. 3010511 - -12.3  -2.51815   GCGAACCATGAACAC           CCTCCCCTG ATAA CAGGAGAGG            ATCACGCATAACTTT  76 39
 GF1_RS13440 3009648 .. 3009687 - -11.4  -2.84566   AATATCTGATAATCA  TGGTGTCACCGGGT-GGCC GGA GGCCGACCCGGTGACGGGA  AATCGGCTACGGGAT  75 42
        hisA NONE
 GF1_RS13430 3008388 .. 3008405 -  -8.4  -3.01791   AGCCTGCTTCGAACA             GGGCAG ACCATG CTGCCC              GCTTTTATTCGAAAA  62 273
 GF1_RS13425 NONE
 GF1_RS13420 3006411 .. 3006422 -  -2.2  -4.15044   CTGCCTGGCAACAAA                CAGA CCGG TCCG                 CTCGAGGTACCGGGG  58 138
        yedF NONE
 GF1_RS13410 3003465 .. 3003478 -  -3.9  -5.14645   ATAATTCAAGAAAAA               TGAAT GATG ATTCA                CAGGGGCAAGCTCTA  79 74
 GF1_RS13405 3002827 .. 3002865 -  -5.2  -3.55071   GGATATGCGGTTAAA  GCCGTGACGCAGTTCCGC TCGTT GCGGGACCTCG-C-CGGC  TGGTGCACTGATGAA  56 54
        dsrM 3001665 .. 3001675 -  -6.8  -2.78596   GAGCCTGTCATGAGA                 GAGG GCC CCTC                 TACCACGCTCCTTGC  53 104
 GF1_RS13395 NONE
        dsrJ NONE
 GF1_RS13385 NONE
        nrfD 2997562 .. 2997590 - -18.9   -5.9873   TGAGGACAAAAAAAA        GCCCCTGATCCAG TAA CGGGATCAGGGGC        CTGAGGTCTGTATGA 100 52
 GF1_RS13375 2996706 .. 2996716 -  -6.8  -2.70932   CCTCTTTTTCAACCA                 GGAG ATT CTCC                 TGCTCTGGAAGCGCT  51 70
 GF1_RS13365 NONE
 GF1_RS13360 NONE
        aroD NONE
 GF1_RS13350 NONE
        aroA 2991190 .. 2991209 -  -2.8  -3.68529   AGCTCAGCAGGGAAA            GGA-AGGTC ATT GTCCTGTCC            TCGATACCTGGTGCT  51 79
 GF1_RS13340 2990232 .. 2990252 -  -4.8  -3.96398   CAACAGGAAAAAAAT           GGCAGAAAG TGAA CTTTCT-CC            TTCATAACAGGAGGC  60 355
 GF1_RS13300 2979289 .. 2979306 -  -3.3  -3.21934   TTTCCCTGATAAAAT             CTCTCGGG TCT CCCG-GCG             GCTGCCATGAAAAAC  45 204
 GF1_RS13295 NONE
 GF1_RS13290 2976875 .. 2976905 - -17.7  -4.53636   AGTATACAACGAAAA       CAGCCCCTTGACC TGAAC GATCAAGGGGCTG       ATATTTCTGGCGCGC 100 33
 GF1_RS13285 2975513 .. 2975526 -  -4.5   -2.7371   ACAGCATGAGACAAC               CAGTG CTAC CACCG                CAGCCAGTAATGACC  46 76
 GF1_RS13280 NONE
 GF1_RS13275 NONE
 GF1_RS13270 NONE
 GF1_RS13265 NONE
 GF1_RS13260 NONE
 GF1_RS13255 2969335 .. 2969351 -  -2.2  -4.07568   TGTGGGGCTCTAAAA              CCCTAC ATCAG GCAGAG              GATTTTCCTGATTTT  56 87
 GF1_RS13250 2967163 .. 2967189 -  -8.7  -3.53343   AAGGGTGTCCCGAAA         CGGAGCGGC CCTGTTGCT GCCACTCCG         CTCAAGGATCCACCT  67 90
 GF1_RS13245 2965949 .. 2965979 - -14.7  -5.64873   GGTAACAACAAAAAA       GGCCCGGGGAC AAATGAAAA GCCCCCGGGCC       GGTTCGACGCAAGCC 100 58
 GF1_RS13185 2954991 .. 2955004 -  -3.8  -4.02468   AAAAACACCCATAAA               CCCT TTGCCG AGGG                TCAGTGTATCTCCTG  60 386
 GF1_RS13140 2942681 .. 2942705 - -12.7  -3.29511   GCCAGCCGGGCAGAA          GGCCGGGGAAC AGA GAACCCCGGCC          CGAGGCTGTTGTTAA  83 37
 GF1_RS13135 NONE
 GF1_RS13130 NONE
 GF1_RS13125 NONE
 GF1_RS13120 2939093 .. 2939118 -  -5.3  -3.07344   GTACCGTGGAAGACA         GGGCCCGGCGGC GAC GCCAC-GGACAC         AGAGAACCAGAAAAA  50 58
 GF1_RS13080 NONE
 GF1_RS13075 2926023 .. 2926034 -  -5.8  -3.18582   CACTCCACCGACGAA                CAGG TGGA CCTG                 GAGGACATGGTCGAG  51 63
 GF1_RS13035 2918340 .. 2918354 -   -10  -3.00239   AGTCAAACACCAAAT               GAGGGA TTT TCCCTC               TCGAAAAAAAGGGGG  69 41
 GF1_RS13025 NONE
 GF1_RS13020 2914429 .. 2914451 -    -4  -4.23758   ATGGTACATGGAAAA           CAGGTCGATC CCG GCTGGACCCG           GCGCAGGATGGGGGC  62 243
 GF1_RS13015 2912675 .. 2912689 -  -4.2  -3.83561   GGCCCGCAAAAAAAT               TGCGGT GTG ACAGCA               TGCACACTGGCCAAT  56 103
 GF1_RS13010 NONE
 GF1_RS13005 2910658 .. 2910668 -  -6.8   -2.5955   ACCCGGCACAACCGA                 CTGG CAG CCAG                 GCATTTGCGGGAATC  52 77
 GF1_RS13000 NONE
 GF1_RS12995 2906633 .. 2906660 -  -5.4  -4.37092   ATCCGCCGGAGAAAA        CCCGGCCCGG TGACCATT CCCGGCCGGC         AGCCCTGGCCAGATA  70 168
 GF1_RS12985 2903946 .. 2903975 -  -9.4  -5.95539   CCGGAAATAAAAAAA       TCCCGGACCAAT TGTTAC ATTGATCCAGGA        TGTCCCGTCTTTATC 100 378
 GF1_RS12980 NONE
 GF1_RS12975 NONE
 GF1_RS12970 NONE
 GF1_RS12965 NONE
 GF1_RS12960 NONE
 GF1_RS12955 NONE
 GF1_RS12950 NONE
 GF1_RS12945 NONE
        cbiE NONE
        cobI NONE
        cobM NONE
 GF1_RS12925 2892769 .. 2892781 -  -9.1  -4.16016   GTATTTTTCAATAAA                CCAGC ATG GCTGG                ACCACATTTCAGAAC  82 363
 GF1_RS12920 2891519 .. 2891534 -  -4.6  -3.54129   GAGACCTTCGCGAAA              GTCCTC GTTT GTGGAC               GGACCCTAGTCCAGC  53 31
 GF1_RS12915 2890644 .. 2890679 - -17.7     -6.13   AGAGTGAAAAAAAAA    GCCCGCAGAAACCTT ATGCAA ACGGTTTCTGCGGGC     TTTTCCTTTCTTTTC 100 41
 GF1_RS12905 2886721 .. 2886737 -  -7.3  -3.48668   ATCATTACACCACAA              GTACCAT AAA ACGGTAC              TTCGGCACAAAAATT  61 62
        dnaG NONE
 GF1_RS12870 NONE
 GF1_RS12865 2878192 .. 2878219 -  -3.2  -3.51924   GCTTCACGGAGACAA        CCGGCCAGCACTG TAC CCGGGCGGGC-GG        CAACAACGCAGGGAG  49 86
        dprA 2876910 .. 2876922 -  -6.9  -3.53091   AGCGGCCGGTCCAAA                CGACC CCG GGCCG                GTGTGTCGCCGTATC  61 116
         rpe NONE
 GF1_RS12850 2874333 .. 2874345 -  -2.6  -3.63367   TTTGTCAACAAAAAT                CCGC TGGAC GCAG                GCACAGCTCCTCTTT  49 170
        dsrA NONE
        dsrB 2871649 .. 2871677 - -14.6  -5.37865   CCAAGAATGAAAAAA        TCAGGCTGGCAC GAAAG GTGCCAGCCTGG        ACAACCGAAAATTAC 100 37
 GF1_RS12835 2871314 .. 2871334 -    -9  -6.40073   AATGTAAAAAAAAAA            GCAGAGAC TCGAG GCCTCTGC            TTCAATGGAACGGGT 100 58
 GF1_RS12830 2870501 .. 2870512 -  -2.2  -3.59583   ACAACCAGTTGGAAA                CCTG CGCT CAAG                 ACAGGCAGAAGTTAT  49 40
 GF1_RS12825 2869297 .. 2869314 -  -3.5  -4.07746   TGGGTAAAAAGATAA             CTAACTA ATTA TAATTAG              TATTCTTTTTAAAGT  60 189
 GF1_RS12820 2868251 .. 2868273 -  -4.8  -2.61695   CGCAGTCGTAAACAG           CCTGCATCAC ACG GTCATTCAGG           TTAGATCAAAAAGCG  45 26
 GF1_RS12815 NONE
 GF1_RS12810 2867266 .. 2867287 -  -2.2  -4.64861   CTCCGGGAAAAGAAA           CAGGCCAGC GACGA GCTGGAC-G           ATTCCGTTGCCAGGG  66 480
 GF1_RS12800 2864115 .. 2864125 -  -6.8  -3.66018   CGATCATTTCAAGAA                 GGTC AAT GACC                 ACTTCGGTCATCCGG  63 422
 GF1_RS12765 NONE
 GF1_RS12760 NONE
 GF1_RS12755 2854490 .. 2854522 -  -9.8  -4.23054   AGACAGGAGTGAAAA     TC-GCCGGCCTGGGG CAGG CTACAGGCCGGCAGA      ATCTCAGGCCCGCAC  85 29
        hemL 2850167 .. 2850181 -  -6.4  -3.72231   CGAGACACTGAAGAA               CACCCT TGC AGGATG               GCAGCCCCTGCGCGG  63 137
 GF1_RS12730 NONE
 GF1_RS12725 NONE
        atpB 2848713 .. 2848729 -  -2.1  -2.66274   TTCTCGATAATTAAT              GGGCGTG TTC CATGGCC              TGGGCACAGTAAAGA  38 4
        atpE 2848301 .. 2848326 - -19.1  -5.79526   ATATTGCAAAAAAAA         TGGGGCTGCAG CAAG CTGCAGCCCCA          CCGGGTCTTCTCTTG 100 52
 GF1_RS12710 NONE
        rimO 2845563 .. 2845585 -  -8.3  -2.84325   CCCTGGTAAAGATGA           CGGCCCGGC AGGCG GCCAGGACG           AACCACTCATTGCAC  61 369
 GF1_RS12655 NONE
        aroC NONE
 GF1_RS12645 NONE
 GF1_RS12640 2834156 .. 2834181 - -11.1  -2.71712   CCCTGCTCCTGAAAT         TTCCTCCGGCC GTCG GACCGGAGGGA          GACCTGCCTCCTCAA  70 116
         gap 2832987 .. 2833013 - -11.6  -3.84266   ATATTGCAGACCAAA         GGGGAATGATTC CTG GGACCATTCCCC         TTGCACTCCTGGCAT  88 62
 GF1_RS12630 2832106 .. 2832135 - -25.1  -5.26875   TCCTGAACTAAAAAA       GCTCCCTGGCGGC CATG GCCGCCAGGGAGC        CTTTTCAGCCCATGA 100 83
 GF1_RS12625 2829843 .. 2829882 - -12.3  -5.88197   GGAAACAGAAAAAAA CTCCCTG-T-CTGGCCGGA GGAA TCCGGACAGAAACAGGGAG  AATACAGGATGGCAA 100 63
 GF1_RS12620 2827710 .. 2827728 -   -11  -3.33696   CTGCCTCTGAACGAA             CTTGCCCG GAT CGGGCAAA             GAAACATCACAAGGA  76 309
 GF1_RS12615 NONE
 GF1_RS12610 2824415 .. 2824433 -  -2.4  -4.03167   CAACAGGAATAAGAA             GTCAAGAA CTA TTCCTGAA             ACCAGGGACGAACGG  56 102
 GF1_RS12605 2823699 .. 2823709 -  -3.2  -3.01915   GTTTCATAAAAACAT                 CTCC CAG GAAG                 TGCGTTGCGGAACCC  43 90
 GF1_RS12600 2823122 .. 2823177 -  -5.4  -2.87931   CTGAGCGTGCATATA GAGGCAGGAAGATAGACAGACGACAGA CCT TCTGA-GTGTATCACACTTCCTGCCCC CGGGGCAATCGCATC  49 74
 GF1_RS12595 2818748 .. 2818779 -  -3.8  -3.14132   CCGCTGCGTCATCAA      CCCCTTGA-TAGAGC GTC ACTCTAATCAATAGG      CCTCTTCCTTGCGTA  47 86
 GF1_RS12590 2815557 .. 2815595 -   -13  -2.85351   GGTTTCCAGAGGATA   GGCCCCGGTGACCGCCCG GCA CCACCGGTCACCGGATCC   CGACCGGAAAGCGGA  82 50
         acs 2803441 .. 2803474 - -13.1  -4.08064   AACCTCTCCTGAAAA     CAGAACAGGCAGGGG ACAG CCCCTGCCTGTGTCG      TTAAGCCCTGTGCAG 100 86
 GF1_RS12540 NONE
 GF1_RS12535 2800442 .. 2800465 -  -7.4  -3.53012   TCCCCTGTCTTGAAA          CCGAACCACT GAGC AGTGGCCCGA           CTATCGACTGCGGAC  64 271
 GF1_RS12530 NONE
 GF1_RS12525 2798259 .. 2798286 - -24.2  -4.03586   GGGCAAACACAACAA        GCGCCCCGGCTC CGAA GAGCCGGGGCGC         TATGATCCACCGGTT 100 76
        ltrA 2796163 .. 2796207 -  -8.6  -2.74263   ATGGCAGGCCCAAAT CGAGTAGGGTGAGGCAAG TTAATTACG CTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  60 73
 GF1_RS12515 2795412 .. 2795424 -  -3.3  -3.38046   CCCTTACTTCAAATA                GGGCA GCA TGGCC                TTGAACTCCGGAGTC  47 1
        alaS NONE
 GF1_RS12500 NONE
 GF1_RS12495 2790272 .. 2790283 -  -5.8  -2.87132   TTTCGGGCTGACACA                GGGT CTGG ACCC                 CGGTCAGGGATCAAA  52 29
 GF1_RS12490 NONE
 GF1_RS12485 NONE
 GF1_RS12480 2786871 .. 2786885 -  -6.4  -2.63432   ATACAGGCAAGCAAG               CAGAGT GAG ACTCCG               AGGCGTAGCGGTGTC  50 135
        fabG NONE
 GF1_RS12470 NONE
        fabZ NONE
 GF1_RS12460 NONE
 GF1_RS12455 NONE
 GF1_RS12450 NONE
 GF1_RS12445 NONE
 GF1_RS12440 NONE
 GF1_RS12435 2779633 .. 2779657 -  -5.6  -2.53911   CGAACCGGCAATCCA          GGCCAGCCTG AAGGG CACCCTGGCC          GTCACCGGCCTGATG  47 63
 GF1_RS12430 2779410 .. 2779420 -  -2.4  -2.66316   GCCTTCAGCAGACCA                 CGGC AGC GCTG                 CTTTTGCCTGTGGTT  38 4
 GF1_RS12425 NONE
 GF1_RS12420 NONE
        atpH NONE
        atpA NONE
        atpG 2775056 .. 2775070 -  -2.8  -2.72379   CCAACTCGTGAATCA               CCCATT TGA AATGGC               CTCCTCTAATAATCA  41 62
        atpD NONE
 GF1_RS12395 2773148 .. 2773166 - -11.7  -6.06723   TCGGGCAAAAAAAAA             GCCGTCC GGAAT GGACGGC             TTTTCTTAGAGAGAC 100 51
 GF1_RS12390 2771540 .. 2771572 - -14.2  -5.84381   CCATCAACAAAAAAA     GGCGCTCGAA-TCCG GAAG CGGAATTCGGGCGCC      TTTTTACTTTTTCAG 100 75
         efp NONE
        epmA 2763879 .. 2763913 -  -2.1  -4.65916   TGGAGCCCAACAAAA    TCGG-CATCG-ATACCG GCG CGGTCTACGGCGGCCGA    CTCACGGCCCTGCTA  66 145
 GF1_RS12350 2761629 .. 2761643 -  -2.8  -2.88427   AATATTGTCGATACA               TGGAAA CAG TTGCCA               GCTCAGGTTCGGCGC  42 59
 GF1_RS12345 NONE
 GF1_RS12340 2759690 .. 2759707 - -10.5   -6.0427   AGCACATAAAAAAAA             GCGGGCC CGAC AGCCCGC              TTTTTTTTATGCATC 100 61
 GF1_RS12330 2757071 .. 2757087 -  -2.9  -4.17657   TATGACAGCGGAAAA              GCTCAAA AAC TCGGAGC              CGGTTCTTAAAAAGC  60 101
 GF1_RS12320 2754430 .. 2754440 -  -5.4  -2.78679   GGTTTTCAGGTAAAC                 GTCA GGC TGAC                 CGGACAGTGATCCGA  48 5
 GF1_RS12315 2753690 .. 2753705 -  -5.4  -3.46586   TGTGAAACAGAAAAT              CAGTCG GGGA CGACTA               TGGAGTTACGGACCA  56 9
 GF1_RS12310 2753136 .. 2753186 - -26.5  -4.03234   TTGTGCGGATACAAA CAAAAAAAGCGGCCCGGATATCC TGAGC AGATATCCGGGCCGCTTCTTCTG GAGAAAACAGGTATC 100 65
        rpmH NONE
        rnpA NONE
        yidD 2745336 .. 2745361 -  -6.2  -5.30189   TACAACACGAAAAAA        CCGGTC--GCCA TACA TGGCCAGACCGG         TAGTGTTCCACATAC  93 120
        yidC NONE
 GF1_RS12260 NONE
        mnmE 2740991 .. 2741006 -  -6.8  -3.28712   TTCCGCGCCGGAGAA              GCCACC CTCC AGTGGC               AAGAACACCGGCAGT  59 284
 GF1_RS12225 NONE
 GF1_RS12220 2735363 .. 2735385 -  -3.3  -3.65199   AACCTGTCACCGAAA          CCGGGCGCCG TTCA CGG-GCCGAG           CGGATCCTGGGCGCA  51 50
 GF1_RS12215 2734104 .. 2734128 -  -6.3  -3.06796   CCTGATTTCACCGAA          CCGCCGCTTTC CCT GGAAGGGGCAG          CCGCTCACTGGAATC  52 346
 GF1_RS12160 NONE
        ligA 2722110 .. 2722120 -  -3.2  -3.22298   TTCAGCCATCATGAA                 CCTC CCT GAAG                 CAGATCGAGAAACTC  45 82
 GF1_RS12150 NONE
 GF1_RS12145 2721561 .. 2721577 -  -5.9  -3.73042   CGGTCCACTAAAAGA              TCATCTC CAG GAAATGA              CTGTGAAAGCGACTG  63 1
 GF1_RS12140 2720391 .. 2720403 -  -4.1  -4.74504   AGTTCAATGGAAAAA                CCTAC GAG GTAGA                CGAGGACGGCTTCCT  75 408
 GF1_RS12130 2718472 .. 2718502 -  -8.9  -2.70932   CCTGGCCTCCAACCA       GACCCGCAGGG AAGAGATGG CCCGGCGGGCC       GACTGAAAAAGCGGA  60 177
 GF1_RS12120 2715121 .. 2715142 -  -8.7  -4.07568   CCGCCCTTGCCAAAA           GGCTGGACA AACA TCTCCAGCC            TGAATCCGGAGCCAT  77 131
 GF1_RS12115 2712813 .. 2712833 - -13.3  -2.57463   AAGTTCCTCCACAAT            GCCCAGGTC CTG GACCTGGAC            CGGCTGGACCGGCTC  74 242
 GF1_RS12095 2709549 .. 2709569 - -14.7   -5.4659   CAACAGAAAGAAAAA            GACCGGGCA GAA CGCCCGGTC            TACGGAAGAGGAGAG 100 108
 GF1_RS12090 NONE
 GF1_RS12085 2708514 .. 2708548 -   -18  -5.74122   CAGGAGACAAAAAAA     GAGAGCCGATCGATGA TTC CCATCAACCGGCTCTC     ATAAAAAAATCGTTG 100 53
 GF1_RS12080 2707603 .. 2707631 -  -3.8  -5.94743   TAAAAAAAATAAAAA        TAAAGGTTGCCG GTCGA CGGCAAACTCTG        CTCCGGCAGCGCCGG 100 69
 GF1_RS12075 NONE
 GF1_RS12070 NONE
 GF1_RS12065 2706129 .. 2706141 -  -3.3  -3.37915   GCCGAGAAATTAAGA                GTCAG GAG CAGAC                AGCTGCTTGAGCCGG  47 7
        ccsB NONE
        hemA 2704008 .. 2704023 -  -5.4  -2.62184   GTTCCCCGGACATCA              CGATCC TTCT GAATCG               TTACCGTTGTCAAGC  47 7
 GF1_RS12050 NONE
 GF1_RS12045 2702022 .. 2702033 -  -2.2  -5.26316   TCAGGCGAGAAAAAA                GAAG CACT CTCC                 AGATTTCTGATCGAA  80 514
 GF1_RS12000 NONE
 GF1_RS11995 2693069 .. 2693083 -  -3.4  -4.26344   AGATCGGGATCAAAA               CCCGCA TGC CGCCGG               AGTTGATGTTTCTTG  64 385
        ltrA 2689681 .. 2689696 -  -7.6  -3.29739   GCTAACCGATACTAA              TAAGCC GTGC GGCTTA               ACCATATCCTTTTTA  62 310
 GF1_RS11945 2681389 .. 2681400 -  -5.8  -2.94099   CGCCGCCAGGACAGA                CTGC GCCA GCAG                 CGACGCACGACCTGA  52 74
        ltrA 2675344 .. 2675366 - -10.6  -3.77193   ATAAAATAGAGACAA           CTACATCCTG AAC CAGGATGTTG           GGATTTTTTTCAATA  84 510
 GF1_RS11920 NONE
 GF1_RS11915 2673028 .. 2673047 -  -7.8   -4.1899   TGACCGGAGCCAAAA            GCCATCCG CCCG CGGATGCC             GAGTATGCCAACTCC  74 313
 GF1_RS11885 2665195 .. 2665245 -  -6.1  -5.96219   CAGCCACAAAAAAAA TGGCGCCTGCACTCGACCGACT AGGAGGAA AGTCGGCTGC-TACAGGCGCCC GCCAGGAAGGAGGAG 100 292
 GF1_RS11865 2660246 .. 2660281 -  -2.4  -3.45784   GGGAGAACAAATATA    CCCATCCGATCAC-CCG GCC CGGCGCGAGCTGGTAGG    AGCCGACCAGCCGGC  47 74
 GF1_RS11835 2653115 .. 2653134 -  -3.5  -4.26622   AAATGATAGTGAAAA            GAAGCGG GCAAGG CGGCTTC             AGGCTTTGAAAAGGC  62 47
        mreC 2652215 .. 2652239 -  -3.6  -3.35046   CGATCCCTGTAAAGA         CGACGACGC TCATGGCT GC-TCGTCG          ACAAATGGAGTGTCC  49 10
 GF1_RS11825 2651697 .. 2651718 -  -6.5  -2.64051   TCATGACAGAATTCA           GCGGTACCGG TTA CCGG-ACCGG           ACCCGGAGCTTCTGA  50 1
        mrdA 2649646 .. 2649658 -  -3.3  -4.06419   GTGGTTCAGAAACAA                GCTGA TAA TCGGC                TGAACATTTTCTTAA  58 70
        rodA 2648285 .. 2648301 -  -3.5  -3.71321   AGTAAAGGGGAAGAA              CACTCCG GAG CGGCGAG              CACGGAATCGGGAAG  56 113
 GF1_RS11805 2646194 .. 2646213 -   -15  -5.88565   CCTACAACAAAAAAA            CCCCTGCC TTGC GGCAGGGG             TCCATCTTCAATCCG 100 54
 GF1_RS11795 2642370 .. 2642384 -  -2.1  -3.91911   CCCAGTGGAAGGAAA              TGCGGG AGGA CCCG-A               GCACCAAGATCGGCC  53 133
        thiE NONE
 GF1_RS11780 2639197 .. 2639216 -    -5  -3.69323   TGATTACCACTGAAA            TTCAGCCA CCGA TGGATGAA             GGTGTCGGCCTCACT  55 301
 GF1_RS11745 2632986 .. 2633006 -  -3.1  -4.74103   GGGGCAAGGCAAAAA            CTGGTCCGG CCG CTGAACCCG            GGCATAGAAACTATC  71 36
 GF1_RS11740 NONE
 GF1_RS11735 NONE
 GF1_RS11730 2630324 .. 2630346 -  -4.8  -2.82516   CCCGGGACCAGGACA          CCCGCGCGG ACGACG CCG-GCGGA           TGCCTGCTTTTTGTC  46 39
 GF1_RS11725 NONE
 GF1_RS11720 2628138 .. 2628160 -  -8.4  -3.13403   CTCGGTGCACGAACA           GTGATGCGGC GAG ACCGCATGAC           GACTGCAGGATTCAG  63 149
        ribE NONE
        nusB 2626581 .. 2626600 -    -5  -4.07535   AATGTCGACAAAGAA            CTGACAACC CGT GGTTGCC-G            TGCGCTGGTTATTCC  62 34
 GF1_RS11695 2623313 .. 2623329 -  -8.7  -3.72893   GATGCGTCGATGAAA              CCAGGCA TTT TACCTGG              AAGGGAATTGATTCT  72 59
        aprB 2622390 .. 2622400 -  -2.6  -3.06815   ATCTCCTCTAATAGA                 TATT CAG AATA                 GAATTTTTACAGGTA  42 58
        aprA 2620296 .. 2620321 - -19.1   -4.8048   CGCGTATATGAAAAA         TCTCCAGGCCC AATC GGGCCTGGAGA          TTCTCTCTAACAGAT 100 57
 GF1_RS11680 NONE
 GF1_RS11675 2616597 .. 2616636 - -13.7    -3.786   CCAGAAAATTCCAAA  CGTTGCCATCCGGTACCA TGAAT TGGC-CCGGATGGCAACC  GGTTCTACACGACAG 100 46
        qmoC 2615259 .. 2615294 - -19.8  -3.53091   ATCCTGCTCTGGAAA    CAGAAAAGCCGGAGGC AGAG GCCCCCGGCTTTTCAG     CAATCCTGTGCAGCC 100 47
 GF1_RS11665 NONE
 GF1_RS11660 2614868 .. 2614878 -  -2.4  -2.94354   CGATATATTCAGACA                 GACC CGA GGGC                 TGTCAACACCATCAT  41 40
 GF1_RS11655 NONE
 GF1_RS11650 2614613 .. 2614627 -  -5.6  -4.73614   TAGCAGCAAAACAAA               CCGGCT GAA AGCTGG               AGCCCACGACCGGAC  78 23
         tuf 2613288 .. 2613315 - -18.6  -3.58726   GGCCCCGATATATAA        TACTCAGCAGGC CGGA GCCTGCTGAGTA         TTCTTTAAAAACCGC 100 77
        rpmG NONE
 GF1_RS11635 2612826 .. 2612836 -    -4  -2.79796   TTTCATTTCAGCAGA                 TTCA GCC TGAA                 CCACCTGTCGGCTTT  43 120
        secE NONE
        nusG NONE
        rplK 2611583 .. 2611609 -  -2.9  -3.34344   GCAGGTGTTAACGAA         GTGACCGACGG CCTGT CAGTCGATTAC         AGTAATTCCGCAGGA  47 14
        rplA 2610782 .. 2610794 -  -4.1  -2.94595   AATCCTCAGCAGATA                CAATG GGA CATCG                TGATCCGAACTGGAT  45 45
        rplJ NONE
        rplL 2609534 .. 2609567 - -13.9  -2.70354   CTGCCCACAAACGCA     GGAACGCTACAAGGG TTTA CCCCCGTAGCGTTAC      CTTGTTTATGTCGTA  85 85
        rpoB 2605220 .. 2605231 -  -2.2  -2.77523   CTTCCACTAATATCA                CCCT TAAA AGAG                 TTGCAAGCTGAATAC  39 138
        rpoC 2601059 .. 2601090 - -11.5  -2.62316   CAAATTTATAACGCA      GCGTGCCCGCCCC CTTCAT GGAGCAGGCACGA       GAACAAGGGATAATA  73 76
        rpsL NONE
        rpsG NONE
        fusA 2597821 .. 2597833 - -10.5  -2.78816   CCAGCGGTCAGTACA                GCCGG CCG CCGGC                CAATGGGTACGGGCC  70 41
         tuf NONE
        rpsJ NONE
        rplC NONE
        rplD NONE
 GF1_RS11555 2594581 .. 2594603 -  -2.6  -3.25823   CCTGTGTCAGATCAA           TCGCCAAGCC TAC AGCTCGTCAA           GGAAATTGATCTCAC  43 12
        rplB 2593629 .. 2593649 -  -2.5  -2.64155   GTTCTTTGAAAGTCA            TGCCTCAGT TAC ACTGAAACC            GGCTTTGCATCATTT  38 71
        rpsS NONE
        rplV NONE
        rpsC 2592127 .. 2592137 -  -2.4  -3.71378   GACTGTATATTGAAA                 GGCC CGT GGGC                 ACATTCAACGTGTTT  51 45
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN 2590770 .. 2590783 -  -3.1  -2.69947   CAATGGCTACAGAAC               CTC-CG GTG CGAGAG               ATATAATCTTCATGA  41 3
        rplX NONE
        rplE 2589774 .. 2589794 -  -6.2  -3.37259   AATCAGTTCGAAATA           CTTGACCAC TGAT GTGG-CAAG            AAATTATTTCTTTTT  56 29
 GF1_RS11500 2589516 .. 2589542 -  -5.2  -2.63102   ACCATCTCCAGAGTA        GTTCAGC-CGG AGTATA CCGTACTGAAC         TAATGTACAGCACTT  47 42
        rpsH 2589011 .. 2589023 -  -3.4  -2.78935   ATACCGGTTACCAGA                CTTC ACACA GAAG                CTCGCCACCGATGTT  41 5
        rplF NONE
        rplR 2588060 .. 2588071 -  -7.2  -3.70068   CATTAGAATTCCAAA                CCGC CCTC GCGG                 GCACCTTCAGACAAA  63 1
        rpsE 2587434 .. 2587468 -    -2  -3.05762   AACGAATAATGAAAG    GT-TCGCTCCAGCCC GCAGTT GGGCAGCAGCGCTAC     TCTAAGTAAAATCAG  42 37
        rpmD NONE
        rplO NONE
        secY NONE
         map NONE
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK 2583230 .. 2583277 -  -6.8  -3.29704   CCTCCATGAAATATA CTTACGGCCTGCCACCCCGGGC GCTC ACCCGGGAAGACAAACCGTTTA CCTCCACGCCTTAGC  59 49
        rpsD NONE
 GF1_RS11430 NONE
        rplQ 2581005 .. 2581027 - -10.7  -6.32216   ATACACAAAAAAAAA           GCTGATATG ACGAG CATATCAGC           TTTAACGAATCTCTT 100 62
 GF1_RS11420 2579738 .. 2579749 -  -5.8  -2.64981   ATATCCTGAAACGCA                GCAG GTCC CTGC                 TCATGATTTATAACG  50 486
        rpsB 2578703 .. 2578725 - -13.5  -3.10164   TCATCCATCATGGAA           GAAGGGGAC AACAG GTCCCCTTC           ATGCCAATGAATAAA  83 51
         tsf 2578026 .. 2578036 -  -3.2  -6.02914   GGCAGAGAAAAAAAA                 TCAG GCG CCGA                 TCTGGAACCGGGCAA 100 15
        pyrH 2577190 .. 2577200 -  -6.8  -5.71983   CCAACCAGAAAAAAA                 TCCC TGC GGGA                 CCGACAGTCTTGGCT 100 58
         frr NONE
 GF1_RS11395 NONE
 GF1_RS11390 NONE
 GF1_RS11385 NONE
        rseP 2572662 .. 2572681 -  -2.8  -2.80612   TTCAATGGCAAGAAT            CAGGGGCTG GTC CA-CCGCTG            GATAATCCTGAGTAT  41 5
        tsaB NONE
        ispG 2570751 .. 2570761 -  -2.4  -4.01369   AATAACGGAAAAAGA                 CCGG CGG CGGG                 ATGGATGATCAGTCC  56 34
 GF1_RS11365 2568972 .. 2568991 -  -7.8  -3.01791   ACGGCCCGGGCAACA            GCCCGCCGG TTA CCGG-AGGC            GGCTCAGTTCGTCCT  59 15
 GF1_RS11355 2566662 .. 2566674 -  -3.3  -2.82742   ATCCTGCCAGAAGTA                GTCAG TTA CTGGC                CCTCAAAAAGAATTG  41 77
 GF1_RS11350 2566080 .. 2566105 -  -6.1   -6.4275   CAAAAATAAAAAAAA         TGACCCCTGTTG TTC CATC-GGGGCCA         TCACCTGTGAGCCAA 100 106
 GF1_RS11345 NONE
 GF1_RS11340 2565085 .. 2565106 - -13.7  -6.43839   ACACCAAAAAAAAAA           GGCGCTCCC CGAA GGGAACGCC            TTTTCTCATCCACTT 100 75
 GF1_RS11310 2559727 .. 2559757 - -12.7  -6.07627   ACCTGCAAAAAAAAA      CCACTGCA-ACCGC ACAT GCGGTCTGCAATGG       CTACTTGGTGTCTAT 100 240
 GF1_RS11305 2558448 .. 2558462 -  -2.8  -4.15044   TCTGTGCTGAAGAAA               CAGG ATTGGTA CCTG               TTATTCTATTGTATA  60 240
 GF1_RS11300 NONE
 GF1_RS11295 NONE
 GF1_RS11290 2555604 .. 2555616 -  -3.3  -2.66316   CCTGTTATTAGATGA                TCTCC CGG GGCGA                CACCATCGGTGGTCG  40 131
 GF1_RS11285 NONE
 GF1_RS11280 2554451 .. 2554477 -  -5.1  -4.59109   GATACGCGTGAAAAA         GACAGGATCGA GGAAA TCGATCTCGCC         TTAACAAAAATGGAA  72 182
 GF1_RS11265 NONE
 GF1_RS11260 2551161 .. 2551174 -  -2.3  -3.18506   ATAAGTCAGCAAAAG               GCCGT GAAA ATGGC                AACGTTATCATTAAA  44 388
 GF1_RS11250 NONE
        dctP NONE
 GF1_RS11240 NONE
 GF1_RS11235 NONE
 GF1_RS11230 NONE
 GF1_RS11225 NONE
 GF1_RS11220 NONE
 GF1_RS11215 2543541 .. 2543552 -  -5.8  -4.19276   GGAAAAGCTGGAAAA                GGGT GAGC ACCC                 CCTGGAAAGAATCAT  66 479
 GF1_RS11205 NONE
 GF1_RS11200 2541528 .. 2541545 -  -4.1  -3.30771   TGACAGGCCCCAGAA             CGGCA TGGCCCTG TGCCG              GCTGTGCCACTGGTC  47 483
        urtA 2530743 .. 2530771 - -13.8  -4.15197   CAAACAGTACAGAAA        GACGGGGGCGGC AGAAG ACCGCCCCCGTT        ACAGCTGGCCGGTCA 100 43
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
 GF1_RS11140 2525475 .. 2525493 -  -6.6  -4.36914   TGTTTTTTCAGAAAA             CCCTGTCC TCA GATCAGGG             TCGGAGATGAACGGC  75 126
        ureA NONE
 GF1_RS11130 NONE
        ureC NONE
        ureE NONE
 GF1_RS11115 NONE
        ureG 2521037 .. 2521056 -  -2.1  -3.98256   TCCTGACGAAAAATA            CGATGGT CATGTT ACCACCA             TTACCACACTGCTGG  54 324
 GF1_RS11105 NONE
 GF1_RS11100 2517589 .. 2517609 -  -6.1  -4.12456   ACAGTATCTGCAAAA           GGCC-GCC CTGCAC GGCTGGCC            CATGGCCCAGTTTCT  69 211
 GF1_RS11060 2508257 .. 2508272 -  -6.2  -3.24059   GTAAAACATATTCAA              TCTGTA ACTA TACAGA               GGGTAGAGTGCAATG  54 122
 GF1_RS11055 NONE
 GF1_RS11050 NONE
        ssrS 2507129 .. 2507139 -  -4.6   -4.7497   CCCACGGACGAAAAA                 GCCC ACT GGAC                 GGGTTACGCATATAT  75 180
         rny 2505247 .. 2505257 -  -5.4  -3.11634   TTTCATACCATTCAA                 TCCA GCG TGGA                 TTCTCCACCACTCCG  50 62
        tyrS 2503924 .. 2503950 - -19.4  -3.71649   CGCTTAAACGTCAAA         GGCGGCAGTCCC TCT GGGGCTGCCGCC         TTTTTTGTTTGCTTA 100 98
 GF1_RS11020 2500503 .. 2500521 -  -4.5  -4.08887   ATCACGGAAATGAAA             TCACGTG GCCGG CACGTGT             CACTCAACTATTTCA  62 257
         pal 2495689 .. 2495715 -   -13  -4.78848   CGGGCAAACACAAAA         CCGGGAAAGAGC AGG GCCCTTTCCCGT         AAACTCATGGTTCTC 100 135
        ltrA 2493594 .. 2493638 -  -8.6  -2.71791   ACCGGCGGCCCAAAT CGAGTAGGGTGAGGCAAG TTAATTACG CTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  60 73
 GF1_RS10990 NONE
 GF1_RS10985 2492011 .. 2492030 - -10.6   -5.7946   CGGGCAATAAAAAAA            GGCCTCCC GGAA GGGCGGCC             CGCTATCCCGGCGAC 100 131
 GF1_RS10980 2490915 .. 2490931 -  -3.7  -4.05991   AATAGATACGAGAAA              CTGTCAA CCG TTGACAC              TCCGCTACTCGATAT  60 30
 GF1_RS10975 2490496 .. 2490520 -  -2.1  -2.73159   CGAAGGCGCGGAAAT          GACAAGTATGA AGC CCTTACTCATC          GTTATTCTCCTGGAA  39 17
         gmk 2489921 .. 2489931 -  -2.4  -2.87944   TACCATCAGATGATA                 CCGG GGA CCTG                 GGTCCCGTCTATCCG  41 5
        rlmB 2488938 .. 2488952 -  -2.1  -4.66833   GTGGAACGGGAAAAA              CAGCGG ATAT CC-CTG               GTTCCGGAGGACTTT  66 172
 GF1_RS10930 2482362 .. 2482377 - -10.4  -6.15717   CAAACACAAAAAAAA              CCTGGC CAAA GCCAGG               TTTTGAAAAGAGCAG 100 229
        ltrA 2480263 .. 2480307 -  -8.6  -2.60615   ATGCCGGGCAAACAT CGAGTAGGGTGAGGCAAG TTAATTACG CTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  59 73
        ltrA 2478172 .. 2478216 -  -8.6  -2.60615   ATGCCGGGCAAACAT CGAGTAGGGTGAGGCAAG TTAATTACG CTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  59 73
        ltrA 2475951 .. 2475963 -  -9.1  -4.72007   TCTGACGAAAACAAA                CCAGC ATA GCTGG                ACAAAACCTGCCACC  91 235
        mqnB NONE
 GF1_RS10900 NONE
        mobB 2471491 .. 2471505 -  -3.4   -2.9302   GTCAAGGACAATAAG               GCCTGG GTA CCCAGC               GTGGTGGTAACCGCG  42 465
 GF1_RS10885 NONE
        gdhA 2465547 .. 2465593 - -10.1   -4.3129   GATTCACGATCAAAA GATTTCAGGCGATGGTATCGC TTAAG GGGATACCATCGCCTGCGCCC GTCTAAACCAGCCCC  90 28
 GF1_RS10875 2464715 .. 2464729 -  -2.8  -4.18018   CGTCCTCAGGGAAAA               GAGG TCCTGCC CCTC               CATCAGGTCTTGCCG  60 28
 GF1_RS10865 2462975 .. 2463004 - -20.9  -4.54821   ATGGTAATCACAAAA       GAAAAAGGCCGGG AATT CCCGGCCTTTTTC        CTGTATATGGCTCTG 100 97
 GF1_RS10855 2460308 .. 2460331 - -18.2  -5.95539   GGGCAAACAAAAAAA          GGGGGATGGC CCGA GCCATCCCCC           TTTCTTATTCCGCAG 100 54
        ltrA 2458021 .. 2458061 -    -6  -4.62069   TTCGGAGCTGAAAAA CGTGGGCTGCGAGGCCTGTC ACG GCCCGGCCCGGC-G-CCACG GCAACACTCCGGACC  78 268
 GF1_RS10835 2453386 .. 2453408 -  -5.4  -2.92613   TTCCACCGGAAATCA           TCGACCTGGC CCT GCCGGCCCGA           CCTGTATGGCTGGAC  48 184
 GF1_RS10825 2451345 .. 2451362 -  -6.9  -3.15861   GACGACCTGGAGTAA             TTCCGGC CAGG GCCGGGA              AACAGGGCCCGGTCG  57 80
 GF1_RS10815 NONE
 GF1_RS10810 2449124 .. 2449143 -  -3.5  -3.53012   CCTGGTTCCTGGAAA            GGGTGGT ACGGAA AGCACCC             CATAACCACCTCCCT  51 258
 GF1_RS10805 NONE
        pyrR NONE
 GF1_RS10795 2446455 .. 2446468 -  -2.4  -2.81133   GACTCACTGATTATA               GTTG GGAAAT CAAC                GGACAGCGTCAACCA  39 21
 GF1_RS10790 NONE
        msbA NONE
 GF1_RS10780 2441363 .. 2441376 -  -5.3  -3.23279   CTGACAAATACAAAT               GTGAT TACC ATCAC                TGTTCAGCTTTGAAA  52 241
 GF1_RS10775 NONE
 GF1_RS10770 NONE
 GF1_RS10765 NONE
 GF1_RS10760 2436573 .. 2436595 - -14.8  -2.72144   GGATCGTGGTCAAAC           TCGCTGGCGG CGA CCGCCAGCGC           CCTCAGGTCATACGC  90 347
        ppsA 2424398 .. 2424416 - -13.8  -5.78622   GCAGGTCAAAAAAAA             GCGGGGCC AGA AGCCCCGC             TTTTTTTATTGCTGC 100 57
 GF1_RS10710 NONE
 GF1_RS10705 2418808 .. 2418818 -  -8.2  -2.81642   AGACGATTCAGCACA                 CCGC TCC GCGG                 TGTAAGAGACAGGTA  60 372
 GF1_RS10700 2416801 .. 2416816 -  -4.7  -4.63218   GGCTTGTCAAGAAAA              GTTCG ACGTGG CGAAC               CATTTTTTTTATAAA  72 306
        gspG 2415851 .. 2415904 -    -9  -3.62096   CTCGAGGAGGGTAAA GCCGTTATCAGGCCGTTGAAAAAC TATCAC ATTTTTCAACAGCCTGTTATGAGC GCGGACAGATGGACG  73 78
 GF1_RS10690 NONE
 GF1_RS10685 NONE
 GF1_RS10680 NONE
        gspK 2412980 .. 2413002 -    -7  -3.53761   TAATCCGTTCCCAAA           GGGCATGGTT TAC AAACATACCC           GTACTCGTGAACGTG  61 249
        gspL NONE
 GF1_RS10665 NONE
        gspN NONE
 GF1_RS10655 2409001 .. 2409012 -  -2.2  -4.60487   CAGGACGTTGAAAAA                CG-GC TGC GCGCG                CTCCATTTTTCAACA  66 173
        gspD 2406626 .. 2406649 -  -7.5  -2.78816   TCACCGCGGAGCAGA          GGAACGAGGC CTTCT GCCT-GTTCC          GTCTCTCTTCAGCTC  57 134
 GF1_RS10645 2406188 .. 2406198 -  -2.4  -3.30124   TGTCATCCTTCATAA                 CGGC CGG GCCT                 CTTTCTTTATTTTGT  45 9
 GF1_RS10640 2405730 .. 2405763 -  -2.9  -4.66833   CGTCAACCTGAAAAA     CCTCGTGACACCCGC TCCT GCGGGAGTGACGCCA      GACCTTTGCTGGAAC  68 119
        gspE 2403806 .. 2403816 -  -2.4  -2.67803   TTCTTATGAAAGCGA                 CTGC CCT GCCG                 TATACTTGCAATTCT  38 59
 GF1_RS10630 NONE
 GF1_RS10625 2402179 .. 2402215 -    -3  -6.15717   GAAACAGAAAAAAAA   TGGCA-GTTGCCTGAAA ATCA TTTCAGGGGCCCTGCCA    GATGAAACAGGCGAG 100 384
 GF1_RS10620 NONE
 GF1_RS10615 NONE
 GF1_RS10610 NONE
 GF1_RS10605 2396110 .. 2396123 -  -2.3  -3.92276   ATCACACATAAAATA               CGCTT TTTC ATGCG                GCCACCAGTCGTGCG  54 19
        wecB 2395011 .. 2395031 -  -3.1  -2.98666   GAAAAATAGAGCAGA            TGCATCCGG TTA CCGGGGACA            GCTCCCTAGTATGGA  43 14
 GF1_RS10595 2393898 .. 2393909 -  -5.8  -2.87564   TGATGTTTTCATATA                CTGG CAAC CCAG                 TCCTTTACCTTTAAA  52 7
 GF1_RS10590 NONE
 GF1_RS10585 2392029 .. 2392047 -  -7.4  -2.71268   GTGCAGGAGACAGGA             GCCCCT GGAACGG AGGGGC             GTGGCACCGTGGAAC  57 75
 GF1_RS10570 NONE
 GF1_RS10565 2385795 .. 2385805 -  -3.2  -3.24747   GGGTGAGAGCAGCAA                 CACG TAT CATG                 ACCCGTTCCTTGCCC  45 21
 GF1_RS10560 2384749 .. 2384759 -    -4  -2.63549   CATCGGCAATAAGAT                 TTTG ATT CAAA                 GTACAGAGCCAAACA  43 21
 GF1_RS10555 2383546 .. 2383560 -  -4.2  -3.41292   AGCTTGAAGAGAAGA               CACCAA CGC CTGGCG               CTACTTCGTCGGCTG  49 74
        asnB 2381377 .. 2381390 -  -2.3  -3.90586   ACACGACTGCACAAA               TCCGG GGCA CCTGA                GACGACTTGCATTCT  54 110
 GF1_RS10545 NONE
 GF1_RS10540 NONE
 GF1_RS10535 NONE
 GF1_RS10530 2376865 .. 2376884 -  -2.1  -4.41494   CATGGGCAAGCAAAA            TTCCGTG ATATGG CAGGGAA             CCATCGGGTATCCTT  60 284
 GF1_RS10525 NONE
 GF1_RS10520 NONE
        grpE NONE
 GF1_RS10510 NONE
 GF1_RS10505 NONE
 GF1_RS10500 NONE
 GF1_RS10495 NONE
 GF1_RS10490 2368029 .. 2368041 -  -9.1  -2.72511   GCCAGGCCGGCAAAT                CCGGT GGC ACCGG                TCAGCAATATTCTGC  63 162
 GF1_RS10485 2365952 .. 2365965 -  -4.5  -2.97667   TCAGGTACGAAAGTA               TCGGG TAAA CCCAA                TGTCTTCCTGTATTG  47 404
 GF1_RS10475 2363457 .. 2363479 -  -2.7  -2.69647   AATCCTGATAGATTA           GAGACCG TTTTGCATT CGATCTC           ACCAGTTTCCATTTC  41 51
 GF1_RS10470 NONE
 GF1_RS10465 2361182 .. 2361196 -  -3.4  -3.85817   ATTGCGGTGCAGAAA               CGGACA TTA CGACCG               CTATATTACCGCTCA  55 64
 GF1_RS10460 NONE
 GF1_RS10455 NONE
 GF1_RS10450 NONE
 GF1_RS10445 NONE
 GF1_RS10440 2355579 .. 2355590 -  -4.4  -4.61687   GCAAACAAAAAAATA                CTGT CGAG ACAG                 GAAACCCCGTTTACC  72 71
 GF1_RS10435 NONE
 GF1_RS10430 NONE
 GF1_RS10425 NONE
 GF1_RS10420 2350390 .. 2350400 -  -2.4  -2.61582   CAGTCTATCCACAAT                 CTGC ATT GCTG                 TCAATAACCTGAAAC  38 73
 GF1_RS10415 NONE
 GF1_RS10410 NONE
 GF1_RS10405 NONE
 GF1_RS10400 2347197 .. 2347232 -  -5.4  -3.25505   AAAATGAGAACAAAG    GTATTCGTGTACGTTA ACGT TAACGAGCACGAGCAC     GTTCACGGGATAGTT  52 484
 GF1_RS10365 NONE
 GF1_RS10360 2340022 .. 2340050 -  -7.4  -2.60688   GAACGATTCCATAAT       CCACGGTCACCGC TCCT GCGGTGCCC-TGA        CGTACCCGGAAGGAA  56 60
 GF1_RS10355 2339217 .. 2339232 -    -9  -5.93809   GTTCCATAAAAAAAA              GCTGCT GAAA AGCAGC               TTTTTCAAAGGATCG 100 88
 GF1_RS10350 2336581 .. 2336611 - -11.1  -4.52873   TTTCGACAAAAACAA       GCGACGGGATCGC GGGAA GGGATCCTGTCGC       GGAATACGATTAAAT  95 35
 GF1_RS10345 NONE
 GF1_RS10340 NONE
 GF1_RS10335 2331861 .. 2331884 - -10.2  -2.60079   CGATTCCATAATCCA          CGGTCACCGC TCCT GCGGTGCCCA           CTCTAACCTGGGAGG  66 420
 GF1_RS10330 NONE
 GF1_RS10325 NONE
 GF1_RS10320 NONE
 GF1_RS10315 2325318 .. 2325344 -  -4.3   -3.2614   CATCTTCGAGATGAA         CCAGCTGATCC GCTGA GGAACAGGCGG         GTTACTGTCCTTGGA  49 27
        recN 2320041 .. 2320076 -  -7.4  -3.17797   CCCACAGAGAGGTAA    CCCGTGAACGTCCACG TGCT CGTGCTCGTACACGTG     AACGAGAGTAAACAA  61 181
 GF1_RS10290 2318784 .. 2318807 - -10.2  -3.45118   CGATTCCATAATCAA          CGGTCACCGC TCCT GCGGTGCCCA           CTCCAACCTTGGATG  74 165
 GF1_RS10285 2317312 .. 2317327 -  -4.7  -4.63218   GGCTTGTCAAGAAAA              GTTCG ACGTGG CGAAC               CATTTTTTTTATAAA  72 306
 GF1_RS10280 2315223 .. 2315260 -  -8.3  -4.25064   AAAGGGAAGAAAGAA   GTTCGTGGACGTGTACG TTAA CGTTCACGAGCACGAGC    ACGTTCACGGGATGA  78 275
 GF1_RS10265 NONE
 GF1_RS10260 NONE
 GF1_RS10255 NONE
        ruvC NONE
        ruvA NONE
        ruvB 2307508 .. 2307518 -  -3.2  -5.58454   CGGACACGAAAAAAA                 CAAC CGT GCTG                 CGCAAGAACACCCCC  91 44
        mraZ 2305232 .. 2305244 -  -5.5  -2.62184   TCCCCGGCTACAGGA                TCCCC AGC GAGGA                AAGTCCCTGTTCGAA  47 5
        rsmH NONE
 GF1_RS10220 2303611 .. 2303637 - -10.9  -2.78032   TGCCCCTCAAAACAG         GTTCAGCGGAC TCGAT GTCCGCTGAAG         AAGATGGCCTTTGGT  70 305
 GF1_RS10215 NONE
 GF1_RS10210 2301938 .. 2301948 -  -2.4  -3.48276   CCCTGGTTCAGATAA                 CCGG CTC CAGG                 GTCAACACACATTCC  47 7
 GF1_RS10205 2298736 .. 2298749 -  -9.5  -2.76315   TCAACAGTGTGAAAT               GGCGG TGGA CCGCC                TGTTCAACTCAACTG  63 29
        mraY NONE
        murD NONE
 GF1_RS10190 NONE
        murG NONE
        murC NONE
        murB 2292336 .. 2292367 -  -6.4  -2.71364   CGACCGCTGGAAGCA      CCCCGCACACGGCG CAGC CACCCCGTGCAGGC       CGACAACATCCTGCC  51 192
 GF1_RS10170 NONE
        ftsA NONE
        ftsZ 2288716 .. 2288736 - -16.9  -5.05505   AGCACAAAGCAAAAA            GCCCGGACA CCA TGTCCGGGC            TGAAATGACAGATTA 100 110
 GF1_RS10155 NONE
 GF1_RS10150 NONE
 GF1_RS10145 NONE
 GF1_RS10140 NONE
        fetB NONE
 GF1_RS10130 2281144 .. 2281195 -  -9.2     -2.54   AGTACCGGACAACAC GCCCCGTTCACGTGCTCGTGCACG TGAA CGTTAACAGGCACGAGCACGGCGC CCGCGATGTTATCCC  62 90
 GF1_RS10100 2275034 .. 2275044 -  -3.2  -2.81272   GATTACCACTGAAAT                 TCAG CCA CCGA                 TACCGGTTTCAATGC  41 2
        crcB NONE
 GF1_RS10090 2274151 .. 2274169 -  -4.4  -3.40775   ACCCGGATTGAAAGA             GCAGCCGG GTA CAGGGTGC             AGAGATCGGCCATCA  51 38
 GF1_RS10085 2272296 .. 2272342 -  -6.3  -2.71712   CTTTTCCTTGGAAAG TTTATCTCGCCCCGGGGGCCGG TCAA CCG-CCCCCGGGGCTGGCCGAG GCCTACTGCTGCGGA  51 28
 GF1_RS10080 2270571 .. 2270593 -  -4.1   -4.4767   CCATTGACGACAAAA          GCGG-GTACC GTCC GGTAATCCGC           TTCCCTATTGTTTTC  67 71
 GF1_RS10060 2267284 .. 2267305 - -15.9  -5.72207   GGCAAACTAAAAAAA           GCCCCTCCA GCAA TGGAGGGGC            TTTTTTTGTGCAGTA 100 150
        ltrA 2264901 .. 2264923 -  -3.2  -4.93296   TGAGCAGCAGAAAAA           GGCGGTTGCC TGT GGCCACTGGC           CGCTGTACCGGTACA  76 381
        pabB NONE
         dgt NONE
 GF1_RS10025 2256310 .. 2256324 -  -2.8  -2.86271   TCCCGAGCAGAACGA               TCTCCG CGG CAAAGA               ATATCCCGGCTATGG  42 35
 GF1_RS10020 2255025 .. 2255049 -  -2.8  -5.71712   GCCGACATAAAAAAA         GGGAGCCACGC CAGC ACGCA-CTCCC          CCTGAAGCCACCCCT 100 57
 GF1_RS10015 2254358 .. 2254394 -  -5.8  -3.05798   CGAAACGAAAAACAC   CCCCATCCGG-GCC-GCT CGG AGCCGGAACCGGACCGGG   CACCGAGTCGGCACC  53 149
 GF1_RS10010 2253593 .. 2253608 -  -5.4  -3.23042   AACATGCAGGATTAA              GTCCTGG ATT CCAGG-C              TCCGGGAACAATACA  52 369
 GF1_RS10005 NONE
 GF1_RS10000 2250825 .. 2250837 -  -9.1  -3.53012   CTGTCTGCGGCTAAA                CCAGC ATG GCTGG                GCCAGGTAAGCGACC  71 263
 GF1_RS09995 NONE
 GF1_RS09990 NONE
 GF1_RS09985 NONE
 GF1_RS09980 NONE
 GF1_RS09975 NONE
 GF1_RS09970 2243504 .. 2243514 -  -4.6  -2.52464   CGTCTCCCTAATCCA                 CCCG CAG CAGG                 GTCAATCTTTCCGGG  44 7
 GF1_RS09965 2242611 .. 2242632 -    -3  -3.90707   CCTGAGTAAAAAAAT           TCAGATAC ACGTAA GTATCTGG            GCGAGTTCCGAGAGC  55 4
 GF1_RS09915 2234535 .. 2234561 -  -8.7  -5.56264   GGCAAACACAAAAAA         GCTCATTCCAC AGCAA GCGGAAAGAGC         TTTTTTGTGTTGATT 100 55
 GF1_RS09910 NONE
 GF1_RS09905 NONE
 GF1_RS09900 2231639 .. 2231649 -  -4.6  -3.33744   CCGCCCTCGAAAAAT                 GGCC CTG GACC                 CAGTCGCGATTCCAC  51 69
 GF1_RS09895 NONE
 GF1_RS09890 NONE
 GF1_RS09885 2226648 .. 2226675 -  -3.5  -4.04576   AGCCAGACAATCAAA        GGATATTTTCA GATTCT TGAAGATACCC         TGCTCGGCAGATGGC  58 495
 GF1_RS09875 NONE
 GF1_RS09870 NONE
 GF1_RS09865 NONE
 GF1_RS09860 NONE
 GF1_RS09855 2218977 .. 2218990 -  -2.3  -2.91276   CGTCGTGTTAGAAAT               CCGTT CGAC ATCGG                TTATCGTCACCACCC  41 56
 GF1_RS09850 2218321 .. 2218357 - -27.5   -4.1523   CTGACGACATAGAAA    GGCTCTGACAGGGTGCA ACC CGCACCCTGTCAGAGCC    TGCAGGCCGGCCTGC 100 76
         sat 2216664 .. 2216685 - -12.3  -5.56264   GGCAAACACAAAAAA           GGAGATGCC ACCT GGCACCTCC            TTTTTTCTAATTCCA 100 57
        ltrA 2214567 .. 2214611 -  -8.6  -2.60615   ATGCCGGGCAAACAT CGAGTAGGGTGAGGCAAG TTAATTACG CTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  59 73
        ltrA 2212386 .. 2212402 -    -8  -4.65895   GCGTGTACCGAAAAA              GGTACC ATCAG GGTACC              AGATTATCTCACCGC  84 191
 GF1_RS09830 NONE
 GF1_RS09825 2211214 .. 2211233 -  -7.1  -3.57144   CTCCGCACCCTGAAA            GCGGCAA CGATAC CTGCCGC             ATTGTCCCTGAAATT  63 39
 GF1_RS09820 2210266 .. 2210288 -  -7.6  -3.92522   CGGTAACCGGACAAA           GGCTGCCGAG TTG CTCGGCATCA           GCAGGAAAAATCTGT  68 182
 GF1_RS09800 2206441 .. 2206454 -  -2.4  -4.37886   CGACTCTGCACAAAA               GTTC GAACCT GAAC                TGAGTGATTTTCAAA  60 61
 GF1_RS09795 NONE
 GF1_RS09790 2203300 .. 2203311 -  -4.4  -4.95155   GGGACAGCAGAAAAA                CACA ACCC TGTG                 ACTGCATAACCCTCT  79 224
 GF1_RS09785 NONE
 GF1_RS09780 NONE
 GF1_RS09775 2201201 .. 2201232 -  -6.7  -3.18366   TGCGCAAGGAAGAGA      CCCGTTGATTAGAG TGATG CTCTA-TCAAGGGG      TTGATGACGCAGCGT  57 304
        ftsH 2198904 .. 2198929 - -20.5   -5.8187   CAGGCAACAAAAAAA         CAGCCCGCTGC GTTC GCAGCGGGCTG          TTTTTTTTATCCAAA 100 288
 GF1_RS09730 2191102 .. 2191112 -  -6.8  -5.03145   GAAGTTTTTAAAAAA                 CCTG GGG CAGG                 ATTCCGGCAGGAACT  90 86
 GF1_RS09725 NONE
 GF1_RS09720 2188874 .. 2188886 -  -3.3  -3.53811   TGGATGCGGTCGAAA                GCGAC GCA GTCCC                TGTACGTTTTGTTCG  49 42
 GF1_RS09715 NONE
 GF1_RS09710 NONE
 GF1_RS09705 2185986 .. 2186044 -  -2.2  -2.66257   CGAAAAAGTAAAACC TGAATCCTGCAGTCGTCATGCGGTCTCG TCG CTCGAATGCCGGATAACGGCAGGATTCA GGTGAAAAGCCAATC  38 52
 GF1_RS09685 NONE
 GF1_RS09680 NONE
        nrfD NONE
 GF1_RS09670 2179406 .. 2179438 - -19.2  -5.00616   TTCCGTGGTAAAAAA      GTCCCCGGACTGCG GAGGG CACAGCCCGGGGAC      AGGATAGGCAGGTAA 100 56
 GF1_RS09665 2178725 .. 2178738 -  -9.5  -5.78622   CGATGTGAAAAAAAA               CCCCG AATT CGGGG                CTGAAATCACCGGTG 100 65
 GF1_RS09660 2177116 .. 2177128 -  -7.7  -4.07568   GCCGGTGTCTGAAAA                CCAGA AAT TCTGG                GGATCACGGGCTGTT  74 39
        rpoZ 2176619 .. 2176647 -    -6  -3.53224   GATGGTTGCGGGAAA       GAGG-CCTGGCCAG ATT CTG-CCTGGTCCTC       CTGGCGGGTGAAGCA  58 51
        dnaJ NONE
        moaC NONE
        dksA 2174446 .. 2174463 -  -6.9  -2.78197   TGCGAGACACAGAAC             GCCCGCA GCTG TCCGGGC              TATCTGCCCTGGGCT  53 25
        galT NONE
 GF1_RS09630 2172786 .. 2172840 -   -16   -2.6927   ATTCTGGATACACCA CGAAAAACACGAAGTACGCAACAC GGTCTGG GCATTGCACACTTCGTGTTTCCCG GGATGAAATGTCTTT 100 191
 GF1_RS09625 NONE
        glyS 2169704 .. 2169724 - -13.3  -5.88197   GCAAACACAAAAAAA            GGCTGCTCA ATT CGAGCAGCC            TTTTTTTGTGTCTTT 100 226
        ltrA 2167577 .. 2167597 -  -8.3  -4.45738   CATCCGAAGAAGAAA            TAACCGGCT GAC AGCAGGTTA            GAGGCAAATCGAGTA  85 127
 GF1_RS09595 NONE
 GF1_RS09590 NONE
        nrfD 2161393 .. 2161425 -  -6.2  -3.53012   GCGGCCTGGCGGAAA      CGGGCGGAAGAACC AAAGG GGTTATTCTTCCCG      GTTGATAATGGGAAT  58 14
 GF1_RS09580 2158824 .. 2158852 -   -16   -6.0427   ATCACATAAAAAAAA        CGCCCTGCCGGC AAAAA ACCGACAGGGCG        CTCTCAGGGATTCAA 100 60
        rpmB 2154430 .. 2154458 - -12.4  -4.64861   CGGTGGCAAAAGAAA        GGGGCGAGAAGA AAAAA TCCACTCGCCCC        TTGACTCATGTCCTG 100 50
 GF1_RS09560 2153972 .. 2153995 - -13.8  -5.58522   GATAGAAAAGAAAAA          GCCGGGGAGC AGCA GCTCCTCGGC           TTCATGGACCCAGTA 100 71
 GF1_RS09540 2148210 .. 2148220 -  -6.8  -3.31461   CACGTAGGCGCAGAA                 CACC CAG GGTG                 ATGGCATGTCACACC  59 63
        mtnA 2137603 .. 2137615 -  -2.6  -3.36327   TCAGTGGAGCCATAA                CGGG TCGAT CCCA                ATCTTTGCCGGAAAC  45 42
 GF1_RS09495 2136910 .. 2136923 -  -3.8  -4.07687   ACCTGGCCCTGAAAA               CAGG TTTTCC CCTG                TTGCACGATATGGAA  60 55
 GF1_RS09485 NONE
 GF1_RS09480 NONE
 GF1_RS09475 NONE
 GF1_RS09470 NONE
 GF1_RS09465 2130093 .. 2130107 -  -5.6  -4.18018   GGCGGCCAGGGAAAA               GACCGG ATC CGGGTC               GGCACCGTTATCAGT  67 36
 GF1_RS09460 2128561 .. 2128582 - -15.9  -5.01811   CCAGTAAATGAAAAA           CGGCCGCAA CTCA TTGCGGCCG            TTTTTTTGTTCTTTT 100 185
 GF1_RS09385 2114937 .. 2114948 -  -4.4  -3.40403   CGGCGGGGAGGAGAA                CTGT TCTC ACAG                 CGGTATTGACAGCAT  51 20
 GF1_RS09380 2113439 .. 2113467 - -10.1  -3.86202   TTGTAGTACATGAAA        GGCGCCACCGGGC CAT GCCGGGGGACACC        TTCCGATCTCCTGTA  81 61
 GF1_RS09375 2112688 .. 2112703 -  -3.2  -3.60316   AGGCCGTTAAAAAAC              GCAGTT TTTC AACGGC               CTGCTATGAGCGTAT  51 29
 GF1_RS09370 2110851 .. 2110877 -  -9.4  -5.40072   GTCTGCTCAAAAAAA         TCCGGGGCCA CGACATC CGGCCCCGAA         ACAGAGATATCAACT 100 148
 GF1_RS09365 NONE
 GF1_RS09360 NONE
 GF1_RS09355 2108124 .. 2108154 -  -9.8  -5.00136   AAAGAAAATAGAAAA      GTCCA-GCTGCCG TCAGGG CAGCAGCCTGGAC       CAGGTAACAATGGTT 100 48
 GF1_RS09350 2106839 .. 2106850 -    -3  -3.73816   AATATCATATTGAAA                TTCT TAAA AGAA                 TGGTGGCTAGGCCAT  52 450
 GF1_RS09320 2100386 .. 2100416 - -16.9  -6.10295   TCAAGACAAAAAAAA       GCGCCTGCCACGA CGATC CCGTGACAGGCGC       TCCAATCCCTTTCCT 100 42
        mqnE NONE
        mqnC 2098030 .. 2098040 -  -3.2  -4.55491   CAGTCAACCAGAAAA                 TGGC TGA ACCA                 TACCCGGGACCGGAG  65 101
 GF1_RS09305 NONE
 GF1_RS09300 NONE
 GF1_RS09295 NONE
 GF1_RS09290 NONE
        ubiA NONE
 GF1_RS09280 2092573 .. 2092603 -   -11  -3.02649   ACTGCAGCAGATACA       GCGGCCGCTGCCAG TTT CTGGCAGCGGCTTT       TTTCTTTTTTTCTGA  72 279
 GF1_RS09265 2090379 .. 2090392 -  -2.3  -3.06183   TCCAGCCCCATGCAA               CCGCA GTGT TGCCG                GTAACCACATTGGTC  42 48
 GF1_RS09260 2089602 .. 2089612 -  -2.4  -4.57921   CAGAAGAAAAAAAGA                 CAGG GAA CCGG                 AGGTATTGCACCACT  63 47
 GF1_RS09255 2087972 .. 2087988 -  -2.1  -3.63627   CCCTGACATGTCAAA              TGAGCAG GTA CAGCACA              GTCATCTTTGTGATG  49 239
        ltrA 2085757 .. 2085776 -  -2.1  -3.69323   TGATTACCACTGAAA            TTCAGCC TTCGAT GGATGAA             GGTGTCGGCCTCACT  49 281
 GF1_RS09245 NONE
        istA NONE
        istB 2083059 .. 2083077 -  -3.8  -4.74103   CCGGCAATGGAAAAA             CCGGTATA AAG CATACCTG             CTGTCAATAGCCAAA  73 213
 GF1_RS09225 2082477 .. 2082505 -  -2.6  -4.28361   TGAACCTTACCAAAA       GATTATCCAAACA TTAT CATTTGG-TAATC        CTGGCTGATTTTTTC  58 218
 GF1_RS09220 2081672 .. 2081693 -  -5.8   -4.1891   TTGGGTGAACATAAA           TCTGCGCC TACCAT GGCTCAGA            ATGCCCTTCACCGGG  70 113
 GF1_RS09210 NONE
 GF1_RS09205 NONE
 GF1_RS09200 2076743 .. 2076760 -  -3.4  -3.84027   TGATCAAAAATAATA             CAGTCA TGCAGC TGACCG              TTTTCTCCTGTACAG  53 11
 GF1_RS09195 2076252 .. 2076265 -  -3.7  -5.00616   TGCCGGCTCAAAAAA               GGGGC TTCT GCCCG                GGACCTATGAGCCAA  76 30
 GF1_RS09190 2075217 .. 2075241 -  -2.7  -2.63164   GCAGATTGAAGGAAT          CAGCTGTCTTC TCT GAAGGTGGCTG          GCTTTTATGCATCAG  40 37
 GF1_RS09185 NONE
 GF1_RS09180 NONE
 GF1_RS09175 2070823 .. 2070840 -    -4  -5.51046   CAAACAGACAAAAAA             CGGAGC GATTCA GCGCCG              CTGAACGCGTAGCCT  93 17
 GF1_RS09160 NONE
 GF1_RS09155 2066254 .. 2066266 -  -5.5  -2.64466   AATCCATGAAGGAAG                CAGAC CAA GTCCG                AAAGATTACTCATCG  47 78
 GF1_RS09105 2058029 .. 2058057 -  -7.3  -2.60496   GGGCGTCTGAAACAG        GGGCATGCCCGAC TCA GTCGGTGATGTCC        GGTTCAAAAAAGAGC  52 10
 GF1_RS09100 NONE
        pepN 2054873 .. 2054894 -  -4.3    -3.794   GGTCAACCGATGAAA           TCGTCCAGG CAAG CCTGGACCG            CTGGACTGTTGAGGA  57 387
 GF1_RS09080 2050212 .. 2050232 -  -7.6  -3.39784   GGATCCTGAACAACA            TCCGGTTG CAGAT CAACCAGA            ACGGCAACGTGGTCG  61 359
 GF1_RS09065 2045567 .. 2045593 -  -4.9  -3.83502   CACTGGGATAGGAAA         CGGTTCCTGCG GCGGA CGCCGGTGCCG         GAAGAAAGTGGAAGA  59 83
 GF1_RS09020 NONE
 GF1_RS09015 2032733 .. 2032778 - -17.5  -2.64274   ATCTGCTGAAACCGA CCCGCCGCCCCTGCGACCACG AAAT CGTGGCCGCAGAAGCCAGGGG CCCCACTGGTTTCAG 100 95
 GF1_RS08980 NONE
 GF1_RS08975 NONE
 GF1_RS08970 NONE
 GF1_RS08965 2020736 .. 2020746 -  -2.4  -3.07816   TCTCCATGTAGTTAA                 CAGG TTG CCGG                 CACATCCGGATCACA  42 36
 GF1_RS08960 NONE
 GF1_RS08955 NONE
 GF1_RS08950 2017795 .. 2017843 -  -6.2   -3.6682   TTGGACGCATGGAAA TCACCAGAAATTGAAGGGTA AAAGTGCAA TAACCTGCAATTTATGGTGA TATAATTTAGCAAAA  60 166
 GF1_RS08945 NONE
 GF1_RS08940 2015722 .. 2015740 -  -3.1  -3.15544   GGCGACTGGGACGAA             CTGATTC TCGCT GAGTCAG             AATCGGCCATCCTTG  45 370
 GF1_RS08935 2013224 .. 2013262 - -17.6   -3.1372   GATGGGTTATCAATA   CACCTGTGCAAGTTGTGC ACT GCACAAGTCGCACAGGTA   TGCAAAAAAATTTGT 100 164
 GF1_RS08930 NONE
 GF1_RS08925 2010379 .. 2010389 -  -2.4  -2.78384   CCGGCCGGCATCACA                 GGGC CTT GACC                 TTGCAGAACTCCCTG  39 10
        cybH 2009646 .. 2009677 - -15.1  -3.00071   ATAAAAAAAGAAGAG      GTCCGGAGGCCGC GCTAAG GCTGCCCCCGGAC       GGGAAATCATGATTT  93 32
 GF1_RS08910 NONE
        hypB 2007910 .. 2007941 - -11.6  -4.07687   AGCTTCGCTGCAAAA      CTCGGCTGTGCCACG GCT CATGGCACGGC-GAG      AGCGCGGCATCAATC  91 212
        tadA 2005694 .. 2005716 -  -4.8   -5.1523   TTGACAACAGAAAAA           TACCGTTATC GTC GAGAACGGAA           AAAATTTTTCAGGAG  81 8
 GF1_RS08890 2005458 .. 2005485 - -11.2  -2.68282   ATGAAGTACTATAAT        TCCCCGGCAGCC AAAA GGCAACCGGAGA         TGCACAGTATCAATG  69 39
         ffs 2005301 .. 2005317 -  -4.3  -5.12707   GGAAAGCTGAAAAAA              GGATAGC CGG GCAACCC              TGCAACACACAAAGA  81 10
        dnaX NONE
 GF1_RS08875 NONE
        recR 2002118 .. 2002141 -  -2.6  -3.79482   AACATGATAACATAA          CAAAAAATAT CGAT ATATTTTCTA           GCCCGCATATTTCAC  51 230
         ndk 2001543 .. 2001583 -  -6.1  -5.60993   GCCCTGACAAAAAAA  GGGACCAAGCGCGGC AGGGGAGAGAG GCCACGTTCGATCCC  TTTACACCTCCTGCG 100 71
 GF1_RS08845 NONE
 GF1_RS08840 NONE
 GF1_RS08835 NONE
 GF1_RS08830 NONE
 GF1_RS08825 NONE
 GF1_RS08820 NONE
 GF1_RS08815 1990460 .. 1990501 - -10.1  -2.83449   ATATTGTCACAACCA TTGCCGGAGCGGTAACGGA ACAG TCCGTAACCACCCAGGAAA  TATCCCGCAGTATCA  63 351
 GF1_RS08805 NONE
 GF1_RS08800 NONE
 GF1_RS08795 NONE
        hypA 1983250 .. 1983262 -  -3.3     -3.94   GGAACGCTTAAAGAA                GGACG GGT CGTCA                CCCCGGACAAGCACC  55 204
 GF1_RS08745 1971293 .. 1971318 - -14.7  -5.37593   GGGCAAACTAAAAAA         GAACGGGGGCC TTCG GGCTCCCGTTC          TTTTTCTGCCACCGG 100 68
        ltrA 1969196 .. 1969240 -   -10  -2.60615   ATGCCGGGCAAACAT CGAGTAGGGTGAGGCAAGGT AATTA AGCTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  66 74
        ltrA 1967106 .. 1967150 -   -10  -2.60615   ATGCCGGGCAAACAT CGAGTAGGGTGAGGCAAGGT AATTA AGCTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  66 73
        ltrA 1964997 .. 1965043 -  -6.5  -5.32396   AGAGTAAAAACAAAA TCGAGTAGGGTGAGGCAAGGT AATTA AGCTTGCCTCATCCCTCTCAC AGAACCGTACGTACG  95 72
 GF1_RS08720 NONE
 GF1_RS08715 1962440 .. 1962475 - -11.1  -2.55544   TCACCAGGGAAGTTA    CCCGGGGAGGACAGGT AATCA ACCTG-CCGGCCCGGG    AATTTGCCCTGCTCG  66 284
 GF1_RS08695 1957709 .. 1957728 -  -3.6  -2.82742   ACCCTGGTAGAACGA            GTGGTTACC GGC GGCAAC-AC            GTGGTGTCATCAAGA  43 106
 GF1_RS08690 NONE
 GF1_RS08685 1953549 .. 1953559 -  -8.2  -5.42198   CCGGAAAAAACAAAA                 CCGG TCG CCGG                 CGCCAGTGTGGAGGA 100 344
        leuA NONE
 GF1_RS08660 1945556 .. 1945571 -  -7.6  -3.08133   GATGCATGGAGCGAA              GACGTA ACCT TACGTC               TCTGTATCCTCGTCA  59 358
 GF1_RS08650 1945392 .. 1945408 -  -2.1   -4.5442   TTCGGAACCATAAAA              CCAGGTG CGC CATCAGG              TCTTCACCACCGTAT  63 21
 GF1_RS08645 NONE
 GF1_RS08640 1943412 .. 1943440 - -21.8  -3.27704   ACGGCCTAAACTTAA        GAGGCCGCTGCC AGGAA GGCAGCGGCCTC        TTTTTTTATTCTCTC 100 70
 GF1_RS08615 1938259 .. 1938275 -  -2.9  -5.00616   GGCGCCGGCAAAAAA              GACAGGG AGT CCCTATG              ATAGTAGAGGAACGG  76 379
        ccsB 1934736 .. 1934769 -  -9.6  -4.87665   GGGGAGCGAGAAAAA     CATTCCACTGCGGC GGGGTG GCCACAGGAGAATG      GAAGGATCGACGGTG  95 95
 GF1_RS08590 1932458 .. 1932477 -    -7  -3.31322   GCCAAGCCCGGAGAA            CCCGCAGG AACG CCCCCGGG             TACAGGCCGGACATA  59 134
 GF1_RS08585 NONE
        selA NONE
 GF1_RS08545 NONE
 GF1_RS08540 1918560 .. 1918580 -  -2.6  -3.50588   AGCCTACATTAAACA           CCGCAAGAC TCGC ATCTTG-GG            ACAGCAGTGAAACGG  47 175
 GF1_RS08530 1917011 .. 1917030 -  -6.4  -4.06678   ACCTACGGACAGAAA            GAGGAGAG CCCT CTATCCTC             CTGAGAGGGCAGCAG  68 44
        moaA 1906784 .. 1906805 - -10.3  -2.60032   CCTTTTTTAAAAACT           GGATTATCA CCCT TGATAATCC            TTTGGGCAACCATGT  66 275
 GF1_RS08480 1906468 .. 1906489 - -15.9  -5.82281   AAAGACACAAAAAAA           CCCCGTCAG TAAC CTGACGGGG            TTTTTGTACTTTCTG 100 66
 GF1_RS08465 NONE
        larE 1900259 .. 1900280 -  -8.7  -4.94487   GTATAAAATAGAAAA           CAGCCGACA AAAA TGCCAGCTG            TTTTTTCAAATTCAG  93 509
 GF1_RS08450 1900024 .. 1900055 - -20.3  -6.01369   CAAACAACAAAAAAA      GGCTGTATCCCCC GCAACA GGGGGATACAGCC       TTATATTGTACCGGT 100 58
 GF1_RS08435 1896615 .. 1896632 -  -4.7  -4.25104   GTTTGCGGACGAAAA             CGGACCG GAGC CTGCCCG              GATCACGCTTGATCG  64 172
 GF1_RS08430 1895068 .. 1895088 - -11.1  -2.84325   GCGCTTCAAAGATCA            GTCAGCCGG TGC CCGGCTGAG            GGTGAAGCGATCTCG  71 86
 GF1_RS08420 NONE
 GF1_RS08415 NONE
 GF1_RS08410 1883684 .. 1883704 -  -4.1  -2.60032   GTCTCCCCAAAAAGG            CGATTTCAT CTC ATAAAATCA            AGCAATTATATTTTC  43 141
 GF1_RS08400 1879221 .. 1879241 - -11.1  -2.52464   TGGCGCTTGAACTCA            GTCAGCCGG TAC CCGGCTGAA            GGTGATTGGATTTTT  69 99
 GF1_RS08385 1876715 .. 1876767 - -19.1  -3.14463   AACTGCGGCCACCAA GCCTGGCCAGTAATTCCGGTCGCCC GTA GGGCTCCCTCCATTACTGGCCAGGC TTGAACCGCCATTTT 100 41
 GF1_RS08365 1872598 .. 1872627 -  -8.8  -5.03409   GCATAAAAAAAAGAA       TGATAC-TGCTGT TGCAG ACAGCATGTATCA       CGGAAACATCAAGAG 100 373
 GF1_RS08355 1871448 .. 1871505 - -12.2  -2.60032   GCTGCTCGAAAAATT CTGACA-TTGCTGCCACCCCCGCTGCA CGGTC TCCAGCAGGGGTGGCAATAACTATCAA CCTTTGCCGCTGGCA  76 22
 GF1_RS08310 1864564 .. 1864615 - -21.8  -3.03771   GGATAGCTGTGAACA GCAACGCCGCTCACGCTATCATCT TAAT AGTTGATAAGGTGAGCGGCGTTAC CGAACGCAGCTCAAG 100 109
 GF1_RS08305 1864214 .. 1864263 -  -6.7  -3.85817   ATCCTCCTTTACAAA CGAGGGAG-GATACACGGATTCCC GCCGA GGGAATG-G-GTATCACTCCCTCA TTGGGTGTTGTGTTC  68 47
 GF1_RS08300 1863151 .. 1863195 - -12.1  -3.66908   CTCCTTTAAAATCAA GGGGGCGCAAACCCGTCCCCA CCG TGGGGAAAAATTCACTCCCCC ATTTTTTGGTGGGTT  88 57
 GF1_RS08295 1862681 .. 1862712 - -20.2  -4.98531   CGGGCAAACTAAAAA      GCCCAAGCCCCGCC AAGG GGCAGGACTTGGGC       TATCAGTTAAACCTG 100 44
        ltrA 1860534 .. 1860572 - -13.9  -3.35597   CTTACCTCCCAAAGA  CACAAGGGGCAAGGCTCCC CAG GGG-GCC-CGCCCCTTGGG  GATGTTGCAATATCG  95 132
        radC 1859989 .. 1860026 - -17.7  -5.40072   GCCTCCTCAAAAAAA   CAGGGGCAAGACTACCC CCAG GGGCCGACTTGCCCCTG    GAAAGGGTTAATTCT 100 39
 GF1_RS08280 NONE
 GF1_RS08275 1858743 .. 1858779 -   -10   -5.7946   TTTTGAATAAAAAAA    GGGGCAAAACCCACCC TTTCG GGGCGTGAATTGCCCC    TTGTGGAAGGGTGTT 100 267
 GF1_RS08270 1857428 .. 1857474 -  -9.6  -5.26875   TCCTGAAGTAAAAAA GGGGAAATGCTGCACCTCACCC ACACA GGG-GAA-TACAGCACCTCCCC TGTGGGATGAAAAAA 100 241
 GF1_RS08265 NONE
 GF1_RS08260 1855277 .. 1855310 - -12.5   -5.9218   TATACAACAAAAAAA     GCCATATCCGCCCCC CTTG AAAGGCAGATATGGC      TTGAAAGGTAACCTG 100 47
 GF1_RS08255 NONE
 GF1_RS08250 1854549 .. 1854581 - -13.5  -5.68438   TGAGCAAATAAAAAA      GCCATATCCGCCCCC TTG AAAGGCAGATATGGC      TTAAAACACAACCTG 100 84
 GF1_RS08245 NONE
 GF1_RS08240 NONE
 GF1_RS08235 NONE
 GF1_RS08230 1851954 .. 1851982 - -11.2  -2.52464   GTCGGCCTGAAGCCA       CTGTC-GAAAAGG TGTA CCTTTTCAGACAG        GCGGCAAGACGATAC  69 219
 GF1_RS08225 1851149 .. 1851167 -    -6  -3.87815   TGTTATGCGCAGAAA             GGAGGT TGATCTT ACCTCC             TATAAATACAGGTCC  65 114
 GF1_RS08220 NONE
 GF1_RS08215 1849835 .. 1849850 -  -6.1  -4.47679   AAGCCAAAACAGAAA              CCGCT CTGGAT AGCGG               CCAACGACCTGGCGC  74 60
 GF1_RS08180 1843505 .. 1843517 -  -2.7  -4.09739   GGAATCGGCTCAAAA                TTCCA ATA TGAAA                ACAGGCGTAATTGGT  56 260
        ltrA 1837263 .. 1837302 -   -15  -3.41051   GTAGGTTCAGGACAA  CCCG-CCAGCTCCGATACC AAG GGAACCGGAGCCGGGCAGG  AACAAACCACGAGCG  87 523
 GF1_RS08140 1832125 .. 1832153 -  -7.7  -2.63073   CTGCTGCAACAATAT        TTTTTTTCATAGA GCC TCCATAAAAAAAA        TTCCGACTTCATCTG  56 82
 GF1_RS08135 1831299 .. 1831318 - -10.6  -2.71791   ATTTTGCGCGGAAAG            CCCCGTCC TCCA GGGCGGGG             AGGACGTTAGTCAGT  70 32
 GF1_RS08105 NONE
 GF1_RS08100 1826048 .. 1826060 -  -6.2  -3.00525   GCCTTGGAAATGACA                CGGC AACGG GCCG                GGCATACATCATCGA  51 518
 GF1_RS07955 1800211 .. 1800224 -  -3.7  -3.56037   ACAAACACGAAAAAG               GCCCC TTCA GGCGC                GCGCAAGCTCACACG  51 34
 GF1_RS07950 NONE
 GF1_RS07945 1798970 .. 1798980 -  -5.4  -3.21199   TACTGAGTAAGTTAA                 CTCA ATT TGAG                 GAATTCTCCAATTCA  52 38
 GF1_RS07940 1798660 .. 1798679 -  -3.5  -3.27525   TTTTTTTAAATCGAA            CGTGTTC CTCCAT GAACTCG             AACAGTACTTCGTTT  49 130
 GF1_RS07935 NONE
 GF1_RS07930 1797589 .. 1797602 -  -4.5  -3.28712   GGGCCGGGGTGACAA               GGCTGC GTA GC-GCC               CCGAAGGGGGCTTAG  51 187
 GF1_RS07925 NONE
 GF1_RS07920 NONE
 GF1_RS07915 NONE
 GF1_RS07910 NONE
 GF1_RS07905 1791705 .. 1791718 -  -2.3  -3.89212   GATCGAGAGAGCAAA               CAGAG GCGG CGCTG                GCATGGATACCAGGT  54 416
 GF1_RS07890 NONE
 GF1_RS07885 1787785 .. 1787798 -  -3.1  -2.70717   AATATACCAAATCCA               CTCAA AACG TCGAG                GAGCCAAAAGTTCTC  41 93
 GF1_RS07880 1786025 .. 1786041 -  -5.1  -4.62302   CAATACTTTGAAAAA              CCAGG GCTACCA CCTGG              AGCACAACTATGGAC  72 471
 GF1_RS07865 1783818 .. 1783865 - -29.6  -3.12668   CAGCTCCACATCTAA TTTCTGTTAGGTAACCCCCCGGC TTT GCCGGGG-GTTACCTAACAGAAA TTAGCGTGATCATCA 100 168
        ltrA 1780926 .. 1780972 -  -6.5  -4.60797   CTGGGACAGAGAAAA TCGAGTAGGGTGAGGCAAGGT AATTA AGCTTGCCTCATCCCTCTCAC AGAACCGTACGTACG  77 73
 GF1_RS07855 1779472 .. 1779494 -  -2.6  -4.02034   AAACAAAAAACAAGA           TGATCCGC GGAATTG GCGGACCC           CGTTGTGTTTTAATG  56 82
        msrA 1778155 .. 1778169 -  -5.7  -3.14026   GACAGCGATATCGAA               CCGAT CTGTC ATCGG               TTTGCCGCCAGCTTT  49 234
 GF1_RS07835 NONE
        cobO 1775908 .. 1775918 -  -3.2  -4.63218   GTCCTTTCAAGAAAA                 CGGT CGC ACCA                 CACGTCCAGTGTGAC  68 196
        ileS NONE
        lspA NONE
        fabD 1771519 .. 1771543 -  -5.7  -4.56775   ACCTTGCCGGAAAAA          CCGGCAG GTAGATGGTGA CTGCCGG          CCAATGGTTATCCGG  72 33
         ffh NONE
        rpsP NONE
 GF1_RS07800 NONE
        rimM NONE
        trmD NONE
 GF1_RS07785 1767453 .. 1767467 -  -2.7  -3.70149   TCCACACCATCCAAA               GCCGG TCTTG CCGGA               GTTTGAAGTTCTTTT  51 120
        rplS 1766795 .. 1766846 -   -12  -3.14963   GGCAGAACCACGCAA CCGGCCACCACCGGGCCGGCCAGCG GGC CGC-GGCCCGCCTCGTCGACGCCGG CAATGGTCGCAAATC  77 215
 GF1_RS07770 NONE
        pdxA NONE
         tmk NONE
 GF1_RS07755 NONE
 GF1_RS07750 1761358 .. 1761368 -  -4.6  -4.60797   CGCCGAGATAGAAAA                 GCCG CTC CAGC                 GCCGCTGAGCCGTTT  72 190
 GF1_RS07740 1757554 .. 1757569 -  -5.4  -3.99324   CTGTACCACCATAAA              CGGTTC CCCG AAACCG               TCAAGTCCTCTCCGT  63 26
 GF1_RS07735 1755920 .. 1755945 - -19.1  -5.79526   AGATCTGAAAAAAAA         TGGCAGGCTGC AAAC GCAGCCTGCCA          GGATACACTAAGAGC 100 109
        dacB NONE
 GF1_RS07725 NONE
 GF1_RS07720 1751409 .. 1751433 -  -4.1  -3.35597   CCGAGCCTGGAAAGA          CGGGGTGCGGA TGA TCCCAACCCTG          CGGGCAGGCGAACAA  49 211
 GF1_RS07710 NONE
 GF1_RS07705 NONE
 GF1_RS07700 NONE
 GF1_RS07695 1745410 .. 1745421 -  -4.4   -4.2558   GAGCGCCGACTAAAA                TTCG ATCT CGAA                 GCTGTAGACCCCCTC  64 8
 GF1_RS07680 1742689 .. 1742726 -  -3.2  -2.71144   GATCTTCTGGAACGA   CCTGGCCGACGGGG ACCGGGAATA CTGCGCCGGCCTGG    TGGCCTTCAACTCAA  41 287
        ltrA 1740100 .. 1740111 -    -3  -4.57569   CCATTCCGGCAAAAA                CAAA AAAC TTTG                 TGATTACCACTGAAA  65 316
 GF1_RS07640 1733681 .. 1733691 -  -2.4  -3.31263   AGGCGACCGGGACAA                 TGGG AAC CCCG                 GTCCGGCTGGAGATC  45 39
 GF1_RS07635 NONE
 GF1_RS07630 NONE
 GF1_RS07625 NONE
 GF1_RS07620 NONE
        cobU 1729650 .. 1729679 -  -9.2  -3.45231   TGACATATTCAAAGA       CCGCCGCGGAGG TTGCAG CTTCCACGACGG        ATTGTACGATGCATC  71 224
        cobT 1727024 .. 1727045 -  -2.1  -2.62983   GCGAGCGCGAGATCA           CTCGACCGG GGTG CCGGTGACG            CCGGCCTCTTCAAAG  38 1
        cobS NONE
 GF1_RS07595 NONE
 GF1_RS07590 NONE
        cbiB 1722583 .. 1722594 -  -4.4  -4.43815   AGGAATAGATGAAAA                CGTT TATC AACG                 GGCATATAATTTTTC  67 91
 GF1_RS07580 1720172 .. 1720196 -  -4.4  -3.83844   TTGACCAACCAACAA          TGCAATAATG GATAT CACTATTACA          ATAAAGGCATAAAGT  58 348
 GF1_RS07570 1717339 .. 1717350 -  -5.8  -3.97388   ATACTGGAGGACAAA                CAGG CCCG CCTG                 GCCCATCTTGCCGGG  64 238
 GF1_RS07560 NONE
        panC NONE
 GF1_RS07550 NONE
 GF1_RS07545 1712627 .. 1712649 -  -8.4  -4.66833   GGCCAAGGCCAAAAA           GGAGCTGCAA CTC CTCCAGCTCC           TGCTGGGCGATTCAC  86 259
         mdh 1710091 .. 1710104 -  -3.7  -2.78596   GAGTCCGGGATTACA               GTCCG GTTG CGGCC                ATCTGCCGGGAAACC  43 7
 GF1_RS07525 NONE
 GF1_RS07520 NONE
 GF1_RS07515 NONE
 GF1_RS07510 NONE
 GF1_RS07505 1702323 .. 1702338 -  -8.2  -2.62513   AGAAGGGCAATGAAG              CCCAGC AGGA GCCGGG               GCGGTACCGGTGAAA  59 183
 GF1_RS07500 NONE
 GF1_RS07495 1698753 .. 1698798 -  -6.1  -2.71712   GCTGGCCCGGGAAAT CGCCCGCGCCGT-TATCGCCTC CGA GAGGCCATAGACAGGACGAGCC CGGCGATCCAGGCAC  51 45
        rplU 1691261 .. 1691273 -  -3.3  -3.53444   GTATCTCCCTGTAAA                TCGGC TAT GCAGA                AATTTCCTCGATGGT  49 17
        rpmA 1690884 .. 1690915 - -21.8  -5.43414   ATCAGATACAAAAAA      GACTCGATACCAGG ATGG CCTGGTATCGAGTC       TTTGAAACTTCTTGC 100 94
        obgE NONE
        proB 1688424 .. 1688436 -  -9.1  -3.08679   CTCCTTCAGGCAACA                TCGCG TGG CGCGA                TATTGTCGCTTCTGT  66 3
 GF1_RS07430 1687088 .. 1687108 -  -4.5  -3.41602   CTGAGCCGAGCACAA            CCGCGACAC ACC GGGACACGG            CTCCTGGCCCCATGG  51 43
        nadD 1686263 .. 1686299 -  -7.1  -4.40804   GATCAGTTTACAAAA    TCCAGCCAGCGGACCGG AAA CCGGTCTGCCACCTGAT    CGGTGTCCCACGGTG  75 50
 GF1_RS07420 NONE
 GF1_RS07415 NONE
 GF1_RS07410 1679680 .. 1679693 -  -2.3  -4.58395   CTGATGTCGGAAAAA               GGGGT GCAT ACCCT                GCCGGTCATGGAGGG  66 132
 GF1_RS07395 1676622 .. 1676634 -  -6.2  -3.52788   GGAAAAAATAAGAGA                CCCG CCTGC CGGG                GGTGGGGGCGGAATC  58 39
 GF1_RS07375 1670881 .. 1670900 -    -5  -3.69323   TGATTACCACTGAAA            TTCAGCCA CCGA TGCCTGAA             GGTGTCGGCCTCATC  55 213
 GF1_RS07370 1669688 .. 1669698 -  -5.4  -3.90048   GCTTGTCGAAAAATA                 CCAT ATT ATGG                 GCAGGCACTGCCTGA  63 20
 GF1_RS07365 1669008 .. 1669031 - -13.2  -5.08824   TGCGGACGCAAAAAA          GGTGGAAAGG TCAC CCCTTCCACC           TTGTGTGGATACCCC 100 119
 GF1_RS07360 1667852 .. 1667902 - -23.5  -5.78622   CGACCCCAAAAAAAA GGCCGCCAGGCACGGGAAT TTTTTCTTTTCTC ATCCCCGTGCCTGGCGGCC TTTGGCGTTCATACG 100 58
 GF1_RS07345 NONE
 GF1_RS07340 1662485 .. 1662530 -  -3.2  -3.62275   ATGGAGCAGGGCAAA CGAGGGGCTGGACACATACTG TTCGC CAGG-CACTTCCAGCCCCTGG CTATGGCCTGGGTCA  51 174
        tsaE 1662170 .. 1662181 -  -2.2  -2.64144   GGGCCACGTAAACAT                CCAT GCTC ACGG                 GAGTCCCTCCTGTTC  38 20
 GF1_RS07330 1660752 .. 1660778 -  -4.5  -3.76004   AGTTAATGAAAAAAG        GCTGGGATG-CAG GTC CCGACATCCCA-C        ATTGTGGTTTATTTG  58 197
 GF1_RS07325 1658912 .. 1658937 - -16.9  -5.37593   GGGCAAACTAAAAAA         GACCCGGCCAC CAAA GTGACCGGGTC          TTTTATCTTCTTTCT 100 53
        ltrA 1656818 .. 1656862 -   -10  -2.79919   AGAAAATTGGCAAAT CGAGTAGGGTGAGGCAAGGT AATTA AGCTTGCCTCATCCCTCTCA CAGAACCGTACGTAC  67 73
 GF1_RS07300 NONE
 GF1_RS07295 1653596 .. 1653609 -  -2.3  -5.41746   AAGTGTCGAAAAAAA               GGGTG TTGT CAGCC                TAGTCTCAAGGGCAG  82 53
 GF1_RS07275 NONE
 GF1_RS07270 1646800 .. 1646816 -  -2.2  -2.54896   GGCTCAGGTAAGCGA              CCGAAG GGAGA CTCCGA              ATGCTCATGTACTTC  38 110
 GF1_RS07265 1645931 .. 1645946 -  -4.6  -3.16203   CGACCAGAATAGATA              GCTGGT CCCG ACCCGC               CTGCGTTCAGCCAGA  49 69
 GF1_RS07200 1627708 .. 1627728 -  -4.7  -3.43338   ATCCAGATCAACTAA            CTGTTCCTG CAG CAGGAAGAA            GAGATCGCCTGCTGG  53 1
        serC NONE
 GF1_RS07190 1625538 .. 1625554 -  -3.7  -3.36492   CCTCCAAGGGGACAA              CAGCT CGATGAC AGCTG              AGCTTTGTAGGTAAT  49 71
        rlmN 1624106 .. 1624125 -  -6.4  -4.30576   GTTTCAGTACGAAAA            CAACC-GGG TGA CCCTGGCTG            ACGAGGCCAGGGGAG  72 203
 GF1_RS07145 1616804 .. 1616829 - -14.7   -4.2349   TTCCGACACGGAAAA         CCGGCGACAGC AGAG ACTGCCGCCGG          CTGCGAGCATGGGTT 100 39
 GF1_RS07140 1614418 .. 1614443 - -20.5   -4.1711   AGGATTGGGAACAAA         CCGCCGGGATC CGGA GATCCCGGCGG          AAGCATGATCATATC 100 39
 GF1_RS07135 1613500 .. 1613528 - -10.3  -2.71681   TAACTCCGGGAACCA       CCGCCCGGCTGG AGACCA CCAACCGG-CGG        CCGGTCCTGGAAGAA  63 325
        ltrA NONE
 GF1_RS07105 1607075 .. 1607086 -  -3.6  -3.12668   GATGGCCACAGTCAA                GCCC CTAG GGAC                 GGGTTTATGGCGTCC  46 215
 GF1_RS07100 1605078 .. 1605121 -  -7.8  -2.72511   CGGATTCCTGGAAAC CCTGCTGCCGGGCATGGCCC TGCT GGGCATCACCCTGCTGCTGG CCATCCTAACCAACT  54 135
 GF1_RS07090 1603085 .. 1603118 - -15.3  -3.12895   GGGCTGATTAAGAGA     GGCAGGGTGGCAGCA ATAA TGCTGACACCCTGCA      TTAACTTTTAGATTT  95 40
 GF1_RS07025 1583988 .. 1584010 - -10.6  -3.05384   GCTCGGGGTATTCAA           CGGTGATATC GGT GTTATCACCG           GCATAGACAATGAAA  66 341
 GF1_RS07010 1578869 .. 1578886 -    -4  -3.89346   TCGGGATTGCAGAAA             GCCGGC TGTATG GACGGC              AGAGACAGAGCGTGG  58 214
 GF1_RS07005 1575829 .. 1575850 -  -7.9  -4.10657   GGAGATTTTTGAAAA           TCTGGCCCG GGCC CGGACCAGG            TATTTCAGCGCCGGC  74 394
 GF1_RS06970 1571691 .. 1571718 -    -7  -3.30124   GGCCATTTCCCAGAA        GATCATGGCCGAC CAC GGCGGC-ACGATC        CAGATACGCTCAGTT  56 97
        hrpA 1561213 .. 1561229 -  -8.1  -3.36273   TTGCGTTAACAGTAA              CAGTTAA CAG TTAACTG              TTATCCTGCCGGGCC  62 429
 GF1_RS06940 NONE
 GF1_RS06935 1559620 .. 1559659 - -10.6  -5.64274   GTACCGATAAAAAAA  CGGGCCGGACTGTTCAAC AGCA GAGAAACAGCCAGGCCCG   TCGGGATTTACGGAT 100 55
 GF1_RS06915 1555346 .. 1555360 -  -5.6   -4.0616   GAGCTCAAGGATAAA               CTGGGC CGG GCCGAG               GTTATCGACTGCTCG  64 302
        lepA 1549225 .. 1549270 -  -2.3  -4.07687   ACTTTTTCCGTAAAA GCGGTGGTTTGACCGGCTGTC CGGT GACGGCCGGATAAACCGGCAG ACGTACCCGGAGATC  56 114
 GF1_RS06865 1545695 .. 1545715 -    -9  -3.04461   GATTCACGCCGAACA            GTCCTGCA GAGGT CGCAGGAC            TATCATAGTTAGTAT  66 207
 GF1_RS06860 NONE
 GF1_RS06855 NONE
 GF1_RS06850 NONE
 GF1_RS06845 1538117 .. 1538136 -  -3.4  -3.29511   TTCAGGGTTGTAGAA            CAGCAGCG CTTA CGCGACCG             GTTCGCTCCCGGAAG  47 60
 GF1_RS06840 NONE
 GF1_RS06835 NONE
 GF1_RS06830 NONE
 GF1_RS06825 NONE
 GF1_RS06820 1534717 .. 1534755 -  -5.5  -3.02461   TAATGTTGGTGAACA  TCTCAGTTAACACTGATG CATG CAT-AGTGTCAACAGAAA   ACTCACCGGCTCAAG  50 65
        rpsF NONE
        rpsR NONE
 GF1_RS06805 1532928 .. 1532947 -   -10  -4.62336   ACGGCATCTGAAAAA            CAACCGGC ATCC ACCGGTTG             TTTCGTCTTGTCAGG  95 36
        rplI 1532132 .. 1532178 - -14.6  -3.87994   ATCCACTGTCAGAAA CGACGAATGGTTTTTCCTGC ATAGTGA GCGGGAAAAACCATTCGCCT GGCAAGCAACTGATT 100 81
        dnaB 1530616 .. 1530631 -  -5.4  -2.55351   GTTGTTTACATGAAT              CCGTGCA GCT TGC-CGG              GTTGCCGCCCCGGCC  47 58
        leuS NONE
 GF1_RS06785 1527413 .. 1527443 - -18.4  -6.28967   CAGAAAGAAAAAAAA       GACGCGACAGCC GCTATCT GGCTGTCGCGTC       TTTTTTTATGTCCTC 100 79
        dusB NONE
        arfB 1523643 .. 1523653 -  -3.2  -4.15565   GTCACCATTCCAAAA                 CGAT TCT ACCG                 GGTGCAGACCTGGAA  60 119
 GF1_RS06755 NONE
 GF1_RS06750 NONE
 GF1_RS06745 1517371 .. 1517420 -  -6.6  -4.08557   CCTTGTAAACAAGAA GACAGAGG--TGGAAAGGAGCGCTT TTC ATG-GCTCCATCCCAGGCCTCTGTC TGAAGGGTTCTGCGA  70 100
 GF1_RS06735 1515994 .. 1516006 -  -4.7  -2.66964   TCAGCCAGTATAGTA                CACGG TCA CCGGG                GTTTTGGCATTATCT  45 119
 GF1_RS06730 1514639 .. 1514649 -  -4.6  -3.57462   CATGCCATCTCCAAA                 CACC CCG GGCG                 GCCCAACGCAACGCT  55 364
        ltrA 1512724 .. 1512744 -  -5.3  -3.02144   TTACCGGTCGGAACA            GGTTGCAGG CTG CCTGGATCC            TGGATGGAAAATTGT  50 334
        dnaE 1508944 .. 1508960 -  -3.7  -3.85698   TTTTTCCGGCAGAAA              CTGGT TTCAGTT ACCAG              CTGATCAGGGTGGAA  56 150
 GF1_RS06715 NONE
 GF1_RS06710 NONE
 GF1_RS06705 1505628 .. 1505643 -  -4.7  -3.99985   GACATATTGAAAGAA              CCCAT TATCTG ATGGG               CAAATAACTTTTTGG  60 399
 GF1_RS06690 1500989 .. 1501003 -  -2.2  -4.23218   AATTATCAAAAAATA               CAAATT AGT AATTTA               ATATCAACTGGTTCT  58 484
 GF1_RS06685 1499913 .. 1499929 -  -6.5  -3.28712   TGTTGCCGCTGATAA              CAGCAGC GTT GATGCTG              TTGCTTGGTATTACC  54 326
 GF1_RS06675 NONE
 GF1_RS06670 1498148 .. 1498161 -  -8.1  -3.31461   CAGGGAGTCCGAGAA               CCGGT TACG ACCGG                TAAAGTGGCTCGATT  62 176
        istA NONE
        istB 1495669 .. 1495680 -  -4.4  -3.11687   TTAATGATCACCTAA                TGGA GCCA TCCA                 TGATCGGGTTAATGA  48 80
 GF1_RS06655 1495088 .. 1495103 -  -4.6   -3.2534   ATTACTACAACCGAA              GCTGAG TTAT CTCCGC               CCGCAGCAATAGGAG  49 242
 GF1_RS06650 1493538 .. 1493574 - -15.9  -3.32963   AGGTCCATGTTACAA    CTCGCCAGCCACCAGTT TTC AGCTGGTGGTTGGCAAG    GTTACGAAGCGCATA 100 238
 GF1_RS06645 1492647 .. 1492662 -  -6.1  -2.68142   TATAGCAATAATGCA              CCGGT ACCTGA ACCGG               CAACAATGCTGCTCT  48 250
 GF1_RS06615 1487708 .. 1487723 -    -4  -2.98545   CGTTCATAATAAGCA              TAATCC TGCC GGATCA               GAGCTGGTTCGGTCC  46 56
         dxs 1485763 .. 1485795 - -10.5  -3.05596   CATGTGGGGATTTAA      GGTGTTTCCGGAGAG TTA CTTTCCGGGAGCACC      TATTTTTTTGTCTGC  72 25
 GF1_RS06600 NONE
        tnpB 1484486 .. 1484496 -  -3.2  -3.64812   TTTTATGTAAAAAAC                 GTGC TTT ACAC                 CACCGATTCATAGCG  51 20
 GF1_RS06590 1482401 .. 1482425 -  -3.4  -4.15106   GAGCAACCTGTAAAA          GACAGCCCCG TAGAG CGACGCTGGC          TGTTTTTCATTGACC  60 464
 GF1_RS06580 1480744 .. 1480777 - -12.4  -2.90496   TTTCGGCTGAAAGCA     GGGTGCCTGTGGGG AAATGA CCCCATAGGCACCT      TATTTTTTTCTGCTG  78 249
 GF1_RS06555 NONE
 GF1_RS06550 NONE
        gltX NONE
 GF1_RS06465 1455692 .. 1455715 -   -16   -4.1399   TCAGTTACACATAAA          CAGGCCGGAC TGCT GCCCGGCCTG           AGTGTGATTCCTTTC 100 290
 GF1_RS06455 1454439 .. 1454452 -  -8.1  -3.96624   GAGGGGCAGGAGAAA               CCAGG GGGC CCTGG                TTGTTTCGCCGGGGT  71 122
 GF1_RS06440 NONE
 GF1_RS06435 NONE
 GF1_RS06430 1449448 .. 1449463 -  -2.6   -4.6526   ATAAACCTGGAAAAA              TTTGAA CGAC TCCAAA               AAAAACACGGCCTGC  66 110
 GF1_RS06425 1448518 .. 1448551 -  -7.4  -3.13867   CCATGCAGGAAGAGA     TCGATTCCCTGCAG GCAGCG CTGCAGGAGAGCGA      AAGCCAGAAAGACGA  54 480
 GF1_RS06385 1439347 .. 1439388 - -18.2  -5.27335   TGGGTGAAAGAAAAA GCCGCCGGTCCGGGGTGATCA TTG TGATC-CCC-GG-CCGGCGGC TTTTTTTTCGCACGG 100 89
        purM 1435069 .. 1435097 -   -16  -5.88476   AAAAGAAAGAAAAAA        GCCCTGGTCCGG AGTAA CCGGATCAGGGC        TTTTTTCGTGTCGCT 100 79
        murJ 1430254 .. 1430280 -  -5.9  -3.72576   CTTGCCGGCAGGAAA        CTG-CTGGCC GATCCCGG GGCCAGGCAG         TCTCTGCCCGAGGTG  58 277
        glgB NONE
 GF1_RS06330 1424092 .. 1424117 - -17.6  -6.34616   GGAAAATAAAAAAAA         CCGGGGACCG CAGAAC CGGTCCCCGG          TAATCGGGATGTTTT 100 55
 GF1_RS06325 NONE
 GF1_RS06320 1421230 .. 1421247 -  -6.2  -3.48593   CAGGCTGGGATAGAA             CACGCC TCCCGT GGCGCG              TTTCCTCAGGCCGTG  58 31
 GF1_RS06305 NONE
        ftsE NONE
 GF1_RS06295 NONE
 GF1_RS06290 1414711 .. 1414727 -  -2.2  -4.18494   TACCCGGATGGAAAA              GGAATG TGGGT CACCCC              GTACCTTGGTACTTT  58 203
 GF1_RS06285 1413297 .. 1413331 - -24.5  -3.98804   GTAAAGGTCAAAGAA     GAAGGCCCTGCCATC TCTGG GATGGCAGGGCCTTC     TGTGTTGGTCAGAGA 100 58
 GF1_RS06275 NONE
 GF1_RS06270 NONE
 GF1_RS06265 NONE
 GF1_RS06260 1406742 .. 1406762 -  -6.1  -3.23452   AGCTGGACAATCGAA            CTGGATACT TGC AGCGTCCAG            CCGCGCCAATACCTG  54 435
 GF1_RS06255 NONE
 GF1_RS06250 1405526 .. 1405538 -  -6.2  -3.30124   CGGCATCGGCCACAA                GGCC GTCGA GGCC                GGCTACAAGGTCCTC  54 355
 GF1_RS06235 1402431 .. 1402447 -  -6.5  -5.13473   AGGACAGGGAAAAAA              CAGCTCA TAA CGAGCCG              TTGAAAAACGTAGCG  86 207
 GF1_RS06230 NONE
 GF1_RS06225 1400104 .. 1400127 -  -3.7  -4.09685   CCGGATGCGGTAAAA          CCGCACGTC CGGTTC GACGAGGGG           GCGCTGTCCGCAATG  60 111
        istA NONE
        istB 1395323 .. 1395346 -  -7.5  -4.19746   TGGACGGTAAAAGAA          GGTATCCCCA CAGCC TGGGGAT-CC          TCTGGGGCAGGGCCC  71 133
 GF1_RS06185 1391428 .. 1391442 -  -4.2  -3.93288   GTTGAGGGAATGAAA               CCAGTT CCC ACCTGG               CTCCTGGTAGCGATT  58 124
        istA NONE
        istB 1385119 .. 1385137 -  -5.8  -2.56596   CTGGCCAGTAATGGA             GGGAGCCC TAC GGGCGACC             GGAATTACTGGCCAG  50 69
 GF1_RS06115 1374831 .. 1374858 -  -3.4  -4.60713   CAAAACAGGACAAAA        GGCCTGAAAACA CCAT TGCTATCAAACC         TGTCAGGCATTCTGC  68 128
 GF1_RS06105 1372301 .. 1372319 -  -7.4  -2.52464   GGCTGTTTCAATGTA             CGGCAC ATGCGCG GTGCCG             GCCAGTGGTCTACCC  50 202
 GF1_RS06070 1364294 .. 1364315 -  -6.5  -2.52516   CGCCCGAGCACGAAC           GGGCCATCC TCTG GAACGACCC            CGACCTGGCCATCGC  48 266
 GF1_RS06025 NONE
 GF1_RS06020 1355924 .. 1355934 -  -3.2  -3.02144   TTACGTTTTTCAACA                 GCCT GTC AAGC                 CATGGATCTGATGAT  43 49
 GF1_RS06015 1354210 .. 1354226 -  -3.6  -2.71712   GGGCCGTGCCGAAAC              CCGGAG TCTCC CTTCGG              TCGCTTACCCGGAGT  43 285
        hemB 1353014 .. 1353037 - -18.2  -5.66684   CAAGTGACAAAAAAA          GCCCGGTCGA GCAA TCGACCGGGC           TTTTTTTCTTTTTCT 100 52
 GF1_RS05990 1348765 .. 1348781 -  -7.9   -5.1971   ATTAAAAATGAAAAA              CCGGCCT GTC ACGCCGG              AGGTCGCGAGTTCGA 100 491
 GF1_RS05970 1346409 .. 1346451 - -16.3  -2.63301   GAGATCCCCACAGGA TGAGGAACCGGGC-CTCGGC CGGC GCCGAATGCCCGGAACCTCA ACCTGTGGGAGCCTG 100 61
 GF1_RS05965 1346222 .. 1346252 -  -7.7  -4.81163   GAAAGATTAATAAAA      GACTGATCAATGCA TAAA TGCCTTGATCAG-C       ACGCCAAGACCGACA  90 1
 GF1_RS05960 1346022 .. 1346039 - -11.3  -4.12296   TCCATAAGCAAAGAA             GGGGAAG TTAC CTTCCCC              AGAGGCCGAGATTAA  91 37
 GF1_RS05955 1345397 .. 1345413 -  -5.8  -4.26832   CAACAACAAAGGAAA              TGGCAC AGAGA GCGCCA              AGGCAAAAGGATACG  70 228
 GF1_RS05950 NONE
 GF1_RS05945 NONE
 GF1_RS05940 NONE
 GF1_RS05935 NONE
 GF1_RS05930 1340756 .. 1340768 -  -5.5  -3.21099   TGTGCCGAGCACGAA                CGGTA ATT CACCG                CTGAATTCCTCACAG  52 144
 GF1_RS05925 1339177 .. 1339195 -  -4.6  -3.38291   CCGAGAAGTTTATAA             TTTCGATA GAC TGTCGAAA             TATCGCATCGAAGAT  51 95
 GF1_RS05920 1337797 .. 1337816 -  -3.6  -3.24747   CTTCCACACCATCAA            TATTGGTA CAGA TACCAGTA             CCGCCGCAACACAAA  47 310
 GF1_RS05880 1329843 .. 1329854 -  -5.8  -3.14132   GTTTTTTTCGAGCAA                CTGC TCGA GCAG                 CGGCTGTACCTTGCC  54 50
 GF1_RS05870 NONE
 GF1_RS05865 1327048 .. 1327063 -  -4.6  -3.10082   AAAAATCTGATGGAA              TCGGGC ATCC GCCAGA               AATATGACGTGATCG  47 146
 GF1_RS05855 1325815 .. 1325839 - -12.9  -5.83226   AATGGAACAAAAAAA          CCCGCAAACTC TTG AAGTCTGCGGG          TTTATCGGAGCTTAA 100 63
 GF1_RS05850 NONE
 GF1_RS05845 1323605 .. 1323635 - -15.6  -6.23545   TTCAAACAAAAAAAA       GGCGCAGTTTCA GTATTCA TGAAACTGCGCC       TTGTAAAGACTACTT 100 121
 GF1_RS05840 NONE
 GF1_RS05835 NONE
 GF1_RS05830 1322427 .. 1322440 -  -2.3  -3.11634   GGTTATATCAGGCAA               GTCCA TCAT TGGCC                TCCCTCTTCCCGATG  42 4
 GF1_RS05825 1321186 .. 1321197 -  -2.2  -2.71483   ATAGCCTGTCAAGGA                GTAC TGAA GCAC                 CTCGGGGCCTTGCTG  39 7
 GF1_RS05820 1319800 .. 1319815 -  -6.2  -3.38656   TTATTATATATAATA              TAAGCA AACA TGCTTA               CCCCCTTGTTTTTAC  56 103
 GF1_RS05815 1318608 .. 1318625 -  -5.6   -4.7497   TTTAGGTAGTAAAAA             TGCAAC TTTTGT GTTGCA              TGGGTGTTTTGTGTG  78 97
 GF1_RS05810 NONE
 GF1_RS05805 NONE
 GF1_RS05800 1316024 .. 1316047 -  -5.2  -2.57931   TCTACTGTTGATAAT          CTGGTTGCCT CGGC AGGCAACTCG           CAGGCAACTTTTTTG  47 279
 GF1_RS05795 1314745 .. 1314757 -  -3.4  -4.84017   AAGCCTGGAGAAAAA                GGAA GGGAA TTCC                AGGTCATCCAGTGAC  71 196
 GF1_RS05785 NONE
 GF1_RS05780 NONE
 GF1_RS05775 NONE
 GF1_RS05770 1309561 .. 1309600 -    -6  -4.25104   CCGGGTTGACCAAAA  GTTTCCTGGTTTCCT GTACTATAGGG AGGAAAC-AGGAAAC  TTTTGTCCATTTTTG  70 93
 GF1_RS05765 1308922 .. 1308947 -  -5.4  -4.83169   AGGGGTTGATAAAAA         GGTATCCATC TCTGTG GCCGGATACC          TGACAGCCTTAATCG  78 34
 GF1_RS05760 NONE
 GF1_RS05755 1308177 .. 1308197 - -12.7  -3.25079   TAACAGCTGATAACA            GGATATGGA AAA TCCATATCC            GTGTCCAGGAAAAAG  81 48
 GF1_RS05750 NONE
 GF1_RS05745 1306384 .. 1306396 -  -6.3   -2.5655   TCCAGTCAGATCAAT                TCCTA TTA TAGGA                GCTGGAACAGATAAT  50 118
 GF1_RS05740 NONE
        rsmI 1303733 .. 1303759 -  -2.2   -4.1899   CCATTGTACTGAAAA         GAAATCTTCCTG ATA CTGAAAGTTTCC         TTTTTCAGCAAGTAC  58 238
 GF1_RS05730 NONE
 GF1_RS05725 1300378 .. 1300395 - -10.5  -2.62735   ATACTCTGGACATCA             CCCCGGC GACC ACCGGGG              CCCGGATCATGGTGA  62 412
         zwf NONE
         pgl NONE
         edd NONE
 GF1_RS05695 NONE
 GF1_RS05690 1290389 .. 1290428 - -13.6  -4.03413   AGTCCCTGACATAAA  CCATCCCCGGCCACCA GGTTCAGG CAGCGGCCGGGGATGA   GGAGGAGAAGGAGTG 100 297
 GF1_RS05685 NONE
 GF1_RS05680 NONE
 GF1_RS05675 NONE
 GF1_RS05670 NONE
        ccmA NONE
 GF1_RS05660 NONE
        ccsA NONE
 GF1_RS05650 NONE
 GF1_RS05645 1283886 .. 1283924 - -14.8  -5.93252   TTGAAAAAGAAAAAA  CAAAACAGGGCCATCCC GTCAGG AGGATGGCCCTGTTT-G   CATTCACTGAGCTGG 100 251
 GF1_RS05635 NONE
 GF1_RS05630 1280279 .. 1280294 -  -6.2  -3.28712   CTTTGCCCGGGAGAA              GAAAAC ACCG GTTTTC               CGCCCGACGGCAGCG  56 72
 GF1_RS05625 1279312 .. 1279327 -  -3.2  -2.62184   GGGGGCTGGATATCA              TCGAGC AGAT GCTGGA               TGAACTACCGCCCGT  40 44
 GF1_RS05615 NONE
 GF1_RS05610 1274932 .. 1274952 -  -6.8  -3.40403   GCTGGTGGATGAGAA            GGGCCC TGCCGCCGT GGGCCC            CTTTATCCGCGACCT  59 99
 GF1_RS05585 NONE
 GF1_RS05580 NONE
 GF1_RS05575 1266318 .. 1266340 -  -4.1  -3.55203   AAAATTCGGCTCAAA           GTGCTCATG TACTC CATGTACAC           TGCGCTTTTCGCCTC  51 87
 GF1_RS05565 1263279 .. 1263312 -   -16  -4.45168   GGCTGAAAAGAGAAA     GCCTGTCCAGCCAG GGCATT CAGGCCGGACAGGC      TTGTGTCAGCAAGAG 100 58
 GF1_RS05535 NONE
 GF1_RS05530 NONE
 GF1_RS05525 NONE
 GF1_RS05520 1252599 .. 1252609 -  -4.6  -3.66784   TGATCCGGAAGATAA                 GCCG GAT CGAC                 CGGTACACACCCATG  56 163
 GF1_RS05505 1250016 .. 1250047 -   -13  -3.31144   CTGGCAGGCCGATAA      CAGGCCACCTGATA TGCA TGTCGGGTGGCCTG       TTTTTTTTACATAAT  89 55
 GF1_RS05480 NONE
 GF1_RS05475 1243692 .. 1243702 -  -6.8  -3.56092   TGATTATCCTGGAAA                 GCTG GTG CAGC                 TCCGGACGGACCACT  60 105
 GF1_RS05440 1234815 .. 1234829 -  -2.1  -3.93769   ACCGGAAAAAATCAA              GGCTGC ACTG GCA-CC               TTTTGACTTTCTTGT  53 472
 GF1_RS05425 1231215 .. 1231225 -  -5.4  -3.18031   TCTTTAAAAAGTATA                 CCTT TTT AAGG                 TGCCATTCGGAACAC  52 58
 GF1_RS05380 1219811 .. 1219823 -  -3.4  -3.50853   TTTCTTTAAGTATAA                CAGA CCGCC TCTG                AACTTCAAGGGATTG  49 54
 GF1_RS05375 NONE
        rarD 1216642 .. 1216654 -  -6.2  -3.07994   GCCAATGGCAGCGAA                CCGG AGAAA CCGG                GCAGCGGTCTGCTTG  52 487
 GF1_RS05325 NONE
 GF1_RS05320 1204794 .. 1204804 -  -6.8  -4.07568   TCTCGTGGCCGAAAA                 GCTC GTT GAGC                 ATCAGCTCTTCGGTG  70 369
 GF1_RS05310 1203830 .. 1203859 - -13.6  -5.05712   ACAAAGAATGAAAAA       GGTGCTGCAGTC CAAAGC GACGGCAGCACC        TTTTTTGGTTTCAAG 100 185
 GF1_RS05285 NONE
 GF1_RS05280 1197601 .. 1197622 -  -4.3  -2.97764   TACATAAAAAACTCA           TCTGGCCCT GATC AGGGCCGTA            CCCTTCCCAACCCGG  47 91
 GF1_RS05240 1189860 .. 1189889 - -12.9  -2.91383   ACCGGGAGGTAGACA       GGAGAGCGGGCG AACCAGG CGCCCGC-CTCC       TGTGGAGCAACAACG  82 176
 GF1_RS05235 1187986 .. 1187998 -  -3.3  -3.77196   GCAGTATGCATGAAA                CGGGT CAA ACGCG                TGGCTCGCAGAGCGT  53 108
 GF1_RS05230 1185880 .. 1185904 - -20.1  -5.73978   ATCACAAACAAAAAA          GGCGTGGACAC CGG GTGTCCACGCC          TGAAAAGTCTCAGCA 100 53
 GF1_RS05215 1183188 .. 1183210 -  -2.6    -5.055   TCAACGGTGAAAAAA           GGAAAATCCG TGC CAGTTTCCCC           TCTGTTGCAGGGGTG  74 94
 GF1_RS05195 NONE
 GF1_RS05190 1179002 .. 1179012 -  -5.4  -2.72471   GTCCCAGCAGATAAG                 CGAA GAC TTCG                 AAATGAAAAATGCTC  48 194
 GF1_RS05185 1177151 .. 1177170 -  -3.7  -4.20783   ATTGTATGGAAGAAA            TTTTTCT GATTCA AGAAAAA             GGTAATATTTTTTCA  62 439
 GF1_RS05175 NONE
         eno NONE
 GF1_RS05165 1174017 .. 1174042 - -20.5  -4.77173   GGCCGACAAAAGAAA         GGCGGGCACCA TGAC TGGTGCCCGCC          CTGTATTCAGGAACC 100 50
 GF1_RS05160 1172637 .. 1172652 -  -8.2  -3.09516   TCGGCGACCAGGGAA              CCCCGC TCCT GCAGGG               CTACAGTTTTCCCGC  62 386
 GF1_RS04900 NONE
 GF1_RS04895 1117606 .. 1117640 -  -4.1   -2.6927   ATCCTGGATAGATGA     CCCCGTGACCCGG ATAGTGCGG CCGGGACACGGTT     CTCGTAGAAGTGAGA  43 42
        tviB 1116191 .. 1116218 -  -7.7  -3.08679   CGGGCCCAGGGAAGA        GCGGGCCT-GCA CGGGT TGCGAGGCCCGG        TTCCACGATCCAGAC  59 103
 GF1_RS04850 1106964 .. 1106979 -  -5.4  -2.73483   AGGGGATGGGAATCA              CGACCGG ATT CCGGT-G              TGATGGAAAAGAAAA  48 290
 GF1_RS04845 1106496 .. 1106515 -  -3.4   -2.6927   ACTCTTGATAGAGTA            CTCTGGTC TCCT GACCGGGG             ATCCAAATTGACTGA  41 147
 GF1_RS04840 1105152 .. 1105176 -  -5.7  -5.03715   ACCATTTTTAAAAAA          CCGTGTTTC CGTTGGT GAAACCCGG          CATGTGCAACCCGAT  83 87
 GF1_RS04835 1104852 .. 1104868 - -11.5  -6.22802   CCGGACAAAAAAAAA              CCCCGCC AAA AGCGGGG              GTTTTCTTACTGCCT 100 58
 GF1_RS04820 1101501 .. 1101527 -  -6.5  -5.35459   ACAGAGCACAAAAAA         GCCCCGCATCC GTTCA GGACACAAGGC         TCAATTCAGCTTGAA  95 60
 GF1_RS04815 1100000 .. 1100015 - -10.4  -4.47707   GTCTATCAAAAACAA              GCAGCC GCTC GGCTGC               GCGGTTTTTGTGTGT  93 227
 GF1_RS04810 1099590 .. 1099618 - -10.4  -2.73721   ATGAAGGGGTAATCA       TTGTGCC-CCGTC CTAT GACAGAGGCACAA        TGGGAATTGCAAAAT  67 52
 GF1_RS04790 NONE
 GF1_RS04785 1094849 .. 1094862 -  -3.7  -3.30441   CATCACTCCGTACAA               CCCGC ATGT GCGCG                GTTTTCTGCTCGATA  47 323
 GF1_RS04715 NONE
 GF1_RS04705 1078654 .. 1078685 -   -21  -5.98781   CATAATGAAAAAAAA      GCCACTCCGAAGCC CCTG GACTTCGGAGTGGC       TTTTTTTTATGTGAT 100 371
        ftsH 1073601 .. 1073620 -  -4.3  -2.86164   GGCCGAAGGATGACA            TG-CCAGG CAGGT CCTGGTCA            CCTCGCGGCCACTGT  47 155
 GF1_RS04685 1072024 .. 1072040 -  -9.3  -3.40403   GCGGCTGGAGTACAA              GGCGCGC AGG GCCCGCC              GAGGCCTGTGGAAGG  67 378
 GF1_RS04675 NONE
 GF1_RS04670 1069730 .. 1069743 -  -3.1  -4.10657   GGATATTCGGGAAAA               GATCG AGGC CAATC                TCGGCCAGAAGGCCG  58 109
 GF1_RS04640 NONE
        flgB NONE
        flgC NONE
        fliE 1059984 .. 1060006 - -13.4  -3.48276   CCTGTGGTGAGATAA           CCGGTCTCCC GGC GGGAGAGCGG           TTACCTGGGGCCCGG  90 78
        fliF NONE
        fliG NONE
 GF1_RS04610 NONE
 GF1_RS04605 NONE
        fliJ NONE
 GF1_RS04595 NONE
 GF1_RS04590 NONE
 GF1_RS04585 NONE
 GF1_RS04580 1051816 .. 1051831 -  -4.6  -5.66926   TGAAAAAAAACAAAA              CAGGCA TCCT TGCCAG               GTACTGTCCTTGTCC 100 57
 GF1_RS04575 1050423 .. 1050451 - -14.6  -5.26875   GCGGCAACGAAAAAA        GCCATCCAGCGC TTTTG GCTCTGGATGGC        TTTCGGGTCATTTTT 100 54
 GF1_RS04570 NONE
 GF1_RS04565 NONE
 GF1_RS04560 NONE
 GF1_RS04555 NONE
        fliN NONE
 GF1_RS04545 NONE
        fliP 1045429 .. 1045440 -  -5.8  -4.96501   CTGGAGAAAAAGAAA                CAGG AGCT CCTG                 GACAAGGCAACCGAG  83 109
 GF1_RS04530 NONE
 GF1_RS04525 NONE
 GF1_RS04520 NONE
        fliQ NONE
        fliR 1039150 .. 1039168 -   -11  -4.47485   AAAAACTGGAGAAAA             CAGCGGAA CCT TTCCGCCG             GCATCGACATCATCT  95 181
        flhB NONE
        flhA NONE
        flhF NONE
 GF1_RS04490 NONE
 GF1_RS04485 NONE
 GF1_RS04480 NONE
        flgF NONE
        flgG NONE
        flgA NONE
 GF1_RS04460 1029249 .. 1029266 -  -5.5  -4.56597   GTCTGCCCGGAAAAA             GGCCC GCTTAAAA GGGCC              AGACGTTGTCCACGA  72 15
 GF1_RS04455 1028097 .. 1028110 -  -3.8  -3.46602   GCCCTTAGAGGATAA               CCAG TTCGCC CTGG                AGGGCGCCGGCGGCC  51 1
 GF1_RS04450 1027521 .. 1027540 -  -2.1  -3.54346   ATATGTAAATAAAAT            CAGGC TGTTTTCTGT GCCTG             GTCTACCCAGGTGCC  47 239
        flgM NONE
 GF1_RS04440 1026572 .. 1026586 -    -7  -2.61873   ATCATTGTGAAATAT               GCGGGC TAG GGCCGC               TTTGATCTGCAGCGG  52 285
        flgK NONE
        flgL 1023837 .. 1023861 -  -4.1  -4.47328   AATTGTACCAGAAAA          TCAGAAGCCGG AAA CCGGAATCAGA          CCCTCGCCGGCCGGG  67 84
        csrA NONE
 GF1_RS04420 NONE
 GF1_RS04415 NONE
 GF1_RS04410 NONE
 GF1_RS04405 NONE
 GF1_RS04400 NONE
 GF1_RS04395 NONE
 GF1_RS04390 NONE
 GF1_RS04385 1014639 .. 1014650 -    -3  -3.55444   GGTTTATCCTTGAAA                GAAT TCGA ATTC                 CTTTCTGAATGTCTC  49 2
 GF1_RS04380 NONE
 GF1_RS04375 NONE
 GF1_RS04370 1010544 .. 1010557 -  -2.3  -3.32997   TGGTGAGAAAGGGAA               CTTGC GCAG GCATG                GCAGGAGGGCCTCAG  45 52
 GF1_RS04365 1009381 .. 1009415 -    -5  -3.32963   ACGCCGAGGCCATAA     CCCTGCCTCTGT TCCCAACCTTG ACAGAGGCGGAG     CAGAATGAGATTGTG  51 111
 GF1_RS04350 1005280 .. 1005306 -  -4.5  -3.28924   CACTTTTTTGGAGAA         TCCTCGTTTTC AGAAA GAAAATGAAGA         ATATTTACCCTTGCT  51 225
 GF1_RS04340 NONE
 GF1_RS04335 NONE
        fliD NONE
        fliS NONE
 GF1_RS04320 1000731 .. 1000747 -  -3.6  -3.37761   CTGGAAGAAATTTAA              CCAGGT TGTCG ACCGGG              CGGTTCTGGATGCGG  49 237
 GF1_RS04310 NONE
 GF1_RS04305 NONE
 GF1_RS04300 NONE
 GF1_RS04295 NONE
 GF1_RS04290  994745 ..  994760 -  -4.6  -3.60884   CTGAAAAGAGGATAA              GGCTTC GGAC GCAGCC               TGGTTACTCGTTACG  55 29
 GF1_RS04285  993942 ..  993954 -  -3.3  -3.02144   CTACGTTTTTCAACA                GCCTG TTA CAGGT                GCAACTGCCAGGACT  43 161
 GF1_RS04280  991135 ..  991162 -  -6.2  -2.98823   GCTCTGGTATATACA        CTGGTC-TGCCTC TTC GTGGCAAGGCCAG        AGACGGCAGGTGTCC  53 46
 GF1_RS04275 NONE
 GF1_RS04270 NONE
 GF1_RS04265  987435 ..  987473 -  -8.8  -2.58959   GGATACGAAAGAGAG  TGCAGCTCCCGGGGCTG CTTTGT CAGGCCCGGGTAC-GCA   GTACCGCTCCGAGAG  59 72
 GF1_RS04260 NONE
 GF1_RS04255 NONE
 GF1_RS04250 NONE
 GF1_RS04245 NONE
        mshL  982125 ..  982138 -  -3.8  -2.64616   TGCTCATCTACAGTA               CCTG CAACCT CAGG                ATGATGACCAGTTCC  43 4
 GF1_RS04235 NONE
 GF1_RS04230  980310 ..  980328 -    -3  -2.70932   TTTTCCGGGGAATGA             TGGCCTGA ATA TCAGGACG             TTCAAGGCCCACCAT  41 27
 GF1_RS04190  971094 ..  971125 - -23.2  -4.66833   CTGGAAGCTGAAAAA      GCCTGCTGACAAGC CATG GCTTGTCAGCAGGC       TTTTTTGTCTTGAAG 100 123
         cls  961308 ..  961334 -  -2.9  -4.89852   TGAGAGCGAGAAAAA         CGAGCGAATCA CAATC TGAACCGTTCG         CCGTTTCTATTTTTC  74 153
 GF1_RS04090 NONE
 GF1_RS04085  951281 ..  951297 -  -6.5  -2.94099   GTTTTTGAGGACAGA              GCGCCGT TCG ACGACAC              GGTACTTGATGTTGC  52 146
 GF1_RS04080 NONE
 GF1_RS04075  948286 ..  948306 -  -4.1  -4.58395   CTGACCTGTGAAAAA            TTTTCAAAG TGG CCTTAAAAA            TCCAACGGACTCTTC  67 114
 GF1_RS04070  947998 ..  948021 -  -6.8  -2.70932   CGGTGTTGCCAAGGA          TG-GAGATCAC CTC GTGATCCCGCA          GCCAGGCAAGGGTTT  53 8
 GF1_RS04065 NONE
 GF1_RS04060 NONE
 GF1_RS04055  946631 ..  946644 -  -3.7  -3.57561   CGGGAAGCTGTGAAA               GCGGC TCAT GCCGT                TTTTCATGTGCAGCA  53 29
 GF1_RS04050  945960 ..  945971 -  -4.4   -2.5806   AAATGGCCGGACAAG                GAGA TGCT TCTC                 GATACCGCCGGAGGC  45 76
 GF1_RS04040 NONE
 GF1_RS04035 NONE
        ppk2 NONE
        ppk2  941354 ..  941365 -  -2.2  -2.76815   ATCTTTCGGAATAAT                CGACG GTT CG-CG                GGCCGGATCGACCGG  39 66
 GF1_RS04020  940850 ..  940874 -   -15  -6.01187   AATGAAACAAAAAAA         CCCGC-CCGGG GATT CCCGGAGCGGG          TTTTTTTAACCTGTC 100 57
 GF1_RS03980  932997 ..  933012 -  -4.7  -3.07113   GATCAGGTTATTCAA              TGTCC TTGATT GGACA               GTAAAGCTGTCATGT  48 64
 GF1_RS03975 NONE
 GF1_RS03970 NONE
 GF1_RS03965  929864 ..  929884 - -12.6  -5.61596   ATGCTCATAAAAAAA            GGACAGGC TCCAT GCCTGTCC            CCCTCGAACAACGGA 100 53
 GF1_RS03960 NONE
 GF1_RS03955  928021 ..  928044 -    -8   -2.5934   TCTGAAAGTACGAAT          CGGCGGTCCA GTGA TGGGCCGCCT           TTTTTTGTTCCACGA  56 60
 GF1_RS03945  926263 ..  926284 -  -8.7  -2.90496   CCGTTTTTTAAAGTA           TGGGTCTCT TGGC AGAGACCCT            GGATGCTATCCGATC  61 31
 GF1_RS03940 NONE
 GF1_RS03935 NONE
 GF1_RS03930  922859 ..  922885 -  -3.5  -3.72576   GCGTTTTCTATGAAA         GTCGCGTCCCG CCTTT CTGGGGGCGAC         ACTTTTCATGTTTCG  56 141
 GF1_RS03925  920834 ..  920847 -  -3.8  -2.73994   ATGCTCGGAATATTA               CGCA TATGCC TGCG                CCTATTTTTTTTGAA  43 86
 GF1_RS03920  920025 ..  920035 -  -5.4  -3.27382   CCTGAAGAGAAGATA                 CCAA CGC TTGG                 CGCCACGGAGCCGGG  52 283
 GF1_RS03915  919154 ..  919182 -   -16  -4.88293   AACCTGAAAAACAAA        GGGGCCGCAGGA AGAAG TCATGCGGCCCC        GGGGAGAGTTGCGCT 100 381
 GF1_RS03910  918203 ..  918227 -  -3.5  -2.83112   AGGGAACTGATTACA          GGGCAGC CGATTTCCGGT GCCGCCC          TTGCCGCTGACGACA  43 127
 GF1_RS03905  917713 ..  917725 -  -5.5  -3.81027   CGCAAGGAACGTAAA                CCAGC ATG ACTGG                ACCAGGTAAGCGACC  61 162
 GF1_RS03890 NONE
 GF1_RS03885  914782 ..  914821 - -12.9  -4.19238   CTGTCAACCGGAAAA  TGAACCAGGGCCGCAGGA AAAAA TCC-GCGGCCCTGGTGGA  AGATCAGATTACCTT 100 34
 GF1_RS03880 NONE
 GF1_RS03875 NONE
 GF1_RS03870 NONE
 GF1_RS03865 NONE
 GF1_RS03860  911774 ..  911791 -  -5.5  -2.98823   CGCGCTGCAGATAGA             GACCGGT AATT ACCGACC              GCCGCCACCGCAGGT  50 17
 GF1_RS03855 NONE
 GF1_RS03850 NONE
 GF1_RS03845  909905 ..  909918 -  -3.1  -4.82901   GCCGGCGGACAAAAA               CAGAA ATGT TTCCG                TTGCCATGCTGGATC  73 288
 GF1_RS03810 NONE
 GF1_RS03805  900299 ..  900312 -  -2.4  -3.05844   GTTTTCACTTGAACA               CCTT TCCCTC AAGG                GTTACCATCGTGCCC  42 1
 GF1_RS03800 NONE
 GF1_RS03795 NONE
 GF1_RS03790  896886 ..  896897 -  -3.6  -3.35371   GACAGGTGGAATGAA                GGAC ATCG GCCC                 CATCCAGCTGACATC  49 43
 GF1_RS03785 NONE
 GF1_RS03780 NONE
       fdh3B  893042 ..  893073 - -14.4  -3.64703   TCTGGTTCAGGCAAA      GGCGGCACCCTTCC CATT GGAACGGTGCCGCT       GGTCTTGATGGAACG 100 43
 GF1_RS03770  891932 ..  891955 - -15.2  -5.14563   CTCCGTAGGAAAAAA          GGCGGGCCCC CTTG GGGGTCCGCC           TGGTGTTTTTTTGAA 100 65
        mobB NONE
 GF1_RS03720 NONE
 GF1_RS03715  880294 ..  880328 -  -2.8  -4.66609   CATGGTACGGAAAAA     CAGACGGGATAG CGGGGAATAAC CCATCCCGCCAG     CGGGTAACTGCTCTA  68 38
 GF1_RS03690  874305 ..  874329 - -16.5  -5.75342   GTTGCGCAAAAAAAA          TCTGGGGCAGC CAG GCTACCCCAGA          TCGCTGGTTCAGGCA 100 47
 GF1_RS03685 NONE
 GF1_RS03680  872001 ..  872024 -  -4.4  -2.61727   ATTTATGACAATCCA          TCCCGG-CGTC CAC GTCGTCCGGGG          GATCTCCATGGGTTG  45 81
 GF1_RS03675 NONE
 GF1_RS03670  870369 ..  870388 -  -3.6  -2.92475   CGTACTGTCACAAAT            GTTCA-CGG TTA CCGGTAAAC            CGTTGACGGTTGGTC  45 97
 GF1_RS03665 NONE
        lpxB  867379 ..  867392 -  -5.2  -3.36327   CGAGCGCATCGATAA               CCGG ATGATA CCGG                TCATGCGCGAGGCCA  54 428
 GF1_RS03645  865543 ..  865561 -    -3   -4.0828   AGGCAAAACAGGAAA             CCCATAAC CTG GTGGTGGG             GTACATACTCTGGGC  58 400
 GF1_RS03625  861822 ..  861839 -  -6.9  -3.72576   TCCGCCCGGAGGAAA             CCAGGCG GCGT CGCCCGA              AGCCGTGGATAGTTC  66 44
 GF1_RS03615  858824 ..  858834 -  -2.4  -3.68351   TCTTCAGCATTGAAA                 CCGG TGT CGGG                 CCTCGCTTGTTTCAC  49 175
 GF1_RS03610  857096 ..  857112 - -12.3  -2.89881   CATCCAGGCCACAGA              CACCCGT GAA ACGGGTG              AGGCCGACACCTTCA  78 361
 GF1_RS03605  856394 ..  856413 -  -2.9  -2.87564   CTACCCGCCCATACA            GTC-TGAC TGTCT GTCAAGAC            GGGGCCTACCTTACT  42 262
 GF1_RS03600  856020 ..  856038 -  -5.2  -4.58283   GAAGCTGTGGAAAAA             GCCGTGCA GGC TACACCGC             AGACTGAGACAGCTG  75 299
 GF1_RS03560 NONE
 GF1_RS03530  838634 ..  838651 -  -6.3   -4.0641   TCGCATTCATATAAA             GAGCTCA GCCA TAAGCTC              GATGCATCGTACAAT  68 235
 GF1_RS03525  837618 ..  837653 -   -32  -5.61596   ACTTTCATAAAAAAA    GCGGGCCGCGCCGGAT AATT ATCCGGCGCGGCCCGC     AGGCTGATTTTTTTC 100 51
        cdaA NONE
 GF1_RS03500 NONE
        glmM  829093 ..  829130 -  -3.9  -4.13767   GCGCTGATGCGAAAA   GGTCTCAGGCCGG-CTCC ACA GGTGACCGCCCCGGGACG   GTGTCGCCGCGGCCA  60 43
 GF1_RS03460 NONE
 GF1_RS03455  820516 ..  820528 -  -4.7   -3.5393   AGCAGCGGCGGTAAA                GGGTC ACT GCCCC                TTTTAAGGCCTCTAA  53 42
        selB  818361 ..  818386 - -16.1  -2.88069   GCCACAGGAGAAGGA         GCCCGTGGTCG TTTA CGTCCACGGGC          TTGGACAGAGAGGCC 100 88
 GF1_RS03425 NONE
 GF1_RS03420 NONE
 GF1_RS03415 NONE
 GF1_RS03410  808800 ..  808832 -  -5.6  -4.37886   CGACCCGGCAGAAAA     TATCTGCCGCGGGAAG TTC CCTCCCGCGGT-G-TA     CTCCCTTTCTTTTAC  70 127
 GF1_RS03395  805094 ..  805124 - -10.4  -3.22306   AAACAAGAGAGCCAA       GGCCAGGACAAAGA TTT TTTTCGTCCAGGCC       GACAGCGGTCCGGCA  70 89
 GF1_RS03390  804832 ..  804861 - -12.8  -3.62775   ACTACTTGGGAATAA       CCGCCGCCACCG GGTGAT CACTGGCGGCGG        CATGATGTTCGAGAA  88 123
 GF1_RS03385  803146 ..  803172 - -13.7   -5.9873   GGATGACAAAAAAAA         CCGGTTCCACC GCAAG GGGGGAACCGG         TTTTTTCGGGCTGCA 100 53
 GF1_RS03380 NONE
 GF1_RS03375  799907 ..  799920 -  -2.3  -3.53012   CCGGCTCGCTGGAAA               CGGCT GCTC AGTCG                CAGGGAGGGCAGATG  47 161
 GF1_RS03370 NONE
 GF1_RS03365  796200 ..  796211 -  -2.2   -3.1585   CCAGGTAAGCGAAGA                CTCC GGGA AGAG                 GCCCATTGATTGGAG  43 197
 GF1_RS03360  794774 ..  794784 -    -4  -4.29738   GTATACCTATGAAAA                 TGAA GAG TTCA                 GGAGCATTGTCCCCA  65 117
        arsB  790307 ..  790320 -  -3.7  -4.16943   CCGGACATGGCAAAA               CAGCG ACCA CGCAG                CCGCCCTTGTCCGTG  62 42
 GF1_RS03340  789656 ..  789711 - -10.6  -3.60627   TCACGGGACGCCAAA CCCGTCCCGAGGGGCTTGACTGTGGCC ATCCA GGCCACAGAC-A-CCCCT-GAAACGGA TGGGGCCGACACCTT  81 112
        phnD NONE
 GF1_RS03270 NONE
 GF1_RS03265  771076 ..  771086 -  -2.6  -4.85177   AAATTACATGAAAAA                 TTTT AGA AAAA                 GCGACGGGAGGGGCG  68 78
 GF1_RS03260 NONE
 GF1_RS03255 NONE
 GF1_RS03250 NONE
 GF1_RS03245  765148 ..  765196 - -17.5  -3.61517   ACCGCTGCTCAATAA CAGGAAACGGGCTGTTCCATGGA ATA CCCATGTACCCACCCGTTTCCTG TCCATACGCCACAAA 100 94
 GF1_RS03240  764352 ..  764375 -  -5.4  -2.59564   TGGGTACTGCAGAAC          TGATCAGGTCA AGT TGA-CTGACCA          TCACTGCCGGGCAGT  47 334
 GF1_RS03220  761541 ..  761553 -  -6.2  -3.30124   CGGCATCGGCCACAA                GGCC GTCGA GGCC                GGCTACAAGGTCCTC  54 355
 GF1_RS03205 NONE
 GF1_RS03200  756754 ..  756766 -  -3.3   -3.5944   ACCCACATTTCCAAA                CCGCA TTC TGCCG                GGCACATCGTACAGG  51 264
 GF1_RS03185  753054 ..  753097 -  -3.7  -2.57211   ATTTTTCTCCATAAT TGGATTGTCCGGGGGGAAA TCTCTG CTCCCCCCCGGACCAGTTA CTTACTGGTTAAACT  43 34
 GF1_RS03180  752419 ..  752430 -  -5.8  -2.52516   TGTTGCATTACCAAT                CCTG GCTG CAGG                 TTTCCTTCAGGATAA  49 6
 GF1_RS03165  749340 ..  749352 -  -6.2  -3.30124   CGGCATCGGCCACAA                GGCC GTCGA GGCC                GGCTACAAGGTCCTC  56 355
 GF1_RS03135  743389 ..  743417 -  -5.2  -4.07568   GCCTTCTCCGGAAAA       TGCGGTCGCCCTC ATCT GCGGGCCACC-CA        TCATGATCAGGTTCA  64 264
 GF1_RS03065  729653 ..  729665 -  -2.7  -3.07655   GGGCGGAAAAAATAC                CATAC ACG ATATG                ACGCTTAGATTTAAA  43 96
 GF1_RS03060 NONE
 GF1_RS03055 NONE
 GF1_RS03050  726378 ..  726409 - -13.7  -3.54459   TCAAGGGGTTTGAAA      GTCCGGACTGGGA AGAGAA TCCCAGCCCGGCC       AATCATAATGAATAT  83 502
 GF1_RS03025  720435 ..  720447 -  -4.8  -2.62192   GGTGATGGAAGGAAT                TCCC TCCAC GGGA                TTTTATCATATCATC  43 390
 GF1_RS03005  713939 ..  713969 - -11.3  -4.55016   ACAAAAAACTCAAAA      CT-CGTGATCACCGC CCC GCGGTG-TCACGCAG      GTGACCGGACGCTAC 100 37
 GF1_RS03000 NONE
 GF1_RS02995  709953 ..  709965 -  -2.6  -3.06501   CACAGGTTCAGGCAA                GCGG CAGCT CCAC                GGTAAAACATGCACC  42 5
 GF1_RS02990 NONE
 GF1_RS02985 NONE
 GF1_RS02980 NONE
 GF1_RS02975 NONE
 GF1_RS02970  701654 ..  701672 -  -5.8  -3.68351   TCGGGACCATCGAAA             CCCTGGCC GCG GTCCGGGG             AGCGGTGCTGGCCGT  58 185
        pyrE NONE
 GF1_RS02930 NONE
 GF1_RS02925  693363 ..  693379 -  -2.2   -3.4811   GGGTCTATAACAAGA              TGGATC TGCTC GATCCC              CAGACCCGTGCGCAG  46 169
 GF1_RS02890  686762 ..  686782 - -11.9  -6.04419   AAAATAACAAAAAAA            GGTTCGAAC GGT GTCCGAACC            TTGAAGTGTCAGTGG 100 38
        rplM NONE
        rpsI  685796 ..  685821 - -14.9  -5.89921   ATCACAATAAAAAAA         GGGAATAACGA AGCA TCGTTATTCCC          TTGAACACGCAAAGT 100 83
        argC NONE
 GF1_RS02870 NONE
 GF1_RS02865 NONE
 GF1_RS02860  683012 ..  683022 -  -2.4  -3.18945   TTTATTGAGAATATA                 GGGC ATG GACC                 GTAGGCGGCAGTAGA  43 124
 GF1_RS02855 NONE
 GF1_RS02850 NONE
 GF1_RS02845  678418 ..  678440 - -10.5  -3.53012   TGGCCCTGGTGGAAA           CCAGCCGGC GGAGT GTCGGCTGG           GGGGTCCTGGCGGCC  71 450
 GF1_RS02810  672170 ..  672186 - -12.3  -2.87344   CATCCGGGCCACAGA              CACCCGT GAA ACGGGTG              AGGTCAACACCTTCA  78 79
 GF1_RS02800  669735 ..  669749 -    -7  -3.53012   CCGGGGCGGTGGAAA               GCTGGC CTT GCCGGC               AGGACCACACCCGGG  61 60
 GF1_RS02795  668774 ..  668801 - -12.6  -3.15663   ATCGAGCGTTAGTAA        TCCCGGCCCTGG TCCG CCAGGGCCGGTT         GATCCATAAAGCGGG  81 42
 GF1_RS02745  652670 ..  652686 -  -3.6  -2.79878   GGGACGTATCGAAAC              CCGGAG TCTCC CTTCGG              TCGCTTACCTGGTCC  43 53
 GF1_RS02735 NONE
 GF1_RS02730 NONE
 GF1_RS02725 NONE
 GF1_RS02720 NONE
 GF1_RS02715  648000 ..  648010 -  -6.8  -3.61398   GCTTTTTGTGAAGAA                 CACG TTT CGTG                 ACTACAGTGTTGCGC  60 401
 GF1_RS02660  632413 ..  632434 - -15.1  -5.66338   AAACAGAACAAAAAA           CGGCGGACC GTCA GGCCCGCCG            TCAGAGTTTATGGCT 100 58
 GF1_RS02655  631405 ..  631419 -  -8.6  -2.78798   ATCTGTCATGGAAAG               GGAAAC AGT GTTTCC               AGATCAGCTGGTCGT  60 29
 GF1_RS02650  629539 ..  629554 -  -2.4  -4.11484   TGCAAGGCCTGAAAA              CACCGC GCCT GCTGCG               TCACAGCTTCAAAAA  56 262
 GF1_RS02645  627966 ..  627978 -  -5.5  -4.73108   GGGAGAAAAGGAAAA                CTGCC CAA AGCAG                GATTTTCGACTTTCT  75 390
 GF1_RS02640 NONE
        tnpB  626789 ..  626801 -  -3.4  -5.00616   TTTTTCTGCAAAAAA                GTGT GCTTT ACAC                CACCAATTCATAGCG  74 20
 GF1_RS02630  625146 ..  625157 -  -2.2   -3.5764   AATCCCATTTTGAAA                CTGC TTGA ACAG                 TAACCGCTAATTAAT  49 36
 GF1_RS02625  623163 ..  623174 -    -3  -5.27477   ATGTCAAGTAAAAAA                TCAA GTTC TTGA                 GAAAAAATTATGTTG  82 135
 GF1_RS02620 NONE
 GF1_RS02615 NONE
        tnpB  621586 ..  621598 -  -3.4  -5.00616   TTTTTCTGCAAAAAA                GTGT GCTTT ACAC                CACCAATTCATAGCG  74 20
 GF1_RS02605 NONE
 GF1_RS02600  618933 ..  618943 -  -3.2  -3.93782   TCACCGAATATGAAA                 CCCA AGA TAGG                 GCGTTTTCAATGATC  55 349
 GF1_RS02590  617685 ..  617703 -  -2.3  -4.57569   TCACGGGCCGAAAAA            CCGCAAGC GAGC GCA-GCGG             TTTTGAGGTCCCGTG  63 120
 GF1_RS02585 NONE
 GF1_RS02580  616784 ..  616808 -    -5  -3.48395   ATCCCTTTCACAGAA         CTGGCTCCAGG ATAC CCTTGAGC-AG          GTGTTTGGCCCGGAA  53 216
 GF1_RS02545  605439 ..  605449 -  -2.4   -4.1891   GTCTCTCAACAGAAA                 CAGG GTA CCGG                 CGCGGTGTTTGTTTC  58 119
 GF1_RS02540 NONE
        lysS  602635 ..  602647 -  -4.8  -3.75295   GACAAACCACTCAAA                GGAC ATTGA GTCC                GTTATTCTCCGGCTT  58 27
 GF1_RS02530 NONE
 GF1_RS02525 NONE
 GF1_RS02520  600569 ..  600580 -    -3  -3.36518   GGAAAATCGTGATAA                TCAA TCAG TTGA                 TTTAAGAATATCAGG  47 151
 GF1_RS02515 NONE
 GF1_RS02510  598607 ..  598634 -  -7.6  -2.89607   GGAAAATACCAAGGA        GGCCACGCTCAG GGAA CTGACCCCGGCC         CGGGTCACCGGTACG  56 248
 GF1_RS02475 NONE
 GF1_RS02470  591447 ..  591461 -  -2.8  -4.08285   GAGAAAAAAGCGAAA               CAGC TGGTCAT GCTG               GGCTCGAAGGTGAGT  58 257
        eutB  588790 ..  588800 -  -6.8  -3.30038   TACATCTAAATTCAA                 CCTG AGT CAGG                 TTATACTTTCACGGA  59 210
 GF1_RS02460 NONE
 GF1_RS02455 NONE
 GF1_RS02450 NONE
 GF1_RS02445 NONE
 GF1_RS02440 NONE
 GF1_RS02435  582086 ..  582120 -  -3.3  -4.62471   GGGAACTCGGAAAAA    GGCCGGCGGCAGTGGC CTTG GCCTG-GCCGCGGTCC     GGGCCATCATGGAGG  69 129
 GF1_RS02410 NONE
 GF1_RS02405 NONE
 GF1_RS02400  575631 ..  575649 -    -3  -4.11183   GCCTACGAGAAATAA             CAGCAGAC GCG GGCTGCTC             CGGGCAGCAGTTCCA  58 111
 GF1_RS02390 NONE
 GF1_RS02385  573691 ..  573721 -   -27  -2.63301   CATAGGGTGATACGA       GCAGGGGCGAGGTG ATC CACCTCGCCCCTGC       TATTTTTTTATGAAC 100 25
 GF1_RS02275 NONE
 GF1_RS02270  546661 ..  546690 -  -6.3   -3.0264   AAATCCCGGGGAACA       GGCTGGAGCCCGA CTTT TCGCGCTTCAGGC        AGAGCTTGCGAGTTA  53 38
 GF1_RS02265 NONE
 GF1_RS02260  541925 ..  541949 -  -2.9  -4.09243   GATACTGCGTCAAAA         TTCG-GCTCA GGTAAG CGAGCTCGAA          GTCTGCGCTTATCTG  58 203
        yhbY  541427 ..  541478 - -15.1  -2.83082   AAAAATCGGAGTACA GTGGACCTGCGCAGGCCGGGGATG ATGGG CAACGCCGGCCGGCGCAGGTC-AG GGTCCTGTTCCTGGT  90 55
 GF1_RS02250  540548 ..  540571 -  -2.5  -4.15044   CTGTCCGGGAACAAA         CCTTCTGTCCG CACG CGGAC--AAGG          TTTTTGTCCTGATCC  58 66
 GF1_RS02245  539338 ..  539382 - -26.6  -2.62396   TACCGGTTGACAGCA GTGGCGCGCAACGTGAG-CGC CGGG GCGGCTCACGTTGCGCGCCCC GTTTTGGTCCGCAGG 100 156
 GF1_RS02240  538809 ..  538823 -  -2.7  -2.66316   GCGTCCATCAGAGCA               CCTCC TCACC GGTGG               TGATGGCCTGCATGG  40 3
 GF1_RS02235 NONE
 GF1_RS02230 NONE
 GF1_RS02225  532624 ..  532645 -  -7.3  -4.23615   ACTATATTGAAGAAA           CAGCGCAGTC TCT GACCGC-CTG           GGAATTCAAATGGAA  71 255
 GF1_RS02180  522496 ..  522520 -  -5.8  -3.44998   CACCGATGAAGAATA         TCGTCCGCAGGG TAC CCCTG-GGA-GA         GGATCTTGTCCTGGC  53 175
 GF1_RS02100  507819 ..  507837 -  -5.2  -4.58283   GAAGCTGTGGAAAAA             GCCGTGCA GGC TACACCGC             AGACTGAGACAGCTG  75 496
 GF1_RS02085  502739 ..  502754 -  -2.6  -5.06414   CTTGCCGAACAAAAA              GC-TCAA ACC TTGAAGC              GGGCCATCATTTTCT  74 12
 GF1_RS02005  485092 ..  485108 -  -3.7  -3.03701   CGGCATGAAACGACA              GGGAA GGCGGTT TTCCC              GGAGAAAAAACCGAA  46 126
 GF1_RS01960 NONE
 GF1_RS01955  469302 ..  469316 -    -5   -4.2679   GAAGTTGTATGAAAA               TCACCA AGA TAGTGA               CAGTGTGCGTATGAA  64 352
 GF1_RS01950  466314 ..  466331 -  -6.9  -2.56343   ATGCGAAGGATTAAT             CCCTCTC TTCA GGGAGGG              CGGATTCCTGGTGAG  52 3
 GF1_RS01940  464396 ..  464410 -  -5.7  -3.17075   GGTCTGGTAAGCGAA               CGAAG AGAGA CTTCG               AATCCTTGCTATACG  52 34
 GF1_RS01915  458090 ..  458128 - -19.6   -5.9873   GCAGGACAAAAAAAA   GAGCGGGTAGCTCCTGGA AGA TCCAGGAACCGCCCGCCC   GGGTGAGAAGGTAGA 100 92
 GF1_RS01900  453010 ..  453028 -  -7.4  -2.53715   CCCAGGAGCAGGAAC             GGCTCAAG CAG CTCAAGCC             CGGGGCCGAATCACT  56 19
 GF1_RS01890  451159 ..  451178 -  -8.6  -3.71848   GTGGTGCACGAAGAA            TTCAAGGC CGTG GCCCTGAA             GAGAATCCTCCGCCT  69 452
 GF1_RS01865  444812 ..  444829 -  -5.5  -2.65264   CGATCAGGCAGATCA             GCTGCCC GGCC AGGCAAC              CCTTGGAGCCGCCGG  47 50
 GF1_RS01860  444462 ..  444474 -  -4.7  -5.40072   GTGGGTTCAAAAAAA                GCGGG AAG CCCCC                TGCTCCGGCGGACCG  90 64
        hemE NONE
 GF1_RS01850  442574 ..  442590 -  -5.8  -2.55015   ACCGCAGGTAAGCGA              CCGGAG GGAGA CTCCGA              TAGGCCCTCTATGCG  50 257
 GF1_RS01845  441141 ..  441163 -  -3.4  -4.15066   CACGGAGAAAGGAAA           CCAACAGGAC AGC ATCCTTTTGA           CAAGGTATGCACAGA  60 335
 GF1_RS01830  438125 ..  438141 -  -5.1  -4.62302   CAATACCTTGAAAAA              CCAGG GCTACAA CCTGG              AGCACAACTATGGAC  72 447
 GF1_RS01820  435455 ..  435495 -  -9.2  -2.72043   AACCTCCGTTGAAAT CAT-GACGCTCACCTCCTC GAAA GAGAAGGTAAACATCGATG  GAGGTGGTACACTTT  63 213
        istA NONE
        istB  433331 ..  433347 -  -9.4   -5.1383   AATAACATATAAAAA              CGCGAC TTCGT GTCGCG              ATTGTTAATGGCAAT  95 97
 GF1_RS01805 NONE
         ada NONE
 GF1_RS01795  429779 ..  429795 -  -5.8  -2.54896   GGCTCAGGTAAGCGA              CCGAAG GGAGA CTCCGG              GTAAGCGAGCTCGAA  50 207
 GF1_RS01790  429163 ..  429179 -  -2.9  -3.21925   ATAGCGTAGCATGAA              CTGCTGA CCG TCCGCAA              GGGCATCACCACAGG  45 84
 GF1_RS01785 NONE
 GF1_RS01780  427665 ..  427682 -  -3.5  -4.45024   ACAACAAAGAAACAA             CT-AGTTG CTG CAACTCAG             AAAGTTCAGCTTGAG  67 196
 GF1_RS01770  424655 ..  424685 - -11.3  -6.08342   CAACAAATAAAAAAA      CT-CGTGATCACCGC TCC GCGGTG-TCACGCAG      GTGACCGTGTAGCCG 100 433
 GF1_RS01765 NONE
 GF1_RS01760  420815 ..  420845 -  -2.5  -5.08824   GGTTCAGGGAAAAAA       TCCACCGGCTC ACCGCCCCG GAACCGGAGAA       CAACTCCTGAACCAC  74 50
 GF1_RS01750 NONE
 GF1_RS01745 NONE
 GF1_RS01740 NONE
 GF1_RS01735  413690 ..  413719 -  -7.8  -3.33696   CCTGTGCTGAAGGAA       GAAGCCACCCTC TCTGAT GCAGGCGGCTTC        AGAGATGTCCCCGGC  61 422
       rlmKL NONE
        yfcD NONE
 GF1_RS01715 NONE
 GF1_RS01710  406842 ..  406852 -  -6.8  -5.08824   GGGGGACGTAAAAAA                 GAGG TGG CCTC                 TTCAATCATCACAAC  90 203
 GF1_RS01635  388860 ..  388871 -  -4.4  -3.35522   GAATTCGCCGAAATA                TTCC ATCA GGAA                 TTCTCTGTTGTTACA  51 19
 GF1_RS01630  388240 ..  388253 -  -8.1  -2.59748   GATGCTCAGAAGCGA               CTGGC CAGC GCCAG                CCGGATGCCCAGGGC  56 2
 GF1_RS01625 NONE
 GF1_RS01620  386453 ..  386466 -  -2.4  -3.47573   TGAGGTACACCAGAA               GTAG ACTGTA CTAC                CTGGTTGTCGGTTTG  47 154
 GF1_RS01615  385453 ..  385465 -  -4.1  -3.41602   TGGATTTGATGATAA                CGGAT CAA ATCCA                CATGAAACAGCCAGA  49 48
 GF1_RS01610 NONE
 GF1_RS01605  382128 ..  382141 -  -6.7   -2.5547   ATCTGCCACAGGAAT               GTCCA CGGG TGGAC                GTGGCATGTTGGACG  52 62
 GF1_RS01600 NONE
 GF1_RS01595 NONE
 GF1_RS01590  378328 ..  378360 -  -5.5  -4.44974   TCAAAGTTCAGAAAA      CCGGAATTACGGAAC ATT ATTCCGCAAACACGG      ACTATATGTCTAGGA  72 27
 GF1_RS01575 NONE
 GF1_RS01570 NONE
 GF1_RS01565  361274 ..  361287 -  -2.4  -3.83026   CGTTCCCATATGAAA               CCTT TGGTTG AAGG                TCCCTTCCATCAGGG  51 35
 GF1_RS01560 NONE
 GF1_RS01555 NONE
 GF1_RS01550 NONE
 GF1_RS01545 NONE
 GF1_RS01540 NONE
 GF1_RS01535 NONE
 GF1_RS01530 NONE
 GF1_RS01525 NONE
 GF1_RS01520 NONE
 GF1_RS01515  349418 ..  349437 -  -7.8  -3.01712   GTTTTTCCGGGAATA            GGACCGGT GGTG ACCTGTCC             TTGCTGGACAGGGAT  59 257
 GF1_RS01500 NONE
 GF1_RS01495 NONE
 GF1_RS01490 NONE
 GF1_RS01485  342993 ..  343012 -  -2.8  -5.24129   GTGGCCGATAAAAAA            GCCCTGC GCCGCCA GC-GGGC            CCAGCTCCGTCAGGA  81 388
 GF1_RS01465  339264 ..  339297 - -15.5  -5.75478   AATCACATAAAAAAA     GGGTTTACAGGATAT CATG AAATCCTGTAAACCC      TGCAGTTTCGCTGGA 100 37
 GF1_RS01460  338434 ..  338452 -  -2.3  -4.59773   GGCCAGGCTCAAAAA             CACGCCG CTTTC CAGGGTG             ACCTGTTTTCTCGGC  66 127
 GF1_RS01415  326121 ..  326147 -    -8   -6.0427   AGGATACAAAAAAAA        CCGCGCGCGCCG CAGAT CGGC-CGC-CGG        TTGTTAAAATGTCAG 100 29
 GF1_RS01410  324738 ..  324775 -  -7.8  -4.18494   TAGGCCGAGGTAAAA   GGTGAAGTGATCCGCTT GAGAA AGGCCGATC-CTTCACC   GGAGACCTCCTTGAT  76 292
 GF1_RS01405  323571 ..  323594 - -14.6   -5.7946   TTGGGAACAAAAAAA          GGACCTGGCC TAAT GACCAGGTCC           TTTGCTGTTTTCTGG 100 38
 GF1_RS01390 NONE
 GF1_RS01385  318229 ..  318243 -  -4.3  -3.54475   GGTTGCAGTAGATAA               GTCAA GATCA TTGAC               TTGAATCTATCCTCT  53 80
        clpS NONE
        clpA  315358 ..  315385 -    -7  -2.65298   CTCAGGCACCACAAC        GGGGGACCTC TGTTATTG AAAGTCCCCC         CATTGCTTCTGCGAC  52 83
 GF1_RS01370  313129 ..  313147 -  -5.2  -4.58283   GAAGCTGTGGAAAAA             GCCGTGCA GGC TACACCGC             AGACTGAGACAGCTG  75 322
        pgeF  307875 ..  307891 -  -7.9  -3.14132   GCCGGTTCTCAGCAA              GCAGGCC AAT GCCCTGC              TCACCCGCCTTCCCA  57 486
        hisS NONE
        aspS NONE
 GF1_RS01295 NONE
        fabB  294115 ..  294143 -  -7.4  -4.61482   GCGGGTAAAAAAGAA       CCGTGCGCCCGGT GCGG ATCAGGCG-ACGG        TTTTTTTGAAGACCA  84 15
 GF1_RS01270  290284 ..  290297 -  -2.4  -2.71791   ATGTCTCCCTGAAAT               GGAT TTTCTC ATCC                GGCCAGGCCGGTGTT  39 46
 GF1_RS01265  288821 ..  288844 -  -3.1  -2.72028   TCCATCAGAAAAATG          GCTGCTTCT GTGTGG AGGAGCAAC           AAAGGGGGAGTACAG  41 108
 GF1_RS01260 NONE
 GF1_RS01255 NONE
 GF1_RS01250  285278 ..  285290 -  -4.9  -3.45324   TAGGTCGATTAAATA                TTTTG CTT CAAAA                ATGCAGGTCTCTTTT  51 322
 GF1_RS01240  283494 ..  283513 -  -2.8  -3.91084   GGACGGCCAATCAAA            GCAACT-GG CTG CCGAGATGC            GGCATAGCACCGATC  55 155
        nifH NONE
 GF1_RS01215 NONE
 GF1_RS01210 NONE
        nifD NONE
        nifK  274650 ..  274663 -  -3.8  -4.08945   ATTACCTCGGGAAAA               CAGG GGAACA CCTG                GCCTGCCGGAGTCCG  60 89
 GF1_RS01195 NONE
 GF1_RS01190 NONE
 GF1_RS01185 NONE
 GF1_RS01180 NONE
 GF1_RS01175  271670 ..  271694 - -14.3  -5.93809   GTGGGATAAAAAAAA          CCCCTGCCATT TCC AGTGGCAGGGG          GAGAACCGTACGGTT 100 111
 GF1_RS01170  270397 ..  270448 -  -8.1  -2.75844   GTGCTCACGGGAAAC GGACTTGCT-GT-CCAGGCCGGG GCGGAAAT CCCGGCCTGGCACCATCTAATCC TGGGTATAGGTGAAC  57 19
 GF1_RS01165 NONE
 GF1_RS01160  266455 ..  266469 -  -2.8  -3.96148   TGCTGCCAGGAGAAA               GGCA AGAGGTG TGCC               ATGTGCGCTTTTTGT  55 203
        nifE  265050 ..  265062 -  -4.1  -2.70932   TCTGGTTTTCAATTA                TTGCC GGG GACAA                AGCGCCATACCGGGC  43 6
 GF1_RS01150 NONE
        nifB  262201 ..  262255 - -22.3  -4.27117   TGTTCAGAACACAAA GGGGGCAAAGAACACGGGGGCAGCCG TGGT CTGCTGCTGC-GTGTTCTTTGCCCCC CTTCAACAATCAGGC 100 78
 GF1_RS01135  258995 ..  259011 -  -2.9  -2.89881   CATCCAGGCCACAGA              CACCCGT GCA ACAAGCG              AGGCCGACACCTTCA  42 118
 GF1_RS01130  258678 ..  258691 -  -5.9  -3.71848   CTGCGGCAGTAATAA               CCCGG CTGG CCAGG                GTCGTCATCGGCAGG  63 49
 GF1_RS01090 NONE
 GF1_RS01085  249355 ..  249374 -    -5  -3.69323   TTATTACCACTGAAA            TTCAGCCA TCGA TGGATGAA             GGTGTCGGGGCTTGC  55 181
 GF1_RS01055  242670 ..  242699 - -15.9  -5.22039   TTCAAACTGAAAAAA       GCGTTTTCATGCC TTGC GACATGAAAACGC        TTTTTGTTGCTCGGG 100 82
        hemC NONE
        cobA NONE
 GF1_RS01040  239326 ..  239371 -  -8.5  -2.57468   GTCGACCATATCAAG CAGCGGTTGGCCGTGTTTCGGC AGGAG GCCGAAAC-CGG--AACTGCTG GAGGGGTTACTGAAT  57 32
 GF1_RS01025  236805 ..  236818 -  -3.9  -3.32997   CCCGGAGAAAGGCAA               TACAA AAAA TTGTA                CTTTTTCTCCGTCAC  49 54
 GF1_RS01020  235739 ..  235751 -  -4.1   -3.2218   TTCAATACGGATGAA                GCAAA ATA TTCGC                CGCATTAGAGCATCA  47 314
 GF1_RS01015 NONE
 GF1_RS01010  232480 ..  232503 -   -16  -6.07627   ATGCCCAAAAAAAAA          CGGACCCACC AGAA GGCGGGTCCG           TTGTTCCTACACAGC 100 66
 GF1_RS01005 NONE
 GF1_RS01000  231884 ..  231899 -  -7.6  -3.53012   GGTCTGCTTGCGAAA              GTCTTC CGGC GAAGAC               AGGTCCAGGGTGTTG  64 149
 GF1_RS00995  230541 ..  230561 -  -4.6  -3.06696   CCTTTGTCGAACAGA            CGGAACCG GTGCG CAGGTCCG            TATCGCTCTACCAGC  47 490
 GF1_RS00985 NONE
 GF1_RS00980 NONE
 GF1_RS00975 NONE
 GF1_RS00970 NONE
 GF1_RS00965 NONE
 GF1_RS00960 NONE
 GF1_RS00955  221014 ..  221027 -  -2.3  -3.58726   CGGGTCCAGAGAGAA               CCGGT GGTC ATCGG                CATGCTCCTTTGCTG  49 19
 GF1_RS00950  220185 ..  220199 -    -5  -5.18371   CTGTACAAAACAAAA               GAAGAA TGA TTCTCC               GTCCACTATATCAGA  87 62
 GF1_RS00945 NONE
 GF1_RS00940 NONE
 GF1_RS00935 NONE
 GF1_RS00930  213643 ..  213657 -  -3.4  -5.29782   GAGATTGATAAAAAA               GGTCCG GGT CAGTCC               GGTATAGGCGATACC  82 327
 GF1_RS00920 NONE
 GF1_RS00915 NONE
 GF1_RS00910  209954 ..  209977 - -10.2  -3.53012   CCTTTGTGCTGTAAA          GCCCGGCAAG CCGT CCTGCAGGGC           GGTCAGTAGGCCATG  74 28
 GF1_RS00905  209194 ..  209204 -  -5.4  -4.38154   ATACCCGGCAGAAAA                 CAGT CCA ACTG                 TCAGATAGCTGACAG  70 83
        cooS  206734 ..  206756 -  -6.2  -4.82901   GCTGCTGGAGAAAAA           CGGCACCGAG GTT CTCTATGCCA           TCCATCCGGTGGCCG  82 503
 GF1_RS00870 NONE
 GF1_RS00865  198781 ..  198791 -  -2.4  -3.83026   TGGTGTCACATGAAA                 TCCG CTT CGGT                 CAGGGTAATGGCCTC  51 5
 GF1_RS00860 NONE
 GF1_RS00855 NONE
 GF1_RS00850  196457 ..  196487 -  -8.2  -3.01712   CTGGGGTCGGGAAGA       GGACGCCATGTTCT GGA AGATGATGGCGGCC       ATCGGCCTGGACCGG  56 404
 GF1_RS00840  195690 ..  195702 -  -4.7  -4.72986   TACGCTCAGGAAAAA                CCACC CTT GGAGG                AGCAGCCGGACATGG  72 3
 GF1_RS00830  194717 ..  194750 -    -6  -4.72272   CGGTTGGATGAAAAA    CGA-CAGGAGC-GGGC CAAG GCCCTGGCCCTGGTCG     GACAGAATCCGGAGG  82 89
        serS  191974 ..  191996 -  -5.6  -5.60993   GTCCTGACAAAAAAA           GCATGAAG TTTTTCT CTCCATGC           CCTTTTTGATGATGA 100 62
 GF1_RS00810  188316 ..  188346 - -19.1  -4.56597   CGTGCCGGGGAAAAA       GCTGGAGGCAGGA GCCGG TCCCGCCTCCAGC       TTACACTTTCGGTTT 100 42
 GF1_RS00805 NONE
 GF1_RS00800 NONE
        queC  185323 ..  185333 -  -3.2  -3.01791   AGGCTGTTGTCAATA                 GGAA AAT TCCC                 TGGCCGTTCAGCCAG  43 79
        rpsU  184996 ..  185017 - -12.3  -6.22691   GAAGAATAAAAAAAA           GGTCTGCCC GGCC AGGCAGACC            TTTTCCGTACTAGTA 100 35
        xerD  183978 ..  183994 -  -5.1  -2.89881   CATCCAGGCCACAGA              CACCCGT GAA ACAAGTG              AGGCCGACACCTTCA  49 96
 GF1_RS00770  181512 ..  181527 -  -3.2  -3.64703   TCGGGGTCATGGAAA              CGGG CTGTTTCT CCCG               GGTTGACTTGCGGCT  51 136
 GF1_RS00765 NONE
 GF1_RS00760 NONE
 GF1_RS00755 NONE
 GF1_RS00750  176786 ..  176800 -  -4.2  -4.51984   AAAAAAATAAAAATA               GAACAG ATC CTGGTC               TCTGACGGGACCGTG  67 134
 GF1_RS00695 NONE
 GF1_RS00690 NONE
 GF1_RS00685 NONE
 GF1_RS00680  159989 ..  160000 -  -5.8   -3.4252   TGCCATTGACGAGAA                TCCG ATCC CGGA                 TTCCACCCTGGGCTT  53 353
 GF1_RS00665  155821 ..  155842 - -15.9  -5.39721   CCAGGACATAAAAAA           GGGCAGACG TTTT CGTCTGCCC            TTTTTTTGTGCAGTG 100 48
        glgX  152073 ..  152086 -  -5.2  -4.39002   AAAGTGTGCATAAAA               CGCC TCCCGG GGCG                ATCTTGTTTGAGCTT  70 50
 GF1_RS00645  151445 ..  151463 -  -4.5  -2.99544   ATGAGGAATAAGAAT             CTCTTCC TGGCT GGAAGCG             CTATGCAGCAATAAT  48 97
 GF1_RS00640 NONE
 GF1_RS00635 NONE
 GF1_RS00630 NONE
 GF1_RS00625  148314 ..  148338 -  -9.4  -3.32844   GGCCGGAGTTGAGAA         CTT-CAGCTGC AACC GCAGCTGCAAG          AAAACTTGTATGTTA  69 244
 GF1_RS00605  141938 ..  141948 -  -6.8  -4.06904   GCAGGCAATTATAAA                 GGAC TTT GTCC                 GGATCATCACAGGAT  70 94
 GF1_RS00600  141333 ..  141360 - -15.6  -2.92003   AGAACATCCCACAGA        CCCGGTCAGGAA GTTT TTCCTGGCCGGG         TCTTTTTTTGGGGCA  95 167
 GF1_RS00580 NONE
 GF1_RS00575 NONE
 GF1_RS00570  133585 ..  133600 -    -4  -4.04174   GGCCAGAGAAGCAAA              GGGACTC CTG GA-TCCC              GAGGTGCTCGACTTT  60 288
 GF1_RS00560 NONE
 GF1_RS00555 NONE
 GF1_RS00550  129118 ..  129146 -  -2.3   -2.8805   ATGATCCCGGATATA        CCAGCGTGG ATGACCTGGTG CCCCGCCGG        AGCCCACCGTGTAGT  41 78
 GF1_RS00530  125076 ..  125101 - -20.5  -5.40474   ATGCGGCCAAAAAAA         GGCGCATGCCC GACC GGGCATGCGCC          GGTGGTCGGAGAGGT 100 64
 GF1_RS00495  114621 ..  114636 -  -7.5  -3.48024   CGGCAGGAGGAAACA              GCCGG CGCTTC CCGGC               AGGATGCTCAGTAGA  64 33
        rfbA NONE
        rfbD  109719 ..  109736 -  -3.3  -2.71011   ACGCCTTGGTAACGA             GGCC-ACG GGT CGAAGGCC             GGTGGAGCGGGCCCT  41 139
 GF1_RS00465 NONE
 GF1_RS00460  107512 ..  107528 -  -2.9  -2.71712   CTTTCCGGCTCAAAC              GAGCTGC TCC GCAAATC              CCTCACCTCACCCTA  41 161
 GF1_RS00450 NONE
        mutM  105081 ..  105124 -  -6.1  -4.56597   TTCCGGCCGCAAAAA GACCTACC-GG-GCAGGCGATA CCG TGTC-CCTGCACCTGGTCGGTC CCCTGGCCTGACCCC  74 186
 GF1_RS00395   94262 ..   94280 -  -7.4  -3.20878   GAACAGTGAAGGCAA             CCTGCC TTGAGCG GGCAGG             AGCGTTTTCGCGCAG  61 457
 GF1_RS00385   90886 ..   90896 -  -3.2  -2.70932   CTTCCTGGGTAATTA                 CTCC AGC GGAA                 AGAAGCAGTTCGCCA  41 199
 GF1_RS00380 NONE
 GF1_RS00375 NONE
 GF1_RS00370   86703 ..   86737 -  -9.3  -3.90744   GTCTCTGCTAAACAA    TTTGGGCCGGA-TCCA TTCC TGGAGTCCGGCCCATG     CTTTCCACGTTTCAG  78 290
 GF1_RS00365 NONE
 GF1_RS00360 NONE
 GF1_RS00355   82960 ..   82992 -  -3.5  -2.62192   GCTCAGGTAAGCAAG     CTCGAAGTCTGCGC TTATCT GCG-AAACTCCGAA      ATGCTCCTGCACTCC  43 116
 GF1_RS00350   81703 ..   81725 -  -2.8  -2.65532   ACGAGTTTAAATGTA           CTGTAAAAAA GTT TTTATTACAA           CCCGGTCAAGATCTG  40 20
 GF1_RS00345 NONE
 GF1_RS00340 NONE
 GF1_RS00335   78373 ..   78384 -  -4.4  -3.21772   AAGTTCTGCAGAAGA                TGCA GGCC TGCA                 GAAGTTTCAGCCTGT  49 378
 GF1_RS00325   76418 ..   76430 -  -6.2  -3.30124   CGGCATCGGCCACAA                GGCC GTCGA GGCC                GGCTACAAGGTCCTC  54 355
 GF1_RS00300   70356 ..   70386 -  -6.9  -5.63103   TCTGAATTAAAAAAA       GGCAGTGCGTC GGTGGTAAA AACACACTGCC       TGCCTTAATAATTTT 100 50
 GF1_RS00250   56840 ..   56871 -  -5.9  -3.02043   AAGGGCTGCCCAATA     CGGTGCTC-GAG-GC CATG GCTCTCAGAGTACCG      GTGGTGTCCACTGCT  49 256
 GF1_RS00155   34719 ..   34732 -  -4.5  -3.68988   CTGCAGGGAATACAA               CGCGGC TCA GCCG-G               TGATTTCTCTCTTCC  55 18
         hpt NONE
        elbB NONE
 GF1_RS00140 NONE
 GF1_RS00135   28951 ..   28986 - -19.8  -3.76641   ATTTTAAGACGGAAA    CAGCCCGTCATCCTGA AACA CCAGGGTGACGGGCTG     TTTTTGTTTCATGGC 100 135
 GF1_RS00110   21675 ..   21687 -  -5.5  -3.66732   CAATGATTCCAAGAA                GGAAC TGG GCTCC                CGGGTGGACCGGCAT  58 228
 GF1_RS00050    9681 ..    9705 -  -9.9  -3.73072   AAGCCTTCCATGAAA          CCGATGCCGGT CCC ACCGGCCTGGG          GCTGCCCTGGGTCCG  72 280
        hemG    2417 ..    2432 -  -4.6  -3.68222   TCTGAAGGCGAAGAA              CTGCCG GTGA CGGAAG               TTTTTTCCCTCTCCC   0 198
